Query 010535
Match_columns 508
No_of_seqs 180 out of 2031
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 08:54:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g7s_A Long-chain-fatty-acid-- 100.0 7E-61 2.4E-65 497.8 42.2 402 38-508 14-431 (549)
2 3ni2_A 4-coumarate:COA ligase; 100.0 2.1E-61 7.1E-66 500.3 34.2 416 20-508 3-426 (536)
3 1v25_A Long-chain-fatty-acid-C 100.0 6.1E-60 2.1E-64 489.6 42.4 396 42-508 17-427 (541)
4 3rix_A Luciferase, luciferin 4 100.0 1.1E-60 3.7E-65 496.5 36.4 409 36-508 13-431 (550)
5 3o83_A Peptide arylation enzym 100.0 3.5E-60 1.2E-64 491.7 39.2 393 42-508 29-431 (544)
6 3etc_A AMP-binding protein; ad 100.0 3.6E-60 1.2E-64 494.2 37.9 400 39-508 52-467 (580)
7 3r44_A Fatty acyl COA syntheta 100.0 1.7E-60 5.8E-65 491.0 34.4 391 40-508 13-405 (517)
8 1mdb_A 2,3-dihydroxybenzoate-A 100.0 4.2E-60 1.4E-64 490.6 34.7 390 42-508 24-422 (539)
9 2d1s_A Luciferase, luciferin 4 100.0 3.6E-59 1.2E-63 484.3 36.5 414 22-508 8-433 (548)
10 3ivr_A Putative long-chain-fat 100.0 7E-59 2.4E-63 478.7 38.1 385 40-508 3-390 (509)
11 3c5e_A Acyl-coenzyme A synthet 100.0 1.1E-58 3.9E-63 482.2 39.0 397 40-508 35-448 (570)
12 3t5a_A Long-chain-fatty-acid-- 100.0 1.2E-59 4E-64 481.6 29.6 394 41-508 22-474 (480)
13 1t5h_X 4-chlorobenzoyl COA lig 100.0 2.2E-58 7.5E-63 474.2 37.0 381 42-508 1-394 (504)
14 1pg4_A Acetyl-COA synthetase; 100.0 9.2E-59 3.1E-63 490.2 34.8 409 42-508 75-509 (652)
15 4gr5_A Non-ribosomal peptide s 100.0 9.3E-59 3.2E-63 483.7 34.3 374 40-508 72-461 (570)
16 4fuq_A Malonyl COA synthetase; 100.0 6.6E-59 2.3E-63 477.5 31.4 385 47-508 4-391 (503)
17 2v7b_A Benzoate-coenzyme A lig 100.0 3.8E-58 1.3E-62 475.5 35.1 396 40-508 21-421 (529)
18 1ry2_A Acetyl-coenzyme A synth 100.0 2.2E-58 7.4E-63 487.5 33.8 410 42-508 81-518 (663)
19 3rg2_A Enterobactin synthase c 100.0 1.4E-57 4.8E-62 479.0 37.4 393 41-508 25-426 (617)
20 4dg8_A PA1221; ANL superfamily 100.0 1.3E-57 4.3E-62 477.6 35.9 372 41-508 25-411 (620)
21 1amu_A GRSA, gramicidin synthe 100.0 5.5E-57 1.9E-61 468.8 34.7 373 41-508 37-422 (563)
22 3l8c_A D-alanine--poly(phospho 100.0 2.2E-57 7.6E-62 469.1 31.3 377 42-508 3-395 (521)
23 3tsy_A Fusion protein 4-coumar 100.0 3.5E-57 1.2E-61 500.0 34.8 420 21-508 43-473 (979)
24 3fce_A D-alanine--poly(phospho 100.0 8E-58 2.7E-62 471.1 27.6 376 43-508 1-391 (512)
25 3e7w_A D-alanine--poly(phospho 100.0 4.2E-57 1.5E-61 465.4 32.1 375 43-508 1-390 (511)
26 3ite_A SIDN siderophore synthe 100.0 6.9E-56 2.3E-60 462.0 37.3 392 40-508 17-419 (562)
27 3kxw_A Saframycin MX1 syntheta 100.0 7.1E-57 2.4E-61 472.7 29.5 392 40-508 8-450 (590)
28 3ipl_A 2-succinylbenzoate--COA 100.0 2.2E-56 7.7E-61 459.3 30.3 385 44-508 2-390 (501)
29 3gqw_A Fatty acid AMP ligase; 100.0 5.9E-56 2E-60 464.6 33.8 397 33-508 11-453 (576)
30 3nyq_A Malonyl-COA ligase; A/B 100.0 8.7E-57 3E-61 461.8 26.9 374 40-508 19-397 (505)
31 2vsq_A Surfactin synthetase su 100.0 2.5E-53 8.6E-58 480.6 36.8 376 42-508 463-853 (1304)
32 4gs5_A Acyl-COA synthetase (AM 100.0 2.8E-34 9.6E-39 280.7 13.7 207 220-508 37-243 (358)
33 3qov_A Phenylacetate-coenzyme 100.0 5E-32 1.7E-36 273.0 21.1 230 216-507 81-313 (436)
34 2y27_A Phenylacetate-coenzyme 100.0 1.6E-31 5.3E-36 269.5 24.0 231 216-508 86-320 (437)
35 2y4o_A Phenylacetate-coenzyme 100.0 2.2E-31 7.4E-36 268.9 22.8 246 199-508 73-322 (443)
36 3hgu_A EHPF; phenazine, antibi 100.0 6.1E-29 2.1E-33 244.8 18.9 227 217-499 88-350 (369)
37 4eql_A 4-substituted benzoates 96.8 0.012 4.1E-07 59.7 12.8 31 218-248 91-122 (581)
38 4b2g_A GH3-1 auxin conjugating 96.3 0.071 2.4E-06 54.2 14.7 31 218-248 97-128 (609)
39 4epl_A Jasmonic acid-amido syn 95.3 0.08 2.7E-06 53.5 10.4 30 218-247 96-126 (581)
40 2y27_A Phenylacetate-coenzyme 92.2 1.1 3.8E-05 43.9 11.9 125 56-183 88-221 (437)
41 3qov_A Phenylacetate-coenzyme 91.8 0.93 3.2E-05 44.4 10.8 124 58-184 86-218 (436)
42 2y4o_A Phenylacetate-coenzyme 91.4 1.3 4.4E-05 43.5 11.4 125 56-183 90-223 (443)
43 3ipl_A 2-succinylbenzoate--COA 86.6 10 0.00035 37.6 14.1 122 56-183 161-285 (501)
44 3hgu_A EHPF; phenazine, antibi 80.4 6.7 0.00023 37.1 9.3 104 56-163 89-219 (369)
45 1mdb_A 2,3-dihydroxybenzoate-A 79.8 30 0.001 34.6 14.4 122 56-183 180-309 (539)
46 2d1s_A Luciferase, luciferin 4 78.8 16 0.00055 36.7 12.0 122 58-183 192-320 (548)
47 4gr5_A Non-ribosomal peptide s 71.8 19 0.00065 36.4 10.4 123 56-184 212-338 (570)
48 4dg8_A PA1221; ANL superfamily 70.4 24 0.00082 36.1 10.8 124 56-185 162-289 (620)
49 3o83_A Peptide arylation enzym 70.3 30 0.001 34.7 11.4 122 56-183 189-318 (544)
50 3rix_A Luciferase, luciferin 4 68.7 31 0.0011 34.6 11.1 124 57-183 189-318 (550)
51 3g7s_A Long-chain-fatty-acid-- 68.4 62 0.0021 32.3 13.3 106 219-328 33-140 (549)
52 3fce_A D-alanine--poly(phospho 67.5 32 0.0011 34.0 10.9 123 56-183 142-272 (512)
53 3kxw_A Saframycin MX1 syntheta 67.4 38 0.0013 34.2 11.6 123 56-183 165-300 (590)
54 3ivr_A Putative long-chain-fat 67.3 53 0.0018 32.4 12.5 98 219-328 20-119 (509)
55 3r44_A Fatty acyl COA syntheta 67.0 31 0.0011 34.3 10.6 121 56-183 168-295 (517)
56 1v25_A Long-chain-fatty-acid-C 66.6 60 0.0021 32.3 12.8 100 219-326 32-133 (541)
57 3ni2_A 4-coumarate:COA ligase; 66.5 59 0.002 32.3 12.7 101 218-328 35-137 (536)
58 3rg2_A Enterobactin synthase c 66.4 70 0.0024 32.5 13.4 123 56-184 182-314 (617)
59 3e7w_A D-alanine--poly(phospho 65.8 49 0.0017 32.7 11.8 123 56-183 141-271 (511)
60 3c5e_A Acyl-coenzyme A synthet 64.2 66 0.0023 32.3 12.6 124 56-184 204-334 (570)
61 1amu_A GRSA, gramicidin synthe 59.6 95 0.0033 31.1 12.8 85 238-325 63-149 (563)
62 1t5h_X 4-chlorobenzoyl COA lig 59.3 91 0.0031 30.6 12.4 98 219-326 16-117 (504)
63 3t5a_A Long-chain-fatty-acid-- 59.0 1.2E+02 0.004 29.4 13.1 107 218-328 37-148 (480)
64 3tbh_A O-acetyl serine sulfhyd 57.2 50 0.0017 30.7 9.4 65 94-158 62-127 (334)
65 4gs5_A Acyl-COA synthetase (AM 57.2 35 0.0012 32.0 8.4 121 54-182 33-158 (358)
66 1ry2_A Acetyl-coenzyme A synth 56.8 94 0.0032 31.9 12.3 99 218-322 95-196 (663)
67 3vc3_A Beta-cyanoalnine syntha 53.2 63 0.0022 30.1 9.4 70 89-158 73-142 (344)
68 2v7b_A Benzoate-coenzyme A lig 51.7 74 0.0025 31.5 10.3 87 238-327 47-135 (529)
69 4fuq_A Malonyl COA synthetase; 51.4 75 0.0026 31.2 10.3 86 238-326 27-114 (503)
70 3etc_A AMP-binding protein; ad 49.7 1.1E+02 0.0037 30.8 11.3 98 218-322 69-168 (580)
71 1pg4_A Acetyl-COA synthetase; 49.6 1.3E+02 0.0045 30.7 12.0 98 219-322 90-189 (652)
72 3nyq_A Malonyl-COA ligase; A/B 48.3 1E+02 0.0034 30.4 10.6 103 56-165 153-259 (505)
73 3tsy_A Fusion protein 4-coumar 46.9 1.1E+02 0.0036 33.3 11.3 99 218-326 74-174 (979)
74 3ist_A Glutamate racemase; str 44.0 68 0.0023 28.7 7.6 63 47-116 19-81 (269)
75 2vsq_A Surfactin synthetase su 39.8 68 0.0023 36.2 8.6 123 56-184 605-732 (1304)
76 3ite_A SIDN siderophore synthe 38.0 1.4E+02 0.0048 29.7 9.9 107 76-183 193-305 (562)
77 4eez_A Alcohol dehydrogenase 1 37.6 90 0.0031 28.8 7.9 76 78-156 137-215 (348)
78 2q3b_A Cysteine synthase A; py 37.4 1.7E+02 0.0059 26.5 9.7 64 94-158 58-122 (313)
79 3gqw_A Fatty acid AMP ligase; 36.7 2.2E+02 0.0074 28.3 11.1 87 238-327 48-143 (576)
80 3ju7_A Putative PLP-dependent 35.9 96 0.0033 29.1 7.8 60 93-155 69-135 (377)
81 3l8c_A D-alanine--poly(phospho 35.0 1.2E+02 0.0041 29.8 8.8 81 238-321 28-110 (521)
82 2egu_A Cysteine synthase; O-ac 33.6 2E+02 0.0067 26.1 9.3 63 95-158 57-120 (308)
83 1ve1_A O-acetylserine sulfhydr 31.9 2.8E+02 0.0095 24.9 10.0 63 95-158 52-117 (304)
84 2v03_A Cysteine synthase B; py 31.5 2.8E+02 0.0095 24.9 10.0 63 95-158 53-116 (303)
85 3uhf_A Glutamate racemase; str 31.3 1.1E+02 0.0037 27.4 6.9 62 48-116 39-100 (274)
86 4aec_A Cysteine synthase, mito 31.0 2.2E+02 0.0076 27.3 9.4 63 95-157 166-229 (430)
87 3out_A Glutamate racemase; str 30.5 1.8E+02 0.006 25.9 8.1 62 48-116 22-83 (268)
88 1z7w_A Cysteine synthase; tran 30.2 2.6E+02 0.0088 25.4 9.6 64 95-158 58-122 (322)
89 2gzm_A Glutamate racemase; enz 29.2 2E+02 0.007 25.4 8.4 62 47-115 17-78 (267)
90 4h1h_A LMO1638 protein; MCCF-l 28.4 1.2E+02 0.0041 27.9 6.8 61 98-158 8-87 (327)
91 3tqh_A Quinone oxidoreductase; 28.3 2E+02 0.0069 26.0 8.5 74 78-156 126-203 (321)
92 3dwg_A Cysteine synthase B; su 27.2 3E+02 0.01 25.1 9.4 63 95-158 65-128 (325)
93 1o69_A Aminotransferase; struc 26.8 2.4E+02 0.0083 26.2 9.1 61 94-157 64-130 (394)
94 1eg5_A Aminotransferase; PLP-d 26.6 2.1E+02 0.0071 26.3 8.5 55 100-155 87-145 (384)
95 2pqm_A Cysteine synthase; OASS 26.4 3.5E+02 0.012 24.8 9.8 59 99-158 75-133 (343)
96 3goh_A Alcohol dehydrogenase, 26.1 1.8E+02 0.0062 26.2 7.8 73 77-154 115-190 (315)
97 3ri6_A O-acetylhomoserine sulf 26.0 2.4E+02 0.0083 26.9 8.9 62 106-167 100-164 (430)
98 1zuw_A Glutamate racemase 1; ( 25.9 2.4E+02 0.008 25.1 8.2 62 47-115 17-79 (272)
99 1h2b_A Alcohol dehydrogenase; 25.8 2.4E+02 0.0083 26.0 8.7 62 93-157 176-239 (359)
100 2e7j_A SEP-tRNA:Cys-tRNA synth 25.8 3.2E+02 0.011 24.8 9.7 56 99-157 90-155 (371)
101 3ijw_A Aminoglycoside N3-acety 25.4 45 0.0015 29.8 3.1 25 88-112 18-42 (268)
102 3a2b_A Serine palmitoyltransfe 25.1 3.8E+02 0.013 24.7 10.2 55 99-157 124-181 (398)
103 3s2e_A Zinc-containing alcohol 24.9 2.4E+02 0.008 25.8 8.4 76 78-157 140-218 (340)
104 3dzz_A Putative pyridoxal 5'-p 24.8 2.2E+02 0.0075 26.3 8.3 55 99-156 106-167 (391)
105 3two_A Mannitol dehydrogenase; 24.7 2.2E+02 0.0075 26.2 8.1 73 78-154 150-225 (348)
106 1zsy_A Mitochondrial 2-enoyl t 24.4 3.2E+02 0.011 25.1 9.3 78 78-156 140-223 (357)
107 3jv7_A ADH-A; dehydrogenase, n 24.2 2.4E+02 0.0081 25.9 8.3 78 78-158 143-225 (345)
108 2nyg_A YOKD protein; PFAM02522 23.8 50 0.0017 29.6 3.1 24 89-112 17-40 (273)
109 3sma_A FRBF; N-acetyl transfer 23.8 50 0.0017 29.8 3.1 30 76-112 20-49 (286)
110 2jfq_A Glutamate racemase; cel 23.2 2.9E+02 0.01 24.6 8.3 62 47-115 36-97 (286)
111 2jtq_A Phage shock protein E; 22.7 1.7E+02 0.0058 20.1 5.4 46 76-128 22-67 (85)
112 2vvt_A Glutamate racemase; iso 22.6 3.1E+02 0.011 24.5 8.4 64 46-116 37-100 (290)
113 3sr3_A Microcin immunity prote 22.5 2.1E+02 0.007 26.5 7.2 61 98-158 9-88 (336)
114 3pc3_A CG1753, isoform A; CBS, 22.1 4.3E+02 0.015 26.0 10.1 61 96-157 106-167 (527)
115 3tla_A MCCF; serine protease, 21.8 1.7E+02 0.0057 27.6 6.5 61 98-158 39-118 (371)
116 3isl_A Purine catabolism prote 21.6 3.4E+02 0.011 25.2 9.0 58 99-157 83-144 (416)
117 1mdo_A ARNB aminotransferase; 21.6 2.2E+02 0.0074 26.4 7.6 55 97-155 74-133 (393)
118 2jfz_A Glutamate racemase; cel 21.5 1.7E+02 0.0059 25.6 6.3 60 48-114 15-74 (255)
119 4e5s_A MCCFLIKE protein (BA_56 20.9 2E+02 0.007 26.4 6.8 61 98-158 8-87 (331)
120 1ofu_X SULA, hypothetical prot 20.8 2.8E+02 0.0096 21.0 7.2 54 90-143 46-101 (119)
121 3krt_A Crotonyl COA reductase; 20.6 3.2E+02 0.011 26.3 8.7 75 78-156 199-280 (456)
122 3b8x_A WBDK, pyridoxamine 5-ph 20.6 3.4E+02 0.012 25.1 8.7 55 98-156 76-135 (390)
123 1y7l_A O-acetylserine sulfhydr 20.4 4.3E+02 0.015 23.8 9.1 64 94-158 53-117 (316)
124 2ch1_A 3-hydroxykynurenine tra 20.3 3.8E+02 0.013 24.6 9.0 57 99-156 90-150 (396)
125 3l6b_A Serine racemase; pyrido 20.3 1.8E+02 0.0063 26.9 6.5 50 110-159 83-132 (346)
No 1
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=7e-61 Score=497.77 Aligned_cols=402 Identities=22% Similarity=0.288 Sum_probs=337.9
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCC--CCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH
Q 010535 38 SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGK--VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 38 ~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~--~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~ 115 (508)
.+....++.++|+++++++|+++|+++. ++. .+.++.+||+||.++++++|.+|.+.|+++||+|+++++|++++
T Consensus 14 ~~~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~ 90 (549)
T 3g7s_A 14 LYYPKISLADRIDAAAEKFGEKTAIISA---EPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDY 90 (549)
T ss_dssp CCCCCCCTTHHHHHHHHHHTTSEEEEEE---SSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH
T ss_pred CCcCCCCHHHHHHHHHHhCCCceEEEeC---CCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 3445689999999999999999999987 521 23446899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcC
Q 010535 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 116 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
+++++||+++|++++||+|.++.+++.++++.++++++|++......+....... ....++..+..
T Consensus 91 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~------------ 156 (549)
T 3g7s_A 91 VMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKT--GVERVFVVGGE------------ 156 (549)
T ss_dssp HHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTS--CCCEEEEETCS------------
T ss_pred HHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhC--CCcEEEEeCCC------------
Confidence 9999999999999999999999999999999999999999988776665544322 24455554422
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCC-CCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecC
Q 010535 196 VSCFSWEEFLQLGTLDCELPPKKK-TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 274 (508)
...++++..............+ +++++|+|||||||.||||+++|+++...+......+ .+..+|++++.+|
T Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~~~~p 229 (549)
T 3g7s_A 157 --VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVAT-----GLSHMDTIVGCMP 229 (549)
T ss_dssp --SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHH-----CCCTTCEEECCSC
T ss_pred --CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHc-----CCCCCCEEEEeCc
Confidence 2356666655432223333334 8999999999999999999999999999998887776 7889999999999
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 275 LAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 275 l~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
++|.+++...+.++..|+++++.+. ++..+++.++++++|+++++|+++..|++........
T Consensus 230 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~----------------- 292 (549)
T 3g7s_A 230 MFHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKT----------------- 292 (549)
T ss_dssp TTSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCC-----------------
T ss_pred HHHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhccc-----------------
Confidence 9999998888889999999999874 9999999999999999999999999987643322100
Q ss_pred hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHh----cC---CceeeeccccCCCcceee
Q 010535 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----SG---APLTQGYGLTESCSGCFT 426 (508)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~----~~---~~l~~~YG~TE~~~~~~~ 426 (508)
.++ +++|.+++||+++++++.+++.+. ++ +.+++.||+||++.+++.
T Consensus 293 ------------------~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~ 346 (549)
T 3g7s_A 293 ------------------YDW--------SYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTT 346 (549)
T ss_dssp ------------------CCC--------TTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEE
T ss_pred ------------------CCc--------cceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccchhhhc
Confidence 011 389999999999999999999887 56 899999999999988877
Q ss_pred ccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc---cCC--ccccCcEE
Q 010535 427 SLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI---VDG--WFHTGDIG 501 (508)
Q Consensus 427 ~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~---~~g--w~~TGDlg 501 (508)
.........+++|+|+++++++|+|.+++..++. |+.|||+|+|++++.||+++++.+.+.| .+| ||+|||+|
T Consensus 347 ~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~--g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~ 424 (549)
T 3g7s_A 347 NPPLRLDKSTTQGVPMSDIELKVISLEDGRELGV--GESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVG 424 (549)
T ss_dssp CCGGGGGGTTSCCEECTTCEEEEECSSSCCEECT--TCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEE
T ss_pred CCccccCcCCCccccCCCCEEEEEeCCCCcCCCC--CCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEE
Confidence 6655545558999999999999999566665554 4899999999999999999999999998 677 99999999
Q ss_pred EEcCCCC
Q 010535 502 EWQPMEL 508 (508)
Q Consensus 502 ~~d~~G~ 508 (508)
++|+||+
T Consensus 425 ~~~~dG~ 431 (549)
T 3g7s_A 425 FIDEEGF 431 (549)
T ss_dssp EECTTSC
T ss_pred EEcCCce
Confidence 9999995
No 2
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=2.1e-61 Score=500.25 Aligned_cols=416 Identities=22% Similarity=0.301 Sum_probs=337.0
Q ss_pred CCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCC
Q 010535 20 PSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV 99 (508)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv 99 (508)
|....+|++......++ ...++.++|.++++++|+++|+++. ++. +.+||+||.++++++|++|.+.|+
T Consensus 3 ~~~~~i~~~~~~~~~~p----~~~~l~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv 71 (536)
T 3ni2_A 3 PQEEFIFRSKLPDIYIP----KNLPLHSYVLENLSNHSSKPCLING---ANG----DVYTYADVELTARRVASGLNKIGI 71 (536)
T ss_dssp --CCCCBCCSSCCCCCC----SSCCHHHHHTTTGGGSTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred cccceEEecCCCCCCCC----CCCcHHHHHHHHhhcCCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHHHcCC
Confidence 34556787777654444 2478999999999999999999875 322 579999999999999999999999
Q ss_pred CCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEE
Q 010535 100 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVS 179 (508)
Q Consensus 100 ~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~ 179 (508)
++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++|++......+.+..... .. .++.
T Consensus 72 ~~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~ 148 (536)
T 3ni2_A 72 QQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARES--DV-KVMC 148 (536)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHH--TC-EEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhc--Cc-eEEE
Confidence 99999999999999999999999999999999999999999999999999999999987666554433211 11 3344
Q ss_pred ecCCChhhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhc
Q 010535 180 FANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVT 259 (508)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~ 259 (508)
++... .....++++..............++++++|+|||||||.||||.++|+++...+........ .
T Consensus 149 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~-~ 216 (536)
T 3ni2_A 149 VDSAP-----------DGCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDN-P 216 (536)
T ss_dssp SSCCC-----------TTCEETHHHHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSS-C
T ss_pred ecCCC-----------CCccCHHHHhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhcc-c
Confidence 43221 12345666655443333344567899999999999999999999999999988766433210 0
Q ss_pred cccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcC
Q 010535 260 GKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 337 (508)
Q Consensus 260 ~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 337 (508)
...+..++++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..+++.
T Consensus 217 ~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------- 288 (536)
T 3ni2_A 217 NLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKS-------- 288 (536)
T ss_dssp SSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTC--------
T ss_pred cccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhC--------
Confidence 125678999999999999999964 7789999999999874 999999999999999999999999988641
Q ss_pred ChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeecc
Q 010535 338 GALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYG 416 (508)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 416 (508)
+..+..++ ++||.+++||+++++++.+++++.+ +..+++.||
T Consensus 289 -----------------------------~~~~~~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG 331 (536)
T 3ni2_A 289 -----------------------------PDLDKHDL--------SSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYG 331 (536)
T ss_dssp -----------------------------SCGGGSCC--------TTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEE
T ss_pred -----------------------------cccccCCC--------ccceEEEECCCCCCHHHHHHHHHHCCCCCcccccc
Confidence 11111122 3899999999999999999999988 899999999
Q ss_pred ccCCCcceeecc----CCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-c
Q 010535 417 LTESCSGCFTSL----ADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V 491 (508)
Q Consensus 417 ~TE~~~~~~~~~----~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~ 491 (508)
+||++.+++... .......+++|+|+++++++|+|.+++..++ .|+.|||+|+|++++.||+++|+.+.+.| .
T Consensus 332 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~ 409 (536)
T 3ni2_A 332 MTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLP--RNQPGEICIRGDQIMKGYLNDPEATSRTIDK 409 (536)
T ss_dssp CGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCC--TTCCEEEEEESTTSCSEETTCHHHHHHHBCT
T ss_pred ccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCC--CCCccEEEEeCcccchhhcCChhHHHhhccC
Confidence 999997765532 1123345899999999999999944455554 45999999999999999999999999999 7
Q ss_pred CCccccCcEEEEcCCCC
Q 010535 492 DGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 492 ~gw~~TGDlg~~d~~G~ 508 (508)
+|||+|||+|++|+||+
T Consensus 410 ~g~~~TGDl~~~~~dG~ 426 (536)
T 3ni2_A 410 EGWLHTGDIGYIDDDDE 426 (536)
T ss_dssp TSCEEEEEEEEECTTSC
T ss_pred CCceEcccEEEEcCCce
Confidence 89999999999999995
No 3
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=6.1e-60 Score=489.55 Aligned_cols=396 Identities=23% Similarity=0.327 Sum_probs=327.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|+++++++|+++|+++. ++ +..+.+||+||.++++++|.+|+++|+++||+|+++++|+++++++++|
T Consensus 17 ~~~l~~~l~~~a~~~p~~~a~~~~---~~--~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 91 (541)
T 1v25_A 17 ELNLWDFLERAAALFGRKEVVSRL---HT--GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFA 91 (541)
T ss_dssp CCCTHHHHHHHHHHSTTCEEEEEC---TT--SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCceEEEEe---cC--CCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 468999999999999999999864 22 2237899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|++|.++.+++.++++.++++++|++......+..... ....++.++.++.... .....+
T Consensus 92 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~ 160 (541)
T 1v25_A 92 VPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRG-ELKTVQHFVVMDEKAP----------EGYLAY 160 (541)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGG-GCSSCCEEEESSSCCC----------TTCEEH
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHh-hCCCccEEEEecCCCC----------cccccH
Confidence 99999999999999999999999999999999999876655544332 2234555665543321 013356
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhh--hhhhhhccccCCCCcEEEEecChHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV--DQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
+++...... .....++++++|+|||||||.||||.++|+++....... ...+ .+..+|++++.+|++|.+
T Consensus 161 ~~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~ 232 (541)
T 1v25_A 161 EEALGEEAD---PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGT-----ALSEKDVVLPVVPMFHVN 232 (541)
T ss_dssp HHHCCSCCC---CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTT-----CCCTTCEEEECSCTTSHH
T ss_pred HHHhhccCC---cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccc-----cCCCCCEEEEeccchhhh
Confidence 655433211 134467899999999999999999999999998776552 2222 677899999999999999
Q ss_pred HHHHHHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 280 DQIIETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
++...+.+++.|+++++.+ +++..+++.++++++|+++++|+++..|++.......
T Consensus 233 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~---------------------- 290 (541)
T 1v25_A 233 AWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGH---------------------- 290 (541)
T ss_dssp HHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTC----------------------
T ss_pred HHHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCC----------------------
Confidence 9877788999999999986 3899999999999999999999999998764322110
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC------
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV------ 431 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~------ 431 (508)
++ ++||.+++||+++++++.+++ +.+|+.+++.||+||++.+++......
T Consensus 291 ---------------~l--------~~lr~i~~gG~~l~~~~~~~~-~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~ 346 (541)
T 1v25_A 291 ---------------RL--------KTLRRLVVGGSAAPRSLIARF-ERMGVEVRQGYGLTETSPVVVQNFVKSHLESLS 346 (541)
T ss_dssp ---------------CC--------SSCCEEEECSSCCCHHHHHHH-HHTTCEEEEEEECGGGSSEEEECCCCGGGTTSC
T ss_pred ---------------cc--------hhccEEEECCCCCCHHHHHHH-HHhCCceeecccccccccceecccccccccccC
Confidence 01 389999999999999999999 567999999999999998776654321
Q ss_pred ----cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-CCccccCcEEEEcCC
Q 010535 432 ----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-DGWFHTGDIGEWQPM 506 (508)
Q Consensus 432 ----~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-~gw~~TGDlg~~d~~ 506 (508)
....+++|+|+|+++++|+| +++..++.+.++.|||+|+||.++.||+++|+.+.+.|. +|||+|||+|++|+|
T Consensus 347 ~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~d 425 (541)
T 1v25_A 347 EEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEE 425 (541)
T ss_dssp HHHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTT
T ss_pred ccccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCC
Confidence 12347899999999999999 888877654457899999999999999999999999995 999999999999999
Q ss_pred CC
Q 010535 507 EL 508 (508)
Q Consensus 507 G~ 508 (508)
|+
T Consensus 426 G~ 427 (541)
T 1v25_A 426 GY 427 (541)
T ss_dssp CC
T ss_pred ce
Confidence 95
No 4
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=1.1e-60 Score=496.45 Aligned_cols=409 Identities=22% Similarity=0.333 Sum_probs=328.2
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH
Q 010535 36 LESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 36 ~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~ 115 (508)
+..+....|+.++|.++++++|+++|++... ++..+ +.+||+||.++++++|++|+++|+++||+|+++++|++++
T Consensus 13 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~a~~--~~~~~--~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 88 (550)
T 3rix_A 13 PFYPLEDGTAGEQLHKAMKRYALVPGTIAFT--DAHIE--VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF 88 (550)
T ss_dssp CSSCCCCSCHHHHHHHHHHHHHTSTTCEEEE--ETTTC--CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT
T ss_pred CCCCcccCCHHHHHHHHHHhCCCCceEEEee--ecCCC--cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccH
Confidence 3445566899999999999999999986220 11111 5899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcC
Q 010535 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 116 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
+++++||+++|++++|++|.++.+++.++++.++++++|++......+..... ..+.+..++.++.....
T Consensus 89 ~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------- 158 (550)
T 3rix_A 89 FMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQK-KLPIIQKIIIMDSKTDY--------- 158 (550)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHH-HCTTCCEEEETTCSSCB---------
T ss_pred HHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHh-hCCCcceEEEEcCCccc---------
Confidence 99999999999999999999999999999999999999999887766554432 22445666665543211
Q ss_pred ceeeeHHHHHhcCCC------CCCC-CCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcE
Q 010535 196 VSCFSWEEFLQLGTL------DCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDT 268 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (508)
.....+.++...... ...+ ....++++++|+|||||||.||||.++|+++...+......+ .......+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (550)
T 3rix_A 159 QGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPI--FGNQIIPDTA 236 (550)
T ss_dssp TTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTT--TSCCCCTTCE
T ss_pred cCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhh--ccccCCCCcE
Confidence 123455555543211 1111 122457899999999999999999999999998877655432 0125678999
Q ss_pred EEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHH
Q 010535 269 YFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (508)
Q Consensus 269 ~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (508)
+++.+|++|.+++...+.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++.
T Consensus 237 ~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------ 298 (550)
T 3rix_A 237 ILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKS------------------ 298 (550)
T ss_dssp EEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHC------------------
T ss_pred EEEechHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC------------------
Confidence 9999999999999888889999999999874 999999999999999999999999998652
Q ss_pred HHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCc-eeeeccccCCCcceee
Q 010535 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP-LTQGYGLTESCSGCFT 426 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~-l~~~YG~TE~~~~~~~ 426 (508)
...+..++ ++||.+++||+++++++.+++.+.++.. +++.||+||+++.++.
T Consensus 299 -------------------~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~ 351 (550)
T 3rix_A 299 -------------------TLIDKYDL--------SNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILI 351 (550)
T ss_dssp -------------------CGGGGSCC--------TTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEE
T ss_pred -------------------ccccccCc--------ccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceec
Confidence 11111222 3899999999999999999999999875 9999999999988776
Q ss_pred ccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcC
Q 010535 427 SLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQP 505 (508)
Q Consensus 427 ~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~ 505 (508)
...... ..+++|+|+|+++++|+|.+++..++ .|+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++|+
T Consensus 352 ~~~~~~-~~~~vG~~~~~~~~~i~d~~~~~~~~--~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~ 428 (550)
T 3rix_A 352 TPEGDD-KPGAVGKVVPFFEAKVVDLDTGKTLG--VNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDE 428 (550)
T ss_dssp CCTTCC-CTTEEEEECTTCEEEEECTTTCCBCC--TTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT
T ss_pred CCCCCC-CCCCcccccCCcEEEEEeCCCCcCCC--CCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeC
Confidence 655443 44899999999999999944455444 55999999999999999999999999999 799999999999999
Q ss_pred CCC
Q 010535 506 MEL 508 (508)
Q Consensus 506 ~G~ 508 (508)
||+
T Consensus 429 dG~ 431 (550)
T 3rix_A 429 DEH 431 (550)
T ss_dssp TCC
T ss_pred Cce
Confidence 995
No 5
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=3.5e-60 Score=491.68 Aligned_cols=393 Identities=15% Similarity=0.184 Sum_probs=326.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|+++++++++|
T Consensus 29 ~~tl~~~l~~~a~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA 99 (544)
T 3o83_A 29 DQPLTRILTVGVQSHPHSLAIICG---E------RQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFA 99 (544)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCceEEEcC---C------CceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
Confidence 478999999999999999999875 3 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh----hHhhcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
|+++|++++|+++.++.+++.++++.++++++|++..... ...............++.......
T Consensus 100 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 167 (544)
T 3o83_A 100 LLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQAT------------ 167 (544)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTT------------
T ss_pred HHHhCcEEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCcc------------
Confidence 9999999999999999999999999999999999886531 111222222234455555543321
Q ss_pred eeeHHHHHhcCCC-CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChH
Q 010535 198 CFSWEEFLQLGTL-DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (508)
Q Consensus 198 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 276 (508)
...+.++...... ........++++++|+|||||||.||||.++|+++...+......+ .+..+|++++.+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~ 242 (544)
T 3o83_A 168 DFGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEIC-----GLNSNTRLLCALPAP 242 (544)
T ss_dssp SEEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTT
T ss_pred ccchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHh-----CCCCCCeEEEecCcc
Confidence 1234444443321 1222445679999999999999999999999999999999888776 788999999999999
Q ss_pred HHHHHHH--HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 277 HIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 277 ~~~g~~~--~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|+++..+++...
T Consensus 243 h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------------------- 300 (544)
T 3o83_A 243 HNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAA---------------------- 300 (544)
T ss_dssp SHHHHHSSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHT----------------------
T ss_pred eEeecchHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchh----------------------
Confidence 9999874 7789999999999875 99999999999999999999999999876321
Q ss_pred hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcc
Q 010535 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFN 433 (508)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~ 433 (508)
....++ ++||.+++||+++++++.+++.+.+|+.+++.||+||++..+.........
T Consensus 301 ---------------~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~ 357 (544)
T 3o83_A 301 ---------------QYKDQI--------QSLKLLQVGGASFPESLARQVPEVLNCKLQQVFGMAEGLVNYTRLDDSDEQ 357 (544)
T ss_dssp ---------------TTHHHH--------TTCCEEEEESSCCCHHHHTHHHHHHCSEEEEEEECTTSCEEECCTTSCHHH
T ss_pred ---------------hccccC--------CcceEEEEcCCCCCHHHHHHHHHHhCCcEEeeeccccccceeecCCCchhh
Confidence 112233 389999999999999999999999999999999999987655443333333
Q ss_pred ccccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
..+++|+|+ ++++++|+| +++..++.| +.|||+|+|++++.||+++|+.+.+.| .+|||+|||+|++|+||+
T Consensus 358 ~~~~~G~p~~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~ 431 (544)
T 3o83_A 358 IFTTQGRPISSDDEIKIVD-EQYREVPEG--EIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPDGN 431 (544)
T ss_dssp HHHCCCEESCTTCEEEEEC-TTSCBCCTT--CCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTTSC
T ss_pred ccCCCceecCCCcEEEEEC-CCCCCCCCC--CeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCCCC
Confidence 447899996 899999999 888776655 899999999999999999999999999 799999999999999985
No 6
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=3.6e-60 Score=494.18 Aligned_cols=400 Identities=18% Similarity=0.193 Sum_probs=329.0
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHH
Q 010535 39 PAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (508)
Q Consensus 39 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~ 118 (508)
+..++.+.++|+++|+++|+++|+++. +. .+..+.+||+||.++++++|++|+++|+++||+|+++++|+++++++
T Consensus 52 ~~~~n~~~~~l~~~a~~~pd~~Al~~~---~~-~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~ 127 (580)
T 3etc_A 52 PENFNFAYDVVDVYARDSPEKLAMIWC---DD-YGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYC 127 (580)
T ss_dssp CSSCCHHHHTHHHHHHHCTTCEEEEEE---ES-SSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHH
T ss_pred cccchHHHHHHHHHHhhCCCCEEEEEE---cC-CCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 355677779999999999999999986 43 23447899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCCh--hhHhhcCccCCCCc-cEEEEecCCChhhhHHhhhcC
Q 010535 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI--PSILSCLPRCCLYL-KTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 195 (508)
+|||+++|++++|++|.++.+++.++++.++++++|++.+.. ..+.+.... ++.+ ..++.++... .
T Consensus 128 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~ 196 (580)
T 3etc_A 128 MLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAE-CGDIPLKKAKVGGDV----------L 196 (580)
T ss_dssp HHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHH-HCSCCCEEEEESSSC----------C
T ss_pred HHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhh-CCCcceEEEEeCCcc----------c
Confidence 999999999999999999999999999999999999988754 333332221 1222 3444443221 1
Q ss_pred ceeeeHHHHHhcCCCCCC-C---CCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEE
Q 010535 196 VSCFSWEEFLQLGTLDCE-L---PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFS 271 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (508)
..+.++.+.......... + ....++++++|+|||||||.||+|.++|.+++..+......+ .+..++++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 271 (580)
T 3etc_A 197 EGWIDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQ-----NVEDDGLHYT 271 (580)
T ss_dssp TTCEEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTS-----CCCTTCEEEE
T ss_pred cccccHHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhh-----CCCCCceEEE
Confidence 235567666655422111 1 245789999999999999999999999999888776644433 7788999999
Q ss_pred ecChHHHHHHHH-HHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHH
Q 010535 272 FLPLAHIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (508)
Q Consensus 272 ~~pl~~~~g~~~-~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (508)
..|++|..++.. ++.++..|+++++.+ +++..+++.++++++|+++++|++++.|++.
T Consensus 272 ~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~------------------ 333 (580)
T 3etc_A 272 VADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE------------------ 333 (580)
T ss_dssp CCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTS------------------
T ss_pred eCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhc------------------
Confidence 999999888774 778899999998873 4899999999999999999999999988541
Q ss_pred HHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeec
Q 010535 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTS 427 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~ 427 (508)
.....++ ++||.+++||+++++++.++|.+.+|+.+++.||+||++..++..
T Consensus 334 --------------------~~~~~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~ 385 (580)
T 3etc_A 334 --------------------DLSHYNF--------STLKYAVVAGEPLNPEVFNRFLEFTGIKLMEGFGQTETVVTIATF 385 (580)
T ss_dssp --------------------CC---CC--------TTCCEEEECSSCCCHHHHHHHHHHHSCCCEEEECCTTSSCCEECC
T ss_pred --------------------ccccCCC--------ccceEEEEccCCCCHHHHHHHHHHhCCeEecccccccccceeecC
Confidence 1111222 389999999999999999999998999999999999998766654
Q ss_pred cCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec-----CcccccccCCcccccccccCCccccCcEEE
Q 010535 428 LADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG-----NTLFSGYYKRPDLTEEVIVDGWFHTGDIGE 502 (508)
Q Consensus 428 ~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g-----~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~ 502 (508)
... ....+++|+|+|+++++|+| ++|..++.| +.|||+|+| +.++.||+++|+.+.+.|.+|||+|||+|+
T Consensus 386 ~~~-~~~~~~~G~p~~~~~v~ivd-~~g~~~~~g--~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~ 461 (580)
T 3etc_A 386 PWM-EPKPGSIGKPTPGYKIELMD-RDGRLCEVG--EEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAW 461 (580)
T ss_dssp TTS-CCCTTCCBEECTTCEEEEEC-TTSCBCCTT--CCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEE
T ss_pred CCC-CCCCCccccCCCCCEEEEEC-CCCCCCCCC--CceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEE
Confidence 433 33458999999999999999 888776655 899999997 789999999999999999999999999999
Q ss_pred EcCCCC
Q 010535 503 WQPMEL 508 (508)
Q Consensus 503 ~d~~G~ 508 (508)
+|+||+
T Consensus 462 ~d~dG~ 467 (580)
T 3etc_A 462 MDEDGY 467 (580)
T ss_dssp ECTTSC
T ss_pred ECCCCc
Confidence 999996
No 7
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.7e-60 Score=490.99 Aligned_cols=391 Identities=22% Similarity=0.307 Sum_probs=323.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+...|+.++|+++++++|+++|+++. +.. +.+||+||.++++++|.+|.++|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~ 85 (517)
T 3r44_A 13 DKMKNIGWMLRQRATVSPRLQAYVEP---STD----VRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLF 85 (517)
T ss_dssp GGGGCHHHHHHHHHHHSTTSEEEEEG---GGT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred ccccCHHHHHHHHHHhCCCCeEEEeC---CcC----ceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHH
Confidence 45689999999999999999999876 322 58999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
|||+++|++++||+|.++.+++.++++.++++++|++......+....... .....++.... ..
T Consensus 86 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------~~ 149 (517)
T 3r44_A 86 YGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQA-DPPGTVTDWIG---------------AD 149 (517)
T ss_dssp HHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSS-SCCTTCCEEEE---------------HH
T ss_pred HHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhcc-CCccEEEEccC---------------cc
Confidence 999999999999999999999999999999999999987665543332211 11111111100 01
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.+.+...............++++++|+|||||||.||||.++|+++...+......+ .+..+|++++.+|++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~ 224 (517)
T 3r44_A 150 SLAERLRSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTI-----DVRYRDRLLLPLPMFHVA 224 (517)
T ss_dssp HHHHHHHHCCCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHS-----CCCTTCEEEECSCTTSHH
T ss_pred cHHHHhhccCcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhc-----CCCCCCEEEEeCchHHHH
Confidence 234444333333344456789999999999999999999999999999998887776 788999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhcc
Q 010535 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (508)
++...+.+++.|+++++.+. ++..+++.++++++|++.++|+++..+.+...
T Consensus 225 ~~~~~~~~~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------------- 277 (517)
T 3r44_A 225 ALTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPE--------------------------- 277 (517)
T ss_dssp HHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHH---------------------------
T ss_pred HHHHHHHHHhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc---------------------------
Confidence 99876666669999998874 99999999999999999999999998865211
Q ss_pred CCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC-cccccc
Q 010535 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FNMIGT 437 (508)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~s 437 (508)
....++ +++|.+++||+++++++.+++.+. ++.+++.||+||+++.++...... ....++
T Consensus 278 ----------~~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~ 338 (517)
T 3r44_A 278 ----------FAELDA--------PDFRYFITGGAPMPEALIKIYAAK-NIEVVQGYALTESCGGGTLLLSEDALRKAGS 338 (517)
T ss_dssp ----------HHHCCC--------TTCCEEEECSSCCCHHHHHHHHHT-TCEEEEEEECGGGTTCEEEECGGGTTTTTTC
T ss_pred ----------cccCCC--------CcccEEEECCCCCCHHHHHHHHhc-CCcEEEeecccccccceeecCCccccccCCC
Confidence 111111 389999999999999999999987 999999999999988776654433 344589
Q ss_pred cccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 438 ~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+|+|+++++++|+| +++..++.+ .|||+|+|++++.||+++|+.+.+.|.+|||+|||+|++|+||+
T Consensus 339 ~G~~~~~~~~~i~d-~~~~~~~~g---~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~~dG~ 405 (517)
T 3r44_A 339 AGRATMFTDVAVRG-DDGVIREHG---EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDDEGY 405 (517)
T ss_dssp CBEECTTEEEEEEC-TTSCEESSE---EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEEEEECTTSC
T ss_pred CCcCCCCeEEEEEC-CCCCCCCCC---CeEEEEeCcchhhhhCCChhhhHhhhcCCCEecceeEEEcCCee
Confidence 99999999999999 787766554 79999999999999999999999999999999999999999985
No 8
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=4.2e-60 Score=490.60 Aligned_cols=390 Identities=18% Similarity=0.196 Sum_probs=318.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|+++++++++|
T Consensus 24 ~~tl~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 94 (539)
T 1mdb_A 24 GETFGDLLRDRAAKYGDRIAITCG---N------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFA 94 (539)
T ss_dssp SCCHHHHHHHHHHHHTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCEEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 478999999999999999999865 3 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh----hHhhcCccCCCCccEEEEecCCChhhhHHhhhcCce
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (508)
|+++|++++|++|.++.+++.++++.++++++|+++.... ..........+.++.++..+....
T Consensus 95 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 162 (539)
T 1mdb_A 95 LFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEE------------ 162 (539)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTT------------
T ss_pred HHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCccc------------
Confidence 9999999999999999999999999999999999875321 111111111233444444332110
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHH
Q 010535 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
+.++..............++++++++|||||||.||||.++|+++...+......+ .+..++++++.+|++|
T Consensus 163 ---~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h 234 (539)
T 1mdb_A 163 ---FLPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVC-----WLDHSTVYLAALPMAH 234 (539)
T ss_dssp ---SEEGGGCCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECSCTTS
T ss_pred ---hhhhhhccccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCCEEEEeecccc
Confidence 11111111111122345678999999999999999999999999999988877766 7789999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.+++.. ++.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++......
T Consensus 235 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------- 294 (539)
T 1mdb_A 235 NYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRR-------------------- 294 (539)
T ss_dssp HHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCC--------------------
T ss_pred cchhhHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccC--------------------
Confidence 999874 7889999999999874 99999999999999999999999999876432110
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~ 434 (508)
.++ ++||.+++||+++++++.+++++.+|+.+++.||+||++..+..........
T Consensus 295 -----------------~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~ 349 (539)
T 1mdb_A 295 -----------------DDL--------SSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEII 349 (539)
T ss_dssp -----------------CCC--------TTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTTSCEEECCTTSCHHHH
T ss_pred -----------------CCc--------cceeEEEEcCCCCCHHHHHHHHHHhCCcEEEEEcCCCCcccccCCCCcHHhc
Confidence 011 3899999999999999999999989999999999999654333221111223
Q ss_pred ccccccccCC-eEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 435 IGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 435 ~~s~G~p~~~-~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
.+++|+|+++ .+++|+| +++..++.| +.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 350 ~~~~G~p~~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~ 422 (539)
T 1mdb_A 350 VNTQGKPMSPYDESRVWD-DHDRDVKPG--ETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGY 422 (539)
T ss_dssp HHCCCEESSTTCEEEEEC-TTSCBCCTT--CCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSC
T ss_pred CCCCCcccCCCceEEEEC-CCCCCCcCC--CcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEECCCCc
Confidence 4789999976 5899999 888766654 899999999999999999999999999 699999999999999995
No 9
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=3.6e-59 Score=484.30 Aligned_cols=414 Identities=22% Similarity=0.313 Sum_probs=327.7
Q ss_pred CCcccccccccCCCCCCCCCCCCHHH-HHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCC
Q 010535 22 GGPVYRCIYAKDGLLESPAGLESPWQ-FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (508)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~t~~~-~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~ 100 (508)
.+.+|++..+.... +...++.+ +|.++++++ +++|+++. +.. +.+||+||.++++++|.+|++.|++
T Consensus 8 ~~~~~~~~~~~~~~----p~~~~l~~~~l~~~~~~~-~~~A~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~ 75 (548)
T 2d1s_A 8 ENIVVGPKPFYPIE----EGSAGTQLRKYMERYAKL-GAIAFTNA---VTG----VDYSYAEYLEKSCCLGKALQNYGLV 75 (548)
T ss_dssp TTSEECCCCSSCCC----SSCHHHHHHHHHHHHHHH-TCEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHHTCC
T ss_pred cceEecCCCCCCCC----CCcCcHHHHHHHhhhccc-CCceEEEc---CCC----CEeeHHHHHHHHHHHHHHHHHcCCC
Confidence 34566665533222 22358999 899999999 99999863 221 5799999999999999999999999
Q ss_pred CCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEe
Q 010535 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (508)
Q Consensus 101 ~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~ 180 (508)
+||+|+++++|+++++++++||+++|++++||+|.++.+++.++++.++++++|++......+...... .+....++.+
T Consensus 76 ~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~ 154 (548)
T 2d1s_A 76 VDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKT-VTTIKTIVIL 154 (548)
T ss_dssp TTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHH-STTCCEEEET
T ss_pred CCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcC-CCCCCEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999876655443211 1223445554
Q ss_pred cCCChhhhHHhhhcCceeeeHHHHHhcCCCC-CCCCCC------CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhh
Q 010535 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTLD-CELPPK------KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 253 (508)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~ 253 (508)
+.... ......++++....... ...... .++++++++|||||||.||+|.++|+++...+....
T Consensus 155 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~ 225 (548)
T 2d1s_A 155 DSKVD---------YRGYQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHAR 225 (548)
T ss_dssp TCSSC---------BTTBCBHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHT
T ss_pred CCccc---------ccccccHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhh
Confidence 33210 00123466665443111 111111 238999999999999999999999999998887765
Q ss_pred hhhhhccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEec-CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHH
Q 010535 254 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR-GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 331 (508)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 331 (508)
..+. ...+..+|++++.+|++|.+++.. ++.++ .|+++++.+ +++..+++.++++++|+++++|++++.|++.
T Consensus 226 ~~~~--~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-- 300 (548)
T 2d1s_A 226 DPIY--GNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKS-- 300 (548)
T ss_dssp CTTT--SCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHC--
T ss_pred chhh--ccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhC--
Confidence 4410 126678999999999999999876 55666 999999887 4999999999999999999999999988641
Q ss_pred HhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCc
Q 010535 332 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 410 (508)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~ 410 (508)
+..+..++ ++||.+++||+++++++.+++.+.+ +..
T Consensus 301 -----------------------------------~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 337 (548)
T 2d1s_A 301 -----------------------------------ELLNKYDL--------SNLVEIASGGAPLSKEVGEAVARRFNLPG 337 (548)
T ss_dssp -----------------------------------SCGGGSCC--------TTCCEEEECSSCCCHHHHHHHHHHTTCSC
T ss_pred -----------------------------------cccccccc--------cceeEEEEcCccCCHHHHHHHHHHcCCCc
Confidence 11111112 3899999999999999999999998 688
Q ss_pred eeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc
Q 010535 411 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 490 (508)
Q Consensus 411 l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~ 490 (508)
+++.||+||++.+++..... ....+++|+|+|+++++|+|.+++..++ .|+.|||+|+|++++.||+++++.+.+.|
T Consensus 338 i~~~YG~TE~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~GEl~v~g~~v~~GY~~~~~~t~~~f 414 (548)
T 2d1s_A 338 VRQGYGLTETTSAIIITPEG-DDKPGASGKVVPLFKAKVIDLDTKKSLG--PNRRGEVCVKGPMLMKGYVNNPEATKELI 414 (548)
T ss_dssp CEEEEECGGGSSEEEECCTT-CCCTTCCBEECTTCEEEEECTTTCCBCC--TTCCEEEEEESTTSCSEETTCHHHHHHHB
T ss_pred eeeccccccccceeeecCcc-cCCCCCCCccCCCceEEEEeCCcCccCC--CCCCeEEEECCHHHhhhhcCChHHhhhcc
Confidence 99999999998877664433 2344899999999999999944555554 45899999999999999999999999999
Q ss_pred -cCCccccCcEEEEcCCCC
Q 010535 491 -VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 491 -~~gw~~TGDlg~~d~~G~ 508 (508)
.+|||+|||+|++|+||+
T Consensus 415 ~~~g~~~TGDl~~~~~dG~ 433 (548)
T 2d1s_A 415 DEEGWLHTGDIGYYDEEKH 433 (548)
T ss_dssp CTTSCEEEEEEEEECTTCC
T ss_pred cCCcEEEccCEEEEcCCCe
Confidence 689999999999999985
No 10
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=7e-59 Score=478.71 Aligned_cols=385 Identities=21% Similarity=0.269 Sum_probs=319.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....|+.++|+++++++||++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 3 ~~~~tl~~~l~~~a~~~pd~~Al~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~ 73 (509)
T 3ivr_A 3 LHDFTLADVYRRNAALFPDRTAFMVD---G------VRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELI 73 (509)
T ss_dssp TTCCCHHHHHHHHHHHSTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHCCCceEEEEC---C------cEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34689999999999999999999875 3 68999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++||+|.++.+++.++++.++++++|++......+..... .......++.+++...
T Consensus 74 lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------------- 138 (509)
T 3ivr_A 74 GAVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLP-SLGGVKKAYAIGDGSG-------------- 138 (509)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGG-GCSSCCEEEESSCCCS--------------
T ss_pred HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhc-ccCCceEEEEcCCCCc--------------
Confidence 9999999999999999999999999999999999999987766444432 2345556666544211
Q ss_pred eHHHHHh-cCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHH
Q 010535 200 SWEEFLQ-LGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (508)
Q Consensus 200 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 278 (508)
.+.++.. ............++++++|+|||||||.||||.++|+++...+......+ .+..+|++++.+|++|.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~ 213 (509)
T 3ivr_A 139 PFAPFKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAW-----RLTEADVNLGMLPLFHV 213 (509)
T ss_dssp SCEEGGGTCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSH
T ss_pred ChhhHhhccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEeCCCcch
Confidence 1112222 11122233456789999999999999999999999999999999887776 78899999999999999
Q ss_pred HHHHHHHHH-HhcCcEEEEecCCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 279 YDQIIETHC-IHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 279 ~g~~~~~~~-l~~G~~~v~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
+++...+.+ +..|+.+++..+++..+++.++++++|+++++|+++..+++..
T Consensus 214 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--------------------------- 266 (509)
T 3ivr_A 214 TGLGLMLTLQQAGGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--------------------------- 266 (509)
T ss_dssp HHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC---------------------------
T ss_pred hHHHHHHHHHHhCCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc---------------------------
Confidence 999876664 4455555555569999999999999999999999999987531
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCCccccc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIG 436 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~ 436 (508)
...++ +++|.++.+|++ ++.+.+.+.+ ++.+++.||+||++++++........ .
T Consensus 267 ------------~~~~l--------~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~--~ 321 (509)
T 3ivr_A 267 ------------APAQL--------ASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAPYRDRP--K 321 (509)
T ss_dssp ------------CGGGG--------TTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEEGGGST--T
T ss_pred ------------cccch--------hhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCccccCC--C
Confidence 00011 378999999987 8888888888 89999999999999877765543322 4
Q ss_pred ccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 437 TVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 437 s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
++|+|+++++++|+| +++..++.| +.|||+|+|++++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 322 ~~G~p~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~~dG~ 390 (509)
T 3ivr_A 322 SAGRPLFWRTVAVVD-AEDRPLPPG--EVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFDADGY 390 (509)
T ss_dssp SCCEECTTCEEEEEC-TTSCBCCTT--CCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEECTTSC
T ss_pred cccccCCCcEEEEEC-CCCCCCCCC--CceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEECCCce
Confidence 699999999999999 888766655 899999999999999999999999999999999999999999985
No 11
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=1.1e-58 Score=482.22 Aligned_cols=397 Identities=17% Similarity=0.234 Sum_probs=326.9
Q ss_pred CCCCCHHHHHHHHHHh-----CCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCcH
Q 010535 40 AGLESPWQFFCDSAKR-----IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCP 113 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~-----~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-gv~~gd~Vai~~~n~~ 113 (508)
...+++.++|++++++ +|+++|+++. +. ++..+.+||+||.++++++|++|.+. |+++||+|+++++|++
T Consensus 35 ~~~~~~~~~l~~~a~~~~a~~~p~~~al~~~---~~-~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~ 110 (570)
T 3c5e_A 35 AKFNFASDVLDHWADMEKAGKRPPSPALWWV---NG-KGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVP 110 (570)
T ss_dssp SBCCHHHHTHHHHHHHHHTTSSCCCEEEEEE---CS-SSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCH
T ss_pred ccccHHHHHHHHHHhhccccCCCCceEEEEE---cC-CCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCH
Confidence 3456778999999999 9999999986 42 22347899999999999999999999 9999999999999999
Q ss_pred hHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhh
Q 010535 114 EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE 193 (508)
Q Consensus 114 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 193 (508)
+++++++||+++|++++|++|.++.+++.++++.++++++|++......+..... ..+.++.++.++....
T Consensus 111 e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------- 181 (570)
T 3c5e_A 111 EWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVAS-ECPSLRIKLLVSEKSC-------- 181 (570)
T ss_dssp HHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGG-GCTTCCEEEEESSSCC--------
T ss_pred HHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhh-cCCceeEEEEecccCc--------
Confidence 9999999999999999999999999999999999999999999887766544332 2244555665543211
Q ss_pred cCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHH--HHHhhhhhhhhccccCCCCcEEEE
Q 010535 194 LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA--EVLSVDQMFVVTGKVCSEEDTYFS 271 (508)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 271 (508)
..+..++++..............++++++|+|||||||.||||.++|+ ++. ..... ..+ .+..+|++++
T Consensus 182 --~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~-----~~~~~d~~~~ 252 (570)
T 3c5e_A 182 --DGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWT-----GLQASDIMWT 252 (570)
T ss_dssp --TTSEEHHHHHHHSCSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTT-----SCCTTCEEEE
T ss_pred --cccccHHHHhhcccccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhc-----CCCCCceEEE
Confidence 113456666654422222334567899999999999999999999999 444 33332 333 6788999999
Q ss_pred ecChHHHHHHH-HHHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHH
Q 010535 272 FLPLAHIYDQI-IETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (508)
Q Consensus 272 ~~pl~~~~g~~-~~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (508)
.+|++|.+++. .++.++..|+++++.. +++..+++.++++++|+++++|++++.+++.-
T Consensus 253 ~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----------------- 315 (570)
T 3c5e_A 253 ISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD----------------- 315 (570)
T ss_dssp CCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-----------------
T ss_pred cCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-----------------
Confidence 99999999987 4778999999999885 49999999999999999999999999886410
Q ss_pred HHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeec
Q 010535 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTS 427 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~ 427 (508)
....++ ++||.+++||+++++++.+++.+.+|+.+++.||+||++..++..
T Consensus 316 ---------------------~~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~ 366 (570)
T 3c5e_A 316 ---------------------LSSYKF--------PHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGLTCMVS 366 (570)
T ss_dssp ---------------------TTTCCC--------TTCCEEEEESSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECC
T ss_pred ---------------------cccccc--------ccceEEEEcCCcCCHHHHHHHHHHhCCchhhccchhhcccceecC
Confidence 000011 389999999999999999999998899999999999998766544
Q ss_pred cCCCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEe-----cCcccccccCCcccccccccCCccccCcEEE
Q 010535 428 LADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLR-----GNTLFSGYYKRPDLTEEVIVDGWFHTGDIGE 502 (508)
Q Consensus 428 ~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~-----g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~ 502 (508)
... ....+++|+|+++++++|+| +++..++.| +.|||+|+ |++++.||+++++.+.+.|.+|||+|||+|+
T Consensus 367 ~~~-~~~~~~vG~p~~~~~v~i~d-~~g~~~~~G--~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg~ 442 (570)
T 3c5e_A 367 KTM-KIKPGYMGTAASCYDVQIID-DKGNVLPPG--TEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGI 442 (570)
T ss_dssp TTS-CCCTTCCCEECTTCCEEEEC-TTSCBCCTT--CCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEEE
T ss_pred ccc-ccCCCcccccCCCceEEEEC-CCCCCCCCC--CCCeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeEE
Confidence 332 23448999999999999999 888766654 89999999 9999999999999999999999999999999
Q ss_pred EcCCCC
Q 010535 503 WQPMEL 508 (508)
Q Consensus 503 ~d~~G~ 508 (508)
+|+||+
T Consensus 443 ~d~dG~ 448 (570)
T 3c5e_A 443 KDEDGY 448 (570)
T ss_dssp ECTTSC
T ss_pred EcCCce
Confidence 999995
No 12
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1.2e-59 Score=481.63 Aligned_cols=394 Identities=16% Similarity=0.182 Sum_probs=309.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|+++++++|+++|+++....++.++.++.+||+||.++++++|++|.++|+ +||+|+++++|++++++++|
T Consensus 22 ~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~l 100 (480)
T 3t5a_A 22 SVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFL 100 (480)
T ss_dssp --CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHH
T ss_pred CcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHH
Confidence 35799999999999999999999872111334455789999999999999999999996 99999999999999999999
Q ss_pred HHHhcCCEEEeccC---CCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCC-CccEEEEecCCChhhhHHhhhcCc
Q 010535 121 ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL-YLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 121 A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
||+++|++++||++ .++.+++.++++.++++++|++......+.+....... ....++.++....
T Consensus 101 A~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 169 (480)
T 3t5a_A 101 GALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLLDL----------- 169 (480)
T ss_dssp HHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGSCT-----------
T ss_pred HHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEeccccc-----------
Confidence 99999999999999 78899999999999999999999887776554432211 1112333221110
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCC------CcEEE
Q 010535 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSE------EDTYF 270 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~------~~~~l 270 (508)
............++++++|+|||||||.||||+++|+++...+......+ .... +++++
T Consensus 170 ----------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~~~d~~l 234 (480)
T 3t5a_A 170 ----------DAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGY-----FADTDGIPPPNSALV 234 (480)
T ss_dssp ----------TCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHH-----CTTTTTCCCTTEEEE
T ss_pred ----------ccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHh-----ccccccCCCCCCeEE
Confidence 11112223345678999999999999999999999999999988877766 4444 89999
Q ss_pred EecChHHHHHHH-HHHHHHhcCcEEEEec-C----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 271 SFLPLAHIYDQI-IETHCIHKGCSIGFWR-G----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 271 ~~~pl~~~~g~~-~~~~~l~~G~~~v~~~-~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
+.+|++|.+|+. .++.+++.|+++++.+ . ++..+++.++++++| +..+|+++..++.....
T Consensus 235 ~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~------------ 301 (480)
T 3t5a_A 235 SWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTT------------ 301 (480)
T ss_dssp ECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCC------------
T ss_pred EeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcC------------
Confidence 999999999987 4788999999999986 2 899999999999999 88999998887642110
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC------Cceeeecccc
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGLT 418 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~------~~l~~~YG~T 418 (508)
.+.....++ ++||.+++||+++++++.+++.+.++ ..+++.||+|
T Consensus 302 ---------------------~~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~T 352 (480)
T 3t5a_A 302 ---------------------DDDMAGRDL--------GNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLA 352 (480)
T ss_dssp ---------------------TGGGTTCCC--------TTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEET
T ss_pred ---------------------cccccccch--------hhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhcccccccc
Confidence 011111122 38999999999999999999999874 3799999999
Q ss_pred CCCcceeeccCCC------------------------cccccccccccCCeEEEEeecCC-CCccCCCCCCCceEEEecC
Q 010535 419 ESCSGCFTSLADV------------------------FNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGN 473 (508)
Q Consensus 419 E~~~~~~~~~~~~------------------------~~~~~s~G~p~~~~~~~i~d~~~-~~~~~~~~~~~GEl~v~g~ 473 (508)
|++..++...... ....+++|+|++ ++++|+| ++ +..++. |+.|||+|+|+
T Consensus 353 E~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~-~~~~ivd-~~~g~~~~~--g~~GEl~v~g~ 428 (480)
T 3t5a_A 353 EATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS-PIVRIVD-SDTCIECPD--GTVGEIWVHGD 428 (480)
T ss_dssp TTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-SEEEEEE-TTTTEECCT--TBCEEEEEEST
T ss_pred ccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-CEEEEEc-CCCCcCCCC--CCEEEEEEeCC
Confidence 9998877655432 123368999999 9999999 55 555554 59999999999
Q ss_pred cccccccCCcccccccc------------cCCccccCcEEEEcCCCC
Q 010535 474 TLFSGYYKRPDLTEEVI------------VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 474 ~v~~gY~~~~~~~~~~~------------~~gw~~TGDlg~~d~~G~ 508 (508)
+++.||+++|+.|.+.| .+|||+|||+|++| ||+
T Consensus 429 ~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-dG~ 474 (480)
T 3t5a_A 429 NVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-DGK 474 (480)
T ss_dssp TSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-TTE
T ss_pred ccccccccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEE-CCE
Confidence 99999999999999988 35699999999997 884
No 13
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=2.2e-58 Score=474.21 Aligned_cols=381 Identities=20% Similarity=0.273 Sum_probs=307.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
+.|+.++|+++++++|+++|+.+. +.. +.+||+||.++++++|++|+++|+++||+|+++++|+++++++++|
T Consensus 1 M~tl~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 73 (504)
T 1t5h_X 1 MQTVNEMLRRAATRAPDHCALAVP---ARG----LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILA 73 (504)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEEET---TTT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCCCceEEEEc---CCC----ceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 478999999999999999999864 322 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEE--cCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV--QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
|+++|++++|++|.++.+++.++++.++++++|+ +......+..... .++ ++.+
T Consensus 74 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~----~~~-~~~~------------------- 129 (504)
T 1t5h_X 74 LHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGS----GAR-IIFL------------------- 129 (504)
T ss_dssp HHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCC----CCE-EEEG-------------------
T ss_pred HHHhCcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccc----cce-eEEe-------------------
Confidence 9999999999999999999999999999999999 6654443311111 111 2211
Q ss_pred eHHHHHhcC-----CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccC--CCCcEEEEe
Q 010535 200 SWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSF 272 (508)
Q Consensus 200 ~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ 272 (508)
+++.... ..........++++++|+|||||||.||||.++|+++...+......+ .+ ..++++++.
T Consensus 130 --~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~l~~ 202 (504)
T 1t5h_X 130 --GDLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQV-----GLRHGRHNVVLGL 202 (504)
T ss_dssp --GGTEETTEECCCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTT-----CCCSSTTCEEEEC
T ss_pred --cchhhcCcccccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhh-----CCCCCCCceEEee
Confidence 1111110 111111345678999999999999999999999999999888876655 55 788999999
Q ss_pred cChHHHHHHH-HHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHH
Q 010535 273 LPLAHIYDQI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (508)
Q Consensus 273 ~pl~~~~g~~-~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (508)
+|++|.+++. ..+.++..|+++++.+. ++..+++.++++++|+++++|++++.|++......
T Consensus 203 ~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---------------- 266 (504)
T 1t5h_X 203 MPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAG---------------- 266 (504)
T ss_dssp SCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTT----------------
T ss_pred cchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhcccc----------------
Confidence 9999999985 57889999999999874 99999999999999999999999999875321000
Q ss_pred HHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCC
Q 010535 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD 430 (508)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~ 430 (508)
...++ ++||.+++||+++++++.+++++.++..+++.||+||++ .+....
T Consensus 267 -------------------~~~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~-~~~~~~-- 316 (504)
T 1t5h_X 267 -------------------SSLKL--------DSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAM-NSLYMR-- 316 (504)
T ss_dssp -------------------CCCCC--------TTCCEEEECCTTCCHHHHHHHHHHCCSEEEEEEEETTTE-EEEEEE--
T ss_pred -------------------ccccC--------ccccEEEEcCCcCCHHHHHHHHHhcCcceeeeecccccc-cccccc--
Confidence 00011 389999999999999999999999999999999999983 332222
Q ss_pred CcccccccccccCCeEEEEeecCCC-CccCCCCCCCceEEEe-cCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 431 VFNMIGTVGVPMTTVEARLESVPEM-GYDALSSVPRGEICLR-GNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 431 ~~~~~~s~G~p~~~~~~~i~d~~~~-~~~~~~~~~~GEl~v~-g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
....+++|+|.++++++|+| +++ ...++..|+.|||+|+ |+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 317 -~~~~~~~g~p~~~~~~~i~~-~~~~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~TGDlg~~~~dG~ 394 (504)
T 1t5h_X 317 -QPKTGTEMAPGFFSEVRIVR-IGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPEGT 394 (504)
T ss_dssp -SCSSSSEEBCCTTCCEEEEC-TTSCTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSC
T ss_pred -CCCCCccccCCCCCceeEEe-ccCCCCCcCCCCCcceEEEeCCceeeceecCCchhhhhhhcCCccccCcEEEECCCce
Confidence 22347899999999999999 665 1123345589999999 8999999999999999999999999999999999995
No 14
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=9.2e-59 Score=490.16 Aligned_cols=409 Identities=14% Similarity=0.194 Sum_probs=328.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.+++.++|+++++++|+++|+++. +..++..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 75 ~n~~~~~l~~~a~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA 151 (652)
T 1pg4_A 75 LNLAANCLDRHLQENGDRTAIIWE---GDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLA 151 (652)
T ss_dssp ECHHHHHTGGGHHHHTTSEEEEEE---CSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred hhHHHHHHHHHhccCCCceEEEEE---cCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 356888999999999999999986 43334457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh---------hHhhcCccCC-CCccEEEEecCCChhhhHHh
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCC-LYLKTIVSFANVSSSQKKEA 191 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 191 (508)
|+++|++++|+++.++.+++.+++++++++++|+++.... .+.+...... ..++.++.++.......
T Consensus 152 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~--- 228 (652)
T 1pg4_A 152 CARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDID--- 228 (652)
T ss_dssp HHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCC---
T ss_pred HHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCccc---
Confidence 9999999999999999999999999999999999876421 1222221110 13456666643211000
Q ss_pred hhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHH-hhhhhhhhccccCCCCcEEE
Q 010535 192 EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL-SVDQMFVVTGKVCSEEDTYF 270 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 270 (508)
........|+++..............++++++|+|||||||.||||+++|++++..+. .....+ ++..+|+++
T Consensus 229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l 302 (652)
T 1pg4_A 229 -WQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVF-----DYHPGDIYW 302 (652)
T ss_dssp -CCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHT-----TCCTTCEEE
T ss_pred -ccCCCceeHHHHHhhcCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 0011234677777644322333445679999999999999999999999999887664 333444 678999999
Q ss_pred EecChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 271 SFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 271 ~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
+.+|++|..++. .++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.|++....
T Consensus 303 ~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------ 370 (652)
T 1pg4_A 303 CTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDK------------ 370 (652)
T ss_dssp ECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGG------------
T ss_pred EccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCcc------------
Confidence 999999999985 57899999999999863 789999999999999999999999998642110
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC---CceeeeccccCCC
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESC 421 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~---~~l~~~YG~TE~~ 421 (508)
.....++ ++||.+++||+++++++.+++.+.+| +.+++.||+||++
T Consensus 371 -----------------------~~~~~~l--------~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~ 419 (652)
T 1pg4_A 371 -----------------------AIEGTDR--------SSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETG 419 (652)
T ss_dssp -----------------------GTTTCCC--------TTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGS
T ss_pred -----------------------ccccCCc--------CceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCcccc
Confidence 0111112 38999999999999999999999887 8999999999999
Q ss_pred cceeeccCC-CcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEec--CcccccccCCcccccccc---cCCcc
Q 010535 422 SGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGWF 495 (508)
Q Consensus 422 ~~~~~~~~~-~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~~~~~~---~~gw~ 495 (508)
+.++..... .....+++|+|++|++++|+| ++|..++.| +.|||+|+| |+++.||+++++.+.+.| .+|||
T Consensus 420 ~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v~~g--~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y 496 (652)
T 1pg4_A 420 GFMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQEGA--TEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMY 496 (652)
T ss_dssp SCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSS--EEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSE
T ss_pred cceecCCCCCcCccCCccccCcCCCeEEEEC-CCCCCcCCC--ceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEE
Confidence 877665433 234458999999999999999 888766654 899999999 799999999998887776 38999
Q ss_pred ccCcEEEEcCCCC
Q 010535 496 HTGDIGEWQPMEL 508 (508)
Q Consensus 496 ~TGDlg~~d~~G~ 508 (508)
+|||+|++|+||+
T Consensus 497 ~TGDlg~~d~dG~ 509 (652)
T 1pg4_A 497 FSGDGARRDEDGY 509 (652)
T ss_dssp EEEEEEEECTTSC
T ss_pred ECCcEEEEcCCCc
Confidence 9999999999996
No 15
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=9.3e-59 Score=483.72 Aligned_cols=374 Identities=18% Similarity=0.221 Sum_probs=310.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
+...++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|++++++++
T Consensus 72 ~~~~~l~~~l~~~a~~~pd~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~ 142 (570)
T 4gr5_A 72 PAGACVHELFEAQAARAPDAVALLHE---A------DELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVAL 142 (570)
T ss_dssp CCSCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred CccCCHHHHHHHHHHHCCCCeEEECC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHH
Confidence 45679999999999999999999875 3 58999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 199 (508)
+||+++|++++||+|.++.+++.++++.++++++|++......+ .....++..+ ...
T Consensus 143 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~-~~~-------------- 199 (570)
T 4gr5_A 143 LAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRL--------TGTTTLYVED-EAA-------------- 199 (570)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSS--------CSSEEEECCC------------------
T ss_pred HHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEEecchhhhcc--------cCCcceeeec-ccc--------------
Confidence 99999999999999999999999999999999999987654322 1111221111 100
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010535 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (508)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 279 (508)
.............++++++|+|||||||.||||+++|+++.+..... .. ..+..++++++.+|++|..
T Consensus 200 ------~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~-~~-----~~~~~~d~~l~~~p~~~~~ 267 (570)
T 4gr5_A 200 ------SDAPAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLGQ-DY-----AGFGPDEVFLQCSPVSWDA 267 (570)
T ss_dssp ----------CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSSC-CS-----SCCSTTCEEEECSCTTSST
T ss_pred ------ccccccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHhh-hh-----cCCCCCCEEEEecCccHHH
Confidence 00011122334567999999999999999999999999998766542 22 2677899999999999877
Q ss_pred HHHHHHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 280 DQIIETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 280 g~~~~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+...++.+++.|+++++.+ .++..+++.++++++|++.++|+++..|++....
T Consensus 268 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------------------ 323 (570)
T 4gr5_A 268 FGLELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPE------------------------ 323 (570)
T ss_dssp HHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGG------------------------
T ss_pred HHHHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchh------------------------
Confidence 7777888999999999986 3899999999999999999999999998652110
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC---c
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---F 432 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~---~ 432 (508)
++ ++||.+++||+++++++.+++.+.+ ++.+++.||+||++++++...... .
T Consensus 324 ----------------~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~ 379 (570)
T 4gr5_A 324 ----------------AF--------EGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAGDLS 379 (570)
T ss_dssp ----------------GG--------TTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGGGTT
T ss_pred ----------------hC--------CCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeecccccC
Confidence 01 3899999999999999999998877 789999999999988766543322 2
Q ss_pred ccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-C--------CccccCcEEEE
Q 010535 433 NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-D--------GWFHTGDIGEW 503 (508)
Q Consensus 433 ~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-~--------gw~~TGDlg~~ 503 (508)
....++|+|+++++++|+| +++..++.| +.|||+|+|++++.||+++++.+.+.|. + |||+|||+|++
T Consensus 380 ~~~~~iG~p~~~~~v~i~d-~~~~~~~~G--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~ 456 (570)
T 4gr5_A 380 GTALPIGVPLAGKRAYVLD-DDLKPAANG--ALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARR 456 (570)
T ss_dssp SSSCCCBEECTTEEEEEEC-TTSCBCCTT--CEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEE
T ss_pred CCccccceeeCCCEEEEEC-CCCCCCCCC--CcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEE
Confidence 2336799999999999999 888776654 9999999999999999999999999883 2 69999999999
Q ss_pred cCCCC
Q 010535 504 QPMEL 508 (508)
Q Consensus 504 d~~G~ 508 (508)
|+||+
T Consensus 457 d~dG~ 461 (570)
T 4gr5_A 457 RADGV 461 (570)
T ss_dssp CTTSC
T ss_pred CCCCe
Confidence 99995
No 16
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=6.6e-59 Score=477.51 Aligned_cols=385 Identities=22% Similarity=0.327 Sum_probs=311.2
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcC
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G 126 (508)
++|++.++++|+++++... +..+ +++||+||.++++++|++|.++|+++||+|+++++|+++++++++||+++|
T Consensus 4 ~l~~~~a~~~p~~~a~~~~---~~~~---~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 77 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIE---TAAG---DKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAG 77 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEE---ETTC---CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHhCCCCceEEEe---cCCC---cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4788999999999999854 2111 579999999999999999999999999999999999999999999999999
Q ss_pred CEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHHHHHh
Q 010535 127 ITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQ 206 (508)
Q Consensus 127 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (508)
++++||+|.++.+++.++++.++++++|++......+....... . ..++.+..... ..+.+...
T Consensus 78 a~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-------------~~~~~~~~ 141 (503)
T 4fuq_A 78 GVYLPLNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKV-G--ATVETLGPDGR-------------GSLTDAAA 141 (503)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHH-T--CEEEECCTTSC-------------SHHHHHHH
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhc-C--ceEEEecCCcc-------------cccchhhh
Confidence 99999999999999999999999999999976554332222111 0 12333322211 11222222
Q ss_pred cCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHH-HH
Q 010535 207 LGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ET 285 (508)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~ 285 (508)
............++++++|+|||||||.||||.++|+++...+......+ .+..+|++++.+|++|.+|+.. .+
T Consensus 142 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~ 216 (503)
T 4fuq_A 142 GASEAFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYW-----RFTPDDVLIHALPIYHTHGLFVASN 216 (503)
T ss_dssp TSCSCCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCSSSHCCCCCCHH
T ss_pred cCCCCcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEeCChHHHHHHHHHHH
Confidence 22222233355779999999999999999999999999999998887776 7889999999999999999764 67
Q ss_pred HHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCC
Q 010535 286 HCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNK 364 (508)
Q Consensus 286 ~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (508)
.+++.|+++++.+. ++..+++.++ ++|+++++|+++..+++..
T Consensus 217 ~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~---------------------------------- 260 (503)
T 4fuq_A 217 VTLFARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSP---------------------------------- 260 (503)
T ss_dssp HHHHTTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCT----------------------------------
T ss_pred HHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCC----------------------------------
Confidence 88999999988874 9999999998 8999999999999886411
Q ss_pred cchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCC
Q 010535 365 AAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTT 444 (508)
Q Consensus 365 ~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~ 444 (508)
.....++ +++|.+++||+++++++.+.+.+.+|..+++.||+||++..+.. ........+++|+|+|+
T Consensus 261 ---~~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~-~~~~~~~~~~~G~p~~~ 328 (503)
T 4fuq_A 261 ---RLTKETT--------GHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNMNTSN-PYDGDRVPGAVGPALPG 328 (503)
T ss_dssp ---TCSTTTT--------TTCCEEEECSSCCCHHHHHHHHHHHSCCEEECCEETTTEECBCC-CSSSCCCTTEEEEBCTT
T ss_pred ---Cccccch--------hhcEEEEECCCCCCHHHHHHHHHHhCCCccceEcccccCccccc-CCCCCCcCCccccCCCC
Confidence 0111111 38999999999999999999999999999999999999876543 33333445899999999
Q ss_pred eEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 445 VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 445 ~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
++++|+|.+++..++. |+.|||+|+|++++.||+++|+.+.+.| .+|||+|||+|++|+||+
T Consensus 329 ~~~~i~d~~~g~~~~~--g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~ 391 (503)
T 4fuq_A 329 VSARVTDPETGKELPR--GDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGY 391 (503)
T ss_dssp CEEEEECTTTCCBCCT--TCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCE
T ss_pred eEEEEEECCCCCCCcC--CCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCc
Confidence 9999999555655554 5999999999999999999999999999 589999999999999984
No 17
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=3.8e-58 Score=475.49 Aligned_cols=396 Identities=19% Similarity=0.226 Sum_probs=315.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
...+++.++|+++++ +|+++|+++. + +.+||+||.++++++|++|+++|+++||+|+++++|++++++++
T Consensus 21 ~~~~~~~~~l~~~~~-~p~~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~ 90 (529)
T 2v7b_A 21 ALFNFAAYLFRLNET-RAGKTAYIDD---T------GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAF 90 (529)
T ss_dssp -CCCHHHHHHHHTGG-GTTSEEEECS---S------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHH
T ss_pred cceeHHHHHHHhhhc-cCCceEEEeC---C------CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Confidence 345669999999999 9999999864 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCc-cEEEEecCCChhhhHHhhhcCcee
Q 010535 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYL-KTIVSFANVSSSQKKEAEELGVSC 198 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 198 (508)
+||+++|++++|+++.++.+++.++++.++++++|++......+...... .... ..++..+..... ....
T Consensus 91 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~ 161 (529)
T 2v7b_A 91 LGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALES-AEHDGCQLIVSQPRESE--------PRLA 161 (529)
T ss_dssp HHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHC-C---CCEEEEECC--------------CC
T ss_pred HHHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhh-ccccCceEEEecccccc--------cccc
Confidence 99999999999999999999999999999999999998766554333211 1122 344443322110 0012
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHH-HHHHHhhhhhhhhccccCCCCcEEEEecChHH
Q 010535 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAI-VAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (508)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 277 (508)
..++++..............++++++++|||||||.||+|.++|+++ ..........+ .+..+|++++.+|++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~ 236 (529)
T 2v7b_A 162 PLFEELIDAAAPAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPIL-----GIAENDVVFSAAKLFF 236 (529)
T ss_dssp CBHHHHHHTSCCCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCC-----CCCTTCEEEESSCTTS
T ss_pred cchhhhhccCCCcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhcc-----CCCCCcEEEEeecHHH
Confidence 24666655332222334457799999999999999999999999998 55555443333 6788999999999999
Q ss_pred HHHHHH-HHHHHhcCcEEEEec--CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 278 IYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 278 ~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.+++.. .+.++..|+++++.. +++..+++.++++++|+++++|+++..+++...
T Consensus 237 ~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------------- 293 (529)
T 2v7b_A 237 AYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPN----------------------- 293 (529)
T ss_dssp HHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTT-----------------------
T ss_pred HHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcc-----------------------
Confidence 999875 667899999999873 489999999999999999999999988754100
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccc
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~ 434 (508)
.....+ .++|.+++||+++++++.+++++.+|+.+++.||+||++.+++...... ..
T Consensus 294 ----------~~~~~~------------~~lr~~~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~-~~ 350 (529)
T 2v7b_A 294 ----------LPARAD------------VAIRICTSAGEALPREIGERFTAHFGCEILDGIGSTEMLHIFLSNRAGA-VE 350 (529)
T ss_dssp ----------CCCGGG------------CCCCEEEECSSCCCHHHHHHHHHHHSCCEEEEEECTTTSSEEEECCTTC-CC
T ss_pred ----------cccccC------------CceEEEEEcCCCCCHHHHHHHHHHhCCceeeeEchhhcCceeeccccCC-Cc
Confidence 000000 2789999999999999999999989999999999999977666554443 33
Q ss_pred ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 435 ~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
.+++|+|+++++++|+| +++..++.| +.|||+|+|++++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 351 ~~~~G~p~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~~~~G~ 421 (529)
T 2v7b_A 351 YGTTGRPVPGYEIELRD-EAGHAVPDG--EVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCRLPNGC 421 (529)
T ss_dssp TTSCCEECTTCEEEEEC-TTSCBCCTT--SCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSC
T ss_pred cCCcccCCCCCEEEEEC-CCCCCCCCC--CccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEECCCcc
Confidence 48999999999999999 888776654 899999999999999999999999999999999999999999985
No 18
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=2.2e-58 Score=487.46 Aligned_cols=410 Identities=19% Similarity=0.241 Sum_probs=328.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~-~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
.+++.++|+++++++|+++|+++. +...+..+.+||+||.++++++|++|+ ++|+++||+|+++++|++++++++|
T Consensus 81 ~n~~~~~l~~~a~~~pd~~Al~~~---~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~l 157 (663)
T 1ry2_A 81 LNACYNCVDRHALKTPNKKAIIFE---GDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLL 157 (663)
T ss_dssp ECHHHHHTHHHHTTCTTSEEEEEE---CSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHH
T ss_pred ccHHHHHHHHHhccCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 367889999999999999999986 433344578999999999999999999 9999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh---------hHhhcCccCCCCccEEEEecCCChhhhHHh
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCCLYLKTIVSFANVSSSQKKEA 191 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 191 (508)
||+++|++++|+++.++.+++.+++++++++++|+++.... .+.+... ..+.++.+++++.......
T Consensus 158 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~--- 233 (663)
T 1ry2_A 158 AISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALR-ETPGVRHVLVYRKTNNPSV--- 233 (663)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTT-SCTTCCEEEEECSSCCSSC---
T ss_pred HHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHH-hCCCCceEEEEecCCCCcc---
Confidence 99999999999999999999999999999999999876432 1222222 2234566766653211000
Q ss_pred hhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHh-hhhhhhhccccCCCCcEEE
Q 010535 192 EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYF 270 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 270 (508)
.........|+++..............++++++|+|||||||.||||+++|++++..... ....+ .+..+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~ 308 (663)
T 1ry2_A 234 AFHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTF-----DTHQEDVFF 308 (663)
T ss_dssp CCCSSSEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHS-----CCCSSCEEE
T ss_pred ccCCCccccHHHHHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhc-----CCCCCcEEE
Confidence 000112346777765443223344557799999999999999999999999998876643 33334 678999999
Q ss_pred EecChHHHHHHH-HHHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHH
Q 010535 271 SFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (508)
Q Consensus 271 ~~~pl~~~~g~~-~~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (508)
+..|++|..+.. .++.+|+.|+++++.+. ++..+++.|+++++|+++++|++++.|.+..
T Consensus 309 ~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~-------------- 374 (663)
T 1ry2_A 309 TAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAG-------------- 374 (663)
T ss_dssp ECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSC--------------
T ss_pred EcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcC--------------
Confidence 999999999985 57899999999999863 7899999999999999999999999875310
Q ss_pred HHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC---CceeeeccccCCC
Q 010535 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESC 421 (508)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~---~~l~~~YG~TE~~ 421 (508)
....+..++ ++||.+++||+++++++.+++.+.+| +++++.||+||++
T Consensus 375 ---------------------~~~~~~~~l--------~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~ 425 (663)
T 1ry2_A 375 ---------------------DSYIENHSL--------KSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESG 425 (663)
T ss_dssp ---------------------TTSSSSCCC--------TTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTC
T ss_pred ---------------------ccccccCCc--------CceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCcccc
Confidence 000111122 38999999999999999999999887 8999999999998
Q ss_pred cceeeccC--CCcccccccccccCCeEEEEeecC-CCCccCCCCCCCceEEEec--CcccccccCCcccccccc---cCC
Q 010535 422 SGCFTSLA--DVFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDG 493 (508)
Q Consensus 422 ~~~~~~~~--~~~~~~~s~G~p~~~~~~~i~d~~-~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~~~~~~---~~g 493 (508)
+.++.... .....++++|+|++|++++|+| + +|..++. .|+.|||+|+| |+++.||+++++.+.+.| .+|
T Consensus 426 ~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g~~v~~-~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g 503 (663)
T 1ry2_A 426 SHLVTPLAGGVTPMKPGSASFPFFGIDAVVLD-PNTGEELNT-SHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPG 503 (663)
T ss_dssp SCSEECCTTTCCCCCTTCCCEECTTCCEEEEC-SSSTTCEEC-SSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTT
T ss_pred CeeeccCCCCCcccCCCccccCcCCCeEEEEc-CCCCCcCCC-CCcceEEEEecCCCchhcccccChHHHHHhhhcCCCC
Confidence 77766543 2234458999999999999999 6 7766554 25899999999 589999999999887776 379
Q ss_pred ccccCcEEEEcCCCC
Q 010535 494 WFHTGDIGEWQPMEL 508 (508)
Q Consensus 494 w~~TGDlg~~d~~G~ 508 (508)
||+|||+|++|+||+
T Consensus 504 ~y~TGDlg~~d~dG~ 518 (663)
T 1ry2_A 504 YYFTGDGAAKDKDGY 518 (663)
T ss_dssp SEEEEEEEEECTTCC
T ss_pred EEEcCCEEEEcCCCC
Confidence 999999999999995
No 19
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=1.4e-57 Score=479.02 Aligned_cols=393 Identities=17% Similarity=0.218 Sum_probs=325.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|+++++ ||++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|
T Consensus 25 ~~~~l~~~~~~~a~--pd~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~l 93 (617)
T 3rg2_A 25 QDLPLTDILTRHAA--SDSIAVIDG---E------RQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFF 93 (617)
T ss_dssp CCCCTTHHHHTTTT--CCSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHH
T ss_pred CcCCHHHHHHHhhC--CCCeEEecC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHH
Confidence 35789999999988 999999875 3 689999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChh----hHhhcCccCCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
||+++|++++|++|..+.+++.++++.+++++++++..... .............+.+........
T Consensus 94 A~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 162 (617)
T 3rg2_A 94 ALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE----------- 162 (617)
T ss_dssp HHHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCST-----------
T ss_pred HHHhcCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccc-----------
Confidence 99999999999999999999999999999999999986541 111111111233444444433221
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChH
Q 010535 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 276 (508)
..+.+............+..++++++|+|||||||.||||+++|+++...+......+ .+..++++++.+|++
T Consensus 163 --~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~ 235 (617)
T 3rg2_A 163 --HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC-----QFTQQTRYLCAIPAA 235 (617)
T ss_dssp --TBHHHHHHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECSCTT
T ss_pred --cchhhhhcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhc-----CCCCcceEEEeccch
Confidence 1344444443333334456779999999999999999999999999999999888777 788999999999999
Q ss_pred HHHHHHH--HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHH
Q 010535 277 HIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (508)
Q Consensus 277 ~~~g~~~--~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (508)
|.+++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|+++..+++........
T Consensus 236 ~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~----------------- 298 (617)
T 3rg2_A 236 HNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESR----------------- 298 (617)
T ss_dssp SHHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCT-----------------
T ss_pred hhhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhccccc-----------------
Confidence 9999874 7889999999999874 8999999999999999999999999987643321100
Q ss_pred hhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcc
Q 010535 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFN 433 (508)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~ 433 (508)
.++ ++||.+++||+++++++.+++.+.+++.+++.||+||++..++........
T Consensus 299 ------------------~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~ 352 (617)
T 3rg2_A 299 ------------------AQL--------ASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEK 352 (617)
T ss_dssp ------------------TTT--------TTCCEEEEESSCCCHHHHHHHHHHTCSEEEEEEEETTEEEEECCTTSCHHH
T ss_pred ------------------ccC--------CCccEEEEcCCcCCHHHHHHHHHHhCCcEEEEeccCcceeecccCCCcccc
Confidence 001 389999999999999999999999999999999999988655443333233
Q ss_pred ccccccccc-CCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 434 MIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 434 ~~~s~G~p~-~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
...++|+|+ ++++++|+| +++..++.| +.|||+|+|++++.||+++|+.+.+.| .++||+|||+|++|+||+
T Consensus 353 ~~~~~G~p~~~~~~~~i~d-~~~~~~p~G--~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~dG~ 426 (617)
T 3rg2_A 353 IIHTQGYPMCPDDEVWVAD-AEGNPLPQG--EVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGY 426 (617)
T ss_dssp HHHCCCEESCTTCEEEEEC-TTSCBCCTT--CCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTTSC
T ss_pred cccCCCccCCCCceEEEEC-CCCCCCCCC--CceEEEecCccccchhcCChhhhhhccCCCCceecCceEEEcCCce
Confidence 346889997 788999999 888777665 899999999999999999999999999 789999999999999985
No 20
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=1.3e-57 Score=477.63 Aligned_cols=372 Identities=17% Similarity=0.146 Sum_probs=307.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|++++++++|
T Consensus 25 ~~~tl~~~~~~~a~~~Pd~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~l 95 (620)
T 4dg8_A 25 AHPTVVARFSEMAALHPHREAIRDR---F------GSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLL 95 (620)
T ss_dssp GSCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEcC---C------CcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4579999999999999999999875 3 589999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++||+|.++.+++.++++.+++++++++....... ...... .+...
T Consensus 96 ailkaGa~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~--------~~~~~~-~~~~~----------------- 149 (620)
T 4dg8_A 96 AILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPA--------NGLPCV-PVRHL----------------- 149 (620)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCC--------TTSCEE-EGGGC-----------------
T ss_pred HHHHhCCEEEeeCccChHHHHHHHHHhCCCcEEEecCcccccc--------cCCcee-eeccC-----------------
Confidence 9999999999999999999999999999999999765432211 011111 11000
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
. ............++++++|+|||||||.||||+++|+++.+.+.. ...+ .+..++++++.+|++|..+
T Consensus 150 ----~-~~~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~-----~~~~~d~~l~~~p~~~~~~ 218 (620)
T 4dg8_A 150 ----P-AAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFL-----AFAPQMRFLVNSPLSFDAA 218 (620)
T ss_dssp ----C-CCCCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGG-----TTCTTCEEEECSCTTSTHH
T ss_pred ----C-cCCccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhh-----CCCCCCEEEEECccCHHHH
Confidence 0 001111222346789999999999999999999999999887765 3333 6788999999999999999
Q ss_pred HHHHHHHHhcCcEEEEec---CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 281 QIIETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
+..++.+++.|+++++.+ .++..+++.++++++|+++++|++++.+++...
T Consensus 219 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~-------------------------- 272 (620)
T 4dg8_A 219 TLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDP-------------------------- 272 (620)
T ss_dssp HHHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCG--------------------------
T ss_pred HHHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcCh--------------------------
Confidence 988899999999999974 389999999999999999999999998864100
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC---cc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---FN 433 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~---~~ 433 (508)
.++ ++||.+++||+++++++.+.+.+.+ ++.++|.||+||++.+++...... ..
T Consensus 273 --------------~~l--------~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 330 (620)
T 4dg8_A 273 --------------DCL--------GGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEE 330 (620)
T ss_dssp --------------GGG--------TTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGGGGS
T ss_pred --------------hhC--------CCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEeccccccCC
Confidence 001 3899999999999988888877665 889999999999988766543222 23
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccC--------CccccCcEEEEcC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD--------GWFHTGDIGEWQP 505 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~--------gw~~TGDlg~~d~ 505 (508)
...++|+|+++++++|+| +++... +..|+.|||+|+|++++.||+++|+.|.+.|.+ +||+|||+|++|+
T Consensus 331 ~~~~iG~p~~~~~~~i~d-~~~~~~-~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~ 408 (620)
T 4dg8_A 331 DDIPIGKAIAGTAVLLLD-EHGQEI-AEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDE 408 (620)
T ss_dssp SSCCCBEECTTEEEEEEC-TTSCBC-CSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECT
T ss_pred CCCCceecccCcEEEEEC-ccCCCC-CCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECC
Confidence 347899999999999999 777652 224589999999999999999999999999943 7999999999999
Q ss_pred CCC
Q 010535 506 MEL 508 (508)
Q Consensus 506 ~G~ 508 (508)
||+
T Consensus 409 dG~ 411 (620)
T 4dg8_A 409 QGR 411 (620)
T ss_dssp TSC
T ss_pred CCe
Confidence 995
No 21
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=5.5e-57 Score=468.82 Aligned_cols=373 Identities=19% Similarity=0.280 Sum_probs=306.0
Q ss_pred CCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHH
Q 010535 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (508)
Q Consensus 41 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~l 120 (508)
...++.++|.++++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|+++++++++
T Consensus 37 ~~~~l~~~l~~~a~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 107 (563)
T 1amu_A 37 RDKTIHQLFEEQVSKRPNNVAIVCE---N------EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGIL 107 (563)
T ss_dssp TTCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHCCCCeEEEeC---C------ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 3579999999999999999999865 3 589999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeee
Q 010535 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (508)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 200 (508)
||+++|++++||+|.++.+++.++++.++++++|++......+..... ...+..+.....
T Consensus 108 A~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~-----~~~~~~~~~~~~--------------- 167 (563)
T 1amu_A 108 AVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF-----NGQVEIFEEDTI--------------- 167 (563)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCC-----CSEEEECCCSTT---------------
T ss_pred HHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccc-----cCceeeecchhh---------------
Confidence 999999999999999999999999999999999998765544322111 112222221100
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
..........+..++++++|+|||||||.||||+++|+++...+......+ .+..+|++++.+|++|..+
T Consensus 168 -----~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 237 (563)
T 1amu_A 168 -----KIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSL-----NVTEKDRIGQFASISFDAS 237 (563)
T ss_dssp -----TTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTS-----CCCTTCEEEECSCTTSTHH
T ss_pred -----ccccCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHHHH
Confidence 000011112344678999999999999999999999999998887776655 7789999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+..++.+++.|+++++.+. ++..+++.++++++|++.++|+++..+..
T Consensus 238 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~---------------------------- 289 (563)
T 1amu_A 238 VWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDP---------------------------- 289 (563)
T ss_dssp HHHHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCT----------------------------
T ss_pred HHHHHHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHh----------------------------
Confidence 8878889999999998763 88999999999999999999999876521
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC--ccc
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV--FNM 434 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~--~~~ 434 (508)
. . ..++|.+++||+++++++.+++.+ .+.+++.||+||++.+++...... ...
T Consensus 290 ---------~------~--------~~~lr~~~~gG~~l~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 344 (563)
T 1amu_A 290 ---------E------R--------ILSIQTLITAGSATSPSLVNKWKE--KVTYINAYGPTETTICATTWVATKETIGH 344 (563)
T ss_dssp ---------T------T--------CCSCSEEEEESSCCCHHHHHHHTT--TSEEEEEECCGGGSSCSEEEECCSSCCCS
T ss_pred ---------c------c--------cccccEEEEEEecCCHHHHHHHHh--CCeEEEEECcCHHhHhheeeecccccCCC
Confidence 0 0 038999999999999999999987 489999999999987766543322 223
Q ss_pred ccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-------CCccccCcEEEEcCCC
Q 010535 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------DGWFHTGDIGEWQPME 507 (508)
Q Consensus 435 ~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-------~gw~~TGDlg~~d~~G 507 (508)
..++|+|+|+++++|+| +++..++.| +.|||+|+|++++.||+++|+.+.+.|. +|||+|||+|++|+||
T Consensus 345 ~~~vG~p~~~~~v~i~d-~~~~~~~~g--~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~dG 421 (563)
T 1amu_A 345 SVPIGAPIQNTQIYIVD-ENLQLKSVG--EAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDG 421 (563)
T ss_dssp SCCCBEECTTEEEEEEC-TTSCBCCTT--CEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTS
T ss_pred CCcccceeCCCEEEEEC-CCcCCCCCC--CcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcCCC
Confidence 47899999999999999 888766654 8999999999999999999999999883 2499999999999999
Q ss_pred C
Q 010535 508 L 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 422 ~ 422 (563)
T 1amu_A 422 N 422 (563)
T ss_dssp C
T ss_pred e
Confidence 6
No 22
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=2.2e-57 Score=469.06 Aligned_cols=377 Identities=17% Similarity=0.155 Sum_probs=310.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|++.++++|+++|+.+. + +.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 3 ~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 73 (521)
T 3l8c_A 3 LKDMIDSIEQFAQTQADFPVYDCL----G-----ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVA 73 (521)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCcceecC----C-----CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 478999999999999999999875 3 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|++|.++.+++.++++.++++++|++.+....+. .. . ...+
T Consensus 74 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~--------~~-~---------------------~~~~ 123 (521)
T 3l8c_A 74 LTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIE--------GI-S---------------------LVSL 123 (521)
T ss_dssp HHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCT--------TS-E---------------------EEEH
T ss_pred HHHhCCEEEecCccccHHHHHHHHHhCCCCEEEecCccccccc--------cC-c---------------------ccch
Confidence 9999999999999999999999999999999999876432210 11 1 1112
Q ss_pred HHHH---hcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHH
Q 010535 202 EEFL---QLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (508)
Q Consensus 202 ~~~~---~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 278 (508)
.++. .............++++++|+|||||||.||+|.++|+++...+....... ......++++++..|++|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~ 200 (521)
T 3l8c_A 124 SEIESAKLAEMPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDA---AFDVPKQPQMLAQPPYSFD 200 (521)
T ss_dssp HHHHHHHHHTCCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCT---TTCCCSSCEEECCSCTTSG
T ss_pred hhhhhcccccCCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhcc---ccCCCCCCeEEecCCccHH
Confidence 2221 111112223345779999999999999999999999999998877665442 1267788999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHh
Q 010535 279 YDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (508)
Q Consensus 279 ~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (508)
.++...+.++..|+++++.+. ++..+++.++++++|++.++|+++..++...
T Consensus 201 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------ 256 (521)
T 3l8c_A 201 LSVMYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSD------------------------ 256 (521)
T ss_dssp GGHHHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTST------------------------
T ss_pred HHHHHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhh------------------------
Confidence 988888889999999998763 8899999999999999999999998875310
Q ss_pred hhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC--
Q 010535 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV-- 431 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~-- 431 (508)
.....++ +++|.+++||+++++++.+++.+.+ +..+++.||+||+++.++......
T Consensus 257 -------------~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~ 315 (521)
T 3l8c_A 257 -------------DFCQAKM--------PALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREM 315 (521)
T ss_dssp -------------TCSTTTC--------TTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHHH
T ss_pred -------------ccccccC--------ccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeeccccc
Confidence 0000111 3899999999999999999999988 899999999999988766543221
Q ss_pred --cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc----cCCccccCcEEEEcC
Q 010535 432 --FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI----VDGWFHTGDIGEWQP 505 (508)
Q Consensus 432 --~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~----~~gw~~TGDlg~~d~ 505 (508)
....+++|+|+|+++++|+| ++|..++.| +.|||+|+||+++.||+++++.+.+.| .+|||+|||+|++|+
T Consensus 316 ~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~ 392 (521)
T 3l8c_A 316 VDNYTRLPIGYPKPDSPTYIID-EDGKELSSG--EQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTE 392 (521)
T ss_dssp HHHCSSCEEEEECTTSCEEEEC-TTSCBCCTT--CCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECS
T ss_pred ccCCCccccccccCCCEEEEEC-CCcCCCCCC--CceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeC
Confidence 12336899999999999999 888776655 899999999999999999999999988 356999999999999
Q ss_pred CCC
Q 010535 506 MEL 508 (508)
Q Consensus 506 ~G~ 508 (508)
||+
T Consensus 393 dG~ 395 (521)
T 3l8c_A 393 DNI 395 (521)
T ss_dssp SSC
T ss_pred CCe
Confidence 995
No 23
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=3.5e-57 Score=500.03 Aligned_cols=420 Identities=23% Similarity=0.303 Sum_probs=333.0
Q ss_pred CCCcccccccccCCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCC
Q 010535 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (508)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~ 100 (508)
....+|++..+...+ +...|+.++|.++++++|+++|+++. +.. +.+||+||.++++++|++|+++|++
T Consensus 43 ~~~~~~~~~~~~~~~----p~~~tl~~~l~~~a~~~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~L~~~Gv~ 111 (979)
T 3tsy_A 43 NSDVIFRSKLPDIYI----PNHLSLHDYIFQNISEFATKPCLING---PTG----HVYTYSDVHVISRQIAANFHKLGVN 111 (979)
T ss_dssp --CCCBCCSSCCCCC----CTTSCHHHHHTTTGGGTTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCceeecCCCCCCC----CCCCCHHHHHHHHHHhCCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHHHHHcCCC
Confidence 345566665543222 34589999999999999999999875 322 6899999999999999999999999
Q ss_pred CCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEe
Q 010535 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (508)
Q Consensus 101 ~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~ 180 (508)
+||+|+++++|++++++++|||+++|++++||+|.++.+++.++++.++++++|++......+....... . ..++.+
T Consensus 112 ~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~-~~~~~~ 188 (979)
T 3tsy_A 112 QNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD--G-VVIVCI 188 (979)
T ss_dssp TTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTS--C-CEEEEC
T ss_pred CcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcC--C-ceEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987765554432211 1 233444
Q ss_pred cCCChhhhHHhhhcCceeeeHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhh
Q 010535 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (508)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~ 257 (508)
+..... ........++++...... ........++++++|+|||||||.||||+++|++++..+........
T Consensus 189 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~ 262 (979)
T 3tsy_A 189 DDNESV------PIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN 262 (979)
T ss_dssp CCCTTS------CCCTTEEEGGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSS
T ss_pred CCcccc------cCCcccccHHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhc
Confidence 332110 001123445554433211 22333467899999999999999999999999999988776543210
Q ss_pred hccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhh
Q 010535 258 VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (508)
Q Consensus 258 ~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 335 (508)
....+..++++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..+++..
T Consensus 263 -~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----- 336 (979)
T 3tsy_A 263 -PNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSS----- 336 (979)
T ss_dssp -CSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCG-----
T ss_pred -ccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCc-----
Confidence 0125678999999999999999964 6788999999999874 9999999999999999999999999886521
Q ss_pred cCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeee
Q 010535 336 SGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQG 414 (508)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~ 414 (508)
.....++ ++||.+++||+++++++.+++.+.+ ++.+++.
T Consensus 337 --------------------------------~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~ 376 (979)
T 3tsy_A 337 --------------------------------ETEKYDL--------SSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQG 376 (979)
T ss_dssp --------------------------------GGGTSCC--------TTCCEEEESSCCCCSSHHHHHHHHCTTCEEEEC
T ss_pred --------------------------------cccCCCc--------cceEEEEEcCCCCCHHHHHHHHHHCCCCeEEee
Confidence 1111112 3899999999999999999999988 8999999
Q ss_pred ccccCCCcceeeccC----CCcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc
Q 010535 415 YGLTESCSGCFTSLA----DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 490 (508)
Q Consensus 415 YG~TE~~~~~~~~~~----~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~ 490 (508)
||+||++.+++.... ......+++|+|+++++++|+|.+++..++ .|+.|||+|+|++++.||+++|+.+.+.|
T Consensus 377 YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~--~g~~GEl~i~g~~v~~GY~~~p~~t~~~f 454 (979)
T 3tsy_A 377 YGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLS--RNQPGEICIRGHQIMKGYLNNPAATAETI 454 (979)
T ss_dssp EECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCC--TTCCEEEEEESTTSCSEETTCHHHHHHHB
T ss_pred echhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCC--CCCccEEEEECCCccccccCChhhhhhhc
Confidence 999999987665421 122345889999999999999944455554 45899999999999999999999999999
Q ss_pred -cCCccccCcEEEEcCCCC
Q 010535 491 -VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 491 -~~gw~~TGDlg~~d~~G~ 508 (508)
.+|||+|||+|++|+||+
T Consensus 455 ~~~g~~~TGDl~~~~~dG~ 473 (979)
T 3tsy_A 455 DKDGWLHTGDIGLIDDDDE 473 (979)
T ss_dssp CTTSCEEEEEEEEECTTSC
T ss_pred cCCCcEEcCCEEEEcCCce
Confidence 789999999999999985
No 24
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=8e-58 Score=471.15 Aligned_cols=376 Identities=18% Similarity=0.202 Sum_probs=309.2
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~ 122 (508)
.|+.++|+++|+++|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~ 71 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWR---D------AKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGC 71 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCceEEEeC---C------ceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 47899999999999999999875 3 58999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeHH
Q 010535 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (508)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 202 (508)
+++|++++|++|.++.+++.++++.++++++|++....... .. ..++.. ..+.
T Consensus 72 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~--------~~-~~~~~~------------------~~~~ 124 (512)
T 3fce_A 72 VKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSATAVTVTD--------LP-VRIVSE------------------DNLK 124 (512)
T ss_dssp HHTTCCEEEEETTSCHHHHHHHHHHSCCCEEEESSCCCSSC--------CS-SEEEET------------------HHHH
T ss_pred HHhCCEEEeeCCCCcHHHHHHHHHhcCCCEEEecCcccccc--------cc-cceech------------------hhhh
Confidence 99999999999999999999999999999999975432110 00 011110 0112
Q ss_pred HHHhcC--CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 203 EFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 203 ~~~~~~--~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
++.... ..........++++++|+|||||||.||+|.++|+++...+......+ .+..+|++++.+|++|..+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 199 (512)
T 3fce_A 125 DIFFTHKGNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDF-----NLQTGQVFLNQAPFSFDLS 199 (512)
T ss_dssp HHHHHTTTCCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHT-----TCCSSCEEEECSCTTSGGG
T ss_pred hhcccccccCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHhHH
Confidence 222111 112223345679999999999999999999999999999998877776 7889999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+...+.+++.|+++++.+. ++..+++.++++++|++.++|+++..++..
T Consensus 200 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------------------------- 252 (512)
T 3fce_A 200 VMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLME--------------------------- 252 (512)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTS---------------------------
T ss_pred HHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhh---------------------------
Confidence 8888899999999999863 899999999999999999999999887531
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC----
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---- 431 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~---- 431 (508)
......++ +++|.+++||+++++++.+++.+.+ +..+++.||+||+++.++......
T Consensus 253 ----------~~~~~~~~--------~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 314 (512)
T 3fce_A 253 ----------ASFSESML--------PNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLD 314 (512)
T ss_dssp ----------TTCSTTTS--------TTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHHHHH
T ss_pred ----------ccccchhC--------ccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEecccccc
Confidence 00111112 3899999999999999999999988 889999999999988776544322
Q ss_pred cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc----CCccccCcEEEEcCCC
Q 010535 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV----DGWFHTGDIGEWQPME 507 (508)
Q Consensus 432 ~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~----~gw~~TGDlg~~d~~G 507 (508)
.....++|+|+++++++|+| +++..++.| +.|||+|+||+++.||+++++.+.+.|. +|||+|||+|++ +||
T Consensus 315 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~dG 390 (512)
T 3fce_A 315 QYKSLPVGYCKSDCRLLIMK-EDGTIAPDG--EKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYV-ENG 390 (512)
T ss_dssp HCSSCCCEEECTTCEEEEEC-SSSCBCCTT--SCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEE-ETT
T ss_pred ccCCCccccccCCcEEEEEC-CCCCCCCCC--CeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEe-cCC
Confidence 12336899999999999999 888776655 8999999999999999999999999883 569999999999 677
Q ss_pred C
Q 010535 508 L 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 391 ~ 391 (512)
T 3fce_A 391 L 391 (512)
T ss_dssp E
T ss_pred E
Confidence 4
No 25
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4.2e-57 Score=465.45 Aligned_cols=375 Identities=19% Similarity=0.241 Sum_probs=312.9
Q ss_pred CCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 43 ~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~-gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
.|+.++|+++|+++|+++|+++. + +++||+||.++++++|.+|.+. |+++|++|+++++|+++++++++|
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA 71 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQ---G------QSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLG 71 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCeEEEcC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHH
Confidence 47899999999999999999875 3 6899999999999999999885 889999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|++++|++|.++.+++.++++.++++++|++....... .. . ......+
T Consensus 72 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~---~~---~----------------------~~~~~~~ 123 (511)
T 3e7w_A 72 SVKAGHPYIPVDLSIPSERIAKIIESSGAELLIHAAGLSIDA---VG---Q----------------------QIQTVSA 123 (511)
T ss_dssp HHHHTCCEEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTC---CC---C----------------------SSCEEEH
T ss_pred HHHhCCEEEecCCCChHHHHHHHHHhCCCCEEEecccccchh---cc---c----------------------ccceecH
Confidence 999999999999999999999999999999999976432111 00 0 0112344
Q ss_pred HHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010535 202 EEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (508)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 280 (508)
+++.... ..........++++++|+|||||||.||+|.++|+++...+......+ .+..++++++.+|++|..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 198 (511)
T 3e7w_A 124 EELLENEGGSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADF-----PVSGGKIFLNQAPFSFDLS 198 (511)
T ss_dssp HHHHTSCSCCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHS-----TTTTTCEEEECSCTTSTHH
T ss_pred hhhhccccCCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCccceEEEeCCccHHHH
Confidence 5554433 112222345678999999999999999999999999999998877766 7789999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 281 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
+...+.+++.|+++++.+. ++..+++.++++++|+++++|++++.++..
T Consensus 199 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------------------------- 251 (511)
T 3e7w_A 199 VMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMD--------------------------- 251 (511)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTS---------------------------
T ss_pred HHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhc---------------------------
Confidence 8888899999999998863 889999999999999999999999987541
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc-CCceeeeccccCCCcceeeccCCC----
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---- 431 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~---- 431 (508)
+.....++ +++|.+++||+++++++.+++.+.+ +..+++.||+||+++.++......
T Consensus 252 ----------~~~~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 313 (511)
T 3e7w_A 252 ----------PGFSQDLL--------PHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITNDVIS 313 (511)
T ss_dssp ----------TTCSTTTC--------TTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECHHHHT
T ss_pred ----------cccccccC--------CcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccccccc
Confidence 00111111 3899999999999999999999998 899999999999988766543221
Q ss_pred cccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccc--cCC--ccccCcEEEEcCCC
Q 010535 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDG--WFHTGDIGEWQPME 507 (508)
Q Consensus 432 ~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~--~~g--w~~TGDlg~~d~~G 507 (508)
.....++|+|+|+++++|+| ++|..++.| +.|||+|+|++++.||+++++.+.+.| .+| ||+|||+|+++ ||
T Consensus 314 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~~-dG 389 (511)
T 3e7w_A 314 RSESLPVGFAKPDMNIFIMD-EEGQPLPEG--EKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFIQ-DG 389 (511)
T ss_dssp TCSSCCCBEECTTCEEEEEC-TTSCBCCTT--CCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEEE-TT
T ss_pred cCCcCCCcceeCCCEEEEEC-CCCCCCCCC--CceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEcc-CC
Confidence 12336799999999999999 888766654 899999999999999999999999998 344 89999999994 77
Q ss_pred C
Q 010535 508 L 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 390 ~ 390 (511)
T 3e7w_A 390 Q 390 (511)
T ss_dssp E
T ss_pred e
Confidence 4
No 26
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=6.9e-56 Score=461.98 Aligned_cols=392 Identities=18% Similarity=0.174 Sum_probs=311.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCC----CCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDG----KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~----~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~ 115 (508)
....|+.++|+++|+++|+++|+++. ++ .....+.+||+||.++++++|++|.+.|+ +||+|+++++|++++
T Consensus 17 ~~~~tl~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~ 92 (562)
T 3ite_A 17 TSTVPPSHYIETWAKTHPEWKAVEVA---TGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIA 92 (562)
T ss_dssp -CCCCTTHHHHHHHHHCTTSEEEEEE---ECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHH
T ss_pred cccCCHHHHHHHHHHHCCCchhhhcc---cccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHH
Confidence 45688999999999999999999876 32 12234789999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcC
Q 010535 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (508)
Q Consensus 116 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (508)
+++++||+++|++++||+|.++.+++.++++.++++++|+++.....+. ......++... .
T Consensus 93 ~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~--~----------- 153 (562)
T 3ite_A 93 FAIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVE------LPPETKVLDTK--N----------- 153 (562)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCC------CCTTCEEEETT--C-----------
T ss_pred HHHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEccccccccc------cCccceeeccc--c-----------
Confidence 9999999999999999999999999999999999999999876443220 01111222111 0
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhh---hccccCCCCcEEEEe
Q 010535 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV---VTGKVCSEEDTYFSF 272 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 272 (508)
..+.+...............++++++|+|||||||.||||+++|+++...+..+...+. .....+...+++++.
T Consensus 154 ---~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (562)
T 3ite_A 154 ---QSFIENLSTQDTSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCL 230 (562)
T ss_dssp ---HHHHHHHHHSCCSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECC
T ss_pred ---hhhhhhcccccccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEe
Confidence 12222222222222233456788999999999999999999999999988877655432 111356788999999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHH
Q 010535 273 LPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (508)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (508)
.|++|..++..++.++..|+++++.+. .+..+++.++++++|+++++|++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~---------------------- 288 (562)
T 3ite_A 231 ASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGL---------------------- 288 (562)
T ss_dssp SCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTC----------------------
T ss_pred cCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhccc----------------------
Confidence 999998888878889999999988764 46789999999999999999998876521
Q ss_pred HHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCC
Q 010535 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD 430 (508)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~ 430 (508)
.+ .++ ++||.+++||+++++++.+++++.+++.+++.||+||+++.++.....
T Consensus 289 ---------------~~----~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~ 341 (562)
T 3ite_A 289 ---------------VP----EDA--------PHLVYLGVGGEKMTPRTQQIWSSSDRVALVNVYGPTEVTIGCSAGRIL 341 (562)
T ss_dssp ---------------CG----GGS--------TTCCEEEEESSCCCHHHHHHHTTCSSCEEEEEECCGGGCSCSEEEECC
T ss_pred ---------------Cc----ccc--------CceEEEEEecCCCCHHHHHHHhhCCCcEEEEeeccchheeeeeeeeec
Confidence 00 011 389999999999999999999998899999999999998877766554
Q ss_pred CcccccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCC--ccccCcEEEEcCCCC
Q 010535 431 VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDG--WFHTGDIGEWQPMEL 508 (508)
Q Consensus 431 ~~~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~g--w~~TGDlg~~d~~G~ 508 (508)
.....+++|+|+++++++|+| ++++ .++..|+.|||+|+|+.++.||+++|+.+...+.+| ||+|||+|++|+||+
T Consensus 342 ~~~~~~~~G~p~~~~~~~i~d-~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d~dG~ 419 (562)
T 3ite_A 342 PDSDTRCIGHPLGDSVAHVLA-PGSN-EHVKKGMAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMDADSS 419 (562)
T ss_dssp TTSCTTEEEEECTTCEEEEEC-TTSS-CBCCTTSCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEEEEECTTSC
T ss_pred CCCCCccccccCCCCeEEEEe-CCCC-CCCCCCCceEEEEeccccchhhCCCccccccccCCCCEEEecCCEEEEcCCCe
Confidence 444458999999999999999 5443 223355999999999999999999999988777777 999999999999996
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=7.1e-57 Score=472.67 Aligned_cols=392 Identities=19% Similarity=0.223 Sum_probs=312.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~ 119 (508)
....++.++|+++|+++|+++|+++. ++ +..+.+||+||.++++++|++|.++|+++||+|+++++|++++++++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~---~~--~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 82 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFL---NK--ELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAF 82 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEE---ET--TEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEE---cC--CeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Confidence 35689999999999999999999886 42 23378999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEeccCCC---CHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCc
Q 010535 120 EACNSQAITYVPLYDTL---GANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (508)
Q Consensus 120 lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (508)
|||+++|++++||+|.. +.+++.++++.+++++++++......+.............+..+.
T Consensus 83 lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 147 (590)
T 3kxw_A 83 LGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAIA--------------- 147 (590)
T ss_dssp HHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEEEEE---------------
T ss_pred HHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccccccceee---------------
Confidence 99999999999999988 457899999999999999987655544322211111111111111
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChH
Q 010535 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 276 (508)
.+.+..............++++++|+|||||||.||||+++|++++..+......+ .+..++++++.+|++
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~ 218 (590)
T 3kxw_A 148 ----LESIELNRSSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSF-----HMNDETIIFSWLPPH 218 (590)
T ss_dssp ----GGGCCGGGGGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTT
T ss_pred ----chhccccccccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhh-----CCCCcCeEEEecCCC
Confidence 11110000111223345778999999999999999999999999999999987776 788999999999999
Q ss_pred HHHHHHH-HHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHH
Q 010535 277 HIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (508)
Q Consensus 277 ~~~g~~~-~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (508)
|.+|+.. ++.+++.|+++++.+. ++..+++.++++++|++.++|.++..+++.+..
T Consensus 219 h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------ 280 (590)
T 3kxw_A 219 HDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIRE------------------ 280 (590)
T ss_dssp SHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCG------------------
T ss_pred cchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhh------------------
Confidence 9999985 7889999999999863 789999999999999999999999988653211
Q ss_pred HHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC------CceeeeccccCCCcce
Q 010535 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGLTESCSGC 424 (508)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~------~~l~~~YG~TE~~~~~ 424 (508)
......++ ++||.+++||+++++++.+++.+.++ ..+++.||+||+++++
T Consensus 281 ----------------~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~ 336 (590)
T 3kxw_A 281 ----------------EKKEGLDL--------SSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLV 336 (590)
T ss_dssp ----------------GGGTTCCC--------TTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEE
T ss_pred ----------------hhccCCCc--------hhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCcccccccccccccccee
Confidence 11111122 38999999999999999999999873 4799999999999887
Q ss_pred eeccCC--------------------------CcccccccccccCCeEEEEeecCC-CCccCCCCCCCceEEEecCcccc
Q 010535 425 FTSLAD--------------------------VFNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFS 477 (508)
Q Consensus 425 ~~~~~~--------------------------~~~~~~s~G~p~~~~~~~i~d~~~-~~~~~~~~~~~GEl~v~g~~v~~ 477 (508)
+..... ......++|+|+++ ++|+| ++ +..++ .|+.|||+|+||+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d-~~~~~~~~--~g~~GEl~v~g~~v~~ 411 (590)
T 3kxw_A 337 TGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIID-PDTLIPCD--FDQVGEIWVQSNSVAK 411 (590)
T ss_dssp EECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEEC-TTTCCBCC--TTBCEEEEEESTTSCC
T ss_pred ecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEc-CCCCcCCC--CCCEEEEEEeCCcccc
Confidence 754321 11233688999998 88898 55 54444 5589999999999999
Q ss_pred cccCCcccccccccC-------C--ccccCcEEEEcCCCC
Q 010535 478 GYYKRPDLTEEVIVD-------G--WFHTGDIGEWQPMEL 508 (508)
Q Consensus 478 gY~~~~~~~~~~~~~-------g--w~~TGDlg~~d~~G~ 508 (508)
||+++|+.+.+.|.+ | ||+|||+|++| ||+
T Consensus 412 GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~ 450 (590)
T 3kxw_A 412 GYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLH-ENE 450 (590)
T ss_dssp CBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEE-TTE
T ss_pred cccCChhHHHHHHhccccCCCCCCcEEecCcEEEEE-CCE
Confidence 999999999999843 5 99999999999 774
No 28
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.2e-56 Score=459.29 Aligned_cols=385 Identities=21% Similarity=0.295 Sum_probs=303.2
Q ss_pred CHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHH
Q 010535 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (508)
Q Consensus 44 t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~ 123 (508)
|+.++|+++++++|+++|+++. + +++||+||.++++++|.+|++. +||+|+++++|+++++++++||+
T Consensus 2 tl~~~l~~~a~~~pd~~Al~~~---~------~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~ 69 (501)
T 3ipl_A 2 SLDFWLYKQAQQNGHHIAITDG---Q------ESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACW 69 (501)
T ss_dssp -CCCHHHHHHHHHTTSEEEECS---S------CEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCceEEEeC---C------cEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHH
Confidence 5678999999999999999875 3 5799999999999999999987 89999999999999999999999
Q ss_pred hcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCcee-eeHH
Q 010535 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC-FSWE 202 (508)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 202 (508)
++|++++|+++.++.+++.++++.++++++|++............. ..+..+.......... ........ ...+
T Consensus 70 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 144 (501)
T 3ipl_A 70 LANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSL--DDIEFAGRDITTNGLL---DNTMGIQYDTSNE 144 (501)
T ss_dssp HTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEET--TC------------------------------
T ss_pred HcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcccccccccccccc--ccceeeeeeccccccc---ccccccccccchh
Confidence 9999999999999999999999999999999998755433211110 1111111000000000 00000000 0001
Q ss_pred HHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 203 EFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 203 ~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
...... ..........++++++|+|||||||.||+|.++|+++...+......+ .+..++++++.+|++|.+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 219 (501)
T 3ipl_A 145 TVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESL-----GFDRDTNWLSVLPIYHISGL 219 (501)
T ss_dssp -----CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHT-----CCCTTCEEEECSCTTSHHHH
T ss_pred hccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhh-----CCCccCEEEEeCcHHHHHHH
Confidence 111100 001122345679999999999999999999999999999998887776 78899999999999999999
Q ss_pred HHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCC
Q 010535 282 IIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM 360 (508)
Q Consensus 282 ~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (508)
...+.+++.|+++++.+. ++..+++.++++++|+++++|++++.|++....
T Consensus 220 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------------- 271 (501)
T 3ipl_A 220 SVLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLH---------------------------- 271 (501)
T ss_dssp HHHHHHHHHTCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCC----------------------------
T ss_pred HHHHHHHHcCceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCC----------------------------
Confidence 888899999999999875 999999999999999999999999998652100
Q ss_pred CCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCC-cccccccc
Q 010535 361 PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FNMIGTVG 439 (508)
Q Consensus 361 ~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~s~G 439 (508)
. ..+||.+++||+++++++.+++.+ +++++++.||+||+++.+....... ....+++|
T Consensus 272 -----~---------------~~~lr~i~~gG~~l~~~~~~~~~~-~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G 330 (501)
T 3ipl_A 272 -----E---------------PYNLQKILLGGAKLSATMIETALQ-YNLPIYNSFGMTETCSQFLTATPEMLHARPDTVG 330 (501)
T ss_dssp -----S---------------CTTCCEEEECSSCCCHHHHHHHHH-TTCCEEEEEEEGGGTEEEEEECHHHHHHCTTCCB
T ss_pred -----C---------------cCcccEEEEeCCCCCHHHHHHHHH-hCCCEeccccccccccceeecCccccccCCCCCC
Confidence 0 026899999999999999999988 4999999999999987665544332 33447899
Q ss_pred cccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 440 VPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 440 ~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
+|+++++++|+| ++ .++.|||+|+|+.++.||+++++.+.+ |.+|||+|||+|++|+||+
T Consensus 331 ~p~~~~~~~i~d-~~-------~~~~GEl~v~g~~~~~gY~~~~~~t~~-~~~g~~~TGDl~~~~~~G~ 390 (501)
T 3ipl_A 331 MPSANVDVKIKN-PN-------KEGHGELMIKGANVMNGYLYPTDLTGT-FENGYFNTGDIAEIDHEGY 390 (501)
T ss_dssp EECTTCEEEEES-CC-------SSCCEEEEEESTTSCSCCSBSTTCCCS-EETTEEEEEEEEEECTTSC
T ss_pred CCCCCcEEEEec-CC-------CCCccEEEEeccchhhhhCcChhhcch-hcCCceecCCEEEEcCCCe
Confidence 999999999999 44 236899999999999999999999887 8899999999999999985
No 29
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=5.9e-56 Score=464.60 Aligned_cols=397 Identities=19% Similarity=0.223 Sum_probs=317.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc
Q 010535 33 DGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC 112 (508)
Q Consensus 33 ~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~ 112 (508)
+.++...+...++.++|+++++++|+.+++.+. ....+++||+||.++++++|++|.++|+++||+|+++++|+
T Consensus 11 ~~~~~~~~~~~tl~~~l~~~a~~~p~~~~~~~~------~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~ 84 (576)
T 3gqw_A 11 HSLPMRYADFPTLVDALDYAALSSAGMNFYDRR------CQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETS 84 (576)
T ss_dssp ---CCCCSCCSSHHHHHHHHTTSSCEEEEECTT------SCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSS
T ss_pred CCCCcccCCCCcHHHHHHHHhhCCCCeEEeCCC------CCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc
Confidence 344455567889999999999999998887432 22337899999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhcCCEEEeccCCCC-------HHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCCh
Q 010535 113 PEWIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSS 185 (508)
Q Consensus 113 ~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 185 (508)
++++++++||+++|++++|+++.++ .+++.++++.++++++|++.+....+....... ... .+
T Consensus 85 ~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~-~~-------- 154 (576)
T 3gqw_A 85 SEFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDN-PEL-HV-------- 154 (576)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGC-TTC-EE--------
T ss_pred HHHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccC-Ccc-ee--------
Confidence 9999999999999999999999999 799999999999999999987666554332211 111 11
Q ss_pred hhhHHhhhcCceeeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCC
Q 010535 186 SQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSE 265 (508)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~ 265 (508)
....................++++++|+|||||||.||||.++|+++...+....... ..+..
T Consensus 155 -------------~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~----~~~~~ 217 (576)
T 3gqw_A 155 -------------LSHAWFKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDG----IKLRP 217 (576)
T ss_dssp -------------EEHHHHHTSCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTT----SCCCT
T ss_pred -------------cchhhhhcccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcc----cCCCC
Confidence 1111111111222233345679999999999999999999999999998887765431 27789
Q ss_pred CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCCh
Q 010535 266 EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (508)
Q Consensus 266 ~~~~l~~~pl~~~~g~~~-~~~~l~~G~~~v~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (508)
+|++++.+|++|.+|+.. .+.++..|+++++.+. ++..+++.++++++|+++++|.+++.+.+.+.
T Consensus 218 ~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-------- 289 (576)
T 3gqw_A 218 GDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVN-------- 289 (576)
T ss_dssp TCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCC--------
T ss_pred cceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhc--------
Confidence 999999999999999875 6678899999988762 88999999999999999999999987754211
Q ss_pred hHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhc------CCceee
Q 010535 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS------GAPLTQ 413 (508)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~------~~~l~~ 413 (508)
.......++ +++|.+++||+++++++.+++.+.+ +..+++
T Consensus 290 --------------------------~~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 335 (576)
T 3gqw_A 290 --------------------------EKDLAELDL--------SCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMP 335 (576)
T ss_dssp --------------------------HHHHTTCCC--------TTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEE
T ss_pred --------------------------ccccccCCh--------hhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccc
Confidence 111111112 3899999999999999999999987 678999
Q ss_pred eccccCCCcceeeccCCCc---------------------------ccccccccccCCeEEEEeecCCCCccCCCCCCCc
Q 010535 414 GYGLTESCSGCFTSLADVF---------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 466 (508)
Q Consensus 414 ~YG~TE~~~~~~~~~~~~~---------------------------~~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~G 466 (508)
.||+||++++++....... ....++|+|+|+++++|+| +++..++.| +.|
T Consensus 336 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g--~~G 412 (576)
T 3gqw_A 336 CYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRN-EAGMPVAER--VVG 412 (576)
T ss_dssp EEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEEC-TTSCBCCTT--BCE
T ss_pred cCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEEC-CCCCCCCCC--CeE
Confidence 9999999988775432210 0113799999999999999 888777655 899
Q ss_pred eEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 467 EICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 467 El~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
||+|+|+.++.||+++++.+.+.+.+|||+|||+|++ +||+
T Consensus 413 El~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~-~dG~ 453 (576)
T 3gqw_A 413 HICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYL-LDGY 453 (576)
T ss_dssp EEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEEEEE-ETTE
T ss_pred EEEEeCccccccccCCccccccccCCCeeeccceEEE-ECCE
Confidence 9999999999999999998888789999999999999 6774
No 30
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=8.7e-57 Score=461.76 Aligned_cols=374 Identities=25% Similarity=0.350 Sum_probs=300.8
Q ss_pred CCCCCHHHHHHHHHHhCCC-CcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHH
Q 010535 40 AGLESPWQFFCDSAKRIPN-NQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (508)
Q Consensus 40 ~~~~t~~~~l~~~a~~~p~-~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~ 118 (508)
..+.++.+.|.++++++|+ ++|+++. + +.+||+||.++++++|.+|. .|++|+++++|+++++++
T Consensus 19 ~~~~tl~~~l~~~a~~~p~d~~Al~~~---~------~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~ 84 (505)
T 3nyq_A 19 SHMSSLFPALSPAPTGAPADRPALRFG---E------RSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVA 84 (505)
T ss_dssp -----CCTTTSSCCCSGGGGSEEEEET---T------EEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHH
T ss_pred cccchhHHHHHHHHHhCCCCCeEEEEC---C------eeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHH
Confidence 4568899999999999987 9999875 3 68999999999999998774 488999999999999999
Q ss_pred HHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCcee
Q 010535 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (508)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 198 (508)
++||+++|++++||+|.++.+++.++++.++++++|++..... ......+..+ .++..
T Consensus 85 ~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~------~~~~~~~~~~-~~~~~--------------- 142 (505)
T 3nyq_A 85 VVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAEL------PPALGALERV-DVDVR--------------- 142 (505)
T ss_dssp HHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCC------CGGGTTSEEE-ECCTT---------------
T ss_pred HHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCcccc------chhhcccccc-ccccc---------------
Confidence 9999999999999999999999999999999999999865211 0001111111 11100
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHH
Q 010535 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (508)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 278 (508)
...........++++++|+|||||||.||||+++|+++...+......+ .+..+|++++.+|++|.
T Consensus 143 ---------~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~ 208 (505)
T 3nyq_A 143 ---------ARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW-----QWTGEDVLVQGLPLFHV 208 (505)
T ss_dssp ---------CCCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECCCTTSH
T ss_pred ---------cccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh-----CCCCCcEEEEeccHHHH
Confidence 0011223345678999999999999999999999999999999888777 78899999999999999
Q ss_pred HHHHH-HHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 279 YDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 279 ~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
.|+.. ++.++..|+++++.+. ++..+++.+ ++++|+++++|+++..+++.+..
T Consensus 209 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~------------------------ 263 (505)
T 3nyq_A 209 HGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPA------------------------ 263 (505)
T ss_dssp HHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGG------------------------
T ss_pred HHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhc------------------------
Confidence 99874 7889999999998874 899999999 88999999999999998753211
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCccccc
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIG 436 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~ 436 (508)
.+ ....+++ ++|.+++||+++++++.+++.+.++..+++.||+||+++.++...... ...+
T Consensus 264 ---------~~-~~~~~l~--------~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~ 324 (505)
T 3nyq_A 264 ---------DP-ELAKALA--------GARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTSVRADGE-PRAG 324 (505)
T ss_dssp ---------CH-HHHHHHH--------HCSEEEECSSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECCTTSC-CCTT
T ss_pred ---------Cc-hhhcccc--------cceEEEECCCCCCHHHHHHHHHhcCCeeecccchhhcccccccCCCCC-CCCC
Confidence 00 1112233 789999999999999999999999999999999999987666544433 3448
Q ss_pred ccccccCCeEEEEeecCCCCccCC-CCCCCceEEEecCcccccccCCcccccccc-cCCccccCcEEEEcCCCC
Q 010535 437 TVGVPMTTVEARLESVPEMGYDAL-SSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 437 s~G~p~~~~~~~i~d~~~~~~~~~-~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~-~~gw~~TGDlg~~d~~G~ 508 (508)
++|+|+++++++|+| +++..++. ..|+.|||+|+|++++.||+++|+.+.+.| .+|||+|||+|++|+||+
T Consensus 325 ~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~ 397 (505)
T 3nyq_A 325 TVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGY 397 (505)
T ss_dssp CCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSC
T ss_pred CcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCCcc
Confidence 999999999999999 88877665 335899999999999999999999999999 699999999999999985
No 31
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=2.5e-53 Score=480.59 Aligned_cols=376 Identities=18% Similarity=0.264 Sum_probs=311.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHH
Q 010535 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (508)
Q Consensus 42 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA 121 (508)
..++.++|+++++++|+++|+++. + +.+||+||.++++++|++|.+.|+++|++|+|+++|++++++++||
T Consensus 463 ~~~l~~~~~~~~~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 533 (1304)
T 2vsq_A 463 TKPLTYWFKEAVNANPDAPALTYS---G------QTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILG 533 (1304)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEESS---S------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEC---C------eeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHH
Confidence 478999999999999999999875 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCChhhhHHhhhcCceeeeH
Q 010535 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (508)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 201 (508)
|+++|+++|||+|.++.+++.++++.+++++++++......+.. .......+.+++...
T Consensus 534 ilkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-----~~~~~~~~~~~~~~~---------------- 592 (1304)
T 2vsq_A 534 VLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAE-----LPYTGTTLFIDDQTR---------------- 592 (1304)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTT-----CCCCSEEEESSCGGG----------------
T ss_pred HHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhc-----cCCCCcEEEeccccc----------------
Confidence 99999999999999999999999999999999998765433211 111122333321100
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010535 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (508)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 281 (508)
. . ...........++++++|+|||||||.||||+++|+++.+. ......+ .+..++++++..|++|..+.
T Consensus 593 --~-~-~~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 662 (1304)
T 2vsq_A 593 --F-E-EQASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYM-----AFSDQDTFLSVSNYAFDAFT 662 (1304)
T ss_dssp --G-G-SCSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSS-----CCCTTCEEEECSCTTSTHHH
T ss_pred --c-c-cccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhc-----CCCCCCEEEEECCccHHHHH
Confidence 0 0 01111223456789999999999999999999999999866 3333333 67889999999999998888
Q ss_pred HHHHHHHhcCcEEEEecC----CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhc
Q 010535 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (508)
Q Consensus 282 ~~~~~~l~~G~~~v~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (508)
..++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+.+..
T Consensus 663 ~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~--------------------------- 715 (1304)
T 2vsq_A 663 FDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG--------------------------- 715 (1304)
T ss_dssp HHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---------------------------
T ss_pred HHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---------------------------
Confidence 888999999999999863 8899999999999999999999999885410
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcC-CceeeeccccCCCcceeeccCCC---cc
Q 010535 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADV---FN 433 (508)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~---~~ 433 (508)
. ..++ +||.+++||+++++++.+.+.+.++ ..++|.||+||+++.++...... ..
T Consensus 716 -----------~--~~~~--------~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 774 (1304)
T 2vsq_A 716 -----------E--DWMK--------GLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSI 774 (1304)
T ss_dssp -----------S--HHHH--------TCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSC
T ss_pred -----------h--hcCC--------CccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccC
Confidence 0 0122 7999999999999999999988774 78999999999998776543322 22
Q ss_pred cccccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCccccccccc-------CCccccCcEEEEcCC
Q 010535 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------DGWFHTGDIGEWQPM 506 (508)
Q Consensus 434 ~~~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~-------~gw~~TGDlg~~d~~ 506 (508)
...++|+|+++++++|+| +++..+|.| +.|||+|+|+++++||+++|+.|.+.|. ++||+|||+|++++|
T Consensus 775 ~~~~iG~p~~~~~~~i~d-~~~~~~p~G--~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~d 851 (1304)
T 2vsq_A 775 SSLPIGKPISNASVYILN-EQSQLQPFG--AVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPD 851 (1304)
T ss_dssp SSCCCBEECTTEEEEEEC-TTSCBCCTT--CCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTT
T ss_pred CCCCCceeeCCCEEEEEC-CCcCCCCCC--CceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcCC
Confidence 336899999999999999 888777665 8999999999999999999999999982 349999999999999
Q ss_pred CC
Q 010535 507 EL 508 (508)
Q Consensus 507 G~ 508 (508)
|+
T Consensus 852 G~ 853 (1304)
T 2vsq_A 852 GT 853 (1304)
T ss_dssp SC
T ss_pred Ce
Confidence 95
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=2.8e-34 Score=280.72 Aligned_cols=207 Identities=17% Similarity=0.187 Sum_probs=175.3
Q ss_pred CCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC
Q 010535 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG 299 (508)
Q Consensus 220 ~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~ 299 (508)
+++++|+|||||||.||||++||+++.+.+......+ .+.++|++++++|++|.+|+..++.+++.|+++++...
T Consensus 37 d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~ 111 (358)
T 4gs5_A 37 GAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKAL-----SLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEP 111 (358)
T ss_dssp TCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCc
Confidence 6789999999999999999999999999999888777 78899999999999999999888889999999998864
Q ss_pred CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHHHHHHHH
Q 010535 300 DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIRE 379 (508)
Q Consensus 300 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 379 (508)
....++.++++++|++.++|++++.+++... ...++
T Consensus 112 -~~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~--------------------------------------~~~~l----- 147 (358)
T 4gs5_A 112 -TANPLAGLDHADFDFVAMVPMQLQSILENSA--------------------------------------TSGQV----- 147 (358)
T ss_dssp -CSCTTTTCSSCCCSEEEECHHHHHHHHHCTT--------------------------------------TGGGG-----
T ss_pred -cccHHHHHHHhCCeEEEcChHHHHHhhcccc--------------------------------------ccccC-----
Confidence 2344678999999999999999999865210 00112
Q ss_pred HhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeecCCCCccC
Q 010535 380 AFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDA 459 (508)
Q Consensus 380 ~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~~~~~~~~ 459 (508)
++||.+++||+++++++.+++++. ++++++.||+||+++.++....+.... +++|.+.|++++.+.+
T Consensus 148 ---~~lr~v~~gG~~l~~~~~~~~~~~-~~~~~~~YG~TEt~~~~~~~~~~~~~~-g~~~~~~pgv~~~~~~-------- 214 (358)
T 4gs5_A 148 ---DRLGKVLLGGAPVNHALAMQISDL-AMPVYQSYGMTETVSHVALKALNGPEA-SELYVFLPGIQYGVDE-------- 214 (358)
T ss_dssp ---GGGCSEEECSSCCCHHHHHHHHTC-SSCEEEEEECGGGSSEEEEEECSSTTC-CSCEEECTTCEEEECT--------
T ss_pred ---CcceEEEEcccCCCchheeccccc-CceEEeccccccccceeeccccccccc-ceeeccCCCeEEEecC--------
Confidence 289999999999999999999874 999999999999998877766554433 8899999999888754
Q ss_pred CCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCCC
Q 010535 460 LSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 508 (508)
Q Consensus 460 ~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G~ 508 (508)
.|||+++|+.+ .+|||+|||+|++|+||+
T Consensus 215 -----~Gel~~~g~~~---------------~~g~~~TGDlg~~d~~g~ 243 (358)
T 4gs5_A 215 -----RGCLHISGAVT---------------NGQTVQTNDLVEIHGNAF 243 (358)
T ss_dssp -----TSEEEEESGGG---------------TTCCEEEEEEEEECSSEE
T ss_pred -----cCceEEecccc---------------cCcceecCCccccccCce
Confidence 69999998642 378999999999999874
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=5e-32 Score=273.04 Aligned_cols=230 Identities=14% Similarity=0.087 Sum_probs=182.1
Q ss_pred CCCC-CCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcE
Q 010535 216 PKKK-TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCS 293 (508)
Q Consensus 216 ~~~~-~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~~l~~G~~ 293 (508)
...+ +++++++|||||||.||+|.++|+++...+..+...+.. .++..+|++++.+|+.|..+.. ..+.++..|++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~ 158 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYM--VGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCL 158 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHH--TTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHH--cCCCCCCEEEECcccccchhHHHHHHHHHHcCCE
Confidence 3455 889999999999999999999999998877666443322 2678899999999987655554 57788999999
Q ss_pred EEEec-CCHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHH
Q 010535 294 IGFWR-GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSL 372 (508)
Q Consensus 294 ~v~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (508)
+++.+ +++..+++.++++++|+++++|+++..|++.+........
T Consensus 159 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~---------------------------------- 204 (436)
T 3qov_A 159 TVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPR---------------------------------- 204 (436)
T ss_dssp EECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTT----------------------------------
T ss_pred EEeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcc----------------------------------
Confidence 99876 4999999999999999999999999999775433211000
Q ss_pred HHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcceeeccCCCcccccccccccCCeEEEEeec
Q 010535 373 VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV 452 (508)
Q Consensus 373 ~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~s~G~p~~~~~~~i~d~ 452 (508)
+ +++|.+++||+++++++.+++++.+|+.+++.||+||+++.++...... . ...|.+.+++.++|+|.
T Consensus 205 -~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~--~-~g~~~~~~~~~v~i~d~ 272 (436)
T 3qov_A 205 -E--------TTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFGMTEMNGPGVAFECQE--Q-NGMHFWEDCYLVEIIDP 272 (436)
T ss_dssp -S--------SSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEEGGGTEEEEEEECTT--C-SSEEECTTTEEEEEECT
T ss_pred -c--------CCccEEEEeCCcCCHHHHHHHHHHhCccEEecCcchhhcCCeeEEecCC--C-CeeEEccCceEEEEEEC
Confidence 0 3899999999999999999999999999999999999965533222211 1 23677788999999994
Q ss_pred CCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCCC
Q 010535 453 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPME 507 (508)
Q Consensus 453 ~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~G 507 (508)
+++..++ .|+.|||+|+|. +.+.|.++||+|||+|++|++|
T Consensus 273 ~~g~~~~--~g~~Gel~v~~~------------~~~~~~~~~y~TGDl~~~~~~g 313 (436)
T 3qov_A 273 ETGEPVP--EGEIGELVLTTL------------DREMMPLIRYRTRDLTRILPGK 313 (436)
T ss_dssp TTCSBCS--TTCCEEEEEEES------------SCCSSCCCSEEEEEEECEECSC
T ss_pred CCCCCCC--CCCceEEEEecc------------CcCCceEEEEEcCCEEEEcCCC
Confidence 4565555 458999999983 3445678999999999999997
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=1.6e-31 Score=269.49 Aligned_cols=231 Identities=17% Similarity=0.111 Sum_probs=181.3
Q ss_pred CCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh-HHHHHHHHHHHHHhcCcEE
Q 010535 216 PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHIYDQIIETHCIHKGCSI 294 (508)
Q Consensus 216 ~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl-~~~~g~~~~~~~l~~G~~~ 294 (508)
...++++++++|||||||.||+|.++|+++...+..+...+.. .++..+|++++.+|+ +|..++...+.++..|+++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 163 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRA--AGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTV 163 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHH--TTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHH--cCCCCCCEEEEcccccccccchHHHHHHHHcCCEE
Confidence 4466889999999999999999999999998877655432211 267889999999998 6777777788899999999
Q ss_pred EEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhhccCCCCCCcchhhhHHH
Q 010535 295 GFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLV 373 (508)
Q Consensus 295 v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (508)
++.+. ++..+++.++++++|+++++|+++..|++........ . +
T Consensus 164 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~--------------------------------~---~ 208 (437)
T 2y27_A 164 IPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLD--------------------------------P---V 208 (437)
T ss_dssp ECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC--------------------------------G---G
T ss_pred EeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCC--------------------------------c---c
Confidence 87764 9999999999999999999999999987644321100 0 0
Q ss_pred HHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcc-eeeccCCCcccccccccccCCeEEEEeec
Q 010535 374 FSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNMIGTVGVPMTTVEARLESV 452 (508)
Q Consensus 374 l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~-~~~~~~~~~~~~~s~G~p~~~~~~~i~d~ 452 (508)
+ +++|.+++||+++++++.+++++.+|+++++.||+||+++. +........ ...+.+.+++.++|+|.
T Consensus 209 ~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~~---~g~~~~~~~~~~~i~d~ 277 (437)
T 2y27_A 209 Q--------SSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSEVMGPGVASECVETK---DGPTIWEDHFYPEIIDP 277 (437)
T ss_dssp G--------SSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEETTTTEEEEEECCTTTC---SSCEECTTTEEEEEECT
T ss_pred c--------CCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCCchhhcCCeeEEecCCCC---CceeEccCceEEEEEcC
Confidence 0 38999999999999999999999889999999999998543 333322111 12556778999999993
Q ss_pred CCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcC-CCC
Q 010535 453 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQP-MEL 508 (508)
Q Consensus 453 ~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~-~G~ 508 (508)
+++..++ .|+.|||+|+| .+.+.|.++||+|||+|++|+ +|+
T Consensus 278 ~~g~~~~--~g~~Gel~v~~------------~t~~~~~~~~y~TGDl~~~~~~~G~ 320 (437)
T 2y27_A 278 ETGEVLP--DGELGELVFTS------------LTKEALPIIRYRTRDLTRLLPGTAR 320 (437)
T ss_dssp TTCCBCC--TTCCEEEEEEE------------SSCSSSCCCSEEEEEEECEECCSSS
T ss_pred CCCCCCC--CCCccEEEEec------------CCcCCchhheeecCCEEEEeCCCCC
Confidence 3455555 45899999998 234456789999999999999 685
No 35
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.98 E-value=2.2e-31 Score=268.93 Aligned_cols=246 Identities=15% Similarity=0.087 Sum_probs=186.6
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh-HH
Q 010535 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AH 277 (508)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl-~~ 277 (508)
...+++.... +.......++++++++|||||||.||+|.++|+++..........+.. .++..+|++++.+|+ +|
T Consensus 73 ~~~~~l~~~~--p~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~ 148 (443)
T 2y4o_A 73 STKNDLRDNY--PFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRA--AGGRPGDTLHNAFGYGLF 148 (443)
T ss_dssp BCHHHHHTTT--TTTTCSSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHH--TTCCTTCEEEECSCCSSS
T ss_pred CcHHHHHhhC--CCcccCCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHH--cCCCCCCEEEEeccCccc
Confidence 3445554433 112233466889999999999999999999999998776655442211 267889999999998 57
Q ss_pred HHHHHHHHHHHhcCcEEEEecC-CHhhHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHhhh
Q 010535 278 IYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (508)
Q Consensus 278 ~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (508)
..++...+.++..|+++++.+. ++..+++.++++++|+++++|+++..|++........
T Consensus 149 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~-------------------- 208 (443)
T 2y4o_A 149 TGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMD-------------------- 208 (443)
T ss_dssp HHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC--------------------
T ss_pred ccHHHHHHHHHHcCCEEEECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCC--------------------
Confidence 7777777888999999988764 9999999999999999999999999987643321100
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHHHhcCCceeeeccccCCCcc-eeeccCCCcccc
Q 010535 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNMI 435 (508)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~-~~~~~~~~~~~~ 435 (508)
. ++ +++|.+++||+++++++.+++++.+|+.+++.||+||+++. +........ .
T Consensus 209 ------------~---~~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~~--~ 263 (443)
T 2y4o_A 209 ------------P---AE--------SSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVETK--D 263 (443)
T ss_dssp ------------G---GG--------SSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEEETTTTEEEEEEECTTTC--C
T ss_pred ------------c---cc--------CCceEEEECCCcCCHHHHHHHHHHhCcCEEeccCchhhcCCeEEeccCCCC--C
Confidence 0 00 38999999999999999999999889999999999998543 333222111 0
Q ss_pred cccccccCCeEEEEeecCCCCccCCCCCCCceEEEecCcccccccCCcccccccccCCccccCcEEEEcCC-CC
Q 010535 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM-EL 508 (508)
Q Consensus 436 ~s~G~p~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~~~~~~~~gw~~TGDlg~~d~~-G~ 508 (508)
+ .+.+.+++.++|+|.+++..++ .|+.|||+|+|. +.+.|.++||+|||+|++|++ |+
T Consensus 264 g-~~~~~~~~~~~i~d~~~g~~~~--~G~~Gel~v~~~------------t~~~~p~~~y~TGDl~~~~~~cG~ 322 (443)
T 2y4o_A 264 G-PVIWEDHFYPEIIDPVTGEVLP--DGSQGELVFTSL------------TKEAMPVIRYRTRDLTALLPPTAR 322 (443)
T ss_dssp S-EEECTTTEEEEEECTTTCCBCC--TTCCEEEEEEES------------SCSSSCCSSEEEEEEECEECCSSS
T ss_pred c-eEEccCCeEEEEEcCCCCCCCC--CCCceEEEEeCC------------CcccChhheeecCCEEEEcCCCCC
Confidence 2 4556789999999933465555 458999999982 344567899999999999998 84
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.96 E-value=6.1e-29 Score=244.79 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=170.6
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecCh-HHHHHHHHHHHHHhcCcEEE
Q 010535 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHIYDQIIETHCIHKGCSIG 295 (508)
Q Consensus 217 ~~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl-~~~~g~~~~~~~l~~G~~~v 295 (508)
..++++++++|||||||.||+|.++|+++...+......+. ..+...+|++++.+|+ +|..++...+.++..|+ ++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~--~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~-~v 164 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQ--HRPGRPSGNTLAAIPTGPHIVGAINKERALRLGG-MF 164 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTT--TSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTS-CE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHH--hhCCCCcceEEEecCCCchhhhHHHHHHHHHcCC-EE
Confidence 46788999999999999999999999999998886543321 1267889999999999 99999988777799999 44
Q ss_pred Ee-cCCHh-----------------------hHHHHhhhhcCeEEEecchHHHHHHHHHHHhhhcCChhHHHHHHHHHHH
Q 010535 296 FW-RGDVR-----------------------YLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (508)
Q Consensus 296 ~~-~~~~~-----------------------~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (508)
+. .+++. .+++.++++++|++.++|+++..|++.
T Consensus 165 ~~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~---------------------- 222 (369)
T 3hgu_A 165 FSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKR---------------------- 222 (369)
T ss_dssp ECCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTC----------------------
T ss_pred ECccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhh----------------------
Confidence 44 34666 788899999999999999999998642
Q ss_pred HHhhhccCCCCCCcchhhhHHHHHHHHHHhCCcEEEEEeecCCCCHHHHHHHH-Hhc-CCceeeeccccCCCcceeeccC
Q 010535 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR-VTS-GAPLTQGYGLTESCSGCFTSLA 429 (508)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~-~~~-~~~l~~~YG~TE~~~~~~~~~~ 429 (508)
+.....+++ ++|.+++||+++++++.++++ +.+ ++.+++.||+||+++++.....
T Consensus 223 ---------------~~~~~~~~~--------~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~ 279 (369)
T 3hgu_A 223 ---------------PEVVLQMKQ--------SLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI 279 (369)
T ss_dssp ---------------HHHHHHHHH--------HCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB
T ss_pred ---------------hhhhccccC--------CeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcceecccc
Confidence 112223333 899999999999999999999 898 8999999999998866532211
Q ss_pred CCcccccccccc------cCCeEEEEeecCCCCccCCCCCCCceEEEecC---cccccccCCcccccccccCCccccCc
Q 010535 430 DVFNMIGTVGVP------MTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVIVDGWFHTGD 499 (508)
Q Consensus 430 ~~~~~~~s~G~p------~~~~~~~i~d~~~~~~~~~~~~~~GEl~v~g~---~v~~gY~~~~~~~~~~~~~gw~~TGD 499 (508)
.++|+| +|+++++|+|.+++..++. |+.|||+|++. ..+.+|...+..+.....+||..+|+
T Consensus 280 ------~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~--G~~GEl~vt~l~~~~~l~ry~tgD~~~~~~~~~g~~~d~~ 350 (369)
T 3hgu_A 280 ------TSESQQVIYDSFSPFITYDVVDSITAQTVEY--GERGNVIVTHLSPWAFYPRVAERDTAIRLPGVSGFAGDRL 350 (369)
T ss_dssp ------CTTCSSCEEECCTTTEEEEEECTTTCSBCCT--TCEEEEEEEEEETTEEEEEEEEEEEEEEECCSTTCSSCEE
T ss_pred ------ccCCCcccccCCCCCeEEEEECCCCCcCCCC--CCceEEEEEEcCcccccccccCCceEEEecCCCCCcCccc
Confidence 248999 9999999999336666554 59999999972 22445544443333333455555553
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=96.78 E-value=0.012 Score=59.66 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=25.6
Q ss_pred CCCCeEEEEecCCCC-CCcceeeechHHHHHH
Q 010535 218 KKTNISTIMYTSGTT-GEPKGVVLTNQAIVAE 248 (508)
Q Consensus 218 ~~~~~~~i~~TSGTT-G~pK~v~~sh~~~~~~ 248 (508)
.++.+.+..-||||| |.+|-|.+|...+-..
T Consensus 91 ~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~~ 122 (581)
T 4eql_A 91 SARTITGFLLSSGTSGGAQKMMPWNNKYLDNL 122 (581)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECHHHHHHH
T ss_pred CCCCCCeEEeCCCCCCCCccccccCHHHHHHH
Confidence 456677899999999 7899999999887654
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=96.29 E-value=0.071 Score=54.20 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=26.2
Q ss_pred CCCCeEEEEecCCCC-CCcceeeechHHHHHH
Q 010535 218 KKTNISTIMYTSGTT-GEPKGVVLTNQAIVAE 248 (508)
Q Consensus 218 ~~~~~~~i~~TSGTT-G~pK~v~~sh~~~~~~ 248 (508)
.++.+.++.-||||| |+||-|.+|...+-..
T Consensus 97 ~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~~ 128 (609)
T 4b2g_A 97 SAHPISEFLTSSGTSAGERKLMPTIQEELDRR 128 (609)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECTTHHHHH
T ss_pred CCCCCCeEEeCCCCCCCCceeeecCHHHHHHH
Confidence 456678899999999 8899999999877664
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=95.31 E-value=0.08 Score=53.55 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=25.4
Q ss_pred CCCCeEEEEecCCCC-CCcceeeechHHHHH
Q 010535 218 KKTNISTIMYTSGTT-GEPKGVVLTNQAIVA 247 (508)
Q Consensus 218 ~~~~~~~i~~TSGTT-G~pK~v~~sh~~~~~ 247 (508)
.++.+.++.-||||| |++|-|.+|...+..
T Consensus 96 ~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 96 TGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred CCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 456677899999999 789999999987765
No 40
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=92.20 E-value=1.1 Score=43.88 Aligned_cols=125 Identities=16% Similarity=0.081 Sum_probs=88.5
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--cHhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .|.++ ....+|.+.+...+..++..+...|+.++|++....+. ....+...++++..|+.+++
T Consensus 88 ~~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 88 PQDRISRIHAS--SGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp CGGGCCEEEEC--CCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred ChhHeEEEEEC--CCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 34566655441 23333 23468999999888888888888899999999998885 34445567888999999987
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc-----CCCCccEEEEecCC
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~ 183 (508)
++. .+.+.+...++..++.+++........+.+.... ....++.++.-...
T Consensus 166 ~~~-~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 221 (437)
T 2y27_A 166 FGG-GQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEP 221 (437)
T ss_dssp CCS-CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSC
T ss_pred CCC-CCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCcc
Confidence 765 4788999999999999999887766655443211 12456666665443
No 41
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=91.80 E-value=0.93 Score=44.43 Aligned_cols=124 Identities=10% Similarity=-0.018 Sum_probs=89.3
Q ss_pred CCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--cHhHHHHHHHHHhcCCEEEecc
Q 010535 58 NNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPLY 133 (508)
Q Consensus 58 ~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n--~~~~~~~~lA~~~~G~~~v~l~ 133 (508)
+.++++..+ .|.++ ....+|.+.+...+..++..+...|+.++|++....+- ....+..+++++..|+.+++.+
T Consensus 86 ~~~a~i~~T--SGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 163 (436)
T 3qov_A 86 RDGVRIHSS--SGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAA 163 (436)
T ss_dssp HHEEEEEEC--SCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCC
T ss_pred CCeEEEEEC--CCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCC
Confidence 555655441 23333 23478999999999889888888999999999998874 3445567788899999998876
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc-----CCCCccEEEEecCCC
Q 010535 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANVS 184 (508)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~ 184 (508)
+. .++.+...++..++.+++........+.+.... ....++.++.-...-
T Consensus 164 ~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l 218 (436)
T 3qov_A 164 AG-NSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPH 218 (436)
T ss_dssp SC-CHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCC
T ss_pred CC-CHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcC
Confidence 54 678899999999999999887766655443211 135677777665543
No 42
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=91.39 E-value=1.3 Score=43.49 Aligned_cols=125 Identities=16% Similarity=0.061 Sum_probs=88.5
Q ss_pred CCCCcceeeeeccCCCCCC--ceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--HhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~~--~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .|.++. ...+|.+.+...+..++..+...|+.++|++....+-+ ...+...++++..|+.+++
T Consensus 90 ~~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 90 PREQVVRVHAS--SGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp CGGGCCEEEEE--CCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred ChhheEEEEEC--CCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 34556654431 333332 24679999998888888888888999999999988863 4445567888899999988
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCcc-----CCCCccEEEEecCC
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~ 183 (508)
+++. ..+.+...++..++.+++........+.+.... ....++.++.-...
T Consensus 168 ~~~~-~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 223 (443)
T 2y4o_A 168 MSGG-QTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEP 223 (443)
T ss_dssp CCSC-CHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSC
T ss_pred CCCC-CHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCc
Confidence 7764 788899999999999999887766655443211 12456666665544
No 43
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.61 E-value=10 Score=37.56 Aligned_cols=122 Identities=11% Similarity=-0.010 Sum_probs=85.4
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l 132 (508)
.|+.+|++..+ .|.++ ....+|.+.+...+..+.. ..++.++|++...+|-.-. .+..+++++..|+.++..
T Consensus 161 ~~~d~a~i~~T--SGTTG~PKgv~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 235 (501)
T 3ipl_A 161 NLDDIASIMFT--SGTTGPQKAVPQTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIV 235 (501)
T ss_dssp CTTSEEEEEEC--CTTTSCCCEEEEEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCcEEEEeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeC
Confidence 56778877652 22222 2346899988877666544 4588999999988887533 234467788899998877
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCC
Q 010535 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (508)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 183 (508)
+ ..+++.+...++..++.+++........+.+........++.++.....
T Consensus 236 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~lr~i~~gG~~ 285 (501)
T 3ipl_A 236 D-KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYNLQKILLGGAK 285 (501)
T ss_dssp S-SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSCTTCCEEEECSSC
T ss_pred C-CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCcCcccEEEEeCCC
Confidence 6 4788999999999999999998877776665544333356666665443
No 44
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=80.36 E-value=6.7 Score=37.15 Aligned_cols=104 Identities=10% Similarity=-0.010 Sum_probs=69.6
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--cHhHHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (508)
.++.++++..+ .|.++ ....+|.+.+...+..++..+...|+.++|++...+|- ........+++...|+.+++
T Consensus 89 ~~~~~a~i~~T--SGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~ 166 (369)
T 3hgu_A 89 PADSHPQVYES--GGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFS 166 (369)
T ss_dssp CTTCCCEEEEE--CC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEEC
T ss_pred CccccEEEEEC--CCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEEC
Confidence 35565665542 33333 22467888888888877777778899999999999886 23334455566889995554
Q ss_pred ccCCCCHH-----------------------HHHHHHHhcCceEEEEcCCChhhH
Q 010535 132 LYDTLGAN-----------------------AVEFIINHAEVSIAFVQENKIPSI 163 (508)
Q Consensus 132 l~~~~~~~-----------------------~l~~~l~~~~~~~vi~~~~~~~~~ 163 (508)
.+ ..+. .+...++..++.+++........+
T Consensus 167 ~~--~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l 219 (369)
T 3hgu_A 167 ID--IDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLREL 219 (369)
T ss_dssp CC--CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHH
T ss_pred cc--CChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 33 3444 666688899999998877655544
No 45
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=79.84 E-value=30 Score=34.56 Aligned_cols=122 Identities=7% Similarity=-0.109 Sum_probs=83.5
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH--HH-HHHHHHhcCCEEE
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW--II-AMEACNSQAITYV 130 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~--~~-~~lA~~~~G~~~v 130 (508)
.|+.+|++..+ .|.++ ....+|.+.+...+..+... .++.++|++...+|-+-.+ .. .+++++..|+.++
T Consensus 180 ~~~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 254 (539)
T 1mdb_A 180 KSSDVAFLQLS--GGSTGLSKLIPRTHDDYIYSLKRSVEV---CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVV 254 (539)
T ss_dssp CTTSEEEEEEC--CCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred CcCceEEEEeC--CCcCCCCcEEEEehHHHHHHHHHHHHh---hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEE
Confidence 56777776652 22222 23578999888776665543 4788999998888865333 22 4788889999988
Q ss_pred eccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcC---ccCCCCccEEEEecCC
Q 010535 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (508)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 183 (508)
..+ ...++.+...++..++.+++........+.+.. ...+..++.++.-...
T Consensus 255 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~ 309 (539)
T 1mdb_A 255 LSP-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAK 309 (539)
T ss_dssp ECS-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSC
T ss_pred ECC-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCC
Confidence 765 467889999999999999998876665554322 2234567777665544
No 46
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=78.76 E-value=16 Score=36.71 Aligned_cols=122 Identities=11% Similarity=-0.005 Sum_probs=81.6
Q ss_pred CCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH--HHHHHHHHhcCCEEEecc
Q 010535 58 NNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQAITYVPLY 133 (508)
Q Consensus 58 ~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~--~~~~lA~~~~G~~~v~l~ 133 (508)
+.+|++..+ .|.++ ....+|.+.+...+......+...++.++|++...+|-.-.+ ...+++.+ .|+.++.++
T Consensus 192 ~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~ 268 (548)
T 2d1s_A 192 EQVALIMNS--SGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT 268 (548)
T ss_dssp TCEEEEECC--SSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC
T ss_pred CCEEEEEeC--CCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC
Confidence 677776552 22222 235789999887766655443336788999998888765333 23356667 999888775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc---cCCCCccEEEEecCC
Q 010535 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (508)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~ 183 (508)
...++.+...++..++.+++........+..... .....++.++.-...
T Consensus 269 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~ 320 (548)
T 2d1s_A 269 -KFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAP 320 (548)
T ss_dssp -CCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSC
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCcc
Confidence 5688999999999999999988776666544321 123456666665443
No 47
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=71.76 E-value=19 Score=36.39 Aligned_cols=123 Identities=7% Similarity=-0.005 Sum_probs=86.1
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcH-hHHHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~-~~~~~~lA~~~~G~~~v~l 132 (508)
.|+.+|++..+ .|.++ ....+|.+.+...... ....++.++|++...+|-+. -....+++.+..|+.++.+
T Consensus 212 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~----~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~ 285 (570)
T 4gr5_A 212 GPEDVACVMFT--SGSTGRPKGVMSPHRALTGTYLG----QDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQ 285 (570)
T ss_dssp CTTSEEEEECC--SSCCSSCCCEEEEHHHHHHHHSS----CCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEEC--CcCCCCCeEEEEecHHHHHHHHh----hhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEc
Confidence 56777776652 22222 2247888887543321 22347889999998888753 3455678888899988877
Q ss_pred cC-CCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCC
Q 010535 133 YD-TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS 184 (508)
Q Consensus 133 ~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 184 (508)
.. ...+..+...++..++.++.........+.+........++.++.-....
T Consensus 286 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~lr~~~~gG~~l 338 (570)
T 4gr5_A 286 SGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPEAFEGVRYAITGGEPA 338 (570)
T ss_dssp SSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGGGGTTCSEEEEESSCC
T ss_pred CCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchhhCCCceEEEEecccC
Confidence 54 46788999999999999999988777777666655667788877776543
No 48
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=70.45 E-value=24 Score=36.14 Aligned_cols=124 Identities=10% Similarity=0.062 Sum_probs=85.8
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.|+.+|++..+ .|.+| ....+|.+.+...+.. ....++.++|++....+-+.+. +..+++.+..|+.++..
T Consensus 162 ~~~d~a~iiyT--SGSTG~PKgV~~th~~l~~~~~~----~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~ 235 (620)
T 4dg8_A 162 AADQIAYINFS--SGTTGRPKAIACTHAGITRLCLG----QSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLN 235 (620)
T ss_dssp CTTSEEEEEEE--BSSSSSCEEEEEEHHHHHHHHSS----CGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEEC--CCccccCeEEEEchHHHHHHHHH----HHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeC
Confidence 46778876653 23333 2246788877543322 2335789999999998876443 44578888899988776
Q ss_pred c-CCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCCh
Q 010535 133 Y-DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSS 185 (508)
Q Consensus 133 ~-~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 185 (508)
+ ....++.+...++..++..++........+.+........++.++.-+..-.
T Consensus 236 ~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~l~~lr~v~~gGe~l~ 289 (620)
T 4dg8_A 236 DLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGLRQLLTGGDILS 289 (620)
T ss_dssp CSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCGGGGTTCSEEEEESSCCC
T ss_pred ccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcChhhCCCccEEEEEeCcCC
Confidence 3 3567899999999999999998877766665555555567888877765543
No 49
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=70.31 E-value=30 Score=34.68 Aligned_cols=122 Identities=11% Similarity=-0.048 Sum_probs=81.7
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH---HHHHHHhcCCEEE
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII---AMEACNSQAITYV 130 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~---~~lA~~~~G~~~v 130 (508)
.|+.+|++..+ .|.++ ....+|.+.+...+..++.. .++.++|++...+|..-.+-. .+++.+..|+.++
T Consensus 189 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 263 (544)
T 3o83_A 189 PADEVAFFQLS--GGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVV 263 (544)
T ss_dssp CTTSEEEEEEC--CC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred CccceEEEEEC--CCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEE
Confidence 45677776552 22222 23478999988777666543 488999999998886544322 4788888999888
Q ss_pred eccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc---cCCCCccEEEEecCC
Q 010535 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (508)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~ 183 (508)
..+ ...+..+...++..++.+++........+.+... .....++.++.-...
T Consensus 264 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~ 318 (544)
T 3o83_A 264 MAP-NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGAS 318 (544)
T ss_dssp ECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSC
T ss_pred ECC-CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCC
Confidence 765 4678888899999999999988766555443321 223456666665544
No 50
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=68.72 E-value=31 Score=34.58 Aligned_cols=124 Identities=10% Similarity=-0.062 Sum_probs=81.3
Q ss_pred CCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEEecc
Q 010535 57 PNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLY 133 (508)
Q Consensus 57 p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v~l~ 133 (508)
++.+|++..+ .|.++ ....+|.+.+...+......+...++.++|++...+|-.-. .+...++.+..|+.++.+.
T Consensus 189 ~~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 266 (550)
T 3rix_A 189 DKTIALIMNS--SGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY 266 (550)
T ss_dssp TTSEEEEEEC-------CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS
T ss_pred CCCEEEEEEC--CCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 3556665542 22222 23478888887766555444434578899999888886533 2445677788899888775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc---cCCCCccEEEEecCC
Q 010535 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (508)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~ 183 (508)
...++.+...++..++.+++........+..... .....++.++.-...
T Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~ 318 (550)
T 3rix_A 267 -RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAP 318 (550)
T ss_dssp -SCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSC
T ss_pred -CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCC
Confidence 5788899999999999999988776665544322 223566776665544
No 51
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=68.37 E-value=62 Score=32.29 Aligned_cols=106 Identities=7% Similarity=-0.107 Sum_probs=78.0
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++....+..+ -..-.+|++.+...+..++..+.. .+..++|++...++-.. -.+..+++++..|+..+...
T Consensus 33 p~~~A~~~~~~~~~~-~~~~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 33 GEKTAIISAEPKFPS-EFPESMNFLEICEVTKKLASGISR--KGVRKGEHVGVCIPNSI-DYVMTIYALWRVAATPVPIN 108 (549)
T ss_dssp TTSEEEEEESSCCCC-SSCSEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEeCCCcccc-cccceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEEccC
Confidence 466776654321111 123568999999999988887744 37789999998888653 23345778899999988876
Q ss_pred C--CHhhHHHHhhhhcCeEEEecchHHHHHHH
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (508)
. ..+.+...++..++.+++..+.....+..
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~ 140 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLYENFKP 140 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHHHHHHH
Confidence 4 88999999999999999999887766543
No 52
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=67.49 E-value=32 Score=34.00 Aligned_cols=123 Identities=9% Similarity=-0.023 Sum_probs=81.4
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.++.+|++..+ .|.++ ....+|.+.+...+..... ..++.++|++...+|-+..+ +..+++++..|+.++.+
T Consensus 142 ~~~d~a~i~~T--SGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 216 (512)
T 3fce_A 142 KGDENFYIIYT--SGSTGNPKGVQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAI 216 (512)
T ss_dssp CTTSEEEEEEE--CC----CEEEEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCceEEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEEC
Confidence 45666766552 23232 2246899888776655443 45889999999998876333 45578888999998887
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhHhhcC---ccCCCCccEEEEecCC
Q 010535 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (508)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 183 (508)
++. ..+..+...++..++.+++........+.... ......++.++.....
T Consensus 217 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~ 272 (512)
T 3fce_A 217 DKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEV 272 (512)
T ss_dssp CHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSC
T ss_pred CHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCc
Confidence 653 56788999999999999998876655543322 1223456666665443
No 53
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=67.42 E-value=38 Score=34.17 Aligned_cols=123 Identities=9% Similarity=-0.121 Sum_probs=83.1
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH--HHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII--AMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~--~~lA~~~~G~~~v~ 131 (508)
.|+.+|++..+ .|.++ ....+|.+.+...+..++. ..++.++|++...+|-.-.+-. .+++.+..|+.++.
T Consensus 165 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~ 239 (590)
T 3kxw_A 165 KSNDIAFLQYT--SGSTMHPKGVMVSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIM 239 (590)
T ss_dssp CTTSEEEEEEC--SSCSSSCCEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEE
T ss_pred CCCCeEEEEeC--cCCCCCceEEEeeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEE
Confidence 46777877652 22222 2357899999887766654 4588999999999887755433 37888899999888
Q ss_pred ccCCC---CHHHHHHHHHhcCceEEEEcCCChhhHhhcC------ccCCCCccEEEEecCC
Q 010535 132 LYDTL---GANAVEFIINHAEVSIAFVQENKIPSILSCL------PRCCLYLKTIVSFANV 183 (508)
Q Consensus 132 l~~~~---~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~ 183 (508)
..+.. .+..+...++..++.++.........+.+.. ...+..++.++.-...
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~ 300 (590)
T 3kxw_A 240 MSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEP 300 (590)
T ss_dssp CCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSC
T ss_pred eCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCC
Confidence 76542 5778888899999999887665554443321 1223556666665544
No 54
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=67.33 E-value=53 Score=32.35 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=76.3
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++. .+-.+|++.+...+..++..+.. .+..++|++...++-.. --+..+++++..|+..+...
T Consensus 20 pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~ 87 (509)
T 3ivr_A 20 PDRTAFMV---------DGVRLTHRDYLARAERLASGLLR--DGVHTGDRVAILSQNCS-EMIELIGAVALIGAILLPVN 87 (509)
T ss_dssp TTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecC
Confidence 56677654 12579999999999998887744 37789999998887653 23346778899999988876
Q ss_pred C--CHhhHHHHhhhhcCeEEEecchHHHHHHH
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (508)
. ..+.+...++..++.+++..+.....+..
T Consensus 88 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 119 (509)
T 3ivr_A 88 YRLNADEIAFVLGDGAPSVVVAGTDYRDIVAG 119 (509)
T ss_dssp TTSCHHHHHHHHHHHCEEEEEECSTTHHHHHH
T ss_pred CCCCHHHHHHHHHhcCceEEEECcchhhhHHh
Confidence 5 88899999999999999999887766443
No 55
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=67.02 E-value=31 Score=34.27 Aligned_cols=121 Identities=14% Similarity=0.021 Sum_probs=78.7
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHH--HHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII--AMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~--~~lA~~~~G~~~v~ 131 (508)
.|+.+|++..+ .|.++ ....+|.+.+...+..++.. .++.++|++...+|-.-.+-. .+++++ .|+.++.
T Consensus 168 ~~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~ 241 (517)
T 3r44_A 168 GGDDNLFIMYT--SGTTGHPKGVVHTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLIS 241 (517)
T ss_dssp CTTSEEEEEEE--CC---CCEEEEEEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEE
T ss_pred CCCCeEEEEEC--CcccccCceeeeeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEE
Confidence 35667766552 23222 22478999888777666544 488999999998887644332 244445 8888876
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcC---ccCCCCccEEEEecCC
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 183 (508)
.+ ...+..+...++..++.++.........+.... ......++.++.-...
T Consensus 242 ~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~ 295 (517)
T 3r44_A 242 MP-QFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAP 295 (517)
T ss_dssp CS-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSC
T ss_pred eC-CCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCC
Confidence 64 578899999999999999998876665544321 1223456666665544
No 56
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=66.56 E-value=60 Score=32.33 Aligned_cols=100 Identities=5% Similarity=-0.142 Sum_probs=74.9
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++....+ ....+|++.+...+..++..+.. .+..++|++...++-.. -.+...++++..|+..+...
T Consensus 32 p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 32 GRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLRA--LGVGVGDRVATLGFNHF-RHLEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp TTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEEecC
Confidence 455665543211 24578999999999888877643 36789999998888653 23345778889999988876
Q ss_pred C--CHhhHHHHhhhhcCeEEEecchHHHHH
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (508)
. ..+.+...++..++.+++..+.....+
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 4 788999999999999999988876554
No 57
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=66.47 E-value=59 Score=32.35 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=76.9
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++.. .+| -.+|++.+...+..++..+.. .+..++|++...++-.. -.+..+++++..|+..+..
T Consensus 35 ~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 35 HSSKPCLING---ANG----DVYTYADVELTARRVASGLNK--IGIQQGDVIMLFLPSSP-EFVLAFLGASHRGAIITAA 104 (536)
T ss_dssp STTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCEEecc
Confidence 4567776542 222 468999999999988887744 37789999998888653 2334677889999998887
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchHHHHHHH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (508)
.. ..+.+...++..++.+++..+.....+..
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 137 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEKVKD 137 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHH
Confidence 64 88999999999999999998887766544
No 58
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=66.44 E-value=70 Score=32.51 Aligned_cols=123 Identities=13% Similarity=-0.049 Sum_probs=82.4
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh--HHH-HHHHHHhcCCEEE
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WII-AMEACNSQAITYV 130 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~--~~~-~~lA~~~~G~~~v 130 (508)
.|+.+|++..+ .|-+| ....+|.+.+...+...... .++.++|++....|-+.. ... .+++++..|+.++
T Consensus 182 ~~~~~a~ii~T--SGSTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v 256 (617)
T 3rg2_A 182 PADEVAYFQLS--GGTTGTPKLIPRTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVV 256 (617)
T ss_dssp CTTSEEEEEEC--CCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEE
T ss_pred CCCCeEEEEEC--CCcCCCCCEeehhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEE
Confidence 35677776552 22222 33578999888777665544 368899999999885433 332 4788888899888
Q ss_pred eccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcC-----ccCCCCccEEEEecCCC
Q 010535 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL-----PRCCLYLKTIVSFANVS 184 (508)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 184 (508)
..+. .....+...++..++.++.........+.+.. ......++.++.-+..-
T Consensus 257 ~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l 314 (617)
T 3rg2_A 257 LAAD-PSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARL 314 (617)
T ss_dssp ECSS-CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCC
T ss_pred EeCC-CCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcC
Confidence 7654 57788888999999999998876655544321 11345677777665543
No 59
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=65.81 E-value=49 Score=32.68 Aligned_cols=123 Identities=8% Similarity=-0.055 Sum_probs=82.2
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.++.+|++..+ .|.++ ....+|.+.+...+..++. ..++..+|++....|-+..+ +..+++++..|+.++.+
T Consensus 141 ~~~~~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 215 (511)
T 3e7w_A 141 KEHETFYIIYT--SGSTGNPKGVQISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCV 215 (511)
T ss_dssp CTTSEEEEEEE--CCTTSSCEEEEEEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEc
Confidence 45667776552 23333 2247898888776665543 45788999999988876433 44578889999998876
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhHhhcC---ccCCCCccEEEEecCC
Q 010535 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (508)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 183 (508)
+.. ..+..+...++..++.+++........+.... ......++.++.....
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~ 271 (511)
T 3e7w_A 216 TKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEV 271 (511)
T ss_dssp CHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSC
T ss_pred ChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCC
Confidence 543 46788889999999999998877665554432 2223455666555443
No 60
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=64.24 E-value=66 Score=32.34 Aligned_cols=124 Identities=6% Similarity=-0.116 Sum_probs=80.0
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH--HHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~--~~~lA~~~~G~~~v~ 131 (508)
.|+.+|++..+ .|.++ ....+|.+ +....... .....++.++|++....|-+-.+- ..+++.+..|+..+.
T Consensus 204 ~~~d~a~i~~T--SGTTG~PKgV~~sh~-~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 278 (570)
T 3c5e_A 204 GSQEASAIYFT--SGTSGLPKMAEHSYS-SLGLKAKM--DAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFV 278 (570)
T ss_dssp BTTSEEEEEEC--CCSSSSCCEEEEEHH-HHHHHHHH--HTTTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEE
T ss_pred CCCCcEEEEEC--CCCCCCCCEEEechH-HHHhhhhh--hhhhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEE
Confidence 45677776552 23222 22467887 43311111 124468899999988888764443 346778888988887
Q ss_pred ccC-CCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc--cCCCCccEEEEecCCC
Q 010535 132 LYD-TLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFANVS 184 (508)
Q Consensus 132 l~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 184 (508)
... ...++.+...++..++.+++........+.+... .....++.++.....-
T Consensus 279 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~lr~i~~gGe~l 334 (570)
T 3c5e_A 279 HLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGESL 334 (570)
T ss_dssp ECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSCTTTCCCTTCCEEEEESSCC
T ss_pred ecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhccccccccccceEEEEcCCcC
Confidence 654 6789999999999999999988776666654321 1235567776665443
No 61
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=59.58 E-value=95 Score=31.08 Aligned_cols=85 Identities=8% Similarity=-0.046 Sum_probs=67.0
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
-.+|++.+...+..++..+.. .++.++|++...++-.. -.+...++++..|+..+.... ..+.+...++..++.+
T Consensus 63 ~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 139 (563)
T 1amu_A 63 EQLTYHELNVKANQLARIFIE--KGIGKDTLVGIMMEKSI-DLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARM 139 (563)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSE
T ss_pred ceecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCE
Confidence 468999999988888877643 36788999988888653 223457788899999888764 7889999999999999
Q ss_pred EEecchHHHH
Q 010535 316 FSGVPRVYDR 325 (508)
Q Consensus 316 ~~~~P~~~~~ 325 (508)
++..+.....
T Consensus 140 li~~~~~~~~ 149 (563)
T 1amu_A 140 LLTQKHLVHL 149 (563)
T ss_dssp EEECGGGHHH
T ss_pred EEEcCchhhh
Confidence 9998876543
No 62
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=59.30 E-value=91 Score=30.61 Aligned_cols=98 Identities=16% Similarity=0.025 Sum_probs=71.6
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++.. . .+..+|++.+...+..++..+.. .+..++|++...++-..- .+...++++..|+..+...
T Consensus 16 p~~~a~~~~---~----~~~~~Ty~el~~~~~~~A~~L~~--~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpl~ 85 (504)
T 1t5h_X 16 PDHCALAVP---A----RGLRLTHAELRARVEAVAARLHA--DGLRPQQRVAVVAPNSAD-VVIAILALHRLGAVPALLN 85 (504)
T ss_dssp TTSEEEEET---T----TTEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSCHH-HHHHHHHHHHHTCEEEEEC
T ss_pred CCceEEEEc---C----CCceeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCcEEEecC
Confidence 456666542 1 13578999999999888877644 367889999888886632 2345778899999988876
Q ss_pred C--CHhhHHHHhhhhcCeEEEe--cchHHHHH
Q 010535 299 G--DVRYLMEDIQELKPTMFSG--VPRVYDRI 326 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~--~P~~~~~l 326 (508)
. ..+.+...++..+++.++. .+.....+
T Consensus 86 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 86 PRLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred CccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 5 7889999999999999988 66655443
No 63
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=59.05 E-value=1.2e+02 Score=29.44 Aligned_cols=107 Identities=9% Similarity=-0.025 Sum_probs=76.8
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++.........-....+|++.+...+..++..+... +. ++|++...++-.. --+...++++..|+..+.+
T Consensus 37 ~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~--g~-~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRC--GS-TGDRVVISAPQGL-EYVVAFLGALQAGRIAVPL 112 (480)
T ss_dssp STTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTS--SC-TTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhc--CC-CCCEEEEEcCCcH-HHHHHHHHHHHhCcEEEee
Confidence 356777765542211111346799999999999998887443 33 7899888877653 2234577889999998877
Q ss_pred cC-----CHhhHHHHhhhhcCeEEEecchHHHHHHH
Q 010535 298 RG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (508)
Q Consensus 298 ~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (508)
.. ..+.+...++..++.+++..+.....+..
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 43 56788999999999999999887776543
No 64
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=57.19 E-value=50 Score=30.67 Aligned_cols=65 Identities=6% Similarity=0.006 Sum_probs=49.0
Q ss_pred HHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+.+.| +++|++|.+....+-.-..+.++|..+|..++.+-|...+......++..++++++++..
T Consensus 62 a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 62 AEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34555 488888655556677778888888889998877766666666677889999999999764
No 65
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=57.15 E-value=35 Score=32.01 Aligned_cols=121 Identities=13% Similarity=0.046 Sum_probs=75.1
Q ss_pred HhCCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh-HHHHHHHHHhcCCEEE
Q 010535 54 KRIPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYV 130 (508)
Q Consensus 54 ~~~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~-~~~~~lA~~~~G~~~v 130 (508)
+.+.|.+|++..+ .|-++ ....+|.+.+...+..++. ..++.++|++...+|-.-. .+..++..+..|+..+
T Consensus 33 ~w~~d~~a~Il~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~ 107 (358)
T 4gs5_A 33 KWLGGAREFVLHT--SGSTGMPKPITVTRAQLAASAAMTGK---ALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELT 107 (358)
T ss_dssp HHHHTCSEEEEEE--ECTTSSEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEE
T ss_pred ccCCCCCEEEEEC--CcccccCcEEEEeHHHHHHHHHHHHH---HhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEE
Confidence 4456778876553 23333 2247899998877666554 4588999999988876533 3445566677788877
Q ss_pred eccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCc--cCCCCccEEEEecC
Q 010535 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFAN 182 (508)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~i~~~~ 182 (508)
...+.... ...++..++..+.........+.+... .....++.++.-..
T Consensus 108 ~~~~~~~~---~~~i~~~~~t~~~~~P~~l~~ll~~~~~~~~l~~lr~v~~gG~ 158 (358)
T 4gs5_A 108 VTEPTANP---LAGLDHADFDFVAMVPMQLQSILENSATSGQVDRLGKVLLGGA 158 (358)
T ss_dssp EECCCSCT---TTTCSSCCCSEEEECHHHHHHHHHCTTTGGGGGGGCSEEECSS
T ss_pred ecCccccH---HHHHHHhCCeEEEcChHHHHHhhccccccccCCcceEEEEccc
Confidence 77664332 345677888888877665555544322 22345555655543
No 66
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=56.80 E-value=94 Score=31.94 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=74.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhh-hccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEE
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV-VTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~ 296 (508)
.++.+|++... ..+| ....+|.+.+...+..++..+. . .+..++|++...+|... -.++.+++++..|+..+.
T Consensus 95 ~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~~~--~Gv~~Gd~V~i~~~~~~-e~v~a~lA~~~~Gav~vp 168 (663)
T 1ry2_A 95 TPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLTYS--MGVRKGDTVAVYMPMVP-EAIITLLAISRIGAIHSV 168 (663)
T ss_dssp CTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHHHT--SCCCTTCEEEECCCSSH-HHHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHh--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEe
Confidence 35667766432 2122 2357899999999999888774 3 37789999999998764 233467888999998887
Q ss_pred ecC--CHhhHHHHhhhhcCeEEEecchH
Q 010535 297 WRG--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 297 ~~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
... .++.+...++..++.++++....
T Consensus 169 l~~~~~~~~l~~~l~~~~~~~li~~~~~ 196 (663)
T 1ry2_A 169 VFAGFSSNSLRDRINDGDSKVVITTDES 196 (663)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEEESBC
T ss_pred eCCCCCHHHHHHHHHhcCCeEEEEcccc
Confidence 754 88999999999999999987654
No 67
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=53.19 E-value=63 Score=30.09 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=53.7
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 89 RFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 89 ~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.....+.-+++|.+..+.....-.-+.+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 73 ~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 73 MITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp HHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 3333333333688877777777778888899999999998887777777777778899999999998753
No 68
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=51.70 E-value=74 Score=31.48 Aligned_cols=87 Identities=3% Similarity=-0.133 Sum_probs=68.8
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
..+|++.+...+..++..+.. .+..++|++...++-..- .+...++++..|+..+.... ..+.+...++..++..
T Consensus 47 ~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 123 (529)
T 2v7b_A 47 GSTTYGELEERARRFASALRT--LGVHPEERILLVMLDTVA-LPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARA 123 (529)
T ss_dssp CEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSTH-HHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSE
T ss_pred CCccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcHH-HHHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeE
Confidence 368999999999888877643 367889999888886532 23457788899998887764 7899999999999999
Q ss_pred EEecchHHHHHH
Q 010535 316 FSGVPRVYDRIY 327 (508)
Q Consensus 316 ~~~~P~~~~~l~ 327 (508)
++..+.....+.
T Consensus 124 vi~~~~~~~~~~ 135 (529)
T 2v7b_A 124 VIASGALVQNVT 135 (529)
T ss_dssp EEEEGGGHHHHH
T ss_pred EEechhhhhHHH
Confidence 999888766543
No 69
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=51.36 E-value=75 Score=31.23 Aligned_cols=86 Identities=14% Similarity=0.039 Sum_probs=68.4
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
-.+|++.+...+..++..+... ++.++|++...++-.. -.+..+++++..|+..+.... ..+.+...++..++.+
T Consensus 27 ~~~Ty~eL~~~~~~lA~~L~~~--Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~ 103 (503)
T 4fuq_A 27 DKISYAELVARAGRVANVLVAR--GLQVGDRVAAQTEKSV-EALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKI 103 (503)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHT--TCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSE
T ss_pred cEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 3689999999999888877443 7789999998888663 333467788999999888764 8899999999999999
Q ss_pred EEecchHHHHH
Q 010535 316 FSGVPRVYDRI 326 (508)
Q Consensus 316 ~~~~P~~~~~l 326 (508)
++..+.....+
T Consensus 104 vi~~~~~~~~~ 114 (503)
T 4fuq_A 104 VVCDPSKRDGI 114 (503)
T ss_dssp EEECGGGTTTT
T ss_pred EEECchhhHHH
Confidence 99988765443
No 70
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=49.68 E-value=1.1e+02 Score=30.82 Aligned_cols=98 Identities=11% Similarity=-0.036 Sum_probs=74.0
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++..... | ....+|.+.+...+..++..+.. .++.++|++...++-..- -+..+++++..|+..+..
T Consensus 69 ~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~~--~Gv~~Gd~V~l~~~~~~e-~~~~~lA~~~~Gav~vpl 141 (580)
T 3etc_A 69 SPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFVK--HGIGKGDYVMLTLKSRYD-FWYCMLGLHKLGAIAVPA 141 (580)
T ss_dssp CTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECTTCTH-HHHHHHHHHHHTCEEEEC
T ss_pred CCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCEEEEeC
Confidence 4677887654321 2 24678999999999988887744 378899999988876532 234577888899988877
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
.. ..+.+...++..++.+++..+..
T Consensus 142 ~~~~~~~~l~~~l~~~~~~~ii~~~~~ 168 (580)
T 3etc_A 142 THMLKTRDIVYRIEKAGLKMIVCIAED 168 (580)
T ss_dssp CTTCCHHHHHHHHHHHTCCEEEEESST
T ss_pred CccCCHHHHHHHHHhcCCCEEEEecch
Confidence 64 88999999999999999987654
No 71
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=49.60 E-value=1.3e+02 Score=30.74 Aligned_cols=98 Identities=9% Similarity=0.088 Sum_probs=72.9
Q ss_pred CCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010535 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (508)
Q Consensus 219 ~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~ 298 (508)
++.++++.. +..+| ....+|++.+...+..++..+.. .+..++|++...+|...- .++.+++++..|+..+...
T Consensus 90 pd~~Al~~~-~~~~~--~~~~lTY~eL~~~v~~lA~~L~~--~Gv~~Gd~V~i~~~~~~e-~vva~lA~~~~Gav~vpl~ 163 (652)
T 1pg4_A 90 GDRTAIIWE-GDDTS--QSKHISYRELHRDVCRFANTLLD--LGIKKGDVVAIYMPMVPE-AAVAMLACARIGAVHSVIF 163 (652)
T ss_dssp TTSEEEEEE-CSSTT--CEEEEEHHHHHHHHHHHHHHHHH--HTCCTTCEEEEECCSSHH-HHHHHHHHHHHTCEEEECC
T ss_pred CCceEEEEE-cCCCC--ceeEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCcEEEecC
Confidence 466776643 22222 24578999999999888877643 377899999999887642 3446788889999888776
Q ss_pred C--CHhhHHHHhhhhcCeEEEecchH
Q 010535 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (508)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (508)
. .++.+...++..++.+++.....
T Consensus 164 ~~~~~~~l~~~l~~~~~~~li~~~~~ 189 (652)
T 1pg4_A 164 GGFSPEAVAGCIIDSSSRLVITADEG 189 (652)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEESEE
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 4 88999999999999999886653
No 72
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=48.27 E-value=1e+02 Score=30.37 Aligned_cols=103 Identities=8% Similarity=-0.071 Sum_probs=71.0
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh--HHHHHHHHHhcCCEEEe
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVP 131 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~--~~~~~lA~~~~G~~~v~ 131 (508)
.|+.+|++..+ .|.++ ....+|.+.+...+..++..+ ++.++|++...+|..-. ++..+++.+..|+.++.
T Consensus 153 ~~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~ 227 (505)
T 3nyq_A 153 DDGDPALVVYT--SGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRH 227 (505)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEE
T ss_pred CCCCeEEEEeC--CCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEE
Confidence 46777776653 23333 234789999988887766554 78889998887776432 23457888899999887
Q ss_pred ccCCCCHHHHHHHHHhcCceEEEEcCCChhhHhh
Q 010535 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (508)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (508)
.. ....+.+...+ ..++..++........+.+
T Consensus 228 ~~-~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~ 259 (505)
T 3nyq_A 228 LG-RFSTEGAAREL-NDGATMLFGVPTMYHRIAE 259 (505)
T ss_dssp CS-SCCHHHHHHHH-TTTCCEEEECHHHHHHHHH
T ss_pred CC-CCChHHHHHHH-hhCCeEEEehHHHHHHHHH
Confidence 64 56677777777 6788888887766555544
No 73
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=46.88 E-value=1.1e+02 Score=33.29 Aligned_cols=99 Identities=14% Similarity=0.052 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010535 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (508)
Q Consensus 218 ~~~~~~~i~~TSGTTG~pK~v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~ 297 (508)
.++.++++.. .+| ..+|++.+...+..++..+.. .++.++|++...++-.. -.+...++++..|+..+..
T Consensus 74 ~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~ns~-e~~v~~lA~~~~Ga~~vpl 143 (979)
T 3tsy_A 74 FATKPCLING---PTG----HVYTYSDVHVISRQIAANFHK--LGVNQNDVVMLLLPNCP-EFVLSFLAASFRGATATAA 143 (979)
T ss_dssp TTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECSSCH-HHHHHHHHHHHHTCEEEEE
T ss_pred CCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHHHHH--cCCCCcCEEEEEeCCCH-HHHHHHHHHHHcCCEEEee
Confidence 4577776542 222 468999999999888877644 37789999998888663 3334677889999998887
Q ss_pred cC--CHhhHHHHhhhhcCeEEEecchHHHHH
Q 010535 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (508)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (508)
.. .++.+...++..++.+++..+.....+
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 174 (979)
T 3tsy_A 144 NPFFTPAEIAKQAKASNTKLIITEARYVDKI 174 (979)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECSTTTTTS
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEChHHHHHH
Confidence 64 889999999999999999988766544
No 74
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=44.01 E-value=68 Score=28.70 Aligned_cols=63 Identities=17% Similarity=0.165 Sum_probs=50.4
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
.++++..+..|+...+... |...-++-..|..++.+++.+.+.+|.+.|+ ...++.-|+...+
T Consensus 19 tv~~~i~~~lP~~~~iy~~---D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~----~~IVIACNTa~~~ 81 (269)
T 3ist_A 19 TVVREVLKQLPHEQVYYLG---DTARCPYGPRDKEEVAKFTWEMTNFLVDRGI----KMLVIACNTATAA 81 (269)
T ss_dssp HHHHHHHHHCTTCCEEEEE---CGGGCCCTTSCHHHHHHHHHHHHHHHHHTTC----SEEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCcEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCCccHH
Confidence 3456666789999888877 7777777789999999999999999999866 4667777777654
No 75
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=39.83 E-value=68 Score=36.16 Aligned_cols=123 Identities=11% Similarity=-0.002 Sum_probs=83.0
Q ss_pred CCCCcceeeeeccCCCCC--CceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEec
Q 010535 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (508)
Q Consensus 56 ~p~~~a~~~~~~~~~~~~--~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (508)
.|+.+|++..+ .|-+| ....+|.+.+... .......++.++|++....+-+.+. +.-+++.+..|+.++..
T Consensus 605 ~~~~~ayiiyT--SGSTG~PKgV~~~h~~l~~~----~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 678 (1304)
T 2vsq_A 605 DPNDPAYIMYT--SGTTGKPKGNITTHANIQGL----VKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIA 678 (1304)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEEHHHHHHH----HSSCCSSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEeC--CCCCCCCCEEEEehHHHHHH----HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEEC
Confidence 57788876653 23333 2246888877543 1222335788999998888876554 44577888899988877
Q ss_pred cC--CCCHHHHHHHHHhcCceEEEEcCCChhhHhhcCccCCCCccEEEEecCCC
Q 010535 133 YD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS 184 (508)
Q Consensus 133 ~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 184 (508)
++ ..+++.+...++..++.+++........+..........++.++.-+..-
T Consensus 679 ~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~lr~~~~gGe~l 732 (1304)
T 2vsq_A 679 DEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGEDWMKGLRCILFGGERA 732 (1304)
T ss_dssp CGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCSHHHHTCSEEEEESSCC
T ss_pred ChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhchhcCCCccEEEEecCCC
Confidence 65 46788999999999999998887766665543333335667777665543
No 76
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=38.03 E-value=1.4e+02 Score=29.71 Aligned_cols=107 Identities=10% Similarity=-0.073 Sum_probs=72.5
Q ss_pred eEeeHHHHHHHHHHHHHHHH-----hCCCCCCCEEEEEcCCcHhH-HHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcC
Q 010535 76 VWLTYQEVYDAAIRFGSAMR-----SRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLYDTLGANAVEFIINHAE 149 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~-----~~gv~~gd~Vai~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 149 (508)
..+|.+.+...+..++..+. ...+...+++....+..... +..++..+..|+..+........+.+...++..+
T Consensus 193 V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 272 (562)
T 3ite_A 193 VRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELG 272 (562)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTT
T ss_pred EEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcC
Confidence 46899999988888877664 23567788888777766543 4446778888988876654444567778899999
Q ss_pred ceEEEEcCCChhhHhhcCccCCCCccEEEEecCC
Q 010535 150 VSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (508)
Q Consensus 150 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 183 (508)
+.++.........+. ........++.++.....
T Consensus 273 ~t~~~~~P~~l~~~~-~~~~~~~~lr~~~~gG~~ 305 (562)
T 3ite_A 273 VTHAGIVPSLLDQTG-LVPEDAPHLVYLGVGGEK 305 (562)
T ss_dssp CCEEEECHHHHHHHT-CCGGGSTTCCEEEEESSC
T ss_pred CCEEEcCHHHHhhcc-cCccccCceEEEEEecCC
Confidence 999888765444331 222334566766665544
No 77
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=37.57 E-value=90 Score=28.81 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=51.8
Q ss_pred eeHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEE
Q 010535 78 LTYQEVYDAAIRFG---SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 78 ~Ty~~l~~~v~~~A---~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 154 (508)
+++.+......... ..|+..++++|++|+|...-+.-..+++++....|+.++.++.. .++ ..+....++..+|
T Consensus 137 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~--~~r-~~~~~~~Ga~~~i 213 (348)
T 4eez_A 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN--QDK-LNLAKKIGADVTI 213 (348)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC--HHH-HHHHHHTTCSEEE
T ss_pred CCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc--HHH-hhhhhhcCCeEEE
Confidence 67777654443332 23455689999999999987777777787777778877766643 333 3456677777766
Q ss_pred Ec
Q 010535 155 VQ 156 (508)
Q Consensus 155 ~~ 156 (508)
-.
T Consensus 214 ~~ 215 (348)
T 4eez_A 214 NS 215 (348)
T ss_dssp EC
T ss_pred eC
Confidence 43
No 78
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=37.41 E-value=1.7e+02 Score=26.49 Aligned_cols=64 Identities=8% Similarity=0.055 Sum_probs=44.7
Q ss_pred HHhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+.+.| +++|+.|+. ...+-.-..+.++|...|..++.+-|...+......++..++++++++..
T Consensus 58 a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 58 AEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 34455 466776655 55555666677778899998777666555556666788999999998763
No 79
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=36.66 E-value=2.2e+02 Score=28.28 Aligned_cols=87 Identities=9% Similarity=-0.115 Sum_probs=68.1
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--C-------HhhHHHHh
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--D-------VRYLMEDI 308 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~-------~~~~~~~i 308 (508)
-.+|++.+...+..++..+.. .+..++|++...++-.. -.+..+++++..|+..+.... . .+.+...+
T Consensus 48 ~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l 124 (576)
T 3gqw_A 48 DQLEYQTLKARAEAGAKRLLS--LNLKKGDRVALIAETSS-EFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLL 124 (576)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH--TCCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHH
Confidence 578999999999998887744 36789999998888664 233457788999999887753 3 57888899
Q ss_pred hhhcCeEEEecchHHHHHH
Q 010535 309 QELKPTMFSGVPRVYDRIY 327 (508)
Q Consensus 309 ~~~~~t~~~~~P~~~~~l~ 327 (508)
+..++..++........+.
T Consensus 125 ~~~~~~~ii~~~~~~~~~~ 143 (576)
T 3gqw_A 125 ASCQPAAIITGDEWLPLVN 143 (576)
T ss_dssp HHHCCSEEEECGGGHHHHH
T ss_pred HhcCCCEEEecHHHHHHHH
Confidence 9999999999887766543
No 80
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=35.90 E-value=96 Score=29.11 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=39.9
Q ss_pred HHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcC--ceEEEE
Q 010535 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAE--VSIAFV 155 (508)
Q Consensus 93 ~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~--~~~vi~ 155 (508)
.|...++++||.|.+-.+....+. -++...|+.++.++.. .+.+++...+..-+ .++++.
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~ 135 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPATP---LAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVP 135 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECC
T ss_pred HHHHcCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEE
Confidence 344557889999988777665543 4556789877766532 46788888774444 666663
No 81
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=35.03 E-value=1.2e+02 Score=29.80 Aligned_cols=81 Identities=9% Similarity=-0.057 Sum_probs=63.0
Q ss_pred eeechHHHHHHHHhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHhhHHHHhhhhcCeE
Q 010535 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (508)
Q Consensus 238 v~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~i~~~~~t~ 315 (508)
-.+|++.+...+..++..+.. .+..++|++...++-.. --+...++++..|+..+.... ..+.+...++..++.+
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~~--~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 104 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFIDS--LALLAKSPVLVFGAQTY-DMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSL 104 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH--TCCCTTCCEEEEECSSH-HHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSE
T ss_pred CeecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCE
Confidence 358999999999888877644 36778898888777653 223457788899998887764 8899999999999999
Q ss_pred EEecch
Q 010535 316 FSGVPR 321 (508)
Q Consensus 316 ~~~~P~ 321 (508)
++....
T Consensus 105 ii~~~~ 110 (521)
T 3l8c_A 105 IIAIEE 110 (521)
T ss_dssp EEESSC
T ss_pred EEecCc
Confidence 987654
No 82
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=33.57 E-value=2e+02 Score=26.05 Aligned_cols=63 Identities=10% Similarity=0.041 Sum_probs=43.6
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.| +++|+.|+. ...+-.-..+.++|...|..++.+-|...+......++..++++++++..
T Consensus 57 ~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 57 EKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 466766554 55555556777778889998777655555555666788999999998763
No 83
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=31.92 E-value=2.8e+02 Score=24.94 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=43.7
Q ss_pred HhCC-CCCCC--EEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 95 RSRG-VNPGD--RCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 95 ~~~g-v~~gd--~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.| +++|+ .|+. ...+-.-..+.++|.+.|..++.+-|...+......++..++++++++..
T Consensus 52 ~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 52 EERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3444 56666 4443 44555556677778899998777665555566667788899999998865
No 84
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=31.55 E-value=2.8e+02 Score=24.93 Aligned_cols=63 Identities=13% Similarity=0.058 Sum_probs=44.8
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.| +++|+.|+... .+-.-..+.++|.+.|..++.+-|...+......++..++++++++..
T Consensus 53 ~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 53 EKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp HHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 46777666654 455556677778899998877766655566667888999999999863
No 85
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=31.35 E-value=1.1e+02 Score=27.42 Aligned_cols=62 Identities=8% Similarity=-0.066 Sum_probs=49.0
Q ss_pred HHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 48 FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 48 ~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
.+++..+..|+...+... |...-++-.-+|.++.+.+.+.+.+|.+.|+ ...++.-|+...+
T Consensus 39 v~~~i~~~lP~e~~iy~~---D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~----d~IVIACNTa~~~ 100 (274)
T 3uhf_A 39 VLKSLYEARLFDEIIYYG---DTARVPYGVKDKDTIIKFCLEALDFFEQFQI----DMLIIACNTASAY 100 (274)
T ss_dssp HHHHHHHTTCCSEEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHTTSCC----SEEEECCHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCChhHH
Confidence 455556688999888888 7666666778999999999999999987765 4677777776654
No 86
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=31.01 E-value=2.2e+02 Score=27.34 Aligned_cols=63 Identities=8% Similarity=0.075 Sum_probs=48.1
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
.+.| +++|....+....+-.-..+.++|..+|..++.+-|...+......++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 4556 47776555555667777888888999999888776666666777788999999999974
No 87
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=30.49 E-value=1.8e+02 Score=25.90 Aligned_cols=62 Identities=16% Similarity=0.074 Sum_probs=48.1
Q ss_pred HHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 48 FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 48 ~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
.++...+..|+...+... |...-++-.-+|.++.+.+.+.+..|.+.|+ ...++.-|+...+
T Consensus 22 v~~~i~~~lp~~~~iy~~---D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~----~~iVIACNTa~~~ 83 (268)
T 3out_A 22 IVKNLMSILPNEDIIYFG---DIARIPYGTKSRATIQKFAAQTAKFLIDQEV----KAIIIACNTISAI 83 (268)
T ss_dssp HHHHHHHHCTTCCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHHTTC----SEEEECCHHHHHH
T ss_pred HHHHHHHHCCCCcEEEec---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCChHHH
Confidence 455555678888888777 7766677778999999999999999998766 4666677776653
No 88
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=30.24 E-value=2.6e+02 Score=25.44 Aligned_cols=64 Identities=9% Similarity=0.106 Sum_probs=45.5
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.| +++|....+....+-.-..+.++|.++|..++.+-|...+......++..++++++++..
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 4555 466754444455666667777888899998877666555566667888999999998753
No 89
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=29.22 E-value=2e+02 Score=25.36 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=46.2
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~ 115 (508)
.++++..+..|+...+... |...-++-..++.++.+++.+.+..|.+.|+ ...++.-|+...
T Consensus 17 tv~~~i~~~lP~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~iviaCNTas~ 78 (267)
T 2gzm_A 17 TVAKELIRQLPKERIIYLG---DTARCPYGPRSREEVRQFTWEMTEHLLDLNI----KMLVIACNTATA 78 (267)
T ss_dssp HHHHHHHHHCTTSCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC----SEEEECCHHHHH
T ss_pred HHHHHHHHHCCCCCEEEec---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCchhhH
Confidence 3556666788988887766 6655555567899999999999999998765 466666666654
No 90
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=28.37 E-value=1.2e+02 Score=27.95 Aligned_cols=61 Identities=8% Similarity=-0.001 Sum_probs=39.4
Q ss_pred CCCCCCEEEEEcCCcH------hHHHHHHH-HHhcCCEEEeccCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010535 98 GVNPGDRCGIYGSNCP------EWIIAMEA-CNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~------~~~~~~lA-~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
-+++||+|+|+.|.+. +.+-.... +-..|..++.-..- ...+++..++.+-++++|++...
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 4789999999999863 22222222 34567776643221 13446777888889999998754
No 91
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=28.30 E-value=2e+02 Score=26.02 Aligned_cols=74 Identities=11% Similarity=0.046 Sum_probs=47.8
Q ss_pred eeHHHHHHHHHHH--H-HHHHhCCCCCCCEEEEEc-CCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEE
Q 010535 78 LTYQEVYDAAIRF--G-SAMRSRGVNPGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (508)
Q Consensus 78 ~Ty~~l~~~v~~~--A-~~L~~~gv~~gd~Vai~~-~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (508)
+++.+........ | ..|...++++|++|+|.. .-..-..++.+|- ..|+.++.+. +.++ ..+++..++..+
T Consensus 126 ~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~---~~~~-~~~~~~lGa~~~ 200 (321)
T 3tqh_A 126 LSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTA---SKRN-HAFLKALGAEQC 200 (321)
T ss_dssp SCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE---CHHH-HHHHHHHTCSEE
T ss_pred CCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEe---ccch-HHHHHHcCCCEE
Confidence 6777765443332 2 334556899999999997 5556666666654 5788766554 3445 556677888776
Q ss_pred EEc
Q 010535 154 FVQ 156 (508)
Q Consensus 154 i~~ 156 (508)
+-.
T Consensus 201 i~~ 203 (321)
T 3tqh_A 201 INY 203 (321)
T ss_dssp EET
T ss_pred EeC
Confidence 643
No 92
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=27.22 E-value=3e+02 Score=25.07 Aligned_cols=63 Identities=11% Similarity=0.063 Sum_probs=46.0
Q ss_pred HhCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 95 ~~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
.+.| +++++.|+.. ..+-.-..+.++|..+|..++.+-|...+......++..++++++++..
T Consensus 65 ~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 65 EADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3445 5677776554 4466667777888889998877766666666677889999999999864
No 93
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=26.80 E-value=2.4e+02 Score=26.25 Aligned_cols=61 Identities=10% Similarity=0.036 Sum_probs=39.6
Q ss_pred HHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC----CCHHHHHHHHHhc--CceEEEEcC
Q 010535 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHA--EVSIAFVQE 157 (508)
Q Consensus 94 L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~--~~~~vi~~~ 157 (508)
+...++++||.|.+..+....+.. ++...|+.++.++.. ...+++...++.. ++++++...
T Consensus 64 ~~~l~~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 64 LRVAGVKQDDIVLASSFTFIASVA---PICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HHHTTCCTTCEEEEESSSCGGGTH---HHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HHHcCCCCCCEEEECCCccHHHHH---HHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 334457889998888887766543 334578777666542 4677888877754 566666543
No 94
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=26.58 E-value=2.1e+02 Score=26.30 Aligned_cols=55 Identities=4% Similarity=-0.044 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC----CCHHHHHHHHHhcCceEEEE
Q 010535 100 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 100 ~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~ 155 (508)
++||.|++..+....+.....++...|+.++.++.. .+.+++...++. ++++++.
T Consensus 87 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~ 145 (384)
T 1eg5_A 87 KRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSI 145 (384)
T ss_dssp TTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEE
Confidence 355665555444444333333334455554444321 234444444432 3444443
No 95
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=26.39 E-value=3.5e+02 Score=24.83 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=41.7
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+++|+.|+.... +-.-..+.++|..+|..++.+-|...+......++..++++++++..
T Consensus 75 ~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 75 LKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp SCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 467776655543 55556667777889987776665555566667888899999998763
No 96
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=26.10 E-value=1.8e+02 Score=26.22 Aligned_cols=73 Identities=7% Similarity=0.008 Sum_probs=47.5
Q ss_pred EeeHHHHHHHHHHHHH---HHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEE
Q 010535 77 WLTYQEVYDAAIRFGS---AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (508)
Q Consensus 77 ~~Ty~~l~~~v~~~A~---~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (508)
.+++.+.......++. .|...++++|++|+|+..-..-..++.+|- ..|+.++.+. . .+++. +++..++..+
T Consensus 115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~-~--~~~~~-~~~~lGa~~v 189 (315)
T 3goh_A 115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLN-NAGYVVDLVS-A--SLSQA-LAAKRGVRHL 189 (315)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHH-HHTCEEEEEC-S--SCCHH-HHHHHTEEEE
T ss_pred CCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEE-C--hhhHH-HHHHcCCCEE
Confidence 3788887644443332 333458999999999999556666666664 5688777666 2 33333 3466788877
Q ss_pred E
Q 010535 154 F 154 (508)
Q Consensus 154 i 154 (508)
+
T Consensus 190 ~ 190 (315)
T 3goh_A 190 Y 190 (315)
T ss_dssp E
T ss_pred E
Confidence 7
No 97
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=26.02 E-value=2.4e+02 Score=26.94 Aligned_cols=62 Identities=8% Similarity=-0.040 Sum_probs=29.0
Q ss_pred EEEcCCcHhHHHHH-HHHHhcCCEEEeccCCCCHH--HHHHHHHhcCceEEEEcCCChhhHhhcC
Q 010535 106 GIYGSNCPEWIIAM-EACNSQAITYVPLYDTLGAN--AVEFIINHAEVSIAFVQENKIPSILSCL 167 (508)
Q Consensus 106 ai~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~~~--~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (508)
+++..+..+.+... .++...|-.++..++..... .+...+...+.++++++....+.+.+.+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai 164 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHAC 164 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHC
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhh
Confidence 34445555544332 33444454444444444321 1222455666666666655444444444
No 98
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=25.87 E-value=2.4e+02 Score=25.06 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=46.9
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCcHhH
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~-~gv~~gd~Vai~~~n~~~~ 115 (508)
.++++..+..|+...+... |...-++-..+..++.+++.+.+.+|.+ .|+ ...++.-|+...
T Consensus 17 tv~~~i~~~lP~~~~iy~~---D~~~~PyG~~s~~~i~~~~~~~~~~L~~~~g~----d~iViACNTas~ 79 (272)
T 1zuw_A 17 TVAKEIMRQLPKENIIYVG---DTKRCPYGPRPEEEVLQYTWELTNYLLENHHI----KMLVIACNTATA 79 (272)
T ss_dssp HHHHHHHHHSTTCCEEEEE---CGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCC----SEEEECCHHHHH
T ss_pred HHHHHHHHhCCCCcEEEec---cCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCC----CEEEEeCchhhH
Confidence 4567777789998887666 5554455568999999999999999998 776 466666666654
No 99
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=25.84 E-value=2.4e+02 Score=26.02 Aligned_cols=62 Identities=15% Similarity=0.114 Sum_probs=42.3
Q ss_pred HHHh--CCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 93 AMRS--RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 93 ~L~~--~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
.|.+ .++++|++|+|...-..-..++.+|-...|+.++.++. +.+++. +++..+++.++-..
T Consensus 176 al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi~~~ 239 (359)
T 1h2b_A 176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKLK-LAERLGADHVVDAR 239 (359)
T ss_dssp HHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHHH-HHHHTTCSEEEETT
T ss_pred HHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHHH-HHHHhCCCEEEecc
Confidence 3555 78999999999999667777777766543887666654 344443 45677888777543
No 100
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=25.80 E-value=3.2e+02 Score=24.81 Aligned_cols=56 Identities=11% Similarity=0.093 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEecc--C----CCCHHHHHHHHHh----cCceEEEEcC
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D----TLGANAVEFIINH----AEVSIAFVQE 157 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~--~----~~~~~~l~~~l~~----~~~~~vi~~~ 157 (508)
+++||.|++..+....+... +...|+.++.++ . ....+++...++. -++++++...
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 45788887776666554433 566777766665 2 2356777777764 2556655543
No 101
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=25.42 E-value=45 Score=29.80 Aligned_cols=25 Identities=16% Similarity=0.158 Sum_probs=20.6
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCc
Q 010535 88 IRFGSAMRSRGVNPGDRCGIYGSNC 112 (508)
Q Consensus 88 ~~~A~~L~~~gv~~gd~Vai~~~n~ 112 (508)
..+...|+++||++||.|.+...-+
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl~ 42 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSLS 42 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECTG
T ss_pred HHHHHHHHHcCCCCCCEEEEEechH
Confidence 4566778889999999999998753
No 102
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=25.06 E-value=3.8e+02 Score=24.70 Aligned_cols=55 Identities=4% Similarity=-0.016 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhc---CceEEEEcC
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA---EVSIAFVQE 157 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~vi~~~ 157 (508)
+++||.|++..+....+. .++...|+.++.++. ...+.+...++.. +++++++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~---~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASII---DGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHH---HHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 467788777766655443 345566777776654 4667777777664 566666544
No 103
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=24.90 E-value=2.4e+02 Score=25.80 Aligned_cols=76 Identities=9% Similarity=0.069 Sum_probs=48.9
Q ss_pred eeHHHHHHHHHHH---HHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEE
Q 010535 78 LTYQEVYDAAIRF---GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 78 ~Ty~~l~~~v~~~---A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 154 (508)
+++.+........ -+.|...++++|++|+|......-..++.+|- ..|+.++.++. +.+++. +++..++..++
T Consensus 140 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~i 215 (340)
T 3s2e_A 140 VGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKLN-LARRLGAEVAV 215 (340)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHHH-HHHHTTCSEEE
T ss_pred CCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHHH-HHHHcCCCEEE
Confidence 6777765332221 23455568999999999987666777666665 46887766654 344444 56677887776
Q ss_pred EcC
Q 010535 155 VQE 157 (508)
Q Consensus 155 ~~~ 157 (508)
...
T Consensus 216 ~~~ 218 (340)
T 3s2e_A 216 NAR 218 (340)
T ss_dssp ETT
T ss_pred eCC
Confidence 543
No 104
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=24.76 E-value=2.2e+02 Score=26.26 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-------CCHHHHHHHHHhcCceEEEEc
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-------LGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~ 156 (508)
+++||.|.+..+....+ ..++...|+.++.++.. ...+.+...++..++++++..
T Consensus 106 ~~~gd~vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~ 167 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMF---YSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFC 167 (391)
T ss_dssp SCTTCEEEECSSCCHHH---HHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEE
T ss_pred CCCCCeEEECCCCcHHH---HHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEE
Confidence 35667766655544432 23445566666655432 566777777765566665543
No 105
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=24.65 E-value=2.2e+02 Score=26.16 Aligned_cols=73 Identities=11% Similarity=-0.009 Sum_probs=46.6
Q ss_pred eeHHHHHHHHHHH---HHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEE
Q 010535 78 LTYQEVYDAAIRF---GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (508)
Q Consensus 78 ~Ty~~l~~~v~~~---A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 154 (508)
+++.+........ -..|...++++|++|+|...-..-..++.+|- ..|+.++.+.... +++. +++..+++.++
T Consensus 150 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~--~~~~-~~~~lGa~~v~ 225 (348)
T 3two_A 150 APLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNE--HKKQ-DALSMGVKHFY 225 (348)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSS--TTHH-HHHHTTCSEEE
T ss_pred CCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCH--HHHH-HHHhcCCCeec
Confidence 6777765322221 13455668999999999987556666666665 5688776665433 3333 45567888777
No 106
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=24.41 E-value=3.2e+02 Score=25.11 Aligned_cols=78 Identities=9% Similarity=0.037 Sum_probs=48.3
Q ss_pred eeHHHHHHHH--HHHH-HHHHh-CCCCCCCEEEEEcC-CcHhHHHHHHHHHhcCCEEE-eccCCCCHHHHHHHHHhcCce
Q 010535 78 LTYQEVYDAA--IRFG-SAMRS-RGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYV-PLYDTLGANAVEFIINHAEVS 151 (508)
Q Consensus 78 ~Ty~~l~~~v--~~~A-~~L~~-~gv~~gd~Vai~~~-n~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~l~~~l~~~~~~ 151 (508)
+++.+..... -..| ..|.+ .++++|++|+|... -..-..++.+|- ..|+..+ ..+.....++...+++..++.
T Consensus 140 l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~ 218 (357)
T 1zsy_A 140 IPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALGLRTINVVRDRPDIQKLSDRLKSLGAE 218 (357)
T ss_dssp SCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEECCCSCHHHHHHHHHHTTCS
T ss_pred CCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHH-HcCCEEEEEecCccchHHHHHHHHhcCCc
Confidence 5777654421 1122 23444 47999999999998 556666666665 4687544 444444445555667788888
Q ss_pred EEEEc
Q 010535 152 IAFVQ 156 (508)
Q Consensus 152 ~vi~~ 156 (508)
.++..
T Consensus 219 ~vi~~ 223 (357)
T 1zsy_A 219 HVITE 223 (357)
T ss_dssp EEEEH
T ss_pred EEEec
Confidence 77753
No 107
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=24.25 E-value=2.4e+02 Score=25.85 Aligned_cols=78 Identities=9% Similarity=-0.050 Sum_probs=49.6
Q ss_pred eeHHHHHHHHHHH---HHHHHhC--CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceE
Q 010535 78 LTYQEVYDAAIRF---GSAMRSR--GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (508)
Q Consensus 78 ~Ty~~l~~~v~~~---A~~L~~~--gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (508)
+++.+........ -..|.+. ++++|++|+|...-..-..++.+|-..-|+.++.++. +.+++ .+++..+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~~-~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDRL-ALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHHH-HHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHH-HHHHHcCCCE
Confidence 5666655333221 2334453 7899999999998667777777777665677666654 23443 4567788887
Q ss_pred EEEcCC
Q 010535 153 AFVQEN 158 (508)
Q Consensus 153 vi~~~~ 158 (508)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 775543
No 108
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=23.85 E-value=50 Score=29.64 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=19.7
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCc
Q 010535 89 RFGSAMRSRGVNPGDRCGIYGSNC 112 (508)
Q Consensus 89 ~~A~~L~~~gv~~gd~Vai~~~n~ 112 (508)
.+...|+++||++||.|.+...-+
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl~ 40 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSLS 40 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECSG
T ss_pred HHHHHHHHcCCCCCCEEEEEechH
Confidence 356778889999999999997643
No 109
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=23.82 E-value=50 Score=29.76 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=23.1
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC 112 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~ 112 (508)
+.+|-.+| ...|+++||++||.|.+...-+
T Consensus 20 ~~~T~~~L-------~~~L~~LGI~~Gd~llVHsSL~ 49 (286)
T 3sma_A 20 ELVTRDRL-------ASDLAALGVRPGGVLLVHASLS 49 (286)
T ss_dssp CEECHHHH-------HHHHHHHTCCTTCEEEEEECST
T ss_pred CCcCHHHH-------HHHHHHcCCCCCCEEEEEechH
Confidence 45776665 5567888999999999997643
No 110
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=23.19 E-value=2.9e+02 Score=24.64 Aligned_cols=62 Identities=11% Similarity=0.076 Sum_probs=45.8
Q ss_pred HHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhH
Q 010535 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (508)
Q Consensus 47 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~ 115 (508)
.++++..+..|+...+.+. |...-++-..++.++.+++.+.+..|.+.|+ .+.++.-|+...
T Consensus 36 tv~~~i~~~~P~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~IVIaCNTas~ 97 (286)
T 2jfq_A 36 TVAKEIMRQLPNETIYYLG---DIGRCPYGPRPGEQVKQYTVEIARKLMEFDI----KMLVIACNTATA 97 (286)
T ss_dssp HHHHHHHHHCTTCCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHTTSCC----SEEEECCHHHHH
T ss_pred HHHHHHHHHCCCccEEEec---cCCCCCcCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCchhH
Confidence 5577777788988877666 5544445567999999999999999987665 466666666654
No 111
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=22.69 E-value=1.7e+02 Score=20.12 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=34.6
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCE
Q 010535 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (508)
Q Consensus 76 ~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~ 128 (508)
..+.+.++.+. +.+.++.+++.|.+++.....+..+...+...|..
T Consensus 22 ~~ip~~~l~~~-------~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKER-------IATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHHH-------HHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHHH-------HHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 46777776543 44456778889999999988888888888888864
No 112
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=22.58 E-value=3.1e+02 Score=24.51 Aligned_cols=64 Identities=13% Similarity=0.176 Sum_probs=47.2
Q ss_pred HHHHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHhHH
Q 010535 46 WQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (508)
Q Consensus 46 ~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~~~ 116 (508)
..++++..+..|+...+... |...-.+-..++.++.+++.+.+..|.+.|+ ...++.-|+...+
T Consensus 37 ltv~~~i~~~~P~~~~iy~~---D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~----d~IVIACNTas~~ 100 (290)
T 2vvt_A 37 LTVLKEALKQLPNERLIYLG---DTARCPYGPRPAEQVVQFTWEMADFLLKKRI----KMLVIACNTATAV 100 (290)
T ss_dssp HHHHHHHHHHCTTSCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC----SEEEECCHHHHHH
T ss_pred HHHHHHHHHHCCCccEEEec---ccccCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCcchhHH
Confidence 45777778889998877666 5544444457899999999999999988765 4666666666543
No 113
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=22.49 E-value=2.1e+02 Score=26.48 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=39.4
Q ss_pred CCCCCCEEEEEcCCcHh------HHHHHHH-HHhcCCEEEeccCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010535 98 GVNPGDRCGIYGSNCPE------WIIAMEA-CNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
-+++||+|+|+.|.+.- .+-.... +-..|..++.-... ...+++..++.+-++++|++...
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 47899999999999842 2322233 33478776642111 12346777777788999998764
No 114
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=22.06 E-value=4.3e+02 Score=25.97 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=45.9
Q ss_pred hCC-CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcC
Q 010535 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 96 ~~g-v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
+.| +++|+.|+. ...+-.-..+.++|..+|..++.+-|...+......++..++.++++..
T Consensus 106 ~~g~~~~g~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 106 EQGLLKPGYTIIE-PTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HcCCCCCCCEEEE-eCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 445 578887755 4555566777778888999888776666666777888999999999875
No 115
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=21.81 E-value=1.7e+02 Score=27.56 Aligned_cols=61 Identities=13% Similarity=0.170 Sum_probs=39.3
Q ss_pred CCCCCCEEEEEcCCcHh------HHHHHHH-HHhcCCEEEeccCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010535 98 GVNPGDRCGIYGSNCPE------WIIAMEA-CNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
-+++||+|+|+.|.+.- .+-.... +-..|..++.-..- ...++|..++++-++++|++...
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 58999999999999742 2222232 33478777643221 12345666777778899998764
No 116
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=21.65 E-value=3.4e+02 Score=25.20 Aligned_cols=58 Identities=12% Similarity=0.024 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC----CCHHHHHHHHHhcCceEEEEcC
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQE 157 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 157 (508)
+++||.|.+..+...... ..-++...|+.++.++.. ...+++...++..++++++...
T Consensus 83 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 144 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFGYL-LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVH 144 (416)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEc
Confidence 567787777765443211 223455566655544332 3566777777655566665543
No 117
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=21.65 E-value=2.2e+02 Score=26.38 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=26.4
Q ss_pred CCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEEE
Q 010535 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFV 155 (508)
Q Consensus 97 ~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 155 (508)
.++++||.|.+..+...... -++...|+.++.++.. ...+.+...++. ++++++.
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 133 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVSTL---NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIP 133 (393)
T ss_dssp TTCCTTCEEEEESSSCHHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECC
T ss_pred cCCCCCCEEEeCCCccHhHH---HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEE
Confidence 34566666666555544432 2334556555444321 344555555432 3444443
No 118
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=21.49 E-value=1.7e+02 Score=25.64 Aligned_cols=60 Identities=10% Similarity=-0.006 Sum_probs=45.4
Q ss_pred HHHHHHHhCCCCcceeeeeccCCCCCCceEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCcHh
Q 010535 48 FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (508)
Q Consensus 48 ~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~Ty~~l~~~v~~~A~~L~~~gv~~gd~Vai~~~n~~~ 114 (508)
++++..+..|+...+... |....++...++.++.+.+.+.+..|.+.|+ ...++.-|+..
T Consensus 15 v~~~l~~~lP~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~iviaCNTa~ 74 (255)
T 2jfz_A 15 VLKSLLKARLFDEIIYYG---DSARVPYGTKDPTTIKQFGLEALDFFKPHEI----ELLIVACNTAS 74 (255)
T ss_dssp HHHHHHHTTCCSEEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHGGGCC----SCEEECCHHHH
T ss_pred HHHHHHHHCCCCCEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCchhh
Confidence 455666778998888877 6665566667999999999999999998765 34555556654
No 119
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=20.88 E-value=2e+02 Score=26.43 Aligned_cols=61 Identities=7% Similarity=0.010 Sum_probs=39.5
Q ss_pred CCCCCCEEEEEcCCcHh------HHHHHHH-HHhcCCEEEeccCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010535 98 GVNPGDRCGIYGSNCPE------WIIAMEA-CNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
-+++||+|+|+.|.+.- .+-.... +...|..++.-..- ...+++...+++-++++|++...
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 47899999999999752 2323333 33478777643211 12346777777788899998764
No 120
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=20.78 E-value=2.8e+02 Score=21.03 Aligned_cols=54 Identities=9% Similarity=-0.039 Sum_probs=40.6
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEecc--CCCCHHHHHH
Q 010535 90 FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--DTLGANAVEF 143 (508)
Q Consensus 90 ~A~~L~~~gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~--~~~~~~~l~~ 143 (508)
.+.+|.+.|+..+..+.+...+..+.+.++-=+++.|...+.|- +..+..+.+.
T Consensus 46 ~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~~RR 101 (119)
T 1ofu_X 46 THEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQ 101 (119)
T ss_dssp CHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHHH
T ss_pred CHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHHHHH
Confidence 46788899998888888888888899999999999988655442 4555554443
No 121
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=20.64 E-value=3.2e+02 Score=26.26 Aligned_cols=75 Identities=15% Similarity=0.144 Sum_probs=46.5
Q ss_pred eeHHHHHHHHHHH--HH-HHHh---CCCCCCCEEEEEcCCc-HhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCc
Q 010535 78 LTYQEVYDAAIRF--GS-AMRS---RGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEV 150 (508)
Q Consensus 78 ~Ty~~l~~~v~~~--A~-~L~~---~gv~~gd~Vai~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 150 (508)
+++.+........ |. .|.. .++++|++|+|....+ .-..++.+| ...|+.++.+.. +.+++. +++..++
T Consensus 199 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqla-k~~Ga~vi~~~~--~~~~~~-~~~~lGa 274 (456)
T 3krt_A 199 LSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFA-LAGGANPICVVS--SPQKAE-ICRAMGA 274 (456)
T ss_dssp SCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEES--SHHHHH-HHHHHTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHH-HHcCCeEEEEEC--CHHHHH-HHHhhCC
Confidence 6777765332222 22 2322 4799999999999844 555555555 567887766653 455554 4577788
Q ss_pred eEEEEc
Q 010535 151 SIAFVQ 156 (508)
Q Consensus 151 ~~vi~~ 156 (508)
..++..
T Consensus 275 ~~vi~~ 280 (456)
T 3krt_A 275 EAIIDR 280 (456)
T ss_dssp CEEEET
T ss_pred cEEEec
Confidence 777654
No 122
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=20.58 E-value=3.4e+02 Score=25.06 Aligned_cols=55 Identities=4% Similarity=-0.014 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCC-----CCHHHHHHHHHhcCceEEEEc
Q 010535 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 98 gv~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (508)
++++||.|.+..+....... ++...|+.++.++.. ...+.+...++. ++++++..
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 67889988887776655443 455678776655432 356677766653 55666653
No 123
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=20.40 E-value=4.3e+02 Score=23.75 Aligned_cols=64 Identities=6% Similarity=-0.028 Sum_probs=44.3
Q ss_pred HHhCCC-CCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCC
Q 010535 94 MRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (508)
Q Consensus 94 L~~~gv-~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (508)
+.+.|. ++|+.|+.. ..+-.-..+.++|..+|..++.+-|...+......++..++++++++..
T Consensus 53 a~~~g~~~~~~~vv~~-ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 53 AEKDGTLTKGKEIVDA-TSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHTTSSCTTCEEEES-CCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344453 666655554 3455666777788899997776655555566667888899999998764
No 124
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=20.31 E-value=3.8e+02 Score=24.63 Aligned_cols=57 Identities=14% Similarity=0.078 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHhcCCEEEeccC----CCCHHHHHHHHHhcCceEEEEc
Q 010535 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQ 156 (508)
Q Consensus 99 v~~gd~Vai~~~n~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~vi~~ 156 (508)
+++||.|++..+....+. ..-++...|+.++.++. ....+++...++..++++++..
T Consensus 90 ~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 150 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLT 150 (396)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 457788777766655432 12245566766555442 2566777777765456666654
No 125
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=20.28 E-value=1.8e+02 Score=26.85 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=38.3
Q ss_pred CCcHhHHHHHHHHHhcCCEEEeccCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010535 110 SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (508)
Q Consensus 110 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (508)
..+-.-..+.++|.++|..++.+-|...+......++..++++++++...
T Consensus 83 SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 83 SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSD 132 (346)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 34556677778899999987777666666667788899999999997653
Done!