BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010530
(508 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESS--FSVAFKMFDIDNNGEISKEEFKQ-VMAL 280
F FD N+DG + FKEY+ + + S +++ AF ++D+D NG ISK E + V A+
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQ-FMRNLYEEM 339
+ + + H L N P + + FFG+ +L ++F++ + N +E+
Sbjct: 129 FKMISPEDTKH---LPEDENT--PEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN--KEI 181
Query: 340 LRL 342
LRL
Sbjct: 182 LRL 184
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLH 473
+G +TR +FQ + +F+ FD+N DG L +E+V LH
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESS--FSVAFKMFDIDNNGEISKEEFKQ-VMAL 280
F FD N+DG + FKEY+ + + S +++ AF ++D+D NG ISK E + V A+
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQ-FMRNLYEEM 339
+ + + H L N P + + FFG+ +L ++F++ + N +E+
Sbjct: 129 FKMISPEDTKH---LPEDENT--PEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN--KEI 181
Query: 340 LRL 342
LRL
Sbjct: 182 LRL 184
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLH 473
+G +TR +FQ + +F+ FD+N DG L +E+V LH
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESS--FSVAFKMFDIDNNGEISKEEFKQ-VMAL 280
F FD N+DG + FKEY+ + + S +++ AF ++D+D NG ISK E + V A+
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQ-FMRNLYEEM 339
+ + + H L N P + + FFG+ +L ++F++ + N +E+
Sbjct: 129 FKMISPEDTKH---LPEDENT--PEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN--KEI 181
Query: 340 LRL 342
LRL
Sbjct: 182 LRL 184
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLH 473
+G +TR +FQ + +F+ FD+N DG L +E+V LH
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESS--FSVAFKMFDIDNNGEISKEEFKQ-VMAL 280
F FD N+DG + FKEY+ + + S +++ AF ++D+D NG ISK E + V A+
Sbjct: 70 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQ-FMRNLYEEM 339
+ + + H L N P + + FFG+ +L ++F++ + N +E+
Sbjct: 130 FKMISPEDTKH---LPEDENT--PEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN--KEI 182
Query: 340 LRL 342
LRL
Sbjct: 183 LRL 185
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLH 473
+G +TR +FQ + +F+ FD+N DG L +E+V LH
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 91
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESS--FSVAFKMFDIDNNGEISKEEFKQ-VMAL 280
F FD N+DG + FK+Y+ + + S +++ AF ++D+D NG ISK E + V A+
Sbjct: 69 FRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQ-FMRNLYEEM 339
+ + + H L N P + + FFG+ +L ++F++ + N +E+
Sbjct: 129 FKMISPEDTKH---LPEDENT--PEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN--KEI 181
Query: 340 LRL 342
LRL
Sbjct: 182 LRL 184
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLH 473
+G +TR +FQ + +F+ FD+N DG L +++V LH
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALH 90
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESS--FSVAFKMFDIDNNGEISKEEFKQ-VMAL 280
F FD N+DG + FK+Y+ + + S +++ AF ++D+D NG ISK E + V A+
Sbjct: 69 FRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQ-FMRNLYEEM 339
+ + + H L N P + + FFG+ +L ++F++ + N +E+
Sbjct: 129 FKMISPEDTKH---LPEDENT--PEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN--KEI 181
Query: 340 LRL 342
LRL
Sbjct: 182 LRL 184
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLH 473
+G +TR +FQ + +F+ FD+N DG L +++V LH
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALH 90
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIP--ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F FD N DG I F+E+I +++ S E AF M+D+D NG ISK E +++
Sbjct: 69 FRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 451 IFQVFDSNRDGNLSLEEFVR 470
IF+ D+NRDG LSLEEF+R
Sbjct: 152 IFRQMDTNRDGKLSLEEFIR 171
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 226 LFDMNNDGLISFKEYIFFVTLLSIP---ESSFSVAFKMFDIDNNGEISKEEFKQVMALMR 282
+FD + +G + FKE+I V+ S+ E AF+++D+D +G IS E QV+ +M
Sbjct: 46 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 105
Query: 283 SHN 285
+N
Sbjct: 106 GNN 108
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 226 LFDMNNDGLISFKEYIFFVTLLSIP---ESSFSVAFKMFDIDNNGEISKEEFKQVMALMR 282
+FD + +G + FKE+I V+ S+ E AF+++D+D +G IS E QV+ +M
Sbjct: 47 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 106
Query: 283 SHN 285
+N
Sbjct: 107 GNN 109
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 226 LFDMNNDGLISFKEYIFFVTLLSIP---ESSFSVAFKMFDIDNNGEISKEEFKQVMALMR 282
+FD + +G + FKE+I V+ S+ E AF+++D+D +G IS E QV+ +M
Sbjct: 60 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 119
Query: 283 SHN 285
+N
Sbjct: 120 GNN 122
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
+ F FD N DG I F EY+ ++L+ + FK++D+D NG I + E ++
Sbjct: 56 QMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115
Query: 280 LMRSHNR 286
+R+ NR
Sbjct: 116 AIRAINR 122
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 433 RAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLHNRE 476
RA R + + +++F D N DG LSLEEF+ + E
Sbjct: 118 RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDE 161
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 226 LFDMNNDGLISFKEYIFFVTLLSIP---ESSFSVAFKMFDIDNNGEISKEEFKQVMALMR 282
+FD + +G + FKE+I V+ S+ E AF+++D+D +G IS E QV+ +M
Sbjct: 61 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 120
Query: 283 SHN 285
+N
Sbjct: 121 GNN 123
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 17/140 (12%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
F D N DG +S++E FV+ E + FK DID NGEI EF + A
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEML 340
++ + + GL + + DG +L E+ F + E +
Sbjct: 65 VKEQDLSDE------KVGLKI---------LYKLMDADGDGKLTKEEVTTFFKKFGYEKV 109
Query: 341 RLEFAHYDYKQRGTISAEDF 360
+ D G I+ E+F
Sbjct: 110 VDQIMKADANGDGYITLEEF 129
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 224 FMLFDMNNDGLISFKEYIFFV--TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
F FD N DG + FKEY+ + T AF ++D+D NG ISK E +++ +
Sbjct: 77 FRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAI 136
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 451 IFQVFDSNRDGNLSLEEFVRVLH 473
+F+ FDSN DG L +E+V LH
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIALH 98
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 220 PSEF----FMLFDMNNDGLISFKEYIFFVTLLSIPE--SSFSVAFKMFDIDNNGEISKEE 273
PS F F +FD + +G I FKE+I +++ S E AF+++D+DNNG IS +E
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120
Query: 274 FKQVM 278
+++
Sbjct: 121 MLRIV 125
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLL--------------SIPESSFSVAFK 259
GEL F L+D++N+GLIS+ E + V + PE + F
Sbjct: 95 GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFN 154
Query: 260 MFDIDNNGEISKEEF 274
M D + +G+++ EEF
Sbjct: 155 MMDKNKDGQLTLEEF 169
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Query: 423 NGLLTRDDFQR---AAYRVCGILLT--------DNVIDIIFQVFDSNRDGNLSLEEF 468
NGL++ D+ R A Y++ G ++ + ++ IF + D N+DG L+LEEF
Sbjct: 113 NGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 220 PSEF----FMLFDMNNDGLISFKEYI--FFVTLLSIPESSFSVAFKMFDIDNNGEISKEE 273
P++F F +FD N DG I F E+I VT + AFK++D+DN+G I++ E
Sbjct: 61 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE 120
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 451 IFQVFDSNRDGNLSLEEFVRVLHNRER 477
+F VFD N+DG + EF++ L R
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSR 94
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 14/67 (20%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLL--------------SIPESSFSVAFKMFDIDNNGEI 269
F L+D++NDG I+ E + V + + PE F M D + +G++
Sbjct: 105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKL 164
Query: 270 SKEEFKQ 276
+ +EF++
Sbjct: 165 TLQEFQE 171
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
+ + FD N DG + F E+I V L+ E FK++D D NG I K E +
Sbjct: 61 QVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM 120
Query: 280 LMRSHNRQ 287
+++ N Q
Sbjct: 121 AVQALNGQ 128
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 223 FFMLFDMNNDGLISFKEYI-FFVTLLSI-------PESSFSVAFKMFDIDNNGEISKEEF 274
+F L+D + +G I E + F+ + ++ PE ++ F DI+N+GE++ EEF
Sbjct: 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
Query: 275 KQVMA 279
MA
Sbjct: 158 INGMA 162
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 448 IDIIFQVFDSNRDGNLSLEEFVRVLHNRERDIAQPV 483
I+++F D N DG L+LEEF+ + +++D+ + V
Sbjct: 137 INLVFHKIDINNDGELTLEEFINGMA-KDQDLLEIV 171
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 219 APSEF----FMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKE 272
+P +F F +FD +N+G I F+E+I ++ S E S AF+++D++++G I+ +
Sbjct: 60 SPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFD 119
Query: 273 EFKQVMA 279
E ++A
Sbjct: 120 EMLTIVA 126
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLL--------------SIPESSFSVAFK 259
G L S F L+D+N+DG I+F E + V + + PE FK
Sbjct: 95 GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK 154
Query: 260 MFDIDNNGEISKEEFKQ 276
+ D + +G I+ +EF++
Sbjct: 155 LMDKNEDGYITLDEFRE 171
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLHNRER 477
+G L R+DF + + ++ + +F VFD + +G + EEF+ VL R
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSR 94
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 37.7 bits (86), Expect = 0.017, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
F D+N DG +S++E FV+ E + FK D D NGEI + EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEML 340
+ QG D + GL V + DG +L E+ F + E +
Sbjct: 65 I-----QGQDLSDD-KIGLKV---------LYKLMDVDGDGKLTKEEVTSFFKKHGIEKV 109
Query: 341 RLEFAHYDYKQRGTISAEDF 360
+ D G I+ E+F
Sbjct: 110 AEQVMKADANGDGYITLEEF 129
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 37.7 bits (86), Expect = 0.017, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
F D+N DG +S++E FV+ E + FK D D NGEI + EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEML 340
+ QG D + GL V + DG +L E+ F + E +
Sbjct: 65 I-----QGQDLSDD-KIGLKV---------LYKLMDVDGDGKLTKEEVTSFFKKHGIEKV 109
Query: 341 RLEFAHYDYKQRGTISAEDF 360
+ D G I+ E+F
Sbjct: 110 AEQVMKADANGDGYITLEEF 129
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 344 FAHYDYKQRGTISAEDFALSMVA---SADMGHLNKLLNRVDQLKNERHLCDLRITFEEFK 400
FA +D GTI+ ++ M + + L ++N VD N I F EF
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 69
Query: 401 NFAELRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVF 455
+ + K Q L KV NGL++ + + + G LTD+ +D + +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEMIREA 128
Query: 456 DSNRDGNLSLEEFVRVL 472
D + DG+++ EEFVR++
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 32.7 bits (73), Expect = 0.55, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLLSI------PESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F++L++ E AFK+FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM 109
Score = 32.0 bits (71), Expect = 0.91, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 27/153 (17%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYF--FGEDGRARLQHEKFVQFMRNLYE 337
R Q + L+E F F DG + + M NL E
Sbjct: 74 --RKMKEQDSEEE-----------------LIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 338 EMLRLE----FAHYDYKQRGTISAEDFALSMVA 366
++ E D G I+ E+F MV+
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 344 FAHYDYKQRGTISAEDFALSMVA---SADMGHLNKLLNRVDQLKNERHLCDLRITFEEFK 400
FA +D GTI+ ++ M + + L ++N VD N I F EF
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 69
Query: 401 NFAELRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVF 455
+ + K Q L KV NGL++ + + + G LTD+ +D + +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEMIREA 128
Query: 456 DSNRDGNLSLEEFVRVL 472
D + DG+++ EEFVR++
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 32.7 bits (73), Expect = 0.55, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLLSI------PESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F++L++ E AFK+FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM 109
Score = 32.0 bits (71), Expect = 0.91, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 27/153 (17%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYF--FGEDGRARLQHEKFVQFMRNLYE 337
R Q + L+E F F DG + + M NL E
Sbjct: 74 --RKMKEQDSEEE-----------------LIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 338 EMLRLE----FAHYDYKQRGTISAEDFALSMVA 366
++ E D G I+ E+F MV+
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
F FD N D I F EY+ + L+ E FK++D D NG I ++E ++
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVES 123
Query: 281 MRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMR 333
+ + + + + G + P E + E+G +L +FV+ R
Sbjct: 124 IYKLKKACSVEVEAEQQG-KLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 175
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 440 GILLT-DNVIDIIFQVFDSNRDGNLSLEEFV 469
G LLT + V+D IF + D N DG LSL EFV
Sbjct: 141 GKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
F FD + +G I F++++ +++L AF ++DI+ +G I+KEE ++A+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEE---MLAI 190
Query: 281 MRS 283
M+S
Sbjct: 191 MKS 193
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F FD +++G +SF+++I +++L + + AF ++DI+ +G I+KEE +M
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIM 164
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 35.4 bits (80), Expect = 0.074, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGEISKEEFKQ 276
F D+N DG +S++E FV+ E + FK D D NGEI + EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 228 DMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEF 274
D N DG I+ E+ ++T L + ++ + AF D + NGE+S +E
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDEL 158
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRS 283
F FD + G I+ E + + K D DN+G+I EF A+MR
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEF---AAMMRK 144
Query: 284 HNRQGAFHRDGLRTGLNVK---GPVENGG--LVEYFF 315
G R +R LN++ G V+NG ++E +F
Sbjct: 145 RKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYF 181
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.0 bits (79), Expect = 0.093, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + DG I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGDGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
Score = 32.3 bits (72), Expect = 0.67, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D +G I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 117 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + DG I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 348 DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 402
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 379 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D +G I EF +MA
Sbjct: 306 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMA 365
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 366 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 408
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 409 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLLSI------PESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F++L++ E AFK+FD D NG IS E + VM
Sbjct: 56 DADGNGTIEFDE---FLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM 109
Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E + L + + K D+D +G+++ EEF ++M
Sbjct: 87 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMM 146
Query: 280 LMR 282
+R
Sbjct: 147 TVR 149
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ +E + L + E D D NG I +EF +MA
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 228 DMNNDGLISFKEYIFFVT---LLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + DG I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 357 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D +G I EF +MA
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 374
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
+ R+ R F +DG + + M NL E++
Sbjct: 375 RKMKYTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 417
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 418 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 26/193 (13%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 270 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 320
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD D I F EF
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD------GDGTIDFPEFLTMMA 374
Query: 405 LRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNR 459
+ K + +V NG ++ + R G LTD +D + + D +
Sbjct: 375 RKMKYTDSEEEIREAFRVFDKDGNGYISAAEL-RHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 460 DGNLSLEEFVRVL 472
DG ++ EEFV+++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 228 DMNNDGLISFKEYIFFVT---LLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + DG I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 387 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D +G I EF +MA
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
+ R+ R F +DG + + M NL E++
Sbjct: 374 RKMKYTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 416
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 417 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 315 FGEDGRARLQHEKFVQFMRNLYEEML---RLEFAHYDYKQRGTISAEDFAL---SMVASA 368
F EDG L H+ L EE + + F+ +D GTI+ ++ S+ +
Sbjct: 285 FKEDGNI-LGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP 343
Query: 369 DMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKV-----N 423
L ++N VD D I F EF + K + +V N
Sbjct: 344 TEAELQDMINEVDAD------GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 424 GLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
G ++ + R G LTD +D + + D + DG ++ EEFV+++
Sbjct: 398 GYISAAEL-RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 228 DMNNDGLISFKEYIFFVT---LLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + DG I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 387 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D +G I EF +MA
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
+ R+ R F +DG + + M NL E++
Sbjct: 374 RKMKYTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 416
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 417 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 315 FGEDGRARLQHEKFVQFMRNLYEEML---RLEFAHYDYKQRGTISAEDFAL---SMVASA 368
F EDG L H+ L EE + + F+ +D GTI+ ++ S+ +
Sbjct: 285 FKEDGNI-LGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP 343
Query: 369 DMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKV-----N 423
L ++N VD D I F EF + K + +V N
Sbjct: 344 TEAELQDMINEVDAD------GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 424 GLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
G ++ + R G LTD +D + + D + DG ++ EEFV+++
Sbjct: 398 GYISAAEL-RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + + E ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----------------ELDAII 62
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I E+
Sbjct: 63 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEI 121
Query: 364 MVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
+ A+ + H+ + + D +K+ D RI F+EF E
Sbjct: 122 LRATGE--HVTE-EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD N DG I +E I T + E K D +N+G I +EF ++M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + DG I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 356 DADGDGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 387 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D +G I EF +MA
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 374 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 416
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 417 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 269 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 319
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD D I F EF
Sbjct: 320 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD------GDGTIDFPEF--LTM 371
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 372 MARKMKDTDSEEEIREAFRVFDK-DGNGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 429
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 430 IDGDGQVNYEEFVQMM 445
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 228 DMNNDGLISFKEYIFFVTL-LSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVM 107
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 25/151 (16%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ + +R V F +DG + + M NL E++
Sbjct: 74 ------RKMKDSEEEIREAFRV-------------FDKDGNGFISAAELRHVMTNLGEKL 114
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M +
Sbjct: 115 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 31/162 (19%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + E ++
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKE-----------------ELDAII 59
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I AE+ A
Sbjct: 60 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEI 118
Query: 364 MVASADMGHLNKLLNRVDQL-KNERHLCDLRITFEEFKNFAE 404
AS + H+ ++ L K+ D RI F+EF E
Sbjct: 119 FRASGE--HVTD--EEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
+E F +FD N DG I +E IF + + + K D +N+G I +EF ++M
Sbjct: 96 AELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + + E ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----------------ELDAII 62
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I E+
Sbjct: 63 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 121
Query: 364 MVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
+ A+ + H+ + + D +K+ D RI F+EF E
Sbjct: 122 LRATGE--HVTE-EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD N DG I +E I T + E K D +N+G I +EF ++M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + + E ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----------------ELDAII 62
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I E+
Sbjct: 63 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEI 121
Query: 364 MVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
+ A+ + H+ + + D +K+ D RI F+EF E
Sbjct: 122 LRATGE--HVTE-EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
++ F +FD N DG I +E I T + E K D +N+G I +EF ++M
Sbjct: 99 ADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 223 FFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEF 274
FF D N D IS EY F +L + ++ +F D +N+G +S EEF
Sbjct: 99 FFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEF 150
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 31/162 (19%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + E ++
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKE-----------------ELDAII 59
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I AE+ A
Sbjct: 60 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEI 118
Query: 364 MVASADMGHLNKLLNRVDQL-KNERHLCDLRITFEEFKNFAE 404
AS + H+ ++ L K+ D RI F+EF E
Sbjct: 119 FRASGE--HVTD--EEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
+E F +FD N DG I +E IF + + + K D +N+G I +EF ++M
Sbjct: 96 AECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + + E ++
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----------------ELDAII 59
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I E+
Sbjct: 60 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 118
Query: 364 MVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
+ A+ + H+ + + D +K+ D RI F+EF E
Sbjct: 119 LRATGE--HVTE-EDIEDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD N DG I +E I T + E K D +N+G I +EF ++M
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.5 bits (75), Expect = 0.31, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + D+D +G+++ EEF QVM
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 32.3 bits (72), Expect = 0.58, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM 109
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
++ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEKLKEAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M+A
Sbjct: 117 TDEEVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 344 FAHYDYKQRGTISAEDFALSMVA---SADMGHLNKLLNRVDQLKNERHLCDLRITFEEFK 400
F+ +D GTI+ ++ M + + L ++N VD N I F EF
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 69
Query: 401 NFAELRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVF 455
N + K L +V NG ++ + + + G LTD +D + +
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
Query: 456 DSNRDGNLSLEEFVRVL 472
D + DG ++ EEFV+V+
Sbjct: 129 DVDGDGQVNYEEFVQVM 145
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 53/153 (34%), Gaps = 23/153 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVASA 368
E D G ++ E+F M A A
Sbjct: 118 TDEEVDEMIREADIDGDGQVNYEEFVQMMTAKA 150
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 54 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 107
Score = 32.3 bits (72), Expect = 0.64, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 31.6 bits (70), Expect = 0.95, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 72 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 114
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 115 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.5 bits (75), Expect = 0.33, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + D+D +G+++ EEF QVM
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 32.3 bits (72), Expect = 0.59, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM 109
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
++ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEELKEAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M+A
Sbjct: 117 TDEEVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 344 FAHYDYKQRGTISAEDFALSMVA---SADMGHLNKLLNRVDQLKNERHLCDLRITFEEFK 400
F+ +D GTI+ ++ M + + L ++N VD N I F EF
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 69
Query: 401 NFAELRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVF 455
N + K L +V NG ++ + + + G LTD +D + +
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
Query: 456 DSNRDGNLSLEEFVRVL 472
D + DG ++ EEFV+V+
Sbjct: 129 DVDGDGQVNYEEFVQVM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 33.1 bits (74), Expect = 0.33, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + D+D +G+++ EEF QVM
Sbjct: 84 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 142
Score = 32.3 bits (72), Expect = 0.59, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM 106
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 70
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
++ R F +DG + + M NL E++
Sbjct: 71 RKMKDTDSEEELKEAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 113
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M+A
Sbjct: 114 TDEEVDEMIREADVDGDGQVNYEEFVQVMMA 144
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 344 FAHYDYKQRGTISAEDFALSMVA---SADMGHLNKLLNRVDQLKNERHLCDLRITFEEFK 400
F+ +D GTI+ ++ M + + L ++N VD N I F EF
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 66
Query: 401 NFAELRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVF 455
N + K L +V NG ++ + + + G LTD +D + +
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 125
Query: 456 DSNRDGNLSLEEFVRVL 472
D + DG ++ EEFV+V+
Sbjct: 126 DVDGDGQVNYEEFVQVM 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
Score = 32.3 bits (72), Expect = 0.63, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.95, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 117
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 118 TDEEVDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
Score = 32.3 bits (72), Expect = 0.68, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 118 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 62 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 115
Score = 32.3 bits (72), Expect = 0.68, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 93 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 20 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 79
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 80 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 122
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 123 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 58 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 111
Score = 32.3 bits (72), Expect = 0.69, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 89 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 16 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 75
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 76 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 118
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 119 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
Score = 32.3 bits (72), Expect = 0.68, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 117 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
Score = 32.3 bits (72), Expect = 0.71, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 51/151 (33%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E +
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEXL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 118 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
Score = 32.3 bits (72), Expect = 0.71, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 51/151 (33%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E +
Sbjct: 74 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEXL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 117 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 110
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 118 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 117 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 52 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 105
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 83 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 141
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 69
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 70 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 112
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 113 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 143
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 109
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 L-MRSHNRQG-------AFHRDG--------LRTGLNVKGPVENGGLVEYFFGE---DGR 320
M+ + + F +DG LR + G V+ E DG
Sbjct: 74 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGD 133
Query: 321 ARLQHEKFVQFM 332
++ +E+FVQ M
Sbjct: 134 GQVNYEEFVQMM 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 60 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 113
Score = 32.3 bits (72), Expect = 0.68, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 91 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 18 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 77
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 78 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 120
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 121 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 53 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 106
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 84 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 70
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 71 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 113
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 114 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 54 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 107
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 72 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 114
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 115 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 33.1 bits (74), Expect = 0.36, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 54 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 107
Score = 32.0 bits (71), Expect = 0.74, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 72 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 114
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSM 364
E D G ++ E+F M
Sbjct: 115 TDEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 33.1 bits (74), Expect = 0.36, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 55 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 108
Score = 32.0 bits (71), Expect = 0.73, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 86 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 13 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 72
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 73 RKMKDTDSEEEIREAFRV-----------------FDKDGNGYISAAELRHVMTNLGEKL 115
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSM 364
E D G ++ E+F M
Sbjct: 116 TDEEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 33.1 bits (74), Expect = 0.37, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLS---IPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD N DG+I F E+ F + + + ++ A K D D NG I EF ++
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 32.7 bits (73), Expect = 0.44, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 228 DMNNDGLISFKEYIFFVT--LLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + AF++FD D NG IS E + VM
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVM 104
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 20/131 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 69
Query: 280 L-MRSHNRQG------AFHRDG--------LRTGLNVKGPVENGGLVEYFFGE---DGRA 321
M+ + + F +DG LR + G V+ E DG
Sbjct: 70 RKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDG 129
Query: 322 RLQHEKFVQFM 332
++ +E+FVQ M
Sbjct: 130 QVNYEEFVQMM 140
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 187 MRAIVPVFPPSESHLVRDGYLRGE-------RRPGELRCAPSEFFMLFDMNNDGLISFKE 239
+ A+ +F S ++ DG + E R F +FD+ +G+I F E
Sbjct: 36 VEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGE 95
Query: 240 YIFFVTLL--SIP-ESSFSVAFKMFDIDNNGEISKEEFKQ-VMALMRSHNRQGAFHRDGL 295
++ + + S P AFK++D+ G I +EE K+ V+AL+ H + D +
Sbjct: 96 FVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALL--HESELVLSEDMI 153
Query: 296 RTGLN---VKGPVENGGLVE 312
++ V+ +N G ++
Sbjct: 154 EVMVDKAFVQADRKNDGKID 173
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 395 TFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQV 454
T EE + EL +KL + +GL+ +++FQ A +R + D IF V
Sbjct: 32 TVEEVEALYELFKKLSSSIID-------DGLIHKEEFQLALFRNRN--RRNLFADRIFDV 82
Query: 455 FDSNRDGNLSLEEFVRVL 472
FD R+G + EFVR L
Sbjct: 83 FDVKRNGVIEFGEFVRSL 100
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 187 MRAIVPVFPPSESHLVRDGYLRGE-------RRPGELRCAPSEFFMLFDMNNDGLISFKE 239
+ A+ +F S ++ DG + E R F +FD+ +G+I F E
Sbjct: 36 VEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGE 95
Query: 240 YIFFVTLL--SIP-ESSFSVAFKMFDIDNNGEISKEEFKQ-VMALMRSHNRQGAFHRDGL 295
++ + + S P AFK++D+ G I +EE K+ V+AL+ H + D +
Sbjct: 96 FVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALL--HESELVLSEDMI 153
Query: 296 RTGLN---VKGPVENGGLVE 312
++ V+ +N G ++
Sbjct: 154 EVMVDKAFVQADRKNDGKID 173
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 395 TFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQV 454
T EE + EL +KL + +GL+ +++FQ A +R + D IF V
Sbjct: 32 TVEEVEALYELFKKLSSSIID-------DGLIHKEEFQLALFRNRN--RRNLFADRIFDV 82
Query: 455 FDSNRDGNLSLEEFVRVL 472
FD R+G + EFVR L
Sbjct: 83 FDVKRNGVIEFGEFVRSL 100
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 357 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 375 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 417
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 418 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 270 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 320
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEF--LTM 372
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFDK-DGNGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 430
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 431 IDGDGQVNYEEFVQMM 446
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD +N G IS E + + ++ D +N+GE+ +EF+Q++
Sbjct: 448 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 228 DMNNDGLISFKEYIFFV----TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
D + +G I + E++ TLLS AF+MFD DN+G+IS E + +
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLS--RERLERAFRMFDSDNSGKISSTELATIFGV 470
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 389 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 358 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 412
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 316 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 375
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 376 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 418
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 419 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 271 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 321
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 322 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEF--LTM 373
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 374 MARKMKDTDSEEEIREAFRVFDK-DGNGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 431
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 432 IDGDGQVNYEEFVQMM 447
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 375 RWMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 417
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 418 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 357 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 375 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 417
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 418 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 270 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 320
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEF--LTM 372
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFDK-DGNGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 430
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 431 IDGDGQVNYEEFVQMM 446
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD +N G IS E + + ++ D +N+GE+ +EF+Q++
Sbjct: 447 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 228 DMNNDGLISFKEYIFFV----TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
D + +G I + E++ TLLS AF+MFD DN+G+IS E + +
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLS--RERLERAFRMFDSDNSGKISSTELATIFGV 469
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 228 DMNNDGLISFKEYIFFVT---LLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
+ R+ R F +DG + + M NL E++
Sbjct: 375 RKMKYTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 417
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 418 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 26/193 (13%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 270 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 320
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFLTMMA 374
Query: 405 LRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNR 459
+ K + +V NG ++ + R G LTD +D + + D +
Sbjct: 375 RKMKYTDSEEEIREAFRVFDKDGNGYISAAEL-RHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 460 DGNLSLEEFVRVL 472
DG ++ EEFV+++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 214 GELRCAPSEFFMLF---DMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGE 268
GEL+ E + D + +G I + E+I I E AF +FD D +G+
Sbjct: 392 GELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGK 451
Query: 269 ISKEEFKQVMAL 280
I+KEE + L
Sbjct: 452 ITKEELANLFGL 463
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 32.7 bits (73), Expect = 0.48, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSM 364
E D G ++ E+F M
Sbjct: 118 TDEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 32.7 bits (73), Expect = 0.49, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 109
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEEIREAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 117 TDEEVDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 16/75 (21%)
Query: 226 LFDMNNDGLISFKEYIFFVTLLSIPES-------------SFSVAFKMFDIDNNGEISKE 272
LFD NNDG + E LL + E+ F+ AF+++D D NG I +
Sbjct: 155 LFDSNNDGKLELTE---MARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDEN 211
Query: 273 EFKQVMALMRSHNRQ 287
E ++ + N+Q
Sbjct: 212 ELDALLKDLCEKNKQ 226
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 427 TRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLHNRE 476
T DD + A Y D++ ++FDSN DG L L E R+L +E
Sbjct: 139 TVDDTKLAEY-----------TDLMLKLFDSNNDGKLELTEMARLLPVQE 177
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 32.7 bits (73), Expect = 0.50, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 11 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M +
Sbjct: 118 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 109
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 74 RKMKDTDSEEEIREAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 116
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M +
Sbjct: 117 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 32.7 bits (73), Expect = 0.54, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 75 RKMKDTDSEEEIREAFRV-----------------FDKDGNGFISAAELRHVMTNLGEKL 117
Query: 340 LRLE----FAHYDYKQRGTISAEDFALSMVA 366
E D G ++ E+F M +
Sbjct: 118 TDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 32.7 bits (73), Expect = 0.54, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM 110
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + D+D +G+I+ EEF +VM
Sbjct: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
Score = 28.5 bits (62), Expect = 8.4, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 15/137 (10%)
Query: 344 FAHYDYKQRGTISAEDFALSMVA---SADMGHLNKLLNRVDQLKNERHLCDLRITFEEFK 400
F+ +D G I+ ++ M + + L ++N VD N I F EF
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 70
Query: 401 NFAELRRKLQPFCLALFSYGKV-----NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVF 455
N + K L +V NG ++ + + + G LTD +D + +
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
Query: 456 DSNRDGNLSLEEFVRVL 472
D + DG ++ EEFV+V+
Sbjct: 130 DVDGDGQINYEEFVKVM 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 32.7 bits (73), Expect = 0.54, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
D + +G I F E++ + + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM 110
Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + D+D +G+I+ +EF +VM
Sbjct: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 351 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 410
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 320 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 374
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 278 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 337
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 338 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 380
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 381 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 233 FEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 283
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 284 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEF--LTM 335
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 336 MARKMKDTDSEEEIREAFRVFDKDG-NGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 393
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 394 IDGDGQVNYEEFVQMM 409
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 32.3 bits (72), Expect = 0.56, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLV 311
+ F AF MFD D G+IS +E VM ++ + + E ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----------------ELDAII 62
Query: 312 EYFFGEDGRARLQHEKFVQFM--------RNLYEEMLRLEFAHYDYKQRGTISAEDFALS 363
E EDG + E+F+ M + EE L F +D G I E+
Sbjct: 63 EE-VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 121
Query: 364 MVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
+ A+ + H+ + + D +K+ D RI F+EF E
Sbjct: 122 LRATGE--HVIE-EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 28.9 bits (63), Expect = 6.6, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD N DG I +E I T + E K D +N+G I +EF ++M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 354 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 281 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 340
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 341 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 383
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 384 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 236 FEGDTLVNRIELKGIGFKEDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLF 286
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 287 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEF--LTM 338
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 339 MARKMKDTDSEEEIREAFRVFDKDG-NGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 396
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 397 IDGDGQVNYEEFVQMM 412
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 354 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 281 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 340
Query: 280 LMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEM 339
R+ R F +DG + + M NL E++
Sbjct: 341 RKMKDTDSEEEIREAFR-----------------VFDKDGNGYISAAELRHVMTNLGEKL 383
Query: 340 LRLEFAHY----DYKQRGTISAEDFALSMVA 366
E D G ++ E+F M A
Sbjct: 384 TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 290 FHRDGLRTGLNVKGP--VENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHY 347
F D L + +KG E+G ++ + + R +L E+ +F + F+ +
Sbjct: 236 FEGDTLVNRIELKGIGFKEDGNILGHKLEYNSRDQLTEEQIAEF---------KEAFSLF 286
Query: 348 DYKQRGTISAEDFAL---SMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAE 404
D GTI+ ++ S+ + L ++N VD N I F EF
Sbjct: 287 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEF--LTM 338
Query: 405 LRRKLQPF--------CLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 456
+ RK++ +F NG ++ + R G LTD +D + + D
Sbjct: 339 MARKMKDTDSEEEIREAFRVFDKDG-NGYISAAEL-RHVMTNLGEKLTDEEVDEMIREAD 396
Query: 457 SNRDGNLSLEEFVRVL 472
+ DG ++ EEFV+++
Sbjct: 397 IDGDGQVNYEEFVQMM 412
>pdb|3JXE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
Tryptophanyl-Trna Synthetase In Complex With Trpamp
pdb|3JXE|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
Tryptophanyl-Trna Synthetase In Complex With Trpamp
Length = 392
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
Query: 426 LTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVLHNRERDIAQPVET 485
LT DD +R AY DN++DII FD ++ EF ++ ++A P+
Sbjct: 124 LTFDDTKRWAY--------DNILDIIAVGFDPDKTFIFQNSEFTKIY-----EMAIPIAK 170
Query: 486 GI-LGFLNCCWNFTNNSSIG 504
I + FT S IG
Sbjct: 171 KINFSMAKAVFGFTEQSKIG 190
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 32.3 bits (72), Expect = 0.59, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
E F LFD +N G IS E + L + S VA M +ID +G + EF + +ALM
Sbjct: 15 EAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI-EFSEFLALM 73
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVM 278
+ F AF +FD DN+G IS E VM
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVM 37
Score = 28.9 bits (63), Expect = 6.8, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 215 ELRCAPSE-----FFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDI-DNNGE 268
+L+C SE F +FD N DGLIS E +T + + V + ++ D +GE
Sbjct: 76 QLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGSGE 135
Query: 269 ISKEEFKQVMA 279
I+ ++F +++
Sbjct: 136 INIKQFAALLS 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
NG ++ + + R+ G L+D +D + + D++ DG ++ EEFVRVL
Sbjct: 97 NGFVSAAELRHVMTRL-GEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEIS 270
ELR SE D + +G + F E++ + + E AF++FD D NG +S
Sbjct: 46 AELRDMMSEI----DRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVS 101
Query: 271 KEEFKQVM 278
E + VM
Sbjct: 102 AAELRHVM 109
Score = 28.9 bits (63), Expect = 6.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G +S E +T L + + + D D +G+++ EEF +V+
Sbjct: 87 EAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 228 DMNNDGLISFKEYIFFV----TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
D + +G I + E++ TLLS AF+MFD DN+G+IS E + +
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLS--RERLERAFRMFDSDNSGKISSTELATIFGV 446
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD +N G IS E + + ++ D +N+GE+ +EF+Q++
Sbjct: 424 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 32.3 bits (72), Expect = 0.67, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
+ F AF MFD D G+IS +E VM ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML 49
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 226 LFDMNNDGLISFKEYIFFV---TLLSIPESSFSVAFKMFDIDNNGEISKEEF 274
L DM+ G I + E+I T+L + AFKMFD D +G+IS +E
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTIL-LSRERMERAFKMFDKDGSGKISTKEL 439
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 32.3 bits (72), Expect = 0.68, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.3 bits (72), Expect = 0.72, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 32.0 bits (71), Expect = 0.79, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 13 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 71
Score = 29.6 bits (65), Expect = 4.4, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVM 35
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 32.0 bits (71), Expect = 0.81, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 12 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 70
Score = 29.6 bits (65), Expect = 4.5, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVM 34
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 32.0 bits (71), Expect = 0.84, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 18 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 32.0 bits (71), Expect = 0.84, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
+ F AF MFD D G+IS +E VM ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML 49
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 32.0 bits (71), Expect = 0.84, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 10 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 68
Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVM 32
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 32.0 bits (71), Expect = 0.86, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 9 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
Score = 29.3 bits (64), Expect = 4.7, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVM 31
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 32.0 bits (71), Expect = 0.86, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + D+D +G+I+ EEF +VM
Sbjct: 8 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 66
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVM 30
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 32.0 bits (71), Expect = 0.89, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 13 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 72
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 32.0 bits (71), Expect = 0.89, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 6 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 64
Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVM 28
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 32.0 bits (71), Expect = 0.91, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
+ F AF MFD D G+IS +E VM ++
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRML 38
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 31.6 bits (70), Expect = 0.95, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 9 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AF++FD D NG IS E + VM
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVM 31
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 31.6 bits (70), Expect = 0.96, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 10 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 69
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 31.6 bits (70), Expect = 0.99, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +GLIS E +T L + + + DID +G I+ EEF ++M
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
NGL++ + + + G LTD+ +D + + D + DG+++ EEFVR++
Sbjct: 22 NGLISAAELRHVMTNL-GEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AFK+FD D NG IS E + VM
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVM 34
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 208 RGERRPGELRCAPSEFFMLFDM---NNDGLISFKEYIFF-VTLLSIPESSFSVAFKMFDI 263
+G R G + P F +L D + G I + E++ + + + AF++FD+
Sbjct: 79 KGLERSGLM--LPPNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKLIYCAFRVFDV 136
Query: 264 DNNGEISKEEFKQVM 278
DN+GEI+ E V+
Sbjct: 137 DNDGEITTAELAHVL 151
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I +E + T +I E K D +N+G I +EF + M
Sbjct: 8 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
>pdb|1WL2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R90a Mutant
Length = 299
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|1WL3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R91a Mutant
pdb|1WL3|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R91a Mutant
Length = 299
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 257 AFKMFDIDNNGEISKEEFKQVMALM 281
AF+++D+D +G+IS+ E QV+ LM
Sbjct: 119 AFQLYDLDRDGKISRHEMLQVLRLM 143
>pdb|1V4E|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
pdb|1V4E|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
Length = 299
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|2AZL|A Chain A, Crystal Structure For The Mutant F117e Of Thermotoga
Maritima Octaprenyl Pyrophosphate Synthase
Length = 299
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 228 DMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGEISKEEFKQ 276
D++N G I +KE+I L+ E AF FD D +G I+ +E +Q
Sbjct: 73 DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQ 123
>pdb|1V4I|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F132a Mutant
Length = 299
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 254 FSVAFKMFDIDNNGEISKEEFKQVM 278
F AF +FD DNNG IS E VM
Sbjct: 13 FKEAFALFDKDNNGSISSSELATVM 37
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKM--FDIDNNGEISKEEFKQVMA 279
E F LFD +N+G IS E + L + S V M D+D N +I EF + +A
Sbjct: 15 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI---EFSEFLA 71
Query: 280 LM 281
LM
Sbjct: 72 LM 73
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDI-DNNGEISKEEFKQVMA 279
E F +FD N DGLIS E +T + + V + ++ D +GEI+ ++F +++
Sbjct: 88 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAALLS 146
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E +T L + + + DID +G+++ EEF Q+M
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 228 DMNNDGLISFKEYIFFVTLL------SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
D + +G I F E F+T++ + E AF++FD D NG IS E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 280 -LMRSHNRQG-------AFHRDG--------LRTGLNVKGPVENGGLVEYFFGE---DGR 320
M+ + + F +DG LR + G V+ E DG
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134
Query: 321 ARLQHEKFVQFM 332
++ +E+FVQ M
Sbjct: 135 GQVNYEEFVQMM 146
>pdb|1VG6|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
F132aL128AI123A MUTANT
Length = 299
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 256 VAFKMFDIDNNGEISKEEFKQV 277
+ FK FDID NG+IS EE K++
Sbjct: 133 IPFKFFDIDGNGKISVEELKRI 154
>pdb|1VG4|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F132aL128A
MUTANT
pdb|1VG4|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F132aL128A
MUTANT
Length = 299
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AFK+FD D NG IS E + VM
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVM 30
Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E + L + + K D+D +G+++ EEF ++M
Sbjct: 8 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMM 67
Query: 280 LMR 282
+R
Sbjct: 68 TVR 70
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 212 RPGELRCAPSEFFMLFDMNNDGLISFKEYIFF--VTLLSIPESSFSVAFKMFDIDNNGEI 269
P +R F +FD + G I+ E+ + ++ +S E F+ D+DN+GE+
Sbjct: 107 EPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGEL 166
Query: 270 SKEEF 274
+E
Sbjct: 167 DVDEM 171
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F FD +N G IS E + + ++ D +N+GE+ +EF+Q +
Sbjct: 424 FRXFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 228 DMNNDGLISFKEYIFFV----TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
D + +G I + E++ TLLS AF+ FD DN+G+IS E + +
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLS--RERLERAFRXFDSDNSGKISSTELATIFGV 446
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I E + T +I E K D +N+G I +EF + M
Sbjct: 9 SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 68
>pdb|1V4J|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima V73y Mutant
pdb|1V4J|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima V73y Mutant
Length = 299
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELYHLASLLH 80
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 233 GLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNR 286
G +K + V L ++ F++ D D +G I +EE K V+ +H R
Sbjct: 22 GTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 251 ESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E AFK+FD D NG IS E + VM
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVM 35
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F +FD + +G IS E + L + + K D+D +G+++ EEF ++M
Sbjct: 13 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMM 72
Query: 280 LMRSHNRQGAFHR 292
+R + R
Sbjct: 73 TVRGGGGGNGWSR 85
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVM 278
+ F AF +FD DNNG IS E VM
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVM 36
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKM--FDIDNNGEISKEEFKQVMA 279
E F LFD +N+G IS E + L + S V M D+D N +I EF + +A
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI---EFSEFLA 70
Query: 280 LM 281
LM
Sbjct: 71 LM 72
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 220 PSEFFMLFDM---NNDGLISFKEYIFF-VTLLSIPESSFSVAFKMFDIDNNGEISKEEFK 275
P F +L D + G I + E+I + + + AF++FD+DN+GEI+ E
Sbjct: 86 PYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELA 145
Query: 276 QVM 278
++
Sbjct: 146 HIL 148
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVM 278
+ F AF +FD DNNG IS E VM
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVM 36
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKM--FDIDNNGEISKEEFKQVMA 279
E F LFD +N+G IS E + L + S V M D+D N +I EF + +A
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI---EFSEFLA 70
Query: 280 LM 281
LM
Sbjct: 71 LM 72
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVM 278
+ F AF +FD DNNG IS E VM
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVM 36
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKM--FDIDNNGEISKEEFKQVMA 279
E F LFD +N+G IS E + L + S V M D+D N +I EF + +A
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI---EFSEFLA 70
Query: 280 LM 281
LM
Sbjct: 71 LM 72
>pdb|1VG2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima A76y Mutant
Length = 299
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLYSLLH 80
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSV-------AFKMFDIDNNGEISKEEF 274
E +MN G + F +++ + + E++ + AF+ FD + +GEIS E
Sbjct: 65 ELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 124
Query: 275 KQVMALMRSHNRQGAFHRD 293
++ M + H HRD
Sbjct: 125 REAMRKLLGHQ---VGHRD 140
>pdb|1WKZ|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima K41a Mutant
pdb|1WKZ|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima K41a Mutant
Length = 299
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGAMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSV-------AFKMFDIDNNGEISKEEF 274
E +MN G + F +++ + + E++ + AF+ FD + +GEIS E
Sbjct: 51 ELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
Query: 275 KQVMALMRSHNRQGAFHRD 293
++ M + H HRD
Sbjct: 111 REAMRALLGHQ---VGHRD 126
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 423 NGLLTRDDFQRAAYRVCG--ILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
+GL+ +++FQ A ++ L D V D+ FD+ +G L EEF R L
Sbjct: 33 DGLINKEEFQLALFKTNKKESLFADRVFDL----FDTKHNGILGFEEFARAL 80
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 187 MRAIVPVFPPSESHLVRDGYLRGE-------RRPGELRCAPSEFFMLFDMNNDGLISFKE 239
+ A+ +F S ++ DG + E + + F LFD ++G++ F+E
Sbjct: 16 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEE 75
Query: 240 YIFFVTLL--SIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLR 296
+ +++ + P + +F+++D+ G I ++E KQ++ +
Sbjct: 76 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA------------E 123
Query: 297 TGLNVKGPV 305
+G+N+K V
Sbjct: 124 SGMNLKDTV 132
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 228 DMNNDGLISFKEYIFFV----TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
D + +G I + E++ +LLS + AF+ FD D NG+IS +E V L
Sbjct: 400 DFDRNGYIDYSEFVTVAMDRKSLLS--KDKLESAFQKFDQDGNGKISVDELASVFGL 454
>pdb|1QHH|A Chain A, Structure Of Dna Helicase With Adpnp
Length = 167
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 332 MRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCD 391
M L E++L AH + +Q+ + + L ++A A G L +R+ L E+H+
Sbjct: 1 MNFLSEQLL----AHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAP 56
Query: 392 LRITFEEFKNFA--ELRRKLQ 410
I F N A E+R ++Q
Sbjct: 57 WNILAITFTNKAAREMRERVQ 77
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ +E + L + E D D NG I +EF +MA
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
F FD + DG I+ E + L +P+ + D+D +G ++ EEF +++A
Sbjct: 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 206 YLRGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDN 265
Y +G GE F D N G + +E+ T L + + F+ D D
Sbjct: 15 YFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADR 74
Query: 266 NGEISKEEFKQ 276
+G I+ +EF +
Sbjct: 75 DGAITFQEFAR 85
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 216 LRCAPSEFFML-----FDMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNG 267
L C P+E + D + +G I+F E++ + E AF++FD D NG
Sbjct: 39 LGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNG 98
Query: 268 EISKEEFKQV 277
IS E + V
Sbjct: 99 YISAAELRHV 108
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQ 276
E F +FD + +G IS E T L + + + DID +G+++ EEF Q
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSI-----PESSFSVAFKMFDIDNNGE 268
G+ F FD G + F++ FVT LSI F ++DI+ +G
Sbjct: 49 GDASTYAHYLFNAFDTTQTGSVKFED---FVTALSILLRGTVHEKLRWTFNLYDINKDGY 105
Query: 269 ISKEEFKQVMALMRSHNRQGAF 290
I+KEE ++ + ++ GA+
Sbjct: 106 INKEEMMDIVKAI--YDMMGAY 125
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 448 IDIIFQVFDSNRDGNLSLEEFVR 470
+D+ FQ D N+DG ++L+EF+
Sbjct: 139 VDVFFQKMDKNKDGIVTLDEFLE 161
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ +E + L + E D D NG I +EF +MA
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSV-------AFKMFDIDNNGEISKEEF 274
E +MN G + F +++ + + E++ + AF+ FD + +GEIS E
Sbjct: 51 ELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
Query: 275 KQVMALMRSHNRQGAFHRD 293
++ M + H HRD
Sbjct: 111 REAMRKLLGHQ---VGHRD 126
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 423 NGLLTRDDFQRAAYRVCG--ILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
+GL+ +++FQ A ++ L D V D+ FD+ +G L EEF R L
Sbjct: 64 DGLINKEEFQLALFKTNKKESLFADRVFDL----FDTKHNGILGFEEFARAL 111
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 187 MRAIVPVFPPSESHLVRDGYLRGE-------RRPGELRCAPSEFFMLFDMNNDGLISFKE 239
+ A+ +F S ++ DG + E + + F LFD ++G++ F+E
Sbjct: 47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEE 106
Query: 240 YIFFVTLL--SIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
+ +++ + P + +F+++D+ G I ++E KQ++
Sbjct: 107 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149
>pdb|3PJR|A Chain A, Helicase Substrate Complex
pdb|1QHG|A Chain A, Structure Of Dna Helicase Mutant With Adpnp
pdb|1PJR|A Chain A, Structure Of Dna Helicase
Length = 724
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 344 FAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFA 403
AH + +Q+ + + L ++A A G L +R+ L E+H+ I F N A
Sbjct: 9 LAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKA 68
Query: 404 --ELRRKLQ 410
E+R ++Q
Sbjct: 69 AREMRERVQ 77
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 228 DMNNDGLISFKEYIFFV----TLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMAL 280
D + +G I + E++ +LLS + AF+ FD D NG+IS +E V L
Sbjct: 117 DFDRNGYIDYSEFVTVAMDRKSLLS--KDKLESAFQKFDQDGNGKISVDELASVFGL 171
>pdb|1V4K|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima S77f Mutant
Length = 299
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLAFLLH 80
>pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F52a Mutant
Length = 299
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSAKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 224 FMLFDMNNDGLISFKEY-IFFVTL-----LS---IPESSFSVAFKMFDIDNNGEISKEEF 274
F D N DG ++ E F VTL LS + E+S + KM D +++G+ISKEEF
Sbjct: 13 FKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKL-IKMADKNSDGKISKEEF 71
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSI-----PESSFSVAFKMFDIDNNGE 268
G+ F FD G + F++ FVT LSI F ++DI+ +G
Sbjct: 52 GDASTYAHYLFNAFDTTQTGSVKFED---FVTALSILLRGTVHEKLRWTFNLYDINKDGY 108
Query: 269 ISKEEFKQVM 278
I+KEE ++
Sbjct: 109 INKEEMMDIV 118
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 448 IDIIFQVFDSNRDGNLSLEEFVR 470
+D+ FQ D N+DG ++L+EF+
Sbjct: 142 VDVFFQKMDKNKDGIVTLDEFLE 164
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 252 SSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
+ F AF MFD D G+IS + VM ++
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRML 49
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F ++D N DG I E + T +I E K D +N+G I +EF + M
Sbjct: 98 SDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I E + T +I E K D +N+G I +E+ + M
Sbjct: 98 SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSI-----PESSFSVAFKMFDIDNNGE 268
G+ F FD G + F++ FVT LSI F ++DI+ +G
Sbjct: 49 GDASTYAHYLFNAFDTTQTGSVKFED---FVTALSILLRGTVHEKLRWTFNLYDINKDGY 105
Query: 269 ISKEEFKQVM 278
I+KEE ++
Sbjct: 106 INKEEMMDIV 115
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 448 IDIIFQVFDSNRDGNLSLEEFVR 470
+D+ FQ D N+DG ++L+EF+
Sbjct: 139 VDVFFQKMDKNKDGIVTLDEFLE 161
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 4.3, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 227 FDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEF 274
D + DG +S E+ F+ + + + F D + NG+IS++EF
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVA-----FKMFDIDNNGEISKEEFKQ 276
E+F D + G IS E ++ +P FS+A M+D +++GEI+ +EFK
Sbjct: 31 EWFRAVDTDGSGAISVPELNAALSSAGVP---FSLATTEKLLHMYDKNHSGEITFDEFKD 87
Query: 277 VMALMRSHNRQGAFHRDGLRTG 298
+ + S R+G RD G
Sbjct: 88 LHHFILSM-REGFRKRDSSGDG 108
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 451 IFQVFDSNRDGNLSLEEFVRV 471
+F+ FD N+DG LSL+EF V
Sbjct: 6 VFEKFDKNKDGKLSLDEFREV 26
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLLS--IPESSFSVAFKMFDIDNNGEISKEEFKQVMALM 281
F FD N DG +S E+ S + F+ D+D NGE++ +EF + M
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 29.6 bits (65), Expect = 4.5, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 423 NGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNRDGNLSLEEFVRVL 472
NG +++ + A R G + + +++I Q D + DG + EEFV +L
Sbjct: 50 NGFISKQELG-TAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 247 LSIPESSFSV---AFKMFDIDNNGEISKEEFKQVM 278
+ IPE AFK+FD D NG ISK+E M
Sbjct: 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAM 62
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 29.6 bits (65), Expect = 4.5, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F L+D + DG I+ KE + L + E+ D D NG I EF +MA
Sbjct: 14 EAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 29.6 bits (65), Expect = 4.6, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 29.6 bits (65), Expect = 4.6, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 214 GELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSI-----PESSFSVAFKMFDIDNNGE 268
G+ F FD G + F++ FVT LSI F ++DI+ +G
Sbjct: 85 GDASTYAHYLFNAFDTTQTGSVKFED---FVTALSILLRGTVHEKLRWTFNLYDINKDGY 141
Query: 269 ISKEEFKQVM 278
I+KEE ++
Sbjct: 142 INKEEMMDIV 151
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 448 IDIIFQVFDSNRDGNLSLEEFVR 470
+D+ FQ D N+DG ++L+EF+
Sbjct: 175 VDVFFQKMDKNKDGIVTLDEFLE 197
>pdb|1VG3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima A76yS77F
MUTANT
Length = 299
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRGVEIGED-AISSLAALELVHLYFLLH 80
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 227 FDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEF 274
D + DG +S E+ F+ + + + F D + NG+IS++EF
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQ 276
E F +FD + +G IS E T L + + + DID +G+++ EEF Q
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
Score = 29.3 bits (64), Expect = 6.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQV 277
D + +G I F E++ + E AF++FD D NG IS E + V
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 109
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F +FD + +G IS + +T L + + + DID +G+++ E+F Q+M
Sbjct: 11 EAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMM 69
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 29.3 bits (64), Expect = 5.8, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 230 NNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
NN+G ++F E+ + + E AFK+FD D +G IS E + VM
Sbjct: 58 NNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVM 109
Score = 28.9 bits (63), Expect = 6.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEF 274
E F +FD + DG IS E F + L + + + D D +G I+ EEF
Sbjct: 87 EAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEF 141
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQ 276
E F +FD + +G IS E T L + + + DID +G+++ EEF Q
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLL---SIPESSFSVAFKMFDIDNNGEISKEEFKQV 277
D + +G I F E++ + E AF++FD D NG IS E + V
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 22/95 (23%)
Query: 257 AFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVK----GPVENGGLVE 312
AF+++D+D + +IS++E QV+ +M G+N+ G + + + E
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMM---------------VGVNISDEQLGSIADRTIQE 162
Query: 313 YFFGEDGRARLQHEKFVQFMRNL-YEEMLRLEFAH 346
+DG + + +FV+ + + E+ + + F H
Sbjct: 163 A--DQDGDSAISFTEFVKVLEKVDVEQKMSIRFLH 195
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 28.9 bits (63), Expect = 6.5, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 222 EFFMLFDMNNDGLISFKEYIFFVTLLSI--PESSFSVAFKMFDIDNNGEISKEEFKQVM 278
E F LFD +ND ++ +E + L + S K +D DN+G+ +E F +M
Sbjct: 18 EAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIM 76
>pdb|2PJR|A Chain A, Helicase Product Complex
pdb|2PJR|F Chain F, Helicase Product Complex
Length = 548
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 344 FAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFA 403
AH + +Q+ + + L ++A A G L +R+ L E+H+ I F N A
Sbjct: 9 LAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKA 68
Query: 404 --ELRRKLQPFC 413
E+R ++Q
Sbjct: 69 AREMRERVQSLL 80
>pdb|1WL0|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R44a Mutant
pdb|1WL0|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R44a Mutant
Length = 299
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +ML + + +K RG ED A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLAVRLSILSFKNRGVEIGED-AISSLAALELVHLASLLH 80
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 445 DNVIDIIFQVFDSNRDGNLSLEEFVRVLHNRE 476
D D ++FD N+DG L L + R+L +E
Sbjct: 147 DEYTDAXXKIFDKNKDGRLDLNDLARILALQE 178
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 28.9 bits (63), Expect = 7.5, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 222 EFFMLFDMNNDGLISFKEY-IFFVTLLSIP-ESSFSVAFKMFDIDNNGEISKEEFKQVMA 279
E F LFD + DG I+ KE +L P E+ D D NG I EF +MA
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEF 274
F LFD ++ G IS K L ++ + + FD+D +GEI++ EF
Sbjct: 102 FQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEYIFFVTLL--SIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F LFD + G ISFK L ++ + D D +GE+S++EF ++M
Sbjct: 85 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 28.5 bits (62), Expect = 8.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 224 FMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
F +FD N DG I +E I T + E K D +N+G I +EF ++M
Sbjct: 16 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
>pdb|1VG7|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
F132aL128AI123AD62A MUTANT
Length = 299
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 330 QFMRNL--YEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLN 378
Q M++L Y +MLR+ + +K RG + + A+S +A+ ++ HL LL+
Sbjct: 31 QIMKDLPLYGKMLRVRLSILSFKNRG-VEIGEAAISSLAALELVHLASLLH 80
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 9.2, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F + D N DG I E + T +I E K D +N+G I +EF + M
Sbjct: 98 SDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 9.2, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 221 SEFFMLFDMNNDGLISFKEY--IFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVM 278
S+ F +FD N DG I E + T +I E K D +N+G I +E + M
Sbjct: 98 SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 28.5 bits (62), Expect = 9.5, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 228 DMNNDGLISFKEYIFFVTLLSIPESS---FSVAFKMFDIDNNGEISKEEFKQV 277
D + G I F+E++ +T S AF++FD DN+G I+ ++ ++V
Sbjct: 74 DKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRV 126
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 22/95 (23%)
Query: 257 AFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVK----GPVENGGLVE 312
AF+++D+D + +IS++E QV+ +M G+N+ G + + + E
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMM---------------VGVNISDEQLGSIADRTIQE 162
Query: 313 YFFGEDGRARLQHEKFVQFMRNL-YEEMLRLEFAH 346
+DG + + +FV+ + + E+ + + F H
Sbjct: 163 A--DQDGDSAISFTEFVKVLEKVDVEQKMSIRFLH 195
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,247,495
Number of Sequences: 62578
Number of extensions: 516203
Number of successful extensions: 2699
Number of sequences better than 100.0: 210
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 1816
Number of HSP's gapped (non-prelim): 848
length of query: 508
length of database: 14,973,337
effective HSP length: 103
effective length of query: 405
effective length of database: 8,527,803
effective search space: 3453760215
effective search space used: 3453760215
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 54 (25.4 bits)