Query 010535
Match_columns 508
No_of_seqs 180 out of 2031
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 01:40:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 3.1E-71 6.6E-76 547.3 48.1 481 23-508 53-542 (691)
2 PLN02861 long-chain-fatty-acid 100.0 1.4E-69 3E-74 573.2 55.3 507 1-508 1-508 (660)
3 PLN02614 long-chain acyl-CoA s 100.0 1.2E-67 2.6E-72 558.0 55.3 496 12-508 14-511 (666)
4 PLN02430 long-chain-fatty-acid 100.0 3.3E-65 7.2E-70 538.9 55.5 493 16-508 15-508 (660)
5 PTZ00342 acyl-CoA synthetase; 100.0 7.6E-65 1.6E-69 535.4 52.6 471 20-508 40-585 (746)
6 PLN02736 long-chain acyl-CoA s 100.0 8.6E-65 1.9E-69 537.6 53.0 489 5-508 8-502 (651)
7 COG1022 FAA1 Long-chain acyl-C 100.0 3.6E-65 7.8E-70 512.5 44.0 441 40-508 13-464 (613)
8 KOG1180 Acyl-CoA synthetase [L 100.0 5.8E-63 1.3E-67 467.0 39.7 492 3-508 5-530 (678)
9 PLN02387 long-chain-fatty-acid 100.0 1.5E-61 3.3E-66 514.0 50.9 481 22-508 37-550 (696)
10 PTZ00216 acyl-CoA synthetase; 100.0 1.5E-60 3.2E-65 507.7 50.7 478 18-508 40-551 (700)
11 KOG1177 Long chain fatty acid 100.0 1.4E-59 3.1E-64 436.9 33.4 411 29-508 36-476 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 1.5E-59 3.2E-64 468.5 35.1 393 50-508 23-423 (537)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 5.6E-58 1.2E-62 473.0 41.0 399 40-508 8-416 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 1.3E-57 2.7E-62 452.1 35.7 388 47-508 13-411 (528)
15 PTZ00237 acetyl-CoA synthetase 100.0 5.1E-55 1.1E-59 461.2 36.6 417 41-508 57-507 (647)
16 PLN02654 acetate-CoA ligase 100.0 2.2E-54 4.9E-59 457.8 40.6 412 43-508 88-528 (666)
17 PRK07529 AMP-binding domain pr 100.0 1.2E-53 2.5E-58 450.8 42.8 413 41-508 23-460 (632)
18 PLN02860 o-succinylbenzoate-Co 100.0 1E-53 2.2E-58 446.5 40.4 399 41-508 5-429 (563)
19 PRK06334 long chain fatty acid 100.0 8.8E-54 1.9E-58 443.9 39.5 392 41-508 17-425 (539)
20 PRK08180 feruloyl-CoA synthase 100.0 2.3E-53 4.9E-58 447.7 43.0 395 41-508 37-459 (614)
21 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.2E-53 2.5E-58 451.6 39.6 409 42-508 56-490 (625)
22 PRK07788 acyl-CoA synthetase; 100.0 1.7E-53 3.8E-58 444.1 39.9 393 43-508 49-442 (549)
23 PRK12582 acyl-CoA synthetase; 100.0 6.7E-53 1.4E-57 445.0 43.5 392 40-503 46-462 (624)
24 PRK00174 acetyl-CoA synthetase 100.0 8.4E-53 1.8E-57 445.8 40.5 406 44-508 68-498 (637)
25 PRK04319 acetyl-CoA synthetase 100.0 5.5E-53 1.2E-57 441.9 38.6 400 42-508 42-447 (570)
26 PF00501 AMP-binding: AMP-bind 100.0 1.5E-53 3.3E-58 429.8 32.6 389 49-508 1-403 (417)
27 PRK13295 cyclohexanecarboxylat 100.0 3.3E-52 7E-57 434.1 43.5 396 42-508 23-434 (547)
28 TIGR02316 propion_prpE propion 100.0 9.9E-53 2.2E-57 444.0 39.2 410 42-508 51-487 (628)
29 PLN02574 4-coumarate--CoA liga 100.0 3.1E-52 6.8E-57 435.1 40.0 418 23-508 22-445 (560)
30 PRK05857 acyl-CoA synthetase; 100.0 2.7E-52 5.9E-57 433.6 36.8 404 35-508 6-417 (540)
31 PLN02246 4-coumarate--CoA liga 100.0 2.6E-51 5.6E-56 426.6 42.9 415 21-508 5-427 (537)
32 PRK07656 long-chain-fatty-acid 100.0 1.3E-51 2.8E-56 427.2 40.5 400 40-508 2-407 (513)
33 PRK05677 long-chain-fatty-acid 100.0 4.3E-51 9.3E-56 426.9 42.6 405 41-508 22-448 (562)
34 PRK08314 long-chain-fatty-acid 100.0 3E-51 6.4E-56 427.4 40.7 402 42-508 9-431 (546)
35 PRK13382 acyl-CoA synthetase; 100.0 3.3E-51 7.1E-56 425.2 40.4 388 43-508 43-431 (537)
36 PRK06187 long-chain-fatty-acid 100.0 5.2E-51 1.1E-55 423.5 39.9 402 40-508 3-410 (521)
37 PRK03640 O-succinylbenzoic aci 100.0 5.9E-51 1.3E-55 418.9 39.7 372 42-508 1-375 (483)
38 COG1021 EntE Peptide arylation 100.0 1.1E-52 2.5E-57 382.3 23.4 394 41-508 26-429 (542)
39 PLN02330 4-coumarate--CoA liga 100.0 1.2E-50 2.5E-55 422.4 42.1 412 21-508 10-432 (546)
40 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.8E-50 3.9E-55 420.4 43.4 408 27-508 10-432 (538)
41 PRK10524 prpE propionyl-CoA sy 100.0 3.5E-51 7.6E-56 433.1 38.5 408 43-508 53-488 (629)
42 PRK05605 long-chain-fatty-acid 100.0 9.9E-51 2.1E-55 425.6 40.5 407 42-508 31-460 (573)
43 PRK09274 peptide synthase; Pro 100.0 5.6E-51 1.2E-55 425.7 38.4 392 43-508 6-435 (552)
44 PRK08008 caiC putative crotono 100.0 1.4E-50 3E-55 419.5 41.0 401 42-508 6-413 (517)
45 PRK07638 acyl-CoA synthetase; 100.0 8.5E-51 1.8E-55 417.9 38.8 374 43-508 1-376 (487)
46 PRK05620 long-chain-fatty-acid 100.0 3.4E-50 7.4E-55 421.4 43.8 413 39-508 6-445 (576)
47 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.5E-50 3.4E-55 419.8 40.7 393 42-508 22-423 (527)
48 PRK08316 acyl-CoA synthetase; 100.0 1.4E-50 3.1E-55 420.4 40.0 398 41-508 9-410 (523)
49 PRK06087 short chain acyl-CoA 100.0 4.2E-50 9E-55 418.6 42.3 396 41-508 21-425 (547)
50 PRK06155 crotonobetaine/carnit 100.0 3.1E-50 6.6E-55 418.2 41.0 397 37-508 15-415 (542)
51 PRK06839 acyl-CoA synthetase; 100.0 1.9E-50 4.2E-55 416.6 38.9 381 43-508 2-386 (496)
52 PRK07008 long-chain-fatty-acid 100.0 6.4E-50 1.4E-54 415.9 41.5 402 42-508 9-424 (539)
53 PRK05852 acyl-CoA synthetase; 100.0 3.1E-50 6.7E-55 418.2 39.2 401 40-508 13-423 (534)
54 PRK07786 long-chain-fatty-acid 100.0 3.8E-50 8.2E-55 418.1 39.5 395 40-508 14-414 (542)
55 PRK07769 long-chain-fatty-acid 100.0 1.5E-50 3.3E-55 428.1 37.0 396 40-508 18-478 (631)
56 PRK07470 acyl-CoA synthetase; 100.0 2.1E-50 4.6E-55 419.2 37.2 394 41-508 5-409 (528)
57 PRK12492 long-chain-fatty-acid 100.0 4.9E-50 1.1E-54 418.9 39.8 408 42-508 23-456 (562)
58 PRK06060 acyl-CoA synthetase; 100.0 2.1E-50 4.6E-55 431.9 37.6 368 43-508 4-380 (705)
59 PRK03584 acetoacetyl-CoA synth 100.0 6.2E-50 1.4E-54 425.0 39.8 405 41-508 84-513 (655)
60 PRK08633 2-acyl-glycerophospho 100.0 3.5E-50 7.6E-55 454.4 39.3 403 37-508 609-1034(1146)
61 PLN03102 acyl-activating enzym 100.0 1.1E-49 2.3E-54 416.9 39.9 400 42-508 13-435 (579)
62 PRK08043 bifunctional acyl-[ac 100.0 3.7E-50 8E-55 430.2 37.1 386 41-508 202-606 (718)
63 PRK06145 acyl-CoA synthetase; 100.0 1.4E-49 3E-54 410.2 40.0 384 42-508 1-388 (497)
64 PLN03052 acetate--CoA ligase; 100.0 1.5E-49 3.3E-54 422.0 41.2 404 41-508 172-604 (728)
65 PRK07514 malonyl-CoA synthase; 100.0 2.1E-49 4.5E-54 409.7 41.0 388 42-508 2-392 (504)
66 PRK10946 entE enterobactin syn 100.0 1.6E-49 3.5E-54 412.7 39.8 392 42-508 24-424 (536)
67 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.8E-49 4E-54 411.2 39.9 395 44-508 1-409 (515)
68 TIGR03443 alpha_am_amid L-amin 100.0 4E-50 8.7E-55 460.0 37.3 403 42-508 235-693 (1389)
69 PRK12476 putative fatty-acid-- 100.0 8.5E-50 1.8E-54 420.7 36.5 392 41-508 32-490 (612)
70 PRK06188 acyl-CoA synthetase; 100.0 1.9E-49 4.1E-54 411.7 38.3 392 41-508 10-408 (524)
71 PRK08315 AMP-binding domain pr 100.0 3.9E-49 8.4E-54 412.7 40.6 399 40-508 13-442 (559)
72 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.8E-49 6E-54 418.3 39.3 406 40-508 84-514 (652)
73 PRK07059 Long-chain-fatty-acid 100.0 5.1E-49 1.1E-53 411.2 39.9 410 40-508 20-450 (557)
74 TIGR03205 pimA dicarboxylate-- 100.0 1.2E-48 2.6E-53 406.9 41.8 409 41-508 19-436 (541)
75 TIGR02262 benz_CoA_lig benzoat 100.0 9E-49 1.9E-53 405.0 39.8 392 42-508 3-399 (508)
76 PRK12583 acyl-CoA synthetase; 100.0 1.1E-48 2.4E-53 409.2 40.7 398 41-508 16-443 (558)
77 PRK06164 acyl-CoA synthetase; 100.0 1.2E-48 2.5E-53 407.2 39.2 400 40-508 7-421 (540)
78 PRK12467 peptide synthase; Pro 100.0 2E-49 4.3E-54 482.9 37.5 379 40-508 3092-3486(3956)
79 PRK06710 long-chain-fatty-acid 100.0 2.1E-48 4.6E-53 407.1 40.0 407 41-508 22-446 (563)
80 PRK06018 putative acyl-CoA syn 100.0 3.3E-48 7.2E-53 403.6 40.8 403 41-508 8-425 (542)
81 PRK10252 entF enterobactin syn 100.0 9E-49 2E-53 447.3 40.0 379 42-508 457-852 (1296)
82 PRK09088 acyl-CoA synthetase; 100.0 1.2E-48 2.7E-53 402.1 36.9 366 50-508 2-376 (488)
83 PRK08751 putative long-chain f 100.0 2.8E-48 6.1E-53 406.0 40.2 407 42-508 24-452 (560)
84 PRK06178 acyl-CoA synthetase; 100.0 3.4E-48 7.4E-53 405.9 40.5 409 38-508 28-457 (567)
85 PLN02479 acetate-CoA ligase 100.0 4.3E-48 9.4E-53 404.5 40.2 407 43-508 20-445 (567)
86 PRK13383 acyl-CoA synthetase; 100.0 3.1E-48 6.7E-53 401.5 38.7 378 41-508 33-411 (516)
87 PRK13388 acyl-CoA synthetase; 100.0 6.2E-48 1.3E-52 400.7 38.3 378 43-508 3-395 (540)
88 PRK05851 long-chain-fatty-acid 100.0 1.9E-48 4.2E-53 403.4 32.2 374 44-508 3-410 (525)
89 PRK08974 long-chain-fatty-acid 100.0 2.4E-47 5.1E-52 398.9 40.2 406 42-508 22-447 (560)
90 PRK12316 peptide synthase; Pro 100.0 3.1E-48 6.8E-53 479.5 39.1 380 41-508 2001-2396(5163)
91 PRK12467 peptide synthase; Pro 100.0 6.2E-48 1.3E-52 469.8 40.3 381 41-508 1572-1969(3956)
92 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.2E-47 2.6E-52 396.3 35.7 374 44-506 1-387 (502)
93 PRK12316 peptide synthase; Pro 100.0 8E-48 1.7E-52 475.9 39.4 379 42-508 510-901 (5163)
94 PRK07867 acyl-CoA synthetase; 100.0 7.7E-47 1.7E-51 391.3 40.0 376 42-508 4-396 (529)
95 PRK05691 peptide synthase; Val 100.0 1.3E-47 2.8E-52 470.9 39.2 382 41-508 3718-4117(4334)
96 PRK08279 long-chain-acyl-CoA s 100.0 4.5E-47 9.7E-52 399.8 37.6 412 17-508 13-454 (600)
97 PRK13390 acyl-CoA synthetase; 100.0 4.6E-47 1E-51 391.5 37.0 381 50-508 4-394 (501)
98 PRK07787 acyl-CoA synthetase; 100.0 6.6E-47 1.4E-51 387.1 36.3 353 53-508 10-365 (471)
99 PRK08162 acyl-CoA synthetase; 100.0 2.9E-46 6.3E-51 389.7 41.2 401 43-508 18-431 (545)
100 PRK06814 acylglycerophosphoeth 100.0 8.9E-47 1.9E-51 425.2 38.9 392 40-508 628-1025(1140)
101 PRK09192 acyl-CoA synthetase; 100.0 4.3E-47 9.4E-52 398.0 33.7 393 35-508 13-453 (579)
102 PRK05691 peptide synthase; Val 100.0 4.8E-47 1E-51 465.9 38.2 378 41-508 1129-1520(4334)
103 PRK13391 acyl-CoA synthetase; 100.0 3.8E-46 8.2E-51 385.6 38.9 386 50-508 4-397 (511)
104 PRK04813 D-alanine--poly(phosp 100.0 3.8E-46 8.1E-51 385.4 38.9 376 43-508 2-390 (503)
105 PRK05850 acyl-CoA synthetase; 100.0 2.3E-46 5E-51 392.9 33.3 394 44-508 2-451 (578)
106 TIGR01733 AA-adenyl-dom amino 100.0 1.6E-45 3.5E-50 370.3 36.6 350 79-508 1-370 (408)
107 PRK07798 acyl-CoA synthetase; 100.0 9.2E-45 2E-49 377.8 42.4 399 44-508 4-423 (533)
108 PRK08276 long-chain-fatty-acid 100.0 1.5E-45 3.3E-50 380.4 34.8 371 76-508 10-384 (502)
109 PRK09029 O-succinylbenzoic aci 100.0 1.5E-45 3.2E-50 375.9 34.1 344 43-508 2-346 (458)
110 PTZ00297 pantothenate kinase; 100.0 2.7E-44 5.9E-49 393.8 46.0 425 40-504 424-856 (1452)
111 PRK07768 long-chain-fatty-acid 100.0 4.9E-45 1.1E-49 380.3 38.0 383 43-508 2-429 (545)
112 PRK12406 long-chain-fatty-acid 100.0 3.9E-45 8.4E-50 378.0 36.3 375 76-508 10-394 (509)
113 PRK07445 O-succinylbenzoic aci 100.0 7.9E-45 1.7E-49 368.0 32.4 317 78-508 20-339 (452)
114 TIGR01923 menE O-succinylbenzo 100.0 2.4E-44 5.3E-49 365.0 34.3 334 79-508 1-335 (436)
115 KOG1179 Very long-chain acyl-C 100.0 3.8E-44 8.2E-49 341.0 32.2 396 40-508 74-503 (649)
116 PLN03051 acyl-activating enzym 100.0 5.4E-44 1.2E-48 367.6 31.3 343 109-508 1-372 (499)
117 KOG1175 Acyl-CoA synthetase [L 100.0 1.5E-43 3.2E-48 352.1 33.2 404 40-508 60-490 (626)
118 PRK07868 acyl-CoA synthetase; 100.0 7.5E-43 1.6E-47 382.7 36.1 387 40-508 444-851 (994)
119 PRK08308 acyl-CoA synthetase; 100.0 1.7E-40 3.6E-45 334.0 34.0 298 76-508 7-306 (414)
120 COG1020 EntF Non-ribosomal pep 100.0 2.2E-34 4.7E-39 306.0 35.9 380 40-508 224-611 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 4.3E-28 9.4E-33 239.1 21.0 210 217-508 32-248 (358)
122 KOG3628 Predicted AMP-binding 99.9 2.8E-25 6.1E-30 225.5 27.2 403 43-505 770-1231(1363)
123 TIGR03089 conserved hypothetic 99.9 1.2E-25 2.6E-30 204.5 22.4 222 49-314 2-227 (227)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 4.1E-24 8.8E-29 215.2 22.1 226 218-506 73-302 (422)
125 TIGR02372 4_coum_CoA_lig 4-cou 99.9 1.7E-22 3.7E-27 198.6 17.8 191 220-508 95-290 (386)
126 TIGR03335 F390_ftsA coenzyme F 99.9 2.8E-20 6E-25 187.5 22.6 224 217-504 83-309 (445)
127 KOG1178 Non-ribosomal peptide 99.7 7.4E-17 1.6E-21 169.8 17.3 332 41-426 34-371 (1032)
128 KOG3628 Predicted AMP-binding 99.7 1.6E-15 3.5E-20 155.3 19.1 405 41-507 92-585 (1363)
129 COG1541 PaaK Coenzyme F390 syn 99.7 3.4E-15 7.3E-20 143.5 20.1 228 215-505 85-314 (438)
130 TIGR02304 aden_form_hyp probab 99.3 1.2E-10 2.6E-15 115.3 19.5 147 223-424 102-252 (430)
131 PF04443 LuxE: Acyl-protein sy 98.7 3.9E-06 8.4E-11 81.4 21.1 223 218-506 87-331 (365)
132 PF03321 GH3: GH3 auxin-respon 96.2 0.027 5.8E-07 58.2 10.0 32 216-247 76-108 (528)
133 PLN02247 indole-3-acetic acid- 95.2 2.1 4.5E-05 44.6 18.5 32 219-250 88-120 (606)
134 PRK09188 serine/threonine prot 95.1 0.011 2.4E-07 57.6 1.8 19 490-508 206-225 (365)
135 COG1541 PaaK Coenzyme F390 syn 94.5 0.29 6.2E-06 48.4 9.9 109 74-183 106-221 (438)
136 PLN02620 indole-3-acetic acid- 94.2 4.1 9E-05 42.5 17.9 30 218-247 99-129 (612)
137 PLN02249 indole-3-acetic acid- 94.2 0.86 1.9E-05 47.6 13.1 30 217-246 97-127 (597)
138 TIGR03335 F390_ftsA coenzyme F 83.2 9.2 0.0002 38.8 10.2 83 76-161 104-188 (445)
139 TIGR02155 PA_CoA_ligase phenyl 82.9 7.6 0.00016 39.1 9.4 88 77-165 94-183 (422)
140 PRK07656 long-chain-fatty-acid 79.1 29 0.00062 35.7 12.4 105 56-166 164-272 (513)
141 PRK06187 long-chain-fatty-acid 75.3 53 0.0012 33.7 13.2 120 57-182 166-291 (521)
142 TIGR01733 AA-adenyl-dom amino 73.4 65 0.0014 31.8 12.9 122 56-182 118-244 (408)
143 PF00501 AMP-binding: AMP-bind 70.8 43 0.00093 33.3 10.9 90 218-318 8-99 (417)
144 TIGR01923 menE O-succinylbenzo 69.8 48 0.001 33.2 11.1 116 57-181 110-228 (436)
145 TIGR03089 conserved hypothetic 68.0 40 0.00087 30.6 9.0 54 95-150 171-226 (227)
146 PRK08315 AMP-binding domain pr 67.9 70 0.0015 33.4 12.2 102 56-162 197-302 (559)
147 KOG1176 Acyl-CoA synthetase [L 67.3 78 0.0017 33.0 11.8 92 237-329 43-136 (537)
148 PRK06334 long chain fatty acid 65.1 1.2E+02 0.0026 31.5 13.2 122 56-182 181-309 (539)
149 COG4009 Uncharacterized protei 64.2 27 0.0006 25.2 5.3 65 77-152 9-76 (88)
150 PRK12583 acyl-CoA synthetase; 62.9 1E+02 0.0022 32.1 12.3 101 56-161 199-303 (558)
151 PRK04319 acetyl-CoA synthetase 62.0 1.4E+02 0.003 31.4 13.0 105 56-165 203-311 (570)
152 PLN02565 cysteine synthase 60.5 84 0.0018 30.3 10.1 69 90-158 53-122 (322)
153 PLN03051 acyl-activating enzym 59.4 1E+02 0.0022 31.7 11.3 104 57-165 118-224 (499)
154 PLN03052 acetate--CoA ligase; 58.3 1.1E+02 0.0025 33.3 11.8 101 218-322 188-290 (728)
155 PRK09274 peptide synthase; Pro 57.4 1E+02 0.0022 32.2 11.0 99 219-320 20-121 (552)
156 TIGR03098 ligase_PEP_1 acyl-Co 56.8 2.2E+02 0.0047 29.2 13.3 86 76-165 179-265 (515)
157 KOG1177 Long chain fatty acid 56.6 56 0.0012 32.9 7.9 86 237-325 75-162 (596)
158 COG0399 WecE Predicted pyridox 53.5 67 0.0015 31.6 8.1 65 88-156 60-129 (374)
159 PLN03102 acyl-activating enzym 53.1 1.4E+02 0.003 31.5 11.3 85 239-326 39-125 (579)
160 PRK11761 cysM cysteine synthas 52.2 1.3E+02 0.0028 28.6 9.7 67 90-157 50-117 (296)
161 TIGR02188 Ac_CoA_lig_AcsA acet 51.5 1.4E+02 0.003 31.8 11.1 99 218-322 70-170 (625)
162 PTZ00237 acetyl-CoA synthetase 51.4 1.9E+02 0.0042 30.9 12.1 80 238-320 91-172 (647)
163 PRK13295 cyclohexanecarboxylat 51.4 1.5E+02 0.0033 30.8 11.2 97 219-321 38-136 (547)
164 PRK07788 acyl-CoA synthetase; 50.9 1E+02 0.0022 32.1 9.8 85 239-326 74-160 (549)
165 PRK03584 acetoacetyl-CoA synth 50.7 1.8E+02 0.0039 31.2 11.8 97 219-322 98-196 (655)
166 COG0796 MurI Glutamate racemas 50.5 1.5E+02 0.0032 27.7 9.2 82 47-135 19-100 (269)
167 PRK08316 acyl-CoA synthetase; 50.5 1.7E+02 0.0038 30.0 11.4 88 238-328 35-124 (523)
168 cd01445 TST_Repeats Thiosulfat 50.4 49 0.0011 27.2 5.8 43 88-130 81-126 (138)
169 PRK03640 O-succinylbenzoic aci 49.8 2.3E+02 0.005 28.7 12.1 120 56-181 139-263 (483)
170 PLN02860 o-succinylbenzoate-Co 49.4 1.8E+02 0.0038 30.5 11.3 104 56-165 170-276 (563)
171 PLN02736 long-chain acyl-CoA s 49.4 2.6E+02 0.0056 30.0 12.7 88 238-328 77-166 (651)
172 PLN02654 acetate-CoA ligase 48.4 2E+02 0.0043 31.0 11.7 83 237-322 118-202 (666)
173 PRK00174 acetyl-CoA synthetase 48.3 2E+02 0.0044 30.6 11.8 99 218-322 80-180 (637)
174 PRK06155 crotonobetaine/carnit 48.2 1.4E+02 0.0031 31.0 10.4 87 238-327 45-133 (542)
175 TIGR02379 ECA_wecE TDP-4-keto- 48.0 70 0.0015 31.6 7.5 59 93-155 62-125 (376)
176 PRK08043 bifunctional acyl-[ac 47.8 2.7E+02 0.0059 30.3 12.7 101 56-161 363-467 (718)
177 TIGR01139 cysK cysteine syntha 47.7 1.8E+02 0.0039 27.6 10.0 66 93-159 47-113 (298)
178 PRK06188 acyl-CoA synthetase; 47.2 3.1E+02 0.0067 28.2 12.7 86 76-165 186-271 (524)
179 PRK06164 acyl-CoA synthetase; 47.2 1.6E+02 0.0036 30.4 10.6 104 56-165 179-285 (540)
180 TIGR01217 ac_ac_CoA_syn acetoa 46.5 2.4E+02 0.0051 30.3 11.9 96 220-322 99-196 (652)
181 PLN03013 cysteine synthase 45.8 1.8E+02 0.0039 29.3 9.8 66 93-158 164-230 (429)
182 COG0031 CysK Cysteine synthase 45.4 2.1E+02 0.0045 27.2 9.6 61 96-157 55-116 (300)
183 TIGR03590 PseG pseudaminic aci 45.1 1.6E+02 0.0034 27.7 9.1 90 85-183 18-112 (279)
184 PRK08279 long-chain-acyl-CoA s 45.1 2.1E+02 0.0046 30.2 11.2 86 238-326 61-148 (600)
185 PRK05857 acyl-CoA synthetase; 45.0 1.9E+02 0.0042 30.0 10.8 82 238-322 40-123 (540)
186 COG0318 CaiC Acyl-CoA syntheta 44.5 3.2E+02 0.007 28.4 12.2 93 219-321 25-119 (534)
187 PF01041 DegT_DnrJ_EryC1: DegT 44.3 67 0.0014 31.5 6.7 65 88-156 51-120 (363)
188 PRK08308 acyl-CoA synthetase; 43.5 3.4E+02 0.0074 26.9 13.4 105 56-166 99-207 (414)
189 PLN02246 4-coumarate--CoA liga 43.4 1.5E+02 0.0033 30.7 9.7 86 238-326 49-136 (537)
190 PRK11706 TDP-4-oxo-6-deoxy-D-g 43.2 99 0.0021 30.5 7.8 57 95-155 64-125 (375)
191 PLN02556 cysteine synthase/L-3 43.0 2.1E+02 0.0046 28.1 9.9 62 96-157 103-165 (368)
192 PRK00865 glutamate racemase; P 42.7 1.9E+02 0.0042 26.8 9.2 62 47-115 19-80 (261)
193 TIGR00067 glut_race glutamate 42.5 2.1E+02 0.0045 26.4 9.2 62 47-115 12-74 (251)
194 TIGR03443 alpha_am_amid L-amin 42.1 2.8E+02 0.006 33.0 12.5 122 56-182 413-539 (1389)
195 PRK13388 acyl-CoA synthetase; 42.0 2.5E+02 0.0055 29.1 11.1 86 238-326 25-113 (540)
196 PRK13383 acyl-CoA synthetase; 41.8 1.7E+02 0.0036 30.2 9.6 85 239-326 60-146 (516)
197 PLN00011 cysteine synthase 41.6 2.5E+02 0.0054 27.1 10.0 64 94-158 59-124 (323)
198 PRK10252 entF enterobactin syn 41.6 3.5E+02 0.0075 31.9 13.1 123 56-183 596-728 (1296)
199 PRK08633 2-acyl-glycerophospho 41.0 3.6E+02 0.0077 31.2 13.0 105 56-165 780-888 (1146)
200 PRK10717 cysteine synthase A; 40.9 2.4E+02 0.0053 27.2 9.9 63 95-158 56-119 (330)
201 TIGR02370 pyl_corrinoid methyl 40.7 2.6E+02 0.0056 24.7 11.2 57 267-323 85-146 (197)
202 PRK07798 acyl-CoA synthetase; 40.5 3.1E+02 0.0068 28.1 11.5 87 238-327 27-115 (533)
203 TIGR01136 cysKM cysteine synth 40.5 2.6E+02 0.0057 26.5 10.0 64 94-158 49-113 (299)
204 PRK07008 long-chain-fatty-acid 40.4 2.5E+02 0.0054 29.2 10.7 106 56-165 174-283 (539)
205 TIGR02262 benz_CoA_lig benzoat 40.2 3.1E+02 0.0068 28.0 11.4 103 56-162 159-265 (508)
206 TIGR01138 cysM cysteine syntha 40.1 3E+02 0.0064 26.0 10.2 62 95-157 51-113 (290)
207 PF05452 Clavanin: Clavanin; 39.9 16 0.00035 25.2 1.1 7 493-499 73-79 (80)
208 PRK08314 long-chain-fatty-acid 39.9 2.6E+02 0.0057 28.9 10.8 102 56-163 188-293 (546)
209 PRK08008 caiC putative crotono 39.8 3.9E+02 0.0084 27.4 12.0 85 239-326 37-123 (517)
210 PRK07529 AMP-binding domain pr 39.7 2.6E+02 0.0056 29.9 10.8 99 218-321 38-138 (632)
211 PRK05605 long-chain-fatty-acid 39.5 1.9E+02 0.0041 30.3 9.8 85 239-326 57-143 (573)
212 PLN02330 4-coumarate--CoA liga 39.3 2.5E+02 0.0053 29.2 10.5 86 238-326 54-141 (546)
213 TIGR03595 Obg_CgtA_exten Obg f 39.3 36 0.00079 24.2 2.9 19 90-108 45-63 (69)
214 PF09269 DUF1967: Domain of un 39.1 26 0.00056 24.9 2.1 23 85-107 40-62 (69)
215 COG0365 Acs Acyl-coenzyme A sy 39.0 2.8E+02 0.006 28.9 10.3 98 223-326 27-126 (528)
216 TIGR02275 DHB_AMP_lig 2,3-dihy 38.8 4.6E+02 0.0099 27.0 12.6 105 55-165 180-289 (527)
217 PF06543 Lac_bphage_repr: Lact 38.8 21 0.00045 22.9 1.3 26 386-411 22-47 (49)
218 PRK10696 tRNA 2-thiocytidine b 38.7 3.2E+02 0.007 25.2 10.2 71 86-156 12-94 (258)
219 PRK07514 malonyl-CoA synthase; 38.5 2.4E+02 0.0052 28.8 10.2 87 237-326 26-114 (504)
220 COG2236 Predicted phosphoribos 37.5 68 0.0015 28.2 4.8 33 76-108 5-37 (192)
221 KOG0023 Alcohol dehydrogenase, 37.4 3.9E+02 0.0084 25.8 10.1 72 93-167 173-244 (360)
222 PLN02574 4-coumarate--CoA liga 37.1 1.8E+02 0.0038 30.5 9.0 86 239-326 66-153 (560)
223 TIGR02316 propion_prpE propion 37.0 2E+02 0.0043 30.6 9.5 97 219-321 66-164 (628)
224 PRK09088 acyl-CoA synthetase; 36.9 4E+02 0.0086 27.0 11.5 82 238-322 21-104 (488)
225 PRK06839 acyl-CoA synthetase; 36.6 4.7E+02 0.01 26.5 12.0 88 237-326 25-114 (496)
226 PRK05850 acyl-CoA synthetase; 36.5 4.1E+02 0.0089 27.8 11.7 86 238-327 34-124 (578)
227 PLN02614 long-chain acyl-CoA s 35.9 5.9E+02 0.013 27.4 13.0 86 238-326 78-165 (666)
228 KOG0025 Zn2+-binding dehydroge 35.4 1.3E+02 0.0029 28.2 6.5 64 98-161 157-221 (354)
229 PRK08276 long-chain-fatty-acid 35.3 2.6E+02 0.0056 28.6 9.8 86 238-326 10-97 (502)
230 PRK07638 acyl-CoA synthetase; 35.0 5E+02 0.011 26.3 14.2 87 76-166 161-248 (487)
231 KOG1794 N-Acetylglucosamine ki 34.7 72 0.0016 29.8 4.7 75 384-461 70-146 (336)
232 PLN02861 long-chain-fatty-acid 34.5 3.4E+02 0.0073 29.2 10.8 87 238-327 76-164 (660)
233 cd01449 TST_Repeat_2 Thiosulfa 33.7 1.1E+02 0.0023 24.0 5.3 41 88-128 64-104 (118)
234 TIGR03208 cyc_hxne_CoA_lg cycl 33.4 4.3E+02 0.0093 27.3 11.2 83 237-322 51-135 (538)
235 TIGR03588 PseC UDP-4-keto-6-de 33.2 2.4E+02 0.0051 27.8 8.7 65 88-155 55-127 (380)
236 PRK05620 long-chain-fatty-acid 33.1 4.9E+02 0.011 27.2 11.6 105 56-163 179-286 (576)
237 PRK05852 acyl-CoA synthetase; 33.0 5.6E+02 0.012 26.4 13.4 88 76-166 194-284 (534)
238 PRK08162 acyl-CoA synthetase; 32.9 2.7E+02 0.0058 28.9 9.5 85 239-326 43-129 (545)
239 PRK10946 entE enterobactin syn 32.7 5.8E+02 0.012 26.4 12.4 104 56-165 180-288 (536)
240 PRK13382 acyl-CoA synthetase; 32.4 3.3E+02 0.0072 28.2 10.1 85 239-326 68-154 (537)
241 PRK11493 sseA 3-mercaptopyruva 32.1 87 0.0019 29.5 5.1 53 76-128 200-257 (281)
242 cd01561 CBS_like CBS_like: Thi 32.1 4.2E+02 0.009 24.9 9.8 65 94-159 44-109 (291)
243 PRK11658 UDP-4-amino-4-deoxy-L 32.1 2.1E+02 0.0045 28.3 8.0 62 89-154 60-126 (379)
244 PRK07059 Long-chain-fatty-acid 31.8 3.1E+02 0.0066 28.6 9.8 85 238-325 47-133 (557)
245 cd07050 BMC_EutL_repeat2 ethan 31.5 87 0.0019 22.9 3.7 39 92-130 4-43 (87)
246 TIGR01137 cysta_beta cystathio 31.2 3.9E+02 0.0084 27.1 10.1 64 94-158 53-117 (454)
247 PRK07787 acyl-CoA synthetase; 31.1 5.2E+02 0.011 26.1 11.1 102 56-164 126-231 (471)
248 PRK13391 acyl-CoA synthetase; 30.8 5.6E+02 0.012 26.2 11.5 99 218-326 10-110 (511)
249 PLN02479 acetate-CoA ligase 30.7 3.7E+02 0.008 28.1 10.2 85 239-326 45-131 (567)
250 PRK05677 long-chain-fatty-acid 30.7 5.1E+02 0.011 27.0 11.2 86 238-325 48-135 (562)
251 PRK10524 prpE propionyl-CoA sy 30.6 2.9E+02 0.0063 29.4 9.5 97 219-321 67-165 (629)
252 PRK06814 acylglycerophosphoeth 30.2 8.3E+02 0.018 28.3 13.7 121 56-181 791-916 (1140)
253 TIGR00936 ahcY adenosylhomocys 30.1 5E+02 0.011 26.0 10.1 66 98-163 28-95 (406)
254 PF00290 Trp_syntA: Tryptophan 30.1 4.5E+02 0.0099 24.4 9.7 88 43-149 69-164 (259)
255 cd06448 L-Ser-dehyd Serine deh 29.5 1.9E+02 0.0041 27.8 7.0 61 97-158 46-106 (316)
256 cd01519 RHOD_HSP67B2 Member of 29.4 1.5E+02 0.0032 22.6 5.3 53 76-128 36-92 (106)
257 TIGR01734 D-ala-DACP-lig D-ala 29.4 6.2E+02 0.013 25.7 13.5 103 56-163 139-246 (502)
258 PRK10595 SOS cell division inh 29.4 2.5E+02 0.0055 24.0 6.8 66 90-155 69-140 (164)
259 cd00640 Trp-synth-beta_II Tryp 29.2 4.4E+02 0.0095 23.9 10.0 64 94-158 42-105 (244)
260 PLN02387 long-chain-fatty-acid 29.2 4.4E+02 0.0095 28.6 10.6 88 238-328 105-194 (696)
261 COG1167 ARO8 Transcriptional r 28.8 2.6E+02 0.0056 28.5 8.2 58 262-323 175-237 (459)
262 KOG1138 Predicted cleavage and 28.8 2.1E+02 0.0045 29.1 6.9 66 96-161 412-478 (653)
263 PRK15407 lipopolysaccharide bi 28.0 2.3E+02 0.005 28.7 7.7 55 98-156 107-166 (438)
264 PRK06702 O-acetylhomoserine am 27.7 3E+02 0.0064 27.9 8.3 25 398-422 351-376 (432)
265 PLN02356 phosphateglycerate ki 27.6 4.8E+02 0.01 26.3 9.5 64 93-157 94-158 (423)
266 PRK12406 long-chain-fatty-acid 27.6 4.2E+02 0.0091 27.1 9.8 87 239-328 11-99 (509)
267 PRK06381 threonine synthase; V 27.2 2.3E+02 0.0051 27.1 7.3 62 94-159 58-119 (319)
268 PRK07476 eutB threonine dehydr 27.2 3.8E+02 0.0083 25.7 8.7 51 108-158 72-122 (322)
269 TIGR02372 4_coum_CoA_lig 4-cou 26.6 6.4E+02 0.014 25.0 13.9 116 40-163 77-198 (386)
270 PRK09162 hypoxanthine-guanine 26.6 1.8E+02 0.0039 25.2 5.8 50 76-127 15-64 (181)
271 PF05728 UPF0227: Uncharacteri 26.4 3.8E+02 0.0083 23.4 7.8 40 105-145 61-101 (187)
272 PRK07867 acyl-CoA synthetase; 26.2 4.6E+02 0.01 27.1 9.8 86 238-325 27-114 (529)
273 PLN02723 3-mercaptopyruvate su 25.9 1.4E+02 0.003 28.7 5.4 53 76-128 237-295 (320)
274 COG1064 AdhP Zn-dependent alco 25.8 3.4E+02 0.0074 26.4 7.8 60 94-157 159-218 (339)
275 PRK06087 short chain acyl-CoA 25.5 3.7E+02 0.0081 27.8 9.1 80 238-320 48-129 (547)
276 PRK07470 acyl-CoA synthetase; 25.3 7.5E+02 0.016 25.3 12.8 107 56-165 161-270 (528)
277 PRK06018 putative acyl-CoA syn 25.2 4.6E+02 0.01 27.1 9.7 86 238-326 38-125 (542)
278 PRK12582 acyl-CoA synthetase; 25.2 3.3E+02 0.0072 28.9 8.7 80 238-320 79-165 (624)
279 PRK07445 O-succinylbenzoic aci 25.2 6.6E+02 0.014 25.3 10.6 119 56-181 118-239 (452)
280 PF00818 Ice_nucleation: Ice n 24.6 33 0.00072 16.5 0.4 9 414-422 1-9 (16)
281 PRK06178 acyl-CoA synthetase; 24.4 5.3E+02 0.011 26.9 10.0 86 239-327 58-145 (567)
282 PF00156 Pribosyltran: Phospho 24.3 1.8E+02 0.0039 22.9 5.1 51 77-130 4-54 (125)
283 PF09153 DUF1938: Domain of un 24.1 84 0.0018 23.1 2.6 32 77-112 30-62 (86)
284 PRK13390 acyl-CoA synthetase; 24.1 7.6E+02 0.016 25.1 11.0 82 238-322 23-106 (501)
285 PRK07786 long-chain-fatty-acid 23.9 5.4E+02 0.012 26.6 9.9 84 239-325 42-127 (542)
286 PRK06710 long-chain-fatty-acid 23.9 4.2E+02 0.0091 27.6 9.1 84 239-325 49-134 (563)
287 PF04122 CW_binding_2: Putativ 23.7 3.1E+02 0.0068 20.4 8.5 66 84-151 9-74 (92)
288 PLN02550 threonine dehydratase 23.5 9E+02 0.02 25.7 11.7 60 98-160 155-214 (591)
289 PF06277 EutA: Ethanolamine ut 22.5 7.3E+02 0.016 25.3 9.6 68 43-119 353-425 (473)
290 PRK06382 threonine dehydratase 22.5 5.2E+02 0.011 25.8 8.9 52 108-159 78-129 (406)
291 PLN02430 long-chain-fatty-acid 22.3 6.5E+02 0.014 27.0 10.3 85 239-326 76-162 (660)
292 PRK04813 D-alanine--poly(phosp 22.1 3.7E+02 0.008 27.3 8.2 80 239-321 27-108 (503)
293 PTZ00342 acyl-CoA synthetase; 21.8 6.5E+02 0.014 27.7 10.1 90 238-328 90-193 (746)
294 PRK08751 putative long-chain f 21.7 5.8E+02 0.013 26.5 9.7 86 239-326 50-137 (560)
295 PRK05939 hypothetical protein; 21.6 3.9E+02 0.0086 26.6 7.9 11 411-421 337-347 (397)
296 PRK07868 acyl-CoA synthetase; 21.4 8E+02 0.017 28.0 11.1 104 57-165 605-710 (994)
297 PF00464 SHMT: Serine hydroxym 21.3 7.2E+02 0.016 24.8 9.4 62 99-160 107-180 (399)
298 PRK07768 long-chain-fatty-acid 20.7 7.9E+02 0.017 25.4 10.4 97 56-157 150-254 (545)
299 PRK09192 acyl-CoA synthetase; 20.6 7.6E+02 0.016 25.8 10.3 87 237-326 47-142 (579)
300 PRK06060 acyl-CoA synthetase; 20.4 6E+02 0.013 27.5 9.6 83 239-324 30-114 (705)
301 cd00615 Orn_deC_like Ornithine 20.4 4.2E+02 0.0091 24.9 7.5 55 99-156 96-161 (294)
302 TIGR03205 pimA dicarboxylate-- 20.3 5.1E+02 0.011 26.8 8.8 79 239-320 46-126 (541)
303 cd01563 Thr-synth_1 Threonine 20.2 3.6E+02 0.0079 25.8 7.1 57 102-159 70-126 (324)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-71 Score=547.31 Aligned_cols=481 Identities=43% Similarity=0.754 Sum_probs=429.4
Q ss_pred Ccccccccc--cCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCC
Q 010535 23 GPVYRCIYA--KDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (508)
Q Consensus 23 ~~~~~~~~~--~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~ 100 (508)
+++||+... .++.+....+..|+++.|.+.+..+|+.+++-+....+ ..+.|+.+||+|+.+++.+++..|+++|++
T Consensus 53 ~~~~~s~~~~~~~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~ 131 (691)
T KOG1256|consen 53 DGSRRSAVLPREELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVK 131 (691)
T ss_pred CCceeeeeccCCCCCCCCCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCC
Confidence 478888887 45556667899999999999999999999998873322 567889999999999999999999999999
Q ss_pred CCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEc-CCChhhHhhcCcc-CCCCccEEE
Q 010535 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ-ENKIPSILSCLPR-CCLYLKTIV 178 (508)
Q Consensus 101 ~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~-~~~~~~~~i 178 (508)
+++.|+|+..|++||+++.+||...|.++|||...++++.++++++++++.++|+| .+....+.+.... ..+.++.+|
T Consensus 132 ~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI 211 (691)
T KOG1256|consen 132 EDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAII 211 (691)
T ss_pred CCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999 5666677666655 367899999
Q ss_pred EecCCChhhhHHhhhcCceeeeHHHHHhcC-CCCCCC-CCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhh
Q 010535 179 SFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (508)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~ 256 (508)
.++.............++.+++|+++.+.+ .....+ .+..+++.+.|+|||||||.||||++||+|+++.+.......
T Consensus 212 ~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~ 291 (691)
T KOG1256|consen 212 QLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLS 291 (691)
T ss_pred EecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhh
Confidence 999999888888888889999999999988 333333 478899999999999999999999999999999766433322
Q ss_pred hhccc-cCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhh
Q 010535 257 VVTGK-VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (508)
Q Consensus 257 ~~~~~-~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 335 (508)
..... ....+|++++++||.|++..++-...++.|+.+.+.++++..+.+.++..+||.+.++|.+|+++.+.++++..
T Consensus 292 ~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~ 371 (691)
T KOG1256|consen 292 AAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQ 371 (691)
T ss_pred hcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHh
Confidence 21111 23347999999999999999988888899999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHH-hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeee
Q 010535 336 SGGALSKKLFEFAYNYKL-GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 414 (508)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~ 414 (508)
+.+.++++++++|...+. ..+.+|.... ....+|++.++++++.+|+++|.+++|++|+++++...++..+|+.|+++
T Consensus 372 ~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eG 450 (691)
T KOG1256|consen 372 KSGFLKRKLFNFAMAYKLEHRLMKGKSRS-RDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEG 450 (691)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhCCCCcc-cchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeec
Confidence 999999999999999999 4567776554 68899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCC
Q 010535 415 YGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDG 493 (508)
Q Consensus 415 YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~g 493 (508)
||+||+++.++...+++. ..+++|.|+|+++++++|+++-+..+.+ ..|||||+|++||.|||+||+.|.+++ .||
T Consensus 451 YGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDG 527 (691)
T KOG1256|consen 451 YGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDG 527 (691)
T ss_pred ccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccc
Confidence 999999977777666665 5599999999999999999999888776 579999999999999999999999999 999
Q ss_pred ccccCcEEEEcCCCC
Q 010535 494 WFHTGDIGEWQPMEL 508 (508)
Q Consensus 494 w~~TGDlg~~d~~G~ 508 (508)
|++|||+|++|++|+
T Consensus 528 WLhTGDiG~~~p~G~ 542 (691)
T KOG1256|consen 528 WLHTGDIGEWDPNGT 542 (691)
T ss_pred ccccccceeECCCcc
Confidence 999999999999995
No 2
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.4e-69 Score=573.23 Aligned_cols=507 Identities=78% Similarity=1.315 Sum_probs=414.6
Q ss_pred CCCcccccccCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeH
Q 010535 1 MSETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTY 80 (508)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty 80 (508)
|-++||..++++++...++|+++++||+...++.+...+....|+.++|.+.++++|+++|+.+....++..+.++.+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty 80 (660)
T PLN02861 1 MAETYTVKVEESRPATGGKPSAGPVYRSIYAKDGLLDLPADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTY 80 (660)
T ss_pred CCccceeeeccCCCCCCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEH
Confidence 67899999999999988999999999999988888777778889999999999999999999753111333456678999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 010535 81 QEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (508)
Q Consensus 81 ~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 160 (508)
+||.++++++|.+|.++|+++||+|+|+++|+++++++++||+++|++++||++.++.+++.+++++++++++|++....
T Consensus 81 ~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~ 160 (660)
T PLN02861 81 KEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI 160 (660)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred hhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeee
Q 010535 161 PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVL 240 (508)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~ 240 (508)
..+..........++.++.+++............+....+++++...........+..++++++|+|||||||.||||++
T Consensus 161 ~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~l 240 (660)
T PLN02861 161 SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVIL 240 (660)
T ss_pred HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEE
Confidence 55443332222246667766543221111111112334577777654422222334567999999999999999999999
Q ss_pred chHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecc
Q 010535 241 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVP 320 (508)
Q Consensus 241 sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P 320 (508)
||++++..+......+.........+|++++++|++|.++....+.+++.|+++++.++++..+++.++++++|+++++|
T Consensus 241 th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP 320 (660)
T PLN02861 241 TNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVP 320 (660)
T ss_pred ecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeech
Confidence 99999988877655431111124678999999999999998876678999999999888999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHH
Q 010535 321 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 400 (508)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~ 400 (508)
.+|+.+.+.........+.+++.+++++.+.+...+..+.......+..+.++++++++.+|+++|.+++||+++++++.
T Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~ 400 (660)
T PLN02861 321 RVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE 400 (660)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99999999888888888999999999999998887776654444566788899999999999999999999999999986
Q ss_pred HHHHHhcC-CceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccc
Q 010535 401 EFLRVTSG-APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 479 (508)
Q Consensus 401 ~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY 479 (508)
+ |.+.++ ..+++.||+||+++.++..........+++|+|+|+++++|+|.++.+......++.|||+|+||+++.||
T Consensus 401 ~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY 479 (660)
T PLN02861 401 E-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGY 479 (660)
T ss_pred H-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccc
Confidence 5 445555 47999999999987666544433334589999999999999984443322223446899999999999999
Q ss_pred cCCcccccccccCCccccCcEEEEcCCCC
Q 010535 480 YKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 480 ~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+++|+.|.+.|.||||+|||+|++|+||+
T Consensus 480 ~~~pe~T~~~f~dGw~~TGDlg~~d~dG~ 508 (660)
T PLN02861 480 HKRQDLTEEVLIDGWFHTGDIGEWQPNGA 508 (660)
T ss_pred cCCHHHHHhhhhccCcccCceEEECCCCc
Confidence 99999999999999999999999999996
No 3
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.2e-67 Score=558.01 Aligned_cols=496 Identities=55% Similarity=1.012 Sum_probs=395.0
Q ss_pred CCCCCCCCCCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHH
Q 010535 12 ARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFG 91 (508)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A 91 (508)
..-.+++.|.++++||+......++.......|+.++|+++++++|+++|+.+....++..+.++.+||+||.++++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA 93 (666)
T PLN02614 14 GKEGSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLG 93 (666)
T ss_pred cccCCCCCCCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHH
Confidence 33446788999999999887777665456678999999999999999999986411012224456799999999999999
Q ss_pred HHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCC
Q 010535 92 SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC 171 (508)
Q Consensus 92 ~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 171 (508)
++|.++|+++||+|+|+++|+++++++++||+++|+++|||++.++.+++.+++++++++++|++......+........
T Consensus 94 ~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~ 173 (666)
T PLN02614 94 NSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNST 173 (666)
T ss_pred HHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998765554433332222
Q ss_pred CCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHH
Q 010535 172 LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 250 (508)
Q Consensus 172 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~ 250 (508)
..++.++.++.............+....+++++..... .........++++++|+|||||||.||||++||+++...+.
T Consensus 174 ~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~ 253 (666)
T PLN02614 174 EYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIA 253 (666)
T ss_pred ccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHH
Confidence 23566666653221111001111223467888765432 11122234678999999999999999999999999998877
Q ss_pred hhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHH
Q 010535 251 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 330 (508)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 330 (508)
.....+......+..+|++++++|++|.++....+.+++.|+++++.++++..+++.++++++|+++++|++|+.+...+
T Consensus 254 ~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~ 333 (666)
T PLN02614 254 GVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGL 333 (666)
T ss_pred HHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHH
Confidence 65443311112467889999999999999987666778899999998889999999999999999999999999999888
Q ss_pred HHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CC
Q 010535 331 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GA 409 (508)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~ 409 (508)
.......+.+++++++++.+.++..+..+.......+..+.+.++++++.+++++|.+++||+++++++.+ |.+.+ ++
T Consensus 334 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~-~~~~~~~~ 412 (666)
T PLN02614 334 QKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVES-FLRVVACC 412 (666)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHH-HHHHhcCC
Confidence 77788888888999999988877776665444445667788889999999988999999999999988654 54555 58
Q ss_pred ceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccc
Q 010535 410 PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 489 (508)
Q Consensus 410 ~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~ 489 (508)
.+++.||+||+++.++...+......+++|+|+|+++++|+|+++++..+++.|+.|||+|+||+++.|||++|+.|.+.
T Consensus 413 ~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~ 492 (666)
T PLN02614 413 HVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEV 492 (666)
T ss_pred CEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhh
Confidence 99999999999876555444333345899999999999999855543334456689999999999999999999999999
Q ss_pred ccCCccccCcEEEEcCCCC
Q 010535 490 IVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 490 ~~~gw~~TGDlg~~d~~G~ 508 (508)
|.+|||+|||+|++|+||+
T Consensus 493 f~dGw~~TGDlg~~d~dG~ 511 (666)
T PLN02614 493 LIDGWLHTGDVGEWQPNGS 511 (666)
T ss_pred hccCCcccceEEEEcCCCC
Confidence 9999999999999999996
No 4
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.3e-65 Score=538.86 Aligned_cols=493 Identities=49% Similarity=0.900 Sum_probs=401.4
Q ss_pred CCCCCCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHH
Q 010535 16 ADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR 95 (508)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~ 95 (508)
+.++|+++++||+....+.++..+...+|+.++|.+.++++|+++|+.+....++..+.++.+||+|+.++++++|.+|.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~ 94 (660)
T PLN02430 15 KDGKPSVGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALR 94 (660)
T ss_pred CCCCCCCCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHH
Confidence 35788999999998877767655678899999999999999999999764111233345667899999999999999999
Q ss_pred hCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCcc
Q 010535 96 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLK 175 (508)
Q Consensus 96 ~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 175 (508)
+.|+++||+|+|+++|+++++++.+||+++|++++||++.++.+++.++++.++++++|++.................++
T Consensus 95 ~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~ 174 (660)
T PLN02430 95 ASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLK 174 (660)
T ss_pred HcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999987543332222212234566
Q ss_pred EEEEecCCChhhhHHhhhcCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhh
Q 010535 176 TIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 254 (508)
Q Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~ 254 (508)
.++.++.............+....+|+++...+. ......+..++++++|+|||||||.||||++||+++...+.....
T Consensus 175 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~ 254 (660)
T PLN02430 175 AIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDL 254 (660)
T ss_pred EEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHh
Confidence 7777754332111111112334567888876542 222233446789999999999999999999999999988776543
Q ss_pred hhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhh
Q 010535 255 MFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 334 (508)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 334 (508)
........+..+|++++++|++|.++....+.++..|+++++...++..+++.++++++|++.++|.+|+.+.+......
T Consensus 255 ~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~ 334 (660)
T PLN02430 255 FMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKAL 334 (660)
T ss_pred hccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHH
Confidence 22111124568899999999999999887677889999998887788999999999999999999999999999888888
Q ss_pred hcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeee
Q 010535 335 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 414 (508)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~ 414 (508)
...+..++.+|+++...+...+..+.......+..+.+.++++++.+|+++|.+++||+++++++.++++...+..+++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~ 414 (660)
T PLN02430 335 QELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQG 414 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeee
Confidence 88888999999999999988877665444456677888899999999999999999999999999877766545789999
Q ss_pred ccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCc
Q 010535 415 YGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGW 494 (508)
Q Consensus 415 YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw 494 (508)
||+||+++.++..........+++|+|.|+++++++|.++.+..+.+.++.|||+|+|++++.||+++|+.+.+.|.+||
T Consensus 415 YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw 494 (660)
T PLN02430 415 YGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGW 494 (660)
T ss_pred cchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccc
Confidence 99999988777665544444589999999999999985565555555567899999999999999999999999999999
Q ss_pred cccCcEEEEcCCCC
Q 010535 495 FHTGDIGEWQPMEL 508 (508)
Q Consensus 495 ~~TGDlg~~d~~G~ 508 (508)
|+|||+|++|+||+
T Consensus 495 ~~TGDig~~d~dG~ 508 (660)
T PLN02430 495 FHTGDIGEILPNGV 508 (660)
T ss_pred eeccceEEECCCCc
Confidence 99999999999995
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.6e-65 Score=535.39 Aligned_cols=471 Identities=25% Similarity=0.427 Sum_probs=379.2
Q ss_pred CCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC--
Q 010535 20 PSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-- 97 (508)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-- 97 (508)
.+++++||....++. .......|+.++|.++++++|+++|+.+. + .+..|+.+||+||.++++++|.+|.++
T Consensus 40 ~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~p~~~Al~~~---~-~g~~~~~~Ty~el~~~v~~~A~~L~~~~~ 113 (746)
T PTZ00342 40 ENESSVYCMKDHKKK--SSLYVYKHIMKLLLEKYKLNNNKIAIVEH---S-CGEPQNYITYGNFFKKVLSFSHSLNTYEG 113 (746)
T ss_pred CCCCCceecCchhhc--ccccccchHHHHHHHHHhhcCCceeEecc---C-CCCCceeeeHHHHHHHHHHHHHHHHHHhh
Confidence 378889998877766 23366889999999999999999999753 2 223467899999999999999999974
Q ss_pred -CCCCC-----------CEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 98 -GVNPG-----------DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 98 -gv~~g-----------d~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
|+++| |+|+|+++|+++|+++.+||+++|+++||+++.++.+++.++|++++++++|++.+..+.+.+
T Consensus 114 ~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 114 KGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred cCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 99998 999999999999999999999999999999999999999999999999999998776666655
Q ss_pred cCccCCCCccEEEEecCCChhh------------------h---------------------------------------
Q 010535 166 CLPRCCLYLKTIVSFANVSSSQ------------------K--------------------------------------- 188 (508)
Q Consensus 166 ~~~~~~~~~~~~i~~~~~~~~~------------------~--------------------------------------- 188 (508)
... ..+.++.++.++...... .
T Consensus 194 ~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (746)
T PTZ00342 194 RKN-ELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLK 272 (746)
T ss_pred hhc-cCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHH
Confidence 433 345677888776421100 0
Q ss_pred HHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcE
Q 010535 189 KEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDT 268 (508)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (508)
......+.....++++..............++++++|+|||||||.||||++||+|+++.+....... .......++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~---~~~~~~~d~ 349 (746)
T PTZ00342 273 EKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS---IFKKYNPKT 349 (746)
T ss_pred HHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc---cccCCCCCe
Confidence 00000112233455554332222223345679999999999999999999999999999887654321 001235589
Q ss_pred EEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHH
Q 010535 269 YFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (508)
Q Consensus 269 ~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (508)
+++++|++|++++...+.+++.|+++++.+.++..+++.|+++++|+++++|.+|+++.+.+.......+..++++|+++
T Consensus 350 ~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a 429 (746)
T PTZ00342 350 HLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKI 429 (746)
T ss_pred EEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 99999999999998888899999999998779999999999999999999999999999988888888888899999999
Q ss_pred HHHHHhhhccCCCCCCcchhhhHH--HHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceee
Q 010535 349 YNYKLGNMKKGMPQNKAAPLLDSL--VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFT 426 (508)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~ 426 (508)
...+..... +. .....+.+ .++++++.+|+++|.+++||+++++++.++|+..+|+++++.||+||+++.++.
T Consensus 430 ~~~~~~~~~-~~----~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~ 504 (746)
T PTZ00342 430 LSLRKSNNN-GG----FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFV 504 (746)
T ss_pred HHHHHHhhc-CC----cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeee
Confidence 988876433 21 22333333 578899999999999999999999999999999889999999999999877666
Q ss_pred ccCCCccccccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEc
Q 010535 427 SLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQ 504 (508)
Q Consensus 427 ~~~~~~~~~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d 504 (508)
..... ...+++|+|+ |+++++|+|.++..... .++.|||+++||+++.|||++|+.|.++| .||||+|||+|++|
T Consensus 505 ~~~~~-~~~gsvG~p~~pg~e~ki~d~~~~~~~~--~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d 581 (746)
T PTZ00342 505 QHADD-NNTESIGGPISPNTKYKVRTWETYKATD--TLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQIN 581 (746)
T ss_pred ccCCC-CCcccccCcCCCcEEEEEecccccccCC--CCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEEC
Confidence 55443 3458999998 99999999844332222 22579999999999999999999999999 59999999999999
Q ss_pred CCCC
Q 010535 505 PMEL 508 (508)
Q Consensus 505 ~~G~ 508 (508)
+||+
T Consensus 582 ~dG~ 585 (746)
T PTZ00342 582 KNGS 585 (746)
T ss_pred CCCe
Confidence 9995
No 6
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.6e-65 Score=537.60 Aligned_cols=489 Identities=39% Similarity=0.672 Sum_probs=396.9
Q ss_pred ccccccCCCCCCCCCCCCCcccccccccCCCCC---CCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHH
Q 010535 5 YTVKVEEARPAADGKPSGGPVYRCIYAKDGLLE---SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQ 81 (508)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~ 81 (508)
|++++++... ++.+.+||+......+.+ .++...++.++|++.++++|+++|+.+....++..+.++.+||+
T Consensus 8 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~ 82 (651)
T PLN02736 8 YSVVLPEKLQ-----TGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYG 82 (651)
T ss_pred cceeCCCCCC-----CCCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHH
Confidence 5566665544 378899998766655533 24677899999999999999999995431003333456789999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010535 82 EVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (508)
Q Consensus 82 ~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 161 (508)
||.++++++|++|.++|+++||+|+|+++|+++++++++||+++|++++||++.++.+++.++++.++++++|++.+...
T Consensus 83 el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~ 162 (651)
T PLN02736 83 EAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLN 162 (651)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887666
Q ss_pred hHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeee
Q 010535 162 SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVL 240 (508)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~ 240 (508)
.+.+... ..+.++.++..+...................++++..... .........++++++|+|||||||.||||++
T Consensus 163 ~~~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~l 241 (651)
T PLN02736 163 TLLSCLS-EIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVL 241 (651)
T ss_pred HHHHHhh-cCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEE
Confidence 5555433 2345666666643221111111112334567888776542 1222334567999999999999999999999
Q ss_pred chHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecc
Q 010535 241 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVP 320 (508)
Q Consensus 241 sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P 320 (508)
||+++..++......+ ....+|++++.+|++|.+++...+.+++.|+++++.++++..+++.++++++|+++++|
T Consensus 242 sh~~l~~~~~~~~~~~-----~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP 316 (651)
T PLN02736 242 THGNLIANVAGSSLST-----KFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVP 316 (651)
T ss_pred ecHHHHHHHHHHHhcc-----CCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecch
Confidence 9999999988876655 67789999999999999999888889999999999888899999999999999999999
Q ss_pred hHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHH
Q 010535 321 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 400 (508)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~ 400 (508)
.+++.+.+.+.......+.+++.+++++...+...+..+ ....+..+++.+++++..+++++|.+++||+++++++.
T Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~ 393 (651)
T PLN02736 317 RLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENG---KNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVM 393 (651)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcC---CCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHH
Confidence 999999998888888899999999999888776555543 22334567788888888888899999999999999999
Q ss_pred HHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCcc-CCCCCCCceEEEecCcccccc
Q 010535 401 EFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYD-ALSSVPRGEICLRGNTLFSGY 479 (508)
Q Consensus 401 ~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~-~~~~~~~GEl~v~g~~v~~gY 479 (508)
+++++.+|+.+++.||+||+++.++...... ...+++|+|+|+++++|+|.+++... ...+++.|||+|+||+++.||
T Consensus 394 ~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY 472 (651)
T PLN02736 394 EFLRICFGGRVLEGYGMTETSCVISGMDEGD-NLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGY 472 (651)
T ss_pred HHHHHHhCCCeEEEechHHhchheeccCCCC-CCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCcccccc
Confidence 9999888999999999999987766554433 34489999999999999984332211 111235799999999999999
Q ss_pred cCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 480 YKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 480 ~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 473 ~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~ 502 (651)
T PLN02736 473 YKDEVQTREVIDEDGWLHTGDIGLWLPGGR 502 (651)
T ss_pred ccCHHHHHhhhccCCCeeccceEEEcCCCc
Confidence 99999999998 689999999999999995
No 7
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.6e-65 Score=512.46 Aligned_cols=441 Identities=33% Similarity=0.608 Sum_probs=360.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++..++.+.++.+|+.+++... ..+.|+.+||+|+.+++.++|.+|.+.|+..||+|+|++.|+++|+++-
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d 87 (613)
T COG1022 13 AEIHTLPKRLAERVKDRPDGVALMYK-----ELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIAD 87 (613)
T ss_pred hhcccHHHHHHHHhhcCCcceeEeee-----cCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHH
Confidence 34588999999999999998888765 3677899999999999999999999999977999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhh---hHHh-hh-c
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ---KKEA-EE-L 194 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~-~~-~ 194 (508)
+||+.+|++.||+.+..+++++.++|+.++++++|++..........+...++.+...+...+..... .... .. .
T Consensus 88 ~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (613)
T COG1022 88 LAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFP 167 (613)
T ss_pred HHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccc
Confidence 99999999999999999999999999999999999998655544443333222222221111100000 0000 00 0
Q ss_pred CceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhcccc-CCCCcEEEEec
Q 010535 195 GVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV-CSEEDTYFSFL 273 (508)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 273 (508)
......+ ............+..++|++.|+|||||||.||||++||+|+++++..+...+ . .+++|++++++
T Consensus 168 ~~~~~~~--~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~-----~~~~~~d~~LsfL 240 (613)
T COG1022 168 DEGISLF--LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVL-----PPIGPGDRVLSFL 240 (613)
T ss_pred cccchhh--hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhC-----CCCCCCcEEEEeC
Confidence 0011111 11111222223466889999999999999999999999999999999988876 4 78999999999
Q ss_pred ChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 274 PLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 274 pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
|+.|++..++.......++..++...++..+++.+++++||+++++|.+|+.+.+....+..+.+..++++|+|+...+.
T Consensus 241 PlaHi~Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~ 320 (613)
T COG1022 241 PLAHIFERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAY 320 (613)
T ss_pred cHHHHHHHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 99999999874444444444445555999999999999999999999999999999999999999999999999998875
Q ss_pred hhhcc----CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccC
Q 010535 354 GNMKK----GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLA 429 (508)
Q Consensus 354 ~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~ 429 (508)
....+ +.+.. ..-..+++.|+++++.+|.++|++++||+++++++..+++.. |+++.++||+||+++.++.+++
T Consensus 321 ~~~~~~~~~~~~~~-~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGlTEts~~~~v~~~ 398 (613)
T COG1022 321 KKISRALLGGGPLS-WLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGLTETSAVVSVNPP 398 (613)
T ss_pred HHHHhhhcccCCcc-hhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecccccccceEEccc
Confidence 43222 11111 112288999999999999999999999999999999999986 8999999999999999998888
Q ss_pred CCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 430 DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 430 ~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
+.... +++|+|+|+++++|+| .|||+||||+||.|||++|+.|.++| .||||+|||+|.+|++|+
T Consensus 399 ~~~~~-gtvG~p~p~~evKI~d-------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~ 464 (613)
T COG1022 399 DRFVL-GTVGKPLPGIEVKIAD-------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGY 464 (613)
T ss_pred cCccc-CCcCCcCCCceEEEcc-------------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCc
Confidence 77666 9999999999999999 59999999999999999999999999 599999999999999986
No 8
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.8e-63 Score=466.95 Aligned_cols=492 Identities=36% Similarity=0.629 Sum_probs=421.7
Q ss_pred CcccccccCCCCCCCCCCCCCcccccccccCCCCCCC-CCCCCHHHHHHHHHHhCCCCcceeeeecc--------CCC--
Q 010535 3 ETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESP-AGLESPWQFFCDSAKRIPNNQMLGGRKVS--------DGK-- 71 (508)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~l~~~a~~~p~~~a~~~~~~~--------~~~-- 71 (508)
+-+++++.+.. .+.++..||+....+++.+.+ ++..|+++++++..+++.++.++-+++.. |++
T Consensus 5 ~~~~V~~~~~~-----n~~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f 79 (678)
T KOG1180|consen 5 KKYRVKAKPAA-----NEHETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTF 79 (678)
T ss_pred hhcccccCCCC-----CCCCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEE
Confidence 44555555542 235899999999888787777 78999999999999999999999766442 221
Q ss_pred ----CCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCE-EEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHH
Q 010535 72 ----VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR-CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIIN 146 (508)
Q Consensus 72 ----~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~-Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 146 (508)
-+.++.+||.|+.+++.++|.+|.+.|++++++ ++|..+.+.+|.++++||++.+.++|-+...+..+.+.+-|+
T Consensus 80 ~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~ 159 (678)
T KOG1180|consen 80 EKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLN 159 (678)
T ss_pred EEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhc
Confidence 346678999999999999999999999997777 999999999999999999999999999999999999999999
Q ss_pred hcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHh----hhcCceeeeHHHHHhcC-CCCCCCCCCCCCC
Q 010535 147 HAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEA----EELGVSCFSWEEFLQLG-TLDCELPPKKKTN 221 (508)
Q Consensus 147 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (508)
.++++.+|++.+.++.+...++ ....++.+|.++..+....... ...+..+++++++.+.+ ....++.+..++|
T Consensus 160 Et~~~~i~T~~~LL~kl~~~l~-~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~D 238 (678)
T KOG1180|consen 160 ETESTAIFTDSELLPKLKAPLK-QAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSD 238 (678)
T ss_pred cccceEEEeCHHHHHHHHHHHh-ccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCc
Confidence 9999999999998886655544 4578899999986443322222 12457889999999988 3334455568899
Q ss_pred eEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--
Q 010535 222 ISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-- 299 (508)
Q Consensus 222 ~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-- 299 (508)
+|+|+|||||||.||||+++|.|+++.+..+.... ..+.+.|+++.++||.|++-+.+-+.+++.|+.+-..+.
T Consensus 239 ia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v----~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~T 314 (678)
T KOG1180|consen 239 IACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENV----PELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLT 314 (678)
T ss_pred eEEEEEcCCCCCCCceEEEecccHHhhhhhhcccC----cccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcce
Confidence 99999999999999999999999999999876654 267899999999999999999999999999998866543
Q ss_pred ---CH----hhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHH
Q 010535 300 ---DV----RYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSL 372 (508)
Q Consensus 300 ---~~----~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (508)
.. .+--..+...+||++.++|++|+++.+.+..+....+.+++.+|.+++..++..+..- -...+.++.+
T Consensus 315 Ltdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~---g~~s~~ld~l 391 (678)
T KOG1180|consen 315 LTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERN---GPGSPLLDAL 391 (678)
T ss_pred ecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhcc---CCchhhHHHH
Confidence 11 1222335578999999999999999999999999999999999999999888887731 2346889999
Q ss_pred HHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeec
Q 010535 373 VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV 452 (508)
Q Consensus 373 ~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~ 452 (508)
.|.++|..+|.+||++++||++++++..+++.-.+.+++.+.||.||+++..+...+++... +.+|.|++-++++++|.
T Consensus 392 VFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~-g~vG~pl~c~eiKLvdw 470 (678)
T KOG1180|consen 392 VFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFST-GRVGAPLPCCEIKLVDW 470 (678)
T ss_pred HHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhccc-ccccCCccceEEEEEEh
Confidence 99999999999999999999999999999999999999999999999999888887777666 89999999999999999
Q ss_pred CCCCccCCCCCCCceEEEecCcccccccCCcccccccc--cCC--ccccCcEEEEcCCCC
Q 010535 453 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDG--WFHTGDIGEWQPMEL 508 (508)
Q Consensus 453 ~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~--~~g--w~~TGDlg~~d~~G~ 508 (508)
+|++..+...-..|||+++|++|..||++|++.|.+.| .|| ||+|||+|++.+||-
T Consensus 471 ~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~ 530 (678)
T KOG1180|consen 471 EEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGC 530 (678)
T ss_pred hhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCc
Confidence 99998776644689999999999999999999999999 488 999999999999983
No 9
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.5e-61 Score=513.96 Aligned_cols=481 Identities=33% Similarity=0.568 Sum_probs=381.0
Q ss_pred CCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeecc--------CC------CCCCceEeeHHHHHHHH
Q 010535 22 GGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVS--------DG------KVGPYVWLTYQEVYDAA 87 (508)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~--------~~------~~~~~~~~Ty~~l~~~v 87 (508)
.+.+||+......+....++..|+.++|++.++.+||++|+.+.... ++ ..+.|+.+||+||.+++
T Consensus 37 ~~~~~r~~~~~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v 116 (696)
T PLN02387 37 PGYAIRNARFPELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERV 116 (696)
T ss_pred CCCceecCccccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHH
Confidence 33369998855333333367789999999999999999999543100 11 12456789999999999
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcC
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL 167 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (508)
+++|++|.++|+++||+|+|+++|+++++++++||+++|+++|||++.++.+++.++|+.++++++|++.+....+....
T Consensus 117 ~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~ 196 (696)
T PLN02387 117 CNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDIS 196 (696)
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877666655443
Q ss_pred ccCCCCccEEEEecCCChhhhHH-hhhcCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHH
Q 010535 168 PRCCLYLKTIVSFANVSSSQKKE-AEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAI 245 (508)
Q Consensus 168 ~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~ 245 (508)
. ..+.++.++.+++........ ..........|+++...+. .........++++++|+|||||||.||||++||+++
T Consensus 197 ~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l 275 (696)
T PLN02387 197 S-QLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNI 275 (696)
T ss_pred h-ccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHH
Confidence 2 335677788776543211100 0112234567888776542 122233446799999999999999999999999999
Q ss_pred HHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC----C-----HhhHHHHhhhhcCeEE
Q 010535 246 VAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----D-----VRYLMEDIQELKPTMF 316 (508)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~----~-----~~~~~~~i~~~~~t~~ 316 (508)
+.++......+ ..+..+|++++++|++|++++...+.++..|+++.+... + ...++..++++++|++
T Consensus 276 ~~~~~~~~~~~----~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~ 351 (696)
T PLN02387 276 VATVAGVMTVV----PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLM 351 (696)
T ss_pred HHHHHHHHhhc----CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEE
Confidence 99888765432 246788999999999999999877777778887765332 1 2345678999999999
Q ss_pred EecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCC--CCCcchhhhHHHHHHHHHHhCCcEEEEEeecCC
Q 010535 317 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP--QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAP 394 (508)
Q Consensus 317 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~ 394 (508)
.++|.+++++.+.........+.+.+.+++++...++.......+ .......++.+.++++++.+|+++|.+++||++
T Consensus 352 ~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGap 431 (696)
T PLN02387 352 TAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAP 431 (696)
T ss_pred EehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCC
Confidence 999999999998888778888889999999998877665432111 123456788899999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCC-CCCCCceEEEecC
Q 010535 395 LPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDAL-SSVPRGEICLRGN 473 (508)
Q Consensus 395 l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~-~~~~~GEl~v~g~ 473 (508)
+++++.++++..+|+++++.||+||+++.++....+.. ..+++|+|+|+++++|+|.++++.... .+++.|||+|+||
T Consensus 432 l~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~-~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp 510 (696)
T PLN02387 432 LSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDT-SVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGP 510 (696)
T ss_pred CCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccC-CCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccC
Confidence 99999998888889999999999999877766554433 348999999999999999555543321 2335799999999
Q ss_pred cccccccCCccccccccc---CC--ccccCcEEEEcCCCC
Q 010535 474 TLFSGYYKRPDLTEEVIV---DG--WFHTGDIGEWQPMEL 508 (508)
Q Consensus 474 ~v~~gY~~~~~~~~~~~~---~g--w~~TGDlg~~d~~G~ 508 (508)
+++.|||++|+.|.+.|. +| ||+|||+|++|+||+
T Consensus 511 ~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~ 550 (696)
T PLN02387 511 SVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGC 550 (696)
T ss_pred cccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCc
Confidence 999999999999999982 35 999999999999996
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-60 Score=507.67 Aligned_cols=478 Identities=31% Similarity=0.517 Sum_probs=375.1
Q ss_pred CCCCCCcccccccccC----CCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeecc----------CCC--------CCCc
Q 010535 18 GKPSGGPVYRCIYAKD----GLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVS----------DGK--------VGPY 75 (508)
Q Consensus 18 ~~~~~~~~~~~~~~~~----~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~----------~~~--------~~~~ 75 (508)
.++..+++||.....+ .+....+...|+.++|.++++++|+++|+.+.... ++. .+.+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (700)
T PTZ00216 40 ETENASAIYRIAGVTDEEHERLRNEWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNET 119 (700)
T ss_pred CCCCCCCcccCcccccchhcccccccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCc
Confidence 3445778888765443 22222245679999999999999999999875100 111 1246
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 155 (508)
+.+||+||.++++++|.+|.++|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++.+++++++++++|+
T Consensus 120 ~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~ 199 (700)
T PTZ00216 120 RYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVC 199 (700)
T ss_pred eEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCC--C-C-CCCCCCCCCCeEEEEecCCC
Q 010535 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT--L-D-CELPPKKKTNISTIMYTSGT 231 (508)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~~~~~~i~~TSGT 231 (508)
+......+.............++.++..... .........+|+++...+. . . ....+..++++++|+|||||
T Consensus 200 ~~~~~~~l~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGT 275 (700)
T PTZ00216 200 NGKNVPNLLRLMKSGGMPNTTIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGT 275 (700)
T ss_pred CHHHHHHHHHhhhhccCCceEEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCC
Confidence 8765554444332211112245555432211 0112334667888876541 1 1 11233467899999999999
Q ss_pred CCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHH-----
Q 010535 232 TGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLME----- 306 (508)
Q Consensus 232 TG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~----- 306 (508)
||.||||++||+++++.+..+...+.........++++++.+|++|.++.......+..|+.+++. ++..+.+
T Consensus 276 TG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~--~~~~l~~~~~~~ 353 (700)
T PTZ00216 276 TGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG--SPRTLTDTFARP 353 (700)
T ss_pred CCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC--CHHHhhhhhccc
Confidence 999999999999999988776544311111236789999999999999987666677888877652 4555554
Q ss_pred --HhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCc
Q 010535 307 --DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGR 384 (508)
Q Consensus 307 --~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 384 (508)
.++++++|++.++|.+|+.+.+.........+.+++++|+++...++.....+. ..+..+.+.+++++..+|++
T Consensus 354 ~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~g~~ 429 (700)
T PTZ00216 354 HGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK----DTPYWNEKVFSAPRAVLGGR 429 (700)
T ss_pred cchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC----CCchHHHHHHHHHHHHhCCc
Confidence 688999999999999999999988888888889999999999888877665442 24567888899999999999
Q ss_pred EEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCC
Q 010535 385 LQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVP 464 (508)
Q Consensus 385 l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~ 464 (508)
+|.+++||+++++++.++++..++ .+++.||+||+++.++...... ...+++|+|+|+++++|+| +++......+++
T Consensus 430 lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~-~~~~svG~p~~g~evkI~d-~~~~~~~~~~~~ 506 (700)
T PTZ00216 430 VRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVCCGGIQRTGD-LEPNAVGQLLKGVEMKLLD-TEEYKHTDTPEP 506 (700)
T ss_pred EEEEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccccccccCCCC-CCCCCcCCcCCCeEEEEee-chhhccCCCCCC
Confidence 999999999999999998888778 9999999999987666554433 2348999999999999999 554333333446
Q ss_pred CceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 465 RGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 465 ~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
.|||+|+|++++.||+++|+.|.+.| .+|||+|||+|++|+||+
T Consensus 507 ~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~ 551 (700)
T PTZ00216 507 RGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAANGT 551 (700)
T ss_pred CceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcCCCc
Confidence 89999999999999999999999999 689999999999999995
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-59 Score=436.90 Aligned_cols=411 Identities=22% Similarity=0.317 Sum_probs=350.5
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 010535 29 IYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIY 108 (508)
Q Consensus 29 ~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~ 108 (508)
+...++..+.|....|+.+.++..+++-||+.|+++. .++ ..+||+|+.+.++.+|.+|..+|+++||+|.+.
T Consensus 36 ~~~~~g~~~ipl~~~Tigq~l~~~t~~v~dkea~Vf~----~eg---~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvw 108 (596)
T KOG1177|consen 36 HRYVHGCSQIPLDSETIGQLLETTTERVPDKEAAVFD----HEG---IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVW 108 (596)
T ss_pred ccccCCCCCCCcccccHHHHHHHHhhccCcceEEEEe----ecc---chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEe
Confidence 3355777788889999999999999999999999886 222 359999999999999999999999999999999
Q ss_pred cCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh-----hHhhc------------CccCC
Q 010535 109 GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSC------------LPRCC 171 (508)
Q Consensus 109 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~------------~~~~~ 171 (508)
.||+.+|+..++||.++|.+.+++||.+..++++..|+..+++++|+...+.. .+++. ..+.+
T Consensus 109 gpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~l 188 (596)
T KOG1177|consen 109 GPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELL 188 (596)
T ss_pred cCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCcccccccc
Confidence 99999999999999999999999999999999999999999999999875322 12222 12455
Q ss_pred CCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCCCCC------CCCCCCCCCeEEEEecCCCCCCcceeeechHHH
Q 010535 172 LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDC------ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAI 245 (508)
Q Consensus 172 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~ 245 (508)
+.+.++|..++.... .+.+.+++++.....+. ......+++++.|.|||||||.|||+.+||.++
T Consensus 189 p~lthvi~~~ed~~~---------~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~ 259 (596)
T KOG1177|consen 189 PELTHVILADEDHPL---------PGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNF 259 (596)
T ss_pred ccceEEEecCCCCcC---------CCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhh
Confidence 677777777633321 23456777776552211 122346799999999999999999999999999
Q ss_pred HHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchH
Q 010535 246 VAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
+++.......+ ++..++++.+..|++|.+|.. ..++++..|++++++. +++.+.+++|.++++|.++++|++
T Consensus 260 ~Nna~~vg~r~-----g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM 334 (596)
T KOG1177|consen 260 LNNARAVGARA-----GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTM 334 (596)
T ss_pred hhhHHHHHHHh-----CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHH
Confidence 99999998887 777889999999999999976 5889999999999975 499999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHH
Q 010535 323 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 402 (508)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~ 402 (508)
|..+++ .+.....+++ ++|.++.||+++++++++.
T Consensus 335 ~~Dlln-------------------------------------~~~~~~~~~s--------~lr~~vigGa~~s~eLlk~ 369 (596)
T KOG1177|consen 335 FVDLLN-------------------------------------IPQKQQVDLS--------SLRKGVIGGAPVSPELLKL 369 (596)
T ss_pred HHHHhc-------------------------------------chhhccCchh--------hhhhheeCCCCCCHHHHHH
Confidence 999975 3333344454 8899999999999999999
Q ss_pred HHHhcCC-ceeeeccccCCCcceeeccCCC--cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccc
Q 010535 403 LRVTSGA-PLTQGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 479 (508)
Q Consensus 403 ~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~--~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY 479 (508)
+.+..++ .+..+||+||++.+.++...++ .....|+|+.+++.+..|+| .+|...+.+ ..|||++||++++.||
T Consensus 370 iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~--~~Gel~iRGY~tMl~Y 446 (596)
T KOG1177|consen 370 IVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLG--TKGELLIRGYSTMLGY 446 (596)
T ss_pred HHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccC--CCceEEEEechhheee
Confidence 9987766 5888999999998888877665 34457999999999999999 999988887 6799999999999999
Q ss_pred cCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 480 YKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 480 ~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
|++++.+.+.. .|.||+|||+|.+|++|+
T Consensus 447 wg~~~kT~eti~~drW~~TGDi~~m~enG~ 476 (596)
T KOG1177|consen 447 WGEEEKTKETIGNDRWYDTGDIAVMDENGT 476 (596)
T ss_pred cCCcccchhhcccccceecCceEEEcCCCc
Confidence 99999999888 889999999999999995
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-59 Score=468.49 Aligned_cols=393 Identities=28% Similarity=0.402 Sum_probs=319.1
Q ss_pred HHHHHhCCCC-cceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCCcHhHHHHHHHHHhcC
Q 010535 50 CDSAKRIPNN-QMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (508)
Q Consensus 50 ~~~a~~~p~~-~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~g--v~~gd~Vai~~~n~~~~~~~~lA~~~~G 126 (508)
...+..++++ +.+++. +.. .+.+||.|+.+++.++|.+|.++| +++||+|++++||+++++++++||..+|
T Consensus 23 ~~~~~~~~~~~~~~i~~---~~~---g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~G 96 (537)
T KOG1176|consen 23 GRPAFVYLDRNTSLVYQ---DSD---GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAG 96 (537)
T ss_pred cccccccccCcceEEEe---cCC---CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 3334344444 777765 321 158999999999999999999875 8999999999999999999999999999
Q ss_pred CEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee-HHHHH
Q 010535 127 ITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS-WEEFL 205 (508)
Q Consensus 127 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 205 (508)
+++.++||.+.+.++.+.++.++++++|++......+.+...... ..++.+......... ........ +..+.
T Consensus 97 a~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---~~i~~l~~~~~~~~~---~~~~~~~~~~~~~~ 170 (537)
T KOG1176|consen 97 AVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---LKIIVLTGDEGVISI---SDLVEDLDAFEDLM 170 (537)
T ss_pred ccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---CceEEEecccCcccc---ccccccccchhhcc
Confidence 999999999999999999999999999999999988866654322 344444332110000 00001111 44444
Q ss_pred hcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHH
Q 010535 206 QLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIET 285 (508)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~ 285 (508)
....... ..+...++++.++|||||||.||||++||++++.+........ .+...++.++.+|++|.+|+...+
T Consensus 171 ~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-----~~~~~~v~l~~lPl~H~~Gl~~~~ 244 (537)
T KOG1176|consen 171 PEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW-----ELTSDDVYLCTLPLFHIYGLITLL 244 (537)
T ss_pred ccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc-----cCCCCceEEEechHHHHhHHHHHH
Confidence 3332222 4556779999999999999999999999999999987755444 667799999999999999999766
Q ss_pred H-HHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCC
Q 010535 286 H-CIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (508)
Q Consensus 286 ~-~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (508)
. ++..|.++++.+. ++..+++.+++|++|+++++|.++..|++
T Consensus 245 ~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~----------------------------------- 289 (537)
T KOG1176|consen 245 LSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAK----------------------------------- 289 (537)
T ss_pred HHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhc-----------------------------------
Confidence 6 6666666677665 99999999999999999999999999875
Q ss_pred CcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC-CceeeeccccCCCcceeeccCCCccccccccccc
Q 010535 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM 442 (508)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~ 442 (508)
.+...+.+++ +++.+++||+++++++.+++++.++ ..+.++||+||++++++.+......+++++|+++
T Consensus 290 --~p~~~~~~l~--------sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~ 359 (537)
T KOG1176|consen 290 --SPIVKKYDLS--------SLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLL 359 (537)
T ss_pred --CCccCcccCC--------ccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccc
Confidence 2334444554 9999999999999999999999998 8999999999999888877766555669999999
Q ss_pred CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccC-CccccCcEEEEcCCCC
Q 010535 443 TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 443 ~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~-gw~~TGDlg~~d~~G~ 508 (508)
++.+.+|.+ +.|...+. ++.||||++|++++.||++||+.|++.|.+ |||+|||+|++|+|||
T Consensus 360 ~g~~~~v~~-e~g~~l~~--~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~ 423 (537)
T KOG1176|consen 360 PGVRVKVLD-ETGVSLGP--NQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGY 423 (537)
T ss_pred cceEEEeeC-CCCCCCCC--CCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCe
Confidence 999999988 77765554 489999999999999999999999999955 9999999999999996
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.6e-58 Score=472.98 Aligned_cols=399 Identities=28% Similarity=0.421 Sum_probs=326.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.+++.++++.+|+++|+++. +..+ .+||+||.++++++|.+|++.|+++||+|+|+++|++++++++
T Consensus 8 ~~~~~~~~~l~~~a~~~~~~~a~~~~---~~~~----~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~ 80 (534)
T COG0318 8 TAELTLASLLERAARRNPDRPALIFL---GRGG----RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAF 80 (534)
T ss_pred cccccHHHHHHHHHHhCCCceEEEEc---CCCc----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45689999999999999999999987 4321 4999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++||||.+..+++.++++.+++++++++......+....... .....+........... .
T Consensus 81 ~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~ 149 (534)
T COG0318 81 LAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEAL-PVVLVVLLVGDADDRLP----------I 149 (534)
T ss_pred HHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccC-CcceEEEeccccccccc----------c
Confidence 999999999999999999999999999999999999988444433333222 22222322222211000 2
Q ss_pred eHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhcccc--CCCCcEEEEecChH
Q 010535 200 SWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV--CSEEDTYFSFLPLA 276 (508)
Q Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~pl~ 276 (508)
.++++.... .........+++++++++|||||||.||||++||+|+..+.......+ . +..+|++++++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~~~d~~l~~lPl~ 224 (534)
T COG0318 150 TLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-----GGGLTPDDVVLSWLPLF 224 (534)
T ss_pred cHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-----cccCCCCceEEEecChH
Confidence 445553332 111122226789999999999999999999999999999998887777 5 78999999999999
Q ss_pred HHHHHHHHH-HHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHH
Q 010535 277 HIYDQIIET-HCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (508)
Q Consensus 277 ~~~g~~~~~-~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (508)
|.+|+...+ ..++.|+++++.+ +++..++..+.++++|+++++|+++..++....
T Consensus 225 H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~--------------------- 283 (534)
T COG0318 225 HIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPE--------------------- 283 (534)
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCc---------------------
Confidence 999999644 5699999999987 599999999999999999999999999865211
Q ss_pred HhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC-CceeeeccccCCCcceeeccCCC
Q 010535 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADV 431 (508)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~ 431 (508)
....+++ +++|.+++||+++++++.+++++.++ ..+.+.||+||++..++.+....
T Consensus 284 ----------------~~~~~~~-------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 340 (534)
T COG0318 284 ----------------KDDDDLS-------SSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDD 340 (534)
T ss_pred ----------------cCccccc-------cceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCch
Confidence 1111111 13999999999999999999999997 47999999999998888777666
Q ss_pred -cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccC-CccccCcEEEEcCCCC
Q 010535 432 -FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 432 -~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~-gw~~TGDlg~~d~~G~ 508 (508)
....+++|+|+|+++++|+| ++++.... |++|||+|+||+|+.||+++|+.+.+.|.+ |||+|||+|++|+||+
T Consensus 341 ~~~~~~~~G~~~pg~~v~Ivd-~~~~~~~p--g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~ 416 (534)
T COG0318 341 LLAKPGSVGRPLPGVEVRIVD-PDGGEVLP--GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGY 416 (534)
T ss_pred hhhcCCcccccCCCcEEEEEe-CCCCccCC--CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCcc
Confidence 33458889999999999999 77763322 689999999999999999999999998875 9999999999999986
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.3e-57 Score=452.06 Aligned_cols=388 Identities=21% Similarity=0.260 Sum_probs=321.1
Q ss_pred HHHHHHHH-hCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHHHHHHHHh
Q 010535 47 QFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNS 124 (508)
Q Consensus 47 ~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~~~lA~~~ 124 (508)
+.++++.. ..+++.|+++. +..++. +.+||+||.+.++++|+.|++ .|+ +||+|++++|+.+|+++++|||++
T Consensus 13 n~~dr~~~~~~~~~~aii~~---~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~r 87 (528)
T COG0365 13 NALDRHLEADRPDDTAIIFD---GEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATAR 87 (528)
T ss_pred hhhhhhhhccCCCceEEEEE---cCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHH
Confidence 35666665 35789999997 444344 899999999999999999987 578 999999999999999999999999
Q ss_pred cCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccC--CCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 125 QAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC--CLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 125 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+|++.+|+.+.++++.+...+++++++++|+++......+...... ...+..++++.... ..|+
T Consensus 88 iGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~--------------~~~~ 153 (528)
T COG0365 88 IGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG--------------LWYD 153 (528)
T ss_pred cCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc--------------ccHH
Confidence 9999999999999999999999999999999987665432211100 00000133332221 5788
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH
Q 010535 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (508)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 282 (508)
++........+..+.+.+++++++|||||||+||||+++|+.++.......... ..+..+|++++..++.|.+|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~----~~~~~~Dv~w~~ad~GW~~g~~ 229 (528)
T COG0365 154 EAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFH----GDLLPGDRFWNSSDPGWIYGLW 229 (528)
T ss_pred HHhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHh----hCCCCCCEEEeCCCchhhhCch
Confidence 888776556666668999999999999999999999999998777776654432 2666999999999999999999
Q ss_pred H-HHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 283 I-ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 283 ~-~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
. .+.+|..|++++++++ +++.+++.++++++|.++++|+.++.|.+.
T Consensus 230 ~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~---------------------------- 281 (528)
T COG0365 230 YSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKL---------------------------- 281 (528)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhc----------------------------
Confidence 6 8899999999999875 388999999999999999999999998752
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s 437 (508)
.. .++.|++ +||.+.++|||++++..+++.+.+|++|.+.||+||++++.....+ .... ++
T Consensus 282 --------g~-~~~~dls--------sLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~-g~ 342 (528)
T COG0365 282 --------GL-GEPYDLS--------SLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKN-GS 342 (528)
T ss_pred --------CC-cccccch--------hheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCC-CC
Confidence 11 4555665 8999999999999999999999999999999999999966665555 3333 56
Q ss_pred cccccCCeEEEEeecCCCCccCCCCCCCceEEEecC--cccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 438 ~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~--~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
.|+|+||+++.|+| ++|+.++.+ + |+|.++.+ .++++||+|++...+.+-++||.|||.+++|+|||
T Consensus 343 ~g~p~pG~~~~vvd-d~g~~~~~~--~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy 411 (528)
T COG0365 343 SGLPLPGYAVRRVD-DEGNPVPPG--V-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGY 411 (528)
T ss_pred CCCCCCCceeEEEC-CCCCcCCCC--c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCC
Confidence 69999999999999 777766655 6 99999986 99999999999998888666999999999999997
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.1e-55 Score=461.21 Aligned_cols=417 Identities=17% Similarity=0.203 Sum_probs=313.2
Q ss_pred CCCCHHHHHHHHHHh--CCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHH
Q 010535 41 GLESPWQFFCDSAKR--IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~--~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~ 118 (508)
..++..++++++++. +|+++|+++. ...++..+.+||+||.++++++|+.|+++|+++||+|+++++|+++++++
T Consensus 57 ~~n~~~~~l~~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~ 133 (647)
T PTZ00237 57 ELNTCYNVLDIHVKNPLKRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIA 133 (647)
T ss_pred eeeHHHHHHHHhhcccCCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Confidence 446677888888764 7999999885 33223347899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC---------hhhHhhcCccCCCCccEEEEecCCCh-hhh
Q 010535 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSILSCLPRCCLYLKTIVSFANVSS-SQK 188 (508)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 188 (508)
+|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.++..........++.+..... ...
T Consensus 134 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 213 (647)
T PTZ00237 134 MLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSES 213 (647)
T ss_pred HHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccc
Confidence 99999999999999999999999999999999999997531 12222222111111234444321110 000
Q ss_pred HH----hhhcCceeeeHHHHHhcC-----CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHH-HHHHHhhhhhhhh
Q 010535 189 KE----AEELGVSCFSWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAI-VAEVLSVDQMFVV 258 (508)
Q Consensus 189 ~~----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~-~~~~~~~~~~~~~ 258 (508)
.. ..........|++++... ...........+++++|+|||||||.||||+++|.+. ..........+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~-- 291 (647)
T PTZ00237 214 DLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII-- 291 (647)
T ss_pred ccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc--
Confidence 00 000000123566665421 1111233457789999999999999999999999984 43332222222
Q ss_pred ccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCC-------HhhHHHHhhhhcCeEEEecchHHHHHHHHHH
Q 010535 259 TGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGD-------VRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 331 (508)
Q Consensus 259 ~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~-------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 331 (508)
....++++++..|+.|..+...++.+++.|+++++++++ +..+++.++++++|+++++|++++.|++...
T Consensus 292 ---~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 368 (647)
T PTZ00237 292 ---EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDP 368 (647)
T ss_pred ---CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCc
Confidence 556789999999999987666788899999999998642 5789999999999999999999999865210
Q ss_pred HhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCce
Q 010535 332 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 411 (508)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l 411 (508)
.. .......+++ +||.+++||+++++++.+++++.+|+.+
T Consensus 369 ~~--------------------------------~~~~~~~~l~--------~Lr~i~~~G~~l~~~~~~~~~~~~g~~i 408 (647)
T PTZ00237 369 EA--------------------------------TIIRSKYDLS--------NLKEIWCGGEVIEESIPEYIENKLKIKS 408 (647)
T ss_pred cc--------------------------------cccccccCcc--------hheEEEecCccCCHHHHHHHHHhcCCCE
Confidence 00 0001112232 8999999999999999999999999999
Q ss_pred eeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecC---cccccccCCcccccc
Q 010535 412 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEE 488 (508)
Q Consensus 412 ~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~---~v~~gY~~~~~~~~~ 488 (508)
++.||+||+++.++..........+++|+|+|+++++|+| ++|..++. |+.|||++++| +++.|||++++.+.+
T Consensus 409 ~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~--ge~GEl~v~~p~~p~~~~gy~~~~~~~~~ 485 (647)
T PTZ00237 409 SRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKELNV--NEIGEVAFKLPMPPSFATTFYKNDEKFKQ 485 (647)
T ss_pred EeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCCCCC--CCceEEEEeccCCchhhCceeCCHHHHHH
Confidence 9999999998765543332222337999999999999999 78876654 48999999986 789999999998887
Q ss_pred ccc--CCccccCcEEEEcCCCC
Q 010535 489 VIV--DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 489 ~~~--~gw~~TGDlg~~d~~G~ 508 (508)
.|. +|||+|||+|++|+||+
T Consensus 486 ~f~~~~g~~~TGDlg~~d~dG~ 507 (647)
T PTZ00237 486 LFSKFPGYYNSGDLGFKDENGY 507 (647)
T ss_pred HHhCCCCEEECCcEEEECCCCe
Confidence 773 79999999999999995
No 16
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.2e-54 Score=457.77 Aligned_cols=412 Identities=16% Similarity=0.203 Sum_probs=314.8
Q ss_pred CCHHHHHHHHHH-hCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 43 ESPWQFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 43 ~t~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+...++|+++++ .+|+++|+++. ...++..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA 164 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLA 164 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 344677877775 48999999875 33334457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhh---------HhhcCccC---CCCccEEEEecCCChhhhH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS---------ILSCLPRC---CLYLKTIVSFANVSSSQKK 189 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~---~~~~~~~i~~~~~~~~~~~ 189 (508)
|+++|++++|+++.++.+++..+++.++++++|+++..... +....... ......++...........
T Consensus 165 ~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
T PLN02654 165 CARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRE 244 (666)
T ss_pred HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccc
Confidence 99999999999999999999999999999999998764321 11111100 0111222222221100000
Q ss_pred HhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHH-HhhhhhhhhccccCCCCcE
Q 010535 190 EAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV-LSVDQMFVVTGKVCSEEDT 268 (508)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~-~~~~~~~~~~~~~~~~~~~ 268 (508)
...........|+++...............+++++|+|||||||.||||+++|++++... ......+ ++.++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-----~~~~~d~ 319 (666)
T PLN02654 245 DTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-----DYKPTDV 319 (666)
T ss_pred ccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-----CCCCCcE
Confidence 000000012235555433222222334577999999999999999999999999976443 3444444 7788999
Q ss_pred EEEecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHH
Q 010535 269 YFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (508)
Q Consensus 269 ~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (508)
+++..|+.|..|... ++.+|+.|++++++++ ++..+++.|+++++|+++++|++++.|.+...
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~----------- 388 (666)
T PLN02654 320 YWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGD----------- 388 (666)
T ss_pred EEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCc-----------
Confidence 999999999999764 6789999999999863 68999999999999999999999999865210
Q ss_pred HHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC---CceeeeccccC
Q 010535 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTE 419 (508)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~---~~l~~~YG~TE 419 (508)
......+++ +||.++++|+++++++.+++.+.+| +++.+.||+||
T Consensus 389 ------------------------~~~~~~~l~--------~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE 436 (666)
T PLN02654 389 ------------------------EYVTRHSRK--------SLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTE 436 (666)
T ss_pred ------------------------cccccCChh--------heeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccc
Confidence 011222333 8999999999999999999999887 68999999999
Q ss_pred CCcceeeccCCC-cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec--CcccccccCCcccccccc---cCC
Q 010535 420 SCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDG 493 (508)
Q Consensus 420 ~~~~~~~~~~~~-~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~~~~~~---~~g 493 (508)
+++......+.. ...++++|+|+||++++|+| ++|..++. ++.|||+|++ |+++.||+++++.+.+.+ .+|
T Consensus 437 ~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~--~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g 513 (666)
T PLN02654 437 TGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEG--ECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAG 513 (666)
T ss_pred cCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCC--CCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCC
Confidence 987766544332 33458999999999999999 88876643 4789999999 789999999998877665 379
Q ss_pred ccccCcEEEEcCCCC
Q 010535 494 WFHTGDIGEWQPMEL 508 (508)
Q Consensus 494 w~~TGDlg~~d~~G~ 508 (508)
||+|||+|++|+||+
T Consensus 514 ~~~TGD~~~~d~dG~ 528 (666)
T PLN02654 514 YYFSGDGCSRDKDGY 528 (666)
T ss_pred EEEeCceEEECCCCc
Confidence 999999999999996
No 17
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.2e-53 Score=450.77 Aligned_cols=413 Identities=22% Similarity=0.295 Sum_probs=320.3
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
-+.++.++|++.|+++|+++|+++... .+.....+++||+||.++++++|++|+++|+++||+|+++++|++++++++|
T Consensus 23 ~~~t~~~~l~~~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 23 LPASTYELLSRAAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred CCCCHHHHHHHHHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 346899999999999999999987511 1112234789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhHhhcCccCCCCccEEEEecCCChhhh--HHh--
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQK--KEA-- 191 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~-- 191 (508)
||+++| +++||+|.++.+++.++++.++++++|++.... ..+..... ....++.++.++....... ...
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 179 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLA-ALPELRTVVEVDLARYLPGPKRLAVP 179 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHh-cCCcceeEEEecCccccccccccccc
Confidence 999999 579999999999999999999999999986542 22222221 2244555655543211000 000
Q ss_pred ---hhcCceeeeHHHHHhcCCCC--CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCC
Q 010535 192 ---EELGVSCFSWEEFLQLGTLD--CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE 266 (508)
Q Consensus 192 ---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~ 266 (508)
......+..+++.+...... ........+++++++|||||||.||+|.+||+++..........+ ....+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-----~~~~~ 254 (632)
T PRK07529 180 LIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-----GLGPG 254 (632)
T ss_pred ccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-----CCCCC
Confidence 00112344566665544211 112234678999999999999999999999999998887766655 66789
Q ss_pred cEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC----C---HhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCC
Q 010535 267 DTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (508)
Q Consensus 267 ~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~----~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (508)
+++++.+|++|.++... .+.++..|+++++.+. + ...+++.++++++|++.++|+++..+++..
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------- 326 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVP-------- 326 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc--------
Confidence 99999999999999874 7789999999998752 2 368899999999999999999999886410
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeecccc
Q 010535 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLT 418 (508)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~T 418 (508)
.+..++ ++||.+++||+++++++.+++++.+|+++++.||+|
T Consensus 327 ------------------------------~~~~~~--------~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~T 368 (632)
T PRK07529 327 ------------------------------VDGHDI--------SSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLT 368 (632)
T ss_pred ------------------------------ccCCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeeccc
Confidence 000112 389999999999999999999999999999999999
Q ss_pred CCCcceeeccCCCcccccccccccCCeEEEEeec-CCCC-ccCCCCCCCceEEEecCcccccccCCcccccccc-cCCcc
Q 010535 419 ESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV-PEMG-YDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWF 495 (508)
Q Consensus 419 E~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~-~~~~-~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~ 495 (508)
|++.++.....+.....+++|+|+|+++++|+.. +++. ..++..|+.|||+|+|++++.||+++++ +...| .+|||
T Consensus 369 E~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~ 447 (632)
T PRK07529 369 EATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWL 447 (632)
T ss_pred ccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCcc-ccccccCCCce
Confidence 9988776665444445589999999999999642 3441 1334456999999999999999998765 44445 78999
Q ss_pred ccCcEEEEcCCCC
Q 010535 496 HTGDIGEWQPMEL 508 (508)
Q Consensus 496 ~TGDlg~~d~~G~ 508 (508)
+|||+|++|+||+
T Consensus 448 ~TGDlg~~d~dG~ 460 (632)
T PRK07529 448 NTGDLGRIDADGY 460 (632)
T ss_pred EcCcEEEEcCCce
Confidence 9999999999985
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1e-53 Score=446.54 Aligned_cols=399 Identities=21% Similarity=0.193 Sum_probs=311.7
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
..-++.++|++.++++|+++|+++. + +.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~l 75 (563)
T PLN02860 5 SQAHICQCLTRLATLRGNAVVTISG---N------RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLL 75 (563)
T ss_pred hhhHHHHHHHHHHHhcCCceEEecC---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3468999999999999999999754 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++||++.++.+++.++++.+++++++++.................++.++..++....... .......
T Consensus 76 a~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~ 151 (563)
T PLN02860 76 AVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFI----FLNSFLT 151 (563)
T ss_pred HHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccccccc----chhhccc
Confidence 999999999999999999999999999999999998765332222111122333334433322100000 0000111
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.+++.... ..........++++++++|||||||.||+|.++|.++..+.......+ .+..+|+++..+|++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~ 226 (563)
T PLN02860 152 TEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-----GYGEDDVYLHTAPLCHIG 226 (563)
T ss_pred cchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-----CCCCCCEEEEecCchhhc
Confidence 22221111 001111223568999999999999999999999999988777655544 678899999999999999
Q ss_pred HHHHHHHHHhcCcEEEEec-CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 280 DQIIETHCIHKGCSIGFWR-GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
++...+.++..|+++++.+ +++..+++.++++++|++.++|.++..|++......
T Consensus 227 g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~------------------------ 282 (563)
T PLN02860 227 GLSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSM------------------------ 282 (563)
T ss_pred cHHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhh------------------------
Confidence 9888888999999998876 499999999999999999999999999865321100
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC------
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV------ 431 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~------ 431 (508)
...++ +++|.+++||+++++++.+.+++.+ +.++++.||+||+++.++......
T Consensus 283 -----------~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~ 343 (563)
T PLN02860 283 -----------TWKVF--------PSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESP 343 (563)
T ss_pred -----------ccccc--------cceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccc
Confidence 00011 3899999999999999999999988 789999999999986554322111
Q ss_pred ----------------cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCc
Q 010535 432 ----------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGW 494 (508)
Q Consensus 432 ----------------~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw 494 (508)
.....++|+|+|+++++|++ ++ +++.|||+|+|+.++.||+++++.+.+.| .+||
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~-~~-------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~ 415 (563)
T PLN02860 344 KQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGL-DE-------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGW 415 (563)
T ss_pred hhhhhhhcccccccccccCCcccCCccCCcEEEEec-CC-------CCceeEEEEecCcccccccCCccccchhccCCCe
Confidence 11123789999999999998 44 34799999999999999999999998888 6899
Q ss_pred cccCcEEEEcCCCC
Q 010535 495 FHTGDIGEWQPMEL 508 (508)
Q Consensus 495 ~~TGDlg~~d~~G~ 508 (508)
|+|||+|++|+||+
T Consensus 416 ~~TGDl~~~d~dG~ 429 (563)
T PLN02860 416 LDTGDIGWIDKAGN 429 (563)
T ss_pred EEccceEEEcCCCC
Confidence 99999999999985
No 19
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=8.8e-54 Score=443.90 Aligned_cols=392 Identities=21% Similarity=0.223 Sum_probs=307.9
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.+.|.+.++++|+++|+.+. .. +.+||+||.++++++|+.|.+. +||+|+++++|+++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~l 85 (539)
T PRK06334 17 SGKTVLESFLKLCSEMTTATVCWDE---QL-----GKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYF 85 (539)
T ss_pred cCCcHHHHHHHHHHhCCCceEEEeC---CC-----CcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHH
Confidence 3478999999999999999999764 32 3699999999999999999873 89999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++||+|..+.+++.++++.++++++|++.+....+.+...........++.+++.... ..
T Consensus 86 A~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~ 153 (539)
T PRK06334 86 ATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LS 153 (539)
T ss_pred HHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------cc
Confidence 999999999999999999999999999999999998765554433221100011123333221100 00
Q ss_pred HHHHHh------cCC----CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEE
Q 010535 201 WEEFLQ------LGT----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (508)
Q Consensus 201 ~~~~~~------~~~----~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (508)
+.+... ... .........++++++|+|||||||.||+|.++|+++..........+ ....+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l 228 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-----SPKEDDVMM 228 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCCCceEE
Confidence 001000 000 00112235678999999999999999999999999998877765554 677899999
Q ss_pred EecChHHHHHHHH-HHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHH
Q 010535 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (508)
Q Consensus 271 ~~~pl~~~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (508)
+.+|++|.+|+.. .+.++..|+++++.. .++..+++.|+++++|++.++|++++.+++.....
T Consensus 229 ~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------- 294 (539)
T PRK06334 229 SFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQ-------------- 294 (539)
T ss_pred EecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhc--------------
Confidence 9999999999874 678899999998875 38999999999999999999999999987532110
Q ss_pred HHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceee
Q 010535 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFT 426 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~ 426 (508)
..++ ++||.+++||+++++++.+++++.+ +..+++.||+||++.+++.
T Consensus 295 -----------------------~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~ 343 (539)
T PRK06334 295 -----------------------ESCL--------PSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITI 343 (539)
T ss_pred -----------------------cccc--------ccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEe
Confidence 0111 3899999999999999999999988 6899999999999877766
Q ss_pred ccCCCcccccccccccCCeEEEEeecCC-CCccCCCCCCCceEEEecCcccccccCCcccccccc--cCCccccCcEEEE
Q 010535 427 SLADVFNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDGWFHTGDIGEW 503 (508)
Q Consensus 427 ~~~~~~~~~~s~G~p~~~~~~~i~d~~~-~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~--~~gw~~TGDlg~~ 503 (508)
.........+++|+|+++++++|+| ++ +..+ ..|+.|||+|+|++++.||+++++.+.... .+|||+|||+|++
T Consensus 344 ~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~--~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~ 420 (539)
T PRK06334 344 NTVNSPKHESCVGMPIRGMDVLIVS-EETKVPV--SSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYV 420 (539)
T ss_pred ccCCCCCCCCcCceecCCCEEEEEc-CCCCccC--CCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEE
Confidence 5444333346899999999999999 54 4444 455899999999999999999988654322 3679999999999
Q ss_pred cCCCC
Q 010535 504 QPMEL 508 (508)
Q Consensus 504 d~~G~ 508 (508)
|++|+
T Consensus 421 d~~G~ 425 (539)
T PRK06334 421 DRHGE 425 (539)
T ss_pred CCCCe
Confidence 99985
No 20
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.3e-53 Score=447.72 Aligned_cols=395 Identities=19% Similarity=0.337 Sum_probs=307.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.+.|+++++++|+++|+++. + ..+.++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 37 ~~~~l~~~l~~~a~~~p~~~a~~~~---~-~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 112 (614)
T PRK08180 37 YPRRLTDRLVHWAQEAPDRVFLAER---G-ADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLAL 112 (614)
T ss_pred cCccHHHHHHHHHHHCCCCceeeec---c-CCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHH
Confidence 4578999999999999999999865 3 22345789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCC-----HHHHHHHHHhcCceEEEEcCCC-hhhHhhcCccCCCCccEEEEecCCChhhhHHhhhc
Q 010535 121 ACNSQAITYVPLYDTLG-----ANAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 194 (508)
||+++|++++|++|.++ .+++.++++.++++++|+++.. .......... ... .++.......
T Consensus 113 A~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~-~~i~~~~~~~--------- 180 (614)
T PRK08180 113 AAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--ADV-EVVAVRGAVP--------- 180 (614)
T ss_pred HHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CCc-eEEEecCCCC---------
Confidence 99999999999999998 7999999999999999997542 1111111111 111 2222221100
Q ss_pred CceeeeHHHHHhcCCCC---CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccC--CCCcEE
Q 010535 195 GVSCFSWEEFLQLGTLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTY 269 (508)
Q Consensus 195 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 269 (508)
......++++....... .......++++++|+|||||||.||||++||+++..++......+ .. ..++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~~ 255 (614)
T PRK08180 181 GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF-----PFLAEEPPVL 255 (614)
T ss_pred CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc-----cccCCCCcEE
Confidence 00123455555432111 111234578999999999999999999999999998887766554 32 256899
Q ss_pred EEecChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHH
Q 010535 270 FSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKK 343 (508)
Q Consensus 270 l~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 343 (508)
++.+|++|.+|+. ..+.+++.|+++++.+. ....+++.++++++|+++++|.+++.|++.+...
T Consensus 256 l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~---------- 325 (614)
T PRK08180 256 VDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERD---------- 325 (614)
T ss_pred EEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhc----------
Confidence 9999999999986 46678999999998752 3357888999999999999999999987643211
Q ss_pred HHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHh----cC--Cceeeeccc
Q 010535 344 LFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----SG--APLTQGYGL 417 (508)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~----~~--~~l~~~YG~ 417 (508)
+.....++ ++||.+++||+++++++.+++.+. +| +.+++.||+
T Consensus 326 -----------------------~~~~~~~~--------~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~ 374 (614)
T PRK08180 326 -----------------------AALRRRFF--------SRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGM 374 (614)
T ss_pred -----------------------hhhhhhhc--------cceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecc
Confidence 11111112 389999999999999999999874 33 689999999
Q ss_pred cCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccc
Q 010535 418 TESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFH 496 (508)
Q Consensus 418 TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~ 496 (508)
||++.+++...... ..++++|+|+||++++|+| + +..|||+|+|++++.||+++|+.+.+.| .+|||+
T Consensus 375 TE~~~~~~~~~~~~-~~~~svG~p~pg~~v~i~d-~---------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~ 443 (614)
T PRK08180 375 TETAPSATFTTGPL-SRAGNIGLPAPGCEVKLVP-V---------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYR 443 (614)
T ss_pred cccCCceEeccccc-CCCCcccCccCCcEEEEec-C---------CCCcEEEEecCccchhhcCChhHhHhhcccCCcee
Confidence 99987766544333 3448999999999999998 3 2469999999999999999999999988 589999
Q ss_pred cCcEEEE----cCCCC
Q 010535 497 TGDIGEW----QPMEL 508 (508)
Q Consensus 497 TGDlg~~----d~~G~ 508 (508)
|||+|++ |+||+
T Consensus 444 TGDlg~~~~~~d~~g~ 459 (614)
T PRK08180 444 SGDAVRFVDPADPERG 459 (614)
T ss_pred ccceEEecCCcCCCCc
Confidence 9999999 45664
No 21
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.2e-53 Score=451.64 Aligned_cols=409 Identities=19% Similarity=0.263 Sum_probs=321.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.+...++|+++++.+|+++|+++. +...+..+.+||+||.++++++|++|+++|+++||+|+++++|+++++++++|
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 132 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLA 132 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 356677888888899999999986 43234557899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhHhhcCccCCC-CccEEEEecCCChhhhHHh
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCL-YLKTIVSFANVSSSQKKEA 191 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~ 191 (508)
|+++|++++|+++.++.+++.++++.++++++|+++... ..+.+... ..+ .++.++.+....... ..
T Consensus 133 ~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~- 209 (625)
T TIGR02188 133 CARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALE-KCPVSVEHVLVVRRTGNPV-PW- 209 (625)
T ss_pred HHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHH-hCCCCccEEEEEcCCCCCc-Cc-
Confidence 999999999999999999999999999999999987532 11211111 112 345555554322100 00
Q ss_pred hhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhh-hhhhhhccccCCCCcEEE
Q 010535 192 EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV-DQMFVVTGKVCSEEDTYF 270 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 270 (508)
.......++++.........+.....+++++|+|||||||.||||+++|++++...... ...+ .+..+|+++
T Consensus 210 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~ 282 (625)
T TIGR02188 210 --VEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF-----DIKDGDIFW 282 (625)
T ss_pred --cccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc-----CCCCCcEEE
Confidence 00112346666554432333445677899999999999999999999999987654432 2222 677899999
Q ss_pred EecChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 271 SFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 271 ~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
+..|++|..+.. .++.++..|+++++.++ ++..+++.++++++|+++++|++++.|.+...
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~------------- 349 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGD------------- 349 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCC-------------
Confidence 999999998876 47789999999999753 78999999999999999999999998865210
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC---CceeeeccccCCC
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESC 421 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~---~~l~~~YG~TE~~ 421 (508)
...+..++ ++||.+++||+++++++.+++.+.++ +++++.||+||++
T Consensus 350 ----------------------~~~~~~~l--------~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~ 399 (625)
T TIGR02188 350 ----------------------EWVKKHDL--------SSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETG 399 (625)
T ss_pred ----------------------cccccCCc--------cceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccC
Confidence 00111222 38999999999999999999998875 7899999999998
Q ss_pred cceeeccCC-CcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec--CcccccccCCcccccccc---cCCcc
Q 010535 422 SGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGWF 495 (508)
Q Consensus 422 ~~~~~~~~~-~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~~~~~~---~~gw~ 495 (508)
+.++..... ....++++|+|++|++++|+| ++|..++ +.|+.|||+|+| |+++.||+++++.+.+.+ .+|||
T Consensus 400 ~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~-~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~ 477 (625)
T TIGR02188 400 GIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVE-GPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYY 477 (625)
T ss_pred CceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCC-CCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEE
Confidence 876654433 223458999999999999999 8887665 245899999999 689999999998776665 47899
Q ss_pred ccCcEEEEcCCCC
Q 010535 496 HTGDIGEWQPMEL 508 (508)
Q Consensus 496 ~TGDlg~~d~~G~ 508 (508)
+|||+|++|+||+
T Consensus 478 ~TGDl~~~d~dG~ 490 (625)
T TIGR02188 478 FTGDGARRDKDGY 490 (625)
T ss_pred ECCceEEEcCCCc
Confidence 9999999999995
No 22
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-53 Score=444.06 Aligned_cols=393 Identities=19% Similarity=0.205 Sum_probs=319.7
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.++.++|++.++++|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~ 119 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAA 119 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999865 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+++|++++|+++.++.+++.++++.++++++|++......+.+.. .....+..++....... .....+..++
T Consensus 120 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 191 (549)
T PRK07788 120 GKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALP-PDLGRLRAWGGNPDDDE-------PSGSTDETLD 191 (549)
T ss_pred HhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhc-cccccceEEEEecCccc-------cCCcCcccHH
Confidence 999999999999999999999999999999999987666553322 11222333222211110 0112345677
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH
Q 010535 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (508)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 282 (508)
++...... ...+...++.++++|||||||.||+|.++|.++...+......+ .+..++++++..|++|.+|+.
T Consensus 192 ~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~ 264 (549)
T PRK07788 192 DLIAGSST--APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-----PFRAGETTLLPAPMFHATGWA 264 (549)
T ss_pred HHhcCCCC--CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-----CCCcCCeEEEccchHHHHHHH
Confidence 77654321 12223456789999999999999999999999998877766555 677889999999999999998
Q ss_pred HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCC
Q 010535 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (508)
Q Consensus 283 ~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (508)
..+.++..|+++++... ++..+++.++++++|++.++|++++.+++......
T Consensus 265 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~--------------------------- 317 (549)
T PRK07788 265 HLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVL--------------------------- 317 (549)
T ss_pred HHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCccccc---------------------------
Confidence 77889999999988764 99999999999999999999999999865221100
Q ss_pred CCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccc
Q 010535 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (508)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p 441 (508)
...++ ++||.+++||+++++++.+++.+.++..+++.||+||++..+.....+....++++|+|
T Consensus 318 --------~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~ 381 (549)
T PRK07788 318 --------AKYDT--------SSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRP 381 (549)
T ss_pred --------CCCCC--------CceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccC
Confidence 00111 38999999999999999999999999999999999999866554433323344789999
Q ss_pred cCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 442 ~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+++++++|+| +++..++. |+.|||+|+|+.++.||+++++. ...+|||+|||+|++|+||+
T Consensus 382 ~~~~~~~i~d-~~~~~~~~--g~~Gel~v~g~~~~~gY~~~~~~---~~~~g~~~TGDl~~~~~~g~ 442 (549)
T PRK07788 382 PKGVTVKILD-ENGNEVPR--GVVGRIFVGNGFPFEGYTDGRDK---QIIDGLLSSGDVGYFDEDGL 442 (549)
T ss_pred CCCcEEEEEC-CCcCCCCC--CCeEEEEEeCCCccccccCCCcc---cccCCceecCceEEEcCCCC
Confidence 9999999999 88876665 58999999999999999998765 23589999999999999985
No 23
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-53 Score=444.96 Aligned_cols=392 Identities=20% Similarity=0.341 Sum_probs=303.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|+++++++|+++|+++. +...+.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 122 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMT 122 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 45788999999999999999999875 432345689999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCH-----HHHHHHHHhcCceEEEEcCCC-hhhHhhcCccCCCCccEEEEecCCChhhhHHhhh
Q 010535 120 EACNSQAITYVPLYDTLGA-----NAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE 193 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 193 (508)
+||+++|++++|++|.++. +++.++++.++++++|+++.. .......... ...+ ++.++....
T Consensus 123 lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~-~i~~~~~~~-------- 191 (624)
T PRK12582 123 LAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL--LDVT-VVHVTGPGE-------- 191 (624)
T ss_pred HHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh--cCce-EEEEcCCCc--------
Confidence 9999999999999999885 899999999999999998642 1212222211 1122 233322110
Q ss_pred cCceeeeHHHHHhcCCCC---CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCC---CCc
Q 010535 194 LGVSCFSWEEFLQLGTLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS---EED 267 (508)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~---~~~ 267 (508)
......++++....... .......++++++|+|||||||.||||.++|+++...+......+ ... ..+
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~ 265 (624)
T PRK12582 192 -GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-----PREPDPPPP 265 (624)
T ss_pred -ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-----cccCCCCCc
Confidence 01123455554332111 111234568999999999999999999999999998877654433 222 357
Q ss_pred EEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--C---HhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhH
Q 010535 268 TYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (508)
Q Consensus 268 ~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~--~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (508)
++++.+|++|.+|+.. ++.++..|+++++.+. . ...+++.++++++|+++++|.+++.|++.+..
T Consensus 266 ~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~--------- 336 (624)
T PRK12582 266 VSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEK--------- 336 (624)
T ss_pred eEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhh---------
Confidence 9999999999999875 5678899999998753 2 34567788899999999999999988653321
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc------CCceeeec
Q 010535 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS------GAPLTQGY 415 (508)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~------~~~l~~~Y 415 (508)
.+.....++ ++||.+++||+++++++.+++.+.+ ++.+++.|
T Consensus 337 ------------------------~~~~~~~~~--------~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~Y 384 (624)
T PRK12582 337 ------------------------DDALRRSFF--------KNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGY 384 (624)
T ss_pred ------------------------CHHHHHHHh--------hheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEecc
Confidence 111122223 3899999999999999999998852 36899999
Q ss_pred cccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCc
Q 010535 416 GLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGW 494 (508)
Q Consensus 416 G~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw 494 (508)
|+||++.++....... ...+++|+|+||++++|++ .|+.|||+|+|++++.||+++|+.+.+.| .+||
T Consensus 385 G~TE~~~~~~~~~~~~-~~~~svG~p~pg~~v~i~~----------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw 453 (624)
T PRK12582 385 GATETAPTTTGTHWDT-ERVGLIGLPLPGVELKLAP----------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGF 453 (624)
T ss_pred ccccccceeecccCCC-CCCCCCCcCCCCcEEEEcc----------CCCceEEEEECCcccccccCCccchhhhcCccCC
Confidence 9999987665333222 3348999999999999975 34789999999999999999999999999 6899
Q ss_pred cccCcEEEE
Q 010535 495 FHTGDIGEW 503 (508)
Q Consensus 495 ~~TGDlg~~ 503 (508)
|+|||+|++
T Consensus 454 ~~TGDlg~~ 462 (624)
T PRK12582 454 YRLGDAARF 462 (624)
T ss_pred ccccceEEe
Confidence 999999998
No 24
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.4e-53 Score=445.83 Aligned_cols=406 Identities=19% Similarity=0.257 Sum_probs=317.7
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~ 123 (508)
...++|+++++++|+++|+++. +..++..+.+||+||.++++++|++|++.|+++||+|+++++|+++++++++||+
T Consensus 68 ~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 144 (637)
T PRK00174 68 VSYNCLDRHLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACA 144 (637)
T ss_pred HHHHHHHHhhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3467788888999999999986 4333345789999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh---------hHhhcCccCCCCccEEEEecCCChhhhHHhhhc
Q 010535 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (508)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 194 (508)
++|++++|++|.++.+++.++++.++++++|+++.... .+..... ....++.++.+........ ..
T Consensus 145 ~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~ 219 (637)
T PRK00174 145 RIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALA-NCPSVEKVIVVRRTGGDVD----WV 219 (637)
T ss_pred HcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHH-hCCCccEEEEEcCCCCCcC----cC
Confidence 99999999999999999999999999999999875421 1111111 1234455555543211000 00
Q ss_pred CceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhh-hhhhhhccccCCCCcEEEEec
Q 010535 195 GVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV-DQMFVVTGKVCSEEDTYFSFL 273 (508)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 273 (508)
......++++...............+++++|+|||||||.||||+++|++++.+.... ...+ .+..+|++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~ 294 (637)
T PRK00174 220 EGRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF-----DYKDGDVYWCTA 294 (637)
T ss_pred CCCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-----CCCCCcEEEEcC
Confidence 1123346666544322233344567899999999999999999999999987654432 2222 667889999999
Q ss_pred ChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHH
Q 010535 274 PLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (508)
Q Consensus 274 pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (508)
|++|..+.. .++.+|+.|+++++.++ ++..+++.++++++|++.++|++++.|++....
T Consensus 295 ~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~--------------- 359 (637)
T PRK00174 295 DVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDE--------------- 359 (637)
T ss_pred CchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCc---------------
Confidence 999999876 47789999999998753 689999999999999999999999988652100
Q ss_pred HHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC---CceeeeccccCCCcce
Q 010535 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESCSGC 424 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~---~~l~~~YG~TE~~~~~ 424 (508)
.....++ ++||.+++||+++++++.+++.+.++ +++++.||+||+++.+
T Consensus 360 --------------------~~~~~~~--------~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~ 411 (637)
T PRK00174 360 --------------------HPKKYDL--------SSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIM 411 (637)
T ss_pred --------------------ccccCCc--------cceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCce
Confidence 0011122 38999999999999999999998875 7899999999998876
Q ss_pred eeccCCC-cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec--CcccccccCCcccccccc---cCCccccC
Q 010535 425 FTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGWFHTG 498 (508)
Q Consensus 425 ~~~~~~~-~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~~~~~~---~~gw~~TG 498 (508)
.....+. ...++++|+|++|++++|+| ++|..++. |+.|||+|+| |+++.||+++++.+.+.+ .+|||+||
T Consensus 412 ~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~--g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TG 488 (637)
T PRK00174 412 ITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEG--GEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTG 488 (637)
T ss_pred EecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCC--CCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECC
Confidence 6543322 23347899999999999999 88876654 4899999999 689999999998776655 47899999
Q ss_pred cEEEEcCCCC
Q 010535 499 DIGEWQPMEL 508 (508)
Q Consensus 499 Dlg~~d~~G~ 508 (508)
|+|++|+||+
T Consensus 489 Dl~~~d~dG~ 498 (637)
T PRK00174 489 DGARRDEDGY 498 (637)
T ss_pred ceEEEcCCCc
Confidence 9999999995
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.5e-53 Score=441.91 Aligned_cols=400 Identities=16% Similarity=0.227 Sum_probs=325.4
Q ss_pred CCCHHHHHHHHHH-hCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
.+.+.+++++++. .+|+++|+.+. +.. ..+.+||+||.++++++|.+|.++|+++||+|+++++|+++++++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 116 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALL 116 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 4566678888887 57999999876 432 33689999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|+++.++.+++.++++.++++++|++......... ...+..+.++.++.... ......+
T Consensus 117 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~~ 185 (570)
T PRK04319 117 GALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA---DDLPSLKHVLLVGEDVE--------EGPGTLD 185 (570)
T ss_pred HHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch---hcCCCceEEEEECCCcC--------CCcCccC
Confidence 999999999999999999999999999999999998765443221 12234445555543221 0112345
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
++++..............++++++++|||||||.||+|.++|++++..+......+ .+..+|++++..|++|..|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g 260 (570)
T PRK04319 186 FNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-----DLHEDDVYWCTADPGWVTG 260 (570)
T ss_pred HHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-----CCCCCceEEecCChHHhhC
Confidence 66655443222233345678899999999999999999999999998877766555 6778999999999999998
Q ss_pred HH-HHHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 281 QI-IETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 281 ~~-~~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
.. .++.++..|+++++.. +++..+++.++++++|+++++|.+++.+++...
T Consensus 261 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-------------------------- 314 (570)
T PRK04319 261 TSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGD-------------------------- 314 (570)
T ss_pred chHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCC--------------------------
Confidence 76 4778999999999875 489999999999999999999999998864210
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s 437 (508)
......++ +++|.+++||+++++++.+++++.+|.++++.||+||+++.+..........+++
T Consensus 315 ---------~~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~ 377 (570)
T PRK04319 315 ---------DLVKKYDL--------SSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGS 377 (570)
T ss_pred ---------cccccCCc--------ccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCc
Confidence 00111112 2899999999999999999999999999999999999987766544433344589
Q ss_pred cccccCCeEEEEeecCCCCccCCCCCCCceEEEec--CcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 438 ~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+|+|+|+++++|+| +++..++ .|+.|||+++| +.++.||+++++.+.+.|.+|||+|||+|++|++|+
T Consensus 378 ~G~p~~g~~~~i~d-~~~~~~~--~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~ 447 (570)
T PRK04319 378 MGKPLPGIEAAIVD-DQGNELP--PNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGY 447 (570)
T ss_pred CcCCCCCCEEEEEC-CCCCCCC--CCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCee
Confidence 99999999999999 7777664 45899999997 899999999999999999999999999999999984
No 26
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.5e-53 Score=429.84 Aligned_cols=389 Identities=28% Similarity=0.463 Sum_probs=300.6
Q ss_pred HHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCE
Q 010535 49 FCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (508)
Q Consensus 49 l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~ 128 (508)
|+++|+++||++|+++. +. +.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDD---EG-----RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEET---TT-----EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEEC---CC-----EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 67899999999999871 12 78999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHHHhcCceEEEE----cCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHH
Q 010535 129 YVPLYDTLGANAVEFIINHAEVSIAFV----QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEF 204 (508)
Q Consensus 129 ~v~l~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (508)
++||+|.++.+++.++++.++++++|+ +......+...... ......++.++......... ......
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 143 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQ-EDPSSSIIILDRDDLPKKEA--------LKSASL 143 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTT-STTTEEEEEESHSSCTTCHH--------HHHHHH
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhcc-cccccccccccccccccccc--------cccccc
Confidence 999999999999999999999999998 22111222222211 12334455554332111000 000000
Q ss_pred HhcCCCCCCCCC-CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH-H
Q 010535 205 LQLGTLDCELPP-KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ-I 282 (508)
Q Consensus 205 ~~~~~~~~~~~~-~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~ 282 (508)
... .. .. ..++++++++|||||||.||+|.++|++++..+..+. +... .... |++++.+|++|.+|+ .
T Consensus 144 ~~~--~~---~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~-~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 144 SDE--PQ---SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEY-FGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp CHC--SH---STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHT-TTTT--TEEEESS-TTSHHHHHH
T ss_pred ccc--cc---cCCCCccceeEeeccccccccccccccccccccccccccc--cccc-cccC--ceEEeeccccccccccc
Confidence 000 00 00 0468999999999999999999999999999988865 1110 1222 599999999999999 5
Q ss_pred HHHHHHhcCcEEEEecC-C---HhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 283 IETHCIHKGCSIGFWRG-D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 283 ~~~~~l~~G~~~v~~~~-~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
..+.+++.|+++++++. . ++.+++.++++++|+++++|.+++.+++ .......
T Consensus 214 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~-~~~~~~~---------------------- 270 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQ-SPEEKTK---------------------- 270 (417)
T ss_dssp HHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHH-HHHTTHH----------------------
T ss_pred cccccccccccccccccccccccccchhcccccccccccccccccccccc-ccccccc----------------------
Confidence 78899999999999986 2 4778999999999999999999999876 2111000
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC-ceeeeccccCCCcceeecc-CCCccccc
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSL-ADVFNMIG 436 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~-~~~~~~~~ 436 (508)
....++ +++|.+++||+++++++.+++++.++. .+++.||+||++.+++... .......+
T Consensus 271 ----------~~~~~l--------~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~ 332 (417)
T PF00501_consen 271 ----------ISKKDL--------SSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPG 332 (417)
T ss_dssp ----------GTTTTG--------TT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTT
T ss_pred ----------cccccc--------ccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccc
Confidence 000012 269999999999999999999999987 9999999999999887663 23333448
Q ss_pred ccccccCCeEEEEeecCC-CCccCCCCCCCceEEEecCcccccccCCcccccccccC-CccccCcEEEEcCCCC
Q 010535 437 TVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 437 s~G~p~~~~~~~i~d~~~-~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~-gw~~TGDlg~~d~~G~ 508 (508)
++|+|+|+++++|+| ++ +..++ .|+.|||+|+|+.++.||+++++.+.+.|.+ |||+|||+|++|+||+
T Consensus 333 ~~G~~~~~~~~~ivd-~~~~~~~~--~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~ 403 (417)
T PF00501_consen 333 SVGKPLPGVEVKIVD-PNTGEPLP--PGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGY 403 (417)
T ss_dssp SEBEESTTEEEEEEC-TTTSSBES--TTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSE
T ss_pred ccccccccccccccc-cccccccc--ccccccccccCCccceeeeccccccccccccccceecceEEEECCCCe
Confidence 899999999999999 55 66665 4489999999999999999999999999965 8999999999999984
No 27
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=3.3e-52 Score=434.14 Aligned_cols=396 Identities=22% Similarity=0.277 Sum_probs=320.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+.++.+.|++.++.+|+++|+++. +...+.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 368999999999999999999876 43344567899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
|+++|++++|++|.++.+++.++++.++++++|+++... ..+.+ .......++.++.++...
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------ 166 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARR-LRPELPALRHVVVVGGDG------------ 166 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHH-HhhhCCCcceEEEecCCC------------
Confidence 999999999999999999999999999999999987541 11111 111223444555543221
Q ss_pred eeeeHHHHHhcC--------CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcE
Q 010535 197 SCFSWEEFLQLG--------TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDT 268 (508)
Q Consensus 197 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (508)
..++.++.... ...........+++++++|||||||.||+|.++|.++...+......+ .+..+++
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~ 240 (547)
T PRK13295 167 -ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-----GLGADDV 240 (547)
T ss_pred -ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-----CCCCCCe
Confidence 11233332211 001112234568999999999999999999999999998888876665 6788999
Q ss_pred EEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHH
Q 010535 269 YFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (508)
Q Consensus 269 ~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (508)
+++.+|++|..++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|+++..+......
T Consensus 241 ~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~-------------- 306 (547)
T PRK13295 241 ILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKE-------------- 306 (547)
T ss_pred EEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc--------------
Confidence 999999999999875 7789999999998875 899999999999999999999999988642110
Q ss_pred HHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceee
Q 010535 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFT 426 (508)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~ 426 (508)
...++ +++|.+++||+++++++.+++.+.++.++++.||+||++.+++.
T Consensus 307 -----------------------~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~ 355 (547)
T PRK13295 307 -----------------------SGRPV--------SSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLT 355 (547)
T ss_pred -----------------------cCCCc--------ccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeec
Confidence 00111 37999999999999999999999889999999999999876554
Q ss_pred ccCCC-cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcC
Q 010535 427 SLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQP 505 (508)
Q Consensus 427 ~~~~~-~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~ 505 (508)
..... .....++|+|+++++++|+| +++..++. |+.|||+|+|+.++.||+++++.+... .+|||+|||+|++|+
T Consensus 356 ~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~--g~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~ 431 (547)
T PRK13295 356 KLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPA--GQIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDA 431 (547)
T ss_pred cCCCcchhccCccccccCCcEEEEEC-CCCCCCCC--CCCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcC
Confidence 43322 22336889999999999999 77766554 489999999999999999999888766 688999999999999
Q ss_pred CCC
Q 010535 506 MEL 508 (508)
Q Consensus 506 ~G~ 508 (508)
+|+
T Consensus 432 ~g~ 434 (547)
T PRK13295 432 DGY 434 (547)
T ss_pred Cce
Confidence 984
No 28
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=9.9e-53 Score=443.99 Aligned_cols=410 Identities=16% Similarity=0.158 Sum_probs=313.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.+...++|+++++.+|+++|+++. +..++..+.+||+||.++++++|++|+++|+++||+|+++++|+++++++++|
T Consensus 51 ~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA 127 (628)
T TIGR02316 51 TNLCHNALDRHLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLA 127 (628)
T ss_pred eeHHHHHHHHHhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 345567888888899999999985 43334457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhHhhcCccCCCCccEEEEecCCChhhhHHhh
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAE 192 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 192 (508)
|+++|++++|+++.++.+++..+++.++++++|+++... ..+.++..........++.++...... .
T Consensus 128 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~ 203 (628)
T TIGR02316 128 CARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM----R 203 (628)
T ss_pred HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----C
Confidence 999999999999999999999999999999999976432 111111111112344555554321100 0
Q ss_pred hcCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHH-HhhhhhhhhccccCCCCcEEE
Q 010535 193 ELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV-LSVDQMFVVTGKVCSEEDTYF 270 (508)
Q Consensus 193 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 270 (508)
........++++..... ...+.....++++++|+|||||||.||||+++|.++..+. ......+ .+..+|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~ 278 (628)
T TIGR02316 204 LIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-----GIRAGQVMF 278 (628)
T ss_pred cccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCcEEE
Confidence 00011235566554321 1122223467899999999999999999999999976443 3333333 678899999
Q ss_pred EecChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 271 SFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 271 ~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
+..|++|..++. .++.+|+.|+++++.++ ++..+++.++++++|+++++|++++.|.+..
T Consensus 279 ~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------------- 344 (628)
T TIGR02316 279 SASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQD-------------- 344 (628)
T ss_pred EcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcC--------------
Confidence 999999999875 57789999999999863 6889999999999999999999998875410
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcce
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC 424 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~ 424 (508)
.......++ ++||.+++||+++++++.+++++.++..+++.||+||++..+
T Consensus 345 ---------------------~~~~~~~~l--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~ 395 (628)
T TIGR02316 345 ---------------------AAWLRKHDL--------SSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPV 395 (628)
T ss_pred ---------------------CcccccCCc--------cceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCcee
Confidence 000111122 389999999999999999999998999999999999998655
Q ss_pred eeccCCC---cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecC---cccccccCCcccccccc----cCCc
Q 010535 425 FTSLADV---FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVI----VDGW 494 (508)
Q Consensus 425 ~~~~~~~---~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~---~v~~gY~~~~~~~~~~~----~~gw 494 (508)
+...... ....+++|+|+||++++|+|.++|..++ .|+.|||+++|| +++.||+++++.+.+.+ .++|
T Consensus 396 ~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~--~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 473 (628)
T TIGR02316 396 LAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCG--PNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPL 473 (628)
T ss_pred ecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCC--CCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCE
Confidence 4332221 2234889999999999999932566554 458999999998 57789999987765543 5779
Q ss_pred cccCcEEEEcCCCC
Q 010535 495 FHTGDIGEWQPMEL 508 (508)
Q Consensus 495 ~~TGDlg~~d~~G~ 508 (508)
|+|||+|++|+||+
T Consensus 474 ~~TGD~g~~d~dG~ 487 (628)
T TIGR02316 474 YSSFDWGIRDEDGY 487 (628)
T ss_pred EECCceEEEcCCCc
Confidence 99999999999995
No 29
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.1e-52 Score=435.08 Aligned_cols=418 Identities=21% Similarity=0.276 Sum_probs=314.5
Q ss_pred CcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCC
Q 010535 23 GPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNP 101 (508)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~ 101 (508)
.++|++..+...++..+ ....+..++.+ +.+|+++|+++. +.. ..+||+||.++++++|++|.+ .|+++
T Consensus 22 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~~--~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~ 91 (560)
T PLN02574 22 TGIYSSKHPPVPLPSDP-NLDAVSFIFSH--HNHNGDTALIDS---STG----FSISYSELQPLVKSMAAGLYHVMGVRQ 91 (560)
T ss_pred CeeecCCCCCCCCCCCC-CCCHHHHHhcC--cccCCCCEEEEC---CCC----CcccHHHHHHHHHHHHHHHHHHhCCCC
Confidence 45677665332333221 12223344444 679999999865 322 369999999999999999999 99999
Q ss_pred CCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEec
Q 010535 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (508)
Q Consensus 102 gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~ 181 (508)
||+|+++++|+++++++++||+++|++++|++|..+.+++.++++.++++++|++.+....+... ... ++.+.
T Consensus 92 gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~ 164 (560)
T PLN02574 92 GDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL------GVP-VIGVP 164 (560)
T ss_pred CCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc------CCc-EEecC
Confidence 99999999999999999999999999999999999999999999999999999987765544321 111 22221
Q ss_pred CCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccc
Q 010535 182 NVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK 261 (508)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~ 261 (508)
...... ........++++..............++++++++|||||||.||+|.++|+++...+..+.........
T Consensus 165 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 239 (560)
T PLN02574 165 ENYDFD-----SKRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYE 239 (560)
T ss_pred cccccc-----cCccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccc
Confidence 110000 000112345555444322222233467899999999999999999999999999887765432111111
Q ss_pred cCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCCh
Q 010535 262 VCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (508)
Q Consensus 262 ~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (508)
....+++++..+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..+++....
T Consensus 240 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 312 (560)
T PLN02574 240 YPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKG------- 312 (560)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccc-------
Confidence 2235688999999999999875 5567788999988874 999999999999999999999999998652110
Q ss_pred hHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeecccc
Q 010535 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLT 418 (508)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~T 418 (508)
....++ +++|.+++||+++++++.+++.+.+ +..+++.||+|
T Consensus 313 -----------------------------~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~t 355 (560)
T PLN02574 313 -----------------------------VCGEVL--------KSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMT 355 (560)
T ss_pred -----------------------------cccCcc--------ccceEEEEecccCCHHHHHHHHHHCCCCcEEeccccc
Confidence 000112 3899999999999999999999887 68999999999
Q ss_pred CCCcceeeccCC-CcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccc
Q 010535 419 ESCSGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFH 496 (508)
Q Consensus 419 E~~~~~~~~~~~-~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~ 496 (508)
|++.+++..... .....+++|+|+|+++++|+|.+++..++ .|+.|||+|+|++++.||+++++.+.+.| .+|||+
T Consensus 356 E~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~--~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~ 433 (560)
T PLN02574 356 ESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLP--PGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLR 433 (560)
T ss_pred ccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCC--CCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcc
Confidence 998665432222 22345799999999999999944555444 45899999999999999999999998887 689999
Q ss_pred cCcEEEEcCCCC
Q 010535 497 TGDIGEWQPMEL 508 (508)
Q Consensus 497 TGDlg~~d~~G~ 508 (508)
|||+|++|+||+
T Consensus 434 TGDlg~~~~~G~ 445 (560)
T PLN02574 434 TGDIAYFDEDGY 445 (560)
T ss_pred cceEEEEECCCe
Confidence 999999999985
No 30
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-52 Score=433.62 Aligned_cols=404 Identities=21% Similarity=0.257 Sum_probs=308.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh
Q 010535 35 LLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (508)
Q Consensus 35 ~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~ 114 (508)
..+++..+.++.+.|.+.|+++|+++|+++. ++. +.+||+||.++++++|+.|.+.|+++||+|+++++|+++
T Consensus 6 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e 78 (540)
T PRK05857 6 FQAMPQLPSTVLDRVFEQARQQPEAIALRRC---DGT----SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE 78 (540)
T ss_pred ccccccCCcchHHHHHHHHhhCCCcEEEeec---CCC----ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH
Confidence 3445566789999999999999999999865 442 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhc
Q 010535 115 WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (508)
Q Consensus 115 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 194 (508)
+++++|||+++|++++|+++.++.+++.++++.++++++|+++...... ..+......+. ++..+......
T Consensus 79 ~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~------- 149 (540)
T PRK05857 79 TYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMAS-SAVPEALHSIP-VIAVDIAAVTR------- 149 (540)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcc-ccccccccccc-eeEeecccccc-------
Confidence 9999999999999999999999999999999999999999987653211 11111111122 22222111000
Q ss_pred CceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecC
Q 010535 195 GVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (508)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 274 (508)
. +...... ...........+++++++|||||||.||||.++|+++.++........ ........+++.++.+|
T Consensus 150 ---~--~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p 222 (540)
T PRK05857 150 ---E--SEHSLDA-ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEG-LNWVTWVVGETTYSPLP 222 (540)
T ss_pred ---c--ccccccc-cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcc-ccccccccCceeeecCC
Confidence 0 0000000 001112234668899999999999999999999999987655432210 01124456789999999
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 275 LAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 275 l~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
++|..++...+.+++.|+++++.+.++..+++.++++++|+++++|.+++.+++.....
T Consensus 223 ~~h~~~l~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~--------------------- 281 (540)
T PRK05857 223 ATHIGGLWWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA--------------------- 281 (540)
T ss_pred ccccchHHHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccC---------------------
Confidence 99999988888899999998776668899999999999999999999999886532100
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC---
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV--- 431 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~--- 431 (508)
..++ +++|.+++||++++....+++ +.+|+++++.||+||++........+.
T Consensus 282 ----------------~~~~--------~~lr~~~~gG~~~~~~~~~~~-~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~ 336 (540)
T PRK05857 282 ----------------NATV--------PSLRLVGYGGSRAIAADVRFI-EATGVRTAQVYGLSETGCTALCLPTDDGSI 336 (540)
T ss_pred ----------------CCcC--------ccceEEEEcCccCCchhHHHH-HHhCCeeecccCCCcCCceeeecccccccc
Confidence 0112 389999999999988777644 467999999999999986544332221
Q ss_pred -cccccccccccCCeEEEEeecCCCCccCC----CCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCC
Q 010535 432 -FNMIGTVGVPMTTVEARLESVPEMGYDAL----SSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM 506 (508)
Q Consensus 432 -~~~~~s~G~p~~~~~~~i~d~~~~~~~~~----~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~ 506 (508)
....+++|+|++|++++|+| +++..... ..++.|||+|+|+.++.||+++++.+.+.|.+|||+|||+|++|++
T Consensus 337 ~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~ 415 (540)
T PRK05857 337 VKIEAGAVGRPYPGVDVYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRED 415 (540)
T ss_pred cccccCCcCcccCCcEEEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcCC
Confidence 11347899999999999999 66653211 2358899999999999999999999999999999999999999999
Q ss_pred CC
Q 010535 507 EL 508 (508)
Q Consensus 507 G~ 508 (508)
|+
T Consensus 416 g~ 417 (540)
T PRK05857 416 GF 417 (540)
T ss_pred ce
Confidence 85
No 31
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=2.6e-51 Score=426.59 Aligned_cols=415 Identities=23% Similarity=0.312 Sum_probs=327.0
Q ss_pred CCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCC
Q 010535 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (508)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~ 100 (508)
+++-+||+-+.....+ ...++.+++.++++++|+++|+++. +.. +.+||.||.++++++|.+|.+.|++
T Consensus 5 ~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~a~~~~---~~~----~~~ty~el~~~~~~la~~L~~~g~~ 73 (537)
T PLN02246 5 SEEFIFRSKLPDIYIP----NHLPLHDYCFERLSEFSDRPCLIDG---ATG----RVYTYADVELLSRRVAAGLHKLGIR 73 (537)
T ss_pred cceeEecCCCCCCCCC----CCCcHHHHHHHHHHhCCCCeEEEec---CCC----ceeeHHHHHHHHHHHHHHHHHhCCC
Confidence 3455777776654332 3468999999999999999999864 321 5799999999999999999999999
Q ss_pred CCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEe
Q 010535 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (508)
Q Consensus 101 ~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~ 180 (508)
+||+|+++++|+++++++++||+++|++++|++|..+.+++..+++.++++++|++......+.+.... ..+ .++.+
T Consensus 74 ~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~~-~~i~~ 150 (537)
T PLN02246 74 QGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED--DGV-TVVTI 150 (537)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc--CCc-eEEEe
Confidence 999999999999999999999999999999999999999999999999999999988766655433221 111 33444
Q ss_pred cCCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhcc
Q 010535 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG 260 (508)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~ 260 (508)
+... .....+.++........+.....++++++++|||||||.||+|.++|+++...+........ ..
T Consensus 151 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~-~~ 218 (537)
T PLN02246 151 DDPP-----------EGCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-PN 218 (537)
T ss_pred CCCC-----------CCceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccc-cc
Confidence 3221 11234455443332222233456789999999999999999999999999887765432110 01
Q ss_pred ccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCC
Q 010535 261 KVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (508)
Q Consensus 261 ~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (508)
..+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..|++..
T Consensus 219 ~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------- 290 (537)
T PLN02246 219 LYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSP-------- 290 (537)
T ss_pred cCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCc--------
Confidence 25788999999999999999864 6678999999999875 8999999999999999999999998875411
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccc
Q 010535 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGL 417 (508)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~ 417 (508)
.....++ +++|.+++||+++++++.+.+++.+ +..+++.||+
T Consensus 291 -----------------------------~~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~ 333 (537)
T PLN02246 291 -----------------------------VVEKYDL--------SSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGM 333 (537)
T ss_pred -----------------------------cccccCc--------cceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccc
Confidence 0111112 2799999999999999999999988 6789999999
Q ss_pred cCCCcceeeccC----CCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cC
Q 010535 418 TESCSGCFTSLA----DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD 492 (508)
Q Consensus 418 TE~~~~~~~~~~----~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~ 492 (508)
||++.+++.... .....++++|+|+++++++|+|.+++..++ .|+.|||+++|+.++.||+++++.+.+.| .+
T Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~ 411 (537)
T PLN02246 334 TEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLP--RNQPGEICIRGPQIMKGYLNDPEATANTIDKD 411 (537)
T ss_pred cccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCC--CCCceEEEEECCchhccccCCchhhhhcccCC
Confidence 999876543221 112234789999999999999933444444 45899999999999999999999998888 68
Q ss_pred CccccCcEEEEcCCCC
Q 010535 493 GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 493 gw~~TGDlg~~d~~G~ 508 (508)
|||+|||+|++|++|+
T Consensus 412 ~~~~TGD~~~~~~~g~ 427 (537)
T PLN02246 412 GWLHTGDIGYIDDDDE 427 (537)
T ss_pred CCeeecceEEEeCCCe
Confidence 9999999999999984
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-51 Score=427.23 Aligned_cols=400 Identities=24% Similarity=0.374 Sum_probs=330.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+.+.++.+.|++.++.+|+++|+++. + +.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~ 72 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFG---D------QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAA 72 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 35688999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++|+++..+.+++..+++.++++++++++.......... ......+.++......... ......
T Consensus 73 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~ 145 (513)
T PRK07656 73 LGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSAT-TRLPALEHVVICETEEDDP------HTEKMK 145 (513)
T ss_pred HHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHH-hccCCccEEEEEcCccccc------Cccccc
Confidence 999999999999999999999999999999999999987665543332 2223444444443322110 001224
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.|+++...............+++++++|||||||.||+|.++|.++...+......+ ....++++++.+|++|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 220 (513)
T PRK07656 146 TFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-----GLTEGDRYLAANPFFHVF 220 (513)
T ss_pred cHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-----CCCCCCeEEEccchHHHH
Confidence 566666544322334456778999999999999999999999999998888776666 778999999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 280 DQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 280 g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
++.. .+.+++.|+++++... ++..+++.++++++|++.++|.+++.+++....
T Consensus 221 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------------- 275 (513)
T PRK07656 221 GYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDR------------------------- 275 (513)
T ss_pred HHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCc-------------------------
Confidence 9875 6789999999988764 899999999999999999999999998652110
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC-ceeeeccccCCCcceeeccCCCccc--
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVFNM-- 434 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~~~~-- 434 (508)
...++ +++|.+++||+++++++.+++.+.++. .+++.||+||+++++..........
T Consensus 276 ------------~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 335 (513)
T PRK07656 276 ------------SAEDL--------SSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTV 335 (513)
T ss_pred ------------CCCCc--------cceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCcccccccc
Confidence 00111 389999999999999999999999998 9999999999988877665543322
Q ss_pred ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-CCccccCcEEEEcCCCC
Q 010535 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 435 ~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-~gw~~TGDlg~~d~~G~ 508 (508)
.+++|+|+++++++|+| +++..++. |+.|||+++|+.++.||+++++.+...+. +|||+|||+|+++++|+
T Consensus 336 ~~~vG~~~~~~~~~i~d-~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~ 407 (513)
T PRK07656 336 AGTIGTAIAGVENKIVN-ELGEEVPV--GEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGY 407 (513)
T ss_pred CCCccccCCCcEEEEEC-CCCCCCCC--CCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCee
Confidence 57899999999999999 77776654 48999999999999999999988888775 89999999999999884
No 33
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-51 Score=426.93 Aligned_cols=405 Identities=21% Similarity=0.349 Sum_probs=314.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
...|+.+.|++.++++|+++|+++. + +.+||+||.++++++|++|.+ .|+++||+|+++++|++++++++
T Consensus 22 ~~~~~~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~ 92 (562)
T PRK05677 22 EYPNIQAVLKQSCQRFADKPAFSNL----G-----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAV 92 (562)
T ss_pred ccCcHHHHHHHHHHhCCCCeeEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 3468999999999999999999864 2 479999999999999999997 59999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhh---hHHhh----
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ---KKEAE---- 192 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~---- 192 (508)
|||+++|++++|++|..+.+++.++++.++++++|++......+.+.... ...+.++..+..+... .....
T Consensus 93 la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
T PRK05677 93 FGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPK--TGVKHVIVTEVADMLPPLKRLLINAVVK 170 (562)
T ss_pred HHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhc--cCcceeEEecccccccchhhhhcccchh
Confidence 99999999999999999999999999999999999987655443322211 1233333322111000 00000
Q ss_pred -------h-cCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccC
Q 010535 193 -------E-LGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC 263 (508)
Q Consensus 193 -------~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~ 263 (508)
. .......+.+.+... ..........++++++++|||||||.||+|.++|+++...+......+. ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~---~~~ 247 (562)
T PRK05677 171 HVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG---SNL 247 (562)
T ss_pred hccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc---cCC
Confidence 0 000122344444332 1112223446789999999999999999999999999887766554431 122
Q ss_pred C-CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCCh
Q 010535 264 S-EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (508)
Q Consensus 264 ~-~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (508)
. ..+.+++.+|++|.+++.. .+..+..|...++.+. ++..+++.++++++|+++++|.++..++..
T Consensus 248 ~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~---------- 317 (562)
T PRK05677 248 NEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNN---------- 317 (562)
T ss_pred CCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhC----------
Confidence 3 3468899999999999874 6667788887776653 889999999999999999999999887541
Q ss_pred hHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccC
Q 010535 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTE 419 (508)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE 419 (508)
......++ +++|.+++||+++++++.+.+++.++.++++.||+||
T Consensus 318 ---------------------------~~~~~~~~--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE 362 (562)
T PRK05677 318 ---------------------------EAFRKLDF--------SALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTE 362 (562)
T ss_pred ---------------------------cccccCCh--------hhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccc
Confidence 00111112 2799999999999999999999988999999999999
Q ss_pred CCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccC
Q 010535 420 SCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTG 498 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TG 498 (508)
++.++.....+.. .++++|+|+++++++|+| +++..++.| +.|||+|+|+.++.||+++++.+.+.| .+|||+||
T Consensus 363 ~~~~~~~~~~~~~-~~~~vG~~~~~~~v~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TG 438 (562)
T PRK05677 363 TSPVVSVNPSQAI-QVGTIGIPVPSTLCKVID-DDGNELPLG--EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTG 438 (562)
T ss_pred cCcceeecCccCC-CCCccCccCCCCEEEEEC-CCCCCCCCC--CCeEEEEecCccchhhcCCchhhhhccCCCCccccc
Confidence 9877665544322 347899999999999999 777766554 899999999999999999999999888 58999999
Q ss_pred cEEEEcCCCC
Q 010535 499 DIGEWQPMEL 508 (508)
Q Consensus 499 Dlg~~d~~G~ 508 (508)
|+|++|++|+
T Consensus 439 Dlg~~~~~G~ 448 (562)
T PRK05677 439 DIALIQEDGY 448 (562)
T ss_pred ceEEECCCCc
Confidence 9999999985
No 34
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-51 Score=427.44 Aligned_cols=402 Identities=23% Similarity=0.347 Sum_probs=322.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
..++.++|.+.++++|+++|+++. + +.+||+||.+++.++|.+|.+. |+++||+|+++++|+++++++++
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 79 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYY 79 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHH
Confidence 468999999999999999999876 3 4799999999999999999999 99999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhh-------H----
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-------K---- 189 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~---- 189 (508)
||+++|++++|++|..+.+++.++++.++++++|++......+....... .++.++.......... .
T Consensus 80 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (546)
T PRK08314 80 AILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--RLRHVIVAQYSDYLPAEPEIAVPAWLRA 157 (546)
T ss_pred HHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--CcceEEEecchhhcccccccCccccccc
Confidence 99999999999999999999999999999999999987766554332211 2233333211100000 0
Q ss_pred ---HhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCC
Q 010535 190 ---EAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE 266 (508)
Q Consensus 190 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~ 266 (508)
........+..|++...... .........+++++++|||||||.||+|.++|++++.++......+ ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~ 231 (546)
T PRK08314 158 EPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-----NSTPE 231 (546)
T ss_pred ccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCC
Confidence 00000112345666554332 2223345678999999999999999999999999999888876655 67889
Q ss_pred cEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 267 DTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 267 ~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
|++++.+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..++..
T Consensus 232 d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~--------------- 296 (546)
T PRK08314 232 SVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLAS--------------- 296 (546)
T ss_pred ceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhC---------------
Confidence 99999999999999874 6789999999999875 899999999999999999999999887541
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcce
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC 424 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~ 424 (508)
+.....+++ ++|.+++||+++++++.+++.+.++.++++.||+||++...
T Consensus 297 ----------------------~~~~~~~~~--------~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 346 (546)
T PRK08314 297 ----------------------PGLAERDLS--------SLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQT 346 (546)
T ss_pred ----------------------CCccccCch--------hhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccce
Confidence 111112222 78999999999999999999998899999999999998776
Q ss_pred eeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc--C--CccccCcE
Q 010535 425 FTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--D--GWFHTGDI 500 (508)
Q Consensus 425 ~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--~--gw~~TGDl 500 (508)
.....+.. ..+++|+|+++++++|+|.+++..++. |+.|||+|+|+.++.||+++++.+.+.|. + +||+|||+
T Consensus 347 ~~~~~~~~-~~~~~G~~~~g~~~~i~d~~~~~~~~~--g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl 423 (546)
T PRK08314 347 HSNPPDRP-KLQCLGIPTFGVDARVIDPETLEELPP--GEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDL 423 (546)
T ss_pred ecCCCcCC-CCCccCcccCCeEEEEEeCCCCcCCCC--CCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCE
Confidence 65444332 337899999999999999444555544 48999999999999999999998888772 3 59999999
Q ss_pred EEEcCCCC
Q 010535 501 GEWQPMEL 508 (508)
Q Consensus 501 g~~d~~G~ 508 (508)
|++|++|+
T Consensus 424 ~~~~~~g~ 431 (546)
T PRK08314 424 GRMDEEGY 431 (546)
T ss_pred EEEcCCCc
Confidence 99999984
No 35
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-51 Score=425.24 Aligned_cols=388 Identities=20% Similarity=0.219 Sum_probs=311.7
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.++.++|.+.++++|+++|+++. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 113 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAA 113 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHH
Confidence 57999999999999999999864 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+++|++++|+++.++.+++.++++.++++++|++......+...... ......++...+... ...++
T Consensus 114 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~~~ 180 (537)
T PRK13382 114 NRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALAD-CPQATRIVAWTDEDH------------DLTVE 180 (537)
T ss_pred HHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhh-ccccceEEEecCCcc------------cccHH
Confidence 99999999999999999999999999999999997765544332211 112222222221110 12334
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH
Q 010535 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (508)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 282 (508)
.+....... ......++.++++|||||||.||+|.++|.++..........+ ....+++++...|++|.+|+.
T Consensus 181 ~~~~~~~~~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~~ 253 (537)
T PRK13382 181 VLIAAHAGQ--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-----PWRAEEPTVIVAPMFHAWGFS 253 (537)
T ss_pred HHhhccCcC--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-----CCCCCCeEEEecChHhhhHHH
Confidence 443322111 1123457889999999999999999999999888777766555 567889999999999999998
Q ss_pred HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCC
Q 010535 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (508)
Q Consensus 283 ~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (508)
..+.++..|+++++.+. ++..+++.++++++|++.++|++++.+++....
T Consensus 254 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~----------------------------- 304 (537)
T PRK13382 254 QLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAE----------------------------- 304 (537)
T ss_pred HHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCch-----------------------------
Confidence 78888999999988764 899999999999999999999999988642110
Q ss_pred CCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccc
Q 010535 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (508)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p 441 (508)
..+..++ .++|.+++||+++++++.+.|.+.++..+++.||+||++.++..........++++|+|
T Consensus 305 ------~~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p 370 (537)
T PRK13382 305 ------VRNRYSG--------RSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRP 370 (537)
T ss_pred ------hcccCCc--------cceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCcccc
Confidence 0111111 27999999999999999999999999999999999999877665443323345799999
Q ss_pred cCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 442 ~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+++++++|+| +++..++. |+.|||+++|+.++.||+ ++.+. .+.+|||+|||++++|+||+
T Consensus 371 ~~~~~~~i~d-~~~~~~~~--g~~GEl~v~g~~~~~gY~--~~~~~-~~~~g~~~TGDl~~~~~~g~ 431 (537)
T PRK13382 371 AEGTEIRILD-QDFREVPT--GEVGTIFVRNDTQFDGYT--SGSTK-DFHDGFMASGDVGYLDENGR 431 (537)
T ss_pred CcCcEEEEEC-CCCCCCCC--CCeeEEEEEcCCcccCcc--ccchh-hccCCCEeeCceEEEeCCCc
Confidence 9999999999 77776654 489999999999999998 34443 45689999999999999985
No 36
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-51 Score=423.53 Aligned_cols=402 Identities=25% Similarity=0.387 Sum_probs=337.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|.+.++.+|+++|+.+. + +.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~ 73 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD---G------RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAY 73 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45679999999999999999999876 4 35999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++++++..+.+++..+++.+++++++++......+.+... ....++.++..++.... .......
T Consensus 74 la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~ 146 (521)
T PRK06187 74 FAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILP-QLPTVRTVIVEGDGPAA------PLAPEVG 146 (521)
T ss_pred HHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhh-ccCCccEEEEecCcccc------ccccccc
Confidence 9999999999999999999999999999999999999887666544332 23445566655543311 1112345
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.+.++...............+++++++|||||||.||+|.++|.++..........+ .+..++++++.+|++|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~ 221 (521)
T PRK06187 147 EYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-----KLSRDDVYLVIVPMFHVH 221 (521)
T ss_pred cHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-----CCCCCCEEEEeCCchHHh
Confidence 566666554333334455678899999999999999999999999998888876655 788999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
++...+.++..|+++++.+. ++..+++.++++++|.++++|++++.+.+....
T Consensus 222 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-------------------------- 275 (521)
T PRK06187 222 AWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRA-------------------------- 275 (521)
T ss_pred hHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC--------------------------
Confidence 99877779999999998875 899999999999999999999999998652211
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCc-----c
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVF-----N 433 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~-----~ 433 (508)
...++ +++|.+++||+++++++.+++.+.+++.+++.||+||+++++........ .
T Consensus 276 -----------~~~~~--------~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 336 (521)
T PRK06187 276 -----------YFVDF--------SSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWT 336 (521)
T ss_pred -----------CccCc--------chhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccc
Confidence 11112 37899999999999999999999889999999999999877665544332 2
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
..+++|+|++++.++|+| +++..++.+.|+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++|++|+
T Consensus 337 ~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~ 410 (521)
T PRK06187 337 KRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDEDGY 410 (521)
T ss_pred cCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcCCCC
Confidence 457899999999999999 88877776446999999999999999999999999999899999999999999984
No 37
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.9e-51 Score=418.95 Aligned_cols=372 Identities=24% Similarity=0.369 Sum_probs=310.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+.|+.+.|.+++.++||++|+.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEFE---E------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---C------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 478999999999999999999865 3 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|+++..+.+++..+++.++++++++++.......... ...+
T Consensus 72 ~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~------------------------------~~~~ 121 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI------------------------------SVKF 121 (483)
T ss_pred HHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc------------------------------cccH
Confidence 9999999999999999999999999999999999876443321110 0013
Q ss_pred HHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 202 EEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
+++.... ...........+++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g 196 (483)
T PRK03640 122 AELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-----GLTEDDCWLAAVPIFHISG 196 (483)
T ss_pred HHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-----CCCcCcEEEEecCHHHHHH
Confidence 3332222 111122234568899999999999999999999999988776655554 7789999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 281 QIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
+..++.++..|+++++.+. ++..+++.++++++|++.++|+++..++..+...
T Consensus 197 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-------------------------- 250 (483)
T PRK03640 197 LSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-------------------------- 250 (483)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc--------------------------
Confidence 9888889999999999875 9999999999999999999999999886421100
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCC-Cccccccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD-VFNMIGTV 438 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~s~ 438 (508)
. ...++|.+++||+++++.+.+.+++. ++++++.||+||++..+...... .....+++
T Consensus 251 -----------~---------~~~~lr~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~v 309 (483)
T PRK03640 251 -----------T---------YPSSFRCMLLGGGPAPKPLLEQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSA 309 (483)
T ss_pred -----------c---------cCCcceEEEEcCCCCCHHHHHHHHHh-CCCeeeeeccCcccccccccCcccccccCCCc
Confidence 0 00389999999999999999998875 99999999999987654433322 33445899
Q ss_pred ccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 439 G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
|+|+++++++|.+ ++ .. ...|+.|||+|+|+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 310 G~p~~~~~~~i~~-~~-~~--~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~g~ 375 (483)
T PRK03640 310 GKPLFPCELKIEK-DG-VV--VPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDEEGF 375 (483)
T ss_pred ccccCCcEEEEec-CC-Cc--CCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcCCCC
Confidence 9999999999998 43 43 3455899999999999999999999998889999999999999999985
No 38
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-52 Score=382.26 Aligned_cols=394 Identities=20% Similarity=0.235 Sum_probs=332.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|..+|+++||++|+++. + +.|||+||.++++++|..|+++|+++||+|.+.+||..++++++|
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d~---~------~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~F 96 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVIDG---E------RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFF 96 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEecC---c------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHH
Confidence 3589999999999999999999975 3 469999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh----hhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
|++++|+.+|.--|.....+|.++.+..+++.+|.++... ..+.+......+.++.+++.++....
T Consensus 97 ALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~---------- 166 (542)
T COG1021 97 ALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP---------- 166 (542)
T ss_pred HHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc----------
Confidence 9999999999988999999999999999999999886422 22333333445778888887554321
Q ss_pred eeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh
Q 010535 197 SCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (508)
Q Consensus 197 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 275 (508)
...+..+... ....+..+.+.++++++..+.||||.||-|..+|.....++..-.+.| .+....+++|.+|.
T Consensus 167 --~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-----~~~~~tvyL~~LP~ 239 (542)
T COG1021 167 --SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-----GFDQQTVYLCALPA 239 (542)
T ss_pred --chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-----CcCccceEEEeccc
Confidence 1122223222 334445667888999999999999999999999999999999988888 88899999999999
Q ss_pred HHHHHHHH--HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHH
Q 010535 276 AHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (508)
Q Consensus 276 ~~~~g~~~--~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (508)
.|.+.+.. .+..++.|+++|+.+. +++.-+.+|+++++|++..+|.+...|+....
T Consensus 240 AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e--------------------- 298 (542)
T COG1021 240 AHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAE--------------------- 298 (542)
T ss_pred ccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhh---------------------
Confidence 99999885 7889999999999875 99999999999999999999999998876332
Q ss_pred HhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCc
Q 010535 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVF 432 (508)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~ 432 (508)
....+++ |||.+-+||+.+++++.+++...+|+.+.+.+||.|.-...+.-.+...
T Consensus 299 ----------------~~~~~Ls--------SLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E 354 (542)
T COG1021 299 ----------------WERADLS--------SLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPE 354 (542)
T ss_pred ----------------cccCCch--------heeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchH
Confidence 1223344 9999999999999999999999999999999999995433322222223
Q ss_pred cccccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 433 NMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 433 ~~~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
....+-|+|+ |.-+++|+| .||++++.| |+|+|..+||..++|||+.|+.+.++| .+|||+|||++++|+|||
T Consensus 355 ~i~~TQGrPlsP~DEvrvvD-~dg~pv~pG--E~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGy 429 (542)
T COG1021 355 IIIHTQGRPLSPDDEVRVVD-ADGNPVAPG--EVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGY 429 (542)
T ss_pred heeecCCCcCCCcceeEEec-CCCCCCCCC--CcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCce
Confidence 3346789997 789999999 898866555 999999999999999999999999999 899999999999999997
No 39
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.2e-50 Score=422.38 Aligned_cols=412 Identities=21% Similarity=0.299 Sum_probs=322.0
Q ss_pred CCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCC
Q 010535 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (508)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~ 100 (508)
++..+|++.+..... +...|+.+++.+.++++|+++|+.+. .+. +.+||+||.++++++|..|.+.|++
T Consensus 10 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~la~~L~~~g~~ 78 (546)
T PLN02330 10 DNEHIFRSRYPSVPV----PDKLTLPDFVLQDAELYADKVAFVEA---VTG----KAVTYGEVVRDTRRFAKALRSLGLR 78 (546)
T ss_pred ccceeeccCCCCCCC----CCCCcHHHHHhhhhhcCCCccEEEec---CCC----CcccHHHHHHHHHHHHHHHHHhCCC
Confidence 566788888766533 34588999999999999999999864 221 4799999999999999999999999
Q ss_pred CCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEe
Q 010535 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (508)
Q Consensus 101 ~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~ 180 (508)
+||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|+++.....+... .. .++.+
T Consensus 79 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~------~~-~~i~~ 151 (546)
T PLN02330 79 KGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL------GL-PVIVL 151 (546)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc------CC-cEEEe
Confidence 999999999999999999999999999999999999999999999999999999998776655321 11 12333
Q ss_pred cCCChhhhHHhhhcCceeeeHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhh
Q 010535 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (508)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~ 257 (508)
+.... .....|++++..... .........+++++++|||||||.||+|.++|+++..++.......
T Consensus 152 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~- 220 (546)
T PLN02330 152 GEEKI----------EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV- 220 (546)
T ss_pred cCCCC----------CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc-
Confidence 22110 112345555543311 1122334568899999999999999999999999987665421111
Q ss_pred hccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhh
Q 010535 258 VTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (508)
Q Consensus 258 ~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 335 (508)
.......++.+..+|++|.+++. .++.++..|+++++.+. ++..+++.++++++|++.++|+++..++..
T Consensus 221 --~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~------ 292 (546)
T PLN02330 221 --GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKN------ 292 (546)
T ss_pred --CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhC------
Confidence 11223456889999999999987 46778999999988864 999999999999999999999999988641
Q ss_pred cCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeee
Q 010535 336 SGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQG 414 (508)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~ 414 (508)
+....+++.. .++|.+++||+++++++.+++.+.+ +.++++.
T Consensus 293 -------------------------------~~~~~~~~~~------~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~ 335 (546)
T PLN02330 293 -------------------------------PIVEEFDLSK------LKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEA 335 (546)
T ss_pred -------------------------------ccccccccch------heeeeEEEcCCcCCHHHHHHHHHHcCCCeEEec
Confidence 1111111110 1589999999999999999999988 8999999
Q ss_pred ccccCCCcceeeccCCC----cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc
Q 010535 415 YGLTESCSGCFTSLADV----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 490 (508)
Q Consensus 415 YG~TE~~~~~~~~~~~~----~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~ 490 (508)
||+||++.+........ ....+++|+|+|+++++|+|.+++..++ .|+.|||+|+|+.++.||+++++.+.+.+
T Consensus 336 YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p--~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 413 (546)
T PLN02330 336 YGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLP--KNTPGELCVRSQCVMQGYYNNKEETDRTI 413 (546)
T ss_pred ccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCC--CCCceEEEEecchhhhhhccCccchhhhc
Confidence 99999876544321111 1233689999999999999944455444 45899999999999999999999988877
Q ss_pred -cCCccccCcEEEEcCCCC
Q 010535 491 -VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 491 -~~gw~~TGDlg~~d~~G~ 508 (508)
.+|||+|||+|++++||+
T Consensus 414 ~~~g~~~TGD~~~~~~dG~ 432 (546)
T PLN02330 414 DEDGWLHTGDIGYIDDDGD 432 (546)
T ss_pred cCCCceecccEEEEeCCCc
Confidence 689999999999999985
No 40
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.8e-50 Score=420.35 Aligned_cols=408 Identities=21% Similarity=0.253 Sum_probs=321.4
Q ss_pred ccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 010535 27 RCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCG 106 (508)
Q Consensus 27 ~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Va 106 (508)
|..+...++.. ..++.+.+++.++.+|+++|+++. +...+.++.+||+||.++++++|.+|.+.|+++|++|+
T Consensus 10 ~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~ 82 (538)
T TIGR03208 10 RAASKAAGLWR----DRTINDHFDAAVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVS 82 (538)
T ss_pred hhhhhhcCccc----cCcHHHHHHHHHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 44444444443 368999999999999999999864 22223346899999999999999999999999999999
Q ss_pred EEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh----hHhhcCccCCCCccEEEEecC
Q 010535 107 IYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFAN 182 (508)
Q Consensus 107 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~i~~~~ 182 (508)
++++|+++++++++||+++|++++|++|..+.+++.++++.++++++++++.... ...............++..+.
T Consensus 83 i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (538)
T TIGR03208 83 FQLPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDG 162 (538)
T ss_pred EECCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecC
Confidence 9999999999999999999999999999999999999999999999999875421 111111122233445555432
Q ss_pred CChhhhHHhhhcCceeeeHHHHHhcCC-C--C-----CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhh
Q 010535 183 VSSSQKKEAEELGVSCFSWEEFLQLGT-L--D-----CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 254 (508)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~-----~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~ 254 (508)
... ..++.++.... . . ........+++++++|||||||.||+|.++|+++...+.....
T Consensus 163 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~ 229 (538)
T TIGR03208 163 DGD-------------DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE 229 (538)
T ss_pred CCC-------------cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh
Confidence 211 12332222110 0 0 1112346789999999999999999999999999998887766
Q ss_pred hhhhccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHH
Q 010535 255 MFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 332 (508)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 332 (508)
.+ .+..++++++.+|++|..++.. .+.+++.|+++++.+. ++..+++.++++++|++.++|.++..++.....
T Consensus 230 ~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~ 304 (538)
T TIGR03208 230 RL-----ELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKE 304 (538)
T ss_pred hc-----CCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhc
Confidence 65 6778999999999999998764 7788999999988775 899999999999999999999999887642211
Q ss_pred hhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCcee
Q 010535 333 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 412 (508)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~ 412 (508)
.. .++ +++|.+++||+++++++.+++.+.++.+++
T Consensus 305 ~~-------------------------------------~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~ 339 (538)
T TIGR03208 305 SG-------------------------------------APV--------PSLFTFLCAGAPIPGILVERAWELLGALIV 339 (538)
T ss_pred cC-------------------------------------CCC--------CcceEEEEcCCCCCHHHHHHHHHHcCCeEE
Confidence 00 001 378999999999999999999998899999
Q ss_pred eeccccCCCcceeeccCCC-cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc
Q 010535 413 QGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV 491 (508)
Q Consensus 413 ~~YG~TE~~~~~~~~~~~~-~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~ 491 (508)
+.||+||++.+........ .....++|+|+|+++++|+| +++..++ .|+.|||+++|+.++.||+++++.+.. ..
T Consensus 340 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~--~g~~Gel~v~g~~~~~gy~~~~~~~~~-~~ 415 (538)
T TIGR03208 340 SAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLS--QGETGRLLVRGCSNFGGYLKRPHLNST-DA 415 (538)
T ss_pred eeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCc--CCCCcEEEEecCcccccccCCcccccc-cC
Confidence 9999999987765444322 12235789999999999999 7776654 458999999999999999999887643 36
Q ss_pred CCccccCcEEEEcCCCC
Q 010535 492 DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 492 ~gw~~TGDlg~~d~~G~ 508 (508)
+|||+|||+|++|++|+
T Consensus 416 ~~~~~TGD~~~~~~~g~ 432 (538)
T TIGR03208 416 EGWFDTGDLAFQDAEGY 432 (538)
T ss_pred CCceeccceEEECCCCc
Confidence 89999999999999985
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-51 Score=433.06 Aligned_cols=408 Identities=17% Similarity=0.184 Sum_probs=311.6
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
+...++|+++++.+|+++|+++. +..++..+.+||+||.++++++|++|.++|+++||+|+++++|+++++++++||
T Consensus 53 n~~~~~l~~~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 129 (629)
T PRK10524 53 NLCHNAVDRHLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLAC 129 (629)
T ss_pred eHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 34577888888899999999986 433344578999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhHhhcCccCCCCccEEEEecCCChhhhHHhhh
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE 193 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 193 (508)
+++|++++|++|.++.+++..+++.++++++|+++... ..+.++..........++.++...... ..
T Consensus 130 ~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~~ 205 (629)
T PRK10524 130 ARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM----AR 205 (629)
T ss_pred HHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----Cc
Confidence 99999999999999999999999999999999976421 222222211112334555554321100 00
Q ss_pred cCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhh-hhhhhhccccCCCCcEEEE
Q 010535 194 LGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV-DQMFVVTGKVCSEEDTYFS 271 (508)
Q Consensus 194 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 271 (508)
.......++++..... ..........+++++++|||||||.||||.++|.+++...... ...+ .+..+|++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~ 280 (629)
T PRK10524 206 VAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF-----GGKAGETFFC 280 (629)
T ss_pred ccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCCEEEE
Confidence 0111234555544321 1122223467899999999999999999999999876544432 2223 6778899999
Q ss_pred ecChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHH
Q 010535 272 FLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (508)
Q Consensus 272 ~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (508)
..|+.|..+.. .++.+++.|+++++..+ ++..+++.++++++|+++++|++++.+.+..
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~--------------- 345 (629)
T PRK10524 281 ASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQD--------------- 345 (629)
T ss_pred cCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcC---------------
Confidence 99999988865 47789999999998763 6889999999999999999999998875410
Q ss_pred HHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCccee
Q 010535 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCF 425 (508)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~ 425 (508)
.......+++ +||.+++||+++++++.+++.+.++.++++.||+||++..+.
T Consensus 346 --------------------~~~~~~~~l~--------~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~ 397 (629)
T PRK10524 346 --------------------PALLRKHDLS--------SLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPIL 397 (629)
T ss_pred --------------------cccccccChh--------heeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhh
Confidence 0001122233 899999999999999999999999999999999999985443
Q ss_pred eccCC---CcccccccccccCCeEEEEeecC-CCCccCCCCCCCceEEEecC---cccccccCCcccccccc----cCCc
Q 010535 426 TSLAD---VFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVI----VDGW 494 (508)
Q Consensus 426 ~~~~~---~~~~~~s~G~p~~~~~~~i~d~~-~~~~~~~~~~~~GEl~v~g~---~v~~gY~~~~~~~~~~~----~~gw 494 (508)
..... .....+++|+|+++++++|+| + +|..++ .|+.|||+++|| .++.||+++++...+.+ .+||
T Consensus 398 ~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~g~~~~--~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (629)
T PRK10524 398 AIARGVEDRPTRLGSPGVPMYGYNVKLLN-EVTGEPCG--PNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQV 474 (629)
T ss_pred cCCCCcccCcCCCCCcccCcCCceEEEEe-CCCCCCCC--CCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcE
Confidence 32221 123347899999999999999 6 776654 458999999998 57889999987665543 4689
Q ss_pred cccCcEEEEcCCCC
Q 010535 495 FHTGDIGEWQPMEL 508 (508)
Q Consensus 495 ~~TGDlg~~d~~G~ 508 (508)
|+|||+|++|+||+
T Consensus 475 ~~TGDl~~~d~dG~ 488 (629)
T PRK10524 475 YSTFDWGIRDADGY 488 (629)
T ss_pred EEcCCcEEEcCCCc
Confidence 99999999999985
No 42
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.9e-51 Score=425.56 Aligned_cols=407 Identities=25% Similarity=0.408 Sum_probs=320.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++++++++++|+++|+.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 101 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF---G------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYA 101 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHH
Confidence 458999999999999999999875 3 4699999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhH------------
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKK------------ 189 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 189 (508)
|+++|++++|++|.++.+++.++++.++++++|+++.....+.+.... .....++.++........
T Consensus 102 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 179 (573)
T PRK05605 102 VLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRT--TPLETIVSVNMIAAMPLLQRLALRLPIPAL 179 (573)
T ss_pred HHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhc--cccceeEeeecccccccccccccccccccc
Confidence 999999999999999999999999999999999988765544332211 122233333211000000
Q ss_pred -----HhhhcCceeeeHHHHHhcCCCC----CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhcc
Q 010535 190 -----EAEELGVSCFSWEEFLQLGTLD----CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG 260 (508)
Q Consensus 190 -----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~ 260 (508)
...........|+++....... ........+++++++|||||||.||+|.++|+++...+......+ .
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~ 256 (573)
T PRK05605 180 RKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWV---P 256 (573)
T ss_pred cccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhc---c
Confidence 0000011234566655443111 122335678999999999999999999999999988776543332 1
Q ss_pred ccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCC
Q 010535 261 KVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (508)
Q Consensus 261 ~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (508)
.....++++++.+|++|.+|+.. .+.+++.|+++++.+. ++..+++.++++++|++.++|.+++.+++....
T Consensus 257 ~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~------ 330 (573)
T PRK05605 257 GLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEE------ 330 (573)
T ss_pred ccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccc------
Confidence 11234789999999999999875 5678899999988875 999999999999999999999999998652211
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeecccc
Q 010535 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLT 418 (508)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~T 418 (508)
...++ +++|.+++||+++++++.+++.+.++..+++.||+|
T Consensus 331 -------------------------------~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~T 371 (573)
T PRK05605 331 -------------------------------RGVDL--------SGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLT 371 (573)
T ss_pred -------------------------------cCCCc--------hhccEEEECCCcCCHHHHHHHHHHhCCCeecccccc
Confidence 01112 279999999999999999999998899999999999
Q ss_pred CCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccC
Q 010535 419 ESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTG 498 (508)
Q Consensus 419 E~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TG 498 (508)
|+++++..........++++|+|+++++++|+| +++...++..|+.|||+++|+.++.||+++++.+.+.|.+|||+||
T Consensus 372 E~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TG 450 (573)
T PRK05605 372 ETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVD-PEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTG 450 (573)
T ss_pred hhchhhhcCCcccCCcCCccccCCCCCEEEEEc-CCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccC
Confidence 998877665544444457999999999999999 6652233445689999999999999999999999999988999999
Q ss_pred cEEEEcCCCC
Q 010535 499 DIGEWQPMEL 508 (508)
Q Consensus 499 Dlg~~d~~G~ 508 (508)
|+|++|++|+
T Consensus 451 D~~~~~~~g~ 460 (573)
T PRK05605 451 DVVVMEEDGF 460 (573)
T ss_pred CEEEEcCCCc
Confidence 9999999985
No 43
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=5.6e-51 Score=425.67 Aligned_cols=392 Identities=19% Similarity=0.232 Sum_probs=302.5
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCC----CCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKV----GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~----~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~ 118 (508)
.++.+.|.+.++++|+++|+++. +..+ ..++.+||+||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 67889999999999999999875 3321 1234799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC--hhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK--IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
++||+++|++++|++|.++.+++.++++.++++++|++... ...+.... ....+.++.++... ..
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~----------~~ 149 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG---KPSVRRLVTVGGRL----------LW 149 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC---ccchhheecccccc----------cc
Confidence 99999999999999999999999999999999999987521 11111110 01222233322110 00
Q ss_pred eeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh
Q 010535 197 SCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (508)
Q Consensus 197 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 275 (508)
....++++.... ...........+++++++|||||||.||+|.++|+++...+......+ .+..+++.++.+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~pl 224 (552)
T PRK09274 150 GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-----GIEPGEIDLPTFPL 224 (552)
T ss_pred CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-----CCCCCceeeeccCH
Confidence 112344443222 112223344678999999999999999999999999999888877666 67788999999999
Q ss_pred HHHHHHHHHHHHHhcCcEEEEec--------CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHH
Q 010535 276 AHIYDQIIETHCIHKGCSIGFWR--------GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (508)
Q Consensus 276 ~~~~g~~~~~~~l~~G~~~v~~~--------~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (508)
+|.+++ ..|.++++.. .++..+++.++++++|+++++|++++.|++.....
T Consensus 225 ~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-------------- 283 (552)
T PRK09274 225 FALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN-------------- 283 (552)
T ss_pred HHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc--------------
Confidence 886553 3477776653 27899999999999999999999999987532111
Q ss_pred HHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc--CCceeeeccccCCCccee
Q 010535 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGLTESCSGCF 425 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~ 425 (508)
..++ +++|.+++||+++++++.+++++.+ |..+++.||+||+++++.
T Consensus 284 -----------------------~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~ 332 (552)
T PRK09274 284 -----------------------GIKL--------PSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISS 332 (552)
T ss_pred -----------------------CCCC--------chhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEe
Confidence 0111 3799999999999999999999998 469999999999987665
Q ss_pred eccCC---------CcccccccccccCCeEEEEeecCCCC-------ccCCCCCCCceEEEecCcccccccCCccccccc
Q 010535 426 TSLAD---------VFNMIGTVGVPMTTVEARLESVPEMG-------YDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 489 (508)
Q Consensus 426 ~~~~~---------~~~~~~s~G~p~~~~~~~i~d~~~~~-------~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~ 489 (508)
..... ......++|+|+|+++++|+| +++. ..++..|+.|||+|+|+.++.||+++++.+...
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd-~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~ 411 (552)
T PRK09274 333 IESREILFATRAATDNGAGICVGRPVDGVEVRIIA-ISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLA 411 (552)
T ss_pred ecchhhhccccccccCCCCcccCccCCCceEEEEe-ccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhh
Confidence 43322 011124789999999999998 4321 123445689999999999999999999988876
Q ss_pred c---cCC--ccccCcEEEEcCCCC
Q 010535 490 I---VDG--WFHTGDIGEWQPMEL 508 (508)
Q Consensus 490 ~---~~g--w~~TGDlg~~d~~G~ 508 (508)
| .+| ||+|||+|++|+||+
T Consensus 412 ~~~~~~g~~w~~TGDlg~~d~dG~ 435 (552)
T PRK09274 412 KIPDGQGDVWHRMGDLGYLDAQGR 435 (552)
T ss_pred hcccCCCCcEEEcCCEEEEccCCc
Confidence 6 356 999999999999985
No 44
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.4e-50 Score=419.55 Aligned_cols=401 Identities=21% Similarity=0.280 Sum_probs=320.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|++.++++|+++|+++. + ..+.++.+||.||.++++++|.+|.++|+++||+|+++++|+++++++++|
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~---~-~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFE---S-SGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcc---c-CCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 468999999999999999999876 4 334557899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|+++++++|..+.+++.++++.++++++|++......+.+.........+.++........ .....++
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 153 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPA--------DDGVSSF 153 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcc--------cccccCH
Confidence 99999999999999999999999999999999999887666555443333344555554432110 0123345
Q ss_pred HHHHhcCCC-CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 202 EEFLQLGTL-DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
++....... .....+...+++++++|||||||.||+|.++|.++.......... ..+..++++++.+|++|..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~ 228 (517)
T PRK08008 154 TQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQ-----CALRDDDVYLTVMPAFHIDC 228 (517)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhh-----cCCCCCCeEEEecCcHHHHH
Confidence 554433311 112233456899999999999999999999999998655432222 24678899999999999877
Q ss_pred HH-HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 281 QI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 281 ~~-~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
.. .++.++..|+++++.+. ++..+++.++++++|++.++|.+++.++....
T Consensus 229 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------------- 281 (517)
T PRK08008 229 QCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPP--------------------------- 281 (517)
T ss_pred HHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCC---------------------------
Confidence 66 47788999999999875 89999999999999999999999988753100
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccccccc
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTV 438 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~ 438 (508)
.+. ... +.++.+.++ .+++++....+.+.++.++++.||+||+++.++..........+++
T Consensus 282 -------~~~---~~~--------~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 342 (517)
T PRK08008 282 -------SAN---DRQ--------HCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSI 342 (517)
T ss_pred -------ccc---ccc--------ccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCcc
Confidence 000 000 256777765 4789999999999889999999999999876665544444444789
Q ss_pred ccccCCeEEEEeecCCCCccCCCCCCCceEEEec---CcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRG---NTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 439 G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g---~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
|.|+++++++|+| +++..++. |+.|||+++| +.++.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 343 G~~~~g~~~~i~d-~~~~~~~~--g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 413 (517)
T PRK08008 343 GRPGFCYEAEIRD-DHNRPLPA--GEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGF 413 (517)
T ss_pred ccCCCCcEEEEEC-CCCCCCCC--CCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCc
Confidence 9999999999999 77766654 4899999998 689999999999999888 689999999999999985
No 45
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.5e-51 Score=417.87 Aligned_cols=374 Identities=16% Similarity=0.177 Sum_probs=307.7
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
+++.+.|+++++++|+++|+.+. + +.+||.||.++++++|.+|.+.|. +|++|+|+++|+++++++++||
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~ 70 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN---D------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGA 70 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC---C------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 36789999999999999999865 3 479999999999999999999985 8999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+++|++++|+++.++.+++.++++.++++++|++......+... . ..++..+ .+.
T Consensus 71 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------~-~~~~~~~------------------~~~ 125 (487)
T PRK07638 71 AMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE------E-GRVIEID------------------EWK 125 (487)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc------c-ceEEEeh------------------hhh
Confidence 99999999999999999999999999999999988654433210 0 1122211 111
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH
Q 010535 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (508)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 282 (508)
+................+++++|+|||||||.||+|.++|+++...+......+ .+..+|+++...|++|..++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~l~ 200 (487)
T PRK07638 126 RMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-----HMKREDSVLIAGTLVHSLFLY 200 (487)
T ss_pred hhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CcCCCCEEEEeecchHHHHHH
Confidence 111111111111223346789999999999999999999999998888766655 678899999999999998877
Q ss_pred HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCC
Q 010535 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (508)
Q Consensus 283 ~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (508)
..+.+++.|+++++.+. ++..+++.++++++|+++++|++++.+.+..
T Consensus 201 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------------- 249 (487)
T PRK07638 201 GAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN------------------------------- 249 (487)
T ss_pred HHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc-------------------------------
Confidence 78889999999998874 8999999999999999999999999886420
Q ss_pred CCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCccccccccc
Q 010535 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGV 440 (508)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~ 440 (508)
. . ..+.+.++++|+++++++.+++.+.+ +..+++.||+||++.++...........+++|+
T Consensus 250 -----~-~------------~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 311 (487)
T PRK07638 250 -----R-V------------IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGR 311 (487)
T ss_pred -----C-c------------CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCc
Confidence 0 0 02456678889999999999999988 789999999999998766554433444579999
Q ss_pred ccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 441 PMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 441 p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
|+++++++|+| ++|..++. |+.|||+|+|+.++.||+++++.+.+.+.+|||+|||+|++|+||+
T Consensus 312 ~~~~~~~~i~d-~~g~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g~ 376 (487)
T PRK07638 312 PFHNVQVRICN-EAGEEVQK--GEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDEEGF 376 (487)
T ss_pred ccCCcEEEEEC-CCCCCCCC--CCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcCCCe
Confidence 99999999999 77776654 5899999999999999999998887777899999999999999985
No 46
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-50 Score=421.35 Aligned_cols=413 Identities=19% Similarity=0.274 Sum_probs=323.9
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHH
Q 010535 39 PAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWII 117 (508)
Q Consensus 39 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~ 117 (508)
.+...|+.++|++.+..+|+++|+++. +. .++.+||+||.+++.++|.+|.+ .|+++||+|+++++|++++++
T Consensus 6 ~~~~~~~~~~l~~~a~~~~~~~a~~~~---~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~ 79 (576)
T PRK05620 6 QDVPLSLTRILEYGSTVHGDTTVTTWG---GA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLE 79 (576)
T ss_pred hcCCCcHHHHHHHHHHhCCCceEEEEc---CC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHH
Confidence 344578999999999999999999864 21 24789999999999999999986 799999999999999999999
Q ss_pred HHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
+++||+++|+++++++|..+.+++.++++.++++++|++......+.+.... ....+.++..+................
T Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 158 (576)
T PRK05620 80 VLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKE-CPCVRAVVFIGPSDADSAAAHMPEGIK 158 (576)
T ss_pred HHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhh-CccccEEEEecCcccccchhccccccc
Confidence 9999999999999999999999999999999999999998776665444332 234455555543221111101111223
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHH
Q 010535 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
..+|+++.+............++++++++|||||||.||+|.++|+++.......... ....+..++++++.+|++|
T Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h 235 (576)
T PRK05620 159 VYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTT---DSLAVTHGESFLCCVPIYH 235 (576)
T ss_pred cccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhh---hhcCCCCCCeEEEeCChHH
Confidence 4567887765432223334567899999999999999999999999986554432211 0125778999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhh
Q 010535 278 IYDQIIETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (508)
Q Consensus 278 ~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (508)
.+++...+.++..|+++++.. .++..+++.++++++|+++++|.++..++.......
T Consensus 236 ~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------- 294 (576)
T PRK05620 236 VLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP--------------------- 294 (576)
T ss_pred hhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC---------------------
Confidence 999988888999999998875 389999999999999999999999988764321000
Q ss_pred hccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC----
Q 010535 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV---- 431 (508)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~---- 431 (508)
.+. .++|.+++||+++++++.+.+++.+|+++++.||+||++..+.......
T Consensus 295 ----------------~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 350 (576)
T PRK05620 295 ----------------PER--------MSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSG 350 (576)
T ss_pred ----------------ccc--------CceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCcccc
Confidence 000 2799999999999999999999988999999999999987765543321
Q ss_pred ---cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccc----------------cccc-c
Q 010535 432 ---FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT----------------EEVI-V 491 (508)
Q Consensus 432 ---~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~----------------~~~~-~ 491 (508)
.....++|++.++++++|+| + +..++...++.|||+++|+.++.||+++++.+ .+.| .
T Consensus 351 ~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~ 428 (576)
T PRK05620 351 EARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTA 428 (576)
T ss_pred ccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhccccc
Confidence 01124789999999999999 5 65555444578999999999999999999877 2223 4
Q ss_pred CCccccCcEEEEcCCCC
Q 010535 492 DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 492 ~gw~~TGDlg~~d~~G~ 508 (508)
+|||+|||+|++|+||+
T Consensus 429 ~g~~~TGD~~~~~~dg~ 445 (576)
T PRK05620 429 DGWLRTGDVGSVTRDGF 445 (576)
T ss_pred CCcEecCceEEEcCCce
Confidence 78999999999999984
No 47
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.5e-50 Score=419.78 Aligned_cols=393 Identities=19% Similarity=0.202 Sum_probs=312.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|+++++.+|+++|+++. + +.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 92 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICG---N------RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFA 92 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeC---C------ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 467999999999999999999864 3 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh----hHhhcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
|+++|++++++++..+.+++.++++.+++++++++..... ..........+.++.++........
T Consensus 93 ~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 161 (527)
T TIGR02275 93 LLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVE----------- 161 (527)
T ss_pred HHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCc-----------
Confidence 9999999999999999999999999999999999875321 1111111122233444443221100
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHH
Q 010535 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
....................++++++++|||||||.||+|.++|.++...+......+ .+..++++++.+|++|
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~P~~h 235 (527)
T TIGR02275 162 -AELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----WLTQQTRYLCALPAAH 235 (527)
T ss_pred -chhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCCEEEECCChHh
Confidence 0111111111111122345678999999999999999999999999999888876655 6778999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.+++.. .+.++..|+++++.+. ++..+++.++++++|++.++|.+++.+++.....
T Consensus 236 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--------------------- 294 (527)
T TIGR02275 236 NYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKS--------------------- 294 (527)
T ss_pred hhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCcccc---------------------
Confidence 999874 6778999999988764 8999999999999999999999998876532110
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~ 434 (508)
..++ +++|.+++||+++++++.+++.+.+|.++++.||+||++.............
T Consensus 295 ----------------~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~ 350 (527)
T TIGR02275 295 ----------------RYDL--------SSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEII 350 (527)
T ss_pred ----------------CCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccc
Confidence 0011 3899999999999999999999988999999999999654332221112223
Q ss_pred cccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 435 IGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 435 ~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
.+++|+|+ ++..++|+| +++...+. |+.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 351 ~~~~G~~~~~~~~v~i~d-~~g~~~~~--g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~ 423 (527)
T TIGR02275 351 FTTQGRPMSPDDEVRVVD-DHGNPVAP--GETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGY 423 (527)
T ss_pred cccCCCCCCCCceEEEEC-CCCCCCCC--CCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCcc
Confidence 46899999 489999999 77765554 5899999999999999999999998888 689999999999999985
No 48
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-50 Score=420.38 Aligned_cols=398 Identities=24% Similarity=0.324 Sum_probs=325.3
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|.+.++++|+++|+++. + +.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~ 79 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWL 79 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999876 4 579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|+++..+.+++..+++.++++++|++......+.+...... ...+........ ......+..
T Consensus 80 a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~ 151 (523)
T PRK08316 80 ACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--VDTLILSLVLGG------REAPGGWLD 151 (523)
T ss_pred HHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--ccceeeeecccc------cccccchhh
Confidence 999999999999999999999999999999999999887766544332211 111111100000 011122445
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
++++...............+++++++|||||||.||+|.++|.++...+......+ .+..+++++..+|++|..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g 226 (523)
T PRK08316 152 FADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-----DMSADDIPLHALPLYHCAQ 226 (523)
T ss_pred HHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCCceEEEccCCchhhh
Confidence 55555443222233456778999999999999999999999999998887766655 6888999999999999999
Q ss_pred HHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 281 QII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 281 ~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
+.. .+.++..|+++++.+. ++..+++.++++++|++.++|.++..+++..
T Consensus 227 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------------------------- 278 (523)
T PRK08316 227 LDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHP---------------------------- 278 (523)
T ss_pred HHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCc----------------------------
Confidence 875 5567889999999864 9999999999999999999999998876421
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC-ccccc
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV-FNMIG 436 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~ 436 (508)
..+..++ +++|.+++||+.++.++.+.+++.+ +..+++.||+||++.++....... ....+
T Consensus 279 ---------~~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 341 (523)
T PRK08316 279 ---------DFDTRDL--------SSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPG 341 (523)
T ss_pred ---------ccccCCc--------ccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccC
Confidence 0111122 2799999999999999999999987 789999999999988766544322 23347
Q ss_pred ccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 437 TVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 437 s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
++|+|+++++++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 342 ~~G~~~~~~~~~i~~-~~~~~~~~--g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~ 410 (523)
T PRK08316 342 SAGRPVLNVETRVVD-DDGNDVAP--GEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDEEGY 410 (523)
T ss_pred CcccCCCCcEEEEEc-CCCCCCCC--CCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcCCce
Confidence 899999999999999 77776655 4899999999999999999999999999999999999999999985
No 49
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.2e-50 Score=418.64 Aligned_cols=396 Identities=21% Similarity=0.291 Sum_probs=317.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|+..++++|+++|+++. ++ +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 21 ~~~~l~~~~~~~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~l 92 (547)
T PRK06087 21 GDASLADYWQQTARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYL 92 (547)
T ss_pred CCCCHHHHHHHHHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4468999999999999999999865 43 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhHhhcCccCCCCccEEEEecCCChhhhHHhhhcC
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
||+++|++++|++|..+.+++..+++.++++++++++... ..+..... .....+.++.++.....
T Consensus 93 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------- 162 (547)
T PRK06087 93 ACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQN-QLPQLQQIVGVDKLAPA--------- 162 (547)
T ss_pred HHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHh-hCCCCcEEEEeCCcCCC---------
Confidence 9999999999999999999999999999999999976421 22222211 22334455555432211
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh
Q 010535 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 275 (508)
.....+.++...............+++++|+|||||||.||+|.++|.++......+...+ .+..++++++.+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl 237 (547)
T PRK06087 163 TSSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-----NLTWQDVFMMPAPL 237 (547)
T ss_pred cCccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeEEEecch
Confidence 0122444544333111122345678999999999999999999999999988877766555 67889999999999
Q ss_pred HHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 276 AHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 276 ~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
+|.+|+.. .+.+++.|+++++.+. ++..+++.++++++++++++|..+..+++.....
T Consensus 238 ~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~-------------------- 297 (547)
T PRK06087 238 GHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ-------------------- 297 (547)
T ss_pred HHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC--------------------
Confidence 99999874 6678899999998875 9999999999999999999888777765421100
Q ss_pred hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC-c
Q 010535 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-F 432 (508)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~ 432 (508)
..++ +++|.+++||+++++++.+.+.+. |+++++.||+||++.+........ .
T Consensus 298 -----------------~~~~--------~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~ 351 (547)
T PRK06087 298 -----------------PADL--------SALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLS 351 (547)
T ss_pred -----------------CCCC--------CCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchh
Confidence 0011 389999999999999999988875 999999999999987765443322 1
Q ss_pred ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 433 NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 433 ~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
...+++|+|++++.++++| +++..++. |+.|||+++|+.++.||+++++.+...| .+|||+|||+|++|++|+
T Consensus 352 ~~~~~~G~~~~~~~~~i~d-~~~~~~~~--g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 425 (547)
T PRK06087 352 RFMHTDGYAAAGVEIKVVD-EARKTLPP--GCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGY 425 (547)
T ss_pred hcCCcCCccCCCceEEEEc-CCCCCCcC--CCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCC
Confidence 2236789999999999999 88776654 4899999999999999999999888877 579999999999999985
No 50
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.1e-50 Score=418.20 Aligned_cols=397 Identities=20% Similarity=0.227 Sum_probs=318.9
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 37 ~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
..|....++.++|++.++.+|+++|+++. + +.+||+||.+++.++|.+|.+.|+++|++|+++++|+++++
T Consensus 15 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~ 85 (542)
T PRK06155 15 PLPPSERTLPAMLARQAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFL 85 (542)
T ss_pred cCCccccCHHHHHHHHHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH
Confidence 34456788999999999999999999865 3 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 117 IAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 117 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
++++||+++|++++|+++.++.+++..+++.+++++++++......+...... ...++.++.++..... ....
T Consensus 86 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~ 158 (542)
T PRK06155 86 DVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPG-DLPLPAVWLLDAPASV------SVPA 158 (542)
T ss_pred HHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccc-ccCcceEEEecCcccc------cccc
Confidence 99999999999999999999999999999999999999998776655443221 1234445554432110 0000
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChH
Q 010535 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 276 (508)
.+ ...++.. ...........++++++++|||||||.||+|.++|.++..........+ .+..++++++.+|++
T Consensus 159 ~~-~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~ 231 (542)
T PRK06155 159 GW-STAPLPP-LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-----EIGADDVLYTTLPLF 231 (542)
T ss_pred cc-chhhhcc-cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-----CCCCCCEEEEecCHH
Confidence 00 0111111 1111122334678999999999999999999999999988777665555 678899999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhh
Q 010535 277 HIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (508)
Q Consensus 277 ~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (508)
|..++...+.+++.|+++++.+. ++..+++.++++++|+++++|+++..+.+....
T Consensus 232 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~----------------------- 288 (542)
T PRK06155 232 HTNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPAR----------------------- 288 (542)
T ss_pred HHHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCc-----------------------
Confidence 99999888899999999998874 899999999999999999999999887542100
Q ss_pred hccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccc
Q 010535 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMI 435 (508)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~ 435 (508)
..... ++++.++.|| +++++.+.+++.+++++++.||+||++.++..... ....
T Consensus 289 --------------~~~~~--------~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~--~~~~ 342 (542)
T PRK06155 289 --------------ESDRA--------HRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTHG--SQRP 342 (542)
T ss_pred --------------ccccc--------CceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCCC--CCCC
Confidence 00001 3788877665 57899999999999999999999999887655332 2334
Q ss_pred cccccccCCeEEEEeecCCCCccCCCCCCCceEEEecC---cccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 436 ~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~---~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+++|.++++++++|+| +++..++.+ +.|||+++|+ .++.||+++++.+.+.|.++||+|||+|++|+||+
T Consensus 343 ~~vG~~~~~~~~~i~d-~~~~~~~~g--~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~ 415 (542)
T PRK06155 343 GSMGRLAPGFEARVVD-EHDQELPDG--EPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGW 415 (542)
T ss_pred CCcCccCCCceEEEEC-CCCCCCCCC--CceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCce
Confidence 7899999999999999 777766654 8999999998 69999999999998889999999999999999984
No 51
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-50 Score=416.58 Aligned_cols=381 Identities=24% Similarity=0.323 Sum_probs=311.4
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..+.+.|++.|+.+|+++|+++. + +.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la 72 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIITE----E-----EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFA 72 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC----C-----ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 46789999999999999999864 2 589999999999999999985 7999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|+++.++.+++..+++.++++++++++.....+.+.... .....++.+. ++
T Consensus 73 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~------------------~~ 132 (496)
T PRK06839 73 IAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKV--SYVQRVISIT------------------SL 132 (496)
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhc--cCcceEEEec------------------ch
Confidence 999999999999999999999999999999999987665544332211 1112232222 12
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
+++.... .........+++++++|||||||.||+|.++|.++..........+ ....+++++..+|++|.+|+
T Consensus 133 ~~~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 205 (496)
T PRK06839 133 KEIEDRK--IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-----DLTMHDRSIVLLPLFHIGGI 205 (496)
T ss_pred HhhhccC--CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-----CCCCCCeEEEeeCCcchhhH
Confidence 2222211 1122344568899999999999999999999999877666554444 67789999999999999998
Q ss_pred HH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 282 ~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
.. .+.++..|+++++.+. ++..+++.++++++|++.++|.+++.++....
T Consensus 206 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------------------------- 257 (496)
T PRK06839 206 GLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSK---------------------------- 257 (496)
T ss_pred HHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc----------------------------
Confidence 75 5678999999988764 99999999999999999999999999865210
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCC-Cccccccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD-VFNMIGTV 438 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~s~ 438 (508)
....++ +++|.+++||+++++++.+.+++. |.++.+.||+||++..+...... .....+++
T Consensus 258 ---------~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 319 (496)
T PRK06839 258 ---------FETTNL--------QSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSI 319 (496)
T ss_pred ---------cccCCC--------cccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCC
Confidence 001111 389999999999999999999987 99999999999998765544332 23344899
Q ss_pred ccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 439 G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
|+|+++++++|+| +++..++ .|+.|||+|+|+.++.||+++++.+...+.+|||+|||+|++|++|+
T Consensus 320 G~p~~~~~~~i~d-~~~~~~~--~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 386 (496)
T PRK06839 320 GKPVLFCDYELID-ENKNKVE--VGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDEDGF 386 (496)
T ss_pred cccCCCceEEEEC-CCcCCCC--CCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcCCCc
Confidence 9999999999999 8887654 45899999999999999999999998888999999999999999985
No 52
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.4e-50 Score=415.95 Aligned_cols=402 Identities=20% Similarity=0.296 Sum_probs=317.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|++.++.+|+++++.+. . .+.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 9 ~~~~~~~l~~~~~~~~~~~~~~~~---~--~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la 83 (539)
T PRK07008 9 PLLISSLIAHAARHAGDTEIVSRR---V--EGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYG 83 (539)
T ss_pred CCCHHHHHHHHHhhCCCceEEEee---c--cCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 357899999999999999888654 1 12346799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|++|..+.+++..+++.+++++++++......+.+... ....++.++.+.+..... .......++
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 157 (539)
T PRK07008 84 VSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAP-QCPNVKGWVAMTDAAHLP-----AGSTPLLCY 157 (539)
T ss_pred HHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHh-hCCCceEEEEEccCCccc-----cCCcccccH
Confidence 99999999999999999999999999999999999876655443322 223444555444322110 011234567
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHh--hhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS--VDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
+++..............++++++++|||||||.||+|.+||.+++..... ....+ .+..+|++++..|++|..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~ 232 (539)
T PRK07008 158 ETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-----GLSARDAVLPVVPMFHVN 232 (539)
T ss_pred HHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-----CCCCCceEEecCchHHhh
Confidence 77654432222233456788999999999999999999999998754322 21222 667889999999999998
Q ss_pred HHHHHHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 280 DQIIETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
++...+.++..|+++++.+ +++..+++.++++++|++.++|.++..+++.....
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~------------------------ 288 (539)
T PRK07008 233 AWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA------------------------ 288 (539)
T ss_pred hHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc------------------------
Confidence 8877788899999999875 38999999999999999999999999886522110
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC------
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV------ 431 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~------ 431 (508)
..++ +++|.++++|+++++++.+++.+.++..+++.||+||++..++......
T Consensus 289 -------------~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~ 347 (539)
T PRK07008 289 -------------GLRF--------STLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLP 347 (539)
T ss_pred -------------CCCc--------ccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCC
Confidence 0111 3899999999999999999999989999999999999987655432110
Q ss_pred ----cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCC
Q 010535 432 ----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPME 507 (508)
Q Consensus 432 ----~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G 507 (508)
.....++|+|+|+++++|+| +++..++.+.++.|||+++|+.++.||+++++ ..+.+|||+|||+|++|+||
T Consensus 348 ~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~dg 423 (539)
T PRK07008 348 LDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPLVDGWFPTGDVATIDADG 423 (539)
T ss_pred chhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCChh---hhhcCCCcccCceEEEcCCC
Confidence 11136789999999999999 78877766555689999999999999999883 34568999999999999998
Q ss_pred C
Q 010535 508 L 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 424 ~ 424 (539)
T PRK07008 424 F 424 (539)
T ss_pred c
Confidence 5
No 53
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-50 Score=418.22 Aligned_cols=401 Identities=20% Similarity=0.263 Sum_probs=309.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|++.++++|+++|+++. ++. +.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (534)
T PRK05852 13 DFGPRIADLVEVAATRLPEAPALVVT---ADR----IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVAL 85 (534)
T ss_pred hhcccHHHHHHHHHHhCCCCcEEEec---CCC----CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHH
Confidence 45678999999999999999999875 332 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|+++++++|.++.+++.++++.++++++|++............ ......+.+........ .....
T Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~ 156 (534)
T PRK05852 86 LAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RWWPLTVNVGGDSGPSG------GTLSV 156 (534)
T ss_pred HHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cccceeeeecccccccc------ccccc
Confidence 9999999999999999999999999999999999998653321111110 01111111111100000 00000
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.+..... ............++.++++|||||||.||+|.++|+++...+......+ .+..+|++++.+|++|.+
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~ 230 (534)
T PRK05852 157 HLDAATE-PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-----RLSPRDATVAVMPLYHGH 230 (534)
T ss_pred ccccccC-CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCcceEEEecCcchhH
Confidence 0000000 0000011112246789999999999999999999999999888877666 678899999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhh
Q 010535 280 DQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (508)
Q Consensus 280 g~~~-~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (508)
++.. ++.+++.|++++++. +++..+++.++++++|+++++|.+++.+.+......
T Consensus 231 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------- 289 (534)
T PRK05852 231 GLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP--------------------- 289 (534)
T ss_pred HHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc---------------------
Confidence 9885 677889999988854 378899999999999999999999999865321100
Q ss_pred hccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC----
Q 010535 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV---- 431 (508)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~---- 431 (508)
...++ +++|.++++|+++++++.+++.+.++..+++.||+||++..++....+.
T Consensus 290 --------------~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~ 347 (534)
T PRK05852 290 --------------SGRKP--------AALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQT 347 (534)
T ss_pred --------------ccccC--------CCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccc
Confidence 00001 3899999999999999999999999999999999999987665432211
Q ss_pred cccccccccc--cCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 432 FNMIGTVGVP--MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 432 ~~~~~s~G~p--~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
.....++|.+ .++++++|+| +++..++. |+.|||+|+|+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 348 ~~~~~~~g~~g~~~g~~~~i~d-~~g~~~~~--g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~ 423 (534)
T PRK05852 348 ENPVVSTGLVGRSTGAQIRIVG-SDGLPLPA--GAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGD 423 (534)
T ss_pred cCcccccccCCCCCCCeEEEEC-CCCCCCCC--CCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeCCCc
Confidence 1111234444 7999999999 88876654 4899999999999999999999999999999999999999999985
No 54
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-50 Score=418.14 Aligned_cols=395 Identities=24% Similarity=0.286 Sum_probs=324.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
...+|+.+.+.+++..+|+++|+.+. + +.+||.||.++++++|.+|.+.|+++|++|+++++|++++++++
T Consensus 14 ~~~~n~~~~~~~~a~~~~~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 14 ARRQNWVNQLARHALMQPDAPALRFL---G------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccccCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 34588999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++|+++..+.+++..+++.+++++++++......+... .......+.++...+... ....
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~ 153 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAV-RDIVPLLSTVVVAGGSSD----------DSVL 153 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHh-hhccCccceEEEecCCCc----------cccc
Confidence 99999999999999999999999999999999999988765544222 222234455555443211 1124
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccC-CCCcEEEEecChHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHI 278 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~pl~~~ 278 (508)
.++++...............+++++++|||||||.||+|.++|+++...+......+ .. ..++++++.+|++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~ 228 (542)
T PRK07786 154 GYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-----GADINSDVGFVGVPLFHI 228 (542)
T ss_pred CHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-----CCCCCCceEEEecchHHH
Confidence 566665443222233345567899999999999999999999999998887765554 33 567899999999999
Q ss_pred HHHHHHHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhh
Q 010535 279 YDQIIETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (508)
Q Consensus 279 ~g~~~~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (508)
+|+...+.++..|+++++.+ .++..+++.++++++|.++++|+++..++......
T Consensus 229 ~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~---------------------- 286 (542)
T PRK07786 229 AGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQAR---------------------- 286 (542)
T ss_pred HHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccC----------------------
Confidence 99988889999999999865 38999999999999999999999999986521100
Q ss_pred hccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC-cc
Q 010535 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV-FN 433 (508)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~-~~ 433 (508)
.. ..++|.+++||+++++++.+++++.+ +..+++.||+||++.+.+....+. ..
T Consensus 287 -------------~~-----------~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~ 342 (542)
T PRK07786 287 -------------PR-----------DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIR 342 (542)
T ss_pred -------------cc-----------CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccc
Confidence 00 02689999999999999999999988 789999999999987655433322 23
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
..+++|+|++++.++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|+++++|+
T Consensus 343 ~~~~~G~~~~~~~~~i~d-~~~~~~~~--g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~ 414 (542)
T PRK07786 343 KLGSVGKVIPTVAARVVD-ENMNDVPV--GEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGY 414 (542)
T ss_pred cCCCccccCCCceEEEEC-CCCCCCcC--CCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcCCce
Confidence 347899999999999999 77776654 4899999999999999999999999999999999999999999984
No 55
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-50 Score=428.13 Aligned_cols=396 Identities=19% Similarity=0.171 Sum_probs=303.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCC---CCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDG---KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~---~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
....++.++|+++++.+|+++|+++. +. .++.++.+||+||.++++++|++|.+. +++||+|+++++|+++++
T Consensus 18 ~~~~~l~~~l~~~a~~~~~~~a~~~~---~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~ 93 (631)
T PRK07769 18 PPNTNLVRHVERWAKVRGDKLAYRFL---DFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYL 93 (631)
T ss_pred cccCCHHHHHHHHHHhCCCCeEEEEe---ccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHH
Confidence 34578999999999999999999875 31 223457899999999999999999987 899999999999999999
Q ss_pred HHHHHHHhcCCEEEec-cCCCC--HHHHHHHHHhcCceEEEEcCCChhhHhhcCccCC-CCccEEEEecCCChhhhHHhh
Q 010535 117 IAMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAE 192 (508)
Q Consensus 117 ~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~ 192 (508)
++++||+++|++++|+ ++..+ .+++.++++.++++++|++......+.+...... .....++.++....
T Consensus 94 ~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 166 (631)
T PRK07769 94 IAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPD------- 166 (631)
T ss_pred HHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcccccc-------
Confidence 9999999999999999 55554 6889999999999999998766544432211100 01122332221100
Q ss_pred hcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEe
Q 010535 193 ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (508)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (508)
............++++++|+|||||||.||||+++|+++...+......+ .+..++++++.
T Consensus 167 --------------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~ 227 (631)
T PRK07769 167 --------------EVGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-----EGQEGDRGVSW 227 (631)
T ss_pred --------------ccccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-----CCCCcceEEEe
Confidence 00001111234568999999999999999999999999998887766655 67788999999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEec---C--CHhhHHHHhhhhcC---eEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 273 LPLAHIYDQIIETHCIHKGCSIGFWR---G--DVRYLMEDIQELKP---TMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~v~~~---~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
+|++|.+|+...+.+++.|++++++. + ++..+++.++++++ +++..+|.++..++.... .
T Consensus 228 ~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~--~---------- 295 (631)
T PRK07769 228 LPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARG--L---------- 295 (631)
T ss_pred CCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhc--c----------
Confidence 99999999987777888899988874 2 78899999999886 789999998877643100 0
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc---CC---ceeeecccc
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGLT 418 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~---~~---~l~~~YG~T 418 (508)
........+++ ++|.+++||+++++++.++|.+.+ |. .+++.||+|
T Consensus 296 --------------------~~~~~~~~~l~--------~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~T 347 (631)
T PRK07769 296 --------------------PKDGEPPLDLS--------NVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMA 347 (631)
T ss_pred --------------------chhcccCcchh--------heeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchh
Confidence 00000012233 899999999999999999999987 33 599999999
Q ss_pred CCCcceeeccCCCc--------------------------ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec
Q 010535 419 ESCSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 472 (508)
Q Consensus 419 E~~~~~~~~~~~~~--------------------------~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g 472 (508)
|++..++....... ....++|+|+++.+++|+|.+++..++ .|+.|||+|+|
T Consensus 348 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~--~ge~GEl~v~g 425 (631)
T PRK07769 348 EATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELP--DGQIGEIWLHG 425 (631)
T ss_pred hheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCC--CCCEEEEEecC
Confidence 98876654332110 012479999999999999944555554 45899999999
Q ss_pred CcccccccCCccccccccc------------------CCccccCcEEEEcCCCC
Q 010535 473 NTLFSGYYKRPDLTEEVIV------------------DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 473 ~~v~~gY~~~~~~~~~~~~------------------~gw~~TGDlg~~d~~G~ 508 (508)
++++.||+++++.+.+.|. +|||+|||+|+++ ||+
T Consensus 426 p~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~ 478 (631)
T PRK07769 426 NNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGE 478 (631)
T ss_pred CCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCE
Confidence 9999999999999988884 3899999999995 774
No 56
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-50 Score=419.18 Aligned_cols=394 Identities=21% Similarity=0.270 Sum_probs=314.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...|+.++|.+.++++|+++|+++. + +.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 75 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWG---D------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMF 75 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEEC---C------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999865 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++++++..+.+++.++++.++++.++++........... ........++.+..... ...
T Consensus 76 A~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~ 142 (528)
T PRK07470 76 AAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVR-AASPDLTHVVAIGGARA------------GLD 142 (528)
T ss_pred HHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHH-hhCCcCceEEEeCCCcc------------ccc
Confidence 99999999999999999999999999999999999987654433221 11123334444432211 224
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
++++.... ...........+++++|+|||||||.||+|.++|+++...+......+ .......|+++..+|++|.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~ 219 (528)
T PRK07470 143 YEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL---MPGTTEQDASLVVAPLSHGA 219 (528)
T ss_pred HHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh---ccCCCcccEEEEeccchhHH
Confidence 55554432 122223345678999999999999999999999999876555432222 12456789999999999999
Q ss_pred HHHHHHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 280 DQIIETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
++...+ .++.|++.++.. .++..+++.++++++|++.++|++++.+.+..
T Consensus 220 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------------------------- 272 (528)
T PRK07470 220 GIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHP-------------------------- 272 (528)
T ss_pred HHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCc--------------------------
Confidence 986544 566777776664 28899999999999999999999999875411
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCC------
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD------ 430 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~------ 430 (508)
.....++ +++|.+++||+++++++.+++.+.+|..+++.||+||+++.+......
T Consensus 273 -----------~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 333 (528)
T PRK07470 273 -----------AVDRYDH--------SSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAED 333 (528)
T ss_pred -----------CcCCCCC--------cceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccc
Confidence 0111112 389999999999999999999888899999999999998776543321
Q ss_pred -CcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 431 -VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 431 -~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
.....+++|+|+++++++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 334 ~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~--g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~ 409 (528)
T PRK07470 334 GPDARIGTCGFERTGMEVQIQD-DEGRELPP--GETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGF 409 (528)
T ss_pred cccceeeccCcccCCcEEEEEC-CCCCCCCC--CCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEccCCe
Confidence 122347899999999999999 78776554 4899999999999999999999998888999999999999999985
No 57
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.9e-50 Score=418.93 Aligned_cols=408 Identities=23% Similarity=0.350 Sum_probs=312.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
..++.+.|.++++++|+++|+++. + +.+||.||.++++++|.+|.+. |+++||+|+++++|+++++++++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~l 93 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNL----G-----VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVF 93 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999754 2 4799999999999999999985 99999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCC--ChhhhH---------
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV--SSSQKK--------- 189 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~--------- 189 (508)
||+++|+++++++|..+.+++.++++.++++++++++............ .....++..... ......
T Consensus 94 a~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
T PRK12492 94 GALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPD--TGIEYLIEAKMGDLLPAAKGWLVNTVVDK 171 (562)
T ss_pred HHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhc--cCceEEEeechhhccccccchhccccccc
Confidence 9999999999999999999999999999999999987554433222211 011111111000 000000
Q ss_pred ----HhhhcCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccc---
Q 010535 190 ----EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK--- 261 (508)
Q Consensus 190 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~--- 261 (508)
...........|+++.... .......+...+++++|+|||||||.||+|.++|+++...+......+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~ 251 (562)
T PRK12492 172 VKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQ 251 (562)
T ss_pred ccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccc
Confidence 0000001123455555433 11222334567899999999999999999999999998887766554421100
Q ss_pred -cCCC-CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhc
Q 010535 262 -VCSE-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISS 336 (508)
Q Consensus 262 -~~~~-~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 336 (508)
.... ++++++.+|++|.+++.. .+..+..|..+++.. .++..+++.++++++|++.++|+++..++..
T Consensus 252 ~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~------- 324 (562)
T PRK12492 252 PLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDH------- 324 (562)
T ss_pred ccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhC-------
Confidence 0222 357789999999999875 556677888776654 3889999999999999999999999987641
Q ss_pred CChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeecc
Q 010535 337 GGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYG 416 (508)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 416 (508)
+.....++ +++|.+++||+++++++.+.|++.+++++++.||
T Consensus 325 ------------------------------~~~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG 366 (562)
T PRK12492 325 ------------------------------PGFKDLDF--------SALKLTNSGGTALVKATAERWEQLTGCTIVEGYG 366 (562)
T ss_pred ------------------------------cCcccccc--------cceeEEEeccccCCHHHHHHHHHHhCCceeeccC
Confidence 11111222 2899999999999999999999988999999999
Q ss_pred ccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCcc
Q 010535 417 LTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWF 495 (508)
Q Consensus 417 ~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~ 495 (508)
+||++.+++..........+++|+|+++++++|+| +++..++. |+.|||+|+|+.++.||+++++.+.+.| .+|||
T Consensus 367 ~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~--g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~ 443 (562)
T PRK12492 367 LTETSPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNELPL--GERGELCIKGPQVMKGYWQQPEATAEALDAEGWF 443 (562)
T ss_pred ccccCceeeecCCcccccCCccceecCCCEEEEEC-CCCCCCCC--CCceEEEEeCCccccccccCchhhhhcccCCCce
Confidence 99998877655544333447899999999999999 77766554 5899999999999999999999998888 57999
Q ss_pred ccCcEEEEcCCCC
Q 010535 496 HTGDIGEWQPMEL 508 (508)
Q Consensus 496 ~TGDlg~~d~~G~ 508 (508)
+|||+|++|++|+
T Consensus 444 ~TGD~g~~~~~G~ 456 (562)
T PRK12492 444 KTGDIAVIDPDGF 456 (562)
T ss_pred ecCcEEEECCCCe
Confidence 9999999999984
No 58
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-50 Score=431.85 Aligned_cols=368 Identities=20% Similarity=0.260 Sum_probs=298.2
Q ss_pred CCHHHHHHHHHHh--CCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 43 ESPWQFFCDSAKR--IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 43 ~t~~~~l~~~a~~--~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
.|+.++|.+++++ +||++|+++. ..+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 73 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLL 73 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3788999998886 7999999753 259999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|++|.++.+++.++++.++++++|++......+... .++ .
T Consensus 74 a~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---------~~~---------------------~ 123 (705)
T PRK06060 74 ACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS---------RVA---------------------E 123 (705)
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc---------ccc---------------------h
Confidence 9999999999999999999999999999999999986543322110 000 0
Q ss_pred HHHHHhcC--CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhh-hhhhhccccCCCCcEEEEecChHH
Q 010535 201 WEEFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD-QMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 201 ~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
..++.... ..+....+..++++++++|||||||.||+|.++|+++...+..+. ..+ .+..++++++..|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~ 198 (705)
T PRK06060 124 AAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-----RLTPEDTGLCSARMYF 198 (705)
T ss_pred hhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-----CCCCcceeEEeccchh
Confidence 00111100 011112234568899999999999999999999999988776653 233 6678899999999999
Q ss_pred HHHHH-HHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 278 IYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 278 ~~g~~-~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.+++. .++.++..|+++++.+. ++..++..++++++|+++++|+++..+++....
T Consensus 199 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---------------------- 256 (705)
T PRK06060 199 AYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP---------------------- 256 (705)
T ss_pred hcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc----------------------
Confidence 98875 46788999999998863 788889999999999999999999988642100
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCcc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFN 433 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~ 433 (508)
.++ +++|.+++||+++++++.+++.+.+ +..+++.||+||++..+....... .
T Consensus 257 -----------------~~~--------~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-~ 310 (705)
T PRK06060 257 -----------------DSF--------RSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDE-W 310 (705)
T ss_pred -----------------ccc--------cceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCCC-C
Confidence 011 3899999999999999999999988 589999999999986654433322 2
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
..+++|+|+++++++|+| +++..++. |+.|||+|+|+.++.||+++++.+.. .+|||+|||+|++|+||+
T Consensus 311 ~~~~iG~p~~~~~v~i~d-~~g~~~~~--g~~GEl~i~g~~v~~GY~~~~~~~~~--~~~~~~TGDl~~~~~dG~ 380 (705)
T PRK06060 311 RLGTLGRVLPPYEIRVVA-PDGTTAGP--GVEGDLWVRGPAIAKGYWNRPDSPVA--NEGWLDTRDRVCIDSDGW 380 (705)
T ss_pred CcCcccccCCCcEEEEEC-CCCCCCCC--CCceEEEEccchhhhhhhCCCccccc--CCCcEECCeeEEECCCce
Confidence 347899999999999999 77776554 48999999999999999999886532 478999999999999985
No 59
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-50 Score=425.00 Aligned_cols=405 Identities=19% Similarity=0.204 Sum_probs=306.7
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
+..|+.+.+..+ .+|+++|+++. +. ++..+.+||+||.++++++|++|++.|+++||+|+++++|++++++++|
T Consensus 84 ~~~n~~~~~~~~--~~~~~~Al~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~l 157 (655)
T PRK03584 84 ARLNYAENLLRH--RRDDRPAIIFR---GE-DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAML 157 (655)
T ss_pred CEeeHHHHhhcc--CCCCCeEEEEE---CC-CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 444555555432 58999999986 43 4455789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhHhhcCccCCCCccEEEEecCCChhhhHHh
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEA 191 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 191 (508)
||+++|++++|++|.++.+++.++++.++++++|+++... ..+.+.. .....++.++.+....... .
T Consensus 158 A~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~---~ 233 (655)
T PRK03584 158 ATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELR-AALPSLEHVVVVPYLGPAA---A 233 (655)
T ss_pred HHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEecCCCcc---c
Confidence 9999999999999999999999999999999999987532 1121111 1223444555554321100 0
Q ss_pred hhcCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHH-HHhhhhhhhhccccCCCCcEE
Q 010535 192 EELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDTY 269 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 269 (508)
.........|+++.... ...........+++++|+|||||||.||||+++|++++.+ .......+ .+..+|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~ 308 (655)
T PRK03584 234 AAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-----DLGPGDRF 308 (655)
T ss_pred ccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-----CCCCCCEE
Confidence 00111234566665422 2222334456789999999999999999999999987644 44444444 67889999
Q ss_pred EEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 270 FSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 270 l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
++..++.|..+. ..+.+++.|+++++.++ ++..+++.++++++|++..+|++++.+.+.-
T Consensus 309 ~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------------- 373 (655)
T PRK03584 309 FWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAG-------------- 373 (655)
T ss_pred EEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcC--------------
Confidence 999999987543 45678999999999752 7899999999999999999999998875310
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc--CCceeeeccccCCCc
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGLTESCS 422 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~--~~~l~~~YG~TE~~~ 422 (508)
..+ ....+++ +||.+++||+++++++.+++.+.+ ++.+.+.||+||+++
T Consensus 374 --------------------~~~-~~~~~l~--------sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~ 424 (655)
T PRK03584 374 --------------------LVP-GETHDLS--------ALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICS 424 (655)
T ss_pred --------------------CCc-cccCChh--------heEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhc
Confidence 000 1112233 899999999999999999999987 478999999999876
Q ss_pred ceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecC--cccccccCCccccc--cc-c--cCCcc
Q 010535 423 GCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTE--EV-I--VDGWF 495 (508)
Q Consensus 423 ~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~--~v~~gY~~~~~~~~--~~-~--~~gw~ 495 (508)
.+..........++++|.|++|++++|+| ++|..+ .|+.|||+|+|+ +++.||+++++.+. .. | .+|||
T Consensus 425 ~~~~~~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~---~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~ 500 (655)
T PRK03584 425 CFVGGNPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV---VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVW 500 (655)
T ss_pred ccccCCCCCCcCCCccCCCcCCceeEEEC-CCCCCC---CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEe
Confidence 54433322233448999999999999999 887755 458999999996 78999999987543 11 2 26789
Q ss_pred ccCcEEEEcCCCC
Q 010535 496 HTGDIGEWQPMEL 508 (508)
Q Consensus 496 ~TGDlg~~d~~G~ 508 (508)
+|||+|++|+||+
T Consensus 501 ~TGDl~~~d~dG~ 513 (655)
T PRK03584 501 RHGDWIEITEHGG 513 (655)
T ss_pred ecCCeEEECCCCe
Confidence 9999999999985
No 60
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.5e-50 Score=454.43 Aligned_cols=403 Identities=21% Similarity=0.301 Sum_probs=320.4
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 37 ~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
..+....++.+.+++.++++|+++|+++. ++ +.+||+||.++++++|++|++. +++||+|+++++|+++++
T Consensus 609 ~~~~~~~~l~~~~~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~~-~~~g~~V~i~~~n~~~~~ 679 (1146)
T PRK08633 609 SRKEALPPLAEAWIDTAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKRE-LKDEENVGILLPPSVAGA 679 (1146)
T ss_pred hhcCCCCCHHHHHHHHHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHHh-CCCCCeEEEECCCchHHH
Confidence 34466789999999999999999999864 33 4799999999999999999874 899999999999999999
Q ss_pred HHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc-CCCCccEEEEecCCChhhhHHhhhcC
Q 010535 117 IAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-CCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 117 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
++++||+++|++++|++|..+.+++.+++++++++++++++.....+.+.... .......++..++......
T Consensus 680 ~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 752 (1146)
T PRK08633 680 LANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKIS------- 752 (1146)
T ss_pred HHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccc-------
Confidence 99999999999999999999999999999999999999987655554321100 1122233444332211000
Q ss_pred ceeeeHHHHHhcCCCC------CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEE
Q 010535 196 VSCFSWEEFLQLGTLD------CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (508)
....+++.......+ .......++++++++|||||||.||+|.++|+++...+......+ ....+|++
T Consensus 753 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~ 826 (1146)
T PRK08633 753 -KVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-----NLRNDDVI 826 (1146)
T ss_pred -hhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-----CCCCCCEE
Confidence 001122211111000 001344678999999999999999999999999999888876665 67789999
Q ss_pred EEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHH
Q 010535 270 FSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (508)
Q Consensus 270 l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (508)
++.+|++|.+|+.. .+.+++.|+++++.+. ++..+++.++++++|++.++|++++.+.+.
T Consensus 827 l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----------------- 889 (1146)
T PRK08633 827 LSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRN----------------- 889 (1146)
T ss_pred EEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhc-----------------
Confidence 99999999999985 7788999999988763 899999999999999999999999987641
Q ss_pred HHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceee
Q 010535 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFT 426 (508)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~ 426 (508)
+..++.++ +++|.+++||+++++++.+++++.+|.++++.||+||++++++.
T Consensus 890 --------------------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~ 941 (1146)
T PRK08633 890 --------------------KKLHPLMF--------ASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASV 941 (1146)
T ss_pred --------------------cccCcccC--------CCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEE
Confidence 11111222 38999999999999999999999999999999999999877765
Q ss_pred ccCCC---------cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccC----C
Q 010535 427 SLADV---------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD----G 493 (508)
Q Consensus 427 ~~~~~---------~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~----g 493 (508)
...+. ....+++|+|+|+++++|+|.+++..++ .|+.|||+++|+.++.||+++++.+.+.|.+ |
T Consensus 942 ~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~--~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~ 1019 (1146)
T PRK08633 942 NLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELP--PGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIG 1019 (1146)
T ss_pred ecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCC--CCCceEEEEcCCCccccccCCccchHHHhhcCCCCC
Confidence 43221 1234789999999999999944455444 5599999999999999999999999988876 9
Q ss_pred ccccCcEEEEcCCCC
Q 010535 494 WFHTGDIGEWQPMEL 508 (508)
Q Consensus 494 w~~TGDlg~~d~~G~ 508 (508)
||+|||+|++|+||+
T Consensus 1020 ~~~TGD~~~~~~~g~ 1034 (1146)
T PRK08633 1020 WYVTGDKGHLDEDGF 1034 (1146)
T ss_pred eEECCCEEEEcCCce
Confidence 999999999999985
No 61
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.1e-49 Score=416.92 Aligned_cols=400 Identities=21% Similarity=0.276 Sum_probs=300.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..|+.++|.+.++.+|+++|+++. + ..+||+||.++++++|++|.++|+++||+|+|+++|++++++++||
T Consensus 13 ~~~~~~~l~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la 83 (579)
T PLN03102 13 PLTPITFLKRASECYPNRTSIIYG---K------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFA 83 (579)
T ss_pred cccHHHHHHHHHHhCCCCeEEEEC---C------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 357899999999999999999865 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCC----CCccEEEEecCCChhhhHHhhhcCce
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC----LYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
|+++|++++||+|.++.+++.++++.++++++|+++.....+.+...... .....++.++....... ....
T Consensus 84 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 158 (579)
T PLN03102 84 VPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR-----PSSE 158 (579)
T ss_pred HHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccC-----Cccc
Confidence 99999999999999999999999999999999998876655543322110 01112333332111000 0011
Q ss_pred eeeHHHHHhcCCCC-CC----CCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEe
Q 010535 198 CFSWEEFLQLGTLD-CE----LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (508)
Q Consensus 198 ~~~~~~~~~~~~~~-~~----~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (508)
..+++++....... .. ......+++++|+|||||||.||+|.++|.++.......... ..+...++++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~-----~~~~~~~~~l~~ 233 (579)
T PLN03102 159 ELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIG-----WEMGTCPVYLWT 233 (579)
T ss_pred ccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhh-----cCCCCCCeEEec
Confidence 23455555433111 10 112356889999999999999999999999975544332222 245567789999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHH
Q 010535 273 LPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (508)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (508)
+|++|..++...+.++..|+++++.+. ++..+++.|+++++|++.++|+++..|.+.....
T Consensus 234 ~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------ 295 (579)
T PLN03102 234 LPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLD------------------ 295 (579)
T ss_pred CChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccc------------------
Confidence 999999998877778888988888764 8889999999999999999999999986521100
Q ss_pred HHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC
Q 010535 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV 431 (508)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~ 431 (508)
...+ .+++.+++||+++++.+.+++++ +|..+++.||+||+++.++......
T Consensus 296 -------------------~~~~--------~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~ 347 (579)
T PLN03102 296 -------------------LSPR--------SGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQD 347 (579)
T ss_pred -------------------cCCc--------ccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCcccccccccc
Confidence 0000 25678999999999999999876 5899999999999986544321100
Q ss_pred -------------cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccC
Q 010535 432 -------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTG 498 (508)
Q Consensus 432 -------------~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TG 498 (508)
....+..+.+++++ .+.+.+.+..++.+.++.|||+|+|+.++.||+++++.+.+.|.+|||+||
T Consensus 348 ~~~~~~~~~~~~~~~~~g~~~~~~~~v--~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TG 425 (579)
T PLN03102 348 EWNRLPENQQMELKARQGVSILGLADV--DVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTG 425 (579)
T ss_pred ccccCCcccccccccCCCcccccccce--EEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhccCceecC
Confidence 01123344455544 455523444444433468999999999999999999999999999999999
Q ss_pred cEEEEcCCCC
Q 010535 499 DIGEWQPMEL 508 (508)
Q Consensus 499 Dlg~~d~~G~ 508 (508)
|+|++|+||+
T Consensus 426 Dlg~~d~dG~ 435 (579)
T PLN03102 426 DVGVIHPDGH 435 (579)
T ss_pred ceEEEcCCCe
Confidence 9999999985
No 62
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.7e-50 Score=430.24 Aligned_cols=386 Identities=19% Similarity=0.278 Sum_probs=298.9
Q ss_pred CCCCHHHHHHHHHHhCCC-CcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPN-NQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~-~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
...|+.++|.+.++++|+ ++|+.+. +. +.+||+||.++++++|++|.+. +++||+|+++++|++++++++
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~ 272 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV---NF-----TPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVI 272 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC---CC-----CcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHH
Confidence 457899999999999998 5777532 11 4699999999999999999987 599999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh-cCccCCCCccEEEEecCCChhhhHHhhhcCcee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS-CLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 198 (508)
|||+++|++++|+++.++.+++.++++.++++++|++.+....... ........... +.+++....
T Consensus 273 lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~------------ 339 (718)
T PRK08043 273 FGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRW-VYLEDLKDD------------ 339 (718)
T ss_pred HHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccE-EEhhhhhhh------------
Confidence 9999999999999999999999999999999999998764432100 01111111122 222211000
Q ss_pred eeHHHH----HhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecC
Q 010535 199 FSWEEF----LQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (508)
Q Consensus 199 ~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 274 (508)
..+.+. ..............++++++++|||||||.||||.++|.++...+......+ .+..+|++++.+|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~P 414 (718)
T PRK08043 340 VTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-----DFTPNDRFMSALP 414 (718)
T ss_pred cchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-----CCCccCeEEEcCc
Confidence 000000 0000001111234678999999999999999999999999998887766655 6788999999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHH
Q 010535 275 LAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (508)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (508)
++|.+++.. ++.++..|+++++.+. +...+++.++++++|+++++|+++..+.+.
T Consensus 415 l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------------------- 472 (718)
T PRK08043 415 LFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARF---------------------- 472 (718)
T ss_pred chhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhh----------------------
Confidence 999999875 6789999999998863 677889999999999999999998775431
Q ss_pred HHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC
Q 010535 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV 431 (508)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~ 431 (508)
.+..++ ++||.+++||+++++++.+.+++.+|+.+++.||+||++.+++...+..
T Consensus 473 -----------------~~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~ 527 (718)
T PRK08043 473 -----------------ANPYDF--------ARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMA 527 (718)
T ss_pred -----------------cCcccc--------cceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcc
Confidence 001122 3899999999999999999999999999999999999987766544322
Q ss_pred cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccC--Cccc-------cccc-ccCCccccCcEE
Q 010535 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYK--RPDL-------TEEV-IVDGWFHTGDIG 501 (508)
Q Consensus 432 ~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~--~~~~-------~~~~-~~~gw~~TGDlg 501 (508)
...+++|+|+||++++|+| +++. ++.|||+++|++++.||++ +++. +.+. +.+|||+|||+|
T Consensus 528 -~~~~svG~p~pg~~~~i~d-~~~~------~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg 599 (718)
T PRK08043 528 -AKPGTVGRILPGMDARLLS-VPGI------EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIV 599 (718)
T ss_pred -cCCCCCCCcCCCCeeEEec-CCCC------CCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEE
Confidence 3458999999999999998 5442 2569999999999999998 3442 2222 257999999999
Q ss_pred EEcCCCC
Q 010535 502 EWQPMEL 508 (508)
Q Consensus 502 ~~d~~G~ 508 (508)
++|+||+
T Consensus 600 ~~d~dG~ 606 (718)
T PRK08043 600 RFDEQGF 606 (718)
T ss_pred EEcCCCc
Confidence 9999996
No 63
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-49 Score=410.20 Aligned_cols=384 Identities=22% Similarity=0.302 Sum_probs=310.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+.++.++|.++++.+|+++|+++. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVYR---D------QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFA 71 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEEC---C------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 467899999999999999999875 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|+++..+.+++.++++.+++++++++.+...... . ....+.++..... .+
T Consensus 72 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-~-------~~~~~~~~~~~~~-------------~~ 130 (497)
T PRK06145 72 ASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-L-------ETPKIVIDAAAQA-------------DS 130 (497)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhh-c-------ccceEEecCcccc-------------hh
Confidence 9999999999999999999999999999999999876543221 0 0112222211100 01
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
..+..............++++++++|||||||.||+|.++|.++...+......+ ....+++++...|++|.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~ 205 (497)
T PRK06145 131 RRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-----GLTASERLLVVGPLYHVGAF 205 (497)
T ss_pred HHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCCcEEEEecCchhHhHH
Confidence 1111111111112234678999999999999999999999999987665544444 67888999999999999998
Q ss_pred HH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 282 ~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
.. .+.+++.|+++++.+. ++..+++.++++++|++.++|++++.++...
T Consensus 206 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~----------------------------- 256 (497)
T PRK06145 206 DLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVP----------------------------- 256 (497)
T ss_pred HHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCC-----------------------------
Confidence 74 5678899999988774 9999999999999999999999999886411
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCC-Ccccccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLAD-VFNMIGT 437 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~s 437 (508)
.....++ +++|.+++||+++++++.+++.+.+ +.++++.||+||+++.++..... .....++
T Consensus 257 --------~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 320 (497)
T PRK06145 257 --------DRDRFDL--------DSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGS 320 (497)
T ss_pred --------Ccccccc--------ccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCC
Confidence 0111122 2789999999999999999999988 67899999999998866554332 2223478
Q ss_pred cccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 438 ~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+|+|++++++++.| +++..++. ++.|||+++|+.++.||+++++.+.+.|.++||+|||+|++|+||+
T Consensus 321 ~G~~~~~~~~~i~~-~~~~~~~~--~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~ 388 (497)
T PRK06145 321 TGRALAHVEIRIAD-GAGRWLPP--NMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDEEGF 388 (497)
T ss_pred cccCCCCceEEEEC-CCCCCCCC--CCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcCCCc
Confidence 99999999999999 77765554 4899999999999999999999999999999999999999999985
No 64
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-49 Score=422.04 Aligned_cols=404 Identities=16% Similarity=0.151 Sum_probs=302.9
Q ss_pred CCCCHH-HHHHHHHHhCCCCcceeeeeccCCC--CCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH
Q 010535 41 GLESPW-QFFCDSAKRIPNNQMLGGRKVSDGK--VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (508)
Q Consensus 41 ~~~t~~-~~l~~~a~~~p~~~a~~~~~~~~~~--~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~ 117 (508)
...|+. ++|++++.++|+++|+++. +.. ++.++.+||+||.++++++|++|++.|+++||+|+++++|++++++
T Consensus 172 ~~ln~~~~~l~~~~~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~vi 248 (728)
T PLN03052 172 AVLNVAECCLTPKPSKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVI 248 (728)
T ss_pred CEeEHHHHHHHHHhccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH
Confidence 334444 4566666678999999987 431 3356789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh---------hHhhcCccCCCCccEEEEecCCChhhh
Q 010535 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCCLYLKTIVSFANVSSSQK 188 (508)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~ 188 (508)
++|||+++|++++|++|.++.+++.+++++++++++|+++.... .+.+.. . ..++++........
T Consensus 249 a~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~----~--~~~iv~~~~~~~~~ 322 (728)
T PLN03052 249 IYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK----A--PKAIVLPADGKSVR 322 (728)
T ss_pred HHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc----C--CcEEEEeCCCCccc
Confidence 99999999999999999999999999999999999999875321 111111 1 12333322110000
Q ss_pred HHhhhcCceeeeHHHHHhcCCC-----CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccC
Q 010535 189 KEAEELGVSCFSWEEFLQLGTL-----DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC 263 (508)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~ 263 (508)
. ........|++++..... .........+++++|+|||||||.||||+++|.+++..+......+ .+
T Consensus 323 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-----~l 394 (728)
T PLN03052 323 V---KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-----DI 394 (728)
T ss_pred c---ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-----CC
Confidence 0 000113457776543210 1112223568999999999999999999999999877655544333 67
Q ss_pred CCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhH
Q 010535 264 SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (508)
Q Consensus 264 ~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (508)
..+|++++..|+.|..+....+.+|+.|++++++++ .+..+++.++++++|++.++|++++.+.+.
T Consensus 395 ~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~------------ 462 (728)
T PLN03052 395 RKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNT------------ 462 (728)
T ss_pred CCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhc------------
Confidence 889999999999999998777899999999999875 557899999999999999999999987541
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC-CceeeeccccCC
Q 010535 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTES 420 (508)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~ 420 (508)
...+..+++ +||.+++||++++++...++.+.++ .++.+.||+||+
T Consensus 463 -------------------------~~~~~~dls--------sLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~ 509 (728)
T PLN03052 463 -------------------------NCMAGLDWS--------SIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTEL 509 (728)
T ss_pred -------------------------CCcccCChh--------heeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhh
Confidence 111233444 8999999999999999988888766 589999999999
Q ss_pred CcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCc--ccccccCCccccccccc-----CC
Q 010535 421 CSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNT--LFSGYYKRPDLTEEVIV-----DG 493 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~--v~~gY~~~~~~~~~~~~-----~g 493 (508)
++.+..........++++|.|++|++++|+| ++|..++.+..+.|||+++++. ...+|+++.. ...-|. .|
T Consensus 510 ~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g 587 (728)
T PLN03052 510 GGGFVTGSLLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNG 587 (728)
T ss_pred CcccccCCCCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCC
Confidence 8755443332223448899999999999999 8888776653346999998653 2345666532 222231 23
Q ss_pred --ccccCcEEEEcCCCC
Q 010535 494 --WFHTGDIGEWQPMEL 508 (508)
Q Consensus 494 --w~~TGDlg~~d~~G~ 508 (508)
||+|||+|++|+||+
T Consensus 588 ~~~~~tGDl~~~d~dG~ 604 (728)
T PLN03052 588 KILRRHGDIFERTSGGY 604 (728)
T ss_pred CEEEecCceEEECCCCe
Confidence 999999999999995
No 65
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.1e-49 Score=409.65 Aligned_cols=388 Identities=22% Similarity=0.362 Sum_probs=312.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.+++.+++..++ .+|+++|+.+. ++ +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~---~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la 72 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETP---DG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLA 72 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeC---CC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 368999999999 99999999764 33 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|+++..+.+++..+++.++++++++++.....+...... .....++.++.... ..+
T Consensus 73 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~ 137 (504)
T PRK07514 73 TLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAA--AGAPHVETLDADGT-------------GSL 137 (504)
T ss_pred HHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhc--cCCceEEEecCCCc-------------ccH
Confidence 999999999999999999999999999999999998766554333221 12222333332111 011
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
.+................+++++++|||||||.||+|.++|+++...+......+ ....+|++++.+|++|..++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 212 (504)
T PRK07514 138 LEAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-----RFTPDDVLIHALPIFHTHGL 212 (504)
T ss_pred HHhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCccEEEEecchHHHHHH
Confidence 1111111111222345678999999999999999999999999999888766655 67789999999999999998
Q ss_pred HH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 282 ~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
.. .+.+++.|+++++.+. ++..+++.+ .++|++.++|.++.+++..
T Consensus 213 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~------------------------------ 260 (504)
T PRK07514 213 FVATNVALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQE------------------------------ 260 (504)
T ss_pred HHHHHHHHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcC------------------------------
Confidence 74 6688999999998875 899999998 4799999999999887641
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVG 439 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G 439 (508)
+..+..++ +++|.+++||+++++++.+.+++.++..+++.||+||++........ .....+++|
T Consensus 261 -------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~G 324 (504)
T PRK07514 261 -------PRLTREAA--------AHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYD-GERRAGTVG 324 (504)
T ss_pred -------CCCCcccc--------cceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCcc-ccccCcccc
Confidence 11111112 38999999999999999999999999999999999998765543222 222347899
Q ss_pred cccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 440 VPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 440 ~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
.|+++++++|+|.+++..++ .|+.|||+|+|+.++.||+++++.+.+.| .+|||+|||+|++|++|+
T Consensus 325 ~~~~~~~v~i~d~~~~~~~~--~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~ 392 (504)
T PRK07514 325 FPLPGVSLRVTDPETGAELP--PGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGY 392 (504)
T ss_pred cCCCCcEEEEEECCCCCCCC--CCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCcc
Confidence 99999999999944454444 55899999999999999999999999888 489999999999999884
No 66
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.6e-49 Score=412.66 Aligned_cols=392 Identities=17% Similarity=0.211 Sum_probs=312.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+.++.++|+++++ |+++|+++. + +.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG---E------RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHH
Confidence 4689999999887 999999865 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh----hhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
|+++|++++++.+.....++..+++.++++++++++... ....+.+.......+.++......
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------- 159 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDG------------- 159 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCC-------------
Confidence 999999888777777788899999999999999986531 111122222223334444332210
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHH
Q 010535 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
...+.++...............+++++++|||||||.||+|.++|+++...+......+ .+..++++++.+|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~h 234 (536)
T PRK10946 160 EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----GFTPQTRYLCALPAAH 234 (536)
T ss_pred CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCceEEEecCccc
Confidence 12334444333222223344678999999999999999999999999999988876665 6788999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.+++.. .+.++..|+++++.+. ++..+++.++++++|++.++|.++..++..++.....
T Consensus 235 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~------------------ 296 (536)
T PRK10946 235 NYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSR------------------ 296 (536)
T ss_pred cccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCcc------------------
Confidence 888763 6778999999988764 8899999999999999999999999987543211000
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~ 434 (508)
..+ +++|.+++||+++++++.+.+.+.+|+++++.||+||++.............
T Consensus 297 -----------------~~~--------~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~ 351 (536)
T PRK10946 297 -----------------AQL--------ASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERI 351 (536)
T ss_pred -----------------ccc--------cceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccc
Confidence 001 3899999999999999999999989999999999999654433222122233
Q ss_pred cccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 435 IGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 435 ~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
.+++|+|+ |+..++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 352 ~~~~G~p~~~~~~v~i~d-~~~~~~~~--g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~ 424 (536)
T PRK10946 352 FTTQGRPMSPDDEVWVAD-ADGNPLPQ--GEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGY 424 (536)
T ss_pred cccCCcccCCCceEEEEC-CCCCCCCC--CCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCc
Confidence 47899999 799999999 77766554 5999999999999999999999999888 689999999999999985
No 67
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.8e-49 Score=411.22 Aligned_cols=395 Identities=23% Similarity=0.327 Sum_probs=321.3
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~ 123 (508)
++.++|+..++++|+++|+.+. + +.+||+||.+++.++|++|.+.|+++|++|+++++|+++++++++||+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~ 71 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAA 71 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4788999999999999999875 3 479999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHH
Q 010535 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (508)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (508)
++|++++|+++..+.+++..+++.++++++|++......+...... +.....++.+++...... .......|++
T Consensus 72 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 145 (515)
T TIGR03098 72 LAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPG-CHDLRTLILVGEPAHASE-----GGGESPSWPK 145 (515)
T ss_pred hcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhc-ccccceEEEecCcccccC-----CccccccHHH
Confidence 9999999999999999999999999999999988766554333322 234455555554321110 0112334555
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHH
Q 010535 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (508)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~ 283 (508)
+..... .........+++++++|||||||.||+|.+||.++...+......+ .+..+|++++.+|++|.+++..
T Consensus 146 ~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~~ 219 (515)
T TIGR03098 146 LLALGD-ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-----ENRPDDRLLAVLPLSFDYGFNQ 219 (515)
T ss_pred hhcccc-ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-----CCCcccEEEEECchhhHhHHHH
Confidence 544332 1122334567899999999999999999999999998888776655 6788999999999999999988
Q ss_pred HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCC
Q 010535 284 ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQ 362 (508)
Q Consensus 284 ~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (508)
.+.++..|+++++.+. ++..+++.++++++|++.++|+++..+.+...
T Consensus 220 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------------- 268 (515)
T TIGR03098 220 LTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW------------------------------- 268 (515)
T ss_pred HHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-------------------------------
Confidence 8899999999998875 89999999999999999999999998754100
Q ss_pred CCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCcccccccccc
Q 010535 363 NKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (508)
Q Consensus 363 ~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p 441 (508)
.. .++ .++|.+++||+++++++.+.+++.+ +..+++.||+||++..............+++|+|
T Consensus 269 ---~~----~~~--------~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~ 333 (515)
T TIGR03098 269 ---PE----SAA--------PSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKA 333 (515)
T ss_pred ---CC----CCc--------cceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCccee
Confidence 00 001 3899999999999999999999988 6899999999998765544333333445899999
Q ss_pred cCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc------------CCccccCcEEEEcCCCC
Q 010535 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV------------DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 442 ~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~------------~gw~~TGDlg~~d~~G~ 508 (508)
+++++++|++ +++..++ .++.|||+++|+.++.||+++++.+.+.|. ++||+|||+|++|+||+
T Consensus 334 ~~~~~~~i~~-~~~~~~~--~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 409 (515)
T TIGR03098 334 IPNAEVLVLR-EDGSECA--PGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGF 409 (515)
T ss_pred cCCCEEEEEC-CCCCCCC--CCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCce
Confidence 9999999999 7776654 458999999999999999999988766552 34899999999999985
No 68
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4e-50 Score=460.01 Aligned_cols=403 Identities=17% Similarity=0.125 Sum_probs=309.9
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCC---CCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGK---VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~---~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~ 118 (508)
..++.++|+++++++|+++|+++. ... ....+.+||+||.++++++|++|.+.|+++|++|+|+++|+++++++
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~---~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~ 311 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVET---PSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVA 311 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEec---cccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHH
Confidence 468999999999999999999864 211 12336899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh---hhHhhcCccCC---CCccEEEEecCCChhhhHHhh
Q 010535 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---PSILSCLPRCC---LYLKTIVSFANVSSSQKKEAE 192 (508)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~ 192 (508)
++||+++|++++||+|.++.+++.++++.++++++|++.... ..+........ ..+..+...++.....
T Consensus 312 ~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 386 (1389)
T TIGR03443 312 VMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVG----- 386 (1389)
T ss_pred HHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccc-----
Confidence 999999999999999999999999999999999999876421 11111111000 0111111111000000
Q ss_pred hcCceeeeHHHHHhcC---CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEE
Q 010535 193 ELGVSCFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (508)
Q Consensus 193 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (508)
........+..... ..........++++++|+|||||||.||||+++|+++...+......+ .+..+|++
T Consensus 387 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~ 459 (1389)
T TIGR03443 387 --GSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-----GLSENDKF 459 (1389)
T ss_pred --cccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEE
Confidence 00000000000000 001112234578999999999999999999999999999988877766 67889999
Q ss_pred EEecChHHHHHHHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHH
Q 010535 270 FSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (508)
Q Consensus 270 l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (508)
++..|++|..++..++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.+.....
T Consensus 460 ~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-------------- 525 (1389)
T TIGR03443 460 TMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT-------------- 525 (1389)
T ss_pred EEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc--------------
Confidence 999999999888888999999999998763 67899999999999999999999988743100
Q ss_pred HHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcce
Q 010535 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGC 424 (508)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~ 424 (508)
.++ +++|.+++||+++++.+.+.+.+.. ++.+++.||+||++..+
T Consensus 526 --------------------------~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 571 (1389)
T TIGR03443 526 --------------------------TPI--------PSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAV 571 (1389)
T ss_pred --------------------------ccC--------CCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeE
Confidence 001 3899999999999999999988765 78999999999998766
Q ss_pred eeccCCC----------cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc---
Q 010535 425 FTSLADV----------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--- 491 (508)
Q Consensus 425 ~~~~~~~----------~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--- 491 (508)
+...... .....++|+|+++++++|+| +++...++..|+.|||+|+|++++.||+++|+.|.+.|.
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~ 650 (1389)
T TIGR03443 572 SYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVN-RNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNW 650 (1389)
T ss_pred EEEEccccccccchhhcccCcCcCCCccCCCEEEEEC-CccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCc
Confidence 6432211 01235789999999999999 655445555679999999999999999999999988872
Q ss_pred --------------------------CCccccCcEEEEcCCCC
Q 010535 492 --------------------------DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 492 --------------------------~gw~~TGDlg~~d~~G~ 508 (508)
+|||+|||+|++|+||+
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~ 693 (1389)
T TIGR03443 651 FVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGN 693 (1389)
T ss_pred ccCcccccccccccccccccccCCCccceeecCCceeEcCCCC
Confidence 57999999999999985
No 69
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.5e-50 Score=420.68 Aligned_cols=392 Identities=18% Similarity=0.199 Sum_probs=297.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCC---CCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGK---VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~---~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~ 117 (508)
...|+.++++++++++|+++|+++. +.. ++.++.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYL---DHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEE---ccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHH
Confidence 3478999999999999999999875 321 23456899999999999999999987 9999999999999999999
Q ss_pred HHHHHHhcCCEEEec-cCCCC--HHHHHHHHHhcCceEEEEcCCChhhHhhcCccCC-CCccEEEEecCCChhhhHHhhh
Q 010535 118 AMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEE 193 (508)
Q Consensus 118 ~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 193 (508)
+++||+++|++++|+ ++.++ .+++.++++.++++++|+++.....+........ .....++.++....
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------- 179 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD-------- 179 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc--------
Confidence 999999999999999 57776 7899999999999999998766554432211110 01123333322110
Q ss_pred cCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhcccc-CCCCcEEEEe
Q 010535 194 LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV-CSEEDTYFSF 272 (508)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 272 (508)
............++++++|+|||||||.||||.++|+++..++......+ . +..++++++.
T Consensus 180 -------------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~l~~ 241 (612)
T PRK12476 180 -------------SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-----DLLDRNTHGVSW 241 (612)
T ss_pred -------------cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-----ccCCCCceEEEe
Confidence 00001111234568999999999999999999999999988776655444 4 5678999999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEec---C--CHhhHHHHhh--hhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHH
Q 010535 273 LPLAHIYDQIIETHCIHKGCSIGFWR---G--DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (508)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~v~~~---~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (508)
+|++|.+|+...+.+++.|+..++.. + ++..+++.++ +++++.++.+|+++..++.....
T Consensus 242 ~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~------------- 308 (612)
T PRK12476 242 LPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGL------------- 308 (612)
T ss_pred CCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcC-------------
Confidence 99999999986665555566555543 2 7889999995 58999999999998887542000
Q ss_pred HHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc---CC---ceeeeccccC
Q 010535 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGLTE 419 (508)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~---~~---~l~~~YG~TE 419 (508)
......++++ ++| +++||+++++++.+++.+.+ |+ .+++.||+||
T Consensus 309 --------------------~~~~~~~~l~--------~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE 359 (612)
T PRK12476 309 --------------------PAEGDDIDLS--------NVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAE 359 (612)
T ss_pred --------------------hhhhcCcchh--------Hhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhh
Confidence 0000112233 789 99999999999999999877 44 4999999999
Q ss_pred CCcceeeccCCCc--------------------------ccccccccccCCeEEEEeecCC-CCccCCCCCCCceEEEec
Q 010535 420 SCSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRG 472 (508)
Q Consensus 420 ~~~~~~~~~~~~~--------------------------~~~~s~G~p~~~~~~~i~d~~~-~~~~~~~~~~~GEl~v~g 472 (508)
++..++....+.. ...+++|+|+|+++++|+| ++ +..++. |+.|||+++|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd-~~~g~~~~~--g~~GEl~v~g 436 (612)
T PRK12476 360 ATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVD-PDTGAELPD--GEVGEIWLHG 436 (612)
T ss_pred hheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEe-CCCCcCCCC--CCEEEEEEcC
Confidence 8765543222110 0125889999999999999 66 766654 4899999999
Q ss_pred CcccccccCCccccccccc-------------------CCccccCcEEEEcCCCC
Q 010535 473 NTLFSGYYKRPDLTEEVIV-------------------DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 473 ~~v~~gY~~~~~~~~~~~~-------------------~gw~~TGDlg~~d~~G~ 508 (508)
++++.||+++++.+.+.|. ++||+|||+|+++ ||+
T Consensus 437 ~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~ 490 (612)
T PRK12476 437 DNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGE 490 (612)
T ss_pred CcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCE
Confidence 9999999999999988873 2599999999985 774
No 70
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-49 Score=411.66 Aligned_cols=392 Identities=21% Similarity=0.261 Sum_probs=315.1
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...|+.++|.++++++|+++|+++. + +.+||.||.++++++|..|.+.|+++|++|+++++|+++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~l 80 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLG---D------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIG 80 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEEC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3468999999999999999999875 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC-ChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN-KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
||+++|+++++++|..+.+++..+++.++++.+++++. ........ ......+..++.+...... .
T Consensus 81 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------~ 147 (524)
T PRK06188 81 AAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALAL-LARVPSLKHVLTLGPVPDG------------V 147 (524)
T ss_pred HHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHH-hhhcCCceEEEEeCCccch------------h
Confidence 99999999999999999999999999999999999876 33322221 1122333444444332110 0
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.+.+...............++++++++|||||||.||+|.++|.++...+......+ ....++++++.+|++|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~ 222 (524)
T PRK06188 148 DLLAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-----EWPADPRFLMCTPLSHAG 222 (524)
T ss_pred hHHHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCcEEEEecCchhhh
Confidence 011111111001111122345699999999999999999999999999888877665 778899999999999988
Q ss_pred HHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
++. .+.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++...
T Consensus 223 g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--------------------------- 274 (524)
T PRK06188 223 GAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPD--------------------------- 274 (524)
T ss_pred hHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcC---------------------------
Confidence 874 5677899999999875 89999999999999999999999998865210
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC-----cc
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-----FN 433 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-----~~ 433 (508)
....++ +++|.+++||++++++..+.+.+.++..+++.||+||++..+....... ..
T Consensus 275 ----------~~~~~l--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 336 (524)
T PRK06188 275 ----------LRTRDL--------SSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPK 336 (524)
T ss_pred ----------ccCCCC--------cceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhccccccc
Confidence 011112 3899999999999999999988888999999999999976665443321 22
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
..+++|+|+|+++++|+| +++..++. |+.|||+++|+.++.||+++++.+...|.+|||+|||+|++|+||+
T Consensus 337 ~~~~~G~p~~g~~v~i~~-~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 408 (524)
T PRK06188 337 RLTSCGRPTPGLRVALLD-EDGREVAQ--GEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDEDGF 408 (524)
T ss_pred cCCccccccCCcEEEEEc-CCCCCCCC--CCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcCCcc
Confidence 347899999999999999 77766554 5899999999999999999999998888999999999999999985
No 71
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.9e-49 Score=412.71 Aligned_cols=399 Identities=24% Similarity=0.390 Sum_probs=317.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|.+.++++|+++|+++. ++. +.+||+||.++++++|..|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~ 85 (559)
T PRK08315 13 LLEQTIGQLLDRTAARYPDREALVYR---DQG----LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQ 85 (559)
T ss_pred hhhccHHHHHHHHHHHCCCCeEEEEc---CCC----eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 34468999999999999999999876 443 57999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh-----hHhhcCc------------cCCCCccEEEEecC
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP------------RCCLYLKTIVSFAN 182 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~------------~~~~~~~~~i~~~~ 182 (508)
+||+++|++++|++|..+.+++..+++.++++++|+++.... .+.+... ...+..+.++.++.
T Consensus 86 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (559)
T PRK08315 86 FATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD 165 (559)
T ss_pred HHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc
Confidence 999999999999999999999999999999999999875421 1111110 00122333443332
Q ss_pred CChhhhHHhhhcCceeeeHHHHHhcCC------CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhh
Q 010535 183 VSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (508)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~ 256 (508)
... .....++++..... ..........+++++++|||||||.||+|.++|.++...+..+...+
T Consensus 166 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~ 235 (559)
T PRK08315 166 EKH----------PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM 235 (559)
T ss_pred cCC----------cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc
Confidence 110 11234444443221 01112234568899999999999999999999999998888877666
Q ss_pred hhccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHh
Q 010535 257 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (508)
Q Consensus 257 ~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 333 (508)
.+..+++++..+|++|.+++.. .+.++..|+++++.. .++..+++.++++++|+++++|.++..++....
T Consensus 236 -----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~-- 308 (559)
T PRK08315 236 -----KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPD-- 308 (559)
T ss_pred -----CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcc--
Confidence 7788999999999999999875 678999999998654 389999999999999999999999987754110
Q ss_pred hhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC-cee
Q 010535 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLT 412 (508)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~-~l~ 412 (508)
.+..++ +++|.+++||+++++++.+.+.+.++. .++
T Consensus 309 -----------------------------------~~~~~~--------~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~ 345 (559)
T PRK08315 309 -----------------------------------FARFDL--------SSLRTGIMAGSPCPIEVMKRVIDKMHMSEVT 345 (559)
T ss_pred -----------------------------------cCCCCc--------hhhheeEecCCCCCHHHHHHHHHHcCCccee
Confidence 011112 278999999999999999999988876 499
Q ss_pred eeccccCCCcceeeccCCC--cccccccccccCCeEEEEeecCC-CCccCCCCCCCceEEEecCcccccccCCccccccc
Q 010535 413 QGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 489 (508)
Q Consensus 413 ~~YG~TE~~~~~~~~~~~~--~~~~~s~G~p~~~~~~~i~d~~~-~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~ 489 (508)
+.||+||++.+++...... .....++|+|+|+++++|+| ++ +..++ .|+.|||+|+|+.++.||+++++.+...
T Consensus 346 ~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~~~~~--~g~~GEl~v~g~~~~~gy~~~~~~~~~~ 422 (559)
T PRK08315 346 IAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVD-PETGETVP--RGEQGELCTRGYSVMKGYWNDPEKTAEA 422 (559)
T ss_pred EEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEc-CccCCcCC--CCCceEEEEECchhhhhhcCChhHHhhc
Confidence 9999999987666543322 23347899999999999999 66 76555 4589999999999999999999988888
Q ss_pred c-cCCccccCcEEEEcCCCC
Q 010535 490 I-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 490 ~-~~gw~~TGDlg~~d~~G~ 508 (508)
| .++||+|||+|++|+||+
T Consensus 423 ~~~~~~~~TGD~~~~~~dg~ 442 (559)
T PRK08315 423 IDADGWMHTGDLAVMDEEGY 442 (559)
T ss_pred CCCCCCEEccceEEEcCCce
Confidence 8 789999999999999884
No 72
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.8e-49 Score=418.31 Aligned_cols=406 Identities=17% Similarity=0.166 Sum_probs=300.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
.+..|+.+.+.. +.++++|+++. +. ++..+.+||+||.+++.++|++|+++|+++||+|+++++|++++++++
T Consensus 84 ~~~~n~~~~~~~---~~~~~~a~~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~ 156 (652)
T TIGR01217 84 GARLNYAENLLR---AAGTEPALLYV---DE-THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAM 156 (652)
T ss_pred CCeeeHHHHHhc---cCCCCeEEEEE---CC-CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 344555555543 35789999886 33 344578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhHhhcCccCCCCccEEEEecCCChhhhHH
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKE 190 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 190 (508)
|||+++|++++|+++.++.+++.+++++++++++|+++... ..+.++.. ..+.++.++.+..........
T Consensus 157 lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~ 235 (652)
T TIGR01217 157 LATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRK-ELPTLRAVVHIPYLGPRETEA 235 (652)
T ss_pred HHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHh-cCCCccEEEEEeCCCCccccc
Confidence 99999999999999999999999999999999999987532 22222221 223445555554221100000
Q ss_pred hhhcCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHH-HHhhhhhhhhccccCCCCcE
Q 010535 191 AEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDT 268 (508)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (508)
. .......|+++.... ...........+++++|+|||||||.||||+++|++++.+ .......+ ++.++|+
T Consensus 236 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~ 308 (652)
T TIGR01217 236 P--KIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-----DLGPGDR 308 (652)
T ss_pred c--cccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-----CCCCCcE
Confidence 0 001234567766542 1122233456689999999999999999999999986543 33333333 6788999
Q ss_pred EEEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHH
Q 010535 269 YFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKK 343 (508)
Q Consensus 269 ~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 343 (508)
+++..|+.|..+ ..++.+|+.|++++++++ ++..+++.++++++|++..+|.+++.+.+.
T Consensus 309 ~~~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~-------------- 373 (652)
T TIGR01217 309 LFYYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKA-------------- 373 (652)
T ss_pred EEEeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhc--------------
Confidence 999999999754 335579999999999853 678999999999999997777766655320
Q ss_pred HHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC--CceeeeccccCCC
Q 010535 344 LFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG--APLTQGYGLTESC 421 (508)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~--~~l~~~YG~TE~~ 421 (508)
. ..+ ....+++ +||.+++||+++++++.+++.+.++ ..+.+.||+||++
T Consensus 374 -------------------~-~~~-~~~~~l~--------sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~ 424 (652)
T TIGR01217 374 -------------------G-VHP-ARTHDLS--------ALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDIC 424 (652)
T ss_pred -------------------C-CCc-cccCChh--------heeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHh
Confidence 0 000 1122333 8999999999999999999998875 4677899999975
Q ss_pred cceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecC--cccccccCCccccc---ccc--cCCc
Q 010535 422 SGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTE---EVI--VDGW 494 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~--~v~~gY~~~~~~~~---~~~--~~gw 494 (508)
+.............+++|.|.+|++++|+| ++|..+ .|+.|||+++|| .++.|||++++.+. ..| .+||
T Consensus 425 ~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~---~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~ 500 (652)
T TIGR01217 425 SCFAGANPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV---TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGV 500 (652)
T ss_pred ccccCCCCCCCCcCCccCCCcCCCceEEEC-CCCCCC---CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCE
Confidence 444332222222348899999999999999 888765 358999999996 68999999998653 222 2689
Q ss_pred cccCcEEEEcCCCC
Q 010535 495 FHTGDIGEWQPMEL 508 (508)
Q Consensus 495 ~~TGDlg~~d~~G~ 508 (508)
|+|||+|++|+||+
T Consensus 501 ~~tGDlg~~d~dG~ 514 (652)
T TIGR01217 501 WRHGDWITLTPRGG 514 (652)
T ss_pred EEcCCcEEECCCCc
Confidence 99999999999996
No 73
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-49 Score=411.21 Aligned_cols=410 Identities=22% Similarity=0.339 Sum_probs=314.6
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+...++.++|.+.++++|+++|+++. + ..+||.||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~ 90 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAI 90 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 45578999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhh-H---------
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-K--------- 189 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~--------- 189 (508)
+||+++|++++|++|..+.+++.++++.++++++|+++.....+...... .....++.......... .
T Consensus 91 la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (557)
T PRK07059 91 AAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK--TAVKHVVVASMGDLLGFKGHIVNFVVRR 168 (557)
T ss_pred HHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc--cCCceeEEeccccccccccccccccccc
Confidence 99999999999999999999999999999999999987665444332221 12222222211000000 0
Q ss_pred Hh----hhcCceeeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccc-c-
Q 010535 190 EA----EELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK-V- 262 (508)
Q Consensus 190 ~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~-~- 262 (508)
.. .........++++..... .........++++++++|||||||.||+|.++|.+++.++......+..... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 248 (557)
T PRK07059 169 VKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKP 248 (557)
T ss_pred ccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccC
Confidence 00 000011234555554331 1222334567899999999999999999999999998776544332211000 1
Q ss_pred CCCCcEEEEecChHHHHHHH-HHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCCh
Q 010535 263 CSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (508)
Q Consensus 263 ~~~~~~~l~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (508)
......+++.+|++|.+++. ..+.++..|++.++.+. ++..+++.++++++|.+.++|.++..+.+.
T Consensus 249 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------- 318 (557)
T PRK07059 249 RPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNN---------- 318 (557)
T ss_pred CCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcC----------
Confidence 11345778899999998876 45677888888776653 889999999999999999999999988641
Q ss_pred hHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccC
Q 010535 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTE 419 (508)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE 419 (508)
......+++ ++|.++.||+++++.+.++|.+.++.++++.||+||
T Consensus 319 ---------------------------~~~~~~~~~--------~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 363 (557)
T PRK07059 319 ---------------------------PDFDKLDFS--------KLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSE 363 (557)
T ss_pred ---------------------------cCcCcCCch--------hheEEEeccccCCHHHHHHHHHHhCCCeeecccccc
Confidence 111112222 789999999999999999999988999999999999
Q ss_pred CCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccC
Q 010535 420 SCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTG 498 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TG 498 (508)
++.+++..........+++|+|+++++++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.| .+|||+||
T Consensus 364 ~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~--g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TG 440 (557)
T PRK07059 364 TSPVATCNPVDATEFSGTIGLPLPSTEVSIRD-DDGNDLPL--GEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTG 440 (557)
T ss_pred ccchhhcCCCCCCCcCCcccCccCCcEEEEEC-CCCCCCCC--CCceEEEEeCCccchhhhcCHHHHhhhcccCCceecC
Confidence 98876654433333347999999999999999 77766554 4899999999999999999999988877 68999999
Q ss_pred cEEEEcCCCC
Q 010535 499 DIGEWQPMEL 508 (508)
Q Consensus 499 Dlg~~d~~G~ 508 (508)
|+|++|+||+
T Consensus 441 Dl~~~~~~g~ 450 (557)
T PRK07059 441 DVGVMDERGY 450 (557)
T ss_pred cEEEEcCCCc
Confidence 9999999985
No 74
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.2e-48 Score=406.91 Aligned_cols=409 Identities=23% Similarity=0.356 Sum_probs=312.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
.+.++.++|+++++.+|+++|+.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 89 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFR---D------RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFF 89 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEC---C------cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4568999999999999999999764 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC--hhhHhhcCccCCCCccEEEEecCCCh-hhhHH--hhhcC
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK--IPSILSCLPRCCLYLKTIVSFANVSS-SQKKE--AEELG 195 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~--~~~~~ 195 (508)
||+++|++++|++|..+.+++.++++.++++++|+++.. ...+.+.... ..+..++....... ..... .....
T Consensus 90 a~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (541)
T TIGR03205 90 GALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK--GLLDRLIVCEDDNWGKVGTPQAPIPAD 167 (541)
T ss_pred HHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc--ccceEEEEecccccccccccccccCCC
Confidence 999999999999999999999999999999999998632 1111111111 11233333332110 00000 00011
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhh-ccccCCCCcEEEEecC
Q 010535 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV-TGKVCSEEDTYFSFLP 274 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~p 274 (508)
....+++++..............++++++++|||||||.||+|.++|+++....... ..+.. ........+++++.+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p 246 (541)
T TIGR03205 168 PRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLP 246 (541)
T ss_pred cccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEecc
Confidence 123456666554322222334567899999999999999999999999987654422 11100 0012234578999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHH
Q 010535 275 LAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (508)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (508)
++|.+++.. .+.++..|+++++... ++..+++.++++++|++.++|+++..+++.
T Consensus 247 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----------------------- 303 (541)
T TIGR03205 247 LFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALAND----------------------- 303 (541)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhC-----------------------
Confidence 999998875 6678999999888764 899999999999999999999999887531
Q ss_pred HhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCc
Q 010535 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVF 432 (508)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~ 432 (508)
+.....++ +++|.+++||+++++++.+++.+.++..+++.||+||++..++.......
T Consensus 304 --------------~~~~~~~~--------~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~ 361 (541)
T TIGR03205 304 --------------PSLEKRDL--------SSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGP 361 (541)
T ss_pred --------------ccccccCc--------cccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCC
Confidence 00111112 27899999999999999999998889999999999999877665443333
Q ss_pred ccccccccccCCeEEEEeec-CCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 433 NMIGTVGVPMTTVEARLESV-PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 433 ~~~~s~G~p~~~~~~~i~d~-~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
...+++|+|++++.++|.+. +++..+ ..|+.|||+++|++++.||+++++.+.+.|.++||+|||+|+++++|+
T Consensus 362 ~~~~~~G~~~~~~~~~v~~~d~~~~~~--~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 436 (541)
T TIGR03205 362 DKPGSIGLMLPGIELDVVSLDDPTKVL--PPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGY 436 (541)
T ss_pred CCCCCcceeccCceeEEEecCCCCccC--CCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcCCce
Confidence 33478999999999998752 344444 345899999999999999999999999999899999999999999985
No 75
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=9e-49 Score=405.02 Aligned_cols=392 Identities=20% Similarity=0.237 Sum_probs=316.7
Q ss_pred CCCHHHHHHHH-HHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDS-AKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~-a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
.++..++++++ ++.+||++|+++. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNVVEGRGGKTAFIDD---I------SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHHhcccCCceEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 35677788876 6779999999764 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|+++..+.+++.++++.++++++|++......+.+... ..+....++..+.... ....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~ 141 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALG-KSPHLEHRVVVGRPEA-----------GEVQ 141 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHh-cCCCccEEEEeCCCCc-----------cccc
Confidence 999999999999999999999999999999999999876665543322 1233444444432211 1223
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHh-hhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
+.++.........+....++++++++|||||||.||+|.++|+++...+.. ....+ .+..+|+++..+|++|.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~ 216 (508)
T TIGR02262 142 LAELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-----GIREDDVVFSAAKLFFAY 216 (508)
T ss_pred HHHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-----CCCCCCEEEEcCchHHHH
Confidence 444443332222233455789999999999999999999999999887765 23333 678899999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 280 DQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 280 g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
++.. .+.++..|+++++.+. ++..+++.++++++|.++++|.++..++...
T Consensus 217 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~-------------------------- 270 (508)
T TIGR02262 217 GLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADP-------------------------- 270 (508)
T ss_pred HHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCc--------------------------
Confidence 9864 6678999999988764 7999999999999999999999888764310
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccccc
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIG 436 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~ 436 (508)
...... ..++|.+++||+++++++.+.|.+.+|.++++.||+||++.++.....+.. ..+
T Consensus 271 -----------~~~~~~--------~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~-~~~ 330 (508)
T TIGR02262 271 -----------NLPAED--------QVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDV-RYG 330 (508)
T ss_pred -----------cccccc--------cccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccCC-CCC
Confidence 000000 137999999999999999999999999999999999999876655433322 237
Q ss_pred ccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 437 TVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 437 s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
++|+|+++++++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.|.++||+|||+|+++++|+
T Consensus 331 ~~G~~~~g~~v~i~d-~~~~~~~~--g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 399 (508)
T TIGR02262 331 TSGKPVPGYRLRLVG-DGGQDVAA--GEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRNDDGS 399 (508)
T ss_pred CcCCCCCCcEEEEEC-CCCCCCCC--CCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcCCcc
Confidence 899999999999999 77766654 4899999999999999999999999889999999999999999874
No 76
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-48 Score=409.22 Aligned_cols=398 Identities=24% Similarity=0.396 Sum_probs=315.3
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|.+.++++|+++|+++. +.. +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 16 ~~~~l~~~l~~~~~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~ 88 (558)
T PRK12583 16 LTQTIGDAFDATVARFPDREALVVR---HQA----LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQF 88 (558)
T ss_pred ccCcHHHHHHHHHHHCCCCeEEEec---CCC----cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHH
Confidence 3468999999999999999999875 332 579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh-----hHhhcCc------------cCCCCccEEEEecCC
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP------------RCCLYLKTIVSFANV 183 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~------------~~~~~~~~~i~~~~~ 183 (508)
||+++|++++++++..+.+++..+++.++++++|+++.... .+.+... ...+.+..++.....
T Consensus 89 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (558)
T PRK12583 89 ATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPA 168 (558)
T ss_pred HHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCC
Confidence 99999999999999999999999999999999999764321 1111110 011222333333221
Q ss_pred ChhhhHHhhhcCceeeeHHHHHhcCCC------CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhh
Q 010535 184 SSSQKKEAEELGVSCFSWEEFLQLGTL------DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (508)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~ 257 (508)
.. .....|+++...... .........+++++++|||||||.||+|.++|.++...+......+
T Consensus 169 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~- 237 (558)
T PRK12583 169 PP----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL- 237 (558)
T ss_pred CC----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh-
Confidence 11 112234444332210 0111233568899999999999999999999999998888776665
Q ss_pred hccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhh
Q 010535 258 VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 334 (508)
Q Consensus 258 ~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 334 (508)
++..+|++++.+|++|.+|... .+.++..|+++++.. .++..+++.++++++|++.++|+++..++....
T Consensus 238 ----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~--- 310 (558)
T PRK12583 238 ----GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQ--- 310 (558)
T ss_pred ----CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcccc---
Confidence 6788999999999999999875 677899999988764 389999999999999999999999887653110
Q ss_pred hcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC-Cceee
Q 010535 335 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQ 413 (508)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~-~~l~~ 413 (508)
.+..++ +++|.+++||+++++++.+++.+.++ ..+++
T Consensus 311 ----------------------------------~~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~ 348 (558)
T PRK12583 311 ----------------------------------RGNFDL--------SSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQI 348 (558)
T ss_pred ----------------------------------ccCCCc--------hhheEEEecCCCCCHHHHHHHHHHcCCcceec
Confidence 001112 27999999999999999999988886 47999
Q ss_pred eccccCCCcceeeccCCC--cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-
Q 010535 414 GYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI- 490 (508)
Q Consensus 414 ~YG~TE~~~~~~~~~~~~--~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~- 490 (508)
.||+||++.++....... .....++|+|++++.++|+| +++..++ .|+.|||+++|+.++.||+++++.+.+.|
T Consensus 349 ~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~--~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~ 425 (558)
T PRK12583 349 AYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVD-PDGATVP--RGEIGELCTRGYSVMKGYWNNPEATAESID 425 (558)
T ss_pred cccccccccceeccCcccccccccCCCCccCCCCeEEEEC-CCCCCCC--CCCeeEEEEEeCccchhhcCChHHHHhhcC
Confidence 999999998776544322 22347899999999999999 7765554 45899999999999999999999988877
Q ss_pred cCCccccCcEEEEcCCCC
Q 010535 491 VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 491 ~~gw~~TGDlg~~d~~G~ 508 (508)
.++||+|||+|++|+||+
T Consensus 426 ~~~~~~TGDl~~~~~dg~ 443 (558)
T PRK12583 426 EDGWMHTGDLATMDEQGY 443 (558)
T ss_pred CCCCeeccceEEECCCcc
Confidence 789999999999999985
No 77
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-48 Score=407.24 Aligned_cols=400 Identities=19% Similarity=0.231 Sum_probs=309.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+...++.++|.+.++.+|+++|+++. + +.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 7 ~~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~ 77 (540)
T PRK06164 7 PRADTLASLLDAHARARPDAVALIDE---D------RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLF 77 (540)
T ss_pred cCCCCHHHHHHHHHHhCCCCeEEecC---C------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHH
Confidence 45578999999999999999999854 2 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh-----hHhhcCccCCCCccEEEEecCCChhhhHHhhhc
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 194 (508)
+||+++|++++|+++..+.+++.++++.++++++|++.+... .+..........++.++.++.......
T Consensus 78 la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 151 (540)
T PRK06164 78 LACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATP------ 151 (540)
T ss_pred HHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCC------
Confidence 999999999999999999999999999999999999876421 121112122233445555442111000
Q ss_pred CceeeeHHHHHhcC-CCC---CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEE
Q 010535 195 GVSCFSWEEFLQLG-TLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (508)
Q Consensus 195 ~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (508)
......+.+..... ... ........+++++++|||||||.||+|.++|.++...+..+...+ .+..+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l 226 (540)
T PRK06164 152 APAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-----GYDPGAVLL 226 (540)
T ss_pred CCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 00000111111111 000 011223468899999999999999999999999999988877766 677899999
Q ss_pred EecChHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHH
Q 010535 271 SFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (508)
Q Consensus 271 ~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (508)
+.+|++|.+|+...+.++..|+++++.+. ++..+++.++++++|+++++|+++..+++...
T Consensus 227 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~------------------ 288 (540)
T PRK06164 227 AALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG------------------ 288 (540)
T ss_pred EcCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc------------------
Confidence 99999999999888899999999998874 89999999999999999999999999865300
Q ss_pred HHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeec-CCCCHHHHHHHHHhcCCceeeeccccCCCcceeecc
Q 010535 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA-APLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSL 428 (508)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG-~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~ 428 (508)
...++ ++++.+.++| .+...++.+++... ++.+++.||+||++.+++...
T Consensus 289 --------------------~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~ 339 (540)
T PRK06164 289 --------------------ERADF--------PSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQP 339 (540)
T ss_pred --------------------ccCCC--------cceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccC
Confidence 00111 2778776665 55667777777765 899999999999987766544
Q ss_pred CCC--ccccccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEc
Q 010535 429 ADV--FNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQ 504 (508)
Q Consensus 429 ~~~--~~~~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d 504 (508)
... .....+.|.++ ++++++|+|.+++..+ ..|+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++|
T Consensus 340 ~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~--~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~ 417 (540)
T PRK06164 340 ATDPVSVRIEGGGRPASPEARVRARDPQDGALL--PDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTR 417 (540)
T ss_pred CCCCCcceeccCccccCCCeEEEEecCCCCcCC--CCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEc
Confidence 322 12224568875 8999999994344434 456899999999999999999999999888 68999999999999
Q ss_pred CCCC
Q 010535 505 PMEL 508 (508)
Q Consensus 505 ~~G~ 508 (508)
++|+
T Consensus 418 ~~g~ 421 (540)
T PRK06164 418 GDGQ 421 (540)
T ss_pred CCce
Confidence 9984
No 78
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2e-49 Score=482.85 Aligned_cols=379 Identities=20% Similarity=0.238 Sum_probs=316.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|.++|+++|++|+++++|++++++++
T Consensus 3092 ~~~~~~~~l~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~ 3162 (3956)
T PRK12467 3092 PSERLVHQLIEAQVARTPEAPALVFG---D------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVAL 3162 (3956)
T ss_pred CccccHHHHHHHHHHhCCCcceEeeC---C------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHH
Confidence 34479999999999999999999876 4 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
|||+++|++++||+|.++.+++.++++.++++++|++......+.... ...++.++....
T Consensus 3163 lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~------~~~~~~~~~~~~-------------- 3222 (3956)
T PRK12467 3163 LAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPA------GDTALTLDRLDL-------------- 3222 (3956)
T ss_pred HHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccccc------CCceeeecchhh--------------
Confidence 999999999999999999999999999999999999876544321110 011222211100
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.............++++++++|||||||.||||+++|+++.+.+......+ .+..+|++++++|++|..
T Consensus 3223 ------~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~ 3291 (3956)
T PRK12467 3223 ------NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-----ELDANDRVLLFMSFSFDG 3291 (3956)
T ss_pred ------cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc-----CCCcCCEEEEecCccHhH
Confidence 001111222345678999999999999999999999999999999888777 788999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC---CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 280 DQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
++..++.+|+.|+++++.+. ++..+++.++++++|++.++|++++.+++...
T Consensus 3292 ~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~------------------------- 3346 (3956)
T PRK12467 3292 AQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG------------------------- 3346 (3956)
T ss_pred HHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc-------------------------
Confidence 98889999999999999863 78999999999999999999999998854210
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCc---
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVF--- 432 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~--- 432 (508)
..++ ++||.+++||+++++++.+.|.+.+ +..++|.||+||+++.++.......
T Consensus 3347 --------------~~~~--------~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 3404 (3956)
T PRK12467 3347 --------------GADC--------ASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVC 3404 (3956)
T ss_pred --------------ccCC--------CCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEeccccccc
Confidence 0011 3799999999999999999998876 5789999999999887765433221
Q ss_pred -ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cC-------CccccCcEEEE
Q 010535 433 -NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD-------GWFHTGDIGEW 503 (508)
Q Consensus 433 -~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~-------gw~~TGDlg~~ 503 (508)
....++|+|++|++++|+| +++..+|.| +.|||+|+|+.+++||+|+|+.|.++| .+ +||+|||+|++
T Consensus 3405 ~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G--~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~ 3481 (3956)
T PRK12467 3405 EAPYAPIGRPVAGRSIYVLD-GQLNPVPVG--VAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARY 3481 (3956)
T ss_pred CCCCCCCccccCCCEEEEEC-CCCCCCCCC--CCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhhee
Confidence 1236899999999999999 888777655 999999999999999999999999999 33 37999999999
Q ss_pred cCCCC
Q 010535 504 QPMEL 508 (508)
Q Consensus 504 d~~G~ 508 (508)
++||+
T Consensus 3482 ~~dG~ 3486 (3956)
T PRK12467 3482 RADGV 3486 (3956)
T ss_pred cCCCc
Confidence 99995
No 79
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-48 Score=407.06 Aligned_cols=407 Identities=25% Similarity=0.418 Sum_probs=306.4
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
..+++.++|...+..+|+++|+++. + +.+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFL---G------KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEec---C------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4478999999999999999999875 3 579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCC--hhhhH----Hh---
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS--SSQKK----EA--- 191 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~----~~--- 191 (508)
||+++|++++|++|..+.+++..+++.++++++++++.....+...... .....++...... ..... ..
T Consensus 93 A~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSA--TKIEHVIVTRIADFLPFPKNLLYPFVQKK 170 (563)
T ss_pred HHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchh--hccceeEEeccccccccccccccchhhcc
Confidence 9999999999999999999999999999999999987654433222111 1112222111000 00000 00
Q ss_pred -h------hcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCC
Q 010535 192 -E------ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (508)
Q Consensus 192 -~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~ 264 (508)
. ........|+.+...............+++++++|||||||.||+|.++|+++..........+ .....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~ 247 (563)
T PRK06710 171 QSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL---YNCKE 247 (563)
T ss_pred cccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc---cCCCC
Confidence 0 0000001122221111111111112357899999999999999999999999876544322221 01123
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHH
Q 010535 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (508)
Q Consensus 265 ~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (508)
.++++++.+|++|.+++.. .+.+++.|+++++.+. ++..+++.++++++|++.++|+++..+++.
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------- 314 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNS------------- 314 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcC-------------
Confidence 4568899999999999874 5568889999988764 899999999999999999999999987541
Q ss_pred HHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCc
Q 010535 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCS 422 (508)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~ 422 (508)
+.....+++ ++|.+++||+++++++.+++++.++..+++.||+||++.
T Consensus 315 ------------------------~~~~~~~~~--------~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 362 (563)
T PRK06710 315 ------------------------PLLKEYDIS--------SIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSP 362 (563)
T ss_pred ------------------------CccccCChh--------hhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCcc
Confidence 001111222 789999999999999999999988999999999999987
Q ss_pred ceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEE
Q 010535 423 GCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGE 502 (508)
Q Consensus 423 ~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~ 502 (508)
++..........++++|+|++++.+++++.+++..++ .|+.|||+++|+.++.||+++++.+...|.+|||+|||+|+
T Consensus 363 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~--~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~ 440 (563)
T PRK06710 363 VTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALP--PGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGY 440 (563)
T ss_pred ccccCcccccccCCccCCCCCCCeEEEEECCCCccCC--CCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEE
Confidence 6544333233334789999999999999944444444 45899999999999999999999999888999999999999
Q ss_pred EcCCCC
Q 010535 503 WQPMEL 508 (508)
Q Consensus 503 ~d~~G~ 508 (508)
+|++|+
T Consensus 441 ~~~~g~ 446 (563)
T PRK06710 441 MDEDGF 446 (563)
T ss_pred EcCCCc
Confidence 999984
No 80
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-48 Score=403.56 Aligned_cols=403 Identities=20% Similarity=0.271 Sum_probs=314.4
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
-+.++.++|+++|+++|++++++.. . .+.++.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~~---~--~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~l 82 (542)
T PRK06018 8 WPLLCHRIIDHAARIHGNREVVTRS---V--EGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWY 82 (542)
T ss_pred CCCCHHHHHHHHHHhCCCceEEEee---c--cCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Confidence 3469999999999999999999743 1 1234789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|++|..+.+++..+++.+++++++++......+.+.... ...++.++...+...... ........
T Consensus 83 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~ 157 (542)
T PRK06018 83 GIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADK-LPSVERYVVLTDAAHMPQ----TTLKNAVA 157 (542)
T ss_pred HHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhh-CCCccEEEEecccccccc----cCcccccc
Confidence 9999999999999999999999999999999999998877665443322 234455554433211000 00012335
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHH-HHHH-hhhhhhhhccccCCCCcEEEEecChHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV-AEVL-SVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 278 (508)
+++++..............+++++++|||||||.||+|.+||++.+ .... .....+ .+..+|+++...|++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~h~ 232 (542)
T PRK06018 158 YEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-----GTSAADTMLPVVPLFHA 232 (542)
T ss_pred HHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-----CCCCCCEEEEecCHHHH
Confidence 6666554322222234466789999999999999999999999743 2222 222222 67788999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 279 YDQIIETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 279 ~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+++...+.++..|+++++.. .++..+++.++++++|++.++|++++.+++.....
T Consensus 233 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~----------------------- 289 (542)
T PRK06018 233 NSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKE----------------------- 289 (542)
T ss_pred hhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhccccc-----------------------
Confidence 99887778899999998875 38889999999999999999999999886532110
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC-----
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV----- 431 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~----- 431 (508)
..++ +++|.+++||+++++++.++|++ ++.++++.||+||++.+++......
T Consensus 290 --------------~~~~--------~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 346 (542)
T PRK06018 290 --------------GLKL--------PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKL 346 (542)
T ss_pred --------------CCCc--------ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccC
Confidence 0111 37999999999999999999999 8999999999999987665432111
Q ss_pred -----cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcC
Q 010535 432 -----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQP 505 (508)
Q Consensus 432 -----~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~ 505 (508)
.....++|+|.++++++|+| +++..++.+.+..|||+++|++++.||+++.. ..+ .+|||+|||+|++|+
T Consensus 347 ~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~~---~~~~~~~~~~TGDl~~~~~ 422 (542)
T PRK06018 347 PGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVDG---EILDDDGFFDTGDVATIDA 422 (542)
T ss_pred CchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhhcCcc---cEecCCcEEEcCCEEEEcC
Confidence 01125789999999999999 88887776544689999999999999998432 223 579999999999999
Q ss_pred CCC
Q 010535 506 MEL 508 (508)
Q Consensus 506 ~G~ 508 (508)
+|+
T Consensus 423 ~g~ 425 (542)
T PRK06018 423 YGY 425 (542)
T ss_pred Ccc
Confidence 985
No 81
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=9e-49 Score=447.31 Aligned_cols=379 Identities=20% Similarity=0.279 Sum_probs=313.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|.+.|+++|++|+++++++++++++++|
T Consensus 457 ~~~l~~~~~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la 527 (1296)
T PRK10252 457 ETTLSALVAQQAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHA 527 (1296)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 368999999999999999999875 3 4699999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++||+|..+.+++.++++.+++++++++......+... ..+ .++.+.
T Consensus 528 ~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~-~~~~~~-------------------- 581 (1296)
T PRK10252 528 IVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----PDL-TSLCYN-------------------- 581 (1296)
T ss_pred HHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----CCc-eeeecc--------------------
Confidence 999999999999999999999999999999999987654433111 000 011111
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
...... .........++++++++|||||||.||||+++|+++.+.+......+ .+..+|++++..|++|..++
T Consensus 582 -~~~~~~-~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 654 (1296)
T PRK10252 582 -APLAPQ-GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-----PLTADDVVLQKTPCSFDVSV 654 (1296)
T ss_pred -cccccc-cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEEEeCCcchhhhH
Confidence 000000 01111223578899999999999999999999999999998887776 78899999999999999998
Q ss_pred HHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 282 ~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
..++.+++.|+++++.+. ++..+++.++++++|++.++|++++.+++......
T Consensus 655 ~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~----------------------- 711 (1296)
T PRK10252 655 WEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEG----------------------- 711 (1296)
T ss_pred HHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccc-----------------------
Confidence 888999999999999753 88999999999999999999999998765321100
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC------
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV------ 431 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~------ 431 (508)
.. ..+ .++|.+++||+++++++.+.|.+.++..+++.||+||++..++......
T Consensus 712 ----------~~--~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~ 771 (1296)
T PRK10252 712 ----------AR--QSC--------ASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAV 771 (1296)
T ss_pred ----------cc--ccC--------CCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeeccccccccc
Confidence 00 000 3799999999999999999999988999999999999987666543221
Q ss_pred cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-------CCccccCcEEEEc
Q 010535 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------DGWFHTGDIGEWQ 504 (508)
Q Consensus 432 ~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-------~gw~~TGDlg~~d 504 (508)
.....++|+|+++++++|+| +++..++.| +.|||+|+|+.++.||+++++.+.+.|. ++||+|||+|+++
T Consensus 772 ~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g--~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~ 848 (1296)
T PRK10252 772 RGSSVPIGYPVWNTGLRILD-ARMRPVPPG--VAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWL 848 (1296)
T ss_pred CCCCCCcccccCCCEEEEEC-CCCCCCCCC--CceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEc
Confidence 12236799999999999999 888777655 8999999999999999999999998882 3499999999999
Q ss_pred CCCC
Q 010535 505 PMEL 508 (508)
Q Consensus 505 ~~G~ 508 (508)
+||+
T Consensus 849 ~~G~ 852 (1296)
T PRK10252 849 DDGA 852 (1296)
T ss_pred CCCc
Confidence 9985
No 82
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-48 Score=402.05 Aligned_cols=366 Identities=23% Similarity=0.343 Sum_probs=293.1
Q ss_pred HHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEE
Q 010535 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (508)
Q Consensus 50 ~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~ 129 (508)
+.+++.+|+++|+.+. ... +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 74 (488)
T PRK09088 2 AFHARLQPQRLAAVDL---ALG----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIY 74 (488)
T ss_pred chhhhhCCCceEEEec---CCC----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 4577889999999763 121 579999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcC-
Q 010535 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG- 208 (508)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (508)
+|+++.++.+++..+++.++++++|+++....... . ...++++....
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~---------------------~~~~~~~~~~~~ 122 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------D---------------------VEDLAAFIASAD 122 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------c---------------------ccchhhhhhhcc
Confidence 99999999999999999999999999864322100 0 00111111110
Q ss_pred -CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHH-HHH
Q 010535 209 -TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETH 286 (508)
Q Consensus 209 -~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~ 286 (508)
...........+++++++|||||||.||+|.++|+++...+..+.... ....++++++.+|++|.+++.. ++.
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~ 197 (488)
T PRK09088 123 ALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-----RVDAHSSFLCDAPMFHIIGLITSVRP 197 (488)
T ss_pred ccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEecchHHHHHHHHHHHH
Confidence 001112234567899999999999999999999999988777766544 5678999999999999999885 667
Q ss_pred HHhcCcEEEEecC-CHhhHHHHhh--hhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCC
Q 010535 287 CIHKGCSIGFWRG-DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (508)
Q Consensus 287 ~l~~G~~~v~~~~-~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (508)
++..|+++++.+. .+..++..+. ++++|+++++|++++.+.+.
T Consensus 198 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~---------------------------------- 243 (488)
T PRK09088 198 VLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQ---------------------------------- 243 (488)
T ss_pred HHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhC----------------------------------
Confidence 8889999988764 7888888886 48999999999999887531
Q ss_pred CcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCC--Ccccccccccc
Q 010535 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD--VFNMIGTVGVP 441 (508)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~~s~G~p 441 (508)
+..+..++ +++|.+++||++++.+..+.+.+. |.++++.||+||++++....... .....+++|+|
T Consensus 244 ---~~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~ 311 (488)
T PRK09088 244 ---PGFDAAAL--------RHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIP 311 (488)
T ss_pred ---cCcCcccc--------ccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcccccccCCccccC
Confidence 00111112 279999999999999988888765 89999999999998765432211 12244789999
Q ss_pred cCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 442 ~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
+|+++++|+| +++..++. |+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++|++|+
T Consensus 312 ~~~~~~~i~d-~~~~~~~~--g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 376 (488)
T PRK09088 312 TPTVQTRVVD-DQGNDCPA--GVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGF 376 (488)
T ss_pred CCCcEEEEEC-CCCCCCcC--CCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCc
Confidence 9999999999 77765554 4899999999999999999999988877 589999999999999985
No 83
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.8e-48 Score=406.02 Aligned_cols=407 Identities=23% Similarity=0.366 Sum_probs=313.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~-~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|. +.|+++||+|+++++|+++++++++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF----G-----KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC----C-----ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999864 3 57999999999999999996 6899999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChh----h-------hH
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSS----Q-------KK 189 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~-------~~ 189 (508)
||+++|++++|++|.++.+++.++++.++++++++++.....+....... ....++........ . ..
T Consensus 95 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--PVKQVITTGLGDMLGFPKAALVNFVVKY 172 (560)
T ss_pred HHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--CccEEEEechhhhcccccchhhhhhhhh
Confidence 99999999999999999999999999999999999887665544332221 12233322100000 0 00
Q ss_pred Hh----hhcCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCC
Q 010535 190 EA----EELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (508)
Q Consensus 190 ~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~ 264 (508)
.. .........+++..... ...........+++++++|||||||.||+|.++|.++...+......+... ....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~-~~~~ 251 (560)
T PRK08751 173 VKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGT-GKLE 251 (560)
T ss_pred hhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccc-cccC
Confidence 00 00000112344444332 111223345678999999999999999999999999988777655443111 1123
Q ss_pred C-CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChh
Q 010535 265 E-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (508)
Q Consensus 265 ~-~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 340 (508)
. .+.+++.+|++|.+++.. .+.++..|+++++... ++..+++.++++++|++.++|.++..+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~----------- 320 (560)
T PRK08751 252 EGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNT----------- 320 (560)
T ss_pred CCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcC-----------
Confidence 3 357788899999999864 4556667777666543 889999999999999999999999887541
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCC
Q 010535 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTES 420 (508)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~ 420 (508)
+..+..+++ ++|.+++||+++++.+.+.+++.+|..+++.||+||+
T Consensus 321 --------------------------~~~~~~~l~--------~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 366 (560)
T PRK08751 321 --------------------------PGFDQIDFS--------SLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTET 366 (560)
T ss_pred --------------------------cCcCCcchh--------hheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccC
Confidence 111222333 7899999999999999999999889999999999999
Q ss_pred CcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCc
Q 010535 421 CSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGD 499 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGD 499 (508)
+..++....+.....+++|.|+++++++|+| +++..++. ++.|||+++|+.++.||+++++.+.+.| .+|||+|||
T Consensus 367 ~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD 443 (560)
T PRK08751 367 SPAACINPLTLKEYNGSIGLPIPSTDACIKD-DAGTVLAI--GEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGD 443 (560)
T ss_pred CCceecccccccccCCCcCccCCCceEEEEC-CCCCCCCC--CCceEEEEecCccchhhcCChhhhhhccccCCCccccc
Confidence 8876654433333347899999999999999 77776654 4899999999999999999999988887 679999999
Q ss_pred EEEEcCCCC
Q 010535 500 IGEWQPMEL 508 (508)
Q Consensus 500 lg~~d~~G~ 508 (508)
+|++|++|+
T Consensus 444 ~~~~~~~g~ 452 (560)
T PRK08751 444 IARMDEQGF 452 (560)
T ss_pred eEEEcCCce
Confidence 999999985
No 84
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-48 Score=405.85 Aligned_cols=409 Identities=21% Similarity=0.299 Sum_probs=311.7
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH
Q 010535 38 SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (508)
Q Consensus 38 ~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~ 117 (508)
.+....++.++|+++++.+|+++|+.+. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|++++++
T Consensus 28 ~~~~~~~l~~~l~~~a~~~p~~~al~~~---~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~ 98 (567)
T PRK06178 28 YPHGERPLTEYLRAWARERPQRPAIIFY---G------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHI 98 (567)
T ss_pred CCcCcccHHHHHHHHHHHCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHH
Confidence 3356678999999999999999999875 3 479999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhh--HHhh--h
Q 010535 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK--KEAE--E 193 (508)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~--~ 193 (508)
+++||+++|++++|++|..+..++.++++.++++++++++...+.+.+..... ..+.++.......... .... .
T Consensus 99 ~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~ 176 (567)
T PRK06178 99 VFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--SLRHVIVTSLADVLPAEPTLPLPDS 176 (567)
T ss_pred HHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--CcceEEEeccccccccccccccccc
Confidence 99999999999999999999999999999999999999988776654433221 2333333221110000 0000 0
Q ss_pred ------cCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCc
Q 010535 194 ------LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEED 267 (508)
Q Consensus 194 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (508)
....+..+.+................+++++++|||||||.||+|.++|.++...+....... .....++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~----~~~~~~d 252 (567)
T PRK06178 177 LRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA----VVGGEDS 252 (567)
T ss_pred cccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh----ccCCCCc
Confidence 000111111111111111122335678999999999999999999999999987766543321 2567889
Q ss_pred EEEEecChHHHHHHH-HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHH
Q 010535 268 TYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (508)
Q Consensus 268 ~~l~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (508)
++++.+|++|.+|+. .++.+++.|+++++.+. ++..++..++++++|.+.++|..+..+++..
T Consensus 253 ~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~--------------- 317 (567)
T PRK06178 253 VFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHP--------------- 317 (567)
T ss_pred EEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCC---------------
Confidence 999999999999986 47778999999999875 8999999999999999999999988775410
Q ss_pred HHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEE--eecCCCCHHHHHHHHHhcCCceee-eccccCCCc
Q 010535 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAML--SGAAPLPIHVEEFLRVTSGAPLTQ-GYGLTESCS 422 (508)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~--~gG~~l~~~~~~~~~~~~~~~l~~-~YG~TE~~~ 422 (508)
.....+++ +++.+. .+++.+++++.+.+++.+|..++. .||+||++.
T Consensus 318 ----------------------~~~~~~l~--------~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~ 367 (567)
T PRK06178 318 ----------------------RFAEYDLS--------SLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHT 367 (567)
T ss_pred ----------------------CCCCCCcc--------hheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccc
Confidence 00111122 455543 446899999999999988877765 799999986
Q ss_pred ceeeccCC--C----cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccc
Q 010535 423 GCFTSLAD--V----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFH 496 (508)
Q Consensus 423 ~~~~~~~~--~----~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~ 496 (508)
.+...... . ...++++|+|+||++++|+|.+++..++ .|+.|||+++|++++.||+++++.+.+.|.+|||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~--~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~ 445 (567)
T PRK06178 368 CDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLP--LGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLH 445 (567)
T ss_pred cceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCC--CCCceEEEEECCcccccccCChhhhhhcccCCcee
Confidence 65443211 1 1234679999999999999944455554 45899999999999999999999998888899999
Q ss_pred cCcEEEEcCCCC
Q 010535 497 TGDIGEWQPMEL 508 (508)
Q Consensus 497 TGDlg~~d~~G~ 508 (508)
|||+|++++||+
T Consensus 446 TGDl~~~~~~g~ 457 (567)
T PRK06178 446 TGDIGKIDEQGF 457 (567)
T ss_pred ecceEEEecCCe
Confidence 999999999884
No 85
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=4.3e-48 Score=404.51 Aligned_cols=407 Identities=23% Similarity=0.337 Sum_probs=305.3
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.++.+.+...+..+|+++|+++. . +.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~ 90 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHG---S------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGV 90 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 46889999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc------CCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR------CCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
+++|++++|+++.++.+++.++++.++++++|+++............ .......++.+................
T Consensus 91 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
T PLN02479 91 PMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGK 170 (567)
T ss_pred HhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcccccccccc
Confidence 99999999999999999999999999999999988765443222110 001112334433221100000000011
Q ss_pred eeeeHHHHHhcCCCCCC-CCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh
Q 010535 197 SCFSWEEFLQLGTLDCE-LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 275 (508)
....+++++........ ......++.++++|||||||.||+|.++|.++..........+ .+..++++++.+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~ 245 (567)
T PLN02479 171 GAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-----GMNEGAVYLWTLPM 245 (567)
T ss_pred CcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-----CCCCCCEEEEecch
Confidence 23456666554321111 1122334677899999999999999999999876665544333 56788999999999
Q ss_pred HHHHHHHHHH-HHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 276 AHIYDQIIET-HCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 276 ~~~~g~~~~~-~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
+|.+++...+ ..++.|..+++..+++..+++.++++++|++.++|.+++.+.+.....
T Consensus 246 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------- 304 (567)
T PLN02479 246 FHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSE--------------------- 304 (567)
T ss_pred hhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhc---------------------
Confidence 9999987544 456677776665669999999999999999999999999886521100
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccC-----
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLA----- 429 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~----- 429 (508)
. ..++ ++++.++++|+++++++.+++++. +.++++.||+||+++.++....
T Consensus 305 ------------~---~~~~--------~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~ 360 (567)
T PLN02479 305 ------------T---ILPL--------PRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
T ss_pred ------------c---cccc--------cceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceecccccc
Confidence 0 0011 378999999999999999999876 8999999999998654432210
Q ss_pred ----C-CcccccccccccCCeE-EEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEE
Q 010535 430 ----D-VFNMIGTVGVPMTTVE-ARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEW 503 (508)
Q Consensus 430 ----~-~~~~~~s~G~p~~~~~-~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~ 503 (508)
. ......+.|.+.++++ ++|+|.+++..++.+.++.|||+++|++++.||+++++.+.+.|.+|||+|||+|++
T Consensus 361 ~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~ 440 (567)
T PLN02479 361 SLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVK 440 (567)
T ss_pred ccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCCceecceeEEE
Confidence 0 0111146788888876 888883345545443336899999999999999999999999999999999999999
Q ss_pred cCCCC
Q 010535 504 QPMEL 508 (508)
Q Consensus 504 d~~G~ 508 (508)
|++|+
T Consensus 441 ~~~g~ 445 (567)
T PLN02479 441 HPDGY 445 (567)
T ss_pred cCCcc
Confidence 99985
No 86
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-48 Score=401.52 Aligned_cols=378 Identities=21% Similarity=0.233 Sum_probs=298.5
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.+.|.+.+..+|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 103 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDD---D------GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVF 103 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeC---C------CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999864 3 369999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|+++.++.+++.++++.++++++++++.....+.... ..++.++....
T Consensus 104 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~--------------- 161 (516)
T PRK13383 104 AVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD-------DAVAVIDPATA--------------- 161 (516)
T ss_pred HHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh-------cceEEeccchh---------------
Confidence 99999999999999999999999999999999999887655443211 11222211100
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
.. . .....+...++.++++|||||||.||+|.++|.... .......... ...+..+++++..+|++|.+|
T Consensus 162 --~~--~---~~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~-~~~~~~~~~~--~~~~~~~d~~~~~~pl~h~~g 231 (516)
T PRK13383 162 --GA--E---ESGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRS-AVGVWVTILD--RTRLRTGSRISVAMPMFHGLG 231 (516)
T ss_pred --hh--h---cCCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhh-hhhhHHhHHh--hhccCCCCeEEEecCCcchhh
Confidence 00 0 000111233556789999999999999999997432 1111111111 125678899999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 281 QIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
+...+.++..|+++++... ++..+++.++++++|.+.++|.++..+........
T Consensus 232 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------------- 286 (516)
T PRK13383 232 LGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVR------------------------- 286 (516)
T ss_pred HHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc-------------------------
Confidence 9888888999999988764 89999999999999999999999998864211000
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVG 439 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G 439 (508)
...++ +++|.+++||+++++++.++|.+.++..+++.||+||++..+...........+++|
T Consensus 287 ----------~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G 348 (516)
T PRK13383 287 ----------ARNPL--------PQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVG 348 (516)
T ss_pred ----------ccCCC--------CceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCccc
Confidence 00001 379999999999999999999999999999999999998766544433333457899
Q ss_pred cccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 440 VPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 440 ~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+|+|+++++|+| +++..++ .|+.|||+++|+.++.||++++. +.+.+|||+|||+|++|++|+
T Consensus 349 ~~~~~~~~~i~d-~~~~~~~--~g~~Gel~v~g~~~~~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~ 411 (516)
T PRK13383 349 KPVAGCPVRILD-RNNRPVG--PRVTGRIFVGGELAGTRYTDGGG---KAVVDGMTSTGDMGYLDNAGR 411 (516)
T ss_pred CCCCCcEEEEEC-CCCCCCC--CCCceEEEEecCcccccccCCch---hheecCceecceeEEEcCCcc
Confidence 999999999999 7776554 45899999999999999998754 334689999999999999985
No 87
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-48 Score=400.75 Aligned_cols=378 Identities=17% Similarity=0.183 Sum_probs=295.0
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCcHhHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv-~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.++.++|..++ .|+++|+++. + ..+||.||.++++++|.+|.+.|+ ++||+|+++++|+++++++++|
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~---~------~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA 71 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG---D------RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAA 71 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 57888887754 7999999865 3 479999999999999999999999 8999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++||+|.++.+++.++++.++++++|+++.....+.+.. ....+ ++.++.. .+
T Consensus 72 ~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~-~i~~~~~----------------~~ 131 (540)
T PRK13388 72 AALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD---LPGVR-VLDVDTP----------------AY 131 (540)
T ss_pred HHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc---ccCce-EEEccch----------------hh
Confidence 9999999999999999999999999999999999877655443321 11222 2222211 12
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
.++........+.....++++++++|||||||.||+|.++|.++...+......+ ++..+|+++..+|++|.+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~ 206 (540)
T PRK13388 132 AELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-----GLTRDDVCYVSMPLFHSNAV 206 (540)
T ss_pred hhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-----CCCCCCEEEEeeCchhhcch
Confidence 2222211111112235678999999999999999999999999998887776666 77889999999999999988
Q ss_pred HH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 282 ~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
.. .+.++..|+++++.+. ++..+++.++++++|++..+|..+..++...
T Consensus 207 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~----------------------------- 257 (540)
T PRK13388 207 MAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATP----------------------------- 257 (540)
T ss_pred HHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCC-----------------------------
Confidence 75 4468899999988764 8999999999999999999999988875310
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVG 439 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G 439 (508)
..... . ..+++.+ + |++++++..+.+.+.++.++++.||+||++.++.... ....+++|
T Consensus 258 --------~~~~~-~-------~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~---~~~~~~vG 316 (540)
T PRK13388 258 --------ERPDD-A-------DNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVREP---GTPPGSIG 316 (540)
T ss_pred --------CCccc-c-------ccceEEE-E-CCCCCHHHHHHHHHHhCCceecccccccccceeecCC---CCCCCCCC
Confidence 00000 0 0256643 3 6667888888898888999999999999987665322 12347899
Q ss_pred cccCCeEEE-----------EeecCCCCccCCCCCCCceEEEe-cCcccccccCCcccccccccCCccccCcEEEEcCCC
Q 010535 440 VPMTTVEAR-----------LESVPEMGYDALSSVPRGEICLR-GNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPME 507 (508)
Q Consensus 440 ~p~~~~~~~-----------i~d~~~~~~~~~~~~~~GEl~v~-g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G 507 (508)
+|++++++. ++| ++|.... ..++.|||+++ |+.++.||+++++.+.+.|.+|||+|||+|++|+||
T Consensus 317 ~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~-~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg 394 (540)
T PRK13388 317 RGAPGVAIYNPETLTECAVARFD-AHGALLN-ADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDADG 394 (540)
T ss_pred CCCCCcEEEcCCCCccccceecc-Ccccccc-CCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcCCC
Confidence 999997653 233 3333221 23468999998 999999999999999999989999999999999998
Q ss_pred C
Q 010535 508 L 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 395 ~ 395 (540)
T PRK13388 395 W 395 (540)
T ss_pred c
Confidence 5
No 88
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.9e-48 Score=403.38 Aligned_cols=374 Identities=17% Similarity=0.234 Sum_probs=282.1
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~ 123 (508)
-+.+.|+++++++|+++|+++. ++ +.|+.+||+||.++++++|.+|.++ ++||+|+++++|+++++++++||+
T Consensus 3 ~~~~~l~~~~~~~~~~~a~~~~---~~--~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~ 75 (525)
T PRK05851 3 ELAAALSDAMTASGRDLVVLDR---ES--GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAW 75 (525)
T ss_pred hHHHHHHHHhcCCCCceEEeCC---CC--CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHH
Confidence 3889999999999999999865 32 3578999999999999999999998 799999999999999999999999
Q ss_pred hcCCEEEeccCCC--------CHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcC
Q 010535 124 SQAITYVPLYDTL--------GANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 124 ~~G~~~v~l~~~~--------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
++|++++ ++|.. ..+++..+++.++++++|++......+..... . +.+.+
T Consensus 76 ~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~----~~~~~------------- 133 (525)
T PRK05851 76 LAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS----S----VTVHD------------- 133 (525)
T ss_pred HcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc----c----ccccc-------------
Confidence 9999865 44321 23455667899999999998765444322110 0 00000
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCC-CCcEEEEecC
Q 010535 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS-EEDTYFSFLP 274 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~p 274 (508)
+....... .........++++++|+|||||||.||||+++|+++...+......+ ... .+|++++.+|
T Consensus 134 -----~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~d~~l~~~p 202 (525)
T PRK05851 134 -----LATAAHTN-RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-----GLDAATDVGCSWLP 202 (525)
T ss_pred -----cccccccc-ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCCCCeEEEcCC
Confidence 00000000 00111224568999999999999999999999999999988877666 666 8899999999
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEec---C--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHH
Q 010535 275 LAHIYDQIIETHCIHKGCSIGFWR---G--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (508)
Q Consensus 275 l~~~~g~~~~~~~l~~G~~~v~~~---~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (508)
++|.+++...+.+++.|+++++.+ + ++..+++.++++++|++.. |.++..++......
T Consensus 203 l~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~-p~~~~~~l~~~~~~---------------- 265 (525)
T PRK05851 203 LYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAA-PNFAYNLIGKYARR---------------- 265 (525)
T ss_pred CccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeC-CcHHHHHHHHhhcc----------------
Confidence 999999988888999999999876 2 5778999999999998755 55544433211000
Q ss_pred HHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHh---cCC---ceeeeccccCCCcc
Q 010535 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT---SGA---PLTQGYGLTESCSG 423 (508)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~---~~~---~l~~~YG~TE~~~~ 423 (508)
....+++ ++|.+++||+++++++.++|.+. +|. .+++.||+||++..
T Consensus 266 -------------------~~~~~l~--------~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~ 318 (525)
T PRK05851 266 -------------------VSDVDLG--------ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCA 318 (525)
T ss_pred -------------------ccCCCHH--------HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceE
Confidence 0011122 78999999999999999998874 354 49999999999876
Q ss_pred eeeccCCC--------------cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccc
Q 010535 424 CFTSLADV--------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 489 (508)
Q Consensus 424 ~~~~~~~~--------------~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~ 489 (508)
++...... ....+++|+|+||++++|+| +++.. ++..|+.|||+|+|++++.||+++++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~-~~~~g~~GEl~v~g~~~~~GY~~~~~~~--- 393 (525)
T PRK05851 319 VTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISP-GDGAA-GVAGREIGEIEIRGASMMSGYLGQAPID--- 393 (525)
T ss_pred EEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEEC-CCCCc-cCCCCCeEEEEEecCchhhccccCCccC---
Confidence 65432210 12236899999999999999 66542 2334589999999999999999998653
Q ss_pred ccCCccccCcEEEEcCCCC
Q 010535 490 IVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 490 ~~~gw~~TGDlg~~d~~G~ 508 (508)
.+|||+|||+|++| +|+
T Consensus 394 -~~~~~~TGDl~~~~-~G~ 410 (525)
T PRK05851 394 -PDDWFPTGDLGYLV-DGG 410 (525)
T ss_pred -CCCceeccceEEEE-CCE
Confidence 37899999999997 563
No 89
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-47 Score=398.93 Aligned_cols=406 Identities=20% Similarity=0.305 Sum_probs=311.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
+.++.++|+++++++|+++|+++. + +.+||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 92 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM---G------EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALF 92 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC---C------ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 467999999999999999999864 3 479999999999999999985 899999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhh--hHH--------
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ--KKE-------- 190 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~-------- 190 (508)
||+++|++++|++|..+.+++.++++.+++++++++......+.+.... ...+.++......... ...
T Consensus 93 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (560)
T PRK08974 93 GILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFK--TPVKHVILTRMGDQLSTAKGTLVNFVVKY 170 (560)
T ss_pred HHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhh--cCcceEEEecccccccccccccccchhhh
Confidence 9999999999999999999999999999999999987655444332211 1122222211100000 000
Q ss_pred -----hhhcCceeeeHHHHHhcCCC-CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCC
Q 010535 191 -----AEELGVSCFSWEEFLQLGTL-DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (508)
Q Consensus 191 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~ 264 (508)
..........+.+....... .........+++++++|||||||.||+|.++|.++..++......+.. ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~~ 248 (560)
T PRK08974 171 IKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGP--LLHP 248 (560)
T ss_pred cccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhcc--ccCC
Confidence 00000011222333222211 111223467899999999999999999999999998877654433311 1234
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhH
Q 010535 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (508)
Q Consensus 265 ~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (508)
.++.++..+|++|.+++.. .+.++..|+++++... ++..+++.++++++|++.++|.+++.+....
T Consensus 249 ~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----------- 317 (560)
T PRK08974 249 GKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNE----------- 317 (560)
T ss_pred CccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCc-----------
Confidence 4678888999999999764 5667888988777643 7889999999999999999999999886411
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCC
Q 010535 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESC 421 (508)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~ 421 (508)
.....++ +++|.+++||+++++++.++|++.+|..+++.||+||++
T Consensus 318 --------------------------~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~ 363 (560)
T PRK08974 318 --------------------------EFQELDF--------SSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECS 363 (560)
T ss_pred --------------------------CcccCCc--------cceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccC
Confidence 0011112 279999999999999999999998899999999999998
Q ss_pred cceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEE
Q 010535 422 SGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIG 501 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg 501 (508)
..++....+.....+++|.|+|+++++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|
T Consensus 364 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~--g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~ 440 (560)
T PRK08974 364 PLVSVNPYDLDYYSGSIGLPVPSTEIKLVD-DDGNEVPP--GEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIA 440 (560)
T ss_pred ceeeccCCCCcccCCccccCcCCCEEEEEC-CCCCCCCC--CCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEE
Confidence 877665544333457899999999999999 77766554 489999999999999999999999888889999999999
Q ss_pred EEcCCCC
Q 010535 502 EWQPMEL 508 (508)
Q Consensus 502 ~~d~~G~ 508 (508)
++|++|+
T Consensus 441 ~~~~~g~ 447 (560)
T PRK08974 441 VMDEEGF 447 (560)
T ss_pred EEcCCce
Confidence 9999874
No 90
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-48 Score=479.49 Aligned_cols=380 Identities=20% Similarity=0.259 Sum_probs=313.4
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|.++++++|+++|+++. + +.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++
T Consensus 2001 ~~~~~~~~~~~~a~~~p~~~A~~~~---~------~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~l 2071 (5163)
T PRK12316 2001 RGPGVHQRIAEQAARAPEAIAVVFG---D------QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALL 2071 (5163)
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEcC---C------CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4468999999999999999999876 4 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++||+|.++.+++.++++.+++++++++......+... .... .+.++..
T Consensus 2072 Ail~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~~-~~~~~~~----------------- 2128 (5163)
T PRK12316 2072 AVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----AGVA-RLPLDRD----------------- 2128 (5163)
T ss_pred HHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----cccc-eEeccch-----------------
Confidence 9999999999999999999999999999999999987654432110 0111 1111110
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
..+ .............++++++|+|||||||.||||+++|+++.+.+......+ .+..+++++.+.|++|..+
T Consensus 2129 -~~~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 2201 (5163)
T PRK12316 2129 -AEW-ADYPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-----ELSPADCELQFMSFSFDGA 2201 (5163)
T ss_pred -hhh-hccCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-----CCCCcceEEEecCchHHHH
Confidence 000 000111122345789999999999999999999999999999998887776 7889999999999999988
Q ss_pred HHHHHHHHhcCcEEEEecC---CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 281 QIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
+..++.+|+.|+++++.+. ++..+++.++++++|+++.+|++++.+.+.....
T Consensus 2202 ~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------------------------ 2257 (5163)
T PRK12316 2202 HEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD------------------------ 2257 (5163)
T ss_pred HHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc------------------------
Confidence 8889999999999977653 7899999999999999999999999886521100
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCc-c--
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVF-N-- 433 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~-~-- 433 (508)
....+||.+++||+++++++.+.|.+.+ +..+++.||+||++..++....... .
T Consensus 2258 ----------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 2315 (5163)
T PRK12316 2258 ----------------------GRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCG 2315 (5163)
T ss_pred ----------------------cCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccC
Confidence 0002799999999999999999998866 6789999999999877655433221 1
Q ss_pred -cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc--------CCccccCcEEEEc
Q 010535 434 -MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--------DGWFHTGDIGEWQ 504 (508)
Q Consensus 434 -~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--------~gw~~TGDlg~~d 504 (508)
...++|+|+++++++|+| +++..+|.| +.|||+|+|+++++||+++|+.|.+.|. ++||+|||+|+++
T Consensus 2316 ~~~~~iG~p~~~~~~~i~d-~~~~~vp~g--~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~ 2392 (5163)
T PRK12316 2316 AAYVPIGRALGNRRAYILD-ADLNLLAPG--MAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYR 2392 (5163)
T ss_pred CCcCCcccccCCCEEEEEC-CCCCCCCCC--CeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEc
Confidence 125799999999999999 788766655 8999999999999999999999999982 3599999999999
Q ss_pred CCCC
Q 010535 505 PMEL 508 (508)
Q Consensus 505 ~~G~ 508 (508)
+||+
T Consensus 2393 ~dG~ 2396 (5163)
T PRK12316 2393 ADGV 2396 (5163)
T ss_pred CCCc
Confidence 9985
No 91
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=6.2e-48 Score=469.83 Aligned_cols=381 Identities=20% Similarity=0.215 Sum_probs=314.3
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.++|+++|++|++++++++++++++|
T Consensus 1572 ~~~~~~~~~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~l 1642 (3956)
T PRK12467 1572 LARLVHQLIEDQAAATPEAVALVFG---E------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLL 1642 (3956)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEeC---C------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHH
Confidence 3468999999999999999999875 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++||+|.++.+++.++++.+++++++++......+... ... .++.++...
T Consensus 1643 avlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-----~~~-~~~~~~~~~---------------- 1700 (3956)
T PRK12467 1643 AILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP-----DGL-RSLVLDQED---------------- 1700 (3956)
T ss_pred HhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc-----cCC-cEEEecccc----------------
Confidence 9999999999999999999999999999999999987654332110 111 122222111
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
++..............++++++++|||||||.||||+++|+++...+......+ .+..++++++..|++|..+
T Consensus 1701 --~~~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 1773 (3956)
T PRK12467 1701 --DWLEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-----QLSAADVVLQFTSFAFDVS 1773 (3956)
T ss_pred --chhccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-----CCCcccEEEEecCccHHHH
Confidence 011111111222345678999999999999999999999999999998877766 7788999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+..++.++..|+++++.+. ++..+++.++++++|++.++|++++.|++....
T Consensus 1774 ~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~------------------------ 1829 (3956)
T PRK12467 1774 VWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ------------------------ 1829 (3956)
T ss_pred HHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc------------------------
Confidence 8888999999999999763 789999999999999999999999988642000
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCC----C
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLAD----V 431 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~----~ 431 (508)
..++ ++||.+++||+++++++.+.|.+.+ +..++|.||+||++..++..... .
T Consensus 1830 --------------~~~~--------~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~ 1887 (3956)
T PRK12467 1830 --------------VEHP--------LSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLE 1887 (3956)
T ss_pred --------------cccC--------CCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccc
Confidence 0001 3899999999999999999998876 57899999999998776654322 1
Q ss_pred cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc--------CCccccCcEEEE
Q 010535 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--------DGWFHTGDIGEW 503 (508)
Q Consensus 432 ~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--------~gw~~TGDlg~~ 503 (508)
.....++|+|+++++++|.| +++..+|.| +.|||+|+|+++++||+++|+.|.+.|. ++||+|||+|++
T Consensus 1888 ~~~~~~iG~p~~~~~~~vld-~~~~~vp~G--~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~ 1964 (3956)
T PRK12467 1888 GRDSVPIGQPIANLSTYILD-ASLNPVPIG--VAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARY 1964 (3956)
T ss_pred cCCCCCcccccCCCEEEEEC-CCCCCCCCC--CceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEE
Confidence 12236899999999999999 888777655 8999999999999999999999999882 249999999999
Q ss_pred cCCCC
Q 010535 504 QPMEL 508 (508)
Q Consensus 504 d~~G~ 508 (508)
++||+
T Consensus 1965 ~~dG~ 1969 (3956)
T PRK12467 1965 RADGV 1969 (3956)
T ss_pred CCCCC
Confidence 99985
No 92
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.2e-47 Score=396.31 Aligned_cols=374 Identities=18% Similarity=0.227 Sum_probs=302.7
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~ 123 (508)
++.+.|.+.|+.+|+++|+.+. + +.+||+||.+++.++|..|.+.|+++|++|+++++|+.+++++++||+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~ 71 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ---G------QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSI 71 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 4788999999999999999764 3 479999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHH
Q 010535 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (508)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (508)
++|++++|+++.++.+++..+++..+++.++++........ ... ++.+.. .+.
T Consensus 72 ~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~--------~~~-~~~~~~------------------~~~ 124 (502)
T TIGR01734 72 KSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV--------GTQ-IITLSA------------------LEQ 124 (502)
T ss_pred HhCCEEeCCCCcChHHHHHHHHHhcCCCEEEeccccccccc--------CCc-eEEchH------------------hhh
Confidence 99999999999999999999999999999999876533221 111 111110 111
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHH
Q 010535 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (508)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~ 283 (508)
+...............+++++++|||||||.||+|.++|.++...+......+ ....++++++..|++|..++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~ 199 (502)
T TIGR01734 125 AETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-----PLSEGKQFLNQAPFSFDLSVMD 199 (502)
T ss_pred hhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-----CCCCCceEEeecCceechhHHH
Confidence 11111111112234568899999999999999999999999998888766655 6778899999999999999888
Q ss_pred HHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccC
Q 010535 284 ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (508)
Q Consensus 284 ~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (508)
++.+++.|+++++.+. ++..+++.+++++++.+.++|.+++.++...
T Consensus 200 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~----------------------------- 250 (502)
T TIGR01734 200 LYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDP----------------------------- 250 (502)
T ss_pred HHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcc-----------------------------
Confidence 8899999999998763 7899999999999999999999988764310
Q ss_pred CCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCC----Cccc
Q 010535 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLAD----VFNM 434 (508)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~----~~~~ 434 (508)
..+..++ ++++.++++|+++++++.+++.+.+ +..+++.||+||+++.+...... ....
T Consensus 251 --------~~~~~~~--------~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 314 (502)
T TIGR01734 251 --------NFNQENY--------PHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYP 314 (502)
T ss_pred --------ccccccC--------CcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCC
Confidence 0011111 3789999999999999999999887 78999999999997655433221 1222
Q ss_pred ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc----CCccccCcEEEEcCC
Q 010535 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV----DGWFHTGDIGEWQPM 506 (508)
Q Consensus 435 ~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~----~gw~~TGDlg~~d~~ 506 (508)
..++|++.|+++++|+| +++..++. |+.|||+++|+.++.||+++++.+.+.|. ++||+|||+|++|++
T Consensus 315 ~~~vg~~~~~~~~~i~~-~~~~~~~~--g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~ 387 (502)
T TIGR01734 315 RLPIGFAKPDMNLFIMD-EEGEPLPE--GEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG 387 (502)
T ss_pred ccccccccCCCEEEEEC-CCCCCCCC--CCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC
Confidence 35799999999999999 77766654 48999999999999999999999887762 359999999999975
No 93
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8e-48 Score=475.89 Aligned_cols=379 Identities=20% Similarity=0.249 Sum_probs=314.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++|
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la 580 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLA 580 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 578999999999999999999875 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++||+|.++.+++.++++.++++++|++......+.. .....++.++....
T Consensus 581 ~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~---------------- 638 (5163)
T PRK12316 581 ILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL------AAGVQVLDLDRPAA---------------- 638 (5163)
T ss_pred HHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc------ccCceEEEecCcch----------------
Confidence 99999999999999999999999999999999998764332210 00112222221110
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
+..............++++++++|||||||.||||+++|+++...+......+ ++..++++++.+|++|..++
T Consensus 639 --~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~fd~~~ 711 (5163)
T PRK12316 639 --WLEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-----GLGVGDTVLQKTPFSFDVSV 711 (5163)
T ss_pred --hhccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-----CCCCCCEEEeeCCeehHHHH
Confidence 01111111222344678999999999999999999999999999998887777 77889999999999999999
Q ss_pred HHHHHHHhcCcEEEEec----CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 282 IIETHCIHKGCSIGFWR----GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 282 ~~~~~~l~~G~~~v~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
..++.+|+.|+++++.+ .++..+++.++++++|++.++|++++.|++...
T Consensus 712 ~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~-------------------------- 765 (5163)
T PRK12316 712 WEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED-------------------------- 765 (5163)
T ss_pred HHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--------------------------
Confidence 88999999999999984 389999999999999999999999998864100
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccC-CCcccc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLA-DVFNMI 435 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~-~~~~~~ 435 (508)
.. ++ +++|.+++||+++++++.+.+.+.+ +..++|.||+||++..++.... ......
T Consensus 766 -----------~~--~~--------~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 824 (5163)
T PRK12316 766 -----------VA--SC--------TSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDS 824 (5163)
T ss_pred -----------cc--cC--------CCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCC
Confidence 00 11 3899999999999999999997765 7899999999999865544332 222334
Q ss_pred cccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-------CCccccCcEEEEcCCCC
Q 010535 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 436 ~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-------~gw~~TGDlg~~d~~G~ 508 (508)
.++|+|++|++++|+| +++..+|.| +.|||+|+|++++.||+++++.+.+.|. ++||+|||+|++|+||+
T Consensus 825 ~~iG~p~~~~~~~i~d-~~~~~~p~G--~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~ 901 (5163)
T PRK12316 825 VPIGRPIANLACYILD-ANLEPVPVG--VLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGV 901 (5163)
T ss_pred CCCccccCCCEEEEEC-CCCCCCCCC--CceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCC
Confidence 6899999999999999 888766655 8999999999999999999999999882 35999999999999985
No 94
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-47 Score=391.34 Aligned_cols=376 Identities=18% Similarity=0.232 Sum_probs=296.4
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
..++.++|.+++. ++++++++. + +.+||.||.++++++|.+|+++ |++++++|+++++|+++++++++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~----~-----~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~l 72 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFE----D-----SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLG 72 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEEC----C-----cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHH
Confidence 4678899988775 788998764 3 5799999999999999999997 89999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++|+++..+.+++.++++.++++++|+++.....+.... ... .++.... ..
T Consensus 73 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~-~~~~~~~----------------~~ 131 (529)
T PRK07867 73 AAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGV-RVINVDS----------------PA 131 (529)
T ss_pred HHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCc-eEEEecc----------------cc
Confidence 99999999999999999999999999999999999987665443221 111 1222211 01
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
+.+++... ..........++++++++|||||||.||+|+++|+++..........+ .+..+|+++..+|++|.+
T Consensus 132 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~ 206 (529)
T PRK07867 132 WADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-----GLGPDDVCYVSMPLFHSN 206 (529)
T ss_pred HHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-----CCCcccEEEEecchhHHH
Confidence 33333221 111223345678999999999999999999999999998888876666 677899999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 280 DQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 280 g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
++.. .+.++..|+++++.+. ++..+++.++++++|++.++|..+..++....
T Consensus 207 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~-------------------------- 260 (529)
T PRK07867 207 AVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPE-------------------------- 260 (529)
T ss_pred HHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC--------------------------
Confidence 9875 5568999999988764 89999999999999999999999887754100
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s 437 (508)
. .+.. ..++|. ++||+.+++.+ .++.+.+|.++++.||+||+++.+..... ...++
T Consensus 261 --------~--~~~~---------~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~~~---~~~~~ 316 (529)
T PRK07867 261 --------R--PDDA---------DNPLRI-VYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRTPD---TPPGA 316 (529)
T ss_pred --------c--cccc---------ccceEE-EecCCCChHHH-HHHHHHhCCcEEEeecccccccccccCCC---CCCCC
Confidence 0 0000 026774 56888887765 56667779999999999999865543221 23378
Q ss_pred cccccCCeEEEEeecCCCCccCCCCCC------------CceEEE-ecCcccccccCCcccccccccCCccccCcEEEEc
Q 010535 438 VGVPMTTVEARLESVPEMGYDALSSVP------------RGEICL-RGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQ 504 (508)
Q Consensus 438 ~G~p~~~~~~~i~d~~~~~~~~~~~~~------------~GEl~v-~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d 504 (508)
+|.|+++ ++|++.+.+..++.+ + .|||++ +|++++.||+++++.+.+.|.+|||+|||+|++|
T Consensus 317 ~g~~~~~--~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~ 392 (529)
T PRK07867 317 LGPLPPG--VAIVDPDTGTECPPA--EDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRD 392 (529)
T ss_pred cCCCCCC--EEEEECCCCCCCCCC--ccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEe
Confidence 9999999 677773344444443 5 899999 9999999999999999988999999999999999
Q ss_pred CCCC
Q 010535 505 PMEL 508 (508)
Q Consensus 505 ~~G~ 508 (508)
++|+
T Consensus 393 ~~g~ 396 (529)
T PRK07867 393 ADGY 396 (529)
T ss_pred CCCc
Confidence 9985
No 95
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.3e-47 Score=470.92 Aligned_cols=382 Identities=18% Similarity=0.204 Sum_probs=316.3
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|.++++++|+++|+++. ++ .+||+||.++++++|+.|.+.|+++|++|+|+++++++++++++
T Consensus 3718 ~~~~~~~~~~~~~~~~p~~~Av~~~---~~------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~l 3788 (4334)
T PRK05691 3718 LEQSYVRLFEAQVAAHPQRIAASCL---DQ------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIV 3788 (4334)
T ss_pred cccCHHHHHHHHHHhCCCceEEEcC---CC------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4569999999999999999999976 53 69999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCC-CCccEEEEecCCChhhhHHhhhcCceee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
|++++|+++|||+|.++.+++.++++.+++++++++............... .....++..+.
T Consensus 3789 avlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 3851 (4334)
T PRK05691 3789 GSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE----------------- 3851 (4334)
T ss_pred HHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc-----------------
Confidence 999999999999999999999999999999999999875543222211100 00111111111
Q ss_pred eHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHH
Q 010535 200 SWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (508)
Q Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 278 (508)
..... ..........+++++|++|||||||.||||+++|+++++.+......+ .+..+++++...++++.
T Consensus 3852 ----~~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~fd 3922 (4334)
T PRK05691 3852 ----VQAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-----ALSEADVIAQTASQSFD 3922 (4334)
T ss_pred ----cccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-----CCCccceEEEecCCchh
Confidence 10000 011122234678999999999999999999999999999998887776 78899999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 279 YDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 279 ~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.++..++.++..|+++++.+. ++..+++.++++++|++..+|++++.++.....
T Consensus 3923 ~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~---------------------- 3980 (4334)
T PRK05691 3923 ISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ---------------------- 3980 (4334)
T ss_pred HHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc----------------------
Confidence 999989999999999999863 788999999999999999999999887542100
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCc-
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVF- 432 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~- 432 (508)
.+ ++||.+++||+++++++.+.|.+.+ +..++|.||+||++..++.......
T Consensus 3981 ------------------~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~ 4034 (4334)
T PRK05691 3981 ------------------AL--------DGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLAS 4034 (4334)
T ss_pred ------------------cC--------CCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEccccc
Confidence 01 3799999999999999999998765 7899999999999987765433221
Q ss_pred --ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc--------CCccccCcEEE
Q 010535 433 --NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--------DGWFHTGDIGE 502 (508)
Q Consensus 433 --~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--------~gw~~TGDlg~ 502 (508)
....++|+|++++++.|+| +++..+|.| ..|||+|+|+.+++||+++|+.|.++|. ++||||||+|+
T Consensus 4035 ~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g--~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~ 4111 (4334)
T PRK05691 4035 TRGSYLPIGSPTDNNRLYLLD-EALELVPLG--AVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLAR 4111 (4334)
T ss_pred ccCCcCCCCCccCCCEEEEEC-CCCCCCCCC--CceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCccee
Confidence 1224699999999999999 888877766 8999999999999999999999999992 46999999999
Q ss_pred EcCCCC
Q 010535 503 WQPMEL 508 (508)
Q Consensus 503 ~d~~G~ 508 (508)
+++||+
T Consensus 4112 ~~~dG~ 4117 (4334)
T PRK05691 4112 RRSDGV 4117 (4334)
T ss_pred ecCCCc
Confidence 999985
No 96
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-47 Score=399.76 Aligned_cols=412 Identities=18% Similarity=0.238 Sum_probs=308.0
Q ss_pred CCCCCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh
Q 010535 17 DGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS 96 (508)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~ 96 (508)
.+.|......+........ .+....++.+.|.+.++++|+++|+++. + +.+||+||.++++++|.+|.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~~~~tl~~~l~~~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~ 81 (600)
T PRK08279 13 RRLPDLPGILRGLKRTALI--TPDSKRSLGDVFEEAAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAA 81 (600)
T ss_pred ccCCchhHHHhhhhhhccc--CCCCcccHHHHHHHHHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHh
Confidence 3444444444443333332 2245679999999999999999999875 3 479999999999999999999
Q ss_pred CCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccE
Q 010535 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 176 (508)
Q Consensus 97 ~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 176 (508)
.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++++|++.+....+.+..... .....
T Consensus 82 ~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~ 160 (600)
T PRK08279 82 RGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADL-ARPPR 160 (600)
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhh-cccce
Confidence 99999999999999999999999999999999999999999999999999999999999987766554433221 12222
Q ss_pred EEEecCCChhhhHHhhhcCceeeeHHHHHhcC---CC--CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHh
Q 010535 177 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLG---TL--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 251 (508)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~ 251 (508)
++..+...... ...+.++.... .. .........+++++|+|||||||.||+|.++|+++..++..
T Consensus 161 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~ 230 (600)
T PRK08279 161 LWVAGGDTLDD----------PEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGG 230 (600)
T ss_pred EEEecCccccc----------cccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHH
Confidence 33322211000 11222222211 11 11123345689999999999999999999999999999988
Q ss_pred hhhhhhhccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHH
Q 010535 252 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 329 (508)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 329 (508)
+...+ .+..+|++++.+|++|.+++.. .+.++..|+++++.+. ++..+++.++++++|++.++|++++.++..
T Consensus 231 ~~~~~-----~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~ 305 (600)
T PRK08279 231 FGGLL-----RLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQ 305 (600)
T ss_pred HHHhc-----CCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhC
Confidence 77766 7889999999999999999985 5567888888888764 899999999999999999999999887541
Q ss_pred HHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC
Q 010535 330 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 409 (508)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~ 409 (508)
.. .... .. .+++.+ +|+.+++++.+++.+.++.
T Consensus 306 ~~----------------------------------~~~~---~~--------~~l~~~--~g~~l~~~~~~~~~~~~~~ 338 (600)
T PRK08279 306 PP----------------------------------KPTD---RD--------HRLRLM--IGNGLRPDIWDEFQQRFGI 338 (600)
T ss_pred CC----------------------------------Cccc---cC--------cceeEE--ecCCCCHHHHHHHHHHhCc
Confidence 10 0000 00 266754 4777999999999998876
Q ss_pred -ceeeeccccCCCcceeeccCCCcccccccccccC----CeEE---------EEeecCCCCccCCCCCCCceEE--EecC
Q 010535 410 -PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMT----TVEA---------RLESVPEMGYDALSSVPRGEIC--LRGN 473 (508)
Q Consensus 410 -~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~----~~~~---------~i~d~~~~~~~~~~~~~~GEl~--v~g~ 473 (508)
.+++.||+||++..+.. . ....+++|++.+ +..+ .+.+ .++....+..|+.|||+ +.|+
T Consensus 339 ~~l~~~YG~tE~~~~~~~-~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~ 413 (600)
T PRK08279 339 PRILEFYAASEGNVGFIN-V---FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDR 413 (600)
T ss_pred ceeeeeecccccceeecc-c---CCCCcccccccccccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCc
Confidence 59999999998754332 1 122367777666 3333 2333 33433345566899998 7799
Q ss_pred cccccccCCcccccccc-------cCCccccCcEEEEcCCCC
Q 010535 474 TLFSGYYKRPDLTEEVI-------VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 474 ~v~~gY~~~~~~~~~~~-------~~gw~~TGDlg~~d~~G~ 508 (508)
.++.|| ++++.+.+.| .++||+|||+|++|+||+
T Consensus 414 ~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~ 454 (600)
T PRK08279 414 GPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGH 454 (600)
T ss_pred cccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCcc
Confidence 999999 8888887765 257999999999999985
No 97
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-47 Score=391.55 Aligned_cols=381 Identities=18% Similarity=0.221 Sum_probs=291.1
Q ss_pred HHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEE
Q 010535 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (508)
Q Consensus 50 ~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~ 129 (508)
-.+|+++|+++|+.+. +.. +.+||+||.++++++|..|.++|+++||+|+++++|+++++++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~ 76 (501)
T PRK13390 4 GTHAQIAPDRPAVIVA---ETG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYI 76 (501)
T ss_pred chhhhhCCCCcEEEec---CCC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 3567889999999864 322 579999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCC
Q 010535 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT 209 (508)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (508)
+|+++.++.+++.++++.+++++++++.......... .. .....+.+.... .....+++......
T Consensus 77 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 141 (501)
T PRK13390 77 TAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKV-GA---DLPLRLSFGGEI-----------DGFGSFEAALAGAG 141 (501)
T ss_pred eccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHh-hh---ccceEEEecCcc-----------cccccHHHHhcccC
Confidence 9999999999999999999999999977543322111 10 111111111100 01123333322211
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCcceeee--chHHHHHHHHh----hhhhhhhccccCCCCcEEEEecChHHHHHHHH
Q 010535 210 LDCELPPKKKTNISTIMYTSGTTGEPKGVVL--TNQAIVAEVLS----VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (508)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~--sh~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~ 283 (508)
......+++++|+|||||||.||+|.+ +|.++...... ....+ .+..++++++.+|++|.+++..
T Consensus 142 ----~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~ 212 (501)
T PRK13390 142 ----PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-----DISESDIYYSSAPIYHAAPLRW 212 (501)
T ss_pred ----CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-----CCCCCCeEEecccchhhhHHHH
Confidence 011123357999999999999999995 45555443211 11122 5678899999999999998876
Q ss_pred HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCC
Q 010535 284 ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQ 362 (508)
Q Consensus 284 ~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (508)
....+..|+++++.+. ++..+++.++++++|++.++|+++..+++....
T Consensus 213 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------ 262 (501)
T PRK13390 213 CSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDAD------------------------------ 262 (501)
T ss_pred HHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccch------------------------------
Confidence 5556778999988774 899999999999999999999999888642100
Q ss_pred CCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccccccccccc
Q 010535 363 NKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM 442 (508)
Q Consensus 363 ~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~ 442 (508)
.....++ +++|.+++||+++++++.+.+++.++..+++.||+||+++++...........+++|+|+
T Consensus 263 -----~~~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~ 329 (501)
T PRK13390 263 -----VRTRYDV--------SSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSV 329 (501)
T ss_pred -----hcccCCh--------hhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcc
Confidence 0001112 278999999999999999999998899999999999998765543333223347899999
Q ss_pred CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc---CCccccCcEEEEcCCCC
Q 010535 443 TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV---DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 443 ~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~---~gw~~TGDlg~~d~~G~ 508 (508)
++ +++|+| +++..++ .|+.|||+|+|++++.||+++++.+.+.|. ++|++|||+|++|+||+
T Consensus 330 ~g-~~~i~d-~~~~~~~--~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~ 394 (501)
T PRK13390 330 LG-DLHICD-DDGNELP--AGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGY 394 (501)
T ss_pred cc-eEEEEC-CCCCCCC--CCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCe
Confidence 99 799999 7777655 459999999999999999999999988773 68999999999999985
No 98
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-47 Score=387.10 Aligned_cols=353 Identities=25% Similarity=0.347 Sum_probs=287.6
Q ss_pred HHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEec
Q 010535 53 AKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL 132 (508)
Q Consensus 53 a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l 132 (508)
+++.++++|+++. + +.+||+||.++++++|..|. ++|+|+++++|+++++++++||+++|++++|+
T Consensus 10 ~~~~~~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l 75 (471)
T PRK07787 10 AAAADIADAVRIG---G------RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPV 75 (471)
T ss_pred hcccCCceEEEeC---C------cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeec
Confidence 4467889998764 3 57999999999999999996 46999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCCCCC
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDC 212 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (508)
++..+.+++..+++.+++++++++..... ..+......... ..+ .
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~il~~~~~~~----------~~~~~~~~~~~~---------------~~~----------~ 120 (471)
T PRK07787 76 PPDSGVAERRHILADSGAQAWLGPAPDDP----------AGLPHVPVRLHA---------------RSW----------H 120 (471)
T ss_pred CCCCChHHHHHHHHhcCCCEEEecCCccc----------ccccceeeeccc---------------ccc----------c
Confidence 99999999999999999999999763110 001110000000 000 0
Q ss_pred CCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHH-HHHHHhcC
Q 010535 213 ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKG 291 (508)
Q Consensus 213 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G 291 (508)
......++++++++|||||||.||+|.++|+++...+......+ ....++++++.+|++|..|+.. .+.++..|
T Consensus 121 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 195 (471)
T PRK07787 121 RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-----QWTADDVLVHGLPLFHVHGLVLGVLGPLRIG 195 (471)
T ss_pred cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-----CCCccceeEeccCCeeechhHHHHHHHHhcC
Confidence 11123568999999999999999999999999999888777666 6778899999999999999885 77899999
Q ss_pred cEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhh
Q 010535 292 CSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLD 370 (508)
Q Consensus 292 ~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (508)
+++++.+. ++..+++.++ +++|++.++|.++..+++... .
T Consensus 196 ~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-------------------------------------~- 236 (471)
T PRK07787 196 NRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-------------------------------------A- 236 (471)
T ss_pred CEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-------------------------------------c-
Confidence 99998764 8999999999 999999999999998864100 0
Q ss_pred HHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEe
Q 010535 371 SLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLE 450 (508)
Q Consensus 371 ~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~ 450 (508)
...+ .++|.+++||+++++++.+++.+.++..+++.||+||++..+..... ....++++|+|+++++++|+
T Consensus 237 ~~~l--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~g~~~~i~ 307 (471)
T PRK07787 237 ARAL--------RGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRAD-GERRPGWVGLPLAGVETRLV 307 (471)
T ss_pred cccc--------cceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCC-CcccCCcccccCCCcEEEEE
Confidence 0011 37999999999999999999999889999999999999865443332 23334789999999999999
Q ss_pred ecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 451 SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 451 d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
| +++..++...++.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 308 d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~ 365 (471)
T PRK07787 308 D-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGM 365 (471)
T ss_pred C-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCC
Confidence 9 77766653222489999999999999999999999888 589999999999999985
No 99
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-46 Score=389.68 Aligned_cols=401 Identities=23% Similarity=0.294 Sum_probs=299.0
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.++.+.|++.++.+|+++|+++. + ..+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~ 88 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG---D------RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGV 88 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC---C------eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 67889999999999999999764 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+++|++++|+++..+.+++..+++.+++++++++......+.+..... ... ..+.+....... .........+++
T Consensus 89 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~---~~~~~~~~~~~~ 163 (545)
T PRK08162 89 PMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALL-PGP-KPLVIDVDDPEY---PGGRFIGALDYE 163 (545)
T ss_pred HHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhC-CCC-ceEEEecCcccc---ccCCCcccccHH
Confidence 999999999999999999999999999999999988766554432211 111 122222111100 000011233566
Q ss_pred HHHhcCCCCCC-CCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 203 EFLQLGTLDCE-LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 203 ~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
++......... ..+.+.+++++++|||||||.||+|.++|+++...+......+ .+..++++++.+|++|..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~~~ 238 (545)
T PRK08162 164 AFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-----GMPKHPVYLWTLPMFHCNGW 238 (545)
T ss_pred HHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeeEeccCcHhhhhH
Confidence 66544311111 1123446789999999999999999999998876665544333 56778899999999999998
Q ss_pred HHHHHHHhcCcEEEEe-cCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCC
Q 010535 282 IIETHCIHKGCSIGFW-RGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM 360 (508)
Q Consensus 282 ~~~~~~l~~G~~~v~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (508)
...+...+.|+..++. ..++..+++.++++++|++.++|.+++.|++.....
T Consensus 239 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------------- 291 (545)
T PRK08162 239 CFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEW--------------------------- 291 (545)
T ss_pred HHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccc---------------------------
Confidence 7644433444444444 459999999999999999999999999986521000
Q ss_pred CCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC---------
Q 010535 361 PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV--------- 431 (508)
Q Consensus 361 ~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~--------- 431 (508)
...+ .+.+.++++|+.+++++.+.+++. +.++++.||+||+++.+.......
T Consensus 292 ----------~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 352 (545)
T PRK08162 292 ----------RAGI--------DHPVHAMVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDE 352 (545)
T ss_pred ----------ccCC--------ccceEEEECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccc
Confidence 0000 134566889999999999998874 899999999999876554432110
Q ss_pred -cccccccccccCC-eEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 432 -FNMIGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 432 -~~~~~s~G~p~~~-~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
....++.|.+++. ..++|+|.+++..++.+.++.|||+|+|+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 353 ~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~ 431 (545)
T PRK08162 353 RAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGY 431 (545)
T ss_pred hhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcCCcc
Confidence 0112456776653 4578888334444443222479999999999999999999999999999999999999999985
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=8.9e-47 Score=425.20 Aligned_cols=392 Identities=20% Similarity=0.239 Sum_probs=302.3
Q ss_pred CCCCCHHHHHHHHHHhCC-CCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHH
Q 010535 40 AGLESPWQFFCDSAKRIP-NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p-~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~ 118 (508)
+...++.+.+.+.++++| ++.++.+. ++ +.+||+||.++++++|++|++ |+++||+|+++++|+++++++
T Consensus 628 ~~~~~~~~~l~~~~~~~~~~~~ai~~~---~~-----~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~ 698 (1140)
T PRK06814 628 DYDRTLFEALIEAAKIHGFKKLAVEDP---VN-----GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVT 698 (1140)
T ss_pred cccCCHHHHHHHHHHHcCCCCeEeECC---CC-----CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHH
Confidence 445778899999999887 45666543 22 479999999999999999975 999999999999999999999
Q ss_pred HHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHh-hcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
++||+++|++++|+||..+.+++.+++++++++++|+++....... ............++.+++..... ..
T Consensus 699 ~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~ 770 (1140)
T PRK06814 699 FFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQI--------GL 770 (1140)
T ss_pred HHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccC--------Ch
Confidence 9999999999999999999999999999999999999875433210 00000011222344443211100 00
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHH
Q 010535 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
...+++...............++++++++|||||||.||+|.++|+++...+......+ ....+|++++.+|++|
T Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h 845 (1140)
T PRK06814 771 ADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-----DFSPEDKVFNALPVFH 845 (1140)
T ss_pred HHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-----CCCCcCEEEEecchHH
Confidence 00111111111111111134678999999999999999999999999998888877666 6788999999999999
Q ss_pred HHHHH-HHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 278 IYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 278 ~~g~~-~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.+++. ..+.++..|+++++.+. +...+.+.++++++|++.++|++++.+.+..
T Consensus 846 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~------------------------ 901 (1140)
T PRK06814 846 SFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA------------------------ 901 (1140)
T ss_pred HHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc------------------------
Confidence 99985 47789999999998864 6678889999999999999999998875410
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~ 434 (508)
+..++ +++|.+++||+++++++.+.+.+.++.++++.||+||++..+....... ..
T Consensus 902 ---------------~~~~~--------~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~ 957 (1140)
T PRK06814 902 ---------------HPYDF--------RSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMH-NK 957 (1140)
T ss_pred ---------------ccccc--------cceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCC-CC
Confidence 00111 3899999999999999999999999999999999999988766554333 33
Q ss_pred ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccc-ccccCCccccCcEEEEcCCCC
Q 010535 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE-EVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 435 ~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~-~~~~~gw~~TGDlg~~d~~G~ 508 (508)
.+++|+|+|++++++.+ .++ .++.|||+++|++++.||+++++... +.+.+|||+|||+|++|+||+
T Consensus 958 ~~~vG~p~~g~~~~~~~-~~~------~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~ 1025 (1140)
T PRK06814 958 AGTVGRLLPGIEYRLEP-VPG------IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGF 1025 (1140)
T ss_pred CCcCCccCCCCeEEEee-cCC------CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCe
Confidence 47999999999999988 332 23789999999999999998765332 223689999999999999985
No 101
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-47 Score=397.97 Aligned_cols=393 Identities=20% Similarity=0.247 Sum_probs=298.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh
Q 010535 35 LLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (508)
Q Consensus 35 ~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~ 114 (508)
++....++.++.++|+..++.+|+..++ + .++..++.+||.||.++++++|.+|.++|+++||+|+++++|+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~ 86 (579)
T PRK09192 13 LPRRYADFPTLVEALDYAALGEAGMNFY-D-----RRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGD 86 (579)
T ss_pred ccccccchhhHHHHHHHhhccCCceEEE-e-----cCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchh
Confidence 4444456789999999999998866544 3 222334789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEeccCCCC-------HHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhh
Q 010535 115 WIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ 187 (508)
Q Consensus 115 ~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 187 (508)
++++++||+++|++++|+++..+ .+++.++++.++++++|+++.....+.+.... ....+
T Consensus 87 ~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~----~~~~~--------- 153 (579)
T PRK09192 87 FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHG----NPLLH--------- 153 (579)
T ss_pred HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcc----ccccc---------
Confidence 99999999999999999987543 68999999999999999988765554432211 01111
Q ss_pred hHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhh-hhhhccccCCCC
Q 010535 188 KKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ-MFVVTGKVCSEE 266 (508)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~-~~~~~~~~~~~~ 266 (508)
...++++...............+++++++|||||||.||+|.++|+++...+..... .+ ....+
T Consensus 154 ----------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-----~~~~~ 218 (579)
T PRK09192 154 ----------VLSHAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-----KVRPG 218 (579)
T ss_pred ----------eeehhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-----cCCCC
Confidence 112222222111111222345688999999999999999999999999988877665 44 67889
Q ss_pred cEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChh
Q 010535 267 DTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (508)
Q Consensus 267 ~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 340 (508)
|++++.+|++|.+++.. ++.++..|+++++... ++..+++.+.++++++++..|..+..+.....
T Consensus 219 d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~--------- 289 (579)
T PRK09192 219 DRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVN--------- 289 (579)
T ss_pred CeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhc---------
Confidence 99999999999999884 5567889998877652 68899999999999987765544444322100
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC------Cceeee
Q 010535 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQG 414 (508)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~------~~l~~~ 414 (508)
.......+++ ++|.+++||+++++++.+.+.+.++ ..+++.
T Consensus 290 -------------------------~~~~~~~~l~--------~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 336 (579)
T PRK09192 290 -------------------------SKDLAELDLS--------CWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPS 336 (579)
T ss_pred -------------------------cccccccchh--------hhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccc
Confidence 0011122333 7899999999999999999988763 359999
Q ss_pred ccccCCCcceeeccCCCc---------------------------ccccccccccCCeEEEEeecCCCCccCCCCCCCce
Q 010535 415 YGLTESCSGCFTSLADVF---------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGE 467 (508)
Q Consensus 415 YG~TE~~~~~~~~~~~~~---------------------------~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GE 467 (508)
||+||+++.++....... ...+++|+|+|+++++|+| +++..++. ++.||
T Consensus 337 yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~--g~~Ge 413 (579)
T PRK09192 337 YGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPE--RVVGH 413 (579)
T ss_pred cccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCC--CCEEE
Confidence 999999876654332110 0125789999999999999 77766554 48999
Q ss_pred EEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 468 ICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 468 l~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
|+++|+.++.||+++ +.+.+.+ .+|||+|||+|++ ++|+
T Consensus 414 l~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~ 453 (579)
T PRK09192 414 ICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGY 453 (579)
T ss_pred EEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCE
Confidence 999999999999999 5555555 7899999999999 7874
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.8e-47 Score=465.94 Aligned_cols=378 Identities=20% Similarity=0.292 Sum_probs=313.3
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.+.|+++|++|+++++++++++++++
T Consensus 1129 ~~~~l~~~~~~~a~~~p~~~Al~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~l 1199 (4334)
T PRK05691 1129 AQAWLPELLNEQARQTPERIALVWD---G------GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLL 1199 (4334)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4568999999999999999999875 4 469999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
|++++|++++||+|..+.+++.++++.++++++|++......+... ... ..+.++...
T Consensus 1200 ailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~-----~~~-~~~~~~~~~---------------- 1257 (4334)
T PRK05691 1200 AILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA-----EGV-SAIALDSLH---------------- 1257 (4334)
T ss_pred HHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc-----cCc-eEEeecccc----------------
Confidence 9999999999999999999999999999999999987654332110 000 111111110
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
... ...........++++++++|||||||.||||.++|+++...+......+ .+.+++++++..|++|..+
T Consensus 1258 ~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~s 1328 (4334)
T PRK05691 1258 LDS----WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATY-----ALDDSDVLMQKAPISFDVS 1328 (4334)
T ss_pred ccc----cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHHHH
Confidence 000 0001112234678999999999999999999999999999988877766 7889999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+..++.++..|+++++.+. ++..+++.++++++|++.++|++++.+.+...
T Consensus 1329 ~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~------------------------- 1383 (4334)
T PRK05691 1329 VWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL------------------------- 1383 (4334)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc-------------------------
Confidence 8888999999999999752 78999999999999999999999998754100
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccC-CCccc
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLA-DVFNM 434 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~-~~~~~ 434 (508)
..++ ++||.+++||+++++++.++|.+.+ +..++|.||+||++..++.... .....
T Consensus 1384 --------------~~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 1441 (4334)
T PRK05691 1384 --------------AAAC--------TSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGE 1441 (4334)
T ss_pred --------------cccC--------CcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCC
Confidence 0011 3899999999999999999998877 6899999999999876664322 22223
Q ss_pred ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc--------CCccccCcEEEEcCC
Q 010535 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--------DGWFHTGDIGEWQPM 506 (508)
Q Consensus 435 ~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--------~gw~~TGDlg~~d~~ 506 (508)
..++|+|+++++++|+| +++..+|.| +.|||+|+|+++++||+++|+.+.+.|. ++||+|||+|++++|
T Consensus 1442 ~~~iG~p~~~~~~~i~d-~~~~~vp~G--~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~d 1518 (4334)
T PRK05691 1442 RSPIGRPLGNVLCRVLD-AELNLLPPG--VAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNAD 1518 (4334)
T ss_pred CCcccceeCCCEEEEEC-CCCCCCCCC--CceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCC
Confidence 47899999999999999 888777655 8999999999999999999999999883 249999999999999
Q ss_pred CC
Q 010535 507 EL 508 (508)
Q Consensus 507 G~ 508 (508)
|+
T Consensus 1519 G~ 1520 (4334)
T PRK05691 1519 GA 1520 (4334)
T ss_pred CC
Confidence 85
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.8e-46 Score=385.60 Aligned_cols=386 Identities=20% Similarity=0.226 Sum_probs=300.2
Q ss_pred HHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEE
Q 010535 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (508)
Q Consensus 50 ~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~ 129 (508)
...++++|+++|+++. ++. +.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~ 76 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA---STG----EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYY 76 (511)
T ss_pred hhhHhhCCCceEEEec---CCC----CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEE
Confidence 4677889999999864 332 579999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCC
Q 010535 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT 209 (508)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (508)
+++++.++.+++.++++.+++++++++......+.+.... .......+.+...... .....+++.....
T Consensus 77 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~- 145 (511)
T PRK13391 77 TCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQ-CPGVRHRLVLDGDGEL---------EGFVGYAEAVAGL- 145 (511)
T ss_pred eccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhc-CCCceEEEEecCCCCC---------cccccHHHHhcCC-
Confidence 9999999999999999999999999998766554433322 2233333333321110 1122344433221
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCcceeee--chHHHHHHH---HhhhhhhhhccccCCCCcEEEEecChHHHHHHHHH
Q 010535 210 LDCELPPKKKTNISTIMYTSGTTGEPKGVVL--TNQAIVAEV---LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIE 284 (508)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~--sh~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~ 284 (508)
+ .......++.++++|||||||.||+|.+ +|.++.... ......+ .+..++++++.+|++|.+++...
T Consensus 146 -~-~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~ 218 (511)
T PRK13391 146 -P-ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-----GFRSDMVYLSPAPLYHSAPQRAV 218 (511)
T ss_pred -C-CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-----CCCCCCeEEEcCCHHHHHHHHHH
Confidence 1 1111234567899999999999999995 466654332 2222222 56788999999999999998888
Q ss_pred HHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCC
Q 010535 285 THCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (508)
Q Consensus 285 ~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (508)
+.++..|+++++.+. ++..+++.++++++|++.++|+++..+++.....
T Consensus 219 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------------------------------ 268 (511)
T PRK13391 219 MLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEV------------------------------ 268 (511)
T ss_pred HHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhh------------------------------
Confidence 889999999998874 9999999999999999999999998875421100
Q ss_pred CcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccC
Q 010535 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMT 443 (508)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~ 443 (508)
.+..++ +++|.+++||+++++++.+++++.+|..+++.||+||++.++...........+++|+|++
T Consensus 269 -----~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~ 335 (511)
T PRK13391 269 -----RDKYDL--------SSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMF 335 (511)
T ss_pred -----cccCCc--------cceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCccc
Confidence 001111 3899999999999999999999988999999999999987765543333334579999999
Q ss_pred CeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-c-CCccccCcEEEEcCCCC
Q 010535 444 TVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V-DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 444 ~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~-~gw~~TGDlg~~d~~G~ 508 (508)
+ .++|+| +++...+. |+.|||+++|+ ++.||+++++.+.+.| . ++||+|||+|++|++|+
T Consensus 336 g-~~~i~d-~~~~~~~~--g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~ 397 (511)
T PRK13391 336 G-DLHILD-DDGAELPP--GEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGY 397 (511)
T ss_pred c-eEEEEC-CCCCCCCC--CCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCcc
Confidence 9 689998 77765554 48999999999 8899999999888877 3 48999999999999984
No 104
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.8e-46 Score=385.37 Aligned_cols=376 Identities=19% Similarity=0.210 Sum_probs=303.8
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.++.++|+++++.+|+++++.+. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+.+++++++||
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~---~------~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~ 72 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL---G------EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGA 72 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 57889999999999999998764 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+++|++++|+++..+.+++..+++..+++++++++...... ..+ ..+... .+.
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~------------------~~~ 125 (503)
T PRK04813 73 VKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------LGI-PVITLD------------------ELK 125 (503)
T ss_pred HHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------cCC-cEEehH------------------Hhh
Confidence 99999999999999999999999999999999987641100 001 111110 111
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH
Q 010535 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (508)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 282 (508)
+................+++++++|||||||.||+|.++|+++...+......+ .+..++++++..|++|..++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~ 200 (503)
T PRK04813 126 DIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-----ALPEGPQFLNQAPYSFDLSVM 200 (503)
T ss_pred hhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-----CCCcCceeeecCCcchhHhHH
Confidence 111111111112234668899999999999999999999999998888766655 677899999999999999988
Q ss_pred HHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 283 IETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 283 ~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
..+.++..|+++++.+. ++..+++.+++++++++..+|++++.++....
T Consensus 201 ~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~--------------------------- 253 (503)
T PRK04813 201 DLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPS--------------------------- 253 (503)
T ss_pred HHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhc---------------------------
Confidence 88889999999998764 78999999999999999999999987643110
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC----cc
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV----FN 433 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~----~~ 433 (508)
....++ +++|.++++|+++++.+.+++.+.+ +..+++.||+||++..++...... ..
T Consensus 254 ----------~~~~~~--------~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 315 (503)
T PRK04813 254 ----------FNEEHL--------PNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQY 315 (503)
T ss_pred ----------cCcccC--------CCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccC
Confidence 000111 3799999999999999999999988 789999999999976554322211 12
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc--C--CccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--D--GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~--~--gw~~TGDlg~~d~~G~ 508 (508)
...++|++.++++++|+| +++..++. ++.|||+++|+.++.||+++++.+.+.|. + +||+|||+|++ ++|+
T Consensus 316 ~~~~~g~~~~~~~~~i~d-~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~ 390 (503)
T PRK04813 316 KRLPIGYAKPDSPLLIID-EEGTKLPD--GEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGL 390 (503)
T ss_pred CCCcccccCCCCEEEEEC-CCCCCCCC--CCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCe
Confidence 235799999999999999 77776654 48999999999999999999999888772 3 49999999999 7774
No 105
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-46 Score=392.95 Aligned_cols=394 Identities=18% Similarity=0.250 Sum_probs=288.2
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCC---CCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDG---KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~---~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
++.++|++++..+|+++|+++. +. ..+..+.+||.||.++++++|++|.+.| .+||+|+++++|+++++++++
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~l 77 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFI---DYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFL 77 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEE---ccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHH
Confidence 5789999999999999999875 31 1122468999999999999999999999 689999999999999999999
Q ss_pred HHHhcCCEEEeccC---CCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccC-CCCccEEEEecCCChhhhHHhhhcCc
Q 010535 121 ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 121 A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
||+++|++++|+++ ..+.+++.++++.++++++++++.....+....... ......++..+..
T Consensus 78 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 144 (578)
T PRK05850 78 GALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL------------- 144 (578)
T ss_pred HHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc-------------
Confidence 99999999999997 457889999999999999999887665543321110 0011112211110
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhh-ccccCCCCcEEEEecCh
Q 010535 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV-TGKVCSEEDTYFSFLPL 275 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~pl 275 (508)
++. ............+++++++|||||||.||||.++|+++..++......+.. .......++++++.+|+
T Consensus 145 ------~~~--~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 216 (578)
T PRK05850 145 ------DLD--SPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPF 216 (578)
T ss_pred ------ccc--cCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCC
Confidence 000 000011123456899999999999999999999999999887665433211 01123567899999999
Q ss_pred HHHHHHHH-HHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHH
Q 010535 276 AHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (508)
Q Consensus 276 ~~~~g~~~-~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (508)
+|.+|+.. .+.+++.|+++++.+. ++..+++.+++++++++ .+|.++..++....
T Consensus 217 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~------------------ 277 (578)
T PRK05850 217 YHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKT------------------ 277 (578)
T ss_pred CCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhc------------------
Confidence 99999874 7889999999998863 68999999999999865 56665444322100
Q ss_pred HHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC------CceeeeccccCCCcc
Q 010535 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGLTESCSG 423 (508)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~------~~l~~~YG~TE~~~~ 423 (508)
.......++++ ++|.+++||+++++++.++|.+.++ ..+++.||+||++..
T Consensus 278 ---------------~~~~~~~~~~~--------~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 334 (578)
T PRK05850 278 ---------------SDDDMAGLDLG--------GVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVY 334 (578)
T ss_pred ---------------chhhhcCcchh--------hheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhh
Confidence 00001111222 7899999999999999999988762 369999999998765
Q ss_pred eeeccCCCc------------------------ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccc
Q 010535 424 CFTSLADVF------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 479 (508)
Q Consensus 424 ~~~~~~~~~------------------------~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY 479 (508)
+........ ....++|.|. +.+++|+|.+++..++ .|+.|||+|+|+.++.||
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~--~g~~Gel~v~g~~~~~gY 411 (578)
T PRK05850 335 VATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECP--AGTVGEIWVHGDNVAAGY 411 (578)
T ss_pred eeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCC--CCCEEEEEEecCcccccc
Confidence 543221110 0011345553 5789999933344444 558999999999999999
Q ss_pred cCCccccccccc------------CCccccCcEEEEcCCCC
Q 010535 480 YKRPDLTEEVIV------------DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 480 ~~~~~~~~~~~~------------~gw~~TGDlg~~d~~G~ 508 (508)
+++++.+.+.|. +|||+|||+|++| ||+
T Consensus 412 ~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~ 451 (578)
T PRK05850 412 WQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGE 451 (578)
T ss_pred cCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCE
Confidence 999999998883 4799999999998 774
No 106
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.6e-45 Score=370.34 Aligned_cols=350 Identities=23% Similarity=0.324 Sum_probs=286.9
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 79 TYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 79 Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
||.||.+.++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred CChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcc
Q 010535 158 NKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPK 236 (508)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK 236 (508)
.....+..... ..+...... ....... ...........+++++++|||||||.||
T Consensus 81 ~~~~~~~~~~~-------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK 136 (408)
T TIGR01733 81 ALASRLAGLVL-------PIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPK 136 (408)
T ss_pred chhhhccccCC-------ceEEechhh-----------------hhhcccccccccccCCCCCCCcEEEEEcCCCCCCCC
Confidence 76554422211 111111100 0000000 0000111135688999999999999999
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhc
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELK 312 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~ 312 (508)
+|.++|+++......+...+ .+..++++++..|++|.+++...+.++..|+++++... .+..+.+.+++++
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLARRY-----GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred EEEeccHHHHHHHHHHHHhc-----CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 99999999999999887766 77789999999999999998889999999999998874 2688999999999
Q ss_pred CeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeec
Q 010535 313 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 392 (508)
Q Consensus 313 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG 392 (508)
+|.+.++|.+++.+.+... .++ +++|.+++||
T Consensus 212 ~t~l~~~p~~~~~l~~~~~----------------------------------------~~~--------~~l~~v~~~g 243 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP----------------------------------------PAL--------ASLRLVILGG 243 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh----------------------------------------hcc--------cCceEEEEeC
Confidence 9999999999999875321 011 3899999999
Q ss_pred CCCCHHHHHHHHHhcC-CceeeeccccCCCcceeeccCCCcc----cccccccccCCeEEEEeecCCCCccCCCCCCCce
Q 010535 393 APLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADVFN----MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGE 467 (508)
Q Consensus 393 ~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~~----~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GE 467 (508)
+++++++.+.+++.++ ..+++.||+||++.++......... ...++|+|+++++++|++ +++..++ .|+.||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~--~g~~Ge 320 (408)
T TIGR01733 244 EALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD-DDLRPVP--VGVVGE 320 (408)
T ss_pred ccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-CCCCCCC--CCCceE
Confidence 9999999999999997 8999999999998877533222211 147899999999999999 7766554 458999
Q ss_pred EEEecCcccccccCCcccccccccC-------C--ccccCcEEEEcCCCC
Q 010535 468 ICLRGNTLFSGYYKRPDLTEEVIVD-------G--WFHTGDIGEWQPMEL 508 (508)
Q Consensus 468 l~v~g~~v~~gY~~~~~~~~~~~~~-------g--w~~TGDlg~~d~~G~ 508 (508)
|+++|+.++.||+++++.+.+.|.. | ||+|||+|++|++|+
T Consensus 321 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~ 370 (408)
T TIGR01733 321 LYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGN 370 (408)
T ss_pred EEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCC
Confidence 9999999999999999998888732 2 999999999999985
No 107
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.2e-45 Score=377.79 Aligned_cols=399 Identities=21% Similarity=0.243 Sum_probs=306.5
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~ 123 (508)
|+.++|.+.++++|+++|+.+. . +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+
T Consensus 4 ~l~~~~~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~ 74 (533)
T PRK07798 4 NIADLFEAVADAVPDRVALVCG---D------RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAF 74 (533)
T ss_pred cHHHHHHHHHHhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 7899999999999999999875 2 579999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHH
Q 010535 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (508)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (508)
++|++++++++.++.+++.++++.+++++++++......+.+... .....+.++.+++..... .......+++
T Consensus 75 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 147 (533)
T PRK07798 75 KARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLP-RLPKLRTLVVVEDGSGND------LLPGAVDYED 147 (533)
T ss_pred hcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhc-cCCCccEEEEecCCcccc------cCCccccHHH
Confidence 999999999999999999999999999999999876666554432 224455566655432210 0112345666
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhh----ccccC------CCCcEEEEec
Q 010535 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV----TGKVC------SEEDTYFSFL 273 (508)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~----~~~~~------~~~~~~l~~~ 273 (508)
+............ ..++.++++|||||||.||+|+++|+++...+......+.. ....+ ..+++++..+
T Consensus 148 ~~~~~~~~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (533)
T PRK07798 148 ALAAGSPERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAP 226 (533)
T ss_pred HHhccCCcCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEec
Confidence 6654322211112 23345789999999999999999999988765543222100 00011 4678999999
Q ss_pred ChHHHHHHHHHHHHHhcCcEEEEec--C-CHhhHHHHhhhhcCeEEEecchHHHH-HHHHHHHhhhcCChhHHHHHHHHH
Q 010535 274 PLAHIYDQIIETHCIHKGCSIGFWR--G-DVRYLMEDIQELKPTMFSGVPRVYDR-IYTGISNKISSGGALSKKLFEFAY 349 (508)
Q Consensus 274 pl~~~~g~~~~~~~l~~G~~~v~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~ 349 (508)
|++|..++...+.+++.|+++++.+ . ++..+++.++++++|.+.++|..+.. +.+.+. .
T Consensus 227 pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~---------------- 289 (533)
T PRK07798 227 PLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-A---------------- 289 (533)
T ss_pred chhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-c----------------
Confidence 9999999998889999999999987 3 89999999999999999999987654 322111 0
Q ss_pred HHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeecc
Q 010535 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSL 428 (508)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~ 428 (508)
....++ +++|.+++||+++++++.+++++.+ +..+++.||+||++.+.....
T Consensus 290 -------------------~~~~~~--------~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 342 (533)
T PRK07798 290 -------------------RGPYDL--------SSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTV 342 (533)
T ss_pred -------------------cccCCC--------CceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCC
Confidence 000011 3899999999999999999999988 789999999999866554332
Q ss_pred CCCcccccccc--cccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc----CCccccCcEEE
Q 010535 429 ADVFNMIGTVG--VPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV----DGWFHTGDIGE 502 (508)
Q Consensus 429 ~~~~~~~~s~G--~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~----~gw~~TGDlg~ 502 (508)
.... ...| ++.++..++|++ +++...+.+....|+|+ +++.++.||+++++.+.+.|. ++||+|||+|+
T Consensus 343 ~~~~---~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~ 417 (533)
T PRK07798 343 AKGA---VHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRAR 417 (533)
T ss_pred CCCC---ccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEE
Confidence 2111 2334 788999999999 88876665532226665 566899999999999988883 25999999999
Q ss_pred EcCCCC
Q 010535 503 WQPMEL 508 (508)
Q Consensus 503 ~d~~G~ 508 (508)
+|+||+
T Consensus 418 ~~~~g~ 423 (533)
T PRK07798 418 VEADGT 423 (533)
T ss_pred EcCCCc
Confidence 999985
No 108
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-45 Score=380.43 Aligned_cols=371 Identities=20% Similarity=0.245 Sum_probs=292.0
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 155 (508)
+.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCc
Q 010535 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEP 235 (508)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~p 235 (508)
++.....+.+.........+.++...... .....+++...... .......++.++++|||||||.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~P 155 (502)
T PRK08276 90 SAALADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQP---DTPIADETAGADMLYSSGTTGRP 155 (502)
T ss_pred ccchhhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCC---CCCCCCCCcceEEEECCCCCCCC
Confidence 88766554433222111344444432111 11234444443221 11223556789999999999999
Q ss_pred ceeeechHHHHHHHH--hhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhc
Q 010535 236 KGVVLTNQAIVAEVL--SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELK 312 (508)
Q Consensus 236 K~v~~sh~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~ 312 (508)
|+|.++|.++..... ........ ......++++++..|++|..++...+.++..|+++++.+. ++..+++.+++++
T Consensus 156 K~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 234 (502)
T PRK08276 156 KGIKRPLPGLDPDEAPGMMLALLGF-GMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYR 234 (502)
T ss_pred ceEEEccCCcchhhhhHHhhhhhhh-cccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhC
Confidence 999999877654332 11111111 1122467899999999999998887789999999988874 8999999999999
Q ss_pred CeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeec
Q 010535 313 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 392 (508)
Q Consensus 313 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG 392 (508)
+|++.++|+++..+++... ...+.++++ ++|.+++||
T Consensus 235 ~t~~~~~P~~~~~l~~~~~-----------------------------------~~~~~~~~~--------~lr~i~~~g 271 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLPE-----------------------------------EVRARYDVS--------SLRVAIHAA 271 (502)
T ss_pred CeEEEehHHHHHHHHhCcc-----------------------------------ccCCCCCcc--------cceEEEecC
Confidence 9999999999998864210 001112232 899999999
Q ss_pred CCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec
Q 010535 393 APLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 472 (508)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g 472 (508)
+++++++.+++.+.++..+++.||+||++.++...........+++|+|+ ++.++|+| +++..++. |+.|||+++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~--g~~Gel~v~~ 347 (502)
T PRK08276 272 APCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGNELPP--GEIGTVYFEM 347 (502)
T ss_pred CCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCCCCcC--CCceEEEEEC
Confidence 99999999999998899999999999999866665444334447899999 88999999 77765554 4899999999
Q ss_pred CcccccccCCccccccccc-CCccccCcEEEEcCCCC
Q 010535 473 NTLFSGYYKRPDLTEEVIV-DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 473 ~~v~~gY~~~~~~~~~~~~-~gw~~TGDlg~~d~~G~ 508 (508)
+.++.||+++++.+.+.+. +|||+|||+|++|++|+
T Consensus 348 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 384 (502)
T PRK08276 348 DGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGY 384 (502)
T ss_pred CCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcC
Confidence 9999999999999988884 49999999999999985
No 109
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-45 Score=375.92 Aligned_cols=344 Identities=28% Similarity=0.340 Sum_probs=281.8
Q ss_pred CCHHHHH-HHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 43 ESPWQFF-CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 43 ~t~~~~l-~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+++.+.+ ...++++|+++|+.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la 72 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLN---D------EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLA 72 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecC---C------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHH
Confidence 3455554 5558899999999754 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|+++..+.+++..+++.+++++++++++... +.. +.... +
T Consensus 73 ~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~--------~~~~~----------------------~ 121 (458)
T PRK09029 73 LLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA--------LTSLH----------------------L 121 (458)
T ss_pred HHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh--------ccccc----------------------c
Confidence 9999999999999999999999999999999998875422 100 00000 0
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
. ...........++++++++|||||||.||+|.++|++++..+......+ ....+++++..+|++|.+|+
T Consensus 122 ~-----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~g~ 191 (458)
T PRK09029 122 Q-----LVEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-----PFTAQDSWLLSLPLFHVSGQ 191 (458)
T ss_pred c-----cccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-----CCCccceEEEecCcHhhhhh
Confidence 0 0001112234578899999999999999999999999999988876665 67789999999999999998
Q ss_pred HHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCC
Q 010535 282 IIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (508)
Q Consensus 282 ~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (508)
...+.++..|+++++.+. ..+++.+ .++|.+..+|+++..++....
T Consensus 192 ~~~~~~l~~G~~v~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~------------------------------ 237 (458)
T PRK09029 192 GIVWRWLYAGATLVVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRS------------------------------ 237 (458)
T ss_pred HHHHHHHhCCceEEeCCh--HHHHHHH--hhceeeecChHHHHHHHhccc------------------------------
Confidence 877788999999998764 4566666 479999999999988764210
Q ss_pred CCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccc
Q 010535 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (508)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p 441 (508)
. ..++|.+++||+++++.+.+++.+. |.++++.||+||++...+....+ . ..++|+|
T Consensus 238 ----~---------------~~~l~~i~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~--~-~~~~G~~ 294 (458)
T PRK09029 238 ----E---------------PLSLKAVLLGGAAIPVELTEQAEQQ-GIRCWCGYGLTEMASTVCAKRAD--G-LAGVGSP 294 (458)
T ss_pred ----c---------------CCcceEEEECCCCCCHHHHHHHHHc-CCcEeccccccccCcceeccCCC--C-CCCCCCC
Confidence 0 0278999999999999999999865 99999999999998765543322 1 2569999
Q ss_pred cCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 442 ~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+++++++|++ |||+++|+.++.||+++++.+.....+|||+|||+|++| ||+
T Consensus 295 ~~~~~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~-~g~ 346 (458)
T PRK09029 295 LPGREVKLVD--------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQ-NGE 346 (458)
T ss_pred CCCCEEEEeC--------------CEEEEecCceeeeeecCccccccccCCCccCCCCcEEEe-CCE
Confidence 9999999987 899999999999999999887665678999999999999 774
No 110
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.7e-44 Score=393.76 Aligned_cols=425 Identities=20% Similarity=0.293 Sum_probs=332.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+...|+.++|.+.++++|+++|+.+. . ..+.++.+||+|+.++++++|.+|.++|+++||+|+|+++|+++|+++.
T Consensus 424 ~~~~Tl~dll~~~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~ 499 (1452)
T PTZ00297 424 AGVRSLGEMWERSVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILE 499 (1452)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 45579999999999999999998642 1 1234578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhh-HHhhhcCcee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-KEAEELGVSC 198 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ 198 (508)
+||+++|+++||+++ +.+++.+++++++++++|++.+....+.+... ..++.+++++....... ......+...
T Consensus 500 lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~~Lr~IIv~d~~~~~~~~~~~~~~~i~~ 574 (1452)
T PTZ00297 500 VACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---RKLETVVYTHSFYDEDDHAVARDLNITL 574 (1452)
T ss_pred HHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---cCCcEEEEECCCcccccccccccCCcce
Confidence 999999999999975 46799999999999999999877776655432 36788888864211000 0000112346
Q ss_pred eeHHHHHhcCCC-CC-CCCCCCCCCeEEEEe---cCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEec
Q 010535 199 FSWEEFLQLGTL-DC-ELPPKKKTNISTIMY---TSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFL 273 (508)
Q Consensus 199 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~i~~---TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (508)
.+|+++...+.. .. ......+++++.|+| ||||||.||||++||+|++.++..+..... ......+|++++++
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~--~~~~~~~D~~Ls~L 652 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV--LPSSFKKHLMVHFT 652 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc--ccCCCCCCEEEEec
Confidence 679999876621 11 122346788999996 999999999999999999999988654310 01345789999999
Q ss_pred ChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 274 PLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 274 pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
|++|+++....+.+++.|+++.. +++..+++.+++++||+++++|.+|+++.+.+..+....+.+.+++++++...+.
T Consensus 653 PLaHI~er~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~ 730 (1452)
T PTZ00297 653 PFAMLFNRVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRS 730 (1452)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999997777788999999863 4789999999999999999999999999999988888888999999999999877
Q ss_pred hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecC--CCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC
Q 010535 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA--PLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV 431 (508)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~--~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~ 431 (508)
.....+ ......++.+.++++++.+|.++|.+++||+ +++ .+... ++.+..+||+||+. +.+..+.
T Consensus 731 ~~~~~g---~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~-----~~l~~-~i~i~~g~glTE~~---~~~~~~~ 798 (1452)
T PTZ00297 731 RLINIH---RRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTS-----FSLLE-HISVCYVPCLREVF---FLPSEGV 798 (1452)
T ss_pred HHHhcC---CCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccC-----hHHhC-CceEEEecceEEee---eecCCCC
Confidence 655543 2345688999999999999999999999984 444 22222 67899999999943 3334333
Q ss_pred cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEc
Q 010535 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQ 504 (508)
Q Consensus 432 ~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d 504 (508)
.. ..|+|+|++++||.++++.+.. +..|||+++ |.++|+.|.+. .+||+..|.+--.|
T Consensus 799 ~~---~~G~PlpgvEvKI~~~~E~~~~----~~~GEIlvr-------~~kdpe~T~e~-~~gW~~dG~L~Iid 856 (1452)
T PTZ00297 799 FC---VDGTPAPSLQVDLEPFDEPSDG----AGIGQLVLA-------KKGEPRRTLPI-AAQWKRDRTLRLLG 856 (1452)
T ss_pred cc---cCCeecCceEEEEcccccccCC----CCCCeEEEE-------ECCChHHHHHh-hCcCccCCeEEEEe
Confidence 22 2399999999999984443322 136999996 45889998874 48999988876655
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.9e-45 Score=380.31 Aligned_cols=383 Identities=21% Similarity=0.245 Sum_probs=296.7
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.++.+.|...|..+|+.+++.+. ++. +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~ 74 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEP---DAP----VRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGL 74 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecC---CCc----eEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 56889999999999999999766 442 67999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHH-------HHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcC
Q 010535 123 NSQAITYVPLYDTLGANAV-------EFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
+++|++++++++..+.+++ ..+++.++++++++++.....+.. .... .
T Consensus 75 ~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~------------------------~ 129 (545)
T PRK07768 75 WMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPV-LEEK------------------------G 129 (545)
T ss_pred HHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhh-hccc------------------------C
Confidence 9999999999988776554 456777899999997754332211 1000 0
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCC-cEEEEecC
Q 010535 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE-DTYFSFLP 274 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~p 274 (508)
.....++++..... ........+++++++|||||||.||+|.++|+++...+......+ .+..+ |++++.+|
T Consensus 130 ~~~~~~~~l~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~p 202 (545)
T PRK07768 130 IRVLTVADLLAADP--IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-----EFDVETDVMVSWLP 202 (545)
T ss_pred CceeehhhhcccCC--CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-----CCCCCCceeEEeCC
Confidence 11233444433221 122344678999999999999999999999999998887766655 55555 89999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHH
Q 010535 275 LAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (508)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (508)
++|..++.. .+.++..|+++++.+. ++..+++.+++++++++..+|..+..+.+.+.....
T Consensus 203 ~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~------------- 269 (545)
T PRK07768 203 LFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAK------------- 269 (545)
T ss_pred CccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhcccc-------------
Confidence 999999885 5578999999988753 678889999999999988777777665442211100
Q ss_pred HHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHh---cCC---ceeeeccccCCCc
Q 010535 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT---SGA---PLTQGYGLTESCS 422 (508)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~---~~~---~l~~~YG~TE~~~ 422 (508)
. ...++ .++|.++++|+++++++.+++.+. +|. .+++.||+||++.
T Consensus 270 ------------------~--~~~~~--------~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~ 321 (545)
T PRK07768 270 ------------------P--GAFDL--------SSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATL 321 (545)
T ss_pred ------------------c--cCCCc--------hheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccce
Confidence 0 00112 279999999999999999999874 455 4999999999987
Q ss_pred ceeeccCCC-------------------------cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccc
Q 010535 423 GCFTSLADV-------------------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 477 (508)
Q Consensus 423 ~~~~~~~~~-------------------------~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~ 477 (508)
.+.....+. ....+++|+|+++++++|+| +++..++. ++.|||+++|+.++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~--g~~Gel~v~~~~~~~ 398 (545)
T PRK07768 322 AVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPP--RGVGVIELRGESVTP 398 (545)
T ss_pred EEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCC--CCEEEEEEccCcccc
Confidence 655432211 11236899999999999999 88876654 489999999999999
Q ss_pred cccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 478 GYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 478 gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
||++++......+.+|||+|||+|++|++|+
T Consensus 399 gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 429 (545)
T PRK07768 399 GYLTMDGFIPAQDADGWLDTGDLGYLTEEGE 429 (545)
T ss_pred cccCCCCCcccccCCCeeeccceEEEecCCE
Confidence 9998766555445788999999999999884
No 112
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.9e-45 Score=377.99 Aligned_cols=375 Identities=20% Similarity=0.220 Sum_probs=291.2
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 155 (508)
+.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++++|..+.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhHhhcCccCCCCccEEEEecCCChhhhH-----HhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCC
Q 010535 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKK-----EAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSG 230 (508)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 230 (508)
+......+.+.... ...++........... ...........++++.... ........+++++++||||
T Consensus 90 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASALPA----GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQ---EPYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhhhc----ccceeecccccccccccccccccccCCCCccCHHHHhccc---CccCCCCCCCceEEEECCC
Confidence 88766554333211 1111111111000000 0000111234566554322 1122335689999999999
Q ss_pred CCCCcceeeechHHHHHH---HHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHH
Q 010535 231 TTGEPKGVVLTNQAIVAE---VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLME 306 (508)
Q Consensus 231 TTG~pK~v~~sh~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~ 306 (508)
|||.||+|.++|.+.... .......+ ++..++++++..|++|..+....+.++..|+++++.+. ++..+++
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIY-----GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQ 237 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhc-----CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHH
Confidence 999999999877654333 22333333 66788999999999999888777777889999988764 8999999
Q ss_pred HhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEE
Q 010535 307 DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQ 386 (508)
Q Consensus 307 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~ 386 (508)
.++++++|.+.++|.+++.++..... ..+..++ +++|
T Consensus 238 ~l~~~~~t~~~~~P~~~~~l~~~~~~-----------------------------------~~~~~~~--------~~l~ 274 (509)
T PRK12406 238 LIERHRITHMHMVPTMFIRLLKLPEE-----------------------------------VRAKYDV--------SSLR 274 (509)
T ss_pred HHHHcCCeEEEccHHHHHHHHhCchh-----------------------------------hcccCCC--------Ccee
Confidence 99999999999999999988642100 0001111 3899
Q ss_pred EEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCc
Q 010535 387 AMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 466 (508)
Q Consensus 387 ~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~G 466 (508)
.++.||+++++++.+++.+.++..+++.||+||++.++.....+....++++|+|+++++++|+| +++..++. |+.|
T Consensus 275 ~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~--g~~G 351 (509)
T PRK12406 275 HVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGRPLPQ--GEIG 351 (509)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCCCCCC--CCce
Confidence 99999999999999999998899999999999999876655444334457899999999999999 77765554 4899
Q ss_pred eEEEecCcccc-cccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 467 EICLRGNTLFS-GYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 467 El~v~g~~v~~-gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
||+++|+.++. ||+++++.+.+.+.+|||+|||+|++|+||+
T Consensus 352 el~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 394 (509)
T PRK12406 352 EIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDADGY 394 (509)
T ss_pred EEEEECCccccccccCCchhcccccCCCCeEEccEEEEcCCce
Confidence 99999998875 9999999888878899999999999999984
No 113
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=7.9e-45 Score=367.97 Aligned_cols=317 Identities=17% Similarity=0.154 Sum_probs=255.6
Q ss_pred eeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEc
Q 010535 78 LTYQEVYDAAIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 78 ~Ty~~l~~~v~~~A~~L~~~gv-~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 156 (508)
+.|+||.++++++|.+|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 7999999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred CCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcc
Q 010535 157 ENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPK 236 (508)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK 236 (508)
....... .... ........++++++++|||||||.||
T Consensus 100 ~~~~~~~----------------~~~~---------------------------~~~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 100 DQLKLSH----------------PPPL---------------------------PSQGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred Ccccccc----------------CCCC---------------------------CccccCCCCCCcEEEEeCCCCCCCCc
Confidence 6432100 0000 00001134578999999999999999
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeE
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTM 315 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~ 315 (508)
+|.+||+++...+......+ .... ++.++.+|++|.+|+...+.+++.|+++++.+. ..........++++++
T Consensus 137 gV~~t~~~l~~~~~~~~~~~-----~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~ 210 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYF-----QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFF 210 (452)
T ss_pred EEEechHHHHHHHHHHHHHh-----cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceE
Confidence 99999999988887766655 3433 467889999999999888889999999998874 2232234445788999
Q ss_pred EEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCC
Q 010535 316 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPL 395 (508)
Q Consensus 316 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l 395 (508)
++++|++++.+++.. ..++ +++|.+++||+++
T Consensus 211 ~~~vP~~l~~l~~~~----------------------------------------~~~l--------~~l~~i~~gG~~l 242 (452)
T PRK07445 211 LSLVPTQLQRLLQLR----------------------------------------PQWL--------AQFRTILLGGAPA 242 (452)
T ss_pred EEehHHHHHHHHhhC----------------------------------------hhhh--------hcceEEEECCccC
Confidence 999999999875410 0011 2899999999999
Q ss_pred CHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC-cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCc
Q 010535 396 PIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNT 474 (508)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~ 474 (508)
++++.+.++. ++.++++.||+||++..+.....+. ....+++|+|+|+++++|++ ++.|||+|+|+.
T Consensus 243 ~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~-----------g~~Gel~v~g~~ 310 (452)
T PRK07445 243 WPSLLEQARQ-LQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA-----------NQTGNITIQAQS 310 (452)
T ss_pred CHHHHHHHHh-cCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC-----------CCcceEEEeCCc
Confidence 9999998876 4899999999999986554433322 22347899999999999972 268999999999
Q ss_pred ccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 475 LFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 475 v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
++.||++++.. .+|||+|||+|++|+||+
T Consensus 311 ~~~gY~~~~~~-----~~g~~~TGDl~~~d~dG~ 339 (452)
T PRK07445 311 LALGYYPQILD-----SQGIFETDDLGYLDAQGY 339 (452)
T ss_pred cchhhcCCccC-----CCCEEECCCEEEEcCCCC
Confidence 99999986432 378999999999999985
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2.4e-44 Score=364.97 Aligned_cols=334 Identities=25% Similarity=0.380 Sum_probs=274.9
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 79 TYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 79 Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++..+++.++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcce
Q 010535 159 KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKG 237 (508)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 237 (508)
..... +. ...+.++.... ...........+++++++|||||||.||+
T Consensus 81 ~~~~~--------------~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 81 LEEKD--------------FQ------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred ccccc--------------ee------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 32110 00 00111111111 01111223456789999999999999999
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHhhHHHHhhhhcCeEEE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFS 317 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~ 317 (508)
|.++|+++...+......+ +..++|++++.+|++|.+++...+.++..|+++++.+.. ..+++.++++++|++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL-----GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc-----CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEE
Confidence 9999999999888877766 778899999999999999998888999999999988643 4999999999999999
Q ss_pred ecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCH
Q 010535 318 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 397 (508)
Q Consensus 318 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~ 397 (508)
++|+++..+++... . . .++|.+++||+++++
T Consensus 203 ~~P~~l~~l~~~~~----------------------------------~---~------------~~l~~~~~~G~~~~~ 233 (436)
T TIGR01923 203 LVPTQLNRLLDEGG----------------------------------H---N------------ENLRKILLGGSAIPA 233 (436)
T ss_pred eHHHHHHHHHhCcC----------------------------------C---C------------CceEEEEECCCCCCH
Confidence 99999988864100 0 0 279999999999999
Q ss_pred HHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccc
Q 010535 398 HVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 477 (508)
Q Consensus 398 ~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~ 477 (508)
++.++++. .|..+++.||+||++..++....+......++|+|+++++++|.. ++.. +.|||+++|+.++.
T Consensus 234 ~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~-------~~Gel~v~~~~~~~ 304 (436)
T TIGR01923 234 PLIEEAQQ-YGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKV-DNKE-------GHGEIMVKGANLMK 304 (436)
T ss_pred HHHHHHHH-hCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEe-CCCC-------CceEEEEECCccch
Confidence 99999876 499999999999998766654443322223599999999999955 2221 57999999999999
Q ss_pred cccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 478 GYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 478 gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
||+++++.+...+.+|||+|||+|++|+||+
T Consensus 305 gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~ 335 (436)
T TIGR01923 305 GYLYQGELTPAFEQQGWFNTGDIGELDGEGF 335 (436)
T ss_pred hhCCChhhhhhhhcCCCeeccceEEEcCCCC
Confidence 9999888887777889999999999999984
No 115
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=3.8e-44 Score=341.01 Aligned_cols=396 Identities=16% Similarity=0.167 Sum_probs=302.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
-...++.++|.++++++|+++|+++. +.. +++||+|+.+.++++|+.|+.+|++.||.||++++|.++++.++
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~---~~~----~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lW 146 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYE---GPF----QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALW 146 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEe---CCC----ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHH
Confidence 45689999999999999999999998 432 68999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
++++++|++...||+++..+.|.|.++.++++++|++.+....+.+..+......-.++..+..... .+..
T Consensus 147 lGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~---------~g~~ 217 (649)
T KOG1179|consen 147 LGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVP---------DGIE 217 (649)
T ss_pred HhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCC---------chHH
Confidence 9999999999999999999999999999999999999988877766633322222233333222211 1122
Q ss_pred eHHHHHhcC-CCC---CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh
Q 010535 200 SWEEFLQLG-TLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (508)
Q Consensus 200 ~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 275 (508)
++...++.. ..+ ......+..++++.+|||||||.||+.+++|..+......+...+ +++.+|+++.++|+
T Consensus 218 ~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-----g~~~~DvvY~~lPL 292 (649)
T KOG1179|consen 218 SLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-----GMTADDVVYTTLPL 292 (649)
T ss_pred HHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEcchh
Confidence 333333333 222 223345678899999999999999999999999988888776666 89999999999999
Q ss_pred HHHHHHHH-HHHHHhcCcEEEEec-CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 276 AHIYDQII-ETHCIHKGCSIGFWR-GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 276 ~~~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
+|..|.+. +..|+..|+++++-. ++..++|+.+.+|++|++...-.+.+.|++..+...+
T Consensus 293 YHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~e------------------ 354 (649)
T KOG1179|consen 293 YHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEE------------------ 354 (649)
T ss_pred HHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhh------------------
Confidence 99999886 778999999999987 5999999999999999999999999998753211110
Q ss_pred hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC-ceeeeccccCCCcceeeccCCCc
Q 010535 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVF 432 (508)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~~ 432 (508)
-.+++|..+.- -+.+++.+.|.++||+ .|.+.||+||..... .+.....
T Consensus 355 ---------------------------r~HkVRla~GN--GLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~-~N~d~~v 404 (649)
T KOG1179|consen 355 ---------------------------RQHKVRLAYGN--GLRPDIWQQFVKRFGIIKIGEFYGATEGNSNL-VNYDGRV 404 (649)
T ss_pred ---------------------------cCceEEEEecC--CCCchHHHHHHHHcCCCeEEEEeccccCccee-eeecCcc
Confidence 01467766654 4789999999999987 599999999976543 3333221
Q ss_pred ccccccccc------cCCeEE---------EEeecCCCCccCCCCCCCceEEEec--Ccc---cccccCCcccccccc--
Q 010535 433 NMIGTVGVP------MTTVEA---------RLESVPEMGYDALSSVPRGEICLRG--NTL---FSGYYKRPDLTEEVI-- 490 (508)
Q Consensus 433 ~~~~s~G~p------~~~~~~---------~i~d~~~~~~~~~~~~~~GEl~v~g--~~v---~~gY~~~~~~~~~~~-- 490 (508)
|.+|+. +--.++ -|.| ++|--.++.+||.|.+.-+- ..- |.||.++.+.++++.
T Consensus 405 ---GA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd-~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~r 480 (649)
T KOG1179|consen 405 ---GACGFMSRLLKLLYPFRLIKVDPETGEPIRD-SQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLR 480 (649)
T ss_pred ---ccccchhhhhhhccceEEEEecCCCCceeec-CCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHH
Confidence 333321 111111 1233 55555667788999775442 333 789999777765543
Q ss_pred ---c--CCccccCcEEEEcCCCC
Q 010535 491 ---V--DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 491 ---~--~gw~~TGDlg~~d~~G~ 508 (508)
. |-||.|||+-.+|+.||
T Consensus 481 DVFkkGD~~f~tGDlLv~D~~Gy 503 (649)
T KOG1179|consen 481 DVFKKGDVYFNTGDLLVADELGY 503 (649)
T ss_pred hhhccCcEEEeeCcEEEEecCCc
Confidence 3 34999999999999996
No 116
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=5.4e-44 Score=367.61 Aligned_cols=343 Identities=17% Similarity=0.130 Sum_probs=249.6
Q ss_pred cCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh------hhHhhcCccCCCCccEEEEecC
Q 010535 109 GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI------PSILSCLPRCCLYLKTIVSFAN 182 (508)
Q Consensus 109 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~i~~~~ 182 (508)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... ..+..... . ...+.++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~ 78 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVE-A-APAKAIVLPAA 78 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhh-c-ccceEEEEecc
Confidence 5899999999999999999999999999999999999999999999986421 11111111 0 11222222211
Q ss_pred CChhhhHHhhhcCceeeeHHHHHhcCC-------CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhh
Q 010535 183 VSSSQKKEAEELGVSCFSWEEFLQLGT-------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 255 (508)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~ 255 (508)
..... .........++++..... .........++++++|+|||||||.||||++||++++.........
T Consensus 79 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 79 GEPVA----VPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred CcccC----CccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 10000 000001234555542210 0111112356899999999999999999999999988766554433
Q ss_pred hhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHh
Q 010535 256 FVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (508)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 333 (508)
+ .+..+|++++.+|++|.+++..++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..|++...
T Consensus 155 ~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~-- 227 (499)
T PLN03051 155 M-----DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGA-- 227 (499)
T ss_pred c-----CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCc--
Confidence 3 67788999999999999998777889999999998863 78899999999999999999999998854100
Q ss_pred hhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc--CCce
Q 010535 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPL 411 (508)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~--~~~l 411 (508)
......+++ +||.+++||+++++++.+++++.+ +..+
T Consensus 228 ---------------------------------~~~~~~~~~--------~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~ 266 (499)
T PLN03051 228 ---------------------------------FAMEGLDWS--------KLRVFASTGEASAVDDVLWLSSVRGYYKPV 266 (499)
T ss_pred ---------------------------------cccccCCch--------hheEEEecCCCCCHHHHHHHHHhcccccee
Confidence 001111222 799999999999999998887733 4789
Q ss_pred eeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcc--cccccCCccccccc
Q 010535 412 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTL--FSGYYKRPDLTEEV 489 (508)
Q Consensus 412 ~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v--~~gY~~~~~~~~~~ 489 (508)
++.||+||++..+...........+++|+|.++++++|+| +++..++.|.++.|||+|+||.+ +.||++++. + +.
T Consensus 267 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~-~~ 343 (499)
T PLN03051 267 IEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-D-KV 343 (499)
T ss_pred EeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccccCCcc-c-ce
Confidence 9999999987544432222222347999999999999999 88887776655689999999977 579997653 3 33
Q ss_pred ccCC----------ccccCcEEEEcCCCC
Q 010535 490 IVDG----------WFHTGDIGEWQPMEL 508 (508)
Q Consensus 490 ~~~g----------w~~TGDlg~~d~~G~ 508 (508)
+.+| ||+|||+|++|+||+
T Consensus 344 ~~~g~~~~~~~~~~~~~TGDlg~~d~dG~ 372 (499)
T PLN03051 344 YYKGMPMYGSKGMPLRRHGDIMKRTPGGY 372 (499)
T ss_pred eeecCCccccCCcceeecCCeEEECCCCc
Confidence 4344 689999999999996
No 117
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=352.14 Aligned_cols=404 Identities=19% Similarity=0.240 Sum_probs=317.6
Q ss_pred CCCCCHHHH-HHHHHHh-CCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH
Q 010535 40 AGLESPWQF-FCDSAKR-IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (508)
Q Consensus 40 ~~~~t~~~~-l~~~a~~-~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~ 117 (508)
....|+... ++++.+. .++.+++++. +...+....+||.|+.+++.++|..|.+.|+++||+|++++|+.+++++
T Consensus 60 g~~ln~~~n~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~i 136 (626)
T KOG1175|consen 60 GAFLNACYNCLDRHIKEKGGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVI 136 (626)
T ss_pred cchhhhhHhhhhhhhhhcCCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHH
Confidence 455555555 4444333 4889999887 4443333459999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh---------cCc---cCCCCccEEEEecCCCh
Q 010535 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS---------CLP---RCCLYLKTIVSFANVSS 185 (508)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~---------~~~---~~~~~~~~~i~~~~~~~ 185 (508)
+++||.++|++..++...+++.++...++.++++++|+.+......+. +.. .........+.+....
T Consensus 137 a~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~- 215 (626)
T KOG1175|consen 137 AMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN- 215 (626)
T ss_pred HHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc-
Confidence 999999999999999999999999999999999999998753322111 110 0000101111111110
Q ss_pred hhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHH-HHHHhhhhhhhhccccCC
Q 010535 186 SQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV-AEVLSVDQMFVVTGKVCS 264 (508)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~-~~~~~~~~~~~~~~~~~~ 264 (508)
....|+++.........+...+.+++.+|+|||||||.||++.+++...+ ..+......+ .+.
T Consensus 216 -----------~d~~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~-----d~q 279 (626)
T KOG1175|consen 216 -----------RDLFWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF-----DLQ 279 (626)
T ss_pred -----------ccccHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec-----cCC
Confidence 12356666555544555777889999999999999999999999877644 4444444433 889
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC---CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChh
Q 010535 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (508)
Q Consensus 265 ~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 340 (508)
++|+++++..+.|+.|.+. .+.+|+.|+++++... ++..+++.+.+|++|++++.|+.++.|.+..+..
T Consensus 280 ~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~------- 352 (626)
T KOG1175|consen 280 PSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQED------- 352 (626)
T ss_pred CcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcccc-------
Confidence 9999999999999999886 6679999999999864 8899999999999999999999999875422111
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC-ceeeeccccC
Q 010535 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTE 419 (508)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE 419 (508)
....++ .+||++.++|++++++..+++.+.++. +|.+.||+||
T Consensus 353 ----------------------------~~~~~~--------~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtE 396 (626)
T KOG1175|consen 353 ----------------------------VTSYSL--------KSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTE 396 (626)
T ss_pred ----------------------------cccccc--------ceEEEEeecCccCCcchHHHHHHhcCccchhhceeeec
Confidence 111111 279999999999999999999999988 6999999999
Q ss_pred CCcceeeccCCC-cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec--C-cccccccCCcccccccc-c--C
Q 010535 420 SCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--N-TLFSGYYKRPDLTEEVI-V--D 492 (508)
Q Consensus 420 ~~~~~~~~~~~~-~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g--~-~v~~gY~~~~~~~~~~~-~--~ 492 (508)
+|+.++...... ..++++.|.|.+|+.+.|.| ++|+..+... +.|+|+++. | +.+++|++|++...... . .
T Consensus 397 tG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~p 474 (626)
T KOG1175|consen 397 TGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFP 474 (626)
T ss_pred cCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCC
Confidence 999999887777 66679999999999999999 7787766644 799999998 3 77899999998433333 3 7
Q ss_pred CccccCcEEEEcCCCC
Q 010535 493 GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 493 gw~~TGDlg~~d~~G~ 508 (508)
|+|.|||.|++|+|||
T Consensus 475 g~y~tGD~~~rd~dGY 490 (626)
T KOG1175|consen 475 GYYFTGDGGRRDEDGY 490 (626)
T ss_pred ceEEecCceEEcCCce
Confidence 8999999999999997
No 118
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-43 Score=382.70 Aligned_cols=387 Identities=14% Similarity=0.128 Sum_probs=276.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|++.++++|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+|+++|++++++++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~---~------~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~ 514 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD---G------RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAI 514 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34568999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++||+|. +++.++++.++++++|++......+... ...+++++......... .......
T Consensus 515 lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~-------~~~iiv~~~~~~~~~~~--~~~~~~~ 582 (994)
T PRK07868 515 AALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL-------PGRVLVLGGGESRDLDL--PDDADVI 582 (994)
T ss_pred HHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-------CceEEEecCCccccccC--Ccchhhh
Confidence 9999999999999984 6899999999999999987666544321 12344443211100000 0000011
Q ss_pred eHHHHHhcC-CCC--CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChH
Q 010535 200 SWEEFLQLG-TLD--CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (508)
Q Consensus 200 ~~~~~~~~~-~~~--~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 276 (508)
.++++.... ..+ ....+..++++++|+|| ||||.||++.++|.+...........+ .+..+|++++.+|++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-----~l~~~d~~L~~~Pl~ 656 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-----ALDRRDTVYCLTPLH 656 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-----CCCCCCeEEEecChH
Confidence 111111110 000 00112235889999999 578888888888877655444433333 677899999999999
Q ss_pred HHHHHHHHH-HHHhcCcEEEEec-CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 277 HIYDQIIET-HCIHKGCSIGFWR-GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 277 ~~~g~~~~~-~~l~~G~~~v~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
|.+++...+ .++..|+++++.+ +++..+++.|+++++|+++++|++++.|++...
T Consensus 657 h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~----------------------- 713 (994)
T PRK07868 657 HESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPA----------------------- 713 (994)
T ss_pred HHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC-----------------------
Confidence 999998655 4555566666655 399999999999999999999999998864100
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC-CceeeeccccCCCcceeeccCCCcc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADVFN 433 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~~ 433 (508)
....++ +++|.++. +.+++++.+++.+.++ ..+++.||+||++.... ... ..
T Consensus 714 --------------~~~~~~--------~slr~~~g--~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~-~~~--~~ 766 (994)
T PRK07868 714 --------------FVLHGN--------HPVRLFIG--SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLA-NVS--GA 766 (994)
T ss_pred --------------CccCCC--------CceEEEec--CCCCHHHHHHHHHHhCchheeeeeeccccccccc-ccC--CC
Confidence 000011 37888763 3499999999999886 79999999999875433 221 22
Q ss_pred cccccccccCCe-EEEEeec----------CCCCccCCCCCCCceEEEecCcccccccCCcccc--cccc--cCCccccC
Q 010535 434 MIGTVGVPMTTV-EARLESV----------PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT--EEVI--VDGWFHTG 498 (508)
Q Consensus 434 ~~~s~G~p~~~~-~~~i~d~----------~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~--~~~~--~~gw~~TG 498 (508)
..+++|+|+|++ +++|.+. ++|....+..|+.|||+++|+.. + +++.+ ...| .+|||+||
T Consensus 767 ~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TG 841 (994)
T PRK07868 767 KIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTE 841 (994)
T ss_pred CCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEecc
Confidence 348999999997 6766420 33311223456999999999864 2 34332 2234 37999999
Q ss_pred cEEEEcCCCC
Q 010535 499 DIGEWQPMEL 508 (508)
Q Consensus 499 Dlg~~d~~G~ 508 (508)
|+|++|+||+
T Consensus 842 Dlg~~d~dG~ 851 (994)
T PRK07868 842 YLFRRDDDGD 851 (994)
T ss_pred ceEEEcCCCC
Confidence 9999999996
No 119
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-40 Score=334.01 Aligned_cols=298 Identities=17% Similarity=0.181 Sum_probs=250.9
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 155 (508)
+.+||+||.++++++|..|. .|+++|++|+++++|+++++++++|++++|++++||++..+.+++..+++.++++++++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 57999999999999999985 68999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCc
Q 010535 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEP 235 (508)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~p 235 (508)
++.... .. ......++++++++|||||||.|
T Consensus 86 ~~~~~~------------------~~-------------------------------~~~~~~~~~~~~i~~TSGtTG~P 116 (414)
T PRK08308 86 GESDFT------------------KL-------------------------------EAVNYLAEEPSLLQYSSGTTGEP 116 (414)
T ss_pred cCcccc------------------cc-------------------------------cCCCCCCCCceEEEECCCCCCCC
Confidence 763100 00 00112457899999999999999
Q ss_pred ceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcC
Q 010535 236 KGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKP 313 (508)
Q Consensus 236 K~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~ 313 (508)
|+|.++|+++...+..+...+ ....+++++..+|++|.+|+. ..+.++..|+++++.+. ++..+++.++++++
T Consensus 117 Kgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~ 191 (414)
T PRK08308 117 KLIRRSWTEIDREIEAYNEAL-----NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQ 191 (414)
T ss_pred cEEEEehHhHHHHHHHHHHhh-----CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCC
Confidence 999999999999888877665 667889999999999999986 47789999999988874 89999999999999
Q ss_pred eEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecC
Q 010535 314 TMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA 393 (508)
Q Consensus 314 t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~ 393 (508)
|+++++|.++..+.+... . + .+++.++++|+
T Consensus 192 t~~~~~P~~~~~l~~~~~----------------------------------~---~------------~~l~~~~~~G~ 222 (414)
T PRK08308 192 HILYAVPLMLHILGRLLP----------------------------------G---T------------FQFHAVMTSGT 222 (414)
T ss_pred eEEEcCHHHHHHHHhcCC----------------------------------c---c------------ccccEEEEccC
Confidence 999999999998754210 0 0 15788999999
Q ss_pred CCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecC
Q 010535 394 PLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN 473 (508)
Q Consensus 394 ~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~ 473 (508)
++++++.+++++. +..+++.||+||++.+.... + ...++++|+|+|++++++.+ ++ ++.|||++++.
T Consensus 223 ~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~-~~~~~~~G~p~~~~~~~~~~-~~--------~~~gel~v~~~ 289 (414)
T PRK08308 223 PLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICP--D-MKSHLDLGNPLPHVSVSAGS-DE--------NAPEEIVVKMG 289 (414)
T ss_pred CCCHHHHHHHHHh-CChhhhccCccccCCeeecC--C-CCCCCccCccCCCeEEEEec-CC--------CCCceEEEEcC
Confidence 9999999999886 67899999999998644321 1 12347899999999999876 32 35799999852
Q ss_pred cccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 474 TLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 474 ~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
++||+|||+|++|+||+
T Consensus 290 ------------------~~~~~TGDl~~~~~dg~ 306 (414)
T PRK08308 290 ------------------DKEIFTKDLGYKSERGT 306 (414)
T ss_pred ------------------CceEECCceEEECCCcc
Confidence 57999999999999984
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-34 Score=305.98 Aligned_cols=380 Identities=22% Similarity=0.249 Sum_probs=303.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+...++.+.|...+...|++.|+.+. + .++||+|+..+++++|..|.+.|+++++.|+++.+.++++++.+
T Consensus 224 ~~~~~i~~~f~~~a~~~p~~~a~~~~---~------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~ 294 (642)
T COG1020 224 PLRLTIHLLFEEQAATTPDAVALVRG---G------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVAL 294 (642)
T ss_pred CccchHHHHHHHHHHhCCCceeEecC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHH
Confidence 44578999999999999999998764 2 47999999999999999999999999999999998899999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+|++++|+.++|++|..+.+++..+++.++++.+++......... .... +..+...
T Consensus 295 l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~--------------- 350 (642)
T COG1020 295 LAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV--------GLPG-LALDDAL--------------- 350 (642)
T ss_pred HHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccc--------cCCc-ccccccc---------------
Confidence 999999999999999999999999999999999998833221100 0000 0110000
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
+. .............++.+|++|||||||.||||..+|+++..........+ .....|+++...++.+..
T Consensus 351 -~~----~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-----~~~~~d~~l~~~s~~fD~ 420 (642)
T COG1020 351 -SE----IPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF-----GLDADDRVLALASLSFDA 420 (642)
T ss_pred -cc----CCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc-----CCCcccEEeecCCcccch
Confidence 00 00000111233558899999999999999999999999999777776665 778888999999998878
Q ss_pred HHHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhh
Q 010535 280 DQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (508)
....++.++..|+.+++... ++..+...+.++++|++..+|.++..++...........
T Consensus 421 ~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~----------------- 483 (642)
T COG1020 421 SVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISP----------------- 483 (642)
T ss_pred hHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCC-----------------
Confidence 88889999999999998864 889999999999999999999999988652000000000
Q ss_pred hccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc--CCceeeeccccCCCcceeeccCCCcc
Q 010535 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGLTESCSGCFTSLADVFN 433 (508)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~ 433 (508)
...+|.+++||+.++.++...+.... ...+.+.||+||+.............
T Consensus 484 --------------------------~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~ 537 (642)
T COG1020 484 --------------------------CERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAEL 537 (642)
T ss_pred --------------------------cccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEccccc
Confidence 01489999999999999999888765 46899999999966655443322211
Q ss_pred c-ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccC-CccccCcEEEEcCCCC
Q 010535 434 M-IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~-~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~-gw~~TGDlg~~d~~G~ 508 (508)
. ...+|+|+++..+.|.| .....+|.+ ..||+++.|.++..||+++++.+.+.|.. ++|+|||+++++.||.
T Consensus 538 ~~~~piG~p~~n~~~~ild-~~~~~~p~g--v~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~ 611 (642)
T COG1020 538 ESRVPIGRPVANTQLYILD-QGLRPLPLG--VPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGA 611 (642)
T ss_pred CCCCCcceeeCCCeEEEEC-CCCCcCCCC--CCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCe
Confidence 1 35799999999999999 778877776 78999999999999999999999999955 4999999999999984
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=4.3e-28 Score=239.10 Aligned_cols=210 Identities=28% Similarity=0.424 Sum_probs=169.0
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEE
Q 010535 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (508)
Q Consensus 217 ~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~ 296 (508)
..++++++++|||||||.||+|.++|+++...+......+ ...++++..+|++|..++...+.++..|+++++
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-------~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~ 104 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL-------GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVE 104 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc-------CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEe
Confidence 4468999999999999999999999999988877654432 345788999999999999888889999999887
Q ss_pred ec----CCHhhHHHHhhhhc--CeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhh
Q 010535 297 WR----GDVRYLMEDIQELK--PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLD 370 (508)
Q Consensus 297 ~~----~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (508)
.. +++..+++.+++++ .++...+|..+..++.... .
T Consensus 105 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~--------------------------------------~ 146 (358)
T PRK07824 105 LDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA--------------------------------------A 146 (358)
T ss_pred cCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc--------------------------------------c
Confidence 32 38999999999998 5566667877665532100 0
Q ss_pred HHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEe
Q 010535 371 SLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLE 450 (508)
Q Consensus 371 ~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~ 450 (508)
..++ .++|.+++||+++++++.+++.+. ++.+++.||+||++..+ ...|+|+++++++|.
T Consensus 147 ~~~~--------~~l~~i~~gG~~l~~~~~~~~~~~-~~~v~~~YG~TE~~~~~-----------~~~G~~~~g~~v~i~ 206 (358)
T PRK07824 147 TAAL--------AELDAVLVGGGPAPAPVLDAAAAA-GINVVRTYGMSETSGGC-----------VYDGVPLDGVRVRVE 206 (358)
T ss_pred cCCc--------ccceEEEECCCCCCHHHHHHHHhc-CCcEEecccCCccCCCc-----------CcCceeCCCCEEEec
Confidence 0011 289999999999999999998864 99999999999987543 235899999999985
Q ss_pred ecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 451 SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 451 d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
+ |||+++|+.++.||+++++.. .| .+|||+|||+|++ ++|+
T Consensus 207 ~--------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~ 248 (358)
T PRK07824 207 D--------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGV 248 (358)
T ss_pred C--------------CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCE
Confidence 4 999999999999999988743 34 6789999999999 6663
No 122
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.94 E-value=2.8e-25 Score=225.49 Aligned_cols=403 Identities=12% Similarity=0.092 Sum_probs=278.3
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.++.++|++++..+||.+|+... +..+...+++||++|..+|.+++.+|... -++.||.|+++++++.|++++++|
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~ 846 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYA 846 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHH
Confidence 67999999999999999999998 88888889999999999999999999987 489999999999999999999999
Q ss_pred HHhcCCEEEeccCCC------CHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCC---CCccEEEEecCCChhhhHHhh
Q 010535 122 CNSQAITYVPLYDTL------GANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC---LYLKTIVSFANVSSSQKKEAE 192 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~ 192 (508)
|+.+|.+++|+.|.. ....+..+++.+++.+++++......+...-.... .-+..++.+.+......
T Consensus 847 Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~---- 922 (1363)
T KOG3628|consen 847 CLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIR---- 922 (1363)
T ss_pred HHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhh----
Confidence 999999999998864 33467788899999999999875544322111000 11112222222111000
Q ss_pred hcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEe
Q 010535 193 ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (508)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (508)
.....+ ........+.-.+.+.+|++-+.--++|.-.++.++|..+++.++..+..+ .+.+..-++.+
T Consensus 923 ------k~~~~~-~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~-----~l~~~rpl~~~ 990 (1363)
T KOG3628|consen 923 ------KRKKNI-KKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC-----QLYKSRPLLGC 990 (1363)
T ss_pred ------hhhhhh-hccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH-----ccccCCceEEE
Confidence 000000 011111222334668899999999999999999999999999999999998 66677777777
Q ss_pred cChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHH
Q 010535 273 LPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (508)
Q Consensus 273 ~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (508)
.+.+.+.|+. +++..++.|.+.++.+. ++..++..+.+|++.-++.+-..+..+.+.+..+.+...+
T Consensus 991 ~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~------- 1063 (1363)
T KOG3628|consen 991 SSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSK------- 1063 (1363)
T ss_pred ecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhh-------
Confidence 7777777776 68899999999877753 8999999999999999999888888876654433221110
Q ss_pred HHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc---CC---ceeeeccccCC
Q 010535 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGLTES 420 (508)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~---~~---~l~~~YG~TE~ 420 (508)
..... +-..++..-+.....+.+.|.+.+ |. .+--.|+.-=-
T Consensus 1064 ------------------------------~gnn~--s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~N 1111 (1363)
T KOG3628|consen 1064 ------------------------------RGNNT--SSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVN 1111 (1363)
T ss_pred ------------------------------hhccc--ccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCC
Confidence 00000 113344445555556666655544 22 23333443322
Q ss_pred CcceeeccCCC-------c-------------------ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCc
Q 010535 421 CSGCFTSLADV-------F-------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNT 474 (508)
Q Consensus 421 ~~~~~~~~~~~-------~-------------------~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~ 474 (508)
-.++.....+. + -.....|...+++++.|++ |+.. .|++.|+.||||+.|.+
T Consensus 1112 p~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Ivn-PEtk-~pc~dge~GEIW~~S~h 1189 (1363)
T KOG3628|consen 1112 PFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVN-PETK-GPCRDGELGEIWVNSAH 1189 (1363)
T ss_pred hHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeC-Cccc-cccccCCcceEEecccc
Confidence 22222211100 0 0012358888999999999 6665 56667799999999999
Q ss_pred ccccccCCcc-cccccc----------cCCccccCcEEEEcC
Q 010535 475 LFSGYYKRPD-LTEEVI----------VDGWFHTGDIGEWQP 505 (508)
Q Consensus 475 v~~gY~~~~~-~~~~~~----------~~gw~~TGDlg~~d~ 505 (508)
-+.+|++..+ .....| ..+|.||||+|++..
T Consensus 1190 nA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~ 1231 (1363)
T KOG3628|consen 1190 NASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRR 1231 (1363)
T ss_pred ccccccccCchhhhhhhhhhccccccccccceeeeeeeeeee
Confidence 8888875321 222222 134999999999753
No 123
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=1.2e-25 Score=204.53 Aligned_cols=222 Identities=13% Similarity=0.070 Sum_probs=164.1
Q ss_pred HHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhHHHHHHHHHhcCC
Q 010535 49 FCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAI 127 (508)
Q Consensus 49 l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~ 127 (508)
|...++++|+++|+++. ++.++..+.+||+||.++++++|++|++ .|+++||+|+++++|+++++++++|++++|+
T Consensus 2 ~~~~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 56788899999999864 3322122579999999999999999998 7999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHhc
Q 010535 128 TYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQL 207 (508)
Q Consensus 128 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (508)
+++|++ .++++++|++.+....+. . . +.++.+......... .......+.++.+.+..
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 136 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAA-G-----S--GEVVALSLDPLGRRV-AGELPPGVIDFAPEVRV 136 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcc-c-----C--CceEEEeccccccCC-CCCCCCcccchhhhhhc
Confidence 999996 689999999987766532 1 1 222332110000000 00001122456665553
Q ss_pred CCCCCCCC-CCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH-HHH
Q 010535 208 GTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IET 285 (508)
Q Consensus 208 ~~~~~~~~-~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~ 285 (508)
......+. ...++|++.++||||+ +|.+++.+. ..+ ++..+|+++ .+|++|.+|+. .++
T Consensus 137 ~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-----~l~~~D~~l-~~Pl~H~~gl~~~~~ 197 (227)
T TIGR03089 137 HGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-----GLPPGDRVL-VLAWTDLEDFLATLL 197 (227)
T ss_pred cCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-----CCCCCCeEE-ecCCCchHHHHHHHH
Confidence 32222222 3466899999999986 666666554 222 678899999 99999999997 478
Q ss_pred HHHhcCcEEEEec-CCHhhHHHHhhhhcCe
Q 010535 286 HCIHKGCSIGFWR-GDVRYLMEDIQELKPT 314 (508)
Q Consensus 286 ~~l~~G~~~v~~~-~~~~~~~~~i~~~~~t 314 (508)
.+++.|+++++++ +++..+++.|+++++|
T Consensus 198 ~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 198 APLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 9999999999886 5999999999999987
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.92 E-value=4.1e-24 Score=215.17 Aligned_cols=226 Identities=17% Similarity=0.131 Sum_probs=163.3
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH-HHHHHHHhcCcEEEE
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ-IIETHCIHKGCSIGF 296 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~~~~l~~G~~~v~ 296 (508)
..++++.+++||||||.||+|.++|.++..........+.. .+...+|++++..++.+..+. ...+.++..|++++.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~--~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRA--AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHH--cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 45678889999999999999999999987765544333221 266788998887665443332 235567788988887
Q ss_pred ecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHH
Q 010535 297 WRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (508)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (508)
.+. +++.+++.|+++++|+++++|+++..|++.+...... +.
T Consensus 151 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~-------------------------------------~~ 193 (422)
T TIGR02155 151 ISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGID-------------------------------------PA 193 (422)
T ss_pred cCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCC-------------------------------------cc
Confidence 654 7899999999999999999999999987643321000 00
Q ss_pred HHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccccccccccc--CCeEEEEeecC
Q 010535 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM--TTVEARLESVP 453 (508)
Q Consensus 376 ~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~--~~~~~~i~d~~ 453 (508)
..++|.+++||+++++++.+.+++.||+++++.||+||+++......... ...|.++ +++.++|+|.+
T Consensus 194 ------~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~----~~~g~~~~~~~~~~eivd~~ 263 (422)
T TIGR02155 194 ------QTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVE----TQDGLHIWEDHFYPEIIDPH 263 (422)
T ss_pred ------cCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccc----cCCCceEecCeeEEEEECCC
Confidence 02799999999999999999999999999999999999853221111100 1123333 35777899833
Q ss_pred CCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCC
Q 010535 454 EMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM 506 (508)
Q Consensus 454 ~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~ 506 (508)
++..++ +|+.|||++++. +.+.|..+||+|||+|+++++
T Consensus 264 ~g~~v~--~Ge~Gelvvt~~------------~~~~~p~~ry~TGDl~~~~~~ 302 (422)
T TIGR02155 264 TGEVLP--DGEEGELVFTTL------------TKEALPVIRYRTRDLTRLLPG 302 (422)
T ss_pred CCCCCC--CCCeeEEEEecC------------CccccceeeEEcCcEEEEECC
Confidence 455444 558999999973 334556789999999999875
No 125
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.89 E-value=1.7e-22 Score=198.58 Aligned_cols=191 Identities=16% Similarity=0.172 Sum_probs=144.2
Q ss_pred CCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccC--CCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEE
Q 010535 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGF 296 (508)
Q Consensus 220 ~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~ 296 (508)
+..++++|||||||.||+|.++|+++...+..+...+ .. ...+++++.+|++|.+|+.+ .+.++..|+++++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~ 169 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-----GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQ 169 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-----CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEe
Confidence 4578999999999999999999999998888776655 33 34468999999999999864 6778899999988
Q ss_pred ecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHH
Q 010535 297 WRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (508)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (508)
.+. ++..+++.++.+ |+++++|.+++.+.+.. .++
T Consensus 170 ~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~-----------------------------------------~~l- 205 (386)
T TIGR02372 170 LAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD-----------------------------------------YRL- 205 (386)
T ss_pred cCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC-----------------------------------------cCC-
Confidence 764 778888887754 89999999999885410 001
Q ss_pred HHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCC-ceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCC
Q 010535 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPE 454 (508)
Q Consensus 376 ~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~ 454 (508)
++++. ++||+++++++.+.+++. +. .+++.||+||+++++..... +..|+++|+.++++ + +
T Consensus 206 -------~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~~------~~~~~~~p~~~~~~-~--~ 267 (386)
T TIGR02372 206 -------PGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREAP------DDPFRLLPDLACFA-D--T 267 (386)
T ss_pred -------Cccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccCC------CCCcccCCCccccC-C--C
Confidence 25665 678999999999999886 64 79999999999876543211 34677888776543 1 1
Q ss_pred CCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 455 MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 455 ~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+. + .|+ ..|++|||+|++|++|+
T Consensus 268 ~~----------~---~g~------------------~~~~~tgD~g~~d~~G~ 290 (386)
T TIGR02372 268 LS----------S---AGL------------------ARRLDLQDRLAWDKDGG 290 (386)
T ss_pred cc----------C---CCc------------------cceeecCceEEEcCCCc
Confidence 11 0 011 12689999999999985
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.86 E-value=2.8e-20 Score=187.53 Aligned_cols=224 Identities=18% Similarity=0.132 Sum_probs=156.8
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcEEE
Q 010535 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIG 295 (508)
Q Consensus 217 ~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~~l~~G~~~v 295 (508)
...++++.+.+||||||.||+|.+||.++..........+.. .++..+|+++...+..+..+.. ..+.+...|++++
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~--~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi 160 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVS--QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSII 160 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHH--cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEE
Confidence 345678899999999999999999999988776665544322 2677889999998887765554 3455677888765
Q ss_pred EecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHH
Q 010535 296 FWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (508)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (508)
.. ......++.+++++++.+.++|+.+..+++.+..... +. ..
T Consensus 161 ~~-~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~----------------------------------~~-~~- 203 (445)
T TIGR03335 161 PE-GKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGI----------------------------------DP-AE- 203 (445)
T ss_pred cC-CchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCC----------------------------------Cc-cc-
Confidence 33 3445678999999999999999988877654322110 00 00
Q ss_pred HHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccccccccccc--CCeEEEEeecC
Q 010535 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM--TTVEARLESVP 453 (508)
Q Consensus 376 ~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~--~~~~~~i~d~~ 453 (508)
.++|.+++||+++++++.+++++.+|+++++.||+||++. +..... ..|..+ +.+.+.|+| +
T Consensus 204 -------~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~-~~~c~~-------~~g~h~~~d~~~vEIvD-p 267 (445)
T TIGR03335 204 -------SSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTM-CGECQA-------VAGLHVPEDLVHLDVYD-P 267 (445)
T ss_pred -------CcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhh-eEEecC-------CCCccccCCceEEEEEc-C
Confidence 2799999999999999999999999999999999999863 221111 123333 457899999 6
Q ss_pred CCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEc
Q 010535 454 EMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQ 504 (508)
Q Consensus 454 ~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d 504 (508)
+++. ++.+|+.|||++++-.... +.+.+.==-|+|||++++.
T Consensus 268 ~~~~-~vp~Ge~GELvvT~L~~~~--------~r~~~PliRYrtgD~~~~~ 309 (445)
T TIGR03335 268 RHQR-FLPDGECGRIVLTTLLKPG--------ERCGSLLINYDTEDTTVVI 309 (445)
T ss_pred CCCC-CCcCCCceEEEEEecCCCC--------ccCCceEEEeecCceEEEe
Confidence 6653 3346699999998732100 0000000138999999863
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=7.4e-17 Score=169.81 Aligned_cols=332 Identities=13% Similarity=0.062 Sum_probs=207.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
.+.++...+.+.+...|.+.+..+.+. ....+....+||++....++.+++.|...|...|+.|++++..+.++++..+
T Consensus 34 ~~g~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~ 112 (1032)
T KOG1178|consen 34 FMGTLEDSFRRELAEAPENTGHVIIPT-ASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVF 112 (1032)
T ss_pred hhcchhhHHHHHHhhcccCCCceEeec-ccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeee
Confidence 456778889999999999999987754 3345555789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
++++.|..+++++|.++..++...+........-...+....+ +.....+.....-..+ ....-.
T Consensus 113 ~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l-~i~~~~~~~~~~~~sv--------------~~~~~~ 177 (1032)
T KOG1178|consen 113 AVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRL-NIIDILLNSLFPKLSV--------------ETIADS 177 (1032)
T ss_pred ehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhh-hhHHHHhhccccccch--------------hhccch
Confidence 9999999999999999911111111111000000000000000 0000000000000000 000001
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh-HHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHIY 279 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl-~~~~ 279 (508)
+..+ ..............+..+++.||||+||.||+|.-+|..+.....+....+ .++..+++-..... ++..
T Consensus 178 f~~~-~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-----~~t~s~~~~~~~~~~~~d~ 251 (1032)
T KOG1178|consen 178 FQMV-LHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-----PPTGSDRFTFKTSVYFDDT 251 (1032)
T ss_pred hhhh-hccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-----CcCccchhhhhheeecccc
Confidence 1111 111111122234567789999999999999999999999999988876665 55666654222222 2333
Q ss_pred HHHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhh
Q 010535 280 DQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (508)
-.....+.+..|..+..+.. ++..+.+.+++|+++..+.+|++.++++.....-. ...
T Consensus 252 i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~--------~~l---------- 313 (1032)
T KOG1178|consen 252 IQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSL--------PLL---------- 313 (1032)
T ss_pred hHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcch--------hhh----------
Confidence 33345566777776766543 58999999999999999999999888865322110 000
Q ss_pred hccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceee
Q 010535 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFT 426 (508)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~ 426 (508)
......+++.... +.|+....+|++..-.+...+...+ -.-...-|+.++..+....
T Consensus 314 -------------~~~~~~~dl~~~~-~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~ 371 (1032)
T KOG1178|consen 314 -------------EHAFSLSDLLTKR-SCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSY 371 (1032)
T ss_pred -------------hhhhhcccccccc-hhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeH
Confidence 0000000000000 2689999999999998888665544 2222333888888776654
No 128
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.68 E-value=1.6e-15 Score=155.31 Aligned_cols=405 Identities=15% Similarity=0.123 Sum_probs=269.7
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCc--HhHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGS-AMRSRGVNPGDRCGIYGSNC--PEWII 117 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~-~L~~~gv~~gd~Vai~~~n~--~~~~~ 117 (508)
....+...++.+-.+++..+|.+.. |.++. ...+||..+..++.++|+ .|-+-|++++|+|.+++..+ .++++
T Consensus 92 a~~d~~avl~~~~nhs~~~ta~i~i---d~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~i 167 (1363)
T KOG3628|consen 92 ALTDIIAVLRYRRNHSATSTAHICI---DKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLI 167 (1363)
T ss_pred hhcchHHHHHhhccCCCCCceEEEE---cCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhh
Confidence 4566777778777889999999998 77777 789999999999999999 66667999999999999887 89999
Q ss_pred HHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
..++|..+|.+++|+.+..+.+++..+++....+++++............... .. . ....
T Consensus 168 sl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~-------------s~-~------k~v~ 227 (1363)
T KOG3628|consen 168 SLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPV-------------SL-A------KAVA 227 (1363)
T ss_pred hhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcc-------------cH-H------HHHH
Confidence 99999999999999999999999999999999999998876555432222100 00 0 0000
Q ss_pred eeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhh---------------ccc
Q 010535 198 CFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV---------------TGK 261 (508)
Q Consensus 198 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~---------------~~~ 261 (508)
++...++-... ............ ..+|-||++++|.--|++++|. ++.+...+...... ...
T Consensus 228 ~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~ 305 (1363)
T KOG3628|consen 228 WWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVF 305 (1363)
T ss_pred hhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcc
Confidence 00011110000 001111111222 8899999999999999999998 66665554332211 112
Q ss_pred cCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhc
Q 010535 262 VCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISS 336 (508)
Q Consensus 262 ~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 336 (508)
.....+.++.........|++. .+.+++.|.+.+.++. .+..+...+.+++.+++..--..+++....++.
T Consensus 306 ~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~---- 381 (1363)
T KOG3628|consen 306 PVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQE---- 381 (1363)
T ss_pred ccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccC----
Confidence 3455666777777777778775 7789999999988864 788999999999999998877766665432221
Q ss_pred CChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc---------
Q 010535 337 GGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--------- 407 (508)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~--------- 407 (508)
.....+++.+-+..-.+++|.+.+....++.+..+.....+
T Consensus 382 ------------------------------~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~ 431 (1363)
T KOG3628|consen 382 ------------------------------DPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNV 431 (1363)
T ss_pred ------------------------------CcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCc
Confidence 00111111111111124899999999998887766554432
Q ss_pred -------------CCceeeeccccCCCcceeeccCCC-c----------------------------ccccccccccCC-
Q 010535 408 -------------GAPLTQGYGLTESCSGCFTSLADV-F----------------------------NMIGTVGVPMTT- 444 (508)
Q Consensus 408 -------------~~~l~~~YG~TE~~~~~~~~~~~~-~----------------------------~~~~s~G~p~~~- 444 (508)
|.-....-+++|.+......+... . .....+|...||
T Consensus 432 ~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~ 511 (1363)
T KOG3628|consen 432 KVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGD 511 (1363)
T ss_pred ceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccc
Confidence 222222333344443332211100 0 001135555555
Q ss_pred eEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-------------CCccccCcEEEEcCCC
Q 010535 445 VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------------DGWFHTGDIGEWQPME 507 (508)
Q Consensus 445 ~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-------------~gw~~TGDlg~~d~~G 507 (508)
+.+.|++ +| ...-+..+++|||||.++++..+|+.-+..|...|. ..|.|||-+|++.+++
T Consensus 512 ~t~~vv~-~~-t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gk 585 (1363)
T KOG3628|consen 512 ATLAVVN-PD-TNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGK 585 (1363)
T ss_pred eEEEEeC-CC-cccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCe
Confidence 5556666 43 335556779999999999999999987777766661 1389999999998765
No 129
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.68 E-value=3.4e-15 Score=143.49 Aligned_cols=228 Identities=19% Similarity=0.162 Sum_probs=160.7
Q ss_pred CCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChH-HHHHHHHHHHHHhcCcE
Q 010535 215 PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA-HIYDQIIETHCIHKGCS 293 (508)
Q Consensus 215 ~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~-~~~g~~~~~~~l~~G~~ 293 (508)
.....+++..|--||||||+|+-+.+++..+......+.+.+.. .+...+|++..+.-.. +..|+..-+++--.|++
T Consensus 85 ~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~--~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~ 162 (438)
T COG1541 85 FAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYS--AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGAT 162 (438)
T ss_pred ccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHH--ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEE
Confidence 34455667778889999999999999999999888888887744 3677888776554321 12222333444445666
Q ss_pred EEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHH
Q 010535 294 IGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSL 372 (508)
Q Consensus 294 ~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (508)
++-... +.+.-++.++.+++|++.++|+.+..|++.+.... .+..
T Consensus 163 vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G----------------------------------~~~~ 208 (438)
T COG1541 163 VIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEG----------------------------------IDPD 208 (438)
T ss_pred EEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcC----------------------------------CChh
Confidence 554443 89999999999999999999999999988665442 0111
Q ss_pred HHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeec
Q 010535 373 VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV 452 (508)
Q Consensus 373 ~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~ 452 (508)
+ .+||.+++|+|++++++.+.+.+.||+..++.||+||..+......... .-.-..-+..-+.|+|
T Consensus 209 ~---------~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~~----~glhi~eD~~~~Ei~d- 274 (438)
T COG1541 209 K---------LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTER----NGLHIWEDHFIFEIVD- 274 (438)
T ss_pred h---------cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCcccccccc----cCCCcchhhceeeeec-
Confidence 1 2899999999999999999999999999999999999977641111110 1011233567788999
Q ss_pred CCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcC
Q 010535 453 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQP 505 (508)
Q Consensus 453 ~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~ 505 (508)
|+.+ .+.+.|+.|||+++.= +.+.+.==-|+|||++.+.+
T Consensus 275 P~t~-e~l~dge~GelV~T~L------------~~~~~PlIRYrtgDit~i~~ 314 (438)
T COG1541 275 PETG-EQLPDGERGELVITTL------------TKEGMPLIRYRTGDITVILS 314 (438)
T ss_pred CCcC-ccCCCCCeeEEEEEec------------cccCcceEEEEcCCeeEecc
Confidence 5544 3334558899999862 11111111489999999876
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.32 E-value=1.2e-10 Score=115.26 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=100.3
Q ss_pred EEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEec-ChHHHHHHHHHHHHHhcC-cEEEEec--
Q 010535 223 STIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFL-PLAHIYDQIIETHCIHKG-CSIGFWR-- 298 (508)
Q Consensus 223 ~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-pl~~~~g~~~~~~~l~~G-~~~v~~~-- 298 (508)
..+..||||||.|-.+..+................+ .++..++++...+ --.+.+.. +... ..+....
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~--~g~~~g~r~a~~~~~~~~ly~~------~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLP--DGLFAKHRIAFFLRADNNLYQS------VNNRWISLDFFDLL 173 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCc--cccccCCcEEEEEccChhHHHH------HHhccceeeecCCC
Confidence 456779999999999999988765544433222212 2444545544432 11122211 1111 1122222
Q ss_pred CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHH
Q 010535 299 GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIR 378 (508)
Q Consensus 299 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 378 (508)
.+.+..++.|++++|+.+.+.|+.+..|++.++.... +
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l----------------------------------~-------- 211 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL----------------------------------T-------- 211 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC----------------------------------C--------
Confidence 2788999999999999999999999999875433210 0
Q ss_pred HHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcce
Q 010535 379 EAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC 424 (508)
Q Consensus 379 ~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~ 424 (508)
..++.++++||+++++..+.+++.||++|++.||+|| |.++
T Consensus 212 ----~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 212 ----IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLA 252 (430)
T ss_pred ----CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheE
Confidence 1689999999999999999999999999999999999 5443
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.68 E-value=3.9e-06 Score=81.45 Aligned_cols=223 Identities=15% Similarity=0.170 Sum_probs=128.6
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHH---HHH--HHHHHHHHhcCc
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH---IYD--QIIETHCIHKGC 292 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~---~~g--~~~~~~~l~~G~ 292 (508)
..+++..++-||||||.|--+.+.+..+..+..++...+..........-.++...|-.. ..+ .......+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 345677889999999998667777767776666655554321111122233444334321 111 111222344555
Q ss_pred EEEEecC--CHhhHHHHh----hhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcc
Q 010535 293 SIGFWRG--DVRYLMEDI----QELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAA 366 (508)
Q Consensus 293 ~~v~~~~--~~~~~~~~i----~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (508)
...+-.. +.+.++..+ .+.++..+++.|.++-.++..+.+....
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~------------------------------ 216 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIR------------------------------ 216 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCc------------------------------
Confidence 5333222 556555555 3567899999999888776654433211
Q ss_pred hhhhHHHHHHHHHHhCCcEEEEEeec------CCCC-HHHHHHHHHhcCC----ceeeeccccCCCcceeeccCCCcccc
Q 010535 367 PLLDSLVFSKIREAFGGRLQAMLSGA------APLP-IHVEEFLRVTSGA----PLTQGYGLTESCSGCFTSLADVFNMI 435 (508)
Q Consensus 367 ~~~~~~~l~~~~~~~~~~l~~i~~gG------~~l~-~~~~~~~~~~~~~----~l~~~YG~TE~~~~~~~~~~~~~~~~ 435 (508)
+.++ +..+.+-.|| +.++ .++.+.+++.+|+ .+++.||+||............
T Consensus 217 -----~~L~-------~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~---- 280 (365)
T PF04443_consen 217 -----FRLP-------KGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH---- 280 (365)
T ss_pred -----ccCC-------CCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc----
Confidence 0011 2456666776 3464 5777888888887 7999999999776544332211
Q ss_pred cccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCC
Q 010535 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM 506 (508)
Q Consensus 436 ~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~ 506 (508)
. +.|.- +.|.| +++ ..++..|+.|-|.+-.+... .|. +..-|.|+|.+..+
T Consensus 281 --~--~~p~w-V~iRD-p~t-l~~~~~Ge~Gli~vidl~~~-s~p------------~~IlTeDlGvl~~~ 331 (365)
T PF04443_consen 281 --F--HVPPW-VIIRD-PET-LEPLPPGETGLIQVIDLANT-SYP------------GFILTEDLGVLHGD 331 (365)
T ss_pred --c--cCCCe-EEEEC-CCC-CcCCCCCCeeEEEEEccccc-CCC------------cEEEEcceeeecCC
Confidence 1 22222 66778 544 35566679999998876432 221 23568888877654
No 132
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=96.24 E-value=0.027 Score=58.20 Aligned_cols=32 Identities=25% Similarity=0.148 Sum_probs=25.5
Q ss_pred CCCCCCeEEEEecCCCCCC-cceeeechHHHHH
Q 010535 216 PKKKTNISTIMYTSGTTGE-PKGVVLTNQAIVA 247 (508)
Q Consensus 216 ~~~~~~~~~i~~TSGTTG~-pK~v~~sh~~~~~ 247 (508)
...++.+.+...||||||. ||-|.+|...+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 4455668899999999999 9999999887655
No 133
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=95.15 E-value=2.1 Score=44.60 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=25.8
Q ss_pred CCCeEEEEecCCCCC-CcceeeechHHHHHHHH
Q 010535 219 KTNISTIMYTSGTTG-EPKGVVLTNQAIVAEVL 250 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG-~pK~v~~sh~~~~~~~~ 250 (508)
+..+.++.-|||||| .+|-|.+|...+-....
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~ 120 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELDRKTF 120 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHHHHHH
Confidence 566788999999995 89999999887655433
No 134
>PRK09188 serine/threonine protein kinase; Provisional
Probab=95.06 E-value=0.011 Score=57.61 Aligned_cols=19 Identities=21% Similarity=0.083 Sum_probs=16.9
Q ss_pred ccCCccccCcEEEE-cCCCC
Q 010535 490 IVDGWFHTGDIGEW-QPMEL 508 (508)
Q Consensus 490 ~~~gw~~TGDlg~~-d~~G~ 508 (508)
+.+|||+|||+|++ |+||+
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~ 225 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGL 225 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCe
Confidence 47899999999998 79986
No 135
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.50 E-value=0.29 Score=48.41 Aligned_cols=109 Identities=12% Similarity=-0.029 Sum_probs=83.1
Q ss_pred CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh--HHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCce
Q 010535 74 PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVS 151 (508)
Q Consensus 74 ~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 151 (508)
..-.+|+.|+...+..+|+.|...|..+||+|.....-+.. -.-..+|+.++|+.++|+.+ -.-+....++++.++.
T Consensus 106 t~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~t 184 (438)
T COG1541 106 TVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPT 184 (438)
T ss_pred eeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCc
Confidence 44578999999999999999999999999999888773322 16788999999999999988 3466677789999999
Q ss_pred EEEEcCCChhhHhhcCccC-----CCCccEEEEecCC
Q 010535 152 IAFVQENKIPSILSCLPRC-----CLYLKTIVSFANV 183 (508)
Q Consensus 152 ~vi~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~ 183 (508)
++.+.......+.+...+. ...++.++.....
T Consensus 185 vI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~ 221 (438)
T COG1541 185 VIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEP 221 (438)
T ss_pred EEEEChHHHHHHHHHHHHcCCChhhcceeEEEEeccc
Confidence 9999988766555544332 2344555554333
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=94.24 E-value=4.1 Score=42.46 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=25.0
Q ss_pred CCCCeEEEEecCCCCC-CcceeeechHHHHH
Q 010535 218 KKTNISTIMYTSGTTG-EPKGVVLTNQAIVA 247 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG-~pK~v~~sh~~~~~ 247 (508)
.+..+.++.-|||||| .+|-|.+++..+..
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 3566778899999997 59999999987665
No 137
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=94.17 E-value=0.86 Score=47.62 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=25.2
Q ss_pred CCCCCeEEEEecCCCC-CCcceeeechHHHH
Q 010535 217 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIV 246 (508)
Q Consensus 217 ~~~~~~~~i~~TSGTT-G~pK~v~~sh~~~~ 246 (508)
..++.+.+..-||||| |.+|-|.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 3456778899999999 89999999997665
No 138
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=83.19 E-value=9.2 Score=38.85 Aligned_cols=83 Identities=18% Similarity=0.138 Sum_probs=63.6
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh--HHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (508)
..+|.+++...+...+..+...|+.+||++.+..+.... ....++++..+|+.+++... ......+++..++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 468999999988888888888999999999998876543 23456788899998876653 2345677888999988
Q ss_pred EEcCCChh
Q 010535 154 FVQENKIP 161 (508)
Q Consensus 154 i~~~~~~~ 161 (508)
+.......
T Consensus 181 ~~~ps~ll 188 (445)
T TIGR03335 181 VASVFKLL 188 (445)
T ss_pred EECHHHHH
Confidence 87655433
No 139
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=82.94 E-value=7.6 Score=39.10 Aligned_cols=88 Identities=16% Similarity=0.095 Sum_probs=66.8
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH--hHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEE
Q 010535 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 77 ~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 154 (508)
.+|..++......++..+...|+++||++........ ......+++..+|+.++++++.. .+.+...++..++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4677787777777777888889999999887665442 22334677889999999887754 57788899999999999
Q ss_pred EcCCChhhHhh
Q 010535 155 VQENKIPSILS 165 (508)
Q Consensus 155 ~~~~~~~~~~~ 165 (508)
........+.+
T Consensus 173 ~~Ps~l~~L~~ 183 (422)
T TIGR02155 173 VTPSYMLNLLE 183 (422)
T ss_pred EcHHHHHHHHH
Confidence 98876655543
No 140
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.08 E-value=29 Score=35.74 Aligned_cols=105 Identities=17% Similarity=0.156 Sum_probs=73.0
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH--hHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~--~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++ ....+|+..+...+..+.. ..+++.+|++...++..- .+...+++++..|+.+++
T Consensus 164 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 164 DPDDVADILFT--SGTTGRPKGAMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCceEEEEeC--CCCCCCCCEEEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 44566665441 23233 2246899988766655443 347889999988877643 334567889999998876
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhc
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSC 166 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 166 (508)
. +..+++.+...++..++.+++........+...
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 272 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPTMYNSLLQH 272 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC
Confidence 5 567889999999999999998887766655443
No 141
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.29 E-value=53 Score=33.74 Aligned_cols=120 Identities=10% Similarity=-0.048 Sum_probs=78.6
Q ss_pred CCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEecc
Q 010535 57 PNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLY 133 (508)
Q Consensus 57 p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l~ 133 (508)
++.++++..+ .+.++ ....+|++.+...+..... ..+++++|++....+..-.+ ....++++..|+.++..+
T Consensus 166 ~~~~~~i~~T--SGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 240 (521)
T PRK06187 166 ENDAAAMLYT--SGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPR 240 (521)
T ss_pred ccceEEEEEC--CCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecC
Confidence 3556665441 23223 2246789888876666555 45789999998887765322 344455888999988777
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc---CCCCccEEEEecC
Q 010535 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR---CCLYLKTIVSFAN 182 (508)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~i~~~~ 182 (508)
.. +.+.+...++..++.++++.......+...... ....++.++....
T Consensus 241 ~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge 291 (521)
T PRK06187 241 RF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGA 291 (521)
T ss_pred CC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCc
Confidence 65 889999999999999999987766655443322 2234555444433
No 142
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=73.38 E-value=65 Score=31.82 Aligned_cols=122 Identities=15% Similarity=0.131 Sum_probs=83.4
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l 132 (508)
.++.++++..+ .+.++ ....+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..
T Consensus 118 ~~~~~~~i~~T--SGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~ 192 (408)
T TIGR01733 118 GPDDLAYVIYT--SGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVP 192 (408)
T ss_pred CCCCcEEEEEc--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEc
Confidence 45667776542 22222 2356788888877776665 3467788998888776543 455678888889888877
Q ss_pred cCCCC--HHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecC
Q 010535 133 YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFAN 182 (508)
Q Consensus 133 ~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 182 (508)
+.... .+.+..+++..++..+++.......+..........++.++....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~ 244 (408)
T TIGR01733 193 PEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGE 244 (408)
T ss_pred ChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCc
Confidence 66555 788999999999999999888777665544333455666655443
No 143
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=70.78 E-value=43 Score=33.29 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=69.3
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++. -....+|+..+...+..++..+.. .++..++++....+-.. ..+...++++..|+..+..
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~--~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRK--LGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHH--TTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHH--hCCCccccccccCCccc-eeeeeeccccccccccccc
Confidence 356777665 234578999999999998887743 36788888887777653 3345678889999999888
Q ss_pred cC--CHhhHHHHhhhhcCeEEEe
Q 010535 298 RG--DVRYLMEDIQELKPTMFSG 318 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~ 318 (508)
.. ..+.+...+++.++++++.
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccceeEEEE
Confidence 64 7889999999999999996
No 144
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=69.83 E-value=48 Score=33.18 Aligned_cols=116 Identities=13% Similarity=0.002 Sum_probs=76.5
Q ss_pred CCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH-hHHHHHHHHHhcCCEEEecc
Q 010535 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLY 133 (508)
Q Consensus 57 p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~-~~~~~~lA~~~~G~~~v~l~ 133 (508)
+++++++..+ .+.++. ...+|++.+...+..++.. .+++++|++....+-.. ..+..+++++..|+.++..+
T Consensus 110 ~~~~~~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMFT--SGTTGKPKAVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 4556665441 333332 3478999988777766654 37899999888777542 22345678889999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEec
Q 010535 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (508)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~ 181 (508)
+. +.+...++..++.++.........+.+..... ..++.++...
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-~~l~~~~~~G 228 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-ENLRKILLGG 228 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC-CceEEEEECC
Confidence 53 48888999999999998877666555433222 3455555533
No 145
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=67.97 E-value=40 Score=30.56 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=43.4
Q ss_pred HhCCCCCCCEEEEEcCCcH--hHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCc
Q 010535 95 RSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEV 150 (508)
Q Consensus 95 ~~~gv~~gd~Vai~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 150 (508)
...|+.++|++. .+|-.- .....+++++..|++.+.+ ++.+++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 877653 3345789999999998887 68999999888887764
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=67.87 E-value=70 Score=33.38 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=70.1
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++. ...+|++.+...+..+... .+++++|++....+-. ..++..+++.+..|+.++.
T Consensus 197 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~ 271 (559)
T PRK08315 197 DPDDPINIQYT--SGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVY 271 (559)
T ss_pred CCCCcEEEEEc--CCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEE
Confidence 35566665441 333332 2467888886655554433 4789999998877763 4445667888899988886
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPS 162 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 162 (508)
.....++..+...+++.++..++........
T Consensus 272 ~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 302 (559)
T PRK08315 272 PGEGFDPLATLAAVEEERCTALYGVPTMFIA 302 (559)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEecchHHHHH
Confidence 6667788899999999999998876654433
No 147
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=67.29 E-value=78 Score=32.97 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=75.1
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
+..+|++.+...+..++..+.....+...+|++...+|...-+. ...++++..|+.+.-... +..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 77999999999999998888544345788999999998775333 356778888888876653 899999999999999
Q ss_pred EEEecchHHHHHHHH
Q 010535 315 MFSGVPRVYDRIYTG 329 (508)
Q Consensus 315 ~~~~~P~~~~~l~~~ 329 (508)
+++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999999998887554
No 148
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=65.08 E-value=1.2e+02 Score=31.55 Aligned_cols=122 Identities=14% Similarity=-0.012 Sum_probs=78.2
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (508)
.|+.+|++..+ .|.++ ....+|++.+...+.... ...++..+|++...+|-. ..+...++..+..|+.++.
T Consensus 181 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILFT--SGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 46777776652 23222 234789888876544433 345678899888877743 2223345677788888776
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc---cCCCCccEEEEecC
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFAN 182 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~i~~~~ 182 (508)
......++.+...++..++..+.........+..... .....++.++.-+.
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~ 309 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGD 309 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCc
Confidence 6555788999999999999999988776665543221 12345555555443
No 149
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=64.15 E-value=27 Score=25.16 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=52.3
Q ss_pred EeeHHHHHHHHHHHHH---HHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceE
Q 010535 77 WLTYQEVYDAAIRFGS---AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (508)
Q Consensus 77 ~~Ty~~l~~~v~~~A~---~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (508)
..||+||.+.-..++. .|.+..++..|-|+|+-=++..++ -++.|+.-.+.++++..++..++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchh
Confidence 4899999888877764 466678899999999987775543 5677888899999999999888764
No 150
>PRK12583 acyl-CoA synthetase; Provisional
Probab=62.94 E-value=1e+02 Score=32.10 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=68.7
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--cHhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++ ....+|++.+...+..+... .+++.+|++....|- ....+..+++++..|+.++.
T Consensus 199 ~~~~~a~i~~T--SGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 199 DRDDPINIQYT--SGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred CCCCcEEEEEC--CCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 35555654431 23333 22468898887666555443 378899998877764 34556667888889988875
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 161 (508)
.........+...+++.++..++.......
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 303 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTMFI 303 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHHHH
Confidence 555677888889999999999887665443
No 151
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=62.00 E-value=1.4e+02 Score=31.39 Aligned_cols=105 Identities=10% Similarity=-0.060 Sum_probs=71.1
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh--HHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~--~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .|.++. ...+|.+.+...+.. .....+++++|++....+.... ....+++.+..|+..+.
T Consensus 203 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~ 277 (570)
T PRK04319 203 DREDGAILHYT--SGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVI 277 (570)
T ss_pred CCCCCEEEEeC--CCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEE
Confidence 34566766541 233332 236788777554433 3334578889987766655432 24567788899998887
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
......++.+...++..++.+++........+..
T Consensus 278 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 278 DGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred ECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 7777889999999999999999988776666544
No 152
>PLN02565 cysteine synthase
Probab=60.51 E-value=84 Score=30.31 Aligned_cols=69 Identities=9% Similarity=0.053 Sum_probs=53.5
Q ss_pred HHHHHHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 90 FGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 90 ~A~~L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+-..+.+.| +.+|....+.....-..+.+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 53 ~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 53 MITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 333444556 478866556666666777778889999999998888888888889999999999998864
No 153
>PLN03051 acyl-activating enzyme; Provisional
Probab=59.41 E-value=1e+02 Score=31.71 Aligned_cols=104 Identities=10% Similarity=-0.115 Sum_probs=67.5
Q ss_pred CCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEecc
Q 010535 57 PNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLY 133 (508)
Q Consensus 57 p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l~ 133 (508)
|+.++++..+ .+.++ ....+|.+.+...+... ....++..+|++....|-.-. ....+++++..|+.++...
T Consensus 118 ~~d~a~i~yT--SGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILFS--SGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEeC--CCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 4566666542 22222 22366777665443322 234578889988766664321 1335677889999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
.....+.+...+++.++.++.........+.+
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 55567889999999999999988776665543
No 154
>PLN03052 acetate--CoA ligase; Provisional
Probab=58.31 E-value=1.1e+02 Score=33.31 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=73.9
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++.-..+..|.+ ...+|...+...+..++..+.. .+..++|++...+|..- -.++.+++++..|+..+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDA--LGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEee
Confidence 356677654332221222 3568999999999998887743 37889999999988653 3344677888899988876
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
.. .++.+...+++.++.++++....
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 53 89999999999999999987654
No 155
>PRK09274 peptide synthase; Provisional
Probab=57.44 E-value=1e+02 Score=32.19 Aligned_cols=99 Identities=10% Similarity=0.045 Sum_probs=70.0
Q ss_pred CCCeEEEEecCCC-CCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 219 KTNISTIMYTSGT-TGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 219 ~~~~~~i~~TSGT-TG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
++.++++....++ ....+...+|...+...+..++..+.. .++..+|++...++-.. --+...++++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~--~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA--AGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEc
Confidence 3555654432222 122334468999999999888887744 36788999988887553 2333577888999988877
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecc
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVP 320 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P 320 (508)
.. ..+.+...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 64 788899999999999998765
No 156
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=56.83 E-value=2.2e+02 Score=29.22 Aligned_cols=86 Identities=13% Similarity=-0.018 Sum_probs=65.0
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 154 (508)
..+|...+...+..+...+ +++.+|++...+|-+-. .+..+++++..|+.++.. +...++.+...++..++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4678888877766665433 57889999888886543 244567888899998865 456788999999999999999
Q ss_pred EcCCChhhHhh
Q 010535 155 VQENKIPSILS 165 (508)
Q Consensus 155 ~~~~~~~~~~~ 165 (508)
........+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 88876665544
No 157
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=56.64 E-value=56 Score=32.94 Aligned_cols=86 Identities=15% Similarity=0.118 Sum_probs=64.7
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
++..|.+.+...+.+++.-+.. .++.++|++..+.|.+.-.- .+.+++...|..++-..+ ...++.-.+++.++.
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~--lGL~kGDrVgvwgpN~~~w~-l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k 151 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLS--LGLKKGDRVGVWGPNSYEWV-LCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCK 151 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHh--hcCCCCCEEEEecCChHHHH-HHHHHHHHhceEEeccCcccccHHHHHHHhhcCeE
Confidence 4567888898888887764433 48999999999988774322 256677788887776654 667788889999999
Q ss_pred EEEecchHHHH
Q 010535 315 MFSGVPRVYDR 325 (508)
Q Consensus 315 ~~~~~P~~~~~ 325 (508)
+++..|.+-..
T Consensus 152 ~l~~p~~~k~~ 162 (596)
T KOG1177|consen 152 ALFAPPQFKTQ 162 (596)
T ss_pred EEEccchhhhc
Confidence 99998876443
No 158
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=53.50 E-value=67 Score=31.61 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=47.9
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccC-----CCCHHHHHHHHHhcCceEEEEc
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~~ 156 (508)
..+.-.|+.+++++||-|.+ .+..++...=++...|+.+|.+|- +.+++.++..+... .++||.-
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 44555677778999995554 456788888999999999998854 35788888888775 5555543
No 159
>PLN03102 acyl-activating enzyme; Provisional
Probab=53.09 E-value=1.4e+02 Score=31.46 Aligned_cols=85 Identities=8% Similarity=-0.019 Sum_probs=65.7
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .++..+|++...+|-.- --....++++..|+.++.... +.+.+...++..+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~--~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLIS--LNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 58999999988888877643 36788999988888543 222356788888888877664 89999999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+.....+
T Consensus 116 i~~~~~~~~~ 125 (579)
T PLN03102 116 FVDRSFEPLA 125 (579)
T ss_pred EEChhhHHHH
Confidence 9877665443
No 160
>PRK11761 cysM cysteine synthase B; Provisional
Probab=52.20 E-value=1.3e+02 Score=28.63 Aligned_cols=67 Identities=10% Similarity=0.056 Sum_probs=49.7
Q ss_pred HHHHHHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 90 FGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 90 ~A~~L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
+...+.+.| +.+|+.|+. ...+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 50 ~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 50 MIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 333344555 567777544 4555566777788889999888887777777788889999999999986
No 161
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=51.54 E-value=1.4e+02 Score=31.76 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=72.9
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++.... .+| ....+|.+.+...+..++..+.. .+..++|++...+|... -.+..+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKS--LGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEecc
Confidence 456677654321 122 24578999999999888877643 37789999999988653 3344577888899888776
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
.. .++.+...++..++.+++.....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 53 88999999999999999987654
No 162
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=51.41 E-value=1.9e+02 Score=30.94 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=64.7
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|.+.+...+..++..+.. .++.++|++...+|..-- .+..+++++..|+..+.... .++.+...+++.++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ 167 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLN--LNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKL 167 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCE
Confidence 578999999999998887744 378899999999887642 23357788888888776653 8999999999999999
Q ss_pred EEecc
Q 010535 316 FSGVP 320 (508)
Q Consensus 316 ~~~~P 320 (508)
+++..
T Consensus 168 li~~~ 172 (647)
T PTZ00237 168 IITTN 172 (647)
T ss_pred EEEcc
Confidence 99865
No 163
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=51.37 E-value=1.5e+02 Score=30.76 Aligned_cols=97 Identities=12% Similarity=0.030 Sum_probs=70.7
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++..- ++.++...+|...+...+..++..+.. .++..++++...++...-+ ....++++..|+..+...
T Consensus 38 p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 38 PDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLAR--LGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccc
Confidence 4566655422 223344578999999988888877643 2678899998888765433 345778888998887665
Q ss_pred C--CHhhHHHHhhhhcCeEEEecch
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (508)
. ..+.+...++..++..++....
T Consensus 112 ~~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 112 PIFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cccCHHHHHHHHHhcCceEEEEecc
Confidence 4 7888999999999999987664
No 164
>PRK07788 acyl-CoA synthetase; Validated
Probab=50.86 E-value=1e+02 Score=32.07 Aligned_cols=85 Identities=9% Similarity=-0.097 Sum_probs=67.0
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|.+.+...+..++..+... ++..++++...++-.- --+...++++..|+.++.... ..+.+...+++.+++.+
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~--gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLAL--GVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 689999999988888777432 6778999888776542 333457788999999988875 78899999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+.....+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 9988766554
No 165
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=50.73 E-value=1.8e+02 Score=31.17 Aligned_cols=97 Identities=11% Similarity=0.109 Sum_probs=71.5
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++.... .| ....+|.+.+...+..++..+.. .+..++|++...+|... -.+..+++++..|+..+...
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRA--LGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEeeC
Confidence 46677554322 22 13568999999999888877643 36788999999988653 33446778899999887775
Q ss_pred C--CHhhHHHHhhhhcCeEEEecchH
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
. ....+...++..++.++++....
T Consensus 171 ~~~~~~~l~~~l~~~~~~~li~~~~~ 196 (655)
T PRK03584 171 PDFGVQGVLDRFGQIEPKVLIAVDGY 196 (655)
T ss_pred CCCCHHHHHHHHHHcCCcEEEEcccc
Confidence 4 78899999999999999887643
No 166
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=50.53 E-value=1.5e+02 Score=27.68 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=63.6
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcC
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G 126 (508)
..+++.-++.|+.-.+... |...-++-..|=.++.+++.++..+|.++++ .+.++.-|+...++.-.-=.+..
T Consensus 19 sVlrei~~~LP~e~~iY~~---D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~i----k~lVIACNTASa~al~~LR~~~~ 91 (269)
T COG0796 19 SVLREIRRQLPDEDIIYVG---DTARFPYGEKSEEEIRERTLEIVDFLLERGI----KALVIACNTASAVALEDLREKFD 91 (269)
T ss_pred HHHHHHHHHCCCCcEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHcCC----CEEEEecchHHHHHHHHHHHhCC
Confidence 3567777889999999888 8888888899999999999999999999876 47888888877666555555555
Q ss_pred CEEEeccCC
Q 010535 127 ITYVPLYDT 135 (508)
Q Consensus 127 ~~~v~l~~~ 135 (508)
..++-+-|.
T Consensus 92 iPVvGviPa 100 (269)
T COG0796 92 IPVVGVIPA 100 (269)
T ss_pred CCEEEeccc
Confidence 544443343
No 167
>PRK08316 acyl-CoA synthetase; Validated
Probab=50.46 E-value=1.7e+02 Score=29.96 Aligned_cols=88 Identities=11% Similarity=-0.062 Sum_probs=68.6
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|+..+...+..++..+... +...++++....+.... .+...++++..|+..+.... ....+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~--gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDL--GLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 5689999998888888776442 67788888887776543 34457788999988887764 7888999999999999
Q ss_pred EEecchHHHHHHH
Q 010535 316 FSGVPRVYDRIYT 328 (508)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (508)
++........+.+
T Consensus 112 ii~~~~~~~~~~~ 124 (523)
T PRK08316 112 FLVDPALAPTAEA 124 (523)
T ss_pred EEEccchHHHHHH
Confidence 9998887766543
No 168
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=50.41 E-value=49 Score=27.24 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=34.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---cHhHHHHHHHHHhcCCEEE
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSN---CPEWIIAMEACNSQAITYV 130 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n---~~~~~~~~lA~~~~G~~~v 130 (508)
..++..|.+.|+.+++.|++++.. .....-+++++..+|..-|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467888899999999999999875 5677777888888886533
No 169
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.82 E-value=2.3e+02 Score=28.73 Aligned_cols=120 Identities=13% Similarity=0.022 Sum_probs=75.4
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.++.++++..+ .+.++. ...+|++.+...+.... ...+++++|++...+|-.-.+ +..+++.+..|+.++..
T Consensus 139 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 213 (483)
T PRK03640 139 DLDEVATIMYT--SGTTGKPKGVIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLV 213 (483)
T ss_pred CCCCeEEEEeC--CCcCCCCcEEEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEec
Confidence 34556655431 233332 34678887765443332 235889999999988753222 33456777889888766
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc--cCCCCccEEEEec
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFA 181 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~i~~~ 181 (508)
+ ..+..++...++..++.++.........+..... .....++.++.-.
T Consensus 214 ~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g 263 (483)
T PRK03640 214 E-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGG 263 (483)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcC
Confidence 5 5778999999999999999998876665543322 1113455554443
No 170
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=49.41 E-value=1.8e+02 Score=30.50 Aligned_cols=104 Identities=15% Similarity=0.075 Sum_probs=69.9
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-HhHHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (508)
.++.++++..+ .|.++. ...+|.+.+...+.... ...++.++|++....|-. ...+...++.+..|+..+..
T Consensus 170 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~ 244 (563)
T PLN02860 170 APDDAVLICFT--SGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL 244 (563)
T ss_pred CCCCeEEEEec--CCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec
Confidence 46777766542 333332 24678877765544433 245788999888877753 22334567788888887765
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
+...+..+...++..++.++.........+..
T Consensus 245 -~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 245 -PKFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred -CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 46788899999999999999988876665543
No 171
>PLN02736 long-chain acyl-CoA synthetase
Probab=49.41 E-value=2.6e+02 Score=29.99 Aligned_cols=88 Identities=7% Similarity=-0.024 Sum_probs=67.8
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|.+.+...+..++..+.. .++.++|++...++-..-+ ++..++++..|+.++.+.. .++.+...+++.++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~--~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQ--HGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 457999999998888877643 3788999998887765432 2346778888988886653 8899999999999999
Q ss_pred EEecchHHHHHHH
Q 010535 316 FSGVPRVYDRIYT 328 (508)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (508)
++..+..+..+..
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9998877665543
No 172
>PLN02654 acetate-CoA ligase
Probab=48.41 E-value=2e+02 Score=31.02 Aligned_cols=83 Identities=17% Similarity=0.184 Sum_probs=65.8
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
...+|.+.+...+..++..+.. .+..++|++...+|..- -.+..+++++..|+..+.... .++.+...++..++.
T Consensus 118 ~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~ 194 (666)
T PLN02654 118 DASLTYSELLDRVCQLANYLKD--VGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPK 194 (666)
T ss_pred eEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCce
Confidence 3568999999999998887744 37889999999988653 223357788889988776653 889999999999999
Q ss_pred EEEecchH
Q 010535 315 MFSGVPRV 322 (508)
Q Consensus 315 ~~~~~P~~ 322 (508)
++++....
T Consensus 195 ~li~~~~~ 202 (666)
T PLN02654 195 VVITCNAV 202 (666)
T ss_pred EEEEcCcc
Confidence 99987654
No 173
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=48.34 E-value=2e+02 Score=30.61 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=72.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++.... . ......+|++.+...+..++..+.. .+...+|++...+|-.-- .+..+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKS--LGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEec
Confidence 356777664221 1 1134678999999999998887643 367889999988876532 233577888899988877
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
.. ..+.+...++..++.+++.....
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 54 88999999999999999986654
No 174
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=48.24 E-value=1.4e+02 Score=31.01 Aligned_cols=87 Identities=6% Similarity=-0.085 Sum_probs=68.5
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+.. .+..+++++....|...-+ +...++++..|+..+.... ..+.+...+++.+++.
T Consensus 45 ~~~Ty~el~~~v~~la~~L~~--~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 121 (542)
T PRK06155 45 TRWTYAEAARAAAAAAHALAA--AGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARL 121 (542)
T ss_pred ccccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceE
Confidence 368999999998888877643 3677889888887766443 4457788999999887764 8899999999999999
Q ss_pred EEecchHHHHHH
Q 010535 316 FSGVPRVYDRIY 327 (508)
Q Consensus 316 ~~~~P~~~~~l~ 327 (508)
++..+.....+.
T Consensus 122 l~~~~~~~~~~~ 133 (542)
T PRK06155 122 LVVEAALLAALE 133 (542)
T ss_pred EEEChhhHHHHH
Confidence 999887766553
No 175
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=48.05 E-value=70 Score=31.62 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=36.9
Q ss_pred HHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEEE
Q 010535 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 93 ~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 155 (508)
.+...++++||.|++-.+ .+.....++...|+.++.++.. .+.+.+...++. +.++|+.
T Consensus 62 ~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 344557889998887554 3444556667788887776543 345666666543 5566553
No 176
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=47.76 E-value=2.7e+02 Score=30.25 Aligned_cols=101 Identities=11% Similarity=0.005 Sum_probs=66.5
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.+|++..+ .|.++ ....+|.+.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+.++.
T Consensus 363 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILFT--SGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 45667766542 23333 2347888888776655543 34788999988887752 3444567788889998886
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 161 (508)
.+.......+...++..++..++.......
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 467 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLG 467 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHH
Confidence 654445566777788888888876654433
No 177
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=47.72 E-value=1.8e+02 Score=27.60 Aligned_cols=66 Identities=8% Similarity=0.093 Sum_probs=48.0
Q ss_pred HHHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010535 93 AMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (508)
Q Consensus 93 ~L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (508)
...+.| +.+|++| +....+-.-..+.+++...|..+..+-|...+......++..++++++++...
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 344555 4777776 45555556666777888899988877776665666888999999999998753
No 178
>PRK06188 acyl-CoA synthetase; Validated
Probab=47.23 E-value=3.1e+02 Score=28.22 Aligned_cols=86 Identities=13% Similarity=-0.009 Sum_probs=64.2
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 155 (508)
..+|+..+...+... ....+++.+|++....|-+-.+...+++.+..|+..+..+. ..++.+...++..++.+++.
T Consensus 186 v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQ---LAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHH---HhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEe
Confidence 467787777655433 34457888999988888776666667778888988877654 66888999999999999998
Q ss_pred cCCChhhHhh
Q 010535 156 QENKIPSILS 165 (508)
Q Consensus 156 ~~~~~~~~~~ 165 (508)
.......+.+
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 7766555444
No 179
>PRK06164 acyl-CoA synthetase; Validated
Probab=47.15 E-value=1.6e+02 Score=30.43 Aligned_cols=104 Identities=15% Similarity=0.100 Sum_probs=71.9
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-HhHHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (508)
.++.++++..+ .|.++ ....+|.+.+...+..++..+ ++.+++++...+|-+ .-.+..+++.+..|+.++..
T Consensus 179 ~~~~~~~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 253 (540)
T PRK06164 179 DPDAGALLFTT--SGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE 253 (540)
T ss_pred CCCceEEEEEC--CCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec
Confidence 35677777642 22222 234678888877666555544 678899998888764 22345677888888887765
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
+......+...++..++.+++........+..
T Consensus 254 -~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 254 -PVFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred -CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 45678889999999999999887766655544
No 180
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=46.52 E-value=2.4e+02 Score=30.32 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=70.9
Q ss_pred CCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC
Q 010535 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG 299 (508)
Q Consensus 220 ~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~ 299 (508)
+.++++.... +|. ...+|.+.+...+..++..+.. .++.++|++...+|... -.+..+++++..|+..+....
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GdrV~i~~~n~~-e~~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRA--LGVRPGDRVSGYLPNIP-QAVVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCeEEEecCC
Confidence 4556544322 222 3468999999999998887743 37889999999988763 333457788888988776654
Q ss_pred --CHhhHHHHhhhhcCeEEEecchH
Q 010535 300 --DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 300 --~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
.++.+...+++.++.++++....
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~~~ 196 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVDGY 196 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcccc
Confidence 88999999999999999886643
No 181
>PLN03013 cysteine synthase
Probab=45.79 E-value=1.8e+02 Score=29.31 Aligned_cols=66 Identities=8% Similarity=0.065 Sum_probs=51.9
Q ss_pred HHHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 93 AMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 93 ~L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.+.| +++|....+.....-.-+.+.++|...|..+..+-|...+.+....++..++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344455 578866666667777777888889999998888877777888888999999999999764
No 182
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=45.44 E-value=2.1e+02 Score=27.23 Aligned_cols=61 Identities=8% Similarity=0.120 Sum_probs=48.0
Q ss_pred hCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 96 ~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
+.| +++|+ ..|=....-.-+...+.|...|..++.+=|..-..+...+|+..++.+++++.
T Consensus 55 ~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 445 89999 44445555566777777888999888887777777888899999999999997
No 183
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=45.14 E-value=1.6e+02 Score=27.68 Aligned_cols=90 Identities=12% Similarity=0.142 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCC----CHHHHHHHHHhcCceEEEEcCCCh
Q 010535 85 DAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL----GANAVEFIINHAEVSIAFVQENKI 160 (508)
Q Consensus 85 ~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~vi~~~~~~ 160 (508)
.|+-.+|..|++.| -.|.+++......... .+...|..+..++-.. ..+++..+++..+++++|+|....
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46778999997754 4677777766555433 3357788777775432 345688888889999999998643
Q ss_pred h-hHhhcCccCCCCccEEEEecCC
Q 010535 161 P-SILSCLPRCCLYLKTIVSFANV 183 (508)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~i~~~~~ 183 (508)
. ......+ .....++++++.
T Consensus 92 ~~~~~~~~k---~~~~~l~~iDD~ 112 (279)
T TIGR03590 92 DADWEKLIK---EFGRKILVIDDL 112 (279)
T ss_pred CHHHHHHHH---HhCCeEEEEecC
Confidence 3 2222222 123355666654
No 184
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=45.10 E-value=2.1e+02 Score=30.17 Aligned_cols=86 Identities=6% Similarity=-0.014 Sum_probs=66.4
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
-.+|+..+...+..++..+.. .+...++++...++-..-+ +...++++..|+..+.... ..+.+...+++.++..
T Consensus 61 ~~~Ty~eL~~~~~~la~~L~~--~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 137 (600)
T PRK08279 61 QSISYAELNARANRYAHWAAA--RGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKH 137 (600)
T ss_pred CcccHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCE
Confidence 358999999988888776643 3677889998887766433 3467788889988877764 7888999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++........+
T Consensus 138 li~~~~~~~~~ 148 (600)
T PRK08279 138 LIVGEELVEAF 148 (600)
T ss_pred EEEChHHHHHH
Confidence 99887766554
No 185
>PRK05857 acyl-CoA synthetase; Validated
Probab=44.98 E-value=1.9e+02 Score=29.98 Aligned_cols=82 Identities=15% Similarity=0.073 Sum_probs=63.9
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+.. .+..+++++...++... -.+...++++..|+..+.... ..+.+...++..++..
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ 116 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRA--QSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAA 116 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCce
Confidence 468999999999988877643 36778899988876553 333457788899998887764 7888999999999999
Q ss_pred EEecchH
Q 010535 316 FSGVPRV 322 (508)
Q Consensus 316 ~~~~P~~ 322 (508)
++..+..
T Consensus 117 ii~~~~~ 123 (540)
T PRK05857 117 ALVAPGS 123 (540)
T ss_pred EEEeccc
Confidence 8887754
No 186
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.51 E-value=3.2e+02 Score=28.43 Aligned_cols=93 Identities=12% Similarity=0.013 Sum_probs=70.0
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++...-+. .+|++.+...+..++..+... ++.++|++...+|... -.+...++++..|+..+...
T Consensus 25 ~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~--~v~~gdrVail~~N~~-e~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 25 PDRPALIFLGRGG-------RLTYRELDRRANRLAAALQAL--GVKPGDRVAILLPNSP-EFLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred CCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeecC
Confidence 4555655443332 889999999999998877443 3778999888887653 22345778888999988887
Q ss_pred C--CHhhHHHHhhhhcCeEEEecch
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (508)
. .+..+...++..++..++....
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEccc
Confidence 5 6888888888889999998877
No 187
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=44.29 E-value=67 Score=31.54 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEEEc
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (508)
..+-..|..+|+++||.|++-.- .+....-|+..+|+.++.+|-. .+++.+...++.-. ++|+..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 34555667789999999888644 4566778888999998877554 56778888776443 555543
No 188
>PRK08308 acyl-CoA synthetase; Validated
Probab=43.53 E-value=3.4e+02 Score=26.90 Aligned_cols=105 Identities=10% Similarity=0.044 Sum_probs=71.5
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH--hHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~--~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++. ...+|++.+...+..+... .++..+|++...+|-.- .++..++..+..|+.++.
T Consensus 99 ~~~~~~~i~~T--SGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQYS--SGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEEC--CCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 45667766552 232332 2467999887766655543 45678888877776543 345567888899998876
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhc
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSC 166 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 166 (508)
.. ...+..+...++..++.+++........+...
T Consensus 174 ~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 207 (414)
T PRK08308 174 IT-NKNPKFALNILRNTPQHILYAVPLMLHILGRL 207 (414)
T ss_pred cC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhc
Confidence 65 45678888889999999988887666655443
No 189
>PLN02246 4-coumarate--CoA ligase
Probab=43.41 E-value=1.5e+02 Score=30.66 Aligned_cols=86 Identities=9% Similarity=-0.038 Sum_probs=65.4
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|+..+...+..++..+.. .+...++++...++-.. -.+..+++++..|...+.... ....+...++..++..
T Consensus 49 ~~~ty~el~~~~~~la~~L~~--~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHK--LGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKL 125 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcE
Confidence 368999999888888776643 36788999888876552 233356778888888887764 7889999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++........+
T Consensus 126 li~~~~~~~~~ 136 (537)
T PLN02246 126 IITQSCYVDKL 136 (537)
T ss_pred EEEccchHHHH
Confidence 98877665544
No 190
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=43.17 E-value=99 Score=30.50 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=36.7
Q ss_pred HhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEEE
Q 010535 95 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 95 ~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 155 (508)
...++++||.|++-.+..+ ....++...|+.++.++.. .+.+++...++. +.++++.
T Consensus 64 ~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 3456789998887665444 4455667788887776532 456777776654 5666554
No 191
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=43.01 E-value=2.1e+02 Score=28.15 Aligned_cols=62 Identities=6% Similarity=0.028 Sum_probs=49.5
Q ss_pred hCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 96 ~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
+.| +++|....+....+-.-+.+.++|...|..+..+-|.....+....++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67886555556677777888888999999888887877777778999999999999974
No 192
>PRK00865 glutamate racemase; Provisional
Probab=42.72 E-value=1.9e+02 Score=26.79 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=50.5
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~ 115 (508)
.++++..+..|+...+.+. |....++-..|-.++.+++.+.+.+|.+.|+ ..+++.-|+...
T Consensus 19 tvl~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~----d~iVIaCNTa~~ 80 (261)
T PRK00865 19 TVLREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGV----KMLVIACNTASA 80 (261)
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC----CEEEEeCchHHH
Confidence 3466666789999999888 8888888899999999999999999998765 456666666553
No 193
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=42.50 E-value=2.1e+02 Score=26.43 Aligned_cols=62 Identities=11% Similarity=0.143 Sum_probs=51.4
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCcHhH
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~-~~gv~~gd~Vai~~~n~~~~ 115 (508)
.++++..+..|+...+.+. |...-+|-..|-.++.+.+.+.+.+|. +.|+ ..+++.-|+..+
T Consensus 12 tv~~~l~~~~p~~~~iy~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~----d~ivIaCNTA~a 74 (251)
T TIGR00067 12 SVLKEIRKQLPKEHYIYVG---DTKRFPYGEKSPEFILEYVLELLTFLKERHNI----KLLVVACNTASA 74 (251)
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCC----CEEEEeCchHHH
Confidence 3566777789999999888 888888889999999999999999999 8776 466777777763
No 194
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=42.15 E-value=2.8e+02 Score=33.04 Aligned_cols=122 Identities=7% Similarity=-0.100 Sum_probs=77.3
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l 132 (508)
.|+.+|++..+ .|-+| ....+|.+.+...+..++. ..++.++|++....+-+.+ .+..++.++..|+.++..
T Consensus 413 ~~~d~a~ii~T--SGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~ 487 (1389)
T TIGR03443 413 GPDSNPTLSFT--SGSEGIPKGVLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVP 487 (1389)
T ss_pred CCCCceEEEEC--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEc
Confidence 46777776542 23222 2246788877666544433 3478889998877665432 344577888899987765
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecC
Q 010535 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFAN 182 (508)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 182 (508)
+.. ..+..+...++..++.++.........+..........++.++..+.
T Consensus 488 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe 539 (1389)
T TIGR03443 488 TADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATTPIPSLHHAFFVGD 539 (1389)
T ss_pred ChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccccCCCccEEEEecc
Confidence 543 25678899999999999988776655554333333456666655544
No 195
>PRK13388 acyl-CoA synthetase; Provisional
Probab=41.97 E-value=2.5e+02 Score=29.13 Aligned_cols=86 Identities=9% Similarity=-0.076 Sum_probs=64.8
Q ss_pred eeechHHHHHHHHhhhhhhhhccccC-CCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
..+|+..+...+..++..+... +. .+++++...++...- -++..++++..|+..+.... ..+.+...+++.+++
T Consensus 25 ~~lTy~el~~~~~~la~~L~~~--g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~ 101 (540)
T PRK13388 25 RTWTWREVLAEAAARAAALIAL--ADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQ 101 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCC
Confidence 3789999999998888776432 45 578888887775533 23357788889998887764 788999999999999
Q ss_pred EEEecchHHHHH
Q 010535 315 MFSGVPRVYDRI 326 (508)
Q Consensus 315 ~~~~~P~~~~~l 326 (508)
.++........+
T Consensus 102 ~~i~~~~~~~~~ 113 (540)
T PRK13388 102 LLVTDAEHRPLL 113 (540)
T ss_pred EEEEChhhhHHH
Confidence 999877665443
No 196
>PRK13383 acyl-CoA synthetase; Provisional
Probab=41.84 E-value=1.7e+02 Score=30.22 Aligned_cols=85 Identities=7% Similarity=-0.091 Sum_probs=65.5
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..+...+.. .+..+++++...++..- ..+...++++..|+..+.... ..+.+...+++.++..+
T Consensus 60 ~lTy~el~~~~~~la~~L~~--~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLTR--DGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 57888898888888877643 26778899888776443 233356778888999887764 88999999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+...+.+
T Consensus 137 i~~~~~~~~~ 146 (516)
T PRK13383 137 VADNEFAERI 146 (516)
T ss_pred EEchhHHHHH
Confidence 9988766554
No 197
>PLN00011 cysteine synthase
Probab=41.64 E-value=2.5e+02 Score=27.07 Aligned_cols=64 Identities=8% Similarity=0.079 Sum_probs=48.4
Q ss_pred HHhCC-CCCC-CEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRG-VNPG-DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~g-v~~g-d~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
..+.| +.+| +.|+ ....+-.-..+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 59 a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 34444 6777 5554 466666777778889999998887777666678888899999999998864
No 198
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=41.59 E-value=3.5e+02 Score=31.90 Aligned_cols=123 Identities=9% Similarity=0.027 Sum_probs=79.5
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.|+.+|++..+ .|.+| ....+|.+.+...+... ....++.++|++....+-+.+. +.-+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~T--SGSTG~PKgV~~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIFT--SGSTGRPKGVMVGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEeccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 46777776552 23223 22467777776544333 2345889999999888877554 33467778899998877
Q ss_pred cC--CCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc-----CCCCccEEEEecCC
Q 010535 133 YD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (508)
Q Consensus 133 ~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~ 183 (508)
++ ...++.+..+++..++.++.........+...... .+..++.++..+..
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEA 728 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCC
Confidence 65 45688899999999999988877655554433211 12456666555443
No 199
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=41.01 E-value=3.6e+02 Score=31.21 Aligned_cols=105 Identities=11% Similarity=-0.009 Sum_probs=71.6
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++ ....+|.+.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+.++.
T Consensus 780 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIFS--SGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEEC--CCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 46777776552 22222 2246788888776655543 34678889887776643 3333446777888988887
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
.....+.+.+...+++.++..+.........+.+
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 7666788899999999999999988776655543
No 200
>PRK10717 cysteine synthase A; Provisional
Probab=40.87 E-value=2.4e+02 Score=27.17 Aligned_cols=63 Identities=13% Similarity=0.135 Sum_probs=47.5
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.| +++|+.|+. ...+-.-..+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 56 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 56 EKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 3445 467776544 55566667777888889998887777777777888999999999999863
No 201
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=40.66 E-value=2.6e+02 Score=24.67 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=39.0
Q ss_pred cEEEEecCh--HHHHHHHH-HHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHH
Q 010535 267 DTYFSFLPL--AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVY 323 (508)
Q Consensus 267 ~~~l~~~pl--~~~~g~~~-~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~ 323 (508)
.+++...+. .|..|... ....-..|-.++.... .++.+.+.+++++++++..+-.+-
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~ 146 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMT 146 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccc
Confidence 344444444 57777653 4455557777776653 889999999999999987765433
No 202
>PRK07798 acyl-CoA synthetase; Validated
Probab=40.53 E-value=3.1e+02 Score=28.12 Aligned_cols=87 Identities=6% Similarity=-0.168 Sum_probs=64.5
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
-.+|...+...+..++..+.. .+...++++...++... --+...++++..|+..+.... ....+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~~--~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIA--QGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 468999998888888877643 26677888877765442 223356778888888887764 7889999999999999
Q ss_pred EEecchHHHHHH
Q 010535 316 FSGVPRVYDRIY 327 (508)
Q Consensus 316 ~~~~P~~~~~l~ 327 (508)
++........+.
T Consensus 104 ~~~~~~~~~~~~ 115 (533)
T PRK07798 104 LVYEREFAPRVA 115 (533)
T ss_pred EEEchhhHHHHH
Confidence 998876655543
No 203
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=40.49 E-value=2.6e+02 Score=26.46 Aligned_cols=64 Identities=9% Similarity=0.086 Sum_probs=47.7
Q ss_pred HHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+.+.| +.+|+.|+ ....+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 49 a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 49 AEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44445 47777664 555556667777788889998888877766667778899999999998864
No 204
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.36 E-value=2.5e+02 Score=29.17 Aligned_cols=106 Identities=12% Similarity=-0.015 Sum_probs=66.0
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAM-RSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L-~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++. ...+|...+.... .+..+ ...++.++|++..+.|-.-.+ ....++++..|+.++.
T Consensus 174 ~~~~~~~i~~T--SGTTG~PK~v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~ 249 (539)
T PRK07008 174 DENQASSLCYT--SGTTGNPKGALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVL 249 (539)
T ss_pred CcccceEEEEC--CCCCCCCcEEEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEE
Confidence 34555554331 333332 2356666654322 22222 234778899888777643222 2334677889998887
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
..+....+.+...++..++..+.........+.+
T Consensus 250 ~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~ 283 (539)
T PRK07008 250 PGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLN 283 (539)
T ss_pred ecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHh
Confidence 7777889999999999999998887766555543
No 205
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=40.17 E-value=3.1e+02 Score=28.04 Aligned_cols=103 Identities=15% Similarity=-0.002 Sum_probs=69.4
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH--HHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~--~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++ ....+|++.+...+.... ....+++++|++....+-...+ ...+++.+..|+.++.
T Consensus 159 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~ 234 (508)
T TIGR02262 159 QADDPAFWLYS--SGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVL 234 (508)
T ss_pred CCCCcEEEEeC--CCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEE
Confidence 45667765542 22222 234678888776554322 2344789999988777765433 3446667888998887
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPS 162 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 162 (508)
.+.......+...++..++.+++........
T Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 235 MGERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred eCCCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 7777788899999999999999887754443
No 206
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=40.11 E-value=3e+02 Score=26.03 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=47.0
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
.+.| +.+|+.|+. ...+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 51 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 51 EKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 3444 477776654 5556666777788889999888887776667777889999999999875
No 207
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=39.90 E-value=16 Score=25.16 Aligned_cols=7 Identities=57% Similarity=1.526 Sum_probs=6.2
Q ss_pred CccccCc
Q 010535 493 GWFHTGD 499 (508)
Q Consensus 493 gw~~TGD 499 (508)
-||.|||
T Consensus 73 hwydtgd 79 (80)
T PF05452_consen 73 HWYDTGD 79 (80)
T ss_pred ccccCCC
Confidence 3999998
No 208
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.88 E-value=2.6e+02 Score=28.94 Aligned_cols=102 Identities=14% Similarity=-0.019 Sum_probs=69.1
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH--hHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~--~~~~~~lA~~~~G~~~v~ 131 (508)
.++.+|++..+ .+.++ ....+|++.+...+...... .++..+|++....|-.- .++..+++.+..|+.++.
T Consensus 188 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~ 262 (546)
T PRK08314 188 GPDDLAVLPYT--SGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVL 262 (546)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEe
Confidence 45677776542 22222 23467888887766554433 35678898877776532 234567788999998887
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhH
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (508)
.++ ...+.+...++..++..+.........+
T Consensus 263 ~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 263 MPR-WDREAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred cCC-CCHHHHHHHHHHhcCceecccHHHHHHH
Confidence 754 6778888999999999988776655444
No 209
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=39.83 E-value=3.9e+02 Score=27.40 Aligned_cols=85 Identities=8% Similarity=-0.058 Sum_probs=65.0
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .++..++++....+...-+- ...++++..|+..+.... ..+.+...+++.++..+
T Consensus 37 ~~ty~~l~~~v~~la~~L~~--~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 113 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYS--LGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINARLLREESAWILQNSQASLL 113 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEE
Confidence 57888888888888776533 36778899988877664332 356688889988877654 88999999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+.....+
T Consensus 114 ~~~~~~~~~~ 123 (517)
T PRK08008 114 VTSAQFYPMY 123 (517)
T ss_pred EEecchhHHH
Confidence 9988765543
No 210
>PRK07529 AMP-binding domain protein; Validated
Probab=39.71 E-value=2.6e+02 Score=29.88 Aligned_cols=99 Identities=8% Similarity=-0.022 Sum_probs=68.2
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++....+.. ..+...+|.+.+...+..++..+.. .+..+++++...+|-..-+ +..+++++..|. ++.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~--~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHS--LGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPI 112 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeC
Confidence 345666655433211 1235678999999999988887744 3678899999888866433 334666677774 3333
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecch
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPR 321 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~ 321 (508)
.. .++.+...+++.++..++....
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~~~ 138 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTLGP 138 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEeCC
Confidence 32 8899999999999999998643
No 211
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.53 E-value=1.9e+02 Score=30.26 Aligned_cols=85 Identities=9% Similarity=-0.033 Sum_probs=66.2
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|+..+...+..++..+.. .++..+|++...+|-..- -+...++++..|+..+.... ..+.+...+.+.++..+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~--~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRA--LGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 47999999988888877643 267788999888776543 23357788888988887654 88999999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+.....+..+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9887766554
No 212
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=39.33 E-value=2.5e+02 Score=29.24 Aligned_cols=86 Identities=9% Similarity=0.059 Sum_probs=65.7
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|+..+...+..++..+... ++..++++...++-..-+ +..+++++..|+..+.... ....+...+++.++..
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSL--GLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKL 130 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeE
Confidence 4689999999998888776443 677889988887766433 2356788888998776653 7788999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++..+..+..+
T Consensus 131 ~i~~~~~~~~~ 141 (546)
T PLN02330 131 IVTNDTNYGKV 141 (546)
T ss_pred EEEccchhhhH
Confidence 98877766544
No 213
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=39.25 E-value=36 Score=24.16 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=15.4
Q ss_pred HHHHHHhCCCCCCCEEEEE
Q 010535 90 FGSAMRSRGVNPGDRCGIY 108 (508)
Q Consensus 90 ~A~~L~~~gv~~gd~Vai~ 108 (508)
+-..|++.|++.||.|.|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4466778899999999875
No 214
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=39.07 E-value=26 Score=24.92 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEE
Q 010535 85 DAAIRFGSAMRSRGVNPGDRCGI 107 (508)
Q Consensus 85 ~~v~~~A~~L~~~gv~~gd~Vai 107 (508)
=+...+-..|++.|++.||+|.|
T Consensus 40 L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 40 LKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHCCHHHHHHHcCCCCCCEEEE
Confidence 33444557788889999999976
No 215
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=39.04 E-value=2.8e+02 Score=28.92 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=71.5
Q ss_pred EEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe--cCC
Q 010535 223 STIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW--RGD 300 (508)
Q Consensus 223 ~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~--~~~ 300 (508)
..++|-+-.++. -.+|.+.+...+..++..+... .+. ++|++...+|..-- ..+.++++.-.|+..... -+.
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~-~gv-kGDrV~iymp~~pe-~~~a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDL-GGV-KGDRVAIYMPNSPE-AVIALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHh-CCC-CCCEEEEEcCCCHH-HHHHHHHHHHcCCEEeecccCCC
Confidence 345565554444 6789999999998888877322 235 99999999997742 234567778888654433 249
Q ss_pred HhhHHHHhhhhcCeEEEecchHHHHH
Q 010535 301 VRYLMEDIQELKPTMFSGVPRVYDRI 326 (508)
Q Consensus 301 ~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (508)
+..+...+...++.++++....++..
T Consensus 101 ~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 101 AEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred HHHHHHHHHccCCCEEEEeccccccc
Confidence 99999999999999999888777744
No 216
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=38.78 E-value=4.6e+02 Score=27.02 Aligned_cols=105 Identities=9% Similarity=-0.031 Sum_probs=69.8
Q ss_pred hCCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH---HHHHHHhcCCEE
Q 010535 55 RIPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII---AMEACNSQAITY 129 (508)
Q Consensus 55 ~~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~---~~lA~~~~G~~~ 129 (508)
..++++|++..+ .+.++ ....+|.+.+...+.... ...++..+|++...+|..-.+-. ..++++..|+..
T Consensus 180 ~~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~ 254 (527)
T TIGR02275 180 TKSDEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCV 254 (527)
T ss_pred CCCCccEEEEeC--CCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeE
Confidence 356777776542 22222 234678888776655533 34567889999888876533322 357778889887
Q ss_pred EeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
+.. +...+..+...++..++.+++........+..
T Consensus 255 v~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 255 VLA-PDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred EEC-CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 654 44567888889999999999988776655443
No 217
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=38.77 E-value=21 Score=22.91 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=22.2
Q ss_pred EEEEeecCCCCHHHHHHHHHhcCCce
Q 010535 386 QAMLSGAAPLPIHVEEFLRVTSGAPL 411 (508)
Q Consensus 386 ~~i~~gG~~l~~~~~~~~~~~~~~~l 411 (508)
+.+.++|.|++.+....++..+|-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 67899999999999999998876543
No 218
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=38.71 E-value=3.2e+02 Score=25.24 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhc------C--CEEEeccCCC---CHHHHHHHHHhcCceEE
Q 010535 86 AAIRFGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQ------A--ITYVPLYDTL---GANAVEFIINHAEVSIA 153 (508)
Q Consensus 86 ~v~~~A~~L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~v 153 (508)
..+++...+.+.+ +.+|++|+|...-+.++++++..+..+ + ..++-++... ..+.+..+.+..+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3445555677765 688999999999999998887766442 2 3455566543 34445666777777766
Q ss_pred EEc
Q 010535 154 FVQ 156 (508)
Q Consensus 154 i~~ 156 (508)
+.+
T Consensus 92 v~~ 94 (258)
T PRK10696 92 IEE 94 (258)
T ss_pred EEE
Confidence 654
No 219
>PRK07514 malonyl-CoA synthase; Validated
Probab=38.47 E-value=2.4e+02 Score=28.79 Aligned_cols=87 Identities=11% Similarity=0.053 Sum_probs=66.5
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
+..+|...+...+..++..+.. .++..++++...++... -.....++++..|+..+.... ....+...++..+++
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~--~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 102 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVA--LGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPA 102 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCc
Confidence 3478999988888888776643 36788999888877653 333356788889988887654 788899999999999
Q ss_pred EEEecchHHHHH
Q 010535 315 MFSGVPRVYDRI 326 (508)
Q Consensus 315 ~~~~~P~~~~~l 326 (508)
.++..+.....+
T Consensus 103 ~ii~~~~~~~~~ 114 (504)
T PRK07514 103 LVVCDPANFAWL 114 (504)
T ss_pred EEEEccchhHHH
Confidence 999988776654
No 220
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=37.47 E-value=68 Score=28.20 Aligned_cols=33 Identities=15% Similarity=0.386 Sum_probs=29.1
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIY 108 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~ 108 (508)
.-+||.++.+.+.++|..+.+-|.++.-.|++.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 579999999999999999999999887666664
No 221
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=37.35 E-value=3.9e+02 Score=25.76 Aligned_cols=72 Identities=13% Similarity=0.159 Sum_probs=53.2
Q ss_pred HHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcC
Q 010535 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL 167 (508)
Q Consensus 93 ~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (508)
-|+..|+++|.+|+|..--..-++...+|.. .|.-+..|+.. ...-+..++..++...+...+..+......
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~--~~kkeea~~~LGAd~fv~~~~d~d~~~~~~ 244 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTS--SKKKEEAIKSLGADVFVDSTEDPDIMKAIM 244 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCC--chhHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence 4677899999999999999999998888876 46666666653 335566788899998887765554443333
No 222
>PLN02574 4-coumarate--CoA ligase-like
Probab=37.15 E-value=1.8e+02 Score=30.50 Aligned_cols=86 Identities=10% Similarity=0.097 Sum_probs=64.9
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+... .++..+|++...++-.. -.+..+++++..|+..+.... ....+...+++.++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~-~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHV-MGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 478888888888887766320 26788999998887553 333356788889998887664 78889999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 8887765554
No 223
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=37.02 E-value=2e+02 Score=30.64 Aligned_cols=97 Identities=15% Similarity=0.201 Sum_probs=70.6
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++. -+..+|. .-.+|.+.+...+..++..+.. .++.++|++...+|..- -.+..+++++..|+..+...
T Consensus 66 p~~~Al~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~Gd~V~i~~~n~~-e~v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 66 GEQLALVT-VSSETGQ--ERTLTYRQLHREVNVFASALRA--LGVGRGDRVLIYMPMIA-EAVFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecC
Confidence 45666543 2222232 2468999999999988887744 37889999999988763 33345778888998877665
Q ss_pred C--CHhhHHHHhhhhcCeEEEecch
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (508)
. ....+...++..++.++++...
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~~ 164 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSADA 164 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECCc
Confidence 3 8889999999999999988654
No 224
>PRK09088 acyl-CoA synthetase; Validated
Probab=36.93 E-value=4e+02 Score=27.05 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=62.2
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|+..+...+..+...+.. .+...++++...++-..- .+...++++..|+..+.... ..+.+...+++.+++.
T Consensus 21 ~~~ty~~l~~~v~~~a~~l~~--~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 97 (488)
T PRK09088 21 RRWTYAELDALVGRLAAVLRR--RGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRL 97 (488)
T ss_pred cEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCE
Confidence 368999999988888777643 257788988888776643 23346788888988887764 7889999999999999
Q ss_pred EEecchH
Q 010535 316 FSGVPRV 322 (508)
Q Consensus 316 ~~~~P~~ 322 (508)
++.....
T Consensus 98 ii~~~~~ 104 (488)
T PRK09088 98 LLGDDAV 104 (488)
T ss_pred EEEcchh
Confidence 9876543
No 225
>PRK06839 acyl-CoA synthetase; Validated
Probab=36.55 E-value=4.7e+02 Score=26.51 Aligned_cols=88 Identities=7% Similarity=-0.073 Sum_probs=66.4
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
...+|+..+...+..++..+.. ..++.+++++...++-... .....++++..|+..+.... +...+...+++.+++
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~-~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 102 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIY-ELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTT 102 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCce
Confidence 3578999999988888776522 1256788888888776632 33457788888988887764 788888999999999
Q ss_pred EEEecchHHHHH
Q 010535 315 MFSGVPRVYDRI 326 (508)
Q Consensus 315 ~~~~~P~~~~~l 326 (508)
.++..+.....+
T Consensus 103 ~i~~~~~~~~~~ 114 (496)
T PRK06839 103 VLFVEKTFQNMA 114 (496)
T ss_pred EEEEcHHHHHHH
Confidence 999988776554
No 226
>PRK05850 acyl-CoA synthetase; Validated
Probab=36.51 E-value=4.1e+02 Score=27.80 Aligned_cols=86 Identities=13% Similarity=0.042 Sum_probs=65.7
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHhhHHHHhhhhc
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELK 312 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~ 312 (508)
..+|+..+...+..++..+... + .++|++...++... --+...++++..|+..+.... ..+.+...++..+
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~--g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~ 109 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRH--G-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTS 109 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHh--C-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcC
Confidence 5689999999888888877543 2 46888888887553 333357788899998887752 5678999999999
Q ss_pred CeEEEecchHHHHHH
Q 010535 313 PTMFSGVPRVYDRIY 327 (508)
Q Consensus 313 ~t~~~~~P~~~~~l~ 327 (508)
+..++..+.....+.
T Consensus 110 ~~~il~~~~~~~~~~ 124 (578)
T PRK05850 110 PSVVLTTSAVVDDVT 124 (578)
T ss_pred CCEEEEcHHHHHHHH
Confidence 999999888776653
No 227
>PLN02614 long-chain acyl-CoA synthetase
Probab=35.92 E-value=5.9e+02 Score=27.44 Aligned_cols=86 Identities=10% Similarity=-0.069 Sum_probs=66.0
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|++.+...+..++..+.. .++.++|++...++-..- -+...++++..|+..+-... .++.+...+++.++.+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRS--VGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 357999999998888877643 377889999888876532 22357788888988877654 8899999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++.....+..+
T Consensus 155 vi~~~~~~~~~ 165 (666)
T PLN02614 155 VFVEEKKISEL 165 (666)
T ss_pred EEECHHHHHHH
Confidence 99877655544
No 228
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=35.39 E-value=1.3e+02 Score=28.24 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=52.7
Q ss_pred CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEE-eccCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010535 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV-PLYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 161 (508)
.+++||.|+=-..||.=--+.+--|...|..-+ .+..+-..+++...|...++..+|++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 578999999999998777667777777887544 5577888999999999999999999987553
No 229
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.35 E-value=2.6e+02 Score=28.56 Aligned_cols=86 Identities=9% Similarity=-0.111 Sum_probs=66.5
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..+...+... +...++++....+-.. -.+..+++++..|+..+..+. ....+...+++.+++.
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~--g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRAL--GLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 3578888888888887776443 6788999988877663 334457788999998887764 7888999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++..+.....+
T Consensus 87 ii~~~~~~~~~ 97 (502)
T PRK08276 87 LIVSAALADTA 97 (502)
T ss_pred EEEccchhhHH
Confidence 99888766554
No 230
>PRK07638 acyl-CoA synthetase; Validated
Probab=34.95 E-value=5e+02 Score=26.34 Aligned_cols=87 Identities=10% Similarity=-0.014 Sum_probs=62.9
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 154 (508)
..+|.+.+...+...+ ...+++.+|++....+-... ++...+..+..|+.++.. +...++++...++..++.++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4677777765554433 34478899998877655433 345666778889888755 567889999999999999999
Q ss_pred EcCCChhhHhhc
Q 010535 155 VQENKIPSILSC 166 (508)
Q Consensus 155 ~~~~~~~~~~~~ 166 (508)
........+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 988777766554
No 231
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=34.72 E-value=72 Score=29.85 Aligned_cols=75 Identities=16% Similarity=0.046 Sum_probs=48.0
Q ss_pred cEEEEEeecCCC--CHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCC
Q 010535 384 RLQAMLSGAAPL--PIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALS 461 (508)
Q Consensus 384 ~l~~i~~gG~~l--~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~ 461 (508)
+|-.-++|++.- ...+.++|++.|+-..-+.|=++|+-+......+.... |-+=..-.|...+.++ +||....++
T Consensus 70 ~lgL~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t~g~~~--GiVLiaGTgs~crl~~-~DGs~~~~g 146 (336)
T KOG1794|consen 70 SLGLGLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAATPGGEG--GIVLIAGTGSNCRLVN-PDGSEKGAG 146 (336)
T ss_pred eeeeecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhcCCCCCC--cEEEEecCCceeEEEC-CCCCccCCC
Confidence 555556666543 44788889998877777788899987666655553322 2222223467778888 888765543
No 232
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=34.50 E-value=3.4e+02 Score=29.20 Aligned_cols=87 Identities=10% Similarity=-0.027 Sum_probs=66.9
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|++.+...+..++..+.. .++.++|++...++-..- -++..++++..|+..+.... ..+.+...+++.++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRS--RGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 468999999999988887643 367899999888876532 23356788889988877654 8899999999999999
Q ss_pred EEecchHHHHHH
Q 010535 316 FSGVPRVYDRIY 327 (508)
Q Consensus 316 ~~~~P~~~~~l~ 327 (508)
++.....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998776655543
No 233
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=33.74 E-value=1.1e+02 Score=24.03 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCE
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~ 128 (508)
..+...+.+.|+.+++.|++++.++..+..+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677889989999999999888888888888888874
No 234
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=33.40 E-value=4.3e+02 Score=27.32 Aligned_cols=83 Identities=11% Similarity=-0.028 Sum_probs=63.1
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCe
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t 314 (508)
...+|...+...+..++..+.. .++..++++...++-.. -.+...++++..|+.++.... ..+.+...++..+++
T Consensus 51 ~~~~Ty~eL~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 127 (538)
T TIGR03208 51 VRRFSYRELDCRVDRIAVGLAR--LGVGRGDVVSFQLPNRW-EFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSK 127 (538)
T ss_pred cceecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCe
Confidence 3468999999988888877643 36778999988877543 223456788889988776654 788899999999999
Q ss_pred EEEecchH
Q 010535 315 MFSGVPRV 322 (508)
Q Consensus 315 ~~~~~P~~ 322 (508)
.++..+..
T Consensus 128 ~li~~~~~ 135 (538)
T TIGR03208 128 VFVVPSVF 135 (538)
T ss_pred EEEEcccc
Confidence 99886653
No 235
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=33.19 E-value=2.4e+02 Score=27.79 Aligned_cols=65 Identities=14% Similarity=0.022 Sum_probs=41.8
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccC-----CCCHHHHHHHHHh---cCceEEEE
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINH---AEVSIAFV 155 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi~ 155 (508)
..+...+...++++||.|++-.+.. ....-++...|+.++.++. ..+.+.+...++. -+.++++.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 4444555566788999977776543 3445666788887776543 2467788887763 35566653
No 236
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.09 E-value=4.9e+02 Score=27.25 Aligned_cols=105 Identities=14% Similarity=-0.026 Sum_probs=67.9
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.|+.++++..+ .|.++. ...+|++.+...+..+. .....++..+|++...+|-.-.+ ....++.+..|...+..
T Consensus 179 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~ 255 (576)
T PRK05620 179 DETTAAAICYS--TGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFP 255 (576)
T ss_pred CccceeEEEEC--CCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEec
Confidence 44566665542 232232 23678777754433321 12235788899988887765332 34457778888888776
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhH
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (508)
.+..+++.+...++..++.+++........+
T Consensus 256 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 256 GPDLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 6677899999999999999998876655443
No 237
>PRK05852 acyl-CoA synthetase; Validated
Probab=33.05 E-value=5.6e+02 Score=26.39 Aligned_cols=88 Identities=11% Similarity=-0.067 Sum_probs=62.0
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH--hHHHHHHHHHhcCCEEEe-ccCCCCHHHHHHHHHhcCceE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP-LYDTLGANAVEFIINHAEVSI 152 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 152 (508)
..+|++.+...+..+...+ +++++|++....|..- .++..+++++..|..++. -....++..+...++..++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4568888877666655433 6788998887777543 345567777777776543 234567788889999999999
Q ss_pred EEEcCCChhhHhhc
Q 010535 153 AFVQENKIPSILSC 166 (508)
Q Consensus 153 vi~~~~~~~~~~~~ 166 (508)
++........+...
T Consensus 271 ~~~~P~~~~~l~~~ 284 (534)
T PRK05852 271 YTAVPTIHQILLER 284 (534)
T ss_pred EEcChHHHHHHHhh
Confidence 99888776666543
No 238
>PRK08162 acyl-CoA synthetase; Validated
Probab=32.91 E-value=2.7e+02 Score=28.88 Aligned_cols=85 Identities=9% Similarity=-0.055 Sum_probs=66.6
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .+...++++...++-.. --+...++++..|+..+.... ....+...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~--~g~~~g~~v~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALAR--RGIGRGDTVAVLLPNIP-AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCch-HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 58999999999888877643 36778999988877654 223356778888888777664 78999999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+.....+
T Consensus 120 ~~~~~~~~~~ 129 (545)
T PRK08162 120 IVDTEFAEVA 129 (545)
T ss_pred EEccchhhHH
Confidence 9988776654
No 239
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=32.66 E-value=5.8e+02 Score=26.38 Aligned_cols=104 Identities=13% Similarity=0.015 Sum_probs=69.7
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH---HHHHHHHHhcCCEEE
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW---IIAMEACNSQAITYV 130 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~---~~~~lA~~~~G~~~v 130 (508)
.++.++++..+ .+.++ ....+|.+.+...+..... ..++.++|++...+|-.-.+ ...+++++..|+.++
T Consensus 180 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~ 254 (536)
T PRK10946 180 PADEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVV 254 (536)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEE
Confidence 35666665441 23333 2357788888887665543 34688899988887754332 224678888899887
Q ss_pred eccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
... ..........++..++.++.........+..
T Consensus 255 ~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 255 LAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred ECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 554 4567778888999999999887766655543
No 240
>PRK13382 acyl-CoA synthetase; Provisional
Probab=32.38 E-value=3.3e+02 Score=28.21 Aligned_cols=85 Identities=8% Similarity=-0.155 Sum_probs=65.3
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .+..+++++...++.... -+...++++..|+.++.... ....+...+++.+++.+
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~--~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 144 (537)
T PRK13382 68 TLTWRELDERSDALAAALQA--LPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTV 144 (537)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEE
Confidence 58888888888888776633 367789999888875543 33467788899999887765 77899999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+........+
T Consensus 145 i~~~~~~~~~ 154 (537)
T PRK13382 145 IYDEEFSATV 154 (537)
T ss_pred EEchhhHHHH
Confidence 8876655443
No 241
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=32.09 E-value=87 Score=29.47 Aligned_cols=53 Identities=9% Similarity=0.040 Sum_probs=43.2
Q ss_pred eEeeHHHHHH-----HHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCE
Q 010535 76 VWLTYQEVYD-----AAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (508)
Q Consensus 76 ~~~Ty~~l~~-----~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~ 128 (508)
..+.|.++.+ ....+...|.+.|+.+++.|.+++.+...+..+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4577777763 2456667778889999999999999999999999999989975
No 242
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=32.08 E-value=4.2e+02 Score=24.93 Aligned_cols=65 Identities=9% Similarity=0.117 Sum_probs=48.1
Q ss_pred HHhCCC-CCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010535 94 MRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (508)
Q Consensus 94 L~~~gv-~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (508)
+.+.|. ++|+.|+. ...+-....+.++|..+|..+..+-|..........++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 344453 35666544 566667777888899999988877776666677788999999999998764
No 243
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=32.07 E-value=2.1e+02 Score=28.30 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEE
Q 010535 89 RFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 89 ~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 154 (508)
.+...|...++++||.|++-.+. +.....++...|+.++.++.. .+.+.+...+.. +.++++
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445556678899988765543 333345566788887766532 356777776643 455555
No 244
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=31.79 E-value=3.1e+02 Score=28.60 Aligned_cols=85 Identities=7% Similarity=0.014 Sum_probs=64.7
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|+..+...+..++..+... ++..++++...++-..-. +...++++..|+..+.... ....+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~--gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSR--GLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 4689999999998888876442 677889988887755422 3346788889998887654 7889999999999999
Q ss_pred EEecchHHHH
Q 010535 316 FSGVPRVYDR 325 (508)
Q Consensus 316 ~~~~P~~~~~ 325 (508)
++........
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 9887665443
No 245
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=31.46 E-value=87 Score=22.85 Aligned_cols=39 Identities=15% Similarity=0.122 Sum_probs=32.7
Q ss_pred HHHHhC-CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEE
Q 010535 92 SAMRSR-GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 130 (508)
Q Consensus 92 ~~L~~~-gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v 130 (508)
.+|.+. ||+.|+.++.+.....|.+..+=|++++.-+-+
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 456654 999999999999999999999999988876543
No 246
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=31.21 E-value=3.9e+02 Score=27.10 Aligned_cols=64 Identities=11% Similarity=0.031 Sum_probs=47.6
Q ss_pred HHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
..+.| +.+|+.|+. ...+-.-..+.++|..+|..+..+-|...+.+....++..++++++++..
T Consensus 53 a~~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 53 AEASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 33445 467776544 45666677788899999998887777666667778889999999998753
No 247
>PRK07787 acyl-CoA synthetase; Validated
Probab=31.07 E-value=5.2e+02 Score=26.13 Aligned_cols=102 Identities=12% Similarity=-0.014 Sum_probs=68.4
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--cHhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .+.++. ...+|++.+...+..++. ..++.++|++...+|- ...++..+++.+..|+.++.
T Consensus 126 ~~~~~a~i~~T--SGTTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 126 DPDAPALIVYT--SGTTGPPKGVVLSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred CCCceEEEEEC--CCCCCCCCEEEEeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 45667665541 333332 246788888776655554 3467888887666654 23446668889999999886
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSIL 164 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 164 (508)
.. ...++.+...++ .++..+.........+.
T Consensus 201 ~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 201 TG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred cC-CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 65 467888888998 88888887766555544
No 248
>PRK13391 acyl-CoA synthetase; Provisional
Probab=30.83 E-value=5.6e+02 Score=26.18 Aligned_cols=99 Identities=11% Similarity=0.015 Sum_probs=71.5
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++...++ -.+|...+...+..+...+.. .+...++++...++-..-+ +...++++..|..++..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~--~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRS--LGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecc
Confidence 3456666554332 258999998888888877643 2667788888777655432 23466888889888877
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchHHHHH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (508)
.. +...+...++..++..+...+.....+
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 64 788999999999999999888766544
No 249
>PLN02479 acetate-CoA ligase
Probab=30.72 E-value=3.7e+02 Score=28.09 Aligned_cols=85 Identities=6% Similarity=-0.105 Sum_probs=66.1
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+... ++.++|++...++..- -.+...++++..|+..+.... ....+...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~--g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKR--SIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 579999999998888877432 6788999988887543 223356788889988877764 78899999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+..+..+...
T Consensus 122 i~~~~~~~~~ 131 (567)
T PLN02479 122 MVDQEFFTLA 131 (567)
T ss_pred EEchhhhhHH
Confidence 9987765543
No 250
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.65 E-value=5.1e+02 Score=26.99 Aligned_cols=86 Identities=9% Similarity=-0.009 Sum_probs=64.5
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|+..+...+..++..+.. ..+...++++...++...-+ ....++++..|+..+.... ..+.+...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~-~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQ-HTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 368999999998888876622 02577899999888765322 3356788889988887654 8889999999999999
Q ss_pred EEecchHHHH
Q 010535 316 FSGVPRVYDR 325 (508)
Q Consensus 316 ~~~~P~~~~~ 325 (508)
++........
T Consensus 126 ii~~~~~~~~ 135 (562)
T PRK05677 126 LVCLANMAHL 135 (562)
T ss_pred EEEecchhhh
Confidence 9887665443
No 251
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=30.56 E-value=2.9e+02 Score=29.36 Aligned_cols=97 Identities=18% Similarity=0.210 Sum_probs=70.0
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++. .+..+|. .-.+|.+.+...+..++..+.. .+...+|++...+|..- -.+...++++..|+..+...
T Consensus 67 p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 67 PEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRS--LGVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeC
Confidence 45666543 3222222 3468999999998888877643 37889999999987653 22335777888898877665
Q ss_pred C--CHhhHHHHhhhhcCeEEEecch
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (508)
. ....+...++..++.+++....
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEccC
Confidence 3 8889999999999999988654
No 252
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=30.22 E-value=8.3e+02 Score=28.28 Aligned_cols=121 Identities=11% Similarity=-0.006 Sum_probs=75.4
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (508)
.|+.++++..+ .+.++ ....+|.+.+...+...+. ..++.++|++...+|-. ..+...++..+..|...+.
T Consensus 791 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILFT--SGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEEC--CCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 56777776542 23223 2246788888766665554 34678899988887753 2233456677788988877
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc-cCCCCccEEEEec
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKTIVSFA 181 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 181 (508)
.+.....+.+...+++.++..+.........+..... .....++.++.-.
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg 916 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGA 916 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcC
Confidence 6655556677788889999998887665544433221 1223455554443
No 253
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=30.14 E-value=5e+02 Score=26.02 Aligned_cols=66 Identities=9% Similarity=-0.060 Sum_probs=53.0
Q ss_pred CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEec--cCCCCHHHHHHHHHhcCceEEEEcCCChhhH
Q 010535 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL--YDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (508)
.-=+|-+|+++++-.++....+..+..+|+-+... ||..+.++....|...+..++-......+..
T Consensus 28 ~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ey 95 (406)
T TIGR00936 28 KPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEEY 95 (406)
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHHH
Confidence 33468899999999999999999999999987655 8888899999999988888665554444433
No 254
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=30.11 E-value=4.5e+02 Score=24.40 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=49.8
Q ss_pred CCHHHHH---HHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHH--HHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhH
Q 010535 43 ESPWQFF---CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVY--DAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEW 115 (508)
Q Consensus 43 ~t~~~~l---~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~--~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~ 115 (508)
.++.++| .+.-+.+++-+.+. +||.... .-.+++...+.+.|+ =+++.|+- .+.
T Consensus 69 ~~~~~~~~~~~~ir~~~~~~pivl--------------m~Y~N~i~~~G~e~F~~~~~~aGv-----dGlIipDLP~ee~ 129 (259)
T PF00290_consen 69 FTLEKIFELVKEIRKKEPDIPIVL--------------MTYYNPIFQYGIERFFKEAKEAGV-----DGLIIPDLPPEES 129 (259)
T ss_dssp --HHHHHHHHHHHHHHCTSSEEEE--------------EE-HHHHHHH-HHHHHHHHHHHTE-----EEEEETTSBGGGH
T ss_pred CCHHHHHHHHHHHhccCCCCCEEE--------------EeeccHHhccchHHHHHHHHHcCC-----CEEEEcCCChHHH
Confidence 3444444 44333567776653 6776643 337788888888876 34444442 333
Q ss_pred HHHHHHHHhcCCEEEec-cCCCCHHHHHHHHHhcC
Q 010535 116 IIAMEACNSQAITYVPL-YDTLGANAVEFIINHAE 149 (508)
Q Consensus 116 ~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~ 149 (508)
-...=+|...|...+++ .|..+.++++.+.+.++
T Consensus 130 ~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~ 164 (259)
T PF00290_consen 130 EELREAAKKHGLDLIPLVAPTTPEERIKKIAKQAS 164 (259)
T ss_dssp HHHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-S
T ss_pred HHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 44444577788776655 77788888888776644
No 255
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=29.51 E-value=1.9e+02 Score=27.78 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=46.4
Q ss_pred CCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 97 ~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.|..+++.|+... .+-.-..+.++|...|..++.+-|...+......++..++++++++..
T Consensus 46 ~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 46 QGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3434456655544 455667777889999998888888777788888999999999998765
No 256
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=29.38 E-value=1.5e+02 Score=22.57 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=38.9
Q ss_pred eEeeHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCE
Q 010535 76 VWLTYQEVYDA----AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (508)
Q Consensus 76 ~~~Ty~~l~~~----v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~ 128 (508)
..+.+.++.+. ...+...+...++.+++.|++++.+...+..+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 34566665443 235666777778888899999999988877778888888864
No 257
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=29.37 E-value=6.2e+02 Score=25.70 Aligned_cols=103 Identities=7% Similarity=-0.063 Sum_probs=68.9
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH-hHHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~-~~~~~~lA~~~~G~~~v~l 132 (508)
.++.++++..+ .+.++ ....+|++.+...+..+.. ..++..++++....|-+. ..+..+++++..|+..+..
T Consensus 139 ~~~~~~~il~T--SGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 213 (502)
T TIGR01734 139 KGDDNYYIIYT--SGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCL 213 (502)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEc
Confidence 34556655441 23333 2347888888766554433 357788888877766543 2355677889999999888
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhH
Q 010535 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSI 163 (508)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (508)
++. .....+...+...++..+.........+
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 214 DKDITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred CHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 764 4567888889999999888877665543
No 258
>PRK10595 SOS cell division inhibitor; Provisional
Probab=29.35 E-value=2.5e+02 Score=23.95 Aligned_cols=66 Identities=11% Similarity=-0.059 Sum_probs=45.1
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEecc--C-CCCHHHHHHH---HHhcCceEEEE
Q 010535 90 FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D-TLGANAVEFI---INHAEVSIAFV 155 (508)
Q Consensus 90 ~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~--~-~~~~~~l~~~---l~~~~~~~vi~ 155 (508)
.+.+|.+.|+..+..+.|...+..+.+.++-=|++.|..-+.|- | .++.+.++.+ -+..++-.++.
T Consensus 69 ~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 69 SREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred CHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 46788899998777777777788899999999999997555443 3 6665554443 33444444444
No 259
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=29.23 E-value=4.4e+02 Score=23.91 Aligned_cols=64 Identities=8% Similarity=-0.032 Sum_probs=45.9
Q ss_pred HHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+.+.|..+++.|+.. ..+-....+.++|...|..++.+-|..........++..+++++.++..
T Consensus 42 a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 42 AEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 334443245555444 4456667777788889998888877777788888899999999999876
No 260
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=29.23 E-value=4.4e+02 Score=28.58 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=67.1
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+.. .++.+++++...++-..- -++..++++..|+..+-... .++.+...+...++.+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~--lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVA--LGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 457999999888888776533 367889998888775532 22356778888988886653 8899999999999999
Q ss_pred EEecchHHHHHHH
Q 010535 316 FSGVPRVYDRIYT 328 (508)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (508)
+++....+..+..
T Consensus 182 li~~~~~~~~l~~ 194 (696)
T PLN02387 182 VICDSKQLKKLID 194 (696)
T ss_pred EEECHHHHHHHHH
Confidence 9998877766644
No 261
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=28.84 E-value=2.6e+02 Score=28.54 Aligned_cols=58 Identities=21% Similarity=0.093 Sum_probs=42.9
Q ss_pred cCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec----C-CHhhHHHHhhhhcCeEEEecchHH
Q 010535 262 VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR----G-DVRYLMEDIQELKPTMFSGVPRVY 323 (508)
Q Consensus 262 ~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~----~-~~~~~~~~i~~~~~t~~~~~P~~~ 323 (508)
...++|++++-.|-++..-.++ -..|..++-.+ + +++.+-+.++++++..++.+|++-
T Consensus 175 l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 175 LLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred hCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 4568999999888876433222 23566666543 2 899999999999999999999863
No 262
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=28.79 E-value=2.1e+02 Score=29.14 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=48.4
Q ss_pred hCCCCCCCEEEEEcC-CcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010535 96 SRGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (508)
Q Consensus 96 ~~gv~~gd~Vai~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 161 (508)
-.|..+...|.+.-| =+...+.+=+-=+..-++.+|++.++.-..+..++...+++++++.+....
T Consensus 412 ~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytq 478 (653)
T KOG1138|consen 412 CWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQ 478 (653)
T ss_pred HhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcC
Confidence 345555556665555 344445555555566778899999999999999999999999999876544
No 263
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=27.97 E-value=2.3e+02 Score=28.70 Aligned_cols=55 Identities=11% Similarity=0.152 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEEEc
Q 010535 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (508)
++++||.|++-.+.. .....++...|+.+++++.. .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 788899887765544 34445566778877766432 356666666543 45665554
No 264
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=27.73 E-value=3e+02 Score=27.87 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=12.1
Q ss_pred HHHHHHHHhcCC-ceeeeccccCCCc
Q 010535 398 HVEEFLRVTSGA-PLTQGYGLTESCS 422 (508)
Q Consensus 398 ~~~~~~~~~~~~-~l~~~YG~TE~~~ 422 (508)
+...+|.+.+.+ .+-..+|-+|+..
T Consensus 351 ~~~~~f~~~l~l~~~a~slGg~~Slv 376 (432)
T PRK06702 351 EAAKEFIANVKLATLVTHVADARTCV 376 (432)
T ss_pred HHHHHHHHhCccceeccccCCCCcce
Confidence 334445444332 4455566666543
No 265
>PLN02356 phosphateglycerate kinase
Probab=27.64 E-value=4.8e+02 Score=26.33 Aligned_cols=64 Identities=14% Similarity=0.044 Sum_probs=45.9
Q ss_pred HHHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 93 AMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 93 ~L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
.+.+.| +++|.+|+ .....-..+.+.++|...|..++.+-|...+.+....++..++.+++++.
T Consensus 94 ~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 94 EALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 344444 34666554 34444457788888999999888777776667777899999999999853
No 266
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=27.62 E-value=4.2e+02 Score=27.10 Aligned_cols=87 Identities=2% Similarity=-0.132 Sum_probs=65.4
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..+...+.. .++..++++...+|...- .+...++++..|+..+.... ....+...++..+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~~--~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAA--LGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 56888888888877776533 367889999888776532 23356778888888887764 78999999999999999
Q ss_pred EecchHHHHHHH
Q 010535 317 SGVPRVYDRIYT 328 (508)
Q Consensus 317 ~~~P~~~~~l~~ 328 (508)
+........+..
T Consensus 88 ~~~~~~~~~~~~ 99 (509)
T PRK12406 88 IAHADLLHGLAS 99 (509)
T ss_pred EEccchhhhhhh
Confidence 988877665543
No 267
>PRK06381 threonine synthase; Validated
Probab=27.22 E-value=2.3e+02 Score=27.11 Aligned_cols=62 Identities=10% Similarity=-0.071 Sum_probs=45.2
Q ss_pred HHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010535 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (508)
Q Consensus 94 L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (508)
+.+.|. ++| +.....-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 58 a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 58 AMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 345553 344 44556677778888899999988777666666666678999999999998753
No 268
>PRK07476 eutB threonine dehydratase; Provisional
Probab=27.15 E-value=3.8e+02 Score=25.73 Aligned_cols=51 Identities=12% Similarity=-0.074 Sum_probs=40.3
Q ss_pred EcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 108 YGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 108 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
....+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 72 TASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred EECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 335555667778889999998887777777777788899999999999864
No 269
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=26.63 E-value=6.4e+02 Score=24.97 Aligned_cols=116 Identities=9% Similarity=-0.023 Sum_probs=68.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCC--CCCEEEEEcCCcH--
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVN--PGDRCGIYGSNCP-- 113 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~--~gd~Vai~~~n~~-- 113 (508)
...+++.+.++-..+.+-+..+++..+ .|.++ ....+|++.+...+..++..+ ++. +.|++..++|-.-
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~ 151 (386)
T TIGR02372 77 LVRRRIGEWVDLIAHHSTPTARFTFAT--SGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLY 151 (386)
T ss_pred hhhccHHHHHHHHHhcCCCCceEEEEC--CCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHH
Confidence 445667777776666665666666542 22222 234779999988887777654 443 3456777766552
Q ss_pred hHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhH
Q 010535 114 EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (508)
Q Consensus 114 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (508)
.+...++..+.+|+.++.... .++..+...++.. .+++........+
T Consensus 152 g~~~~~l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 152 GFLFSCLLPSRRGLEAKQLAA-APASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHHHHHHCCCeEEecCC-CChHHHHHhhccC--CEEEECcHHHHHH
Confidence 334455667778988876653 4555444444321 4566655555444
No 270
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=26.58 E-value=1.8e+02 Score=25.22 Aligned_cols=50 Identities=8% Similarity=-0.052 Sum_probs=33.9
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCC
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI 127 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~ 127 (508)
..+||.|+.+.+.++|..+.+. +...+.+.+...++-..++..+| ..+|.
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La-~~l~~ 64 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLL-PRLDF 64 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHH-HHcCC
Confidence 4699999999999999999875 22223355556666555555555 33453
No 271
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=26.41 E-value=3.8e+02 Score=23.40 Aligned_cols=40 Identities=13% Similarity=0.064 Sum_probs=28.4
Q ss_pred EEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHH-HHHHH
Q 010535 105 CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANA-VEFII 145 (508)
Q Consensus 105 Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~-l~~~l 145 (508)
+++++.+-=-+++.++|. +.|...|.|||...+.+ +...+
T Consensus 61 ~~liGSSlGG~~A~~La~-~~~~~avLiNPav~p~~~l~~~i 101 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAE-RYGLPAVLINPAVRPYELLQDYI 101 (187)
T ss_pred eEEEEEChHHHHHHHHHH-HhCCCEEEEcCCCCHHHHHHHhh
Confidence 777777666667666664 56899999999987655 44333
No 272
>PRK07867 acyl-CoA synthetase; Validated
Probab=26.17 E-value=4.6e+02 Score=27.12 Aligned_cols=86 Identities=6% Similarity=-0.157 Sum_probs=63.8
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+... .+..+++++...++-.- -.+...++++..|..++.... ..+.+...+++.++..
T Consensus 27 ~~~Ty~el~~~v~~lA~~L~~~-~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 104 (529)
T PRK07867 27 SFTSWREHIRGSAARAAALRAR-LDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQL 104 (529)
T ss_pred cEEeHHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeE
Confidence 3589999999998888877331 13456777776666432 233357788999999887764 7889999999999999
Q ss_pred EEecchHHHH
Q 010535 316 FSGVPRVYDR 325 (508)
Q Consensus 316 ~~~~P~~~~~ 325 (508)
++........
T Consensus 105 li~~~~~~~~ 114 (529)
T PRK07867 105 VLTESAHAEL 114 (529)
T ss_pred EEECHhHHHH
Confidence 9998776553
No 273
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=25.87 E-value=1.4e+02 Score=28.74 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=42.8
Q ss_pred eEeeHHHHHHH------HHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCE
Q 010535 76 VWLTYQEVYDA------AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (508)
Q Consensus 76 ~~~Ty~~l~~~------v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~ 128 (508)
..+.|.++... ...+...+.+.|+.+++.|.+++.+...+..+++++..+|..
T Consensus 237 vnip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 237 KCVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred cccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35677776542 456777788889999999999999999999999999999975
No 274
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=25.83 E-value=3.4e+02 Score=26.36 Aligned_cols=60 Identities=8% Similarity=0.108 Sum_probs=45.4
Q ss_pred HHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 94 L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
|+..++++|++|+|..--..-.+...+|-.. |+.++.++-+ ++.....+..+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 5556899999999999999888888888754 4877777764 3444456677888888754
No 275
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=25.49 E-value=3.7e+02 Score=27.84 Aligned_cols=80 Identities=16% Similarity=0.035 Sum_probs=61.5
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+.. .+..++|++...+|... -.+...++++..|+..+.... ..+.+...++..++.+
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~--~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 124 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLA--KGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKM 124 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeE
Confidence 357999999988888877654 36788999988877553 333457788899998876654 7888889999999998
Q ss_pred EEecc
Q 010535 316 FSGVP 320 (508)
Q Consensus 316 ~~~~P 320 (508)
++...
T Consensus 125 l~~~~ 129 (547)
T PRK06087 125 FFAPT 129 (547)
T ss_pred EEEec
Confidence 88753
No 276
>PRK07470 acyl-CoA synthetase; Validated
Probab=25.26 E-value=7.5e+02 Score=25.35 Aligned_cols=107 Identities=11% Similarity=0.003 Sum_probs=65.9
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEecc
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY 133 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~ 133 (508)
.++.++++..+ .+.++ ....+|.+.+...+......+. .++..+|++...+|-+-.+-...+..+..|+..+.+.
T Consensus 161 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~ 237 (528)
T PRK07470 161 DHDDPCWFFFT--SGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLP 237 (528)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEec
Confidence 34566666542 22222 2346788887543332111111 2567889888888866444333344455666655443
Q ss_pred -CCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 134 -DTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 134 -~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
...+++.+...++..++.+++........+.+
T Consensus 238 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 238 SERFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred ccCcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 45678899999999999999998877766544
No 277
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=25.24 E-value=4.6e+02 Score=27.13 Aligned_cols=86 Identities=10% Similarity=-0.173 Sum_probs=65.0
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+.. .+...++++...++...-+- ...++++..|+..+.... ..+.+...++..++..
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~--~g~~~gd~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDR--DGIKLGDRVATIAWNTWRHL-EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRV 114 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchHHH-HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCE
Confidence 467999999888888877644 26778898888776554332 246677888888877654 7899999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++........+
T Consensus 115 i~~~~~~~~~~ 125 (542)
T PRK06018 115 VITDLTFVPIL 125 (542)
T ss_pred EEEccccHHHH
Confidence 99877665544
No 278
>PRK12582 acyl-CoA synthetase; Provisional
Probab=25.21 E-value=3.3e+02 Score=28.93 Aligned_cols=80 Identities=9% Similarity=-0.029 Sum_probs=60.4
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--C-----HhhHHHHhhh
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--D-----VRYLMEDIQE 310 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~-----~~~~~~~i~~ 310 (508)
-.+|++.+...+..++..+.. .+...+|++...++... --+...++++..|+..+.... . .+.+...++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLD--LGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 478999999998888876633 36788999998888442 333457788888988877653 2 3788999999
Q ss_pred hcCeEEEecc
Q 010535 311 LKPTMFSGVP 320 (508)
Q Consensus 311 ~~~t~~~~~P 320 (508)
.++..++...
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 9999888754
No 279
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=25.18 E-value=6.6e+02 Score=25.35 Aligned_cols=119 Identities=8% Similarity=-0.043 Sum_probs=59.8
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-HhHHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (508)
.++.++++..+ .|.++. ...+|++.+...+..++..+ ++++. ++...+|-. ...+..++.++..|+.++..
T Consensus 118 ~~~~~~~i~~T--SGTTG~PKgV~~t~~~l~~~~~~~~~~~---~~~~~-~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~ 191 (452)
T PRK07445 118 NLETGWIMIPT--GGSSGQIRFAIHTWETLTASVQGFQRYF---QLQQV-NSFCVLPLYHVSGLMQFMRSFLTGGKLVIL 191 (452)
T ss_pred CCCCcEEEEeC--CCCCCCCcEEEechHHHHHHHHHHHHHh---cCCCC-ceEeccCchhhhhHHHHHHHHHcCCeEEEc
Confidence 45677776542 233332 24679888877777666554 44443 344444432 22244566788889988776
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEec
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~ 181 (508)
+..... .........++.++.........+..........++.++...
T Consensus 192 ~~~~~~-~~~~~~~~~~~t~~~~vP~~l~~l~~~~~~~l~~l~~i~~gG 239 (452)
T PRK07445 192 PYKRLK-SGQELPPNPSDFFLSLVPTQLQRLLQLRPQWLAQFRTILLGG 239 (452)
T ss_pred ChHhcc-chhhhhhhcCceEEEehHHHHHHHHhhChhhhhcceEEEECC
Confidence 532111 112222344555555555444444332111223455554443
No 280
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=24.59 E-value=33 Score=16.45 Aligned_cols=9 Identities=44% Similarity=0.944 Sum_probs=6.6
Q ss_pred eccccCCCc
Q 010535 414 GYGLTESCS 422 (508)
Q Consensus 414 ~YG~TE~~~ 422 (508)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 281
>PRK06178 acyl-CoA synthetase; Validated
Probab=24.37 E-value=5.3e+02 Score=26.88 Aligned_cols=86 Identities=10% Similarity=0.023 Sum_probs=65.8
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .+...++++...++...- .+...++++..|+..+.... ....+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~--~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQ--RGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 58999998888888776643 367788888887776643 23456778888888776654 78899999999999999
Q ss_pred EecchHHHHHH
Q 010535 317 SGVPRVYDRIY 327 (508)
Q Consensus 317 ~~~P~~~~~l~ 327 (508)
+..+.....+.
T Consensus 135 i~~~~~~~~l~ 145 (567)
T PRK06178 135 LALDQLAPVVE 145 (567)
T ss_pred EEccchHHHHH
Confidence 99888766553
No 282
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=24.32 E-value=1.8e+02 Score=22.91 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=33.0
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEE
Q 010535 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 130 (508)
Q Consensus 77 ~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v 130 (508)
.++|.++.+.++.+|..|.+.+..... |.-+.. --+..+...+..++....
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~~~-ivgi~~--~G~~~a~~la~~l~~~~~ 54 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDFDV-IVGIPR--GGIPLAAALARALGIPLV 54 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTSSE-EEEETT--TTHHHHHHHHHHHTHEEE
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCCCE-EEeehh--ccHHHHHHHHHHhCCCcc
Confidence 589999999999999999998654333 222222 234455555555555443
No 283
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=24.12 E-value=84 Score=23.09 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=19.1
Q ss_pred EeeHHHHHH-HHHHHHHHHHhCCCCCCCEEEEEcCCc
Q 010535 77 WLTYQEVYD-AAIRFGSAMRSRGVNPGDRCGIYGSNC 112 (508)
Q Consensus 77 ~~Ty~~l~~-~v~~~A~~L~~~gv~~gd~Vai~~~n~ 112 (508)
.++-.|+.+ ++.+++..|.++|++ |-+--.+|
T Consensus 30 slDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 30 SLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp ESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 455678877 999999999999873 44444444
No 284
>PRK13390 acyl-CoA synthetase; Provisional
Probab=24.09 E-value=7.6e+02 Score=25.10 Aligned_cols=82 Identities=4% Similarity=-0.065 Sum_probs=62.0
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|...+...+..++..+.. .+...+|++...++.... .+...++++..|+..+.... .+..+...++..++..
T Consensus 23 ~~lTy~el~~~~~~la~~L~~--~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~ 99 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYD--AGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARV 99 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcE
Confidence 368999999999998887743 367889998888776542 23357778888888776654 7888889999999988
Q ss_pred EEecchH
Q 010535 316 FSGVPRV 322 (508)
Q Consensus 316 ~~~~P~~ 322 (508)
+......
T Consensus 100 ~i~~~~~ 106 (501)
T PRK13390 100 LVASAAL 106 (501)
T ss_pred EEEcchh
Confidence 8776543
No 285
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.90 E-value=5.4e+02 Score=26.63 Aligned_cols=84 Identities=5% Similarity=-0.149 Sum_probs=62.9
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|+..+...+..++..+.. .+...++++...++-..-+ +...++++..|...+.... ....+...+++.++..+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSR--RGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 68899998888887776643 2677888887776654332 3357778888888887654 78899999999999999
Q ss_pred EecchHHHH
Q 010535 317 SGVPRVYDR 325 (508)
Q Consensus 317 ~~~P~~~~~ 325 (508)
+..+.....
T Consensus 119 i~~~~~~~~ 127 (542)
T PRK07786 119 VTEAALAPV 127 (542)
T ss_pred EEccchHHH
Confidence 887765543
No 286
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.90 E-value=4.2e+02 Score=27.60 Aligned_cols=84 Identities=13% Similarity=0.007 Sum_probs=63.1
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .++..++++...++-..-+ +...++++..|+..+.... ....+...++..+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~~--~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQK--LGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 58999998888888777633 2677889888887765432 3457778888887776653 78889999999999999
Q ss_pred EecchHHHH
Q 010535 317 SGVPRVYDR 325 (508)
Q Consensus 317 ~~~P~~~~~ 325 (508)
+..+.....
T Consensus 126 i~~~~~~~~ 134 (563)
T PRK06710 126 LCLDLVFPR 134 (563)
T ss_pred EEeccchhh
Confidence 887755443
No 287
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=23.73 E-value=3.1e+02 Score=20.37 Aligned_cols=66 Identities=8% Similarity=0.112 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCce
Q 010535 84 YDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVS 151 (508)
Q Consensus 84 ~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 151 (508)
++.+..++..+.... +....+.+-..+-++.+.+.--+.+.+..+++++ ..-++.....|...+.+
T Consensus 9 yeTs~~va~~~~~~~-~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~ 74 (92)
T PF04122_consen 9 YETSAKVAKKFYPDN-KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIK 74 (92)
T ss_pred HHHHHHHHHHhcccC-CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCC
Confidence 344555666554432 3344444445555666655555566788888888 44446666777666444
No 288
>PLN02550 threonine dehydratase
Probab=23.51 E-value=9e+02 Score=25.66 Aligned_cols=60 Identities=7% Similarity=-0.087 Sum_probs=43.7
Q ss_pred CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 010535 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 160 (508)
..++| .|+ ...+-....+.++|..+|..+..+=|...+......++..++.++++.....
T Consensus 155 ~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~~d 214 (591)
T PLN02550 155 QLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYD 214 (591)
T ss_pred cCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 34555 344 4455556667788999999888777777767777788999999999986533
No 289
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=22.53 E-value=7.3e+02 Score=25.34 Aligned_cols=68 Identities=13% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHhC-----CCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH
Q 010535 43 ESPWQFFCDSAKRI-----PNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (508)
Q Consensus 43 ~t~~~~l~~~a~~~-----p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~ 117 (508)
..+.+.++++.+++ -+..|+... +. ...+|+++.+.++.++..+.+. ++++..+.+++.+..-=++
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~----g~----~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKvL 423 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALP----GK----PNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKVL 423 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeC----CC----CCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHHH
Confidence 67777777777653 233344332 33 4689999999999999999976 5677778888887755444
Q ss_pred HH
Q 010535 118 AM 119 (508)
Q Consensus 118 ~~ 119 (508)
-+
T Consensus 424 Gq 425 (473)
T PF06277_consen 424 GQ 425 (473)
T ss_pred HH
Confidence 33
No 290
>PRK06382 threonine dehydratase; Provisional
Probab=22.49 E-value=5.2e+02 Score=25.83 Aligned_cols=52 Identities=6% Similarity=-0.128 Sum_probs=39.6
Q ss_pred EcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010535 108 YGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (508)
Q Consensus 108 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (508)
....+-....+.++|..+|..+..+-|...+......++..+++++++....
T Consensus 78 ~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~ 129 (406)
T PRK06382 78 TASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDY 129 (406)
T ss_pred EECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCH
Confidence 3444555566778899999988888777776677778999999999988753
No 291
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=22.26 E-value=6.5e+02 Score=27.05 Aligned_cols=85 Identities=6% Similarity=-0.063 Sum_probs=63.3
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..++..+.. .++..+|++...++-..-. +...++++..|+..+-... .++.+...++..+++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRA--SGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 46899999998888877644 3678899988877765322 2246678888888776543 88999999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+.....+..+
T Consensus 153 ~~~~~~~~~~ 162 (660)
T PLN02430 153 FVQDKKIKEL 162 (660)
T ss_pred EECHHHHHHH
Confidence 9876644433
No 292
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=22.11 E-value=3.7e+02 Score=27.34 Aligned_cols=80 Identities=9% Similarity=-0.014 Sum_probs=59.1
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|+..+...+..++..+... +...++++....+.... .+...++++..|+..+.... ....+...++..++..+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~--g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSL--KLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEE
Confidence 589999999888887776432 55678888877764432 33456778888888776664 77888888999999998
Q ss_pred Eecch
Q 010535 317 SGVPR 321 (508)
Q Consensus 317 ~~~P~ 321 (508)
+....
T Consensus 104 ~~~~~ 108 (503)
T PRK04813 104 IATEE 108 (503)
T ss_pred Eeccc
Confidence 87654
No 293
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=21.81 E-value=6.5e+02 Score=27.66 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=66.4
Q ss_pred eeechHHHHHHHHhhhhhhhhc-cccCCCC-----------cEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhh
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVT-GKVCSEE-----------DTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRY 303 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~ 303 (508)
..+|.+.+...+..++..+... ..++.++ |++...++-.. --+...++++..|+..+-... .++.
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~lA~~~~Gav~Vpl~~~~~~~e 168 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADLACMLSGVTTLVMHSKFSIDV 168 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHH
Confidence 4689999999999988877431 1256665 77877776542 223356778888888776643 8999
Q ss_pred HHHHhhhhcCeEEEecchHHHHHHH
Q 010535 304 LMEDIQELKPTMFSGVPRVYDRIYT 328 (508)
Q Consensus 304 ~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (508)
+...+..-++.+++..+..+..+..
T Consensus 169 l~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 169 IVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred HHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 9999999999999998777776654
No 294
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=21.75 E-value=5.8e+02 Score=26.48 Aligned_cols=86 Identities=9% Similarity=0.021 Sum_probs=64.1
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|+..+...+..++..+.. ..+...++++...+|...- .+...++++..|+..+.... ....+...+.+.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~~-~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLG-ELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 57999988888887765521 1267888998888776532 23357788889999887654 78889999999999999
Q ss_pred EecchHHHHH
Q 010535 317 SGVPRVYDRI 326 (508)
Q Consensus 317 ~~~P~~~~~l 326 (508)
+........+
T Consensus 128 i~~~~~~~~~ 137 (560)
T PRK08751 128 VVIDNFGTTV 137 (560)
T ss_pred EEcchhHHHH
Confidence 9887765543
No 295
>PRK05939 hypothetical protein; Provisional
Probab=21.61 E-value=3.9e+02 Score=26.59 Aligned_cols=11 Identities=18% Similarity=0.081 Sum_probs=5.5
Q ss_pred eeeeccccCCC
Q 010535 411 LTQGYGLTESC 421 (508)
Q Consensus 411 l~~~YG~TE~~ 421 (508)
.-..+|..|+-
T Consensus 337 ~~~s~G~~~sl 347 (397)
T PRK05939 337 KATHLGDTRTL 347 (397)
T ss_pred EccCCCCCCee
Confidence 44445555543
No 296
>PRK07868 acyl-CoA synthetase; Validated
Probab=21.43 E-value=8e+02 Score=28.03 Aligned_cols=104 Identities=8% Similarity=-0.019 Sum_probs=61.4
Q ss_pred CCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH--HHHHHHHHhcCCEEEeccC
Q 010535 57 PNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQAITYVPLYD 134 (508)
Q Consensus 57 p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~--~~~~lA~~~~G~~~v~l~~ 134 (508)
++.+|++..+ +.+..+..+.+|.......+.. .....++.++|++...+|=+-.+ ...+++++ .|+..+.+.+
T Consensus 605 ~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~---~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l-~gG~~vvl~~ 679 (994)
T PRK07868 605 ARDLAFIAFS-TAGGELVAKQITNYRWALSAFG---TASAAALDRRDTVYCLTPLHHESGLLVSLGGAV-VGGSRIALSR 679 (994)
T ss_pred CCccEEEEEe-CCCCCcCcEEEehHHHHHHHHh---hhhhcCCCCCCeEEEecChHHHhHHHHHHHHHh-ccceEEEecC
Confidence 4667776652 1122233345664332211111 11234778899988887755332 22334444 4444455566
Q ss_pred CCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 135 TLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 135 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
..+++.+...+++.++.++.........+.+
T Consensus 680 ~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 680 GLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 7899999999999999999887766665544
No 297
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=21.30 E-value=7.2e+02 Score=24.82 Aligned_cols=62 Identities=8% Similarity=-0.000 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcCCcHhHHH----HHH-----HHHhcCCEEEeccC---CCCHHHHHHHHHhcCceEEEEcCCCh
Q 010535 99 VNPGDRCGIYGSNCPEWII----AME-----ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKI 160 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~----~~l-----A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~ 160 (508)
+++||+|..+....-.++- .-. .......+..++++ ....++++.+++..+|++|++.....
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y 180 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSY 180 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SST
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhc
Confidence 4678887777655422211 011 22223344556663 45688999999999999999988644
No 298
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.72 E-value=7.9e+02 Score=25.35 Aligned_cols=97 Identities=10% Similarity=-0.055 Sum_probs=61.8
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCC-CEEEEEcCCc--HhHHHHHHHHHhcCCEEE
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPG-DRCGIYGSNC--PEWIIAMEACNSQAITYV 130 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~g-d~Vai~~~n~--~~~~~~~lA~~~~G~~~v 130 (508)
.++.++++..+ .+.++ ....+|.+.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+
T Consensus 150 ~~~~~a~i~~T--SGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 224 (545)
T PRK07768 150 GEDDLALMQLT--SGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELV 224 (545)
T ss_pred CCCCEEEEEeC--CCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEE
Confidence 45677776552 22222 2357888888765554433 3466666 7877776654 344445667788899888
Q ss_pred eccCCC---CHHHHHHHHHhcCceEEEEcC
Q 010535 131 PLYDTL---GANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 131 ~l~~~~---~~~~l~~~l~~~~~~~vi~~~ 157 (508)
.+.+.. .+..+..++++.++.++.+..
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 254 (545)
T PRK07768 225 KVTPMDFLRDPLLWAELISKYRGTMTAAPN 254 (545)
T ss_pred EeCHHHHHHhHHHHHHHHHHhCCEEEECch
Confidence 776532 566777889999998865543
No 299
>PRK09192 acyl-CoA synthetase; Validated
Probab=20.59 E-value=7.6e+02 Score=25.82 Aligned_cols=87 Identities=9% Similarity=-0.094 Sum_probs=64.6
Q ss_pred eeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC---------CHhhHHHH
Q 010535 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---------DVRYLMED 307 (508)
Q Consensus 237 ~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~---------~~~~~~~~ 307 (508)
.-.+|...+...+..++..+.. .++.+++++...++..- ..+...++++..|+..+.... ..+.+...
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~--~gi~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~ 123 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLA--LGLKPGDRVALIAETDG-DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM 123 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCch-hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHH
Confidence 3568999998888888776643 36788999988887643 333457788889998887742 15788999
Q ss_pred hhhhcCeEEEecchHHHHH
Q 010535 308 IQELKPTMFSGVPRVYDRI 326 (508)
Q Consensus 308 i~~~~~t~~~~~P~~~~~l 326 (508)
++..++..++........+
T Consensus 124 i~~~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 124 LASAQPAAIITPDELLPWV 142 (579)
T ss_pred HHhcCCCEEEeChHHHHHH
Confidence 9999999999877655444
No 300
>PRK06060 acyl-CoA synthetase; Validated
Probab=20.41 E-value=6e+02 Score=27.51 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=61.6
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|+..+...+..++..+.. .+...++++...++-..-+ +..+++++..|+..+.... ....+...++..++.++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~--~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRN--RGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEE
Confidence 48999999988888877644 3678899998887765422 2356778888887776654 67888888889999988
Q ss_pred EecchHHH
Q 010535 317 SGVPRVYD 324 (508)
Q Consensus 317 ~~~P~~~~ 324 (508)
+.......
T Consensus 107 i~~~~~~~ 114 (705)
T PRK06060 107 VTSDALRD 114 (705)
T ss_pred EEchHHhh
Confidence 87655433
No 301
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=20.40 E-value=4.2e+02 Score=24.91 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=36.2
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccC----------CCCHHHHHHHHHh-cCceEEEEc
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----------TLGANAVEFIINH-AEVSIAFVQ 156 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~vi~~ 156 (508)
+++||.|.+.-+.... .+-++...|+.++.+.+ ..+.+.+...++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789988877654433 34455668887776654 3467888888865 456765554
No 302
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=20.29 E-value=5.1e+02 Score=26.81 Aligned_cols=79 Identities=9% Similarity=0.038 Sum_probs=60.2
Q ss_pred eechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEE
Q 010535 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (508)
Q Consensus 239 ~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~ 316 (508)
.+|...+...+..+...+.. .++.+++++...++-.. -.+...++++..|+..+.... ....+...++..++..+
T Consensus 46 ~~ty~el~~~~~~~a~~L~~--~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLR--AGYGKDASVALYLGNTP-DHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCh-HHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 58999998888888776633 36788999988887543 223356678888888876654 78899999999999999
Q ss_pred Eecc
Q 010535 317 SGVP 320 (508)
Q Consensus 317 ~~~P 320 (508)
+...
T Consensus 123 i~~~ 126 (541)
T TIGR03205 123 ITSD 126 (541)
T ss_pred EEeC
Confidence 8754
No 303
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=20.21 E-value=3.6e+02 Score=25.82 Aligned_cols=57 Identities=11% Similarity=-0.143 Sum_probs=40.3
Q ss_pred CCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010535 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (508)
Q Consensus 102 gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (508)
++.|... ..+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~ 126 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNF 126 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcH
Confidence 4454444 34444455568899999988777666666777788899999999998753
Done!