BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010533
(508 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NXE6|ARMC6_HUMAN Armadillo repeat-containing protein 6 OS=Homo sapiens GN=ARMC6 PE=1
SV=2
Length = 501
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 197/433 (45%), Gaps = 34/433 (7%)
Query: 62 RTISQEAFDEVVKENMEDLGMEPTEALQDAIQTLSLQGVDLSGIVKCVPGESS-LKDNPL 120
+ I+QE FD V+EN+E+ M P EA+++A++ QGVDLS IVK P S+ P
Sbjct: 29 KRIAQETFDAAVRENIEEFAMGPEEAVKEAVEQFESQGVDLSNIVKTAPKVSADGSQEPT 88
Query: 121 IQSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCS 180
L+ L L ++ + E+ + + C ++ +A + G ++ +
Sbjct: 89 HDILQMLSDL----QESVASSRPQEVSAYLTRFCDQCKQDKAC--RFLAAQKGAYPIIFT 142
Query: 181 ICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGF 240
G + +L L +++L G +LLV L ++ ++ SG
Sbjct: 143 AWKLATAGDQGLLLQSLNALSVLT---DGQPDLLDAQGLQLLVATLTQNADEADLTCSGI 199
Query: 241 AVVAASATGNEVVKESYMELKIDELILEILSRQ--RNDSIQSLYDAIRVLLTPDDDQVVA 298
V + +E ++ ++ + L+ ++ D ++ A+RV+ DD +V
Sbjct: 200 RCVRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVP- 258
Query: 299 SQVYGYARRFAKIGIA-----RALVHSLHAGLSSPSLISASIA-LKAVAVNDEICKSVAE 352
+G+A AK+ + + L+ + A L +P ++S L +A+ +E C+ V +
Sbjct: 259 ---FGHAHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 315
Query: 353 NGGIDALLRCI---------DDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDK 403
GG+ L+ + D SG+Q + + S L +AG+D K AI+ GG +
Sbjct: 316 LGGLSILVSLLADCNDHQMRDQSGVQ---ELVKQVLSTLRAIAGNDDVKDAIVRAGGTES 372
Query: 404 LIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQR 463
++ + V ++ + + L+LR P+N+ +E G A+QAM P +Q+
Sbjct: 373 IVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQK 432
Query: 464 SSCFMIRNLVARN 476
+C +IRNLVA
Sbjct: 433 QACMLIRNLVAHG 445
>sp|Q5RD03|ARMC6_PONAB Armadillo repeat-containing protein 6 OS=Pongo abelii GN=ARMC6 PE=2
SV=1
Length = 501
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 209/436 (47%), Gaps = 40/436 (9%)
Query: 62 RTISQEAFDEVVKENMEDLGMEPTEALQDAIQTLSLQGVDLSGIVKCVPGESS----LKD 117
+ I+QE FD V+EN+E+ M P EA+++A++ QGVDLS IVK P S+
Sbjct: 29 KRIAQETFDAAVRENIEEFAMGPDEAVKEAVEQFESQGVDLSNIVKTAPKVSADGSQEPT 88
Query: 118 NPLIQSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVEL 177
+ ++Q+L L++ +S+ + E+ + + C ++ +A + G +
Sbjct: 89 HDILQTLSDLQESVASSRPQ-------EVSAYLTRFCDQCKQDKAC--RFLAAQKGAYPI 139
Query: 178 VCSICYKMRCGSKRVLDSCLKTMALLVH---DVQSTETFRTGGGPKLLVNILIDGNEDPE 234
+ + G + +L L +++L D+ T+ G +LLV L ++ +
Sbjct: 140 IFTAWKLATAGDQGLLLQSLNALSVLTDGQPDLLDTQ------GLQLLVATLTRNADEAD 193
Query: 235 ILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRN--DSIQSLYDAIRVLLTPD 292
+ SG V + +E ++ ++ + L+ ++ + D ++ A+RV+ D
Sbjct: 194 LTCSGIRCVRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHADVVREACCALRVMTFDD 253
Query: 293 DDQVVASQVYGYARRFAKIGIA-----RALVHSLHAGLSSPSLISASIA-LKAVAVNDEI 346
D +V +G+A AK+ + + L+ + A L +P ++S L +A+ +E
Sbjct: 254 DIRVP----FGHAHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEF 309
Query: 347 CKSVAENGGIDALLRCIDDS-----GLQGN-KTVARICCSLLSKLAGSDSNKSAIIENGG 400
C+ V + GG+ L+ + D G Q + + + + S+L +AG+D K AI+ GG
Sbjct: 310 CQEVVDLGGLSILVSLLADCNDHQMGDQSSVQELVKQVLSILRAIAGNDDVKDAIVRAGG 369
Query: 401 MDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQ 460
+ ++ + V ++ + + L+LR P+N+ +E G A+QAM P
Sbjct: 370 TESIVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAG 429
Query: 461 LQRSSCFMIRNLVARN 476
+Q+ +C +IRNLVA +
Sbjct: 430 VQKQACMLIRNLVAHS 445
>sp|Q8BNU0|ARMC6_MOUSE Armadillo repeat-containing protein 6 OS=Mus musculus GN=Armc6 PE=2
SV=1
Length = 468
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 200/425 (47%), Gaps = 26/425 (6%)
Query: 62 RTISQEAFDEVVKENMEDLGMEPTEALQDAIQTLSLQGVDLSGIVKCVPGES--SLKDNP 119
+ I+QE FD V+EN+E+ M EA+++A++ QGVDLS IVK +P S L++ P
Sbjct: 4 KRITQETFDAAVRENIEEFEMGTEEAIREAVEQFESQGVDLSNIVKTIPKVSLDGLQE-P 62
Query: 120 LIQSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVC 179
L+ L L ++ + L E+ + + C + S +A + G ++
Sbjct: 63 THSVLQALNDL----QESLTGSRLQEVSAHLVRFCDQCKQQKAS--RYLAAQKGAYPILL 116
Query: 180 SICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSG 239
+ +++ S + L ++ D Q G LLV L + E+ G
Sbjct: 117 AA-WQLAATSNQGLLLQALNALAVLTDGQPD--LLDAQGLHLLVATLAQNAANTELTCCG 173
Query: 240 FAVVAASATGNEVVKESYMELKIDELILEILSR--QRNDSIQSLYDAIRVLLTPDDDQVV 297
V +E ++ ++ + L+ +++ Q D ++ A+RV+ DD +V
Sbjct: 174 IRCVRHVCLKHEQNRQDLVKAGVLPLLTAAITQHGQHADVVREACWALRVMTFDDDIRVP 233
Query: 298 ASQVYGYARRFAKIGIA-----RALVHSLHAGLSSPSLISASIA-LKAVAVNDEICKSVA 351
+G+A AK+ + + L+ + A +P ++S + L +AV +E C+ V
Sbjct: 234 ----FGHAHEHAKMIVQENKGLKVLIEAARAFSDNPGVLSELCSTLSRLAVRNEFCQEVI 289
Query: 352 ENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARF 411
+ GG+ L+ + D ++ + + S L +AG+D K AI+ GG + ++ R
Sbjct: 290 DLGGLGILVTLLADCN--DHQDLVKQVLSALRAIAGNDDVKDAIVRAGGTESIVAAMTRH 347
Query: 412 SDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRN 471
V ++ + + VL+LR P+N+ +E G A+QAM P +Q+ +C +IRN
Sbjct: 348 LASPQVCEQSCAALCVLALRKPDNSRVIIEGGGALAALQAMKAHPQEAGVQKQACMLIRN 407
Query: 472 LVARN 476
LV+R+
Sbjct: 408 LVSRS 412
>sp|Q7K486|ARMC6_DROME Armadillo repeat-containing protein 6 homolog OS=Drosophila
melanogaster GN=CG5721 PE=1 SV=1
Length = 464
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 205/435 (47%), Gaps = 20/435 (4%)
Query: 62 RTISQEAFDEVVKENMEDLGMEPTEALQDAIQTLSLQGVDLSGIVKCVPGESSLKDNPLI 121
+ ISQ+ FD+VVKEN+ + M P+EA ++ I+ QG++L+ I+K + +
Sbjct: 3 KVISQDTFDDVVKENVVEFSMTPSEAKEETIKQFEAQGINLANIIKDLSVNPQTGQPVIN 62
Query: 122 QSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSV-NAAVATKNGGVELVCS 180
++++++K+ + L E L ++L L + S+ + +A KNG + + +
Sbjct: 63 ETVDKIKE--------HIGQKLEETTELLEQLATLDAECKKSLAHRVLAGKNGAHDALIT 114
Query: 181 ICYKMRCG---SKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILN 237
+ + ++ VL L+ + L H + + F +++ +L E E+
Sbjct: 115 LLEETLSAESPNESVLKKSLEAINSLTH--KQPDLF-DAEAMAVVLKLLALKVESEEVTL 171
Query: 238 SGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVV 297
+ + +E+ +++ M +L+ +L + ++ ++ L R L+ DD +V
Sbjct: 172 LTLQWLQKACIMHEMNRQNIMNTSALKLMKPLLGKGKDRLVRELTAVFRFLVLDDDIRVE 231
Query: 298 ASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGID 357
+ +AR+ A + LV L A L + + +AV E+C ++ E GG+
Sbjct: 232 FGCAHEHARQIAG-EVLITLVELLPAYQDPNVLADLLLTIGTLAVRQELCTAIDEAGGLK 290
Query: 358 ALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASV 417
++ I S L + + R LL LAG DS KS I++ G + + + ++
Sbjct: 291 SVFE-IMSSNLDEVR-LNREALKLLRALAGQDSVKSHIVQQGVAPIIKQLLETHQSNENI 348
Query: 418 LQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNP 477
+ ++ +T L+LR E++A + G ++ ++A+ P + +QR+ + IRN+V+R+
Sbjct: 349 VAAALACVTTLTLRVQEHSAAFFDTGIAEVIVEALRAHPKHKIVQRNGAWAIRNMVSRSR 408
Query: 478 ENSFCSVMVSRNLSD 492
C +S + D
Sbjct: 409 NQ--CETWISFGVED 421
>sp|Q0DV28|ARK1_ORYSJ Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa
subsp. japonica GN=Os03g0152900 PE=2 SV=2
Length = 945
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 17/125 (13%)
Query: 295 QVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVA------VNDEICK 348
++++SQ ++ F ++G+ L A L S L A+K VA VN E
Sbjct: 677 ELLSSQRSNISKIFEEVGLPNVL-----ALLKSDELEVQIHAVKVVANLAAEDVNQE--- 728
Query: 349 SVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVS 408
+ E GG+DALL ++ S N T+ R+ ++ LA + SN+ I+ GG L ++
Sbjct: 729 KIVEEGGLDALLSLLETSE---NTTIHRVTAGAIANLAMNGSNQGLIMNKGGARLLANIA 785
Query: 409 ARFSD 413
++ +D
Sbjct: 786 SKTND 790
>sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=aars-2 PE=2 SV=1
Length = 968
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 258 MELKIDELILEI----LSRQRNDSIQSLYDAIRVLL---TPDDDQVVASQVYGYARRFAK 310
++ KI E++ E L R DSI+ AI+ L T VA +V G A+ A
Sbjct: 798 LQKKIQEIVDEANGAQLPYWRKDSIREKAKAIQKTLDGYTKAQQAAVAEKVLGEAKELAA 857
Query: 311 IG-IARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDS--- 366
+ LVH A +S ++ +A LK + SV E+ G L +D S
Sbjct: 858 VAEQPTVLVHVFAANANSKAIDNALKLLKDTKA--VMAFSVNEDSGKVLCLAKVDKSLVS 915
Query: 367 -GLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKL 404
GL+ N+ V +C L K G D+N EN +DKL
Sbjct: 916 NGLKANEWVNEVCTVLGGKGGGKDANAQLTGEN--VDKL 952
>sp|O22161|ADLO1_ARATH Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1
Length = 930
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 265 LILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVH---SL 321
L+L ++ + D + + + DD+ AS G A K G R L+ S
Sbjct: 393 LLLNLMQSSQEDVQERSATGLATFVVVDDEN--ASIDCGRAEAVMKDGGIRLLLELAKSW 450
Query: 322 HAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQG--NKTVARICC 379
GL S A+ A+ ++VN I KSVAE GGI L +GL N+ VA
Sbjct: 451 REGLQS----EAAKAIANLSVNANIAKSVAEEGGIKIL------AGLAKSMNRLVAEEAA 500
Query: 380 SLLSKLAGSDSNKSAIIENGGMDKLIVVSARF 411
L L+ + +K+AI + GG+ L+ + R+
Sbjct: 501 GGLWNLSVGEEHKNAIAQAGGVKALVDLIFRW 532
>sp|Q9M224|ADLO2_ARATH Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At3g60350 PE=2 SV=1
Length = 928
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 265 LILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVH---SL 321
L+L ++ + D + + + DD+ AS G A + G R L+ S
Sbjct: 384 LLLSLMQSAQEDVQERAATGLATFIVVDDEN--ASIDCGRAEAVMRDGGIRLLLELAKSW 441
Query: 322 HAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSL 381
GL S A+ A+ ++VN ++ K+VAE GGI L D N+ VA
Sbjct: 442 REGLQSE----AAKAIANLSVNAKVAKAVAEEGGISVLA----DLAKSMNRLVAEEAAGG 493
Query: 382 LSKLAGSDSNKSAIIENGGMDKLIVVSARF 411
L L+ + +K+AI + GG++ L+ + R+
Sbjct: 494 LWNLSVGEEHKNAIAQAGGVNALVDLIFRW 523
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 317 LVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVAR 376
L S H G+ A+ AL +A +D+ +S+A GG++AL+ S R
Sbjct: 609 LTQSPHEGVKQE----AAGALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQER 664
Query: 377 ICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENA 436
+ +L L+ S++N AI GG+ LI + ++D V + + LS +P NA
Sbjct: 665 VAGALWG-LSVSEANSIAIGHEGGIPPLIALVRSEAED--VHETAAGALWNLSF-NPGNA 720
Query: 437 ARAMEAG 443
R +E G
Sbjct: 721 LRIVEEG 727
>sp|Q02257|PLAK_MOUSE Junction plakoglobin OS=Mus musculus GN=Jup PE=1 SV=3
Length = 745
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDS-NKSAIIENGGMDKLIVVSARFSD 413
G++++L+ + + + V LS L ++S NK+ + +N G++ LI R D
Sbjct: 388 GLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGD 447
Query: 414 DASVLQEVMSIITVLSLRSPEN--AARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRN 471
+ + + + L+ R PE A ++ G AI +L PN L +++ +IRN
Sbjct: 448 KDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRN 507
Query: 472 L 472
L
Sbjct: 508 L 508
>sp|Q8SPJ1|PLAK_BOVIN Junction plakoglobin OS=Bos taurus GN=JUP PE=2 SV=1
Length = 745
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDS-NKSAIIENGGMDKLIVVSARFSD 413
G++++L+ + + + V LS L ++S NK+ + +N G++ LI R D
Sbjct: 388 GLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGD 447
Query: 414 DASVLQEVMSIITVLSLRSPEN--AARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRN 471
+ + + + L+ R PE A ++ G AI +L PN L +++ +IRN
Sbjct: 448 KDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRN 507
Query: 472 L 472
L
Sbjct: 508 L 508
>sp|P14923|PLAK_HUMAN Junction plakoglobin OS=Homo sapiens GN=JUP PE=1 SV=3
Length = 745
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDS-NKSAIIENGGMDKLIVVSARFSD 413
G++++L+ + + + V LS L ++S NK+ + +N G++ LI R D
Sbjct: 388 GLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGD 447
Query: 414 DASVLQEVMSIITVLSLRSPEN--AARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRN 471
+ + + + L+ R PE A ++ G AI +L PN L +++ +IRN
Sbjct: 448 KDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRN 507
Query: 472 L 472
L
Sbjct: 508 L 508
>sp|Q8WNW3|PLAK_PIG Junction plakoglobin OS=Sus scrofa GN=Jup PE=2 SV=1
Length = 745
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDS-NKSAIIENGGMDKLIVVSARFSD 413
G++++L+ + + + V LS L ++S NK+ + +N G++ LI R D
Sbjct: 388 GLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGD 447
Query: 414 DASVLQEVMSIITVLSLRSPEN--AARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRN 471
+ + + + L+ R PE A ++ G AI +L PN L +++ +IRN
Sbjct: 448 KDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRN 507
Query: 472 L 472
L
Sbjct: 508 L 508
>sp|Q6P0K8|PLAK_RAT Junction plakoglobin OS=Rattus norvegicus GN=Jup PE=1 SV=1
Length = 745
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 382 LSKLAGSDS-NKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPEN--AAR 438
LS L ++S NK+ + +N G++ LI R D + + + + L+ R PE A
Sbjct: 415 LSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQN 474
Query: 439 AMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNL 472
++ G AI +L PN L +++ +IRNL
Sbjct: 475 SVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNL 508
>sp|Q54I71|AARA_DICDI Protein aardvark OS=Dictyostelium discoideum GN=aarA PE=2 SV=1
Length = 757
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 7/161 (4%)
Query: 319 HSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARIC 378
H H G+ + AL+ + ND A+ GGI +LR + + +
Sbjct: 561 HPNHIGIQT----QGCGALRNLGCNDSNKVLSAKEGGIGLILRAM--RSFSSHPDLQLNG 614
Query: 379 CSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAAR 438
C L LA ++ NK+ I G+ ++ + DD V E + + L+ + N
Sbjct: 615 CGALRNLARNEDNKNMISRQNGIQLVLGAMSNHPDDPDVQDEGCAALINLAYQDEANEET 674
Query: 439 AMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPEN 479
G +L ++AM P +Q ++NL NP+N
Sbjct: 675 IAREGGINLILKAMRNHPFHSGVQMQGRGALKNLSC-NPKN 714
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 371 NKTVARICCSLLSKLA----GSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIIT 426
N + R C +L +L+ D ++S I GG+ ++ DA V ++ +
Sbjct: 422 NPMILRETCYILKRLSYRQRKEDEHESLIARYGGISLILQAMKNHPYDAGVQEDACGALG 481
Query: 427 VLSLRSPENAA--------RAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARN 476
L+ SP N +E G L +QAM +Q ++ F++RNL ARN
Sbjct: 482 NLTCDSPNNMGLYSNDNYLSVVEQGGIQLILQAMKNHMMNPGVQYNTSFVLRNL-ARN 538
>sp|Q5S007|LRRK2_HUMAN Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo
sapiens GN=LRRK2 PE=1 SV=2
Length = 2527
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 370 GNKTVARICCSLLSKLAG--SDSNKSAIIENGGMDKLIVVSA--RFSDDASVLQEVMSII 425
N V ++ C L L S+ + +EN D +I++SA F D+ ++ V+ +
Sbjct: 172 ANDEVQKLGCKALHVLFERVSEEQLTEFVENK--DYMILLSALTNFKDEEEIVLHVLHCL 229
Query: 426 TVLSLRSPENAARAMEAGS---GDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENSFC 482
L++ P N + +G+ ++ ++AM FP ++++Q SC ++ L N F
Sbjct: 230 HSLAI--PCNNVEVLMSGNVRCYNIVVEAMKAFPMSERIQEVSCCLLHRLTLGN----FF 283
Query: 483 SVMVSRNLSDRQRRTTKSARMQP 505
+++V L++ K+ + P
Sbjct: 284 NILV---LNEVHEFVVKAVQQYP 303
>sp|P0CM60|VAC8_CRYNJ Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=VAC8 PE=3
SV=1
Length = 630
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 317 LVHSLHAGLSSPSL---ISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKT 373
LV SL + S SL A++AL+ +A + + + + GG+ LLR + S L
Sbjct: 253 LVQSLVQLMDSQSLKVQCQAALALRNLASDSKYQLEIVKFGGLKPLLRLLHSSYLP--LI 310
Query: 374 VARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSP 433
++ C + ++ +N+S IIE+G + LI + + F ++ V +S + L+ S
Sbjct: 311 LSAAAC--VRNVSIHPANESPIIESGFLQPLIELLS-FDENEEVQCHAISTLRNLAASSE 367
Query: 434 ENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
+N +EAG+ + +L P A Q + ++C +
Sbjct: 368 KNKGAIVEAGAVEKIKSLVLTVPLAVQSEMTACVAV 403
>sp|P0CM61|VAC8_CRYNB Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=VAC8 PE=3 SV=1
Length = 630
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 317 LVHSLHAGLSSPSL---ISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKT 373
LV SL + S SL A++AL+ +A + + + + GG+ LLR + S L
Sbjct: 253 LVQSLVQLMDSQSLKVQCQAALALRNLASDSKYQLEIVKFGGLKPLLRLLHSSYLP--LI 310
Query: 374 VARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSP 433
++ C + ++ +N+S IIE+G + LI + + F ++ V +S + L+ S
Sbjct: 311 LSAAAC--VRNVSIHPANESPIIESGFLQPLIELLS-FDENEEVQCHAISTLRNLAASSE 367
Query: 434 ENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
+N +EAG+ + +L P A Q + ++C +
Sbjct: 368 KNKGAIVEAGAVEKIKSLVLTVPLAVQSEMTACVAV 403
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 50 LTAHEMGPPKTVRTISQEAFDEVVKENMEDLGMEPTEALQDAIQTLSLQGVDLSGIVK-- 107
+ H++ PK +RT + F E V + +++ G E A+Q ++L G D+ G+
Sbjct: 104 IVGHDV--PKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATG 161
Query: 108 -------CVPGESSLKDNPLI 121
C+PG + PL+
Sbjct: 162 SGKTLSYCLPGIVHINAQPLL 182
>sp|Q17GS9|ARM_AEDAE Armadillo segment polarity protein OS=Aedes aegypti GN=arm PE=3
SV=1
Length = 832
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 349 SVAENGGIDALLRCIDDSGLQGNKTVARICC--SLLSKLAGSDSNKSAIIENGGMDKLIV 406
+V + GG++AL+ I ++G + T +C L S+ S+S ++ I+ NG +IV
Sbjct: 442 TVCQVGGVEALVGTIINAGDREEITEPAVCALRHLTSRHPESESAQN-IVRNGYGLPVIV 500
Query: 407 VSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSC 466
+++ V+ +I L+L P NAA E G+ L ++ + K Q QRSS
Sbjct: 501 KLLNPPSRWPLIKAVIGLIRNLAL-CPSNAAPLREHGAIHLLVRLLFKAFQDTQRQRSSV 559
>sp|A2AFR3|FRPD4_MOUSE FERM and PDZ domain-containing protein 4 OS=Mus musculus GN=Frmpd4
PE=1 SV=1
Length = 1320
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 268 EILSRQRNDSIQSLYDAIRVLLTPDDD--QVVASQVY---GYARRF-AKIGIARALVHSL 321
E+L +QRN I S D + LTPD D Q VA+ VY G + F A GI L+H +
Sbjct: 680 EMLEKQRNLYISSANDMKNLDLTPDTDSIQFVANSVYANIGDVKNFEAPEGIEEPLLHDI 739
>sp|Q02453|ARM_MUSDO Armadillo segment polarity protein OS=Musca domestica GN=arm PE=2
SV=1
Length = 813
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 349 SVAENGGIDALLRCIDDSGLQGNKTVARICC--SLLSKLAGSDSNKSAIIENGGMD---K 403
+V + GG+DAL+R I ++G + T +C L ++ A S+ ++A+ N G+ K
Sbjct: 435 TVCQVGGVDALVRTIINAGDREEITEPAVCALRHLTTRHADSEMAQNAVRLNYGLSVIVK 494
Query: 404 LIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQR 463
L+ +R+ +++ + ++ L+L P NAA E G+ ++ +++ + QR
Sbjct: 495 LLHPPSRW----PLIKAAIGLVRNLAL-CPANAAPLREHGAIHHLVRLLMRAFQDTERQR 549
Query: 464 SS 465
SS
Sbjct: 550 SS 551
>sp|Q7QHW5|ARM_ANOGA Armadillo segment polarity protein OS=Anopheles gambiae GN=arm PE=3
SV=5
Length = 850
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 349 SVAENGGIDALLRCIDDSGLQGNKTVARICC--SLLSKLAGSDSNKSAIIENGGMDKLIV 406
+V + GG++AL+ I ++G + T +C L S+ S+S ++ ++ NG +IV
Sbjct: 442 TVCQVGGVEALVGTIINAGDREEITEPAVCALRHLTSRHPESESAQN-VVRNGYGLPVIV 500
Query: 407 VSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSC 466
+++ V+ +I L+L P NAA E G+ L ++ + K Q QRSS
Sbjct: 501 KLLNPPSRWPLIKAVIGLIRNLAL-CPANAAPLREHGAIHLLVRLLFKAFQDTQRQRSSV 559
>sp|Q8YAS0|ARCA_LISMO Arginine deiminase OS=Listeria monocytogenes serovar 1/2a (strain
ATCC BAA-679 / EGD-e) GN=arcA PE=3 SV=1
Length = 410
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 157 CGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTG 216
CGG + V+A +G L + + +V + L++ + VH+V S+E R
Sbjct: 335 CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGR 394
Query: 217 GGPKLLVNILIDGN 230
GGP+ + L+ N
Sbjct: 395 GGPRCMTMPLVREN 408
>sp|Q725C1|ARCA_LISMF Arginine deiminase OS=Listeria monocytogenes serotype 4b (strain
F2365) GN=arcA PE=3 SV=1
Length = 410
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 157 CGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTG 216
CGG + V+A +G L + + +V + L++ + VH+V S+E R
Sbjct: 335 CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGR 394
Query: 217 GGPKLLVNILIDGN 230
GGP+ + L+ N
Sbjct: 395 GGPRCMTMPLVREN 408
>sp|C1KV84|ARCA_LISMC Arginine deiminase OS=Listeria monocytogenes serotype 4b (strain
CLIP80459) GN=arcA PE=3 SV=1
Length = 410
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 157 CGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTG 216
CGG + V+A +G L + + +V + L++ + VH+V S+E R
Sbjct: 335 CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGR 394
Query: 217 GGPKLLVNILIDGN 230
GGP+ + L+ N
Sbjct: 395 GGPRCMTMPLVREN 408
>sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp2 PE=2 SV=2
Length = 550
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 49 DLTAHEMGPPKTVRTISQEAFDEVVKENMEDLGMEPTEALQDAIQTLSLQGVDLSGIVKC 108
++ H + PK V T + F V + ++ LG E +Q +++ G D+ GI
Sbjct: 109 EIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISAT 168
Query: 109 VPGES 113
G++
Sbjct: 169 GSGKT 173
>sp|P18824|ARM_DROME Armadillo segment polarity protein OS=Drosophila melanogaster
GN=arm PE=1 SV=1
Length = 843
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 349 SVAENGGIDALLRCIDDSGLQGNKTVARICC--SLLSKLAGSDSNKSAIIENGGMD---K 403
+V + GG+DAL+R I ++G + T +C L S+ S+ ++A+ N G+ K
Sbjct: 445 TVCQVGGVDALVRTIINAGDREEITEPAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVK 504
Query: 404 LIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQR 463
L+ +R+ +++ V+ +I L+L P N A E G+ ++ +++ + QR
Sbjct: 505 LLHPPSRW----PLIKAVIGLIRNLAL-CPANHAPLREHGAIHHLVRLLMRAFQDTERQR 559
Query: 464 SS 465
SS
Sbjct: 560 SS 561
>sp|Q68FH0|PKP4_MOUSE Plakophilin-4 OS=Mus musculus GN=Pkp4 PE=1 SV=1
Length = 1190
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 371 NKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASV 417
++TVA ICC+L + + N A+ ++GG++KL+ ++ D +S+
Sbjct: 931 DETVAAICCALHEVTSKNMENAKALADSGGIEKLVNITKGRGDRSSL 977
>sp|Q29I35|ARM_DROPS Armadillo segment polarity protein OS=Drosophila pseudoobscura
pseudoobscura GN=arm PE=3 SV=2
Length = 832
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 349 SVAENGGIDALLRCIDDSGLQGNKTVARICC--SLLSKLAGSDSNKSAIIENGGMD---K 403
+V + GG+DAL+R I ++G + T +C L S+ S+ ++A+ N G+ K
Sbjct: 445 TVCQVGGVDALVRTIINAGDREEITEPAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVK 504
Query: 404 LIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQR 463
L+ +R+ +++ V+ +I L+L P N A E G+ ++ +++ + QR
Sbjct: 505 LLHPPSRW----PLIKAVIGLIRNLAL-CPANHAPLREHGAIHHLVRLLMRAFQDTERQR 559
Query: 464 SS 465
SS
Sbjct: 560 SS 561
>sp|Q92FR7|ARCA_LISIN Arginine deiminase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=arcA PE=3 SV=1
Length = 408
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 157 CGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTG 216
CGG + V+A +G L + + V + L+ + VH+V S+E R
Sbjct: 333 CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNHVSNDLLRKAGIKVHEVISSELSRGR 392
Query: 217 GGPKLLVNILIDGN 230
GGP+ + + GN
Sbjct: 393 GGPRCMTMPITRGN 406
>sp|P26233|CTNB_XENLA Catenin beta OS=Xenopus laevis GN=ctnnb1 PE=1 SV=1
Length = 781
Score = 32.7 bits (73), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 300 QVYGYARRFAKI-----GIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENG 354
Q+ Y + +K+ G +ALV+ + L + S LK ++V ++ E G
Sbjct: 302 QILAYGNQESKLIILASGGPQALVNIMRTYSYEKLLWTTSRVLKVLSVCSSNKPAIVEAG 361
Query: 355 GIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLI--VVSARFS 412
G+ AL + DS ++ + + C L L+ A + GM+ L+ +V S
Sbjct: 362 GMQALGLHLTDS----SQRLVQNCLWTLRNLS------DAATKQEGMEGLLGTLVQLLGS 411
Query: 413 DDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNL 472
DD +V+ I++ L+ + +N + G + ++ +L+ + + + + +R+L
Sbjct: 412 DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL 471
Query: 473 VARNPE 478
+R+ E
Sbjct: 472 TSRHQE 477
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,271,184
Number of Sequences: 539616
Number of extensions: 7164356
Number of successful extensions: 22878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 22765
Number of HSP's gapped (non-prelim): 143
length of query: 508
length of database: 191,569,459
effective HSP length: 122
effective length of query: 386
effective length of database: 125,736,307
effective search space: 48534214502
effective search space used: 48534214502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)