Query 010538
Match_columns 508
No_of_seqs 171 out of 2288
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 01:42:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010538.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010538hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02724 Molybdenum cofactor s 100.0 4.6E-61 1E-65 538.3 46.1 469 6-499 1-486 (805)
2 COG0520 csdA Selenocysteine ly 100.0 3.6E-59 7.8E-64 482.2 40.2 393 24-500 3-404 (405)
3 COG1104 NifS Cysteine sulfinat 100.0 2.1E-57 4.6E-62 452.9 33.2 375 41-505 2-381 (386)
4 PRK09295 bifunctional cysteine 100.0 1.4E-50 3E-55 423.7 39.9 391 24-501 3-404 (406)
5 PRK10874 cysteine sulfinate de 100.0 1.3E-49 2.8E-54 415.8 40.2 392 23-503 3-400 (401)
6 TIGR03392 FeS_syn_CsdA cystein 100.0 1.9E-49 4.1E-54 414.1 39.7 389 25-502 2-396 (398)
7 PLN02855 Bifunctional selenocy 100.0 8.5E-49 1.8E-53 412.5 39.0 397 27-506 15-423 (424)
8 KOG1549 Cysteine desulfurase N 100.0 1.7E-48 3.7E-53 389.9 30.0 377 39-506 42-423 (428)
9 PLN02651 cysteine desulfurase 100.0 3.6E-48 7.8E-53 399.8 31.9 360 42-489 1-364 (364)
10 TIGR01979 sufS cysteine desulf 100.0 1E-46 2.3E-51 394.0 38.7 390 28-502 2-402 (403)
11 TIGR03402 FeS_nifS cysteine de 100.0 4.4E-47 9.5E-52 393.8 35.3 370 42-502 1-373 (379)
12 PF00266 Aminotran_5: Aminotra 100.0 5.6E-47 1.2E-51 391.9 29.1 366 42-491 1-371 (371)
13 TIGR03403 nifS_epsilon cystein 100.0 5.6E-46 1.2E-50 385.9 36.0 372 42-504 1-378 (382)
14 TIGR02006 IscS cysteine desulf 100.0 7.2E-45 1.6E-49 380.0 36.5 374 40-504 3-380 (402)
15 PRK02948 cysteine desulfurase; 100.0 5.9E-44 1.3E-48 370.6 34.5 371 41-501 1-374 (381)
16 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.1E-43 6.8E-48 367.0 39.0 377 25-495 2-397 (397)
17 TIGR01814 kynureninase kynuren 100.0 4.2E-43 9E-48 367.2 33.0 383 25-499 9-405 (406)
18 cd06453 SufS_like Cysteine des 100.0 9.6E-41 2.1E-45 345.4 35.7 368 42-495 1-373 (373)
19 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.2E-40 2.6E-45 345.0 35.9 371 42-497 1-375 (376)
20 TIGR03235 DNA_S_dndA cysteine 100.0 3.1E-41 6.6E-46 346.7 31.2 346 43-479 1-353 (353)
21 PRK14012 cysteine desulfurase; 100.0 1.2E-40 2.6E-45 348.4 35.7 372 40-504 3-382 (404)
22 PRK03080 phosphoserine aminotr 100.0 2.6E-37 5.6E-42 320.1 31.3 361 34-502 6-374 (378)
23 PLN02409 serine--glyoxylate am 100.0 2.9E-36 6.3E-41 314.7 33.8 362 39-501 7-372 (401)
24 cd06451 AGAT_like Alanine-glyo 100.0 1.1E-34 2.4E-39 298.2 33.4 350 46-500 4-356 (356)
25 TIGR02326 transamin_PhnW 2-ami 100.0 6.9E-34 1.5E-38 293.2 34.5 330 81-501 32-362 (363)
26 cd00611 PSAT_like Phosphoserin 100.0 2E-34 4.2E-39 296.2 29.4 342 47-499 5-354 (355)
27 TIGR01788 Glu-decarb-GAD gluta 100.0 1.7E-32 3.7E-37 286.2 31.2 357 39-502 32-430 (431)
28 PRK02769 histidine decarboxyla 100.0 1.1E-32 2.3E-37 284.0 28.7 340 39-500 21-371 (380)
29 TIGR01364 serC_1 phosphoserine 100.0 4.6E-32 1E-36 277.1 32.2 339 51-500 2-347 (349)
30 PRK13479 2-aminoethylphosphona 100.0 1.2E-31 2.6E-36 277.0 34.1 327 82-501 35-363 (368)
31 PTZ00094 serine hydroxymethylt 100.0 1.2E-32 2.7E-37 291.4 26.0 354 39-501 34-408 (452)
32 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 9.8E-31 2.1E-35 268.3 34.1 325 82-498 29-354 (355)
33 TIGR01366 serC_3 phosphoserine 100.0 9.2E-31 2E-35 269.2 32.6 348 47-501 9-360 (361)
34 COG0075 Serine-pyruvate aminot 100.0 1.4E-30 3.1E-35 262.5 33.0 356 46-504 10-366 (383)
35 COG3844 Kynureninase [Amino ac 100.0 8.8E-31 1.9E-35 250.3 26.7 379 25-502 18-403 (407)
36 PRK05355 3-phosphoserine/phosp 100.0 2.5E-30 5.4E-35 265.6 31.6 345 43-500 5-357 (360)
37 PRK13520 L-tyrosine decarboxyl 100.0 2.6E-30 5.5E-35 267.1 29.8 332 43-499 24-369 (371)
38 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 8.6E-30 1.9E-34 264.9 33.3 354 39-501 18-381 (387)
39 PLN03032 serine decarboxylase; 100.0 4.3E-30 9.3E-35 262.9 28.7 336 39-497 22-372 (374)
40 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.6E-29 3.4E-34 261.5 29.7 333 43-497 24-372 (373)
41 cd00613 GDC-P Glycine cleavage 100.0 4.9E-29 1.1E-33 260.2 29.0 362 39-495 20-398 (398)
42 cd06450 DOPA_deC_like DOPA dec 100.0 1.6E-29 3.5E-34 258.6 22.3 293 76-497 30-344 (345)
43 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.4E-27 3.1E-32 246.1 33.2 344 48-499 9-360 (361)
44 TIGR01822 2am3keto_CoA 2-amino 100.0 8.9E-28 1.9E-32 250.3 32.0 329 52-502 53-390 (393)
45 PRK00451 glycine dehydrogenase 100.0 3.3E-27 7.2E-32 250.2 30.5 323 82-499 110-446 (447)
46 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.3E-26 2.8E-31 239.7 31.6 309 84-500 51-367 (370)
47 PLN02414 glycine dehydrogenase 100.0 6.7E-27 1.4E-31 261.6 31.6 350 33-497 93-465 (993)
48 COG0436 Aspartate/tyrosine/aro 100.0 4.7E-27 1E-31 243.3 28.2 347 39-501 28-391 (393)
49 PRK04366 glycine dehydrogenase 100.0 2.1E-26 4.5E-31 245.3 33.3 365 42-503 71-450 (481)
50 PRK06225 aspartate aminotransf 100.0 2E-26 4.4E-31 239.1 32.3 342 39-504 28-379 (380)
51 cd06454 KBL_like KBL_like; thi 100.0 8.2E-27 1.8E-31 238.8 28.7 324 53-498 17-348 (349)
52 PRK06108 aspartate aminotransf 100.0 1.5E-26 3.3E-31 240.0 31.0 341 39-499 24-380 (382)
53 PLN02452 phosphoserine transam 100.0 2.1E-26 4.5E-31 235.7 31.2 349 41-500 7-362 (365)
54 PRK05937 8-amino-7-oxononanoat 100.0 5.4E-27 1.2E-31 242.5 26.7 326 43-502 14-351 (370)
55 PRK07908 hypothetical protein; 100.0 1.8E-26 4E-31 236.7 29.9 318 39-500 22-346 (349)
56 PRK08960 hypothetical protein; 100.0 1.7E-26 3.7E-31 240.3 28.6 347 29-499 24-385 (387)
57 PRK05387 histidinol-phosphate 100.0 2.7E-26 5.8E-31 235.7 29.1 323 39-500 24-352 (353)
58 cd00378 SHMT Serine-glycine hy 100.0 2.7E-26 5.8E-31 240.0 27.5 348 40-501 20-385 (402)
59 TIGR01141 hisC histidinol-phos 100.0 3.7E-26 8E-31 234.0 27.3 321 39-496 19-346 (346)
60 PRK06207 aspartate aminotransf 100.0 1.6E-25 3.4E-30 234.3 32.2 348 39-501 39-402 (405)
61 PLN02414 glycine dehydrogenase 99.9 6.9E-26 1.5E-30 253.5 30.8 327 79-504 563-910 (993)
62 PRK07681 aspartate aminotransf 99.9 1.2E-25 2.7E-30 234.8 30.4 335 39-498 32-385 (399)
63 PLN03026 histidinol-phosphate 99.9 3.9E-25 8.4E-30 229.4 33.9 334 25-498 39-379 (380)
64 PRK09105 putative aminotransfe 99.9 2E-25 4.3E-30 230.7 30.5 319 39-499 43-368 (370)
65 TIGR00858 bioF 8-amino-7-oxono 99.9 3.1E-25 6.7E-30 227.8 31.6 334 39-496 14-360 (360)
66 PRK03158 histidinol-phosphate 99.9 3.9E-25 8.4E-30 227.7 31.9 331 25-498 18-358 (359)
67 PRK00950 histidinol-phosphate 99.9 2.1E-25 4.5E-30 229.8 29.5 337 17-500 16-361 (361)
68 PRK05958 8-amino-7-oxononanoat 99.9 3.5E-25 7.7E-30 229.7 31.1 335 39-498 37-384 (385)
69 KOG2862 Alanine-glyoxylate ami 99.9 7.1E-25 1.5E-29 208.6 30.1 352 47-499 23-380 (385)
70 PRK00011 glyA serine hydroxyme 99.9 2.1E-25 4.5E-30 234.3 29.4 349 39-501 25-389 (416)
71 PRK07179 hypothetical protein; 99.9 2.7E-25 5.9E-30 232.7 29.8 319 53-502 70-399 (407)
72 TIGR01437 selA_rel uncharacter 99.9 4.5E-25 9.8E-30 227.3 30.7 327 45-499 18-363 (363)
73 PRK05957 aspartate aminotransf 99.9 1.2E-24 2.5E-29 226.6 33.2 340 39-501 27-385 (389)
74 PRK04870 histidinol-phosphate 99.9 5.9E-25 1.3E-29 226.1 29.6 324 39-498 26-355 (356)
75 PRK05367 glycine dehydrogenase 99.9 3.8E-25 8.3E-30 248.7 30.4 343 42-496 79-437 (954)
76 PRK02731 histidinol-phosphate 99.9 9.1E-25 2E-29 225.6 30.9 335 25-500 21-365 (367)
77 PRK06939 2-amino-3-ketobutyrat 99.9 1.1E-24 2.3E-29 227.1 31.5 329 52-501 57-393 (397)
78 PRK08056 threonine-phosphate d 99.9 5.8E-25 1.3E-29 226.2 29.0 325 39-499 20-353 (356)
79 PRK01533 histidinol-phosphate 99.9 4.9E-25 1.1E-29 227.4 27.9 327 25-500 18-354 (366)
80 TIGR03540 DapC_direct LL-diami 99.9 1.8E-24 3.9E-29 224.8 32.2 336 39-497 29-382 (383)
81 PLN02483 serine palmitoyltrans 99.9 2.2E-24 4.7E-29 229.9 31.3 309 82-503 144-468 (489)
82 PRK09276 LL-diaminopimelate am 99.9 2.8E-24 6E-29 223.5 31.1 336 39-497 31-384 (385)
83 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.7E-24 5.9E-29 223.4 30.7 336 40-501 34-381 (385)
84 PRK01688 histidinol-phosphate 99.9 7.9E-25 1.7E-29 224.8 25.9 285 87-496 60-351 (351)
85 PRK14807 histidinol-phosphate 99.9 3.2E-24 7E-29 220.3 29.7 322 40-499 23-350 (351)
86 PRK13580 serine hydroxymethylt 99.9 1.2E-24 2.6E-29 226.6 26.7 348 39-500 49-444 (493)
87 PRK12414 putative aminotransfe 99.9 3.7E-24 8E-29 222.5 30.3 340 39-497 29-383 (384)
88 TIGR03537 DapC succinyldiamino 99.9 3.5E-24 7.5E-29 219.9 29.6 295 87-497 39-349 (350)
89 TIGR03799 NOD_PanD_pyr putativ 99.9 1.2E-24 2.5E-29 231.9 26.7 331 75-494 120-518 (522)
90 PRK12462 phosphoserine aminotr 99.9 8.2E-24 1.8E-28 214.5 31.2 349 41-500 5-361 (364)
91 PLN02263 serine decarboxylase 99.9 7.9E-24 1.7E-28 220.0 31.7 337 41-500 91-442 (470)
92 PRK07337 aminotransferase; Val 99.9 2.2E-24 4.8E-29 224.5 27.6 340 39-499 30-387 (388)
93 PRK08361 aspartate aminotransf 99.9 2.8E-24 6E-29 224.0 28.2 337 39-500 33-389 (391)
94 COG0079 HisC Histidinol-phosph 99.9 8E-24 1.7E-28 215.8 30.7 325 39-500 22-353 (356)
95 cd00609 AAT_like Aspartate ami 99.9 2.2E-24 4.7E-29 220.0 26.2 298 86-497 38-350 (350)
96 PRK07366 succinyldiaminopimela 99.9 4.5E-24 9.8E-29 222.1 28.4 339 39-498 30-387 (388)
97 PRK05942 aspartate aminotransf 99.9 9.3E-24 2E-28 220.3 30.6 308 39-434 35-360 (394)
98 PRK04635 histidinol-phosphate 99.9 2.5E-24 5.5E-29 221.3 25.7 281 86-498 62-352 (354)
99 PRK07309 aromatic amino acid a 99.9 1.3E-23 2.8E-28 218.9 30.9 341 39-501 30-388 (391)
100 PRK05166 histidinol-phosphate 99.9 2.3E-23 5E-28 215.6 32.2 334 25-500 25-370 (371)
101 PLN00175 aminotransferase fami 99.9 1.3E-23 2.9E-28 220.2 30.6 345 39-500 54-412 (413)
102 PRK07568 aspartate aminotransf 99.9 1.2E-23 2.5E-28 219.6 30.1 340 39-501 30-392 (397)
103 PRK07682 hypothetical protein; 99.9 1.3E-23 2.9E-28 217.9 30.0 338 39-501 20-376 (378)
104 PRK06348 aspartate aminotransf 99.9 1.5E-23 3.2E-28 218.0 30.2 337 39-498 29-382 (384)
105 PTZ00377 alanine aminotransfer 99.9 7.2E-24 1.6E-28 226.5 28.6 362 27-500 65-474 (481)
106 PRK05764 aspartate aminotransf 99.9 1.3E-23 2.9E-28 218.9 29.8 340 39-500 31-390 (393)
107 PRK13355 bifunctional HTH-doma 99.9 3.1E-24 6.8E-29 231.1 25.5 344 39-500 146-513 (517)
108 PRK13392 5-aminolevulinate syn 99.9 1.5E-23 3.2E-28 219.9 29.8 338 41-501 49-397 (410)
109 PLN02880 tyrosine decarboxylas 99.9 4.2E-24 9E-29 227.1 25.7 369 39-502 81-485 (490)
110 PRK07324 transaminase; Validat 99.9 1.5E-23 3.3E-28 216.9 29.1 298 86-500 64-369 (373)
111 PLN02721 threonine aldolase 99.9 4.2E-24 9.1E-29 219.2 24.7 335 40-500 6-351 (353)
112 PRK08912 hypothetical protein; 99.9 2.2E-23 4.7E-28 216.9 29.9 345 39-500 26-385 (387)
113 PLN02187 rooty/superroot1 99.9 1.8E-23 3.9E-28 221.8 29.7 357 25-500 48-437 (462)
114 PRK08153 histidinol-phosphate 99.9 2.2E-23 4.9E-28 215.4 29.7 327 40-503 33-367 (369)
115 KOG3846 L-kynurenine hydrolase 99.9 4.1E-24 8.9E-29 202.8 21.9 396 16-502 32-462 (465)
116 PRK06358 threonine-phosphate d 99.9 3.4E-23 7.3E-28 212.9 30.7 323 40-499 20-353 (354)
117 TIGR01265 tyr_nico_aTase tyros 99.9 1.1E-23 2.3E-28 220.4 27.4 339 39-500 31-400 (403)
118 PRK09082 methionine aminotrans 99.9 1.6E-23 3.5E-28 217.9 28.2 342 39-497 30-385 (386)
119 PRK06107 aspartate aminotransf 99.9 1.9E-23 4.2E-28 218.4 28.8 346 39-502 33-401 (402)
120 PRK09148 aminotransferase; Val 99.9 4E-23 8.6E-28 216.2 30.5 339 39-499 30-388 (405)
121 PRK08363 alanine aminotransfer 99.9 2.5E-23 5.4E-28 217.3 28.7 342 39-500 30-393 (398)
122 PRK07683 aminotransferase A; V 99.9 4.8E-23 1E-27 214.4 30.7 335 39-500 28-382 (387)
123 PLN03226 serine hydroxymethylt 99.9 7.7E-23 1.7E-27 216.4 32.7 365 39-501 34-419 (475)
124 PRK03321 putative aminotransfe 99.9 2.6E-23 5.7E-28 213.6 28.3 319 39-500 22-350 (352)
125 PRK08068 transaminase; Reviewe 99.9 5E-23 1.1E-27 214.4 30.5 336 39-497 32-385 (389)
126 TIGR01821 5aminolev_synth 5-am 99.9 4.3E-23 9.4E-28 215.8 30.0 326 53-502 61-397 (402)
127 PRK06425 histidinol-phosphate 99.9 2E-23 4.3E-28 212.8 26.6 282 86-499 42-331 (332)
128 PRK09064 5-aminolevulinate syn 99.9 4.9E-23 1.1E-27 215.7 30.3 325 53-501 62-397 (407)
129 TIGR01264 tyr_amTase_E tyrosin 99.9 3.7E-23 8.1E-28 216.2 29.3 338 39-500 31-398 (401)
130 PRK13393 5-aminolevulinate syn 99.9 6.1E-23 1.3E-27 214.9 30.8 337 41-501 48-396 (406)
131 PRK09147 succinyldiaminopimela 99.9 3.6E-23 7.9E-28 215.9 28.5 355 25-499 12-394 (396)
132 PLN00145 tyrosine/nicotianamin 99.9 3.7E-23 8.1E-28 217.7 28.7 345 39-500 52-423 (430)
133 PLN02271 serine hydroxymethylt 99.9 4.6E-23 9.9E-28 215.4 28.9 370 39-500 148-539 (586)
134 PRK08064 cystathionine beta-ly 99.9 1.4E-23 3E-28 218.1 25.0 307 81-499 51-384 (390)
135 PRK14809 histidinol-phosphate 99.9 9.4E-23 2E-27 209.9 31.0 320 39-500 30-356 (357)
136 PLN02590 probable tyrosine dec 99.9 6.9E-23 1.5E-27 218.1 30.3 373 39-502 129-533 (539)
137 PRK08636 aspartate aminotransf 99.9 9.7E-23 2.1E-27 213.2 30.8 347 39-500 33-399 (403)
138 cd00616 AHBA_syn 3-amino-5-hyd 99.9 4.1E-23 9E-28 211.7 27.5 325 85-496 19-352 (352)
139 PRK07777 aminotransferase; Val 99.9 9.3E-23 2E-27 212.2 30.3 348 39-500 24-385 (387)
140 TIGR03538 DapC_gpp succinyldia 99.9 4.4E-23 9.5E-28 215.1 27.9 338 39-499 28-393 (393)
141 PRK06836 aspartate aminotransf 99.9 6.3E-23 1.4E-27 214.0 29.0 335 39-500 33-390 (394)
142 PTZ00433 tyrosine aminotransfe 99.9 5.9E-23 1.3E-27 215.4 28.9 340 39-501 33-408 (412)
143 PLN02822 serine palmitoyltrans 99.9 1.6E-22 3.5E-27 215.2 32.3 352 40-502 108-478 (481)
144 PLN02656 tyrosine transaminase 99.9 7.8E-23 1.7E-27 214.3 29.2 339 39-500 31-402 (409)
145 COG1167 ARO8 Transcriptional r 99.9 6.9E-23 1.5E-27 216.8 28.9 307 83-501 135-455 (459)
146 PRK04781 histidinol-phosphate 99.9 3.7E-23 8E-28 213.4 26.1 293 86-499 61-361 (364)
147 PLN00143 tyrosine/nicotianamin 99.9 1.3E-22 2.7E-27 212.7 30.2 357 26-500 19-403 (409)
148 PRK07550 hypothetical protein; 99.9 1.7E-22 3.7E-27 210.1 30.9 342 39-498 29-384 (386)
149 PRK09265 aminotransferase AlaT 99.9 2.4E-22 5.3E-27 210.3 32.2 343 39-500 33-400 (404)
150 TIGR01365 serC_2 phosphoserine 99.9 2.2E-22 4.8E-27 206.2 30.9 319 79-496 34-368 (374)
151 cd06502 TA_like Low-specificit 99.9 2E-23 4.3E-28 212.8 23.2 319 52-497 10-337 (338)
152 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.4E-22 3.1E-27 206.3 29.0 319 25-495 4-329 (330)
153 PRK15481 transcriptional regul 99.9 4.9E-23 1.1E-27 217.3 26.2 295 87-500 124-430 (431)
154 PRK13034 serine hydroxymethylt 99.9 2.2E-22 4.7E-27 210.9 30.5 343 47-500 35-391 (416)
155 PRK06290 aspartate aminotransf 99.9 1.5E-22 3.3E-27 211.8 29.2 339 39-500 44-404 (410)
156 PRK14808 histidinol-phosphate 99.9 2.1E-22 4.5E-27 205.4 29.5 307 39-498 19-334 (335)
157 COG0156 BioF 7-keto-8-aminopel 99.9 1.5E-22 3.3E-27 206.2 27.8 323 53-498 55-387 (388)
158 PRK07392 threonine-phosphate d 99.9 4E-22 8.8E-27 205.4 31.0 326 39-500 22-358 (360)
159 COG1168 MalY Bifunctional PLP- 99.9 6.3E-22 1.4E-26 194.8 30.3 330 52-499 39-384 (388)
160 PRK08175 aminotransferase; Val 99.9 3.1E-22 6.7E-27 208.9 29.8 346 39-500 29-388 (395)
161 PRK02610 histidinol-phosphate 99.9 4.8E-22 1E-26 205.9 31.0 328 40-501 29-371 (374)
162 TIGR03542 DAPAT_plant LL-diami 99.9 2.2E-22 4.9E-27 210.4 28.2 339 39-498 33-401 (402)
163 PRK07590 L,L-diaminopimelate a 99.9 1.7E-22 3.7E-27 211.7 27.2 345 39-498 34-408 (409)
164 PLN02450 1-aminocyclopropane-1 99.9 7.9E-23 1.7E-27 217.2 23.4 354 39-502 38-431 (468)
165 PLN02376 1-aminocyclopropane-1 99.9 1.6E-22 3.5E-27 215.8 25.3 307 86-500 96-437 (496)
166 PRK05839 hypothetical protein; 99.9 5.3E-22 1.1E-26 205.6 28.4 344 25-500 7-373 (374)
167 TIGR03539 DapC_actino succinyl 99.9 4.8E-22 1E-26 204.7 27.9 282 84-495 60-356 (357)
168 PRK03967 histidinol-phosphate 99.9 1.3E-21 2.9E-26 199.7 30.3 309 39-499 18-332 (337)
169 PRK03317 histidinol-phosphate 99.9 9.6E-22 2.1E-26 203.2 28.3 321 40-500 27-363 (368)
170 PRK08134 O-acetylhomoserine am 99.9 1.2E-21 2.6E-26 205.4 26.8 160 83-289 63-225 (433)
171 COG2008 GLY1 Threonine aldolas 99.9 6.5E-22 1.4E-26 194.4 22.9 332 42-499 2-341 (342)
172 PF00155 Aminotran_1_2: Aminot 99.9 2.1E-22 4.6E-27 207.4 20.4 298 85-495 45-363 (363)
173 PRK06855 aminotransferase; Val 99.9 1.2E-21 2.6E-26 206.7 26.5 309 86-500 75-428 (433)
174 PRK07865 N-succinyldiaminopime 99.9 2.5E-21 5.5E-26 199.8 28.3 279 88-496 66-363 (364)
175 PLN02607 1-aminocyclopropane-1 99.9 3.5E-22 7.6E-27 210.8 22.1 310 86-501 97-437 (447)
176 PRK05367 glycine dehydrogenase 99.9 1E-20 2.2E-25 213.1 35.1 357 39-504 499-878 (954)
177 PRK05968 hypothetical protein; 99.9 1.5E-21 3.2E-26 202.8 26.2 315 84-497 63-386 (389)
178 PLN02955 8-amino-7-oxononanoat 99.9 5.1E-21 1.1E-25 199.4 28.7 322 53-503 118-463 (476)
179 PLN02231 alanine transaminase 99.9 4.9E-21 1.1E-25 205.7 29.3 364 26-499 116-525 (534)
180 TIGR01329 cysta_beta_ly_E cyst 99.9 1.4E-21 3.1E-26 202.2 24.1 265 84-433 47-323 (378)
181 PLN03227 serine palmitoyltrans 99.9 1.9E-20 4E-25 194.9 32.4 348 53-503 14-384 (392)
182 KOG0257 Kynurenine aminotransf 99.9 9.9E-22 2.1E-26 195.2 21.3 322 44-438 36-386 (420)
183 TIGR03576 pyridox_MJ0158 pyrid 99.9 6.3E-21 1.4E-25 194.9 27.3 322 25-499 10-345 (346)
184 PRK07504 O-succinylhomoserine 99.9 1.2E-20 2.6E-25 196.5 29.0 353 33-496 24-394 (398)
185 PRK12566 glycine dehydrogenase 99.9 4E-21 8.8E-26 211.5 26.3 326 79-504 538-879 (954)
186 COG0076 GadB Glutamate decarbo 99.9 7.6E-21 1.6E-25 199.3 26.2 310 44-430 66-402 (460)
187 PRK13238 tnaA tryptophanase/L- 99.9 1.3E-20 2.9E-25 198.9 28.2 328 86-500 80-432 (460)
188 PRK06959 putative threonine-ph 99.9 1E-20 2.3E-25 193.2 26.5 274 87-503 56-335 (339)
189 PRK06767 methionine gamma-lyas 99.9 6.5E-21 1.4E-25 198.0 25.0 315 86-495 63-383 (386)
190 PRK07582 cystathionine gamma-l 99.9 9.5E-21 2.1E-25 195.3 25.8 295 85-497 52-365 (366)
191 PRK08133 O-succinylhomoserine 99.9 1.9E-20 4E-25 194.7 28.1 168 83-297 60-231 (390)
192 PLN02672 methionine S-methyltr 99.9 2E-20 4.4E-25 210.2 30.1 343 39-502 697-1081(1082)
193 TIGR03588 PseC UDP-4-keto-6-de 99.9 6.3E-20 1.4E-24 190.5 30.6 338 85-499 30-380 (380)
194 PRK10534 L-threonine aldolase; 99.9 6.1E-21 1.3E-25 194.5 22.2 323 43-499 3-331 (333)
195 PRK08861 cystathionine gamma-s 99.9 3.6E-20 7.8E-25 191.6 27.3 312 84-496 53-382 (388)
196 PRK06460 hypothetical protein; 99.9 3E-20 6.4E-25 192.2 26.7 247 78-406 39-298 (376)
197 PRK08114 cystathionine beta-ly 99.9 2.6E-20 5.7E-25 192.0 26.0 242 84-406 62-317 (395)
198 PRK05664 threonine-phosphate d 99.9 3.4E-20 7.4E-25 188.8 26.2 272 87-501 52-328 (330)
199 PRK11658 UDP-4-amino-4-deoxy-L 99.9 4.7E-20 1E-24 191.2 27.5 337 85-499 34-377 (379)
200 cd00615 Orn_deC_like Ornithine 99.9 1.5E-21 3.2E-26 195.7 15.6 231 83-370 58-293 (294)
201 PRK08045 cystathionine gamma-s 99.9 7.4E-20 1.6E-24 189.7 28.4 315 84-498 52-383 (386)
202 PRK09440 avtA valine--pyruvate 99.9 1E-19 2.2E-24 191.2 29.5 311 87-501 77-411 (416)
203 TIGR00474 selA seryl-tRNA(sec) 99.9 2.4E-19 5.2E-24 188.1 32.0 213 39-298 80-310 (454)
204 TIGR01324 cysta_beta_ly_B cyst 99.9 1.1E-19 2.3E-24 187.8 28.4 311 85-496 51-375 (377)
205 PF00282 Pyridoxal_deC: Pyrido 99.9 2.2E-20 4.7E-25 192.4 22.7 319 28-405 25-373 (373)
206 PRK04311 selenocysteine syntha 99.9 4.6E-19 9.9E-24 186.5 32.9 211 39-297 85-314 (464)
207 cd00614 CGS_like CGS_like: Cys 99.9 7.8E-20 1.7E-24 188.9 26.8 217 82-373 38-258 (369)
208 PRK09028 cystathionine beta-ly 99.9 6.1E-20 1.3E-24 189.8 25.6 313 86-498 63-388 (394)
209 PRK08354 putative aminotransfe 99.9 2.4E-19 5.3E-24 181.0 29.4 300 39-498 8-309 (311)
210 COG0112 GlyA Glycine/serine hy 99.9 3.9E-20 8.4E-25 182.8 22.7 348 39-501 26-390 (413)
211 TIGR03801 asp_4_decarbox aspar 99.9 4.1E-20 8.8E-25 196.2 24.5 373 39-500 94-515 (521)
212 PRK09275 aspartate aminotransf 99.9 1.8E-19 3.9E-24 191.5 29.3 369 39-501 100-517 (527)
213 TIGR01325 O_suc_HS_sulf O-succ 99.9 1E-19 2.2E-24 188.6 26.6 215 84-373 54-271 (380)
214 PRK08776 cystathionine gamma-s 99.9 1.7E-19 3.6E-24 188.1 28.1 313 84-497 60-390 (405)
215 PRK07505 hypothetical protein; 99.9 4.8E-19 1E-23 185.3 31.2 335 39-500 44-398 (402)
216 PRK07503 methionine gamma-lyas 99.9 1.5E-19 3.3E-24 188.6 27.2 168 84-297 65-235 (403)
217 PRK06234 methionine gamma-lyas 99.9 1.7E-19 3.7E-24 188.1 27.6 315 85-498 65-398 (400)
218 TIGR01328 met_gam_lyase methio 99.9 8.7E-20 1.9E-24 189.6 25.1 217 84-373 59-278 (391)
219 PRK08574 cystathionine gamma-s 99.9 1.5E-19 3.3E-24 187.3 25.9 214 84-373 53-270 (385)
220 PRK08249 cystathionine gamma-s 99.9 1E-19 2.2E-24 189.3 24.6 320 81-497 61-393 (398)
221 cd00610 OAT_like Acetyl ornith 99.9 2.2E-19 4.8E-24 188.3 27.3 347 39-498 34-412 (413)
222 PRK05939 hypothetical protein; 99.9 2.3E-19 5E-24 186.5 26.9 162 83-290 46-208 (397)
223 TIGR00461 gcvP glycine dehydro 99.9 4.7E-19 1E-23 196.6 30.8 329 79-504 525-870 (939)
224 PRK07812 O-acetylhomoserine am 99.9 2.1E-19 4.6E-24 188.3 26.5 163 84-291 69-233 (436)
225 PLN02242 methionine gamma-lyas 99.9 1.8E-19 3.9E-24 188.4 25.6 320 83-497 75-415 (418)
226 PRK07811 cystathionine gamma-s 99.8 1.9E-19 4.2E-24 187.0 25.6 311 84-495 61-386 (388)
227 PRK05613 O-acetylhomoserine am 99.8 2.2E-19 4.8E-24 188.2 26.0 162 82-289 67-231 (437)
228 KOG1368 Threonine aldolase [Am 99.8 3.6E-20 7.8E-25 175.6 17.8 339 39-502 21-370 (384)
229 PRK08248 O-acetylhomoserine am 99.8 2.6E-19 5.7E-24 187.8 26.2 161 84-290 64-226 (431)
230 TIGR02080 O_succ_thio_ly O-suc 99.8 6.9E-19 1.5E-23 182.3 28.0 262 85-431 52-327 (382)
231 PRK03244 argD acetylornithine 99.8 1.4E-18 2.9E-23 181.6 29.8 338 39-502 41-395 (398)
232 PRK07810 O-succinylhomoserine 99.8 8.8E-19 1.9E-23 182.6 27.2 240 85-406 71-324 (403)
233 PLN02509 cystathionine beta-ly 99.8 8.6E-19 1.9E-23 184.4 26.6 214 84-373 133-350 (464)
234 PRK09257 aromatic amino acid a 99.8 3.2E-19 6.8E-24 186.3 23.2 293 86-498 71-395 (396)
235 PF00464 SHMT: Serine hydroxym 99.8 1.6E-19 3.5E-24 184.5 20.2 310 39-430 20-360 (399)
236 KOG0259 Tyrosine aminotransfer 99.8 6.7E-19 1.5E-23 172.3 23.4 346 40-499 62-431 (447)
237 PTZ00376 aspartate aminotransf 99.8 2.3E-19 5E-24 187.8 21.5 297 86-501 74-403 (404)
238 PRK07671 cystathionine beta-ly 99.8 1.5E-18 3.2E-23 179.6 26.5 215 83-373 49-267 (377)
239 PRK06176 cystathionine gamma-s 99.8 1.9E-18 4.1E-23 178.9 26.2 162 83-291 49-213 (380)
240 TIGR02379 ECA_wecE TDP-4-keto- 99.8 2.8E-17 6.2E-22 170.0 33.7 331 84-499 31-375 (376)
241 cd00617 Tnase_like Tryptophana 99.8 1.1E-17 2.3E-22 174.8 30.7 327 86-501 55-408 (431)
242 PRK05994 O-acetylhomoserine am 99.8 3.7E-18 8E-23 179.3 27.2 159 85-289 64-224 (427)
243 PRK00854 rocD ornithine--oxo-a 99.8 1.8E-17 3.9E-22 173.4 31.3 326 39-499 39-399 (401)
244 COG1103 Archaea-specific pyrid 99.8 2.9E-18 6.3E-23 160.7 22.0 350 39-501 15-380 (382)
245 PRK08247 cystathionine gamma-s 99.8 4.8E-18 1E-22 175.4 25.8 233 84-405 52-288 (366)
246 PRK07050 cystathionine beta-ly 99.8 7E-18 1.5E-22 175.5 25.6 315 83-497 64-391 (394)
247 TIGR03811 tyr_de_CO2_Ent tyros 99.8 2.3E-17 5E-22 177.6 29.9 393 42-499 85-600 (608)
248 KOG1360 5-aminolevulinate synt 99.8 3.6E-18 7.7E-23 167.6 21.2 355 25-502 151-525 (570)
249 PRK06084 O-acetylhomoserine am 99.8 5.7E-18 1.2E-22 177.6 24.4 160 84-289 58-219 (425)
250 COG1932 SerC Phosphoserine ami 99.8 2.3E-17 5E-22 162.2 26.7 346 40-500 5-362 (365)
251 PRK04073 rocD ornithine--oxo-a 99.8 2.6E-17 5.7E-22 171.8 29.0 323 39-499 38-395 (396)
252 PRK05967 cystathionine beta-ly 99.8 1.1E-17 2.3E-22 172.9 25.5 313 83-496 63-390 (395)
253 TIGR00707 argD acetylornithine 99.8 6.3E-17 1.4E-21 167.8 30.9 328 39-498 25-378 (379)
254 PRK07269 cystathionine gamma-s 99.8 1.1E-17 2.5E-22 172.0 24.1 232 83-406 53-289 (364)
255 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.1E-17 4.5E-22 173.4 26.6 161 84-291 57-220 (418)
256 PRK07049 methionine gamma-lyas 99.8 1.8E-17 4E-22 173.9 26.1 224 86-373 85-312 (427)
257 PLN02368 alanine transaminase 99.8 1.2E-17 2.6E-22 174.3 23.9 249 87-404 110-395 (407)
258 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.1E-16 2.4E-21 165.9 30.8 335 84-499 31-374 (375)
259 KOG0256 1-aminocyclopropane-1- 99.8 5.5E-18 1.2E-22 167.3 19.4 313 85-500 122-460 (471)
260 PRK08637 hypothetical protein; 99.8 1.4E-17 3.1E-22 173.3 23.7 308 86-501 46-386 (388)
261 PRK06434 cystathionine gamma-l 99.8 3E-17 6.4E-22 169.4 25.3 241 82-406 62-309 (384)
262 TIGR00461 gcvP glycine dehydro 99.8 4.3E-17 9.4E-22 181.0 28.0 309 80-496 105-426 (939)
263 KOG1359 Glycine C-acetyltransf 99.8 1.1E-17 2.3E-22 158.5 19.5 324 53-504 83-415 (417)
264 cd01494 AAT_I Aspartate aminot 99.8 7.8E-18 1.7E-22 153.2 17.5 166 86-289 2-170 (170)
265 COG0399 WecE Predicted pyridox 99.8 8.2E-17 1.8E-21 163.1 26.6 331 84-500 34-372 (374)
266 PTZ00125 ornithine aminotransf 99.8 3.2E-16 7E-21 163.8 32.0 339 39-502 29-396 (400)
267 PRK06702 O-acetylhomoserine am 99.8 1.3E-16 2.8E-21 166.6 27.3 160 84-288 61-222 (432)
268 PRK01278 argD acetylornithine 99.8 2.8E-16 6.1E-21 163.7 28.8 334 39-500 29-387 (389)
269 PRK15407 lipopolysaccharide bi 99.8 7.9E-16 1.7E-20 162.0 30.7 339 85-500 64-435 (438)
270 PF01041 DegT_DnrJ_EryC1: DegT 99.8 2.8E-16 6E-21 162.2 26.8 328 84-496 25-363 (363)
271 PRK02627 acetylornithine amino 99.7 6.1E-16 1.3E-20 161.4 27.9 334 39-500 37-393 (396)
272 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 4.2E-17 9.2E-22 167.5 18.6 293 83-430 65-399 (417)
273 PLN02397 aspartate transaminas 99.7 1.6E-16 3.4E-21 167.3 22.6 297 86-500 93-420 (423)
274 TIGR03531 selenium_SpcS O-phos 99.7 7.7E-16 1.7E-20 160.6 26.1 323 82-498 103-443 (444)
275 TIGR01885 Orn_aminotrans ornit 99.7 3.6E-15 7.9E-20 156.0 30.4 331 39-499 35-400 (401)
276 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2E-15 4.3E-20 155.6 25.3 244 82-407 53-312 (386)
277 PRK02936 argD acetylornithine 99.7 2.1E-14 4.6E-19 148.9 33.2 331 39-498 27-376 (377)
278 PRK15029 arginine decarboxylas 99.7 2.1E-15 4.5E-20 165.5 25.6 239 83-373 204-465 (755)
279 COG3977 Alanine-alpha-ketoisov 99.7 1.8E-14 4E-19 137.2 27.2 318 82-500 76-410 (417)
280 PLN02624 ornithine-delta-amino 99.7 1.6E-14 3.5E-19 153.8 30.4 336 39-501 73-444 (474)
281 PRK05964 adenosylmethionine--8 99.7 4.2E-15 9E-20 156.5 25.6 347 39-501 40-422 (423)
282 KOG0634 Aromatic amino acid am 99.7 4.7E-15 1E-19 147.9 23.4 317 86-500 102-465 (472)
283 COG2873 MET17 O-acetylhomoseri 99.7 1.4E-14 3.1E-19 142.1 25.2 162 86-294 64-228 (426)
284 COG0626 MetC Cystathionine bet 99.7 1.4E-14 3E-19 147.9 25.6 315 86-496 65-393 (396)
285 PRK04260 acetylornithine amino 99.7 4.3E-14 9.3E-19 146.6 29.6 330 39-498 27-374 (375)
286 KOG2142 Molybdenum cofactor su 99.7 1.2E-16 2.7E-21 165.3 10.0 408 30-497 14-427 (728)
287 PRK13578 ornithine decarboxyla 99.7 5.7E-15 1.2E-19 160.6 23.3 253 83-385 173-446 (720)
288 KOG1383 Glutamate decarboxylas 99.7 3.3E-15 7.1E-20 150.4 19.7 274 82-430 118-412 (491)
289 TIGR02618 tyr_phenol_ly tyrosi 99.7 6E-14 1.3E-18 144.8 28.7 354 39-500 36-425 (450)
290 PRK05093 argD bifunctional N-s 99.7 8.8E-14 1.9E-18 145.6 30.4 327 39-500 38-399 (403)
291 TIGR03246 arg_catab_astC succi 99.7 1.4E-13 3.1E-18 143.7 31.0 329 39-501 33-395 (397)
292 PRK15400 lysine decarboxylase 99.6 3.9E-14 8.4E-19 154.0 25.7 322 83-500 194-558 (714)
293 PRK12381 bifunctional succinyl 99.6 1.9E-13 4.1E-18 143.2 29.2 337 39-502 37-400 (406)
294 COG4992 ArgD Ornithine/acetylo 99.6 1.5E-13 3.3E-18 138.2 27.0 335 38-501 39-398 (404)
295 PRK03715 argD acetylornithine 99.6 1.9E-13 4E-18 142.5 27.6 336 39-502 34-394 (395)
296 PRK15399 lysine decarboxylase 99.6 3.4E-13 7.3E-18 146.7 29.0 323 83-500 194-558 (713)
297 KOG1357 Serine palmitoyltransf 99.6 4.2E-14 9E-19 141.6 19.9 340 41-499 144-500 (519)
298 PF12897 Aminotran_MocR: Alani 99.6 2.2E-13 4.7E-18 135.1 22.6 360 26-502 10-416 (425)
299 KOG0633 Histidinol phosphate a 99.6 3.5E-14 7.6E-19 132.8 15.8 290 90-498 75-374 (375)
300 PRK08360 4-aminobutyrate amino 99.6 2.2E-12 4.7E-17 136.3 30.7 360 39-505 39-430 (443)
301 TIGR02407 ectoine_ectB diamino 99.6 2.6E-12 5.6E-17 134.7 30.1 351 39-500 33-411 (412)
302 PRK13237 tyrosine phenol-lyase 99.6 5.9E-12 1.3E-16 130.5 32.0 321 86-501 80-433 (460)
303 KOG0053 Cystathionine beta-lya 99.6 1E-12 2.2E-17 132.7 25.4 166 86-297 79-248 (409)
304 KOG2467 Glycine/serine hydroxy 99.6 8.9E-13 1.9E-17 128.8 24.0 354 47-501 47-426 (477)
305 PRK11522 putrescine--2-oxoglut 99.6 8.1E-13 1.8E-17 139.9 25.6 352 39-505 80-455 (459)
306 KOG2790 Phosphoserine aminotra 99.6 1.7E-12 3.7E-17 122.9 24.6 349 39-500 6-367 (370)
307 PRK08117 4-aminobutyrate amino 99.6 3.6E-12 7.9E-17 134.6 29.4 358 39-502 41-430 (433)
308 PF01212 Beta_elim_lyase: Beta 99.5 2.4E-15 5.1E-20 149.4 4.4 253 52-372 7-270 (290)
309 PLN00144 acetylornithine trans 99.5 2.3E-12 5E-17 133.8 26.6 337 39-502 13-381 (382)
310 TIGR00713 hemL glutamate-1-sem 99.5 3E-12 6.5E-17 135.0 27.5 350 39-501 46-422 (423)
311 PRK09264 diaminobutyrate--2-ox 99.5 1.6E-11 3.5E-16 129.3 32.1 351 39-503 37-418 (425)
312 TIGR03372 putres_am_tran putre 99.5 5.5E-12 1.2E-16 132.8 28.3 337 39-498 73-441 (442)
313 PF02347 GDC-P: Glycine cleava 99.5 1.2E-12 2.7E-17 134.6 21.1 279 41-372 67-364 (429)
314 COG0160 GabT 4-aminobutyrate a 99.5 1.9E-11 4.1E-16 126.5 29.0 363 39-501 54-445 (447)
315 COG0403 GcvP Glycine cleavage 99.5 1.1E-11 2.4E-16 124.3 26.1 349 43-498 79-447 (450)
316 PRK09792 4-aminobutyrate trans 99.5 1.2E-11 2.7E-16 129.9 27.7 350 39-499 38-419 (421)
317 PRK06541 hypothetical protein; 99.5 1.4E-11 3E-16 130.8 28.1 361 39-501 50-455 (460)
318 PRK06062 hypothetical protein; 99.5 4.4E-11 9.6E-16 126.7 31.7 360 39-503 51-447 (451)
319 PRK13360 omega amino acid--pyr 99.5 3.2E-11 7E-16 127.4 30.3 358 39-501 44-440 (442)
320 PRK04612 argD acetylornithine 99.5 2.7E-11 5.8E-16 126.8 29.3 338 39-501 38-403 (408)
321 PLN02760 4-aminobutyrate:pyruv 99.5 2.6E-11 5.6E-16 129.8 29.7 360 39-501 87-491 (504)
322 PRK08088 4-aminobutyrate amino 99.5 6.6E-11 1.4E-15 124.8 31.2 351 39-501 39-423 (425)
323 TIGR00700 GABAtrnsam 4-aminobu 99.5 9.9E-11 2.2E-15 123.2 32.4 356 39-500 31-419 (420)
324 PRK07495 4-aminobutyrate amino 99.5 7.9E-11 1.7E-15 123.9 31.0 355 39-502 38-422 (425)
325 PRK09221 beta alanine--pyruvat 99.5 6.1E-11 1.3E-15 125.4 29.9 360 39-502 47-444 (445)
326 PRK08593 4-aminobutyrate amino 99.5 8.8E-11 1.9E-15 124.2 30.6 358 39-503 40-431 (445)
327 PRK12403 putative aminotransfe 99.5 9.7E-11 2.1E-15 124.4 30.7 359 39-502 52-453 (460)
328 PRK06777 4-aminobutyrate amino 99.5 7.4E-11 1.6E-15 124.1 29.4 349 39-499 38-419 (421)
329 PRK06058 4-aminobutyrate amino 99.4 2.3E-10 5E-15 121.2 32.3 354 39-500 54-441 (443)
330 PRK06918 4-aminobutyrate amino 99.4 9.9E-11 2.1E-15 124.3 29.3 359 39-501 52-443 (451)
331 COG1982 LdcC Arginine/lysine/o 99.4 1.3E-11 2.7E-16 129.6 21.2 275 85-429 71-373 (557)
332 PRK07678 aminotransferase; Val 99.4 9.4E-11 2E-15 124.2 28.1 364 39-501 45-449 (451)
333 PRK05769 4-aminobutyrate amino 99.4 2.1E-10 4.5E-15 121.3 30.4 357 39-501 52-439 (441)
334 PRK07986 adenosylmethionine--8 99.4 1E-10 2.2E-15 123.0 27.8 351 39-503 41-425 (428)
335 COG1003 GcvP Glycine cleavage 99.4 1.4E-10 3E-15 116.4 26.8 323 80-504 105-450 (496)
336 PRK06105 aminotransferase; Pro 99.4 3E-10 6.4E-15 120.7 30.2 363 39-502 46-450 (460)
337 PRK00062 glutamate-1-semialdeh 99.4 1.2E-10 2.5E-15 122.9 26.8 343 39-501 48-424 (426)
338 PRK07482 hypothetical protein; 99.4 2.5E-10 5.4E-15 121.3 28.7 366 39-502 48-455 (461)
339 KOG0629 Glutamate decarboxylas 99.4 9.2E-12 2E-16 124.1 16.2 299 40-387 101-422 (510)
340 PRK06173 adenosylmethionine--8 99.4 1.7E-10 3.7E-15 121.4 26.9 347 39-501 42-425 (429)
341 KOG0628 Aromatic-L-amino-acid/ 99.4 3.7E-11 8E-16 121.1 20.2 359 42-501 75-471 (511)
342 PRK06943 adenosylmethionine--8 99.4 3.8E-10 8.2E-15 119.6 28.8 363 39-502 52-447 (453)
343 PRK05639 4-aminobutyrate amino 99.4 2.8E-10 6.1E-15 120.6 27.6 365 39-503 51-445 (457)
344 TIGR02617 tnaA_trp_ase tryptop 99.4 1.8E-10 3.9E-15 118.2 25.0 352 39-501 39-441 (467)
345 PRK00615 glutamate-1-semialdeh 99.4 3.6E-10 7.8E-15 118.9 27.7 348 39-504 51-431 (433)
346 PRK05630 adenosylmethionine--8 99.4 1.4E-10 3.1E-15 121.8 24.4 346 39-500 38-419 (422)
347 PRK07036 hypothetical protein; 99.4 1.3E-09 2.8E-14 116.0 31.8 361 39-502 49-453 (466)
348 PRK07480 putative aminotransfe 99.4 8.5E-10 1.8E-14 117.0 30.3 354 39-502 48-449 (456)
349 PRK06082 4-aminobutyrate amino 99.4 7.9E-10 1.7E-14 117.3 29.7 356 39-506 70-457 (459)
350 PRK05965 hypothetical protein; 99.4 1E-09 2.2E-14 116.7 30.3 364 39-502 44-448 (459)
351 PRK07481 hypothetical protein; 99.4 5.6E-10 1.2E-14 118.3 28.2 361 39-503 40-447 (449)
352 TIGR00699 GABAtrns_euk 4-amino 99.3 2E-10 4.4E-15 121.3 24.2 349 39-498 56-463 (464)
353 PRK06917 hypothetical protein; 99.3 1.1E-09 2.4E-14 116.0 29.5 365 39-502 29-438 (447)
354 TIGR00508 bioA adenosylmethion 99.3 5.9E-10 1.3E-14 117.4 27.3 346 39-500 43-425 (427)
355 PRK06149 hypothetical protein; 99.3 8.8E-10 1.9E-14 127.0 30.7 355 39-500 583-969 (972)
356 PRK06916 adenosylmethionine--8 99.3 5.6E-10 1.2E-14 118.6 26.7 364 39-502 54-456 (460)
357 COG0001 HemL Glutamate-1-semia 99.3 5.4E-10 1.2E-14 113.9 24.7 355 39-502 51-429 (432)
358 COG1921 SelA Selenocysteine sy 99.3 8.4E-11 1.8E-15 118.5 18.5 259 39-371 26-294 (395)
359 PRK12566 glycine dehydrogenase 99.3 5.1E-10 1.1E-14 124.5 26.1 338 42-496 82-439 (954)
360 TIGR00709 dat 2,4-diaminobutyr 99.3 1.3E-09 2.8E-14 115.4 28.1 366 39-502 37-436 (442)
361 PRK07030 adenosylmethionine--8 99.3 2.1E-09 4.5E-14 114.4 29.4 359 39-502 45-447 (466)
362 PRK04013 argD acetylornithine/ 99.3 1.9E-09 4E-14 111.0 27.8 314 39-501 22-360 (364)
363 PRK07046 aminotransferase; Val 99.3 5E-09 1.1E-13 111.0 31.1 350 39-502 73-451 (453)
364 TIGR03251 LAT_fam L-lysine 6-t 99.3 9E-10 2E-14 116.2 25.0 204 199-497 216-430 (431)
365 PRK07483 hypothetical protein; 99.3 4E-09 8.7E-14 111.5 29.8 367 39-502 28-438 (443)
366 PLN02482 glutamate-1-semialdeh 99.3 1.2E-09 2.6E-14 116.1 25.3 349 39-500 97-472 (474)
367 PRK12389 glutamate-1-semialdeh 99.3 2.5E-09 5.4E-14 112.8 27.3 346 39-500 51-426 (428)
368 PRK08742 adenosylmethionine--8 99.3 3.1E-09 6.7E-14 113.0 27.6 362 39-501 62-467 (472)
369 PRK06938 diaminobutyrate--2-ox 99.3 3.9E-09 8.5E-14 112.1 28.2 362 39-501 61-460 (464)
370 PRK08297 L-lysine aminotransfe 99.3 2.5E-09 5.3E-14 113.2 26.4 353 39-502 43-442 (443)
371 PRK06148 hypothetical protein; 99.2 4.8E-09 1E-13 121.2 28.8 358 39-501 622-1010(1013)
372 KOG1402 Ornithine aminotransfe 99.2 4.4E-09 9.5E-14 102.1 23.7 337 39-500 57-426 (427)
373 KOG0258 Alanine aminotransfera 99.2 3.9E-10 8.4E-15 111.5 16.5 333 24-437 64-442 (475)
374 PRK06931 diaminobutyrate--2-ox 99.2 5.6E-09 1.2E-13 110.9 26.4 357 39-500 56-453 (459)
375 PF03841 SelA: L-seryl-tRNA se 99.2 7.9E-12 1.7E-16 124.9 4.3 205 47-298 13-235 (367)
376 COG1448 TyrB Aspartate/tyrosin 99.1 5.4E-09 1.2E-13 104.0 18.0 346 25-497 12-394 (396)
377 PF06838 Met_gamma_lyase: Meth 99.1 1.1E-08 2.4E-13 101.4 18.7 179 86-299 56-248 (403)
378 PF05889 SLA_LP_auto_ag: Solub 99.0 1.6E-09 3.4E-14 109.4 11.6 310 89-500 61-389 (389)
379 KOG1358 Serine palmitoyltransf 99.0 3.4E-08 7.3E-13 98.1 20.1 307 81-499 136-463 (467)
380 KOG1404 Alanine-glyoxylate ami 99.0 3E-08 6.5E-13 98.6 19.6 354 34-495 43-432 (442)
381 COG0161 BioA Adenosylmethionin 99.0 1.1E-07 2.3E-12 98.4 23.5 354 38-501 41-443 (449)
382 PRK06209 glutamate-1-semialdeh 99.0 2.6E-07 5.7E-12 97.6 27.2 262 39-371 46-328 (431)
383 PF04864 Alliinase_C: Allinase 99.0 8.2E-08 1.8E-12 94.7 20.1 292 83-499 45-363 (363)
384 KOG2040 Glycine dehydrogenase 98.8 7.9E-07 1.7E-11 93.2 21.8 321 77-503 575-920 (1001)
385 PLN02974 adenosylmethionine-8- 98.8 2.8E-06 6E-11 95.5 27.0 218 200-499 583-816 (817)
386 PF00202 Aminotran_3: Aminotra 98.7 1.5E-06 3.2E-11 89.0 19.9 269 39-372 14-316 (339)
387 KOG2040 Glycine dehydrogenase 98.5 3.1E-06 6.7E-11 88.9 17.3 298 89-496 168-478 (1001)
388 COG4100 Cystathionine beta-lya 98.5 2E-06 4.4E-11 82.8 12.7 180 82-296 62-256 (416)
389 KOG1401 Acetylornithine aminot 98.5 7E-05 1.5E-09 75.5 24.0 226 39-299 54-299 (433)
390 COG3033 TnaA Tryptophanase [Am 98.4 5.7E-05 1.2E-09 74.8 21.6 329 86-501 81-444 (471)
391 KOG1403 Predicted alanine-glyo 97.7 0.0027 5.9E-08 61.7 17.2 390 5-499 6-435 (452)
392 KOG1412 Aspartate aminotransfe 97.6 0.0021 4.5E-08 62.8 15.0 276 110-503 106-407 (410)
393 KOG1405 4-aminobutyrate aminot 97.1 0.0082 1.8E-07 59.7 12.6 201 200-500 270-482 (484)
394 PLN02994 1-aminocyclopropane-1 95.7 0.024 5.1E-07 51.0 6.1 54 83-139 95-152 (153)
395 KOG2142 Molybdenum cofactor su 93.4 0.043 9.4E-07 58.7 2.1 259 5-296 90-366 (728)
396 KOG1411 Aspartate aminotransfe 92.5 0.37 7.9E-06 48.3 6.9 206 110-372 127-359 (427)
397 KOG3843 Predicted serine hydro 88.8 0.47 1E-05 45.7 3.8 153 114-302 87-253 (432)
398 COG1184 GCD2 Translation initi 57.6 73 0.0016 31.9 9.2 75 82-160 98-178 (301)
399 KOG1663 O-methyltransferase [S 45.8 2.8E+02 0.0062 26.7 11.2 127 85-255 60-188 (237)
400 PF15608 PELOTA_1: PELOTA RNA 42.2 1.8E+02 0.0038 24.1 7.6 68 87-161 22-89 (100)
401 KOG1546 Metacaspase involved i 40.8 2.1E+02 0.0046 28.9 9.3 45 208-260 169-213 (362)
402 COG0616 SppA Periplasmic serin 40.8 29 0.00062 35.1 3.6 85 199-298 95-179 (317)
403 KOG0630 Predicted pyridoxal-de 36.4 2.1E+02 0.0046 30.6 9.0 161 182-387 275-442 (838)
404 PRK08535 translation initiatio 32.3 1.6E+02 0.0035 29.6 7.4 56 105-161 122-180 (310)
405 TIGR00511 ribulose_e2b2 ribose 30.9 1.9E+02 0.0041 29.0 7.6 56 105-161 117-175 (301)
406 PRK07708 hypothetical protein; 28.1 3.8E+02 0.0082 25.5 8.8 100 199-352 39-139 (219)
407 COG2870 RfaE ADP-heptose synth 26.1 62 0.0013 33.7 3.1 115 97-249 63-177 (467)
408 PLN02589 caffeoyl-CoA O-methyl 25.8 6.2E+02 0.013 24.5 10.8 42 200-256 155-196 (247)
409 PF01008 IF-2B: Initiation fac 23.8 2.8E+02 0.006 27.2 7.4 73 86-162 90-168 (282)
410 PF02686 Glu-tRNAGln: Glu-tRNA 23.4 82 0.0018 23.8 2.8 24 484-507 2-25 (72)
411 PRK08335 translation initiatio 21.5 6.7E+02 0.015 24.8 9.3 56 105-161 111-169 (275)
412 COG0156 BioF 7-keto-8-aminopel 20.8 8E+02 0.017 25.6 10.2 68 201-286 144-223 (388)
413 TIGR02990 ectoine_eutA ectoine 20.6 3.2E+02 0.007 26.3 6.8 81 111-209 106-189 (239)
No 1
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=4.6e-61 Score=538.33 Aligned_cols=469 Identities=67% Similarity=1.114 Sum_probs=394.1
Q ss_pred HHHHHHHhcccCCCCCCCCchHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHH
Q 010538 6 KEEFLKEFGEDYGYPNAPKSIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDI 85 (508)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (508)
+..||.+|.+.|.++..+.+++.+|..+||.+ ++++||||++++++++.++++++..+..+.++||++.+..+..+.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~fp~l-~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~ 79 (805)
T PLN02724 1 KESFLKEFGGYYGYPDGPKPIDELRATEFARL-KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDT 79 (805)
T ss_pred ChhHHhhhcccCCcccchhhHHHHHHHHhhhc-CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHH
Confidence 35799999988999887778999995589999 78999999999998888888877777777788999766667778889
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC---
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE--- 162 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~--- 162 (508)
++++|+.+|+++|+++++|+|+||+|+|+|+++++.++.+++|++|+++..+|+++..|.+.+++.|++++.++++.
T Consensus 80 ~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~ 159 (805)
T PLN02724 80 IESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAAN 159 (805)
T ss_pred HHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccc
Confidence 99999999999999887567999999999999999999889999999999999999999888888999999998862
Q ss_pred -----ccCccccccccccccccccchhhhhcCCCC----CCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccc
Q 010538 163 -----AVDNDGLSESLVTSTKISLLPIQRRKGASF----PERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERI 233 (508)
Q Consensus 163 -----~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l----~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~ 233 (508)
.+.++ .+.++++ +.+ ......+++|++|+++|++|.||.++|++.|..+++.
T Consensus 160 ~~~~~~g~~~-------------~~~~~l~--~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~---- 220 (805)
T PLN02724 160 QPTNSQGSVV-------------VKSRGLQ--RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDN---- 220 (805)
T ss_pred cccccccccc-------------cchhhhh--hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHh----
Confidence 22221 0123444 322 1111124678999999999999999999987665552
Q ss_pred cccCCCCCC-----CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEe
Q 010538 234 LEISPFSKG-----RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAA 308 (508)
Q Consensus 234 ~~~~~~~~~-----g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~ 308 (508)
+..+ ++++++|++|++|+.|+|+.++++||+++|+|||+|+|.|+|+||++++.++.+.|.++||+++..
T Consensus 221 -----~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~ 295 (805)
T PLN02724 221 -----QHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAA 295 (805)
T ss_pred -----cccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEE
Confidence 1111 478999999999999999999999999999999999999999999999998889999999877654
Q ss_pred cccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCC
Q 010538 309 SIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYT 388 (508)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~ 388 (508)
+.....+.......+.+++.||+|+++++++.+|++++.+.|++.+.+|+..|++++.+.|++++|.++.++++++++..
T Consensus 296 ~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~ 375 (805)
T PLN02724 296 SIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHT 375 (805)
T ss_pred EecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCC
Confidence 43322232122335789999999999999999999999999999999999999999999999998777777899998742
Q ss_pred CCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccC
Q 010538 389 SEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIH 468 (508)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 468 (508)
...+...++++++|++.+.++..+++.++.+++.++||.+|.|++|+++.++.+||+++..+...+..+|.|++..+.++
T Consensus 376 ~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~ 455 (805)
T PLN02724 376 FKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIH 455 (805)
T ss_pred CCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheec
Confidence 10011246899999999988887888888888889999999999999999988999988888888889999999999998
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 469 GKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 469 ~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
+...|.||+|+++|||.+||++|+++|+++.
T Consensus 456 ~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 456 GRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred CcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 8767999999999999999999999999854
No 2
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-59 Score=482.23 Aligned_cols=393 Identities=25% Similarity=0.304 Sum_probs=342.3
Q ss_pred CchHHHHHHhhccCCC----CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcC
Q 010538 24 KSIDQIRATEFKRLEN----GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFN 98 (508)
Q Consensus 24 ~~~~~~r~~~f~~~~~----~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~ 98 (508)
+++..+|+ +||.+.+ +++|||++++++.|..+++++.+ +...+++|++. .+..+....+.++++|+.+|+++|
T Consensus 3 ~~~~~~r~-~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~-~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~ 80 (405)
T COG0520 3 FDVAAVRA-DFPALKREVGKPLVYLDNAATSQKPQAVLDAVAE-YYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN 80 (405)
T ss_pred CChHHHHh-hCHHHhhccCCCeEEecCcccccCCHHHHHHHHH-HHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC
Confidence 56788998 9999954 36999999999988888888754 55567788885 456677788899999999999999
Q ss_pred CCC-CCceEEEcCChHHHHHHHHhhcC--CCCCCeEEEecccccch-HHHHHHHHhcCCeEEEEccCCccCccccccccc
Q 010538 99 ASM-KDYKCIFTSGATAALKLVGEAFP--WSHQSSYMYTMENHNSV-LGIREYALSQGAAAFAIDVEEAVDNDGLSESLV 174 (508)
Q Consensus 99 ~~~-~~~~i~~t~g~t~al~~~~~~l~--~~~g~~vl~~~~~h~s~-~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~ 174 (508)
+++ + +|+||+|+|+|++++..++. +++|++||+++.||++. .+|....++.|++++++|+++++.+
T Consensus 81 a~~~~--eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~-------- 150 (405)
T COG0520 81 ADSSD--EIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLL-------- 150 (405)
T ss_pred CCCCC--eEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCc--------
Confidence 995 7 89999999999999999996 68889999999998875 5666677778999999999877777
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC 254 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~ 254 (508)
+.++++ . .++++|++|+++|++|.||.+.|+++|.++||+ +|++++||++|++
T Consensus 151 -------~~~~~~--~------~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~------------~ga~v~VDaaq~~ 203 (405)
T COG0520 151 -------DLDALE--K------LITPKTKLVALSHVSNVTGTVNPVKEIAELAHE------------HGALVLVDAAQAA 203 (405)
T ss_pred -------CHHHHH--H------hcCCCceEEEEECccccccccchHHHHHHHHHH------------cCCEEEEECcccc
Confidence 577888 3 347899999999999999999999999999998 9999999999999
Q ss_pred CCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 255 VTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 255 g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
|+.|+|+.++++||+++|+|||++||.|+|+||+++++++.+.|...||++.........+ .....+.+++.||||+.
T Consensus 204 ~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~--~~~~~p~rfe~gTpn~~ 281 (405)
T COG0520 204 GHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGV--TLAELPLRFEAGTPNIA 281 (405)
T ss_pred CccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccc--cccCcchhhccCCchHH
Confidence 9999999999999999999997666999999999999999999999988876654431111 12356899999999999
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
+.+++.+|++++.++|++.+.++.++|++++.+.|+++ +++++++++. .++.++++|.+++. +.
T Consensus 282 ~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~------~~v~i~g~~~-----~~r~~~vsF~v~~~-----~~ 345 (405)
T COG0520 282 GAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSEL------PGVEIYGPPD-----ADRGGIVSFNVKGI-----HP 345 (405)
T ss_pred HHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC------CCeEEecCCc-----ccCceEEEEEeCCC-----CH
Confidence 99999999999999999999999999999999999999 4799999875 13589999999885 44
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
.++.+.|.++||.++.|++|+.+. ++.+++ .+.+|+|+++|||.||||+|+++
T Consensus 346 ~dv~~~L~~~gI~vr~g~~ca~p~-~~~~~~--------------------------~~~iR~S~~~YNt~edid~l~~a 398 (405)
T COG0520 346 HDVATLLDEKGIAVRAGHHCAQPL-HRLLGV--------------------------DATIRASLHLYNTEEDVDRLLEA 398 (405)
T ss_pred HHHHHHHHhCCeEEEeccccccHH-HHhcCC--------------------------CCceEEEEeecCCHHHHHHHHHH
Confidence 569999999999999999999886 455554 45699999999999999999999
Q ss_pred hhhhhh
Q 010538 495 SFDFVN 500 (508)
Q Consensus 495 ~~~~~~ 500 (508)
|+++.+
T Consensus 399 L~~~~~ 404 (405)
T COG0520 399 LKKALA 404 (405)
T ss_pred HHHHhh
Confidence 998764
No 3
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-57 Score=452.92 Aligned_cols=375 Identities=23% Similarity=0.286 Sum_probs=339.5
Q ss_pred CeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHH
Q 010538 41 TVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVG 120 (508)
Q Consensus 41 ~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~ 120 (508)
+|||||++++++.|.++++++..+ ...|+||.+.+..|+.....++.+|+.+|+++|+++. +|+||+|+||++|+++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~-~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~--eIiFTSG~TEsnNlaI 78 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYL-TEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE--EIIFTSGATESNNLAI 78 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHH-HhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEecCCcHHHHHHH
Confidence 689999999999999999987744 5669999999999999999999999999999999998 9999999999999999
Q ss_pred hh--cCC---CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 121 EA--FPW---SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 121 ~~--l~~---~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
.+ ... +.+.+|+++..||++++...++++..|.+|.++|++.++.+ |+++++ ++|
T Consensus 79 ~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v---------------~~e~L~--~al--- 138 (386)
T COG1104 79 KGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLV---------------DLEQLE--EAL--- 138 (386)
T ss_pred HhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeE---------------cHHHHH--Hhc---
Confidence 88 322 24789999999999999999999889999999999999988 799999 666
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYK 275 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K 275 (508)
.++|.+|++.++||.+|++.|+++|.++|++ +|+++++|++|++|..|+|+.++++|++++|+||
T Consensus 139 ---~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~------------~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK 203 (386)
T COG1104 139 ---RPDTILVSIMHANNETGTIQPIAEIGEICKE------------RGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK 203 (386)
T ss_pred ---CCCceEEEEEecccCeeecccHHHHHHHHHH------------cCCeEEEehhhhcCceeccccccCcceEEeehhh
Confidence 5789999999999999999999999999998 8999999999999999999999999999999999
Q ss_pred cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHH
Q 010538 276 IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAIC 355 (508)
Q Consensus 276 ~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~ 355 (508)
++| |.|+|+||+++.. ++.|.+.||++ ++.+++||.|+++++++..|++...+ .++...
T Consensus 204 ~~G-pkGiGaLyv~~~~--~~~p~i~GGgQ-----------------E~g~RsGTenv~~Ivg~~~A~~~a~~-~~~~~~ 262 (386)
T COG1104 204 FGG-PKGIGALYVRPGV--RLEPLIHGGGQ-----------------ERGLRSGTENVPGIVGFGKAAEIAVE-ELEEEN 262 (386)
T ss_pred ccC-CCceEEEEECCCC--ccCceeccCcC-----------------CCCCCCCCccHHHHHHHHHHHHHHHH-HHHHHH
Confidence 999 9999999997776 38899999987 88899999999999999999998655 488899
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCC
Q 010538 356 RHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCN 435 (508)
Q Consensus 356 ~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~ 435 (508)
.++..++++|.+.|.+.. |.+.+.+.... +.+++++|.+++.+++. +.-.|+.+||.+++|+.|+
T Consensus 263 ~~~~~lr~~l~~~l~~~~-----p~~~~~g~~~~-----rlP~~~~~~f~gv~gE~-----ll~~L~~~gI~vStGSACs 327 (386)
T COG1104 263 ARLRKLRDRLEDGLLEII-----PDVYLNGDDEP-----RLPNILNFSFPGVEGES-----LLLALDLAGIAVSTGSACS 327 (386)
T ss_pred HHHHHHHHHHHHHHHhcC-----CcEEEcCCccc-----CCCCeEEEEeCCCcHHH-----HHHhccccCeEEecccccc
Confidence 999999999999998762 47888877643 56999999999987765 7888999999999999999
Q ss_pred chHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhhc
Q 010538 436 PGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQFL 505 (508)
Q Consensus 436 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~~ 505 (508)
++.. .+|++|.|||..+ ....+.||||++.+||++||+++++.+.+.++.++.+
T Consensus 328 S~~~------~pShVL~AmG~~~----------e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 328 SGSL------EPSHVLRAMGISE----------ELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred CCCC------CccHHHHHcCCCh----------HHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 9863 7999999999853 3467899999999999999999999999999998764
No 4
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.4e-50 Score=423.73 Aligned_cols=391 Identities=21% Similarity=0.269 Sum_probs=320.8
Q ss_pred CchHHHHHHhhccCCC-----CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHc
Q 010538 24 KSIDQIRATEFKRLEN-----GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYF 97 (508)
Q Consensus 24 ~~~~~~r~~~f~~~~~-----~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~ 97 (508)
.+++.+|. +||.+.+ +++|||+++++++++.+++++.+ ++...+.|+++ .+..+....+..+++|+.+|+++
T Consensus 3 ~~~~~~r~-~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 80 (406)
T PRK09295 3 FSVEKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAE-FYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80 (406)
T ss_pred CChHHHHh-hCccccCcCCCCceEEEeCcccccCCHHHHHHHHH-HHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence 35678998 9999932 48999999999999999988755 55555667754 44456667888999999999999
Q ss_pred CC-CCCCceEEEcCChHHHHHHHHhhc---CCCCCCeEEEecccccch-HHHHHHHHhcCCeEEEEccCCccCccccccc
Q 010538 98 NA-SMKDYKCIFTSGATAALKLVGEAF---PWSHQSSYMYTMENHNSV-LGIREYALSQGAAAFAIDVEEAVDNDGLSES 172 (508)
Q Consensus 98 ~~-~~~~~~i~~t~g~t~al~~~~~~l---~~~~g~~vl~~~~~h~s~-~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~ 172 (508)
|+ +++ +|+||+|+|+++++++.++ .+++|++|+++..+|++. ..|...++..|++++.+|.+.++.+
T Consensus 81 ~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~------ 152 (406)
T PRK09295 81 NARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTL------ 152 (406)
T ss_pred CcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCC------
Confidence 98 566 8999999999999999886 357899999999999865 4566667778999999998766555
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccc
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAK 252 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~ 252 (508)
|+++++ +++ +++|++|++++++|+||.++|+++|.++|++ +|+++++|++|
T Consensus 153 ---------d~~~l~--~~i------~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~------------~~~~vivD~a~ 203 (406)
T PRK09295 153 ---------QLETLP--ALF------DERTRLLAITHVSNVLGTENPLAEMIALAHQ------------HGAKVLVDGAQ 203 (406)
T ss_pred ---------CHHHHH--Hhc------CCCcEEEEEecchhcccccCCHHHHHHHHHH------------cCCEEEEEccc
Confidence 578888 554 4678999999999999999999999999998 89999999999
Q ss_pred cCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCC
Q 010538 253 GCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTAS 332 (508)
Q Consensus 253 ~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 332 (508)
+.|..++|+.++++|++++|+||++| |.|+|+++++++.++.+.|...|++..........+ .....+.+++.||+|
T Consensus 204 ~~g~~~~~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~r~e~GT~~ 280 (406)
T PRK09295 204 AVMHHPVDVQALDCDFYVFSGHKLYG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGT--TWAKAPWRFEAGTPN 280 (406)
T ss_pred ccCccccCchhcCCCEEEeehhhccC-CCCcEEEEEchHhHhhCCCcccCCceeeeeecCCcc--ccCCchhhcCCCCcc
Confidence 99999999999999999999999888 999999999999988776654433322211111111 112346789999999
Q ss_pred hhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc
Q 010538 333 FLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF 412 (508)
Q Consensus 333 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 412 (508)
+.+++++.+|++++.+.|++.+++++.++++++++.|+++ ++++++++.. +.++++|.+++.+
T Consensus 281 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~------~~~~~~~~~~-------~~~iv~~~~~~~~---- 343 (406)
T PRK09295 281 TGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV------PDLTLYGPQN-------RLGVIAFNLGKHH---- 343 (406)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------CCEEEeCCCC-------CceEEEEEECCcC----
Confidence 9999999999999999999999999999999999999988 4799987642 3789999987643
Q ss_pred CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHH
Q 010538 413 GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNR 492 (508)
Q Consensus 413 ~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~ 492 (508)
..++.+.|.++||.++.|+.|+.+. +.++|. ++.+|+|+|+|||++|||+++
T Consensus 344 -~~~~~~~L~~~gI~v~~g~~c~~~~------------~~~~~~---------------~~~iRiS~~~ynt~~did~l~ 395 (406)
T PRK09295 344 -AYDVGSFLDNYGIAVRTGHHCAMPL------------MAYYNV---------------PAMCRASLAMYNTHEEVDRLV 395 (406)
T ss_pred -HHHHHHHHHhCCeEEeccccchHHH------------HHHHCC---------------CCEEEEEccCCCCHHHHHHHH
Confidence 3458888999999999999998653 223322 578999999999999999999
Q ss_pred Hhhhhhhhh
Q 010538 493 CSSFDFVNF 501 (508)
Q Consensus 493 ~~~~~~~~~ 501 (508)
++|+++..+
T Consensus 396 ~~l~~i~~~ 404 (406)
T PRK09295 396 AGLQRIHRL 404 (406)
T ss_pred HHHHHHHHH
Confidence 999987654
No 5
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.3e-49 Score=415.83 Aligned_cols=392 Identities=22% Similarity=0.281 Sum_probs=323.1
Q ss_pred CCchHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCC-C
Q 010538 23 PKSIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNA-S 100 (508)
Q Consensus 23 ~~~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~-~ 100 (508)
+.+++.+|+ +||.+.++++|||+++++++|+.+++++.+ ++.+.++++++ .+..+..+.+.++++|+.+|+++|+ +
T Consensus 3 ~~~~~~~r~-~fp~l~~~~~yld~a~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~ 80 (401)
T PRK10874 3 VFNPAQFRA-QFPALQDAGVYLDSAATALKPQAVIEATQQ-FYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPD 80 (401)
T ss_pred CCCHHHHHH-hCCCcCCceEEEeCCcccCCCHHHHHHHHH-HHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 346788998 999875579999999999999999988755 55666677764 4445667788999999999999999 6
Q ss_pred CCCceEEEcCChHHHHHHHHhhc---CCCCCCeEEEecccccch-HHHHHHHHhcCCeEEEEccCCccCccccccccccc
Q 010538 101 MKDYKCIFTSGATAALKLVGEAF---PWSHQSSYMYTMENHNSV-LGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTS 176 (508)
Q Consensus 101 ~~~~~i~~t~g~t~al~~~~~~l---~~~~g~~vl~~~~~h~s~-~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~ 176 (508)
++ +|++|+|+|+++++++.++ .+++|++||+++.+|++. ..|...++..|++++.+|.+.++.+
T Consensus 81 ~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~---------- 148 (401)
T PRK10874 81 AK--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLP---------- 148 (401)
T ss_pred CC--EEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcC----------
Confidence 77 8999999999999999998 357899999999999985 4566667788999999998765544
Q ss_pred cccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC
Q 010538 177 TKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT 256 (508)
Q Consensus 177 ~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~ 256 (508)
|+++++ +++ +++|++|++++++|+||.++|+++|.++|++ +|+++++|++|+.|.
T Consensus 149 -----d~~~l~--~~i------~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~------------~g~~~ivD~a~~~g~ 203 (401)
T PRK10874 149 -----DVDLLP--ELI------TPRTRILALGQMSNVTGGCPDLARAITLAHQ------------AGMVVMVDGAQGAVH 203 (401)
T ss_pred -----CHHHHH--Hhc------CcCcEEEEEeCCcccccCcCCHHHHHHHHHH------------cCCEEEEECCccccc
Confidence 688888 554 5789999999999999999999999999998 899999999999999
Q ss_pred CCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 257 QPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 257 ~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
.++++..+++|++++|+||++| |.|+|+++++++.++.+.+...++..... .....+. ....+.+++.||+|++.+
T Consensus 204 ~~~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~e~Gt~~~~~~ 279 (401)
T PRK10874 204 FPADVQALDIDFYAFSGHKLYG-PTGIGVLYGKSELLEAMSPWQGGGKMLTE-VSFDGFT--PQSAPWRFEAGTPNVAGV 279 (401)
T ss_pred ccCCchhcCCCEEEEecccccC-CCccEEEEEchHHHhcCCCeecCCcceEe-eccCccC--CCCChhhccCCCcCHHHH
Confidence 9999998899999999999888 99999999999998888775433321111 0000111 123467899999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHH
Q 010538 337 ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYRE 416 (508)
Q Consensus 337 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 416 (508)
+++.+|++++.+.|.+.+++++.++++++++.|+++ ++++++.++. .++++|.+++. +..+
T Consensus 280 ~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~------~g~~~~~~~~--------~~i~~~~~~~~-----~~~~ 340 (401)
T PRK10874 280 IGLSAALEWLADIDINQAESWSRSLATLAEDALAKL------PGFRSFRCQD--------SSLLAFDFAGV-----HHSD 340 (401)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------CCEEEeCCCC--------CcEEEEEECCc-----CHHH
Confidence 999999999999999999999999999999999987 4788876543 67899988653 3345
Q ss_pred HHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 417 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 417 l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
+.+.|.++||.+++|..|+.+. +.++|. .+++|+|+++|||.+||++++++|+
T Consensus 341 ~~~~L~~~gI~v~~g~~~~~~~------------~~~~g~---------------~~~iRiS~~~~nt~edid~ll~al~ 393 (401)
T PRK10874 341 LVTLLAEYGIALRAGQHCAQPL------------LAALGV---------------TGTLRASFAPYNTQSDVDALVNAVD 393 (401)
T ss_pred HHHHHHHCCcEEeccccchHHH------------HHHhCC---------------CCEEEEEecccCCHHHHHHHHHHHH
Confidence 8889999999999999887543 223322 5789999999999999999999999
Q ss_pred hhhhhhh
Q 010538 497 DFVNFSQ 503 (508)
Q Consensus 497 ~~~~~~~ 503 (508)
++++.+.
T Consensus 394 ~~~~~~~ 400 (401)
T PRK10874 394 RALELLV 400 (401)
T ss_pred HHHHHhc
Confidence 9877653
No 6
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.9e-49 Score=414.12 Aligned_cols=389 Identities=22% Similarity=0.319 Sum_probs=318.8
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCC-CC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNAS-MK 102 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~-~~ 102 (508)
+++.+|+ +||.+.++++|||+++++++|+.+++++.+ ++....++++. .+..+....+.++++|+.+|+++|++ ++
T Consensus 2 ~~~~~r~-~fp~l~~~~iyld~a~~~~~p~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~ 79 (398)
T TIGR03392 2 NPAQFRQ-QFPALQDGTVYLDSAATALKPQAVIDATQQ-FYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE 79 (398)
T ss_pred ChhHHHH-hCCccCCCeEEeeCccccCCCHHHHHHHHH-HHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4577998 999884569999999999999999988755 54455667753 34445566788999999999999995 67
Q ss_pred CceEEEcCChHHHHHHHHhhc---CCCCCCeEEEecccccch-HHHHHHHHhcCCeEEEEccCCccCccccccccccccc
Q 010538 103 DYKCIFTSGATAALKLVGEAF---PWSHQSSYMYTMENHNSV-LGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTK 178 (508)
Q Consensus 103 ~~~i~~t~g~t~al~~~~~~l---~~~~g~~vl~~~~~h~s~-~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~ 178 (508)
+|++|+|+|+++++++.++ .+++|++|+++..+|++. ..|...++..|++++.+|.+.++.+
T Consensus 80 --~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~------------ 145 (398)
T TIGR03392 80 --NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLP------------ 145 (398)
T ss_pred --eEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCc------------
Confidence 8999999999999999998 357899999999999985 4466667788999999998765544
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP 258 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~ 258 (508)
|+++++ +++ +++|++|++++++|+||.+.|+++|.++|++ +|+++++|++|+.|..+
T Consensus 146 ---~~~~l~--~~i------~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~------------~~~~~ivD~a~~~~~~~ 202 (398)
T TIGR03392 146 ---DIRQLP--ELL------TPRTRILALGQMSNVTGGCPDLARAITLAHQ------------YGAVVVVDGAQGVVHGP 202 (398)
T ss_pred ---CHHHHH--HHh------ccCceEEEEECccccccccCCHHHHHHHHHH------------cCCEEEEEhhhhcCCCC
Confidence 578888 554 5678999999999999999999999999998 89999999999999999
Q ss_pred CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHH
Q 010538 259 PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIAS 338 (508)
Q Consensus 259 ~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~ 338 (508)
+++..+++|++++|+||++| |.|+|+++++++.++.+.+.. +|+..........+ .....+.+++.||+|++++++
T Consensus 203 ~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~e~GT~~~~~~~a 278 (398)
T TIGR03392 203 PDVQALDIDFYAFSGHKLYG-PTGIGVLYGKTELLEAMPPWQ-GGGKMLSHVSFDGF--IPQAVPHRFEAGTPNIAGVIG 278 (398)
T ss_pred CChhhcCCCEEEEecccccC-CCceEEEEEcHHHHhhCCCee-cCCceEeecccccc--ccCCChhhccCCCCCHHHHHH
Confidence 99998899999999999888 999999999999988887654 44332111111111 112346789999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHH
Q 010538 339 IRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVE 418 (508)
Q Consensus 339 l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 418 (508)
+.++++++.+.|++++.+++.++++++++.|+++ ++++++.++. .++++|.+++.+ ..++.
T Consensus 279 ~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l------~g~~~~~~~~--------~~i~~~~~~~~~-----~~~l~ 339 (398)
T TIGR03392 279 LSAALEWLTDIDIAAAEAWSVSLADLAEERLAQL------PGFRSFRCPG--------SSLLAFDFAGVH-----HSDLA 339 (398)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------CCeEEeCCCC--------CcEEEEEeCCcC-----HHHHH
Confidence 9999999999999999999999999999999987 4788776543 689999886543 34588
Q ss_pred HHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 419 KLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 419 ~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
+.|.++||.++.|+.|+.+. +.++|. +++||+|+|+|||.+||++++++|+++
T Consensus 340 ~~L~~~gI~v~~g~~~~~~~------------~~~~g~---------------~~~iRvS~~~~~t~~ei~~l~~~l~~~ 392 (398)
T TIGR03392 340 ALLAESGIALRAGQHCAQPL------------MAALGV---------------SGTLRASFAPYNTQQDVDALVDAVGAA 392 (398)
T ss_pred HHHHhCCEEEecCccchHHH------------HHHhCC---------------CCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence 89999999999999997543 223322 579999999999999999999999988
Q ss_pred hhhh
Q 010538 499 VNFS 502 (508)
Q Consensus 499 ~~~~ 502 (508)
++.+
T Consensus 393 ~~~~ 396 (398)
T TIGR03392 393 LELL 396 (398)
T ss_pred HHHh
Confidence 7754
No 7
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=8.5e-49 Score=412.48 Aligned_cols=397 Identities=22% Similarity=0.294 Sum_probs=321.3
Q ss_pred HHHHHHhhccCCC-----CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCC
Q 010538 27 DQIRATEFKRLEN-----GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNAS 100 (508)
Q Consensus 27 ~~~r~~~f~~~~~-----~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~ 100 (508)
..+|. +||.+++ +++|||+++++++|+.+++++.+ ++.+.+.++.. .+..+....+.++++|+.+++++|++
T Consensus 15 ~~~r~-~fp~~~~~~~~~~~iyLd~a~~~~~p~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~ 92 (424)
T PLN02855 15 AETRP-DFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQD-YYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS 92 (424)
T ss_pred HHHHH-hCchhccccCCCCeEEeeCccccCCCHHHHHHHHH-HHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC
Confidence 35788 9999842 48999999999999999888755 54555666654 33344455677889999999999996
Q ss_pred -CCCceEEEcCChHHHHHHHHhhc---CCCCCCeEEEecccccchH-HHHHHHHhcCCeEEEEccCCccCcccccccccc
Q 010538 101 -MKDYKCIFTSGATAALKLVGEAF---PWSHQSSYMYTMENHNSVL-GIREYALSQGAAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 101 -~~~~~i~~t~g~t~al~~~~~~l---~~~~g~~vl~~~~~h~s~~-~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++ +|+||+|+|+++++++.++ .+++|++|+++..+|++.. .|...++..|++++.++++.++.+
T Consensus 93 ~~~--~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~--------- 161 (424)
T PLN02855 93 TSR--EIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVL--------- 161 (424)
T ss_pred CCC--EEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCc---------
Confidence 46 8999999999999999875 3578999999999999765 455566778999999998765545
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV 255 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g 255 (508)
|+++++ +++ +++|++|++++++|+||.++|+++|.++|++ +|+++++|++|+.|
T Consensus 162 ------~~~~l~--~~i------~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~------------~g~~vivD~a~~~g 215 (424)
T PLN02855 162 ------DVEQLK--ELL------SEKTKLVATHHVSNVLGSILPVEDIVHWAHA------------VGAKVLVDACQSVP 215 (424)
T ss_pred ------CHHHHH--HHh------ccCceEEEEeCccccccccCCHHHHHHHHHH------------cCCEEEEEhhhhcC
Confidence 578888 554 4688999999999999999999999999998 89999999999999
Q ss_pred CCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhH
Q 010538 256 TQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLS 335 (508)
Q Consensus 256 ~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 335 (508)
..++|+.++++|++++|+||++| |.|+|+++++++.++.+.|...||........ ... .....+.+++.||+++..
T Consensus 216 ~~~~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~--~~~-~~~~~~~r~e~GT~~~~~ 291 (424)
T PLN02855 216 HMPVDVQTLGADFLVASSHKMCG-PTGIGFLWGKSDLLESMPPFLGGGEMISDVFL--DHS-TYAPPPSRFEAGTPAIGE 291 (424)
T ss_pred CcCCCchhcCCCEEEeecccccC-CCccEEEEEchhhhhcCCCEecCCCceeeeec--Ccc-ccCCChhhccCCChHHHH
Confidence 99999999999999999999877 99999999999998888776655543221110 000 112236789999999999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHH
Q 010538 336 IASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYR 415 (508)
Q Consensus 336 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 415 (508)
++++.++++++.+.|++++++++.++++++++.|+++ ++++++++.... +..++++++|.+++.+ ..
T Consensus 292 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~------~g~~i~~~~~~~--~~~r~~~v~~~~~~~~-----~~ 358 (424)
T PLN02855 292 AIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV------PGVRIYGPKPSE--GVGRAALCAFNVEGIH-----PT 358 (424)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------CCEEEeCCCccc--ccCcccEEEEEECCcC-----HH
Confidence 9999999999999999999999999999999999987 479999864310 0234789999987643 34
Q ss_pred HHHHHHhhC-CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 416 EVEKLASLS-GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 416 ~l~~~L~~~-gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
++.+.|.++ ||.++.|++|+.+. ++.+|+ ++++|+|+|+|||++||+++++.
T Consensus 359 ~v~~~L~~~~gI~v~~g~~c~~~~-~~~~g~--------------------------~~~iRiS~~~ynt~~di~~l~~~ 411 (424)
T PLN02855 359 DLSTFLDQQHGVAIRSGHHCAQPL-HRYLGV--------------------------NASARASLYFYNTKEEVDAFIHA 411 (424)
T ss_pred HHHHHhcccCCEEEechhhhhHHH-HHHhCC--------------------------CCeEEEEeccCCCHHHHHHHHHH
Confidence 588888777 99999999998653 233332 47899999999999999999999
Q ss_pred hhhhhhhhhhcc
Q 010538 495 SFDFVNFSQFLN 506 (508)
Q Consensus 495 ~~~~~~~~~~~~ 506 (508)
|+++++.++.+.
T Consensus 412 l~~~~~~~~~~~ 423 (424)
T PLN02855 412 LKDTIAFFSSFK 423 (424)
T ss_pred HHHHHHHHHhhc
Confidence 999988776553
No 8
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-48 Score=389.92 Aligned_cols=377 Identities=23% Similarity=0.261 Sum_probs=317.7
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.+.+|||+++++++++.|+.++.. ++.+.++||++. ..+|+....++++|+.+|+++|+++. +|+||+|+|+++|+
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~-~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~--dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLP-YLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPS--DIVFTSGATESNNL 117 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHH-HHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCC--cEEEeCCchHHHHH
Confidence 589999999999999999999755 667889999987 55777788899999999999999999 89999999999999
Q ss_pred HHhhcCCCCCC----eEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 119 VGEAFPWSHQS----SYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 119 ~~~~l~~~~g~----~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
++.++.+..++ +||+...+|+++..+++.++..|++|+.+|++..+.. |.++++ ++|
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~---------------d~~~~~--~~i-- 178 (428)
T KOG1549|consen 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLV---------------DISKLR--EAI-- 178 (428)
T ss_pred HHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccc---------------cHHHHH--Hhc--
Confidence 99999887777 9999999999999999999999999999999865555 688888 555
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecc
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFY 274 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~ 274 (508)
+++|++|.+.+++|.+|.++|+++|.++|++ .|+.+++|+||+.|++++|+.++++||+++|+|
T Consensus 179 ----~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~------------~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~H 242 (428)
T KOG1549|consen 179 ----RSKTRLVSIMHVNNEIGVLQPVKEIVKICRE------------EGVQVHVDAAQAVGKIPVDVQELNADFLSISAH 242 (428)
T ss_pred ----CCCceEEEEEecccCccccccHHHHHHHhCc------------CCcEEEeehhhhcCCccccHHHcCchheeeecc
Confidence 6899999999999999999999999999998 899999999999999999999999999999999
Q ss_pred ccccCCCcceEEEEech-hHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHH
Q 010538 275 KIFGYPTGLGALIMRND-AAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPA 353 (508)
Q Consensus 275 K~~g~P~G~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 353 (508)
|||| |+|+|+||++++ -.-.+.|.+.||++ .+.+++||.+++...++.+|+++..+. +..
T Consensus 243 K~yg-p~~iGaLYvr~~~~~~~~~p~~~GGgq-----------------~r~~rsGT~~~~~~~~~gsA~e~~~~~-~~~ 303 (428)
T KOG1549|consen 243 KIYG-PPGIGALYVRRKRPRLRVEPPLSGGGQ-----------------ERGLRSGTVATPLAVGLGSAAEFVNKE-MAY 303 (428)
T ss_pred cccC-CCcceEEEEccCCCcccccCcccCCcc-----------------ccccccCCcCchhhhhhHHHHHHHHhh-cch
Confidence 9999 888999999972 22234577788876 788999999999999999999988764 566
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCC
Q 010538 354 ICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCF 433 (508)
Q Consensus 354 i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~ 433 (508)
...++.++...+..++.... +.+.+.+++.. +..+.++|.++...+.- + .+...-+.++.|..
T Consensus 304 ~~~~~~~~~~~ll~~i~~~~-----~~~~~~G~~~~-----~~~~~~~~~~~~~~g~~-----~--~~~~~~~~l~s~~a 366 (428)
T KOG1549|consen 304 DEAIIKRLSEKLLMGIGQSL-----PEVTLNGSGKS-----RYPGLVSLSFPYVEGES-----L--LMDLKDVALSSGSA 366 (428)
T ss_pred hHHHHHHHHHHHHHHHhhhC-----chhhccCCccc-----ccccceeeecccccCcc-----h--hhhhhhhhhcccch
Confidence 66667778888888875422 35777776653 34788888887444332 2 33445688888888
Q ss_pred CCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhhcc
Q 010538 434 CNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQFLN 506 (508)
Q Consensus 434 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~~~ 506 (508)
|.... ++||.+|-+.|.. ....+..||||++.|||.+|++++++.+++.+..+..++
T Consensus 367 ~~~~~------~epsy~l~~~G~~----------~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s 423 (428)
T KOG1549|consen 367 CTSAS------LEPSYVLRAIGVD----------EDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMS 423 (428)
T ss_pred hhcCC------CCcchhhhhcCcc----------hhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccC
Confidence 87643 3688888888761 124578999999999999999999999999988766543
No 9
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=3.6e-48 Score=399.77 Aligned_cols=360 Identities=21% Similarity=0.242 Sum_probs=302.0
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHH
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVG 120 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~ 120 (508)
+|||+++++++++.+++++.+ ++...+++|++ .+..+....+.++++|+.+++++|++++ +|+||+|+|+++++++
T Consensus 1 iYld~a~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~t~~~t~a~~~~l 77 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLP-FLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK--EIIFTSGATESNNLAI 77 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHH-HHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHH
Confidence 699999999999999998765 44455678876 4444566778899999999999999988 8999999999998887
Q ss_pred hhcC---CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 121 EAFP---WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 121 ~~l~---~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
.++. .++|++|+++..+|+++...+..++..|++++.+|.++++.+ |+++++ +++
T Consensus 78 ~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~---------------d~~~l~--~~i----- 135 (364)
T PLN02651 78 KGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLV---------------DLDELA--AAI----- 135 (364)
T ss_pred HHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcC---------------CHHHHH--Hhc-----
Confidence 6641 367899999999999987666666678999999998766655 688888 555
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIF 277 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~ 277 (508)
+++|++|++++++|+||.++|+++|.++||+ +|+++++|++|++|..|+|+.++++|++++|+|||+
T Consensus 136 -~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~------------~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~ 202 (364)
T PLN02651 136 -RPDTALVSVMAVNNEIGVIQPVEEIGELCRE------------KKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIY 202 (364)
T ss_pred -CCCcEEEEEECCCCCceecccHHHHHHHHHH------------cCCEEEEEcchhhCCcccCcccCCCCEEEechhhhC
Confidence 4678999999999999999999999999998 899999999999999999999999999999999986
Q ss_pred cCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHH
Q 010538 278 GYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRH 357 (508)
Q Consensus 278 g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~ 357 (508)
| |.|+|+++++++....+.|.+.||++ ..+++.||+|+++++++.++++++.+ +.++++++
T Consensus 203 g-p~G~g~l~v~~~~~~~l~p~~~g~~~-----------------~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~ 263 (364)
T PLN02651 203 G-PKGVGALYVRRRPRVRLEPLMSGGGQ-----------------ERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKH 263 (364)
T ss_pred C-CCceEEEEEcCCCCCCCCccccCCCc-----------------cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHH
Confidence 6 99999999999988888888777643 45678999999999999999999987 46999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCch
Q 010538 358 IASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPG 437 (508)
Q Consensus 358 ~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~ 437 (508)
+.++++++++.|++.. +++++++|.... .++.++++|.+++.++ .++.+.|.+ |.++.|++|+++
T Consensus 264 ~~~l~~~l~~~l~~~~-----~~~~i~~~~~~~---~~~~~i~~~~~~~~~~-----~~~~~~L~~--i~v~~g~~c~~~ 328 (364)
T PLN02651 264 MKALRERLLNGLRAKL-----GGVRVNGPRDPE---KRYPGTLNLSFAYVEG-----ESLLMGLKE--VAVSSGSACTSA 328 (364)
T ss_pred HHHHHHHHHHHHHhhC-----CCEEEECCCCcc---cCcCCEEEEEeCCCCH-----HHHHHHhCC--EEEEchhhcCCC
Confidence 9999999999998631 479999874321 2347899999976543 458888865 999999999987
Q ss_pred HHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHH
Q 010538 438 ACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAK 489 (508)
Q Consensus 438 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~ 489 (508)
.. .+|+++++||..+ ....+.+|+|+++|||++|||
T Consensus 329 ~~------~~~~~~~~~g~~~----------~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 329 SL------EPSYVLRALGVPE----------EMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CC------CcCHHHHHcCCCh----------HHhCceEEEEcCCCCCHHHcC
Confidence 42 4789999998631 123589999999999999985
No 10
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1e-46 Score=394.04 Aligned_cols=390 Identities=22% Similarity=0.300 Sum_probs=318.1
Q ss_pred HHHHHhhccCCC-----CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCc-cchhhhhhHHHHHHHHHHHHHcCCC-
Q 010538 28 QIRATEFKRLEN-----GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQ-SDISLATCDIVRAAREQVLDYFNAS- 100 (508)
Q Consensus 28 ~~r~~~f~~~~~-----~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~~~~- 100 (508)
.+|+ +||.+++ +++|||+++++++|+.+++++.+ ++.+.+++|+.. +..+......++++|+.+++++|++
T Consensus 2 ~~~~-~f~~~~~~~~~~~~~yld~~~~~~~p~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~ 79 (403)
T TIGR01979 2 NIRA-DFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAE-YYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAAS 79 (403)
T ss_pred chhh-hCchhcCCCCCCceEEEeCccccCCCHHHHHHHHH-HHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 4788 9999832 46999999999999999888654 655666777643 3344556678899999999999998
Q ss_pred CCCceEEEcCChHHHHHHHHhhcC---CCCCCeEEEecccccchH-HHHHHHHhcCCeEEEEccCCccCccccccccccc
Q 010538 101 MKDYKCIFTSGATAALKLVGEAFP---WSHQSSYMYTMENHNSVL-GIREYALSQGAAAFAIDVEEAVDNDGLSESLVTS 176 (508)
Q Consensus 101 ~~~~~i~~t~g~t~al~~~~~~l~---~~~g~~vl~~~~~h~s~~-~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~ 176 (508)
++ +|++|+|+|+++++++.++. +++|++|+++..+|++.. .|...++..|++++.++.+.++.+
T Consensus 80 ~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~---------- 147 (403)
T TIGR01979 80 DE--EIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTL---------- 147 (403)
T ss_pred CC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCC----------
Confidence 66 89999999999999988762 577999999999999865 455566678999999998866655
Q ss_pred cccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC
Q 010538 177 TKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT 256 (508)
Q Consensus 177 ~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~ 256 (508)
++++++ +++ +++|++|++++++|+||.++|+++|.++|++ +|+++++|++|+.|.
T Consensus 148 -----~~~~l~--~~i------~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~------------~~~~~ivD~a~~~g~ 202 (403)
T TIGR01979 148 -----DLDDLE--KLL------TEKTKLVAITHVSNVLGTVNPVEEIAKLAHQ------------VGAKVLVDGAQAVPH 202 (403)
T ss_pred -----CHHHHH--HHh------ccCCeEEEEEcccccccccCCHHHHHHHHHH------------cCCEEEEEchhhcCc
Confidence 578888 554 5678999999999999999999999999998 899999999999999
Q ss_pred CCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 257 QPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 257 ~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
.++++.++++|++++|+||++| |.|+|+++++++.++.+.|...||.......... ......+.+++.||+++..+
T Consensus 203 ~~~~~~~~~~d~~~~s~~K~~g-p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~gt~~~~~~ 278 (403)
T TIGR01979 203 MPVDVQALDCDFYVFSGHKMYG-PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEE---TTYNEAPHKFEAGTPNIAGV 278 (403)
T ss_pred cccCccccCCCEEEEecccccC-CCCceEEEEchHHHhcCCCeecCCCceeecccCc---cccCCChhhcCCCCccHHHH
Confidence 9999998899999999999988 9999999999998888877766654432111100 01112356788999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHH
Q 010538 337 ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYRE 416 (508)
Q Consensus 337 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 416 (508)
+++.++++++.+.|++.+.+++.++++++++.|+++ ++++++.+... .+++++++|.+++.+ ..+
T Consensus 279 ~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~------~g~~~~~~~~~----~~~~~~v~~~~~~~~-----~~~ 343 (403)
T TIGR01979 279 IGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEI------PGLRIYGPRDA----EDRGGIISFNVEGVH-----PHD 343 (403)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------CCEEEeCCCCc----cccCceEEEEeCCcC-----HHH
Confidence 999999999988899999999999999999999987 47999876532 245789999987543 345
Q ss_pred HHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 417 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 417 l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
+.+.|+++||.++.|++|+.+.. .++|. ++++|||+++|||.+||++++++|+
T Consensus 344 ~~~~L~~~gI~v~~g~~~~~~~~------------~~~~~---------------~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 344 VGTILDEEGIAVRSGHHCAQPLM------------RRFGV---------------PATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred HHHHHhhCCEEEcchhhhhHHHH------------HHhCC---------------CCEEEEEeccCCCHHHHHHHHHHHH
Confidence 88899999999999998876431 22221 5789999999999999999999999
Q ss_pred hhhhhh
Q 010538 497 DFVNFS 502 (508)
Q Consensus 497 ~~~~~~ 502 (508)
++++++
T Consensus 397 ~~~~~~ 402 (403)
T TIGR01979 397 KVRKFF 402 (403)
T ss_pred HHHHHh
Confidence 888764
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=4.4e-47 Score=393.75 Aligned_cols=370 Identities=23% Similarity=0.272 Sum_probs=309.8
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHh
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGE 121 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~ 121 (508)
+|||+++++++++.+++++.+ ++.+.+++|+..+..+..+.+.++++|+.+++++|++++ +|+||+|+|+++++++.
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~i~~t~~~t~a~~~al~ 77 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLP-YFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD--EIIFTSGGTESDNTAIK 77 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHH-HHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCcHHHHHHHHHH
Confidence 699999999999999988766 444567888865555566778899999999999999988 89999999999999888
Q ss_pred hcC--CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCC
Q 010538 122 AFP--WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAG 199 (508)
Q Consensus 122 ~l~--~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~ 199 (508)
++. .+++++|+++..+||++......++..|++++.+|.+.++.+ |+++++ +++ +
T Consensus 78 ~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~---------------~~~~l~--~~i------~ 134 (379)
T TIGR03402 78 SALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRL---------------DLEELR--AAI------T 134 (379)
T ss_pred HHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcC---------------CHHHHH--Hhc------C
Confidence 762 356789999999999988777777778999999998766655 688888 555 4
Q ss_pred CCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccC
Q 010538 200 DAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGY 279 (508)
Q Consensus 200 ~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~ 279 (508)
++|++|++++++|+||.++|+++|.++|++ +|+++++|++|++|..|+|+.++++|++++|+||++|
T Consensus 135 ~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~------------~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~g- 201 (379)
T TIGR03402 135 DDTALVSVMWANNETGTIFPIEEIGEIAKE------------RGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHG- 201 (379)
T ss_pred CCcEEEEEEcccCCeeecccHHHHHHHHHH------------cCCEEEEECcccccccccCcccCCCCEEEEcHHHcCC-
Confidence 678999999999999999999999999998 9999999999999999999999999999999999776
Q ss_pred CCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHH
Q 010538 280 PTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIA 359 (508)
Q Consensus 280 P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 359 (508)
|.|+|+++++++. .+.|.+.|+.. ..+++.||+|+++++++.++++++.+ .++.+.+++.
T Consensus 202 p~G~g~l~v~~~~--~~~p~~~g~~~-----------------~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~ 261 (379)
T TIGR03402 202 PKGVGALYIRKGT--RFRPLLRGGHQ-----------------ERGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVR 261 (379)
T ss_pred CCceEEEEECCCC--CCCCcccCCcc-----------------CCCcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHH
Confidence 9999999999875 35666555432 34456899999999999999999876 5899999999
Q ss_pred HHHHHHHHHHhc-ccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchH
Q 010538 360 SLGMYVRKVLLS-LRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGA 438 (508)
Q Consensus 360 ~l~~~l~~~L~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~ 438 (508)
++++++++.|++ + +++++.++... +.+++++|.+++.++ .++.+.|.++||.++.|++|+.+.
T Consensus 262 ~l~~~l~~~l~~~~------~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~~l~~~gI~v~~g~~c~~~~ 325 (379)
T TIGR03402 262 ALRDRLEAGLLARI------PDARLNGDPTK-----RLPNTVNISFEYIEG-----EAILLLLDMEGICASSGSACTSGS 325 (379)
T ss_pred HHHHHHHHHHHhhC------CCEEEeCCCcc-----CCCCEEEEEecCCCH-----HHHHHhhccCCEEEEchhhcCCCC
Confidence 999999999985 6 47888876432 235688888876433 458889999999999999999875
Q ss_pred HHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 439 CAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 439 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
. .+|+++.+||..+ ....+.||+|+|+|||.+||+++++.|+++++.+
T Consensus 326 ~------~~~~~~~~lg~~~----------~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 326 L------EPSHVLRAMGVPH----------TAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred C------CcCHHHHHcCCCh----------hhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3 5678888888631 1235789999999999999999999999987654
No 12
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=5.6e-47 Score=391.87 Aligned_cols=366 Identities=27% Similarity=0.353 Sum_probs=299.9
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCC-CCceEEEcCChHHHHHHH
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASM-KDYKCIFTSGATAALKLV 119 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~~i~~t~g~t~al~~~ 119 (508)
||||+++++++|+.+++++.+ ++.+.+.||++ .+..+....+.++++|+.+++++|+++ + +|+|++|+|.+++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~--~v~~~~~~t~a~~~~ 77 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISD-YLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE--EVVFTSNGTEALNAV 77 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHH-HHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE--EEEEESSHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHH-HHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc--ccccccccchhhhhh
Confidence 799999999999999999865 54566778854 344566678899999999999999998 5 899999999999999
Q ss_pred Hhhc--CCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCC
Q 010538 120 GEAF--PWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERD 196 (508)
Q Consensus 120 ~~~l--~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~ 196 (508)
+.++ .+++|++|+++..+|++.... ....++.|++++.++.+.++.+ |+++++ ++|
T Consensus 78 ~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~---------------~~~~~~--~~l---- 136 (371)
T PF00266_consen 78 ASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSL---------------DLEDLE--EAL---- 136 (371)
T ss_dssp HHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSC---------------SHHHHH--HHH----
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccchh---------------hhhhhh--hhh----
Confidence 9998 468899999999999998754 4455688999999998776666 578887 444
Q ss_pred CCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccc
Q 010538 197 PAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKI 276 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~ 276 (508)
+++|++|++++++|.||.++|+++|.++||+ +|+++++|++|++|..++|+.++++||+++|+||
T Consensus 137 --~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~------------~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K- 201 (371)
T PF00266_consen 137 --NPDTRLVSISHVENSTGVRNPIEEIAKLAHE------------YGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK- 201 (371)
T ss_dssp --HTTESEEEEESBETTTTBBSSHHHHHHHHHH------------TTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-
T ss_pred --ccccceEEeecccccccEEeeeceehhhhhc------------cCCceeEechhccccccccccccccceeeecccc-
Confidence 5899999999999999999999999999998 8999999999999999999999999999999999
Q ss_pred ccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHH
Q 010538 277 FGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICR 356 (508)
Q Consensus 277 ~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~ 356 (508)
+++|.|+|+++++++.+++++|...+|........ ..+ .......+++.||+++..++++..+++++.+.|++++.+
T Consensus 202 l~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~-~~~--~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 278 (371)
T PF00266_consen 202 LGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSL-QEY--GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRE 278 (371)
T ss_dssp TTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHH-HHH--CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCchhhheehhhhhhccccccccccccccccc-hhc--ccccccccccccceeeehhhhHHHHHhhhhccccccchh
Confidence 55599999999999999999888877753211100 001 122456788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCc
Q 010538 357 HIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNP 436 (508)
Q Consensus 357 ~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~ 436 (508)
|..++++++++.|.++ ++++++++... .+++++++|.+++. +..++.+.|.++||.++.|+.|+.
T Consensus 279 ~~~~l~~~~~~~l~~~------~~~~~~~~~~~----~~~~~i~~~~~~~~-----~~~~~~~~L~~~~I~~~~G~~~~~ 343 (371)
T PF00266_consen 279 RIRELAEYLREALEEL------PGIEVLGPDDE----PRRPSIVSFNLPGS-----DADDVVKYLEERGIAVSTGSACAG 343 (371)
T ss_dssp HHHHHHHHHHHHHHHT------TTEEESSSSCG----GBGTTEEEEEETTS-----SHHHHHHHHHHHTEEEEESTTTCH
T ss_pred hhhhHHHHHHhhhhcC------CceeEeeeccc----ccccceEEEeecCC-----CHHHHHHHHhhcCEEEeccCcccH
Confidence 9999999999999998 47899885433 46799999999764 345699999999999999999984
Q ss_pred hHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHH
Q 010538 437 GACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVN 491 (508)
Q Consensus 437 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l 491 (508)
+.. ..++ ..+.||+|+|+|||.+|||+|
T Consensus 344 ~~~------------~~~~---------------~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 344 PSL------------DILG---------------MGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHH------------HHHH---------------TTTEEEEE-GTTSSHHHHHHH
T ss_pred HHH------------HHhC---------------CCCEEEEeccCCCCHHHHhhC
Confidence 431 1111 158999999999999999986
No 13
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=5.6e-46 Score=385.88 Aligned_cols=372 Identities=22% Similarity=0.246 Sum_probs=308.3
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC-CCCCceEEEcCChHHHHHHHH
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA-SMKDYKCIFTSGATAALKLVG 120 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~~~~~~i~~t~g~t~al~~~~ 120 (508)
+||||++++++++.+++++.+ ++.+.+.||++.+..+......++++++.+++.+++ +++ +|++|+|+|+++++++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~-~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~--~i~~t~g~teal~~~~ 77 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDP-FFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLD--DIIITSCATESNNWVL 77 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHH-HHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHH
Confidence 699999999999999888754 555677899876555556677788888999999998 577 8999999999999999
Q ss_pred hhcCC----CC-CCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 121 EAFPW----SH-QSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 121 ~~l~~----~~-g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
.++.+ ++ +++|+++..+||++......++..|++++.+|.+.++.+ |+++++ +++
T Consensus 78 ~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~---------------d~~~l~--~~i--- 137 (382)
T TIGR03403 78 KGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTI---------------TAEQVR--EAI--- 137 (382)
T ss_pred HHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCC---------------CHHHHH--Hhc---
Confidence 88632 34 578999999999998887777788999999998866655 578888 554
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYK 275 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K 275 (508)
+++|++|++++++|+||.++|+++|.++|++ +|+++++|++|+.|..++++.++++|++++|+||
T Consensus 138 ---~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~------------~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K 202 (382)
T TIGR03403 138 ---TEKTALVSVMWANNETGMIFPIKEIGEICKE------------RGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHK 202 (382)
T ss_pred ---ccCCeEEEEEcccCCCccccCHHHHHHHHHH------------cCCEEEEechhhcCCCccCccccCCCEEEEcchh
Confidence 4578999999999999999999999999998 8999999999999999999999999999999999
Q ss_pred cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHH
Q 010538 276 IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAIC 355 (508)
Q Consensus 276 ~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~ 355 (508)
|+| |.|+|+++++++. .+.|.+.|+.+ ...++.||+|+++++++..+++++.+ +++.+.
T Consensus 203 ~~g-p~G~g~l~vr~~~--~~~p~~~g~~~-----------------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~ 261 (382)
T TIGR03403 203 FHG-PKGVGGLYIRKGV--ELTPLFHGGEH-----------------MGGRRSGTLNVPYIVAMGEAMRLANE-YLDFEK 261 (382)
T ss_pred hCC-CCceEEEEECCCC--CCCCcccCCCC-----------------CCCcccCCcChHHHHHHHHHHHHHHH-hHHHHH
Confidence 988 9999999999875 35665444432 23456799999999999999998766 488999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCC
Q 010538 356 RHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCN 435 (508)
Q Consensus 356 ~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~ 435 (508)
++++.+++++.+.|+++ ++++++++... +.+++++|.+++.++ ..+.+.|.++||.++.|+.|+
T Consensus 262 ~~~~~l~~~l~~~L~~~------~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~~L~~~gI~v~~g~~c~ 325 (382)
T TIGR03403 262 SHVRRLRDRLEDALLEL------PDVFVVGDREH-----RVPNTILISIKGVEG-----EAMLWDLNKAGIAASTGSACA 325 (382)
T ss_pred HHHHHHHHHHHHHHhcC------CCEEEECCCCC-----CcCCEEEEEeCCCCH-----HHHHHhhccCCEEEEchhccC
Confidence 99999999999999987 47999887542 336788999876433 347778999999999999998
Q ss_pred chHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 436 PGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 436 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
... .++++++.+||... ....+.||+|+++|||.+|||+++++|+++++.++.
T Consensus 326 ~~~------~~~~~v~~~~g~~~----------~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 326 SED------LEANPVMVAIGADK----------ELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred CCC------CCcCHHHHHcCCCh----------HHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 753 36688888887521 113578999999999999999999999998876543
No 14
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=7.2e-45 Score=379.99 Aligned_cols=374 Identities=20% Similarity=0.254 Sum_probs=304.7
Q ss_pred CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 40 GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 40 ~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
..+|||+++++++++.+++++.+ ++...+++|++ .+..++...+.++++|+.+++++|++++ +|+||+|+|+++++
T Consensus 3 ~~~yld~aa~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~~~g~t~a~~~ 79 (402)
T TIGR02006 3 LPIYLDYAATTPVDPRVAEKMMP-YLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR--EIVFTSGATESNNL 79 (402)
T ss_pred ccEEeeCCcCCCCCHHHHHHHHH-HHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHH
Confidence 46999999999999999988755 44445677774 3334445567889999999999999988 89999999999999
Q ss_pred HHhhcC---CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 119 VGEAFP---WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 119 ~~~~l~---~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
++.++. .++|++|+++..+|+++......++..|++++.+|.+.++.+ |+++++ +++
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~---------------d~~~l~--~~l--- 139 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLI---------------DLEELK--AAI--- 139 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcC---------------CHHHHH--Hhc---
Confidence 887763 367899999999999988776666778999999998766655 688888 555
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYK 275 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K 275 (508)
.+++++|++++++|+||.+.|+++|.++|++ +|+++++|++|++|..|+++.++++|++++|+||
T Consensus 140 ---~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~------------~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K 204 (402)
T TIGR02006 140 ---RDDTILVSIMHVNNEIGVIQDIAAIGEICRE------------RKVFFHVDAAQSVGKIPINVNELKVDLMSISGHK 204 (402)
T ss_pred ---CCCCEEEEEECCCcCceecccHHHHHHHHHH------------cCCEEEEEcchhcCCcccCccccCCCEEEEehhh
Confidence 4568999999999999999999999999998 8999999999999999999999999999999999
Q ss_pred cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHH
Q 010538 276 IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAIC 355 (508)
Q Consensus 276 ~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~ 355 (508)
++| |.|+|+++++++....+.|...++++ .++++.||+++..++++..+++++.+ +++.+.
T Consensus 205 ~~g-p~G~G~l~~~~~~~~~~~~~~~g~~~-----------------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~ 265 (402)
T TIGR02006 205 IYG-PKGIGALYVRRKPRVRLEALIHGGGH-----------------ERGMRSGTLPTHQIVGMGEAFRIAKE-EMAQDT 265 (402)
T ss_pred hcC-CCceEEEEEccCCCCCCCceecCCCc-----------------cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHH
Confidence 888 99999999998876666776555432 45678899999999999999999875 689999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCC
Q 010538 356 RHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCN 435 (508)
Q Consensus 356 ~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~ 435 (508)
+++.++++++++.|+++ ++++++++... +.++++.+.+...++ ..+...| ++|.++.|++|+
T Consensus 266 ~~~~~l~~~l~~~l~~~------~~v~~~~~~~~-----~~p~~~~v~f~~~~~-----~~~~~~l--~~i~v~~G~~c~ 327 (402)
T TIGR02006 266 AHVLALRDRLLNGIKSI------EEVYLNGDLEH-----RVPGNLNVSFNYVEG-----ESLIMAL--KDLAVSSGSACT 327 (402)
T ss_pred HHHHHHHHHHHHHHhcC------CCEEEeCCccc-----cCCCeEEEEEeCcCH-----HHHHHhc--CCEEEechhhcC
Confidence 99999999999999987 37888875432 224444455544322 2354444 699999999998
Q ss_pred chHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 436 PGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 436 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
+... .+++++.++|.. .....++||+|+++|||.+|||+++++|+++++.++.
T Consensus 328 ~~~~------~~~~~l~~lg~~----------~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 328 SASL------EPSYVLRALGIN----------DELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred CCCC------CccHHHHHcCCC----------hhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7542 467778888752 1123589999999999999999999999998876644
No 15
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=5.9e-44 Score=370.57 Aligned_cols=371 Identities=19% Similarity=0.193 Sum_probs=302.7
Q ss_pred CeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHH
Q 010538 41 TVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVG 120 (508)
Q Consensus 41 ~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~ 120 (508)
++|||+++++++++.+++++.+ ++...++||.+.+..+....+..+++|+.+|+++|++++ +|++|+|+|+++++++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~i~~~~g~t~a~~~~~ 77 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQK-AASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ--GIYFTSGGTESNYLAI 77 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHH-HHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCcHHHHHHHHH
Confidence 4899999999999999998865 555667788776666677778899999999999999988 8999999999999888
Q ss_pred hhcC---CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 121 EAFP---WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 121 ~~l~---~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
.++. .++|++|+++..+||++....+.++..|++++.+|.+.++.+ |+++++ +++
T Consensus 78 ~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~---------------d~~~l~--~~l----- 135 (381)
T PRK02948 78 QSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLI---------------RLVDLE--RAI----- 135 (381)
T ss_pred HHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCC---------------CHHHHH--Hhc-----
Confidence 7763 256899999999999998888888888999999998766555 688888 555
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIF 277 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~ 277 (508)
.+++++|++++++|+||.++|+++|.++|++ +|+++++|++|++|..++++.++++|++++|+||++
T Consensus 136 -~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~------------~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~ 202 (381)
T PRK02948 136 -TPDTVLASIQHANSEIGTIQPIAEIGALLKK------------YNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY 202 (381)
T ss_pred -CCCCEEEEEECCcCCcEeehhHHHHHHHHHH------------cCCEEEEEChhhccccccCcccCCCCEEEecHHhcC
Confidence 4568999999999999999999999999998 899999999999999999999999999999999999
Q ss_pred cCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHH
Q 010538 278 GYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRH 357 (508)
Q Consensus 278 g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~ 357 (508)
| |.|+|+++++++.. +.+...++. ...+++.||+|+++++++.++++.+.+ .+++++++
T Consensus 203 g-p~G~G~l~~~~~~~--~~~~~~~~~-----------------~~~~~~~~t~~~~~~~a~~~al~~~~~-~~~~~~~~ 261 (381)
T PRK02948 203 G-PKGVGAVYINPQVR--WKPVFPGTT-----------------HEKGFRPGTVNVPGIAAFLTAAENILK-NMQEESLR 261 (381)
T ss_pred C-CCcEEEEEEcCCCC--CCCcccCCC-----------------CCCCcCCCCccHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 8 99999999988751 233322221 145678899999999999999998755 48899999
Q ss_pred HHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCch
Q 010538 358 IASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPG 437 (508)
Q Consensus 358 ~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~ 437 (508)
+.++++++++.|+++ ++++....... ...+.++.|.+++.++ .++...|.++||.++.|.+|+.+
T Consensus 262 ~~~~~~~l~~~L~~~-------~~~v~~~~~~~---~~~~~i~~~~~~~~~~-----~~~~~~l~~~gI~v~~g~~c~~~ 326 (381)
T PRK02948 262 FKELRSYFLEQIQTL-------PLPIEVEGHST---SCLPHIIGVTIKGIEG-----QYTMLECNRRGIAISTGSACQVG 326 (381)
T ss_pred HHHHHHHHHHHHhcC-------CCCEEEeCCCc---cCcCCEEEEEeCCCCH-----HHHHHhcccCCEEEEchHhcCCC
Confidence 999999999999987 33333221110 1235688888765432 34677888899999999999875
Q ss_pred HHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 438 ACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 438 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.. .+|+++.+||... ....+++|||+++|||.+|+++++++|+++++.
T Consensus 327 ~~------~p~~~~~~~~~~~----------~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 327 KQ------EPSKTMLAIGKTY----------EEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred CC------CCCHHHHHcCCCh----------HHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 42 5788888887410 012578999999999999999999999987653
No 16
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=3.1e-43 Score=367.03 Aligned_cols=377 Identities=23% Similarity=0.268 Sum_probs=302.2
Q ss_pred chHHHHHHhhccCCCC-CeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC
Q 010538 25 SIDQIRATEFKRLENG-TVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD 103 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~-~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~ 103 (508)
.+..+|. +||.++++ .+|||+++++++|+.+++++.+.+ .....++...+..........+++++.+++++|++++
T Consensus 2 ~~~~~r~-~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~- 78 (397)
T TIGR01976 2 DVEAVRG-QFPALADGDRVFFDNPAGTQIPQSVADAVSAAL-TRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP- 78 (397)
T ss_pred ChhHHHh-hCCcCCCCCeEEecCCccCCCCHHHHHHHHHHH-HhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-
Confidence 3567898 99998433 799999999999999998876644 3333445444443334567789999999999999887
Q ss_pred ceEEEcCChHHHHHHHHhhc--CCCCCCeEEEecccccchHH-HHHHHHhcCCeEEEEccCC-ccCcccccccccccccc
Q 010538 104 YKCIFTSGATAALKLVGEAF--PWSHQSSYMYTMENHNSVLG-IREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKI 179 (508)
Q Consensus 104 ~~i~~t~g~t~al~~~~~~l--~~~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~ 179 (508)
+|++++|+|++++++..++ .+++|++|+++..+|++... |...++..|++++.++.+. ++.+
T Consensus 79 -~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------- 144 (397)
T TIGR01976 79 -EVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGEL------------- 144 (397)
T ss_pred -eEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCc-------------
Confidence 7999999999999888776 36789999999999988754 4466677899999999875 4444
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP 259 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~ 259 (508)
++++++ +++ +++|++|++++++|+||.+.|+++|.++|++ +|+++++|++|+.|..++
T Consensus 145 --~~~~l~--~~i------~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~------------~~~~~ivD~a~~~~~~~~ 202 (397)
T TIGR01976 145 --HPDDLA--SLL------SPRTRLVAVTAASNTLGSIVDLAAITELVHA------------AGALVVVDAVHYAPHGLI 202 (397)
T ss_pred --CHHHHH--Hhc------CCCceEEEEeCCCCCCCccCCHHHHHHHHHH------------cCCEEEEehhhhccccCC
Confidence 678888 555 4678999999999999999999999999998 899999999999999999
Q ss_pred CCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHH
Q 010538 260 DLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASI 339 (508)
Q Consensus 260 d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 339 (508)
++.++++|++++|+|||+| |. +|+++++++.++.+.+....+.. .....+++.||+++..++++
T Consensus 203 ~~~~~~~d~~~~s~~K~~g-~~-~G~l~~~~~~~~~l~~~~~~~~~--------------~~~~~~~~~gt~~~~~~~~l 266 (397)
T TIGR01976 203 DVQATGADFLTCSAYKFFG-PH-MGILWGRPELLMNLPPYKLTFSY--------------DTGPERFELGTPQYELLAGV 266 (397)
T ss_pred CHHHcCCCEEEEechhhcC-Cc-eEEEEEcHHHHhhCCCccccCcc--------------CCCcchhcCCCCCHHHHHHH
Confidence 9999999999999999998 85 89999999998877765432210 12356789999999999999
Q ss_pred HHHHHHHHhcC--------------hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEee
Q 010538 340 RHGFNLINSLT--------------VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLK 405 (508)
Q Consensus 340 ~~al~~~~~~g--------------~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 405 (508)
.+|++++.+.| ++.+.+++.++++++++.|+++ ++++++.+... ..++++++|.++
T Consensus 267 ~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~------~~~~~~~~~~~----~~~~~~~~~~~~ 336 (397)
T TIGR01976 267 VAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDL------PGVTLYGVARL----AARVPTVSFTVH 336 (397)
T ss_pred HHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEeCCCCc----cCCCceEEEEeC
Confidence 99999988776 6788999999999999999987 36888876321 124789998886
Q ss_pred CCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 406 RPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 406 ~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
+. +..++.+.|.++||.++.|+.|.++. .+++|++ ...+++|||+|+|||+
T Consensus 337 ~~-----~~~~l~~~L~~~gI~v~~~~~~~~~~-~~~~~~~-----------------------~~~~~iRis~~~~~t~ 387 (397)
T TIGR01976 337 GL-----PPQRVVRRLADQGIDAWAGHFYAVRL-LRRLGLN-----------------------DEGGVVRVGLAHYNTA 387 (397)
T ss_pred Cc-----CHHHHHHHHHHCCeEEEeCccchHHH-HHHhCCC-----------------------CCCCeEEEEeeccCCH
Confidence 53 23458899999999999998886543 1222211 1257899999999999
Q ss_pred HHHHHHHHhh
Q 010538 486 EDAKVNRCSS 495 (508)
Q Consensus 486 eev~~l~~~~ 495 (508)
+|+++++++|
T Consensus 388 ~di~~l~~~l 397 (397)
T TIGR01976 388 EEVDRLLEAL 397 (397)
T ss_pred HHHHHHHHhC
Confidence 9999998864
No 17
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=4.2e-43 Score=367.17 Aligned_cols=383 Identities=16% Similarity=0.153 Sum_probs=284.0
Q ss_pred chHHHHHHhhccCC----CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchh-hhhhHHHHHHHHHHHHHcCC
Q 010538 25 SIDQIRATEFKRLE----NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDIS-LATCDIVRAAREQVLDYFNA 99 (508)
Q Consensus 25 ~~~~~r~~~f~~~~----~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~la~~~~~ 99 (508)
.++.+|+ +||.+. ++++|||+++.+++|+.+.+++. .++..+..++...+..+ ..+....++.++ + +++|+
T Consensus 9 ~~~~~r~-~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~ 84 (406)
T TIGR01814 9 PLRALRD-EFHLPKIGDENAVIYLDGNSLGLMPKAARNALK-EELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGA 84 (406)
T ss_pred hHHHHHH-hcCCCcccCCCCcEEecCCCcCcCcHHHHHHHH-HHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCC
Confidence 7888998 999762 46899999999988777776654 45443222222222111 112233333434 5 89999
Q ss_pred CCCCceEEEcCChHHHHHHHHhhcCCCC---CCeEEEecccccchHHH-HHHHHhcCCeE----EEEccCCccCcccccc
Q 010538 100 SMKDYKCIFTSGATAALKLVGEAFPWSH---QSSYMYTMENHNSVLGI-REYALSQGAAA----FAIDVEEAVDNDGLSE 171 (508)
Q Consensus 100 ~~~~~~i~~t~g~t~al~~~~~~l~~~~---g~~vl~~~~~h~s~~~~-~~~~~~~G~~v----~~v~~~~~~~~~~l~~ 171 (508)
+++ +|+||+|+|+++++++.++ +++ +++|+++..+||+.... ...+++.|+++ +.++.+.++.+
T Consensus 85 ~~~--~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~----- 156 (406)
T TIGR01814 85 KED--EVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETL----- 156 (406)
T ss_pred CCC--cEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCcc-----
Confidence 988 8999999999999999997 443 34788888999987664 44566778887 46666544444
Q ss_pred ccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 172 SLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
++++++ +.++ ..+++|++|++++++|.||.+.|+++|.++||+ +|+++++|++
T Consensus 157 ----------~~~~l~--~~~~---~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~------------~g~~~~vD~a 209 (406)
T TIGR01814 157 ----------RLEDIL--DTIE---KNGDDIAVILLSGVQYYTGQLFDMAAITRAAHA------------KGALVGFDLA 209 (406)
T ss_pred ----------CHHHHH--HHHH---hcCCCeEEEEEeccccccceecCHHHHHHHHHH------------cCCEEEEEcc
Confidence 456665 4442 125789999999999999999999999999998 8999999999
Q ss_pred ccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 252 KGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 252 ~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
|++|..|+|+.++++||+++|+|||+++|+| |+++++++....+.|...||........ ..........+.+++.||+
T Consensus 210 q~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~GT~ 287 (406)
T TIGR01814 210 HAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTR-FKMDNTLGLIPCGFRISNP 287 (406)
T ss_pred cccCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccc-cccccccCCCccceeeCCc
Confidence 9999999999999999999999998765668 8788877766567777666532111000 0000001122467889999
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW 411 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 411 (508)
|+++++++.++++++.+.|++.+++++..+++++++.|+++.+ +.++++++++... ..++++++|.++ .++
T Consensus 288 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~--~~~~~~i~~~~~~----~~r~~~v~~~~~-~~~-- 358 (406)
T TIGR01814 288 PILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCG--GPPVLTIITPRDH----AQRGCQLSLTHP-VPG-- 358 (406)
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcC--CCCceEEeCCCCh----hhcCCeEEEEec-CCH--
Confidence 9999999999999999999999999999999999999987520 1135888886532 234789999987 322
Q ss_pred cCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec-CCCCCHHHHHH
Q 010538 412 FGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF-GYMSTFEDAKV 490 (508)
Q Consensus 412 ~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~-~~~~t~eev~~ 490 (508)
.++.+.|.++||.+... ..+.||+|+ |+|||.+||++
T Consensus 359 ---~~~~~~L~~~gi~v~~~---------------------------------------~~~~iRiS~~~~~nt~~did~ 396 (406)
T TIGR01814 359 ---KAVFQALIKRGVIGDKR---------------------------------------EPSVIRVAPVPLYNTFVDVYD 396 (406)
T ss_pred ---HHHHHHHHHCCEEEecc---------------------------------------CCCeEEEechhccCCHHHHHH
Confidence 35888898999986421 146899999 79999999999
Q ss_pred HHHhhhhhh
Q 010538 491 NRCSSFDFV 499 (508)
Q Consensus 491 l~~~~~~~~ 499 (508)
++++|++++
T Consensus 397 l~~~l~~~~ 405 (406)
T TIGR01814 397 AVNVLEEIL 405 (406)
T ss_pred HHHHHHHHh
Confidence 999998764
No 18
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=9.6e-41 Score=345.37 Aligned_cols=368 Identities=23% Similarity=0.309 Sum_probs=298.9
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCChHHHHHHH
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g~t~al~~~ 119 (508)
+|||+++++++|+.+++++.+ ++...+.+|++ .+..+....+...++++.+++++|++ ++ ++++|+|+|++++++
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--~v~~~~g~t~a~~~~ 77 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVD-YYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPD--EIIFTRNTTEAINLV 77 (373)
T ss_pred CcccCccccCCCHHHHHHHHH-HHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC--eEEEeCCHHHHHHHH
Confidence 599999999999999998876 44566777765 34555667788899999999999998 66 899999999999999
Q ss_pred HhhcCCC--CCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCC
Q 010538 120 GEAFPWS--HQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERD 196 (508)
Q Consensus 120 ~~~l~~~--~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~ 196 (508)
+.++... +|++|+++..+|++.... ...++..|++++.|+.+.++.+ |+++++ +.+
T Consensus 78 ~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~l---- 136 (373)
T cd06453 78 AYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQL---------------DLEALE--KLL---- 136 (373)
T ss_pred HHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCc---------------CHHHHH--HHh----
Confidence 9998543 789999999999986544 4445578999999998765555 688888 555
Q ss_pred CCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccc
Q 010538 197 PAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKI 276 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~ 276 (508)
.+++++|++++++|+||.+.|+++|.++|++ +|+++++|++++.|..++++.+.++|++++|+||+
T Consensus 137 --~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~------------~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 202 (373)
T cd06453 137 --TERTKLVAVTHVSNVLGTINPVKEIGEIAHE------------AGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKM 202 (373)
T ss_pred --cCCceEEEEeCcccccCCcCCHHHHHHHHHH------------cCCEEEEEhhhhcCceeeeccccCCCEEEeccccc
Confidence 4578999999999999999999999999998 89999999999999999999888999999999999
Q ss_pred ccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHH
Q 010538 277 FGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICR 356 (508)
Q Consensus 277 ~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~ 356 (508)
++ +.|+|+++++++.++.+.+...++....... .... .......+++.||+++..++++.++++++.+.|++.+.+
T Consensus 203 ~~-~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~-~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~ 278 (373)
T cd06453 203 LG-PTGIGVLYGKEELLEEMPPYGGGGEMIEEVS--FEET-TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAA 278 (373)
T ss_pred cC-CCCcEEEEEchHHhhcCCCeecCCCcccccc--cccc-ccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99 5789999999999888887665543322110 0000 111235667889999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCc
Q 010538 357 HIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNP 436 (508)
Q Consensus 357 ~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~ 436 (508)
++.++++++.+.|+++ ++++++.+.. .+.++++|.+++. +..++.+.|.++||.++.|..|..
T Consensus 279 ~~~~~~~~l~~~l~~~------~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~i~~~l~~~gi~i~~g~~~~~ 341 (373)
T cd06453 279 HEHELTAYALERLSEI------PGVRVYGDAE------DRAGVVSFNLEGI-----HPHDVATILDQYGIAVRAGHHCAQ 341 (373)
T ss_pred HHHHHHHHHHHHHhcC------CCeEEeCCcc------ccCCeEEEEECCc-----CHHHHHHHHHHCCEEeccCccchh
Confidence 9999999999999987 4688875432 2378899988653 334588899999999999988876
Q ss_pred hHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 437 GACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 437 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
+.. .++|. .++||+|+++++|.+|+|++++.|
T Consensus 342 ~~~------------~~~~~---------------~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 342 PLM------------RRLGV---------------PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHH------------HHhCC---------------CCeEEEEecCCCCHHHHHHHHhhC
Confidence 532 12221 578999999999999999998864
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.2e-40 Score=344.95 Aligned_cols=371 Identities=23% Similarity=0.309 Sum_probs=291.5
Q ss_pred eeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 42 VYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 42 iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
+|||+++++ ++|+.+.+++.+ +......+++. .+..........+++++.+++++|++..+ +|++|+|+|++++++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~v~~~~g~t~al~~~ 78 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMAD-FYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSA-HVVFTNNATTALNIA 78 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHH-HHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCC-eEEEeCCHHHHHHHH
Confidence 699999877 566777777655 44443334443 23333344577889999999999996432 799999999999999
Q ss_pred HhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 120 GEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 120 ~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
+.++ +++|++|+++..+|+++... ...++..|.+++.++.+.++.+ |+++++ +++
T Consensus 79 ~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~~------ 134 (376)
T TIGR01977 79 LKGL-LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLI---------------SPERIK--RAI------ 134 (376)
T ss_pred HHhc-cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCc---------------CHHHHH--Hhc------
Confidence 9997 78899999999999987654 3455667999999998765555 688888 555
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccccc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFG 278 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g 278 (508)
++++++|++++++|+||.++|+++|.++|++ +|+++++|++|++|..++++..+++|++++|+|||++
T Consensus 135 ~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~------------~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 135 KTNTKLIVVSHASNVTGTILPIEEIGELAQE------------NGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CCCCeEEEEECCCCCccccCCHHHHHHHHHH------------cCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 4578999999999999999999999999998 8999999999999999999999999999999999988
Q ss_pred CCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHH
Q 010538 279 YPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHI 358 (508)
Q Consensus 279 ~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~ 358 (508)
+|.|+|+++++++. .+++...++... .. ..+. .......+++.||++++.++++.++++++.+.|++.+.+|+
T Consensus 203 ~p~g~g~l~~~~~~--~~~~~~~~~~~~-~~---~~~~-~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~ 275 (376)
T TIGR01977 203 GPQGTGGLYIREGI--KLKPLKSGGTGS-HS---ALID-QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKE 275 (376)
T ss_pred CCCCceEEEEcCCc--CcCceecCCCcc-cc---cccc-ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 79999999999876 255554443211 00 0111 11123467889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhC-CCeeccCCCCCch
Q 010538 359 ASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLS-GIQLRTGCFCNPG 437 (508)
Q Consensus 359 ~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~g~~~~~~ 437 (508)
+.+++++++.|.+. ++++++.+..+ ..+.++++|.+++.+ ..++.+.|.++ ||.++.|.+|+..
T Consensus 276 ~~l~~~~~~~l~~~------~~~~~~~~~~~----~~~~~~v~~~~~~~~-----~~~~~~~L~~~~gi~v~~g~~~~~~ 340 (376)
T TIGR01977 276 CMLTEKLLNGLREI------NKVKIYGPADP----ANRVGVVSFTVEGID-----SEEVADILDEKFDIATRTGLHCAPL 340 (376)
T ss_pred HHHHHHHHHHHhcC------CCeEEeCCCCc----cccCCeEEEEECCCC-----HHHHHHHHhccCCEEEEcccccchH
Confidence 99999999999987 37888876432 234789999987543 34588888877 9999999988764
Q ss_pred HHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 438 ACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 438 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.. + ++| ....+.+|+|++.+||.+||++++++|++
T Consensus 341 ~~-~-----------~~g-------------~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 341 AH-K-----------TIG-------------TFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HH-H-----------HhC-------------CCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 31 1 121 12367999999999999999999999875
No 20
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=3.1e-41 Score=346.69 Aligned_cols=346 Identities=23% Similarity=0.271 Sum_probs=283.9
Q ss_pred eeeCCCCCCCCHHHHHHHHHHhhccccCCCCCc-cchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHh
Q 010538 43 YLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQ-SDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGE 121 (508)
Q Consensus 43 yld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~ 121 (508)
|||+++++++++.+++++.+ ++...+++|+.. +..+....+.++++|+.+++++|++++ +|+||+|+|+++++++.
T Consensus 1 yld~a~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLP-WLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE--EVIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHH-HHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHH
Confidence 89999999999999988765 444446777753 333445667889999999999999988 89999999999999888
Q ss_pred hcCC---CCC-CeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 122 AFPW---SHQ-SSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 122 ~l~~---~~g-~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
++.. .+| ++|+++..+||++......++..|++++.+|.+.++.+ |+++++ +++
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~---------------d~~~l~--~~l----- 135 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRI---------------DVDELA--DAI----- 135 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcC---------------CHHHHH--HhC-----
Confidence 8732 344 78999999999988777777778999999998766655 688888 555
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIF 277 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~ 277 (508)
++++++|++++++|+||.++|+++|.++|++ +|+++++|++|++|..++|+.++++|++++|+|||+
T Consensus 136 -~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~------------~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 202 (353)
T TIGR03235 136 -RPDTLLVSIMHVNNETGSIQPIREIAEVLEA------------HEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIY 202 (353)
T ss_pred -CCCCEEEEEEcccCCceeccCHHHHHHHHHH------------cCCEEEEEchhhcCCccccccccCCCEEEeehhhcC
Confidence 4578999999999999999999999999998 899999999999999999999999999999999998
Q ss_pred cCCCcceEEEEechhHhh--hccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHH
Q 010538 278 GYPTGLGALIMRNDAAKL--LKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAIC 355 (508)
Q Consensus 278 g~P~G~G~l~~~~~~~~~--l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~ 355 (508)
| |.|+|+++++++.... +.|.+++++. .++++.||++++.++++.++++++. .+++.+.
T Consensus 203 g-p~g~g~l~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~ 263 (353)
T TIGR03235 203 G-PKGIGALVIRKRGKPKAPLKPIMFGGGQ-----------------ERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWE 263 (353)
T ss_pred C-CCceEEEEEccCcccccccCceeeCCCC-----------------cCccccCCCChHHHHHHHHHHHHHH-hhHHHHH
Confidence 7 9999999999886432 4555554432 4678899999999999999999876 4789999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCC
Q 010538 356 RHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCN 435 (508)
Q Consensus 356 ~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~ 435 (508)
+++.++++++++.|++. |++++.++.. +..++++|.+++.+ ..++.+.|++ ||.+++|..|+
T Consensus 264 ~~~~~l~~~l~~~l~~~-------g~~~~~~~~~-----~~~~i~~~~~~~~~-----~~~v~~~L~~-~i~v~~g~~~~ 325 (353)
T TIGR03235 264 VKLRAMRNQLRDALQTL-------GVKLNGDPAE-----TIPHILNFSIDGVN-----SEALIVNLRA-DAAVSTGSACS 325 (353)
T ss_pred HHHHHHHHHHHHHhccC-------CeEEeCCccc-----ccCCEEEEEeCCcC-----HHHHHHHHhC-CeEEEchhhcC
Confidence 99999999999999874 7998876542 34678999887543 3458888865 99999999998
Q ss_pred chHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 436 PGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 436 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
.+.. .+++++.+||.. .....+.+|+|+
T Consensus 326 ~~~~------~~~~~l~~~g~~----------~~~~~~~~r~s~ 353 (353)
T TIGR03235 326 SSKY------EPSHVLQAMGLD----------TDRARGAIRFSW 353 (353)
T ss_pred CCCC------CCCHHHHHcCCC----------HHHhCccEEEeC
Confidence 7642 467899999863 112358899986
No 21
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.2e-40 Score=348.43 Aligned_cols=372 Identities=21% Similarity=0.250 Sum_probs=294.1
Q ss_pred CCeeeeCCCCCCCCHHHHHHHHHHhhc--cccCCCCCc-cchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHH
Q 010538 40 GTVYLDHAGATLYSELQMEAIFRDFTT--NVYGNPHSQ-SDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAAL 116 (508)
Q Consensus 40 ~~iyld~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al 116 (508)
..||||+++++++++.+++++.+ ++. ..++++++. +..++.....++++|+.+++++|++++ +|++++|+|+|+
T Consensus 3 ~~iyld~a~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~--~v~~~~g~t~al 79 (404)
T PRK14012 3 LPIYLDYSATTPVDPRVAEKMMP-YLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR--EIVFTSGATESD 79 (404)
T ss_pred ceEEecCcCCCCCCHHHHHHHHH-HHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC--eEEEeCCHHHHH
Confidence 36999999999999999888755 443 446677652 223444457788999999999999988 899999999999
Q ss_pred HHHHhhcC---CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCC
Q 010538 117 KLVGEAFP---WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFP 193 (508)
Q Consensus 117 ~~~~~~l~---~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~ 193 (508)
++++.++. .++|++|+++..+|+++......++..|++++.++.+.++.+ |+++++ +++
T Consensus 80 ~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~---------------d~~~l~--~~i- 141 (404)
T PRK14012 80 NLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGII---------------DLEKLE--AAM- 141 (404)
T ss_pred HHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcC---------------CHHHHH--Hhc-
Confidence 99887763 467899999999999987776666678999999998876666 688898 555
Q ss_pred CCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEec
Q 010538 194 ERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSF 273 (508)
Q Consensus 194 ~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~ 273 (508)
+++|++|++++++|+||.+.|+++|.++|++ +|+++++|++|++|..++++..+++|++++|+
T Consensus 142 -----~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~------------~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~ 204 (404)
T PRK14012 142 -----RDDTILVSIMHVNNEIGVIQDIAAIGEICRE------------RGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSA 204 (404)
T ss_pred -----CCCCEEEEEECcCCCccchhhHHHHHHHHHH------------cCCEEEEEcchhcCCcccCcccCCCCEEEEeh
Confidence 5678999999999999999999999999998 89999999999999999999999999999999
Q ss_pred cccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHH
Q 010538 274 YKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPA 353 (508)
Q Consensus 274 ~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 353 (508)
||++| |.|+|+++++++...++.|...|++. .++++.||+++..++++.++++++.. +.+.
T Consensus 205 ~K~~g-p~g~G~l~~~~~~~~~~~~~~~g~~~-----------------~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~ 265 (404)
T PRK14012 205 HKIYG-PKGIGALYVRRKPRVRLEAQMHGGGH-----------------ERGMRSGTLPTHQIVGMGEAARIAKE-EMAT 265 (404)
T ss_pred hhccC-CCceEEEEEecCCCCCCCceecCCCc-----------------cCCccCCCcCHHHHHHHHHHHHHHHh-hHHH
Confidence 99887 98999999998865556665555432 34577899999999999999998754 5788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCc--eEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 354 ICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGS--MVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 354 i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
+.++..++++++.+.|+++ +++++.++... +..+ .++|.+.+ . .++.+.| +++.|++|
T Consensus 266 ~~~~~~~l~~~l~~~L~~~------~~i~~~~~~~~-----~~~~~~~~~~~~~~--~-----~~~~~~l--~~~~i~~g 325 (404)
T PRK14012 266 ENERIRALRDRLWNGIKDI------EEVYLNGDLEQ-----RVPGNLNVSFNYVE--G-----ESLIMAL--KDLAVSSG 325 (404)
T ss_pred HHHHHHHHHHHHHHHHhcC------CCEEEeCCccc-----cCCCEEEEEEeCcC--H-----HHHHHhC--CCeEEEch
Confidence 8999999999999999887 46777654321 1123 45555432 1 2355655 48888999
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
..|.+... .++..+.+++.. .....+.||+|++.++|++||+++++.|+++++.++.
T Consensus 326 ~~~~~~~~------~~~~~~~~~~~~----------~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 326 SACTSASL------EPSYVLRALGLN----------DELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred hhhCCCCC------CCCHHHHHcCCC----------hhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88876431 223344444421 1123689999999999999999999999998877654
No 22
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=2.6e-37 Score=320.08 Aligned_cols=361 Identities=12% Similarity=0.061 Sum_probs=265.2
Q ss_pred hccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcC-Ch
Q 010538 34 FKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTS-GA 112 (508)
Q Consensus 34 f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~-g~ 112 (508)
.|.+.+..+||+.+.+++++..|++++...+. +..+. +..+.+.++++|+.+++++|++.. |+|+|++ |+
T Consensus 6 ~~~~~~~~~~f~~Gp~~~~~~~v~~a~~~~~~----~~~hr----~~~f~~~~~~~r~~l~~l~~~~~~-~~v~~~~gs~ 76 (378)
T PRK03080 6 IPALRPADPRFSSGPCKKRPGWQLEALADALL----GRSHR----QKPVKALLKRVIEGTRELLSLPEG-YEVGIVPGSD 76 (378)
T ss_pred CCCcCCCCCCcCCCCcCCChHHHHHHHHhhhc----ccCcC----CHHHHHHHHHHHHHHHHHhCCCCC-ceEEEECCch
Confidence 35554678999999888755548888764332 12222 235678999999999999999542 3799885 99
Q ss_pred HHHHHHHHhhcCCCC-CCeEEEecccccchHHHHHH-HHhcCC-eEEEEccCCccCccccccccccccccccchhhhhcC
Q 010538 113 TAALKLVGEAFPWSH-QSSYMYTMENHNSVLGIREY-ALSQGA-AAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 113 t~al~~~~~~l~~~~-g~~vl~~~~~h~s~~~~~~~-~~~~G~-~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
|.++++++.++ +++ +..|+. ..+|++ .|... .++.|+ +++.++.+..... |+++++
T Consensus 77 T~~~~~~~~~l-~~~~~~~vi~-~g~f~~--~~~~~~~~~~g~~~v~~~~~~~g~~~---------------d~~~i~-- 135 (378)
T PRK03080 77 TGAWEMALWSL-LGARRVDHLA-WESFGS--KWATDVVKQLKLEDPRVLEADYGSLP---------------DLSAVD-- 135 (378)
T ss_pred HHHHHHHHHhc-CCCCcceEEE-eCHHHH--HHHHHHHhhcCCCCceEeccCCCCCC---------------CHhhcC--
Confidence 99999999998 554 444544 578877 45553 356788 9999987644333 344443
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEE
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFV 269 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~ 269 (508)
. +++|+++|++|.||.++|+++|.+ |+ +|++++||++|++|+.|+|+.+ +||+
T Consensus 136 ----------~-~~~V~~~h~~t~tG~~~pi~~I~~--~~------------~g~~~vVDa~qs~G~~pidv~~--iD~~ 188 (378)
T PRK03080 136 ----------F-DRDVVFTWNGTTTGVRVPVARWIG--AD------------REGLTICDATSAAFALPLDWSK--LDVY 188 (378)
T ss_pred ----------C-CCCEEEEecCCccceeccchhhcc--cc------------CCCeEEEecccccccCCCCHHH--CcEE
Confidence 1 467999999999999999999988 65 8999999999999999999997 7999
Q ss_pred EEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC---CCCChhHHHHHHHHHHHH
Q 010538 270 VMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED---GTASFLSIASIRHGFNLI 346 (508)
Q Consensus 270 ~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---gt~~~~~~~~l~~al~~~ 346 (508)
++|+|||+++|.|+|++++++++++++.|...+|.... ..++.........+++. +|+++..++++.++++++
T Consensus 189 ~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l 264 (378)
T PRK03080 189 TFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPK----FFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWA 264 (378)
T ss_pred EEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCch----hheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHH
Confidence 99999999889999999999999998888765553211 11111000011223443 456777788889999999
Q ss_pred Hhc-ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 347 NSL-TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 347 ~~~-g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
.+. |++.+.+|++++++++++.|+++. +++++.+... .+...+++|++++.+. ..+. ++.+.|.++|
T Consensus 265 ~~~gG~e~i~~r~~~l~~~l~~~l~~~~------~~~~~~~~~~----~~s~~i~~~~~~~~~~-~~~~-~~~~~l~~~~ 332 (378)
T PRK03080 265 NSIGGLDALIARTAANASVLYDWAEKTP------WATPLVADPA----TRSNTSVTLDFVDAQA-AVDA-AAVAKLLREN 332 (378)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhCC------CcccccCCcc----ccCccEEEEEcCCchH-HHHH-HHHHHHHHcC
Confidence 998 899999999999999999999883 5677653221 1224689998876110 0112 2455566679
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
|.++.|.+|. ..+.+|+|+++|||.+||++++++|+++++-+
T Consensus 333 i~v~~g~~~~-----------------------------------~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 333 GAVDIEPYRD-----------------------------------APNGLRIWCGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred CeeccccccC-----------------------------------CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9988865431 14789999999999999999999999876643
No 23
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=2.9e-36 Score=314.73 Aligned_cols=362 Identities=14% Similarity=0.033 Sum_probs=280.6
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
++..+|.+.+.+..++.+++++..... .+ .+....++++++++.+++++|++.++ .+++++++|.+++.
T Consensus 7 ~~~~~l~~pGP~~~~~~V~~a~~~~~~------~~----~~~~~~~~~~~~~~~l~~~~g~~~~~-~vi~~~~gt~a~~~ 75 (401)
T PLN02409 7 PGRNHLFVPGPVNIPERVLRAMNRPNE------DH----RSPAFPALTKELLEDVKYIFKTKSGT-PFIFPTTGTGAWES 75 (401)
T ss_pred CCCceeccCCCCCCCHHHHHHhcCCCC------CC----CCHHHHHHHHHHHHHHHHHhCCCCCC-EEEEeCCcHHHHHH
Confidence 456788889999999999988744221 11 13346778999999999999997642 78999999999999
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
++.++ +++|++|+++..+|++.. |...+++.|++++.++.+....+ ++++++ +++++. .
T Consensus 76 a~~~~-~~~Gd~Vlv~~~~~~~~~-~~~~~~~~g~~v~~v~~~~~~~~---------------~~~~l~--~~l~~~--~ 134 (401)
T PLN02409 76 ALTNT-LSPGDKVVSFRIGQFSLL-WIDQMQRLNFDVDVVESPWGQGA---------------DLDILK--SKLRQD--T 134 (401)
T ss_pred HHHhc-CCCCCEEEEeCCCchhHH-HHHHHHHcCCceEEEECCCCCCC---------------CHHHHH--HHHhhC--c
Confidence 99887 789999999988887654 56777888999999998754334 577887 665321 0
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHH--HcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIM--KKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKI 276 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l--~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~ 276 (508)
.+++++|+++|++|+||.++|+++|.++ |++ +|+++++|++|++|..|+|+.++++|++++|+|||
T Consensus 135 ~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~------------~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~ 202 (401)
T PLN02409 135 NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQ------------HPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKA 202 (401)
T ss_pred CCCccEEEEEeecccccccCCHHHHHHHHhhhc------------cCcEEEEEcccccCCccccccccCccEEEEcCccc
Confidence 1378999999999999999999999999 887 89999999999999999999999999999999999
Q ss_pred ccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccC-ccccccCCCCChhHHHHHHHHHHHHHhcChHHHH
Q 010538 277 FGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQG-VEELFEDGTASFLSIASIRHGFNLINSLTVPAIC 355 (508)
Q Consensus 277 ~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~ 355 (508)
+++|.|+|++++++++++++.+.-..... .+|...... ....++.+|++++.++++.++++++.+.|+++++
T Consensus 203 l~~P~G~G~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~ 275 (401)
T PLN02409 203 LSLPTGLGIVCASPKALEASKTAKSPRVF-------FDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
T ss_pred cCcCCCcceeEECHHHHHHHhcCCCCCee-------cCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHH
Confidence 98799999999999998877653111000 001000000 0112346799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hhCCCeeccCCCC
Q 010538 356 RHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SLSGIQLRTGCFC 434 (508)
Q Consensus 356 ~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~g~~~ 434 (508)
+++.++++++++.|+++ +++++.+... .+...+++|.++.. ++..++.+.| +++||.+..|..+
T Consensus 276 ~~~~~l~~~l~~~L~~~-------g~~~~~~~~~----~~s~~v~~~~~p~~----~~~~~l~~~l~~~~~i~i~~G~~~ 340 (401)
T PLN02409 276 ARHARLGEATRLAVEAW-------GLKLCTKKPE----WRSDTVTAVVVPEG----IDSAEIVKNAWKKYNLSLGLGLNK 340 (401)
T ss_pred HHHHHHHHHHHHHHHHc-------CCeeccCChh----hcccceEEEeCCCC----CCHHHHHHHHHHhCCEEEEcCCCc
Confidence 99999999999999886 6888875321 12346677877532 3334466555 6789999987531
Q ss_pred CchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 435 NPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 435 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.+++.+||+.+.|+|.+|+.+++.++.+.++-
T Consensus 341 -----------------------------------~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 341 -----------------------------------VAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred -----------------------------------ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 13678999999999999999999999986653
No 24
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.1e-34 Score=298.17 Aligned_cols=350 Identities=13% Similarity=0.067 Sum_probs=266.4
Q ss_pred CCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCC
Q 010538 46 HAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPW 125 (508)
Q Consensus 46 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~ 125 (508)
+++..++++.+++++.+... . ..+....+..+++++.+++++|+++.. .+++++|+|+++.+++.++ .
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~-------~---~~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~-~ 71 (356)
T cd06451 4 IPGPSNVPPRVLKAMNRPML-------G---HRSPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNL-L 71 (356)
T ss_pred cCCCcCCCHHHHHHhCCCcc-------C---CCCHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHh-C
Confidence 35666678888887643211 1 112234567889999999999995431 6889999999999999998 5
Q ss_pred CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEE
Q 010538 126 SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLF 205 (508)
Q Consensus 126 ~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv 205 (508)
.+|+.|+++...|++. .+...++..|++++.+|.+.+..+ |+++++ ++++ .+++++|
T Consensus 72 ~~g~~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~---------------~~~~l~--~~i~-----~~~~~~v 128 (356)
T cd06451 72 EPGDKVLVGVNGVFGD-RWADMAERYGADVDVVEKPWGEAV---------------SPEEIA--EALE-----QHDIKAV 128 (356)
T ss_pred CCCCEEEEecCCchhH-HHHHHHHHhCCCeEEeecCCCCCC---------------CHHHHH--HHHh-----ccCCCEE
Confidence 7899999987777653 244556678999999998765444 578888 5552 1378999
Q ss_pred EEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceE
Q 010538 206 AFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGA 285 (508)
Q Consensus 206 ~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~ 285 (508)
++++++|++|.+.|+++|.++|++ +|+++++|++|++|..++++...++|++++|+|||+++|.|+|+
T Consensus 129 ~i~~~~~~~G~~~~~~~i~~~a~~------------~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~ 196 (356)
T cd06451 129 TLTHNETSTGVLNPLEGIGALAKK------------HDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGP 196 (356)
T ss_pred EEeccCCCcccccCHHHHHHHHHh------------cCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcce
Confidence 999999999999999999999998 89999999999999999999888999999999999998989999
Q ss_pred EEEechhHhhhcc--ccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 010538 286 LIMRNDAAKLLKN--TYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGM 363 (508)
Q Consensus 286 l~~~~~~~~~l~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 363 (508)
+++++++++.+.+ ...++.. ... .+... .....++.+++++..++++.++++++.+.|++.+.++..++++
T Consensus 197 l~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~--~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~ 269 (356)
T cd06451 197 IAFSERALERIKKKTKPKGFYF---DLL--LLLKY--WGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAK 269 (356)
T ss_pred eEECHHHHHHHHhcCCCCceee---cHH--HHHhh--hcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999998877653 2222110 000 00000 0122367789999999999999999988899999999999999
Q ss_pred HHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhC-CCeeccCCCCCchHHHhh
Q 010538 364 YVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLS-GIQLRTGCFCNPGACAKY 442 (508)
Q Consensus 364 ~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~~~~ 442 (508)
++++.|.++ +++++.++.. +.+.++++.++.. .+...+.+.|.++ ||.+++|..|.
T Consensus 270 ~l~~~L~~~-------g~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~L~~~~gI~~~~g~~~~------- 326 (356)
T cd06451 270 ALREGLEAL-------GLKLLAKPEL-----RSPTVTAVLVPEG----VDGDEVVRRLMKRYNIEIAGGLGPT------- 326 (356)
T ss_pred HHHHHHHHc-------CCeeccCccc-----CCCceEEEECCCC----CCHHHHHHHHHHhCCEEEecccccc-------
Confidence 999999986 6777755321 2234445665432 2445688999888 99999876432
Q ss_pred cCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 443 LGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 443 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.++++|+|++.++|.+||++++++|++.++
T Consensus 327 ----------------------------~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 327 ----------------------------AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ----------------------------cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 146899999999999999999999988653
No 25
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=6.9e-34 Score=293.22 Aligned_cols=330 Identities=12% Similarity=0.027 Sum_probs=250.0
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 81 ATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 81 ~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
.+...++++|+.+++++|++++..+|++|+|+|+|++.++.++..+++++|++...+|+.. +...+++.|++++.++.
T Consensus 32 ~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 32 DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeC
Confidence 4667889999999999999753116999999999999999998554555566666666542 23556778999999998
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+.++.+ |+++++ +++++ .++++++++++++|+||.++|+++|.++||+
T Consensus 110 ~~~~~~---------------d~~~l~--~~l~~----~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~----------- 157 (363)
T TIGR02326 110 GEVEPP---------------DVVEVE--AILAA----DPAITHIALVHCETTTGILNPIEAVAKLAHR----------- 157 (363)
T ss_pred CCCCCC---------------CHHHHH--HHHhh----CCCccEEEEEeecCCccccCcHHHHHHHHHH-----------
Confidence 765555 578888 66532 2456889999999999999999999999998
Q ss_pred CCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 241 KGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
+|+++++|++|++|..|+++.++++|++++|+|||+++|.|+|+++++++.++.+.+...+.. ... ...|... .
T Consensus 158 -~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~-~ 231 (363)
T TIGR02326 158 -HGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLS---LDL-YDQWRCM-E 231 (363)
T ss_pred -cCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCcee---ecH-HHHHHHH-h
Confidence 999999999999999999999999999999999988669999999999998776554321110 000 0001000 0
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCce
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSL-TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (508)
. .......|++.+.++++.++++.+.+. |++++.+++.++++++++.|+++ +++++.++.. +.+.+
T Consensus 232 ~-~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~~-----~~~~~ 298 (363)
T TIGR02326 232 D-NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-------GFEPLLDDEI-----QSPII 298 (363)
T ss_pred c-cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-------CCeeccCccc-----CCceE
Confidence 0 011122367888999999999877554 68999999999999999999887 5777655432 22345
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
++|.+++..+ ++...+.+.|.++||.+++|..+ ..+++|||+
T Consensus 299 ~~~~~~~~~~--~~~~~v~~~L~~~gi~v~~g~~~------------------------------------~~~~iRi~~ 340 (363)
T TIGR02326 299 TSFYSPEDPD--YRFADFYQRLKEQGFVIYPGKVS------------------------------------QVDCFRIGN 340 (363)
T ss_pred EEEECCCCCC--CCHHHHHHHHHHCCEEEECCcCC------------------------------------CCCEEEEec
Confidence 6788764211 23446888999999999987532 146899999
Q ss_pred CCCCCHHHHHHHHHhhhhhhhh
Q 010538 480 GYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~~~~~~~ 501 (508)
+.++|.+|+++++++|++++.|
T Consensus 341 ~~~~~~edv~~~l~~l~~~l~~ 362 (363)
T TIGR02326 341 IGEVDAADITRLLTAIGKAMYW 362 (363)
T ss_pred CCCCCHHHHHHHHHHHHHHhCC
Confidence 9899999999999999998765
No 26
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=2e-34 Score=296.19 Aligned_cols=342 Identities=16% Similarity=0.161 Sum_probs=245.0
Q ss_pred CCCCCCCHHHHHHHHHHhhccccCCCCCc-cchh---hhhhHHHHHHHHHHHHHcCCCCCCceEEEcCC-hHHHHHHHHh
Q 010538 47 AGATLYSELQMEAIFRDFTTNVYGNPHSQ-SDIS---LATCDIVRAAREQVLDYFNASMKDYKCIFTSG-ATAALKLVGE 121 (508)
Q Consensus 47 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g-~t~al~~~~~ 121 (508)
++.+++|+.|++++.+.+ .+. +|++.. +..+ ....+.++++|+.+++++|++.+ ++|+||+| +|+++++++.
T Consensus 5 pGp~~~p~~V~~a~~~~~-~~~-~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~-~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 5 AGPAALPEEVLEQAQKEL-LDF-NGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN-YKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCCCCHHHHHHHHHHH-hhc-ccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHH
Confidence 556677999999986644 333 366642 3333 45668999999999999998432 38999988 9999999999
Q ss_pred hcCC--CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCC
Q 010538 122 AFPW--SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAG 199 (508)
Q Consensus 122 ~l~~--~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~ 199 (508)
++.. .++++|++...+| .+.+.+++.|++++.++.+.++.+.+. ++..+ . ..+
T Consensus 82 ~l~~~~~~~~~i~~g~~~~----~~~~~a~~~g~~~~~~~~~~~g~~~~~-------------~~~~~--~------~~~ 136 (355)
T cd00611 82 NLLGDKGTADYVVTGAWSA----KAAKEAKRYGGVVVIVAAKEEGKYTKI-------------PDVET--W------DLA 136 (355)
T ss_pred hcCCCCCeEEEEECCHHHH----HHHHHHHhcCCCcEEEecccccCCCCC-------------CCHhh--c------CCC
Confidence 9932 3566776644333 345577888999999987644322110 11222 1 125
Q ss_pred CCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccC
Q 010538 200 DAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGY 279 (508)
Q Consensus 200 ~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~ 279 (508)
++|++|+++|++|.||..++ ++++. +|++++||++|++|+.|+|+.+++ ++++|+||+||
T Consensus 137 ~~~~lV~~~h~~t~tG~~~~-----~i~~~------------~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lG- 196 (355)
T cd00611 137 PDAAYVHYCSNETIHGVEFD-----EVPDT------------GGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLG- 196 (355)
T ss_pred CCCCEEEEeCCcccccEEcc-----eeccc------------CCCeEEEEccccccCCCCCHHHhC--EEEeecccccC-
Confidence 78999999999999999843 34444 899999999999999999999866 45577999998
Q ss_pred CCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc-ChHHHHHHH
Q 010538 280 PTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL-TVPAICRHI 358 (508)
Q Consensus 280 P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~ 358 (508)
|+|+|++++++++++++.|..... ..+.... ......||||+.+++++.++++++.+. |++.+.+|.
T Consensus 197 P~G~g~l~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~ 264 (355)
T cd00611 197 PAGVTVVIVRKDLLGKARKITPSM---------LNYKTHA---DNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRN 264 (355)
T ss_pred CCceEEEEECHHHHhhcccCCCCc---------ccHHHHH---hcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999998877652211 0111100 111236899999999999999999998 899999999
Q ss_pred HHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchH
Q 010538 359 ASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGA 438 (508)
Q Consensus 359 ~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~ 438 (508)
+++++++++.|++++ |+.. .+.... .+.+.+++|++++. .+. .+....+.+.|+.+..+..
T Consensus 265 ~~l~~~l~~~l~~~~------gl~~-~~~~~~---~rs~~vvsf~~~~~---~l~-~~~~~~~~r~G~~~~~~~~----- 325 (355)
T cd00611 265 RQKAQLLYDTIDNSN------GFYR-GPVDKR---ARSRMNVPFRLGKE---ELE-KEFLKEAEAAGMIGLKGHR----- 325 (355)
T ss_pred HHHHHHHHHHHHhCc------cccc-cCCCHH---HcCceEEEEEcCCh---hhh-HHHHHHHHHCCCcccCCCc-----
Confidence 999999999999984 5411 111110 12235699998764 111 1233455557776444321
Q ss_pred HHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 439 CAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 439 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
..+.+|+|+++|||.+||++|+++|+++.
T Consensus 326 --------------------------------~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 326 --------------------------------SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred --------------------------------ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 14789999999999999999999998864
No 27
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.7e-32 Score=286.16 Aligned_cols=357 Identities=13% Similarity=0.064 Sum_probs=264.2
Q ss_pred CCCeeeeCCC--------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-C-CCceEEE
Q 010538 39 NGTVYLDHAG--------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-M-KDYKCIF 108 (508)
Q Consensus 39 ~~~iyld~~~--------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~-~~~~i~~ 108 (508)
...+|+|+++ ++++.|.+.+.+.. .+...++||.+. +.. .++.+++++++++++|++ + + ++.+
T Consensus 32 ~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~-~l~~~~~np~s~---~~~-~~le~~~~~~la~llg~~~~~~--~~~g 104 (431)
T TIGR01788 32 HDELSLDGNPRLNLATFVTTWMEPEARKLMDE-TINKNMIDKDEY---PQT-AEIENRCVNMLADLWHAPAKDA--EAVG 104 (431)
T ss_pred HHHhhhcCCcceeeeeeeCCCCCHHHHHHHHH-HHhcCCCCcccC---ccH-HHHHHHHHHHHHHHhCCCCCCC--CCeE
Confidence 3477899998 89989988777655 444445666542 223 388999999999999998 3 4 4555
Q ss_pred --cCChHHHHHHHHhhcCC-------CC-----CCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCcccccccc
Q 010538 109 --TSGATAALKLVGEAFPW-------SH-----QSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGLSESL 173 (508)
Q Consensus 109 --t~g~t~al~~~~~~l~~-------~~-----g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l~~~~ 173 (508)
|+|+|+|+++++.+... +. ..+|++++.+|+++....+. .|++++.||++.. +.+
T Consensus 105 ~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~---lg~~v~~i~~d~~~~~v------- 174 (431)
T TIGR01788 105 TSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY---FDVELREVPMDPGRYVI------- 174 (431)
T ss_pred EEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH---cCceeEEEecCCCceee-------
Confidence 89999999988765421 11 24799999999988766554 4899999999864 355
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC------CeEEE
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG------RWMVL 247 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~------g~~vi 247 (508)
|+++++ ++| +++|.+|++++++|.||.+.|+++|.++|++ + |++++
T Consensus 175 --------d~~~L~--~~i------~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~------------~~~~~~~~~~~H 226 (431)
T TIGR01788 175 --------DPEQVV--EAV------DENTIGVVCILGTTYTGEYEDVKALNDALDE------------YNAKTGWDIPIH 226 (431)
T ss_pred --------CHHHHH--HHH------hhCCeEEEEEeCCCCCcccCCHHHHHHHHHH------------HHhhhCCCceEE
Confidence 688888 555 4678999999999999999999999999997 7 89999
Q ss_pred Eecccc-------CCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechh--Hhhhc--cccccCceEEecccchhhh
Q 010538 248 IDAAKG-------CVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDA--AKLLK--NTYFSGGTVAASIADIDFV 316 (508)
Q Consensus 248 vD~a~~-------~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~--~~~l~--~~~~g~~~~~~~~~~~~~~ 316 (508)
||++|+ .+..+.++...++|++++|+|||+.+|.|+|+++++++. ...+. +.+.++...
T Consensus 227 vDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~---------- 296 (431)
T TIGR01788 227 VDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEP---------- 296 (431)
T ss_pred EecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCC----------
Confidence 999999 566677777668899999999987449999999998762 11121 113332110
Q ss_pred hhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCC
Q 010538 317 KRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDT 396 (508)
Q Consensus 317 ~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 396 (508)
.... .++.+....++++..+..+...|++++.+++.+++++|.+.|++. ++++++.+.. +
T Consensus 297 ------~~t~-~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~------~~~el~~~~~-------~ 356 (431)
T TIGR01788 297 ------TFTL-NFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL------GPFEIISDGS-------G 356 (431)
T ss_pred ------Ccce-ecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC------CCEEEeeCCC-------C
Confidence 0011 123333344556777777778899999999999999999999998 4799997632 2
Q ss_pred CceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEE
Q 010538 397 GSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIR 476 (508)
Q Consensus 397 ~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iR 476 (508)
.++|+|++++.+....+..++.+.|.++|+.+..- ..+.. + ...-.+|
T Consensus 357 ~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~---~~p~~--------------~---------------~~~~~lR 404 (431)
T TIGR01788 357 IPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAY---TLPKN--------------A---------------EDIVVMR 404 (431)
T ss_pred ceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCC---CCCCc--------------c---------------CCeEEEE
Confidence 79999999753322355667999999999976431 11110 0 0135699
Q ss_pred EecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 477 VSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 477 is~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+++....+.+-++.+++.|++.+..+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 405 IVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 99998999999999999999887654
No 28
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.1e-32 Score=283.96 Aligned_cols=340 Identities=14% Similarity=0.073 Sum_probs=266.2
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
....|+.+......+...+++++... .+.++||.+.+..+....++.+++++++|+++|+++++...+||+|+|++++.
T Consensus 21 ~~~~~~g~p~~~~~~~~~~~~~~~~~-~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~ 99 (380)
T PRK02769 21 NQYFNVGYPEAADFDYSALKRFFSFS-INNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLY 99 (380)
T ss_pred hhhcccCCCchhhcCHHHHHHHHHhh-hccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHH
Confidence 45667777777776667777776644 34567888766556667788889999999999998762124899999999876
Q ss_pred HHhhc-CCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 119 VGEAF-PWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 119 ~~~~l-~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
++.+. .+.++++|++++.+|+|+....+.+ |.+.+.||.+.++.+ |+++++ ++|++.
T Consensus 100 a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l---g~~~~~V~~~~~g~i---------------d~~~L~--~~i~~~-- 157 (380)
T PRK02769 100 GCYLARELFPDGTLYYSKDTHYSVSKIARLL---RIKSRVITSLPNGEI---------------DYDDLI--SKIKEN-- 157 (380)
T ss_pred HHHHHHHhCCCcEEEeCCCceehHHHHHHHc---CCCCceeccCCCCcC---------------cHHHHH--HHHHhC--
Confidence 65443 2356789999999999988666554 777778888766666 688888 666432
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC---eEEEEeccccCCCCC-------CCCCCCCCc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR---WMVLIDAAKGCVTQP-------PDLSKYPVD 267 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g---~~vivD~a~~~g~~~-------~d~~~~~~D 267 (508)
+.+|.+|++++++|+||.+.|+++|.++|++ +| ++++||++|+.+..| +|+.. ++|
T Consensus 158 -~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~------------~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vD 223 (380)
T PRK02769 158 -KNQPPIIFANIGTTMTGAIDNIKEIQEILKK------------IGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GID 223 (380)
T ss_pred -CCCcEEEEEEeCCCCCcccCCHHHHHHHHHH------------hCCCceEEEEEecccceeecccCccccCCccC-CCC
Confidence 4569999999999999999999999999997 77 799999999998885 77777 899
Q ss_pred EEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN 347 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 347 (508)
++++|+|||+++|.|+|+++++++....+.+.. .+. ........||++....++++++++++.
T Consensus 224 sis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~------~yl-----------~~~d~t~~GSR~g~~~l~lw~aL~~lg 286 (380)
T PRK02769 224 SIAISGHKFIGSPMPCGIVLAKKKYVERISVDV------DYI-----------GSRDQTISGSRNGHTALLLWAAIRSLG 286 (380)
T ss_pred EEEECCcccCCCCCCcEEEEEehhhhhhcccCc------ccc-----------CCCCCCccCCCCcHHHHHHHHHHHHHC
Confidence 999999999888999999999998766554310 000 001224579999999999999999999
Q ss_pred hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCe
Q 010538 348 SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQ 427 (508)
Q Consensus 348 ~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~ 427 (508)
..|++++.+++.++++++.+.|++. +++++..+. .++|+|..++. .+. +|..
T Consensus 287 ~~G~~~~~~~~~~la~~l~~~L~~~-------g~~~~~~p~--------~~~v~f~~~~~--------~~~-----~~w~ 338 (380)
T PRK02769 287 SKGLRQRVQHCLDMAQYAVDRLQAN-------GIPAWRNPN--------SITVVFPCPSE--------RIW-----KKWH 338 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-------CCEEEcCCC--------ceEEEEcCCCH--------HHH-----hCee
Confidence 9999999999999999999999885 688887654 78888875431 121 5655
Q ss_pred eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 428 LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 428 v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+.+- .+.+|+.+...+|.+.||.+++-|.....
T Consensus 339 l~~~----------------------------------------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 339 LATS----------------------------------------GNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred Eccc----------------------------------------CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 5431 35899999999999999999988776554
No 29
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=4.6e-32 Score=277.12 Aligned_cols=339 Identities=16% Similarity=0.125 Sum_probs=245.8
Q ss_pred CCCHHHHHHHHHHhhccccCCCCC-ccch---hhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCC-hHHHHHHHHhhcCC
Q 010538 51 LYSELQMEAIFRDFTTNVYGNPHS-QSDI---SLATCDIVRAAREQVLDYFNASMKDYKCIFTSG-ATAALKLVGEAFPW 125 (508)
Q Consensus 51 ~~~~~~~~a~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g-~t~al~~~~~~l~~ 125 (508)
++|.+|++++.+.+ .+.. +.+. .+.. +....++++++++.++++++++.+ |+|+|++| +|.|++.++.++ .
T Consensus 2 ~~p~~v~~~~~~~~-~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl-~ 77 (349)
T TIGR01364 2 ALPEEVLEQAQKEL-LNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNL-L 77 (349)
T ss_pred CCCHHHHHHHHHHH-hCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhc-C
Confidence 46888999886654 3322 4443 2322 344558999999999999998433 47888866 999999999998 4
Q ss_pred CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc-CccccccccccccccccchhhhhcCCCCCCCCCCCCCceE
Q 010538 126 SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV-DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNL 204 (508)
Q Consensus 126 ~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~-~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~l 204 (508)
.+++.+++.....-+ ..|.+.+++.|+ +..+..+..+ ..+.+ ++++++ .++++++
T Consensus 78 ~~~~~~l~i~~G~fg-~r~~~~a~~~g~-~~~~~~~~~~~~~~~~------------~~~~~~----------~~~~~~~ 133 (349)
T TIGR01364 78 AEGKVADYIVTGAWS-KKAAKEAKKYGV-VNVVASGKEGNYTKIP------------DPSTWE----------ISEDAAY 133 (349)
T ss_pred CCCCeEEEEECCHHH-HHHHHHHHHhCC-cEEEeccccCCCCCCC------------CHHhcC----------CCCCCCE
Confidence 466665544322222 246788888898 7777654322 11111 334333 1357899
Q ss_pred EEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcce
Q 010538 205 FAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLG 284 (508)
Q Consensus 205 v~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G 284 (508)
|+++|+.|.||...| ++++. ++++++||++|++|+.|+|+.++ |++++|+||++| |+|+|
T Consensus 134 v~~th~ETstGv~~~-----~l~~~------------~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~lg-P~Glg 193 (349)
T TIGR01364 134 VHYCANETIHGVEFR-----ELPDV------------KNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNIG-PAGLT 193 (349)
T ss_pred EEEcCCCCcccEecc-----eeccc------------CCCeEEEEccccccCccCCHHHc--cEEEEecccccC-CCceE
Confidence 999999999999887 55554 89999999999999999999975 599999999998 99999
Q ss_pred EEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc-ChHHHHHHHHHHHH
Q 010538 285 ALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL-TVPAICRHIASLGM 363 (508)
Q Consensus 285 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~~~l~~ 363 (508)
++++++++++++.|.... ..+|.... ......||||+..++++.++++++.+. |++++.+|..++++
T Consensus 194 ~l~~s~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~ 261 (349)
T TIGR01364 194 VVIVRKDLLGRASRITPS---------MLNYKIHA---ENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ 261 (349)
T ss_pred EEEECHHHHhhcccCCCC---------cchHHHHH---hcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999887763211 11121110 112335899999999999999999998 79999999999999
Q ss_pred HHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhc
Q 010538 364 YVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYL 443 (508)
Q Consensus 364 ~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~ 443 (508)
++++.|++++ |+........ .+...+++|.+++. .++ .++.+.+.++|+.+..|..
T Consensus 262 ~l~~~l~~~~------gl~~~~~~~~----~rs~~v~sf~~~~~---~~~-~~~~~~~~~~Gi~~~~~~~---------- 317 (349)
T TIGR01364 262 LLYDTIDNSN------GFYRNPVDPR----NRSRMNVVFTLGNE---ELE-KRFLKEAEERGLVSLKGHR---------- 317 (349)
T ss_pred HHHHHHHhCC------CeeccCCCHH----HcCCeEEEEecCCh---hHh-HHHHHHHHHCCCcccCCcc----------
Confidence 9999999983 5544432111 12246799998754 121 2355677778887666531
Q ss_pred CCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 444 GLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 444 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..+.+|+|+++|||.|||++|+++|+++.+
T Consensus 318 ---------------------------~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 318 ---------------------------SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ---------------------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 147899999999999999999999998654
No 30
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.2e-31 Score=277.00 Aligned_cols=327 Identities=13% Similarity=0.064 Sum_probs=245.4
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccC
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~ 161 (508)
+.+.++++++.+++++|++++...|++++|+|.+++.++.++. .+++.+++....+.+. .+...++..|++++.+|.+
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~~-~~~~~~~~~g~~~~~i~~~ 112 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYGA-RIAQIAEYLGIAHVVLDTG 112 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchHH-HHHHHHHHcCCcEEEEECC
Confidence 4467899999999999996532268899999999999999995 5556665554333222 2346677789999999987
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
.+..+ |+++++ +++.+ .+++++|++++++|+||.+.|+++|.++|++
T Consensus 113 ~~~~~---------------d~~~l~--~~l~~----~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~------------ 159 (368)
T PRK13479 113 EDEPP---------------DAAEVE--AALAA----DPRITHVALVHCETTTGILNPLDEIAAVAKR------------ 159 (368)
T ss_pred CCCCC---------------CHHHHH--HHHHh----CCCCcEEEEEcccCccccccCHHHHHHHHHH------------
Confidence 55444 578887 55532 2467889999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccc-hhhhhhcc
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIAD-IDFVKRRQ 320 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~-~~~~~~~~ 320 (508)
+|+++++|++|++|..++++.++++|++++|+|||+++|.|+|+++++++.++.+.+....+ ..+. ..+.....
T Consensus 160 ~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 234 (368)
T PRK13479 160 HGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSL-----SLDLYDQWAYMEK 234 (368)
T ss_pred cCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCe-----eecHHHHHhhhcc
Confidence 89999999999999999999999999999999998766999999999999887766532211 0000 00100000
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCce
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSL-TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (508)
... ...|+++..++++.++++.+.+. +++++.+++.++++++++.|+++ +++++.++.. +...+
T Consensus 235 ~~~---~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~~-----~~~~~ 299 (368)
T PRK13479 235 TGQ---WRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-------GFEPLLDAEI-----QSPII 299 (368)
T ss_pred cCC---CCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCchh-----cCceE
Confidence 111 22378889999999999977554 58999999999999999999887 5776654321 22456
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
++|.++..++ ++..++.+.|.++||.+++|..+ ..+++|+|.
T Consensus 300 ~~~~~~~~~~--~~~~~l~~~L~~~gi~v~~g~~~------------------------------------~~~~iRis~ 341 (368)
T PRK13479 300 VTFHAPADPA--YDFKEFYERLKEQGFVIYPGKLT------------------------------------QVDTFRIGC 341 (368)
T ss_pred EEEECCCCCC--cCHHHHHHHHHHCCEEEecCCCC------------------------------------CCCEEEEec
Confidence 7777654321 23456888999999999876321 135799999
Q ss_pred CCCCCHHHHHHHHHhhhhhhhh
Q 010538 480 GYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~~~~~~~ 501 (508)
+.++|.+|+++++++|+++++.
T Consensus 342 ~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 342 IGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988764
No 31
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.2e-32 Score=291.41 Aligned_cols=354 Identities=14% Similarity=0.023 Sum_probs=264.8
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEc---CCh
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFT---SGA 112 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t---~g~ 112 (508)
.+.+-|- ++.+.++|.+++++...+ .+.| ++|++.+..|....+.++. +|+.+++++|++++ ++.++ +|+
T Consensus 34 ~~~l~l~-~sen~~s~~v~~~~~~~l-~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~--~~~~~~~~~sg 109 (452)
T PTZ00094 34 IEGLELI-ASENFTSRAVLECLGSCF-TNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPE--EWGVNVQPYSG 109 (452)
T ss_pred HcCeeEe-cccccCCHHHHHHhcchh-hccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcc--cceeecCCCch
Confidence 4566665 667778999988876644 4566 8999988888877888885 99999999999887 67677 789
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHh-------cCCeEEEEccCCccCccccccccccccccccchhh
Q 010538 113 TAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALS-------QGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 113 t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~-------~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
++++++++.++ +++|++|++++.+|++.......++. .+.++..++++.++.+ |+++
T Consensus 110 t~an~~v~~al-~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i---------------d~~~ 173 (452)
T PTZ00094 110 SPANFAVYTAL-LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLI---------------DYDK 173 (452)
T ss_pred HHHHHHHHHHh-cCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCc---------------CHHH
Confidence 99999999999 78899999999999887653322211 1233445555555555 6788
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCC--
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSK-- 263 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~-- 263 (508)
++ +.+++ .++++|++. ++.+|...|+++|.++||+ +|++++||++|++|..+.++..
T Consensus 174 L~--~~l~~-----~~~~lvi~~--~s~~g~~~di~~I~~i~~~------------~ga~l~vDaaq~~G~i~~~~~~~~ 232 (452)
T PTZ00094 174 LE--ELAKA-----FRPKLIIAG--ASAYPRDIDYKRFREICDS------------VGAYLMADIAHTSGLVAAGVLPSP 232 (452)
T ss_pred HH--HHHHH-----hCCCEEEEe--CCCCCCccCHHHHHHHHHH------------cCCEEEEeccchhccccCCCCCCC
Confidence 88 55532 245666654 3569999999999999998 8999999999999999776533
Q ss_pred -CCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHH
Q 010538 264 -YPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHG 342 (508)
Q Consensus 264 -~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~a 342 (508)
.++|++++|+|||++||.| |+++++++..+.+.+.+... .+ + .+ .|+++...++++.++
T Consensus 233 ~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~l~~~~~~~----------~~-------p-~~-~G~~~~~~iaal~~a 292 (452)
T PTZ00094 233 FPYADVVTTTTHKSLRGPRS-GLIFYRKKVKPDIENKINEA----------VF-------P-GL-QGGPHNHQIAAIAVQ 292 (452)
T ss_pred CCCCcEEEcCCccCCCCCCc-eEEEEecccchHHHHhhccc----------cC-------C-CC-CCCchHHHHHHHHHH
Confidence 2699999999998877998 88888876544333221000 00 1 12 478889999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHh
Q 010538 343 FNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLAS 422 (508)
Q Consensus 343 l~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~ 422 (508)
++++...+.+++++++.+++++|.+.|.+. |+++..+... .+..++.|..++. +...+...|+
T Consensus 293 l~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-------g~~v~~~~~~-----~~~~~v~~~~~~~-----~~~~~~~~L~ 355 (452)
T PTZ00094 293 LKEVQSPEWKEYAKQVLKNAKALAAALEKR-------GYDLVTGGTD-----NHLVLVDLRPFGI-----TGSKMEKLLD 355 (452)
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHhC-------CcEEecCCCC-----CceEeecCCcCCC-----CHHHHHHHHH
Confidence 999877788999999999999999999875 6777764321 1234444444333 3345889998
Q ss_pred hCCCee-ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC----HHHHHHHHHhhhh
Q 010538 423 LSGIQL-RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST----FEDAKVNRCSSFD 497 (508)
Q Consensus 423 ~~gI~v-~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t----~eev~~l~~~~~~ 497 (508)
++||.+ +.+..|.... ..+++||+|+++||| ++||++++++|.+
T Consensus 356 ~~gI~vs~~~~p~~~~~-------------------------------~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 356 AVNISVNKNTIPGDKSA-------------------------------LNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred HCCcEEecccCCCCCcC-------------------------------CCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 899999 5666665322 126899999999998 9999999999999
Q ss_pred hhhh
Q 010538 498 FVNF 501 (508)
Q Consensus 498 ~~~~ 501 (508)
.++.
T Consensus 405 ~~~~ 408 (452)
T PTZ00094 405 AVKL 408 (452)
T ss_pred HHHH
Confidence 8874
No 32
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=9.8e-31 Score=268.28 Aligned_cols=325 Identities=12% Similarity=0.030 Sum_probs=243.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccC
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~ 161 (508)
..+..+++|+.+++++|++++...|++++|+|+++.+++.++..+++++|++....|++. +...++..|.+++.++.+
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~ 106 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFS 106 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecC
Confidence 347799999999999999864225888999999999999998444344455555555442 234556679999999986
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
.+..+ |+++++ +++++ +++++++++++++|+||.+.|+++|.++|++
T Consensus 107 ~~~~~---------------d~~~l~--~~l~~----~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~------------ 153 (355)
T TIGR03301 107 EYEPP---------------DLNRIE--EALAA----DPDITHVATVHHETTTGILNPLEAIAKVARS------------ 153 (355)
T ss_pred CCCCC---------------CHHHHH--HHHHh----CCCceEEEEEecCCcccchhHHHHHHHHHHH------------
Confidence 55444 578888 66532 2567889999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccC
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQG 321 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (508)
+|+++++|+++++|..++++.++++|++++|+||++++|.|+|+++++++.++.+........ ... ...|....
T Consensus 154 ~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~-- 227 (355)
T TIGR03301 154 HGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLY---LDL-YDQWAYME-- 227 (355)
T ss_pred cCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCce---eeH-HHHHHHhh--
Confidence 899999999999999999999999999999999987658899999999999877653211110 000 00111000
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceE
Q 010538 322 VEELFEDGTASFLSIASIRHGFNLINSLT-VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMV 400 (508)
Q Consensus 322 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (508)
..+...+|++...++++.++++.+.+.| ++++.++++++++++.+.|+++ +++++.++.. +.+.++
T Consensus 228 -~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-------g~~~~~~~~~-----~~~~~~ 294 (355)
T TIGR03301 228 -KTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-------GFQPLLPERW-----QSPIIV 294 (355)
T ss_pred -hcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-------CCeeecCCCC-----CCCcEE
Confidence 0122345788889999999999887766 8999999999999999999886 5776655431 124467
Q ss_pred EEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC
Q 010538 401 SFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG 480 (508)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 480 (508)
++.++.... .+..++.+.|.++||.+++|..+ ..+++||+++
T Consensus 295 ~~~~~~~~~--~~~~~~~~~l~~~gi~i~~~~~~------------------------------------~~~~iRis~~ 336 (355)
T TIGR03301 295 SFLYPDDPD--FDFDDFYQELKERGFVIYPGKLT------------------------------------LADTFRIGTI 336 (355)
T ss_pred EEECCCCCc--chHHHHHHHHHHCCEEEECCccc------------------------------------cccEEEEecC
Confidence 788764211 22345889999999999886421 1368999999
Q ss_pred CCCCHHHHHHHHHhhhhh
Q 010538 481 YMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 481 ~~~t~eev~~l~~~~~~~ 498 (508)
.++|.+|++++++.|++.
T Consensus 337 ~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 337 GEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 999999999999998864
No 33
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=100.00 E-value=9.2e-31 Score=269.17 Aligned_cols=348 Identities=16% Similarity=0.109 Sum_probs=244.1
Q ss_pred CCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc-CChHHHHHHHHhhcCC
Q 010538 47 AGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT-SGATAALKLVGEAFPW 125 (508)
Q Consensus 47 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t-~g~t~al~~~~~~l~~ 125 (508)
.|.+.+++.+++++..... .. .. ....+....+.++++|+.++++++++.+ |+|+|+ +|+|.+++.++.++.
T Consensus 9 pGP~~~~~~v~~a~~~~~~-~~---~~-~~hr~~~f~~~~~~~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~~~~l~- 81 (361)
T TIGR01366 9 SGPSKVRLEQLQALTTTAA-SL---FG-TSHRQAPVKNLVGRVREGLAELFSLPDG-YEVILGNGGATAFWDAATFGLI- 81 (361)
T ss_pred CCCcCCCHHHHHHHHhcCc-cc---cc-cCcCChHHHHHHHHHHHHHHHHhCCCCC-ceEEEECCchhHHHHHHHHhcc-
Confidence 3455568888888643210 01 10 1123445678999999999999999643 379886 669999999999984
Q ss_pred CCCCeEEEecccccchHH-HHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceE
Q 010538 126 SHQSSYMYTMENHNSVLG-IREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNL 204 (508)
Q Consensus 126 ~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~l 204 (508)
. ++.+++...+|.+-.. +.+.....+ ++..++.++...+ + . ..+++|++
T Consensus 82 ~-~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~--------------------~--~------~~~~~~~l 131 (361)
T TIGR01366 82 E-KKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAP--------------------E--P------QADPGVDV 131 (361)
T ss_pred c-ccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCC--------------------C--C------ccCCCCCE
Confidence 3 2444555566654322 222221233 6677766532222 2 1 12578999
Q ss_pred EEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcce
Q 010538 205 FAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLG 284 (508)
Q Consensus 205 v~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G 284 (508)
|+++|++|.||.++|+++| +|+ +|++++||++|++|+.++|+.+ +|++++|+||++|+|+|++
T Consensus 132 V~~~h~et~tG~~~pi~~I---~~~------------~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~ 194 (361)
T TIGR01366 132 IAWAHNETSTGVAVPVRRP---EGS------------DDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLW 194 (361)
T ss_pred EEEcccCCccceecccccc---ccc------------CCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceE
Confidence 9999999999999999988 465 8999999999999999999996 9999999999999777899
Q ss_pred EEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc-ChHHHHHHHHHHHH
Q 010538 285 ALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL-TVPAICRHIASLGM 363 (508)
Q Consensus 285 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~~~l~~ 363 (508)
++++++++++++.+...++...... .++.............+|+++..++++.++++++.+. |++.+.+++.++++
T Consensus 195 ~~~~s~~~~~~~~~~~~~~~~~p~~---~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 195 LAIMSPAALERIEAIAASGRWVPEF---LSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS 271 (361)
T ss_pred EEEECHHHHhhhhcccCCCCCCchh---hhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999999998888766554322211 1111111111122345677788888999999999988 69999999999999
Q ss_pred HHHHHHhcccCCCCCceEEEecCCC-CCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhh
Q 010538 364 YVRKVLLSLRHENGADVCTIYGTYT-SEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKY 442 (508)
Q Consensus 364 ~l~~~L~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~ 442 (508)
++++.+.++. .++++.... .+ ....+.++| ++ + ++..++.+.|.++||.+..+...
T Consensus 272 ~l~~~l~~~~------~~~~~~~~~~~~---s~~v~~v~~--~~--g--~~~~~v~~~L~~~gI~i~~~~~~-------- 328 (361)
T TIGR01366 272 RLYSWAQERP------YATPFVTDPGKR---SQVVGTIDF--VD--D--IDAATVAKILRANGIVDTEPYRK-------- 328 (361)
T ss_pred HHHHHHHhCC------CcccCCCChhhc---ccceEEEEC--CC--c--cCHHHHHHHHHHCCCeeccCccc--------
Confidence 9999999983 456654321 11 011233443 22 1 45567889999999998654210
Q ss_pred cCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 443 LGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 443 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
...+.+|||++.|||.+||++++++|++.++.
T Consensus 329 ---------------------------l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 329 ---------------------------LGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ---------------------------cCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 12468999999999999999999999987653
No 34
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-30 Score=262.45 Aligned_cols=356 Identities=14% Similarity=0.102 Sum_probs=281.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCC
Q 010538 46 HAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPW 125 (508)
Q Consensus 46 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~ 125 (508)
..+.++.++.+..++.+... . ..+..+..++.++.+.+...++.+.. +.+++++++|.|+..++.++ .
T Consensus 10 ~PGP~~v~~~V~~am~~~~~---------~-h~s~~F~~~~~~~~~~L~~v~~t~~~-~~~ll~gsGt~amEAav~sl-~ 77 (383)
T COG0075 10 TPGPVPVPPRVLLAMARPMV---------G-HRSPDFVGIMKEVLEKLRKVFGTENG-DVVLLSGSGTLAMEAAVASL-V 77 (383)
T ss_pred eCCCCCCCHHHHHHhcCCCC---------C-CCCHHHHHHHHHHHHHHHHHhcCCCC-cEEEEcCCcHHHHHHHHHhc-c
Confidence 35566679999888755321 1 23455788899999999999999842 16778899999999999999 6
Q ss_pred CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEE
Q 010538 126 SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLF 205 (508)
Q Consensus 126 ~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv 205 (508)
++|++||+....-.+ ..|.+.+++.|.+++.+..++...+ ++++++ ++|++ ++..++|
T Consensus 78 ~pgdkVLv~~nG~FG-~R~~~ia~~~g~~v~~~~~~wg~~v---------------~p~~v~--~~L~~----~~~~~~V 135 (383)
T COG0075 78 EPGDKVLVVVNGKFG-ERFAEIAERYGAEVVVLEVEWGEAV---------------DPEEVE--EALDK----DPDIKAV 135 (383)
T ss_pred CCCCeEEEEeCChHH-HHHHHHHHHhCCceEEEeCCCCCCC---------------CHHHHH--HHHhc----CCCccEE
Confidence 778877766532222 3578889999999999998876555 689999 88863 4778999
Q ss_pred EEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceE
Q 010538 206 AFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGA 285 (508)
Q Consensus 206 ~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~ 285 (508)
+++|+.++||.+.|+++|++++++ ||+++|||++.++|..++++.+|++|+++++.+|.+++|+|+|+
T Consensus 136 ~~vH~ETSTGvlnpl~~I~~~~k~------------~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~ 203 (383)
T COG0075 136 AVVHNETSTGVLNPLKEIAKAAKE------------HGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAF 203 (383)
T ss_pred EEEeccCcccccCcHHHHHHHHHH------------cCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccce
Confidence 999999999999999999999998 99999999999999999999999999999999998888999999
Q ss_pred EEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 010538 286 LIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYV 365 (508)
Q Consensus 286 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l 365 (508)
+.++++..+.+...-.. ++..+...|..+... .+....||++..++++..|++.+.+.|++++.+|++++++++
T Consensus 204 v~~S~~a~e~~~~~~~~----~~ylDL~~~~~~~~~--~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~ 277 (383)
T COG0075 204 VAVSERALEAIEERKHP----SFYLDLKKWLKYMEK--KGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEAL 277 (383)
T ss_pred eEECHHHHHHHhcCCCC----ceeecHHHHHHHHhh--cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999998877644222 122232333322211 156778999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHH-HHHhhCCCeeccCCCCCchHHHhhcC
Q 010538 366 RKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVE-KLASLSGIQLRTGCFCNPGACAKYLG 444 (508)
Q Consensus 366 ~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~-~~L~~~gI~v~~g~~~~~~~~~~~~~ 444 (508)
++.++++ |++++.++.. +...++++.++..- +..++. ..++++|+.+..|..
T Consensus 278 r~~~~al-------Gl~~~~~~~~-----~s~tvta~~~P~g~----~~~~~~~~~~~~~g~~i~gg~~----------- 330 (383)
T COG0075 278 RAGLEAL-------GLELFADPER-----RSPTVTAIKVPEGV----DDKKVRRALLKEYGVEIAGGQG----------- 330 (383)
T ss_pred HHHHHHc-------CCccccCccc-----CCCceEEEECCCCC----CcHHHHHHHHHhCCEEeccccc-----------
Confidence 9999998 7999884432 33567777776532 212233 455667999988742
Q ss_pred CChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 445 LSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 445 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
...+.++||+...+-+.+++..++.++.+.++.+..
T Consensus 331 ------------------------~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 331 ------------------------PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred ------------------------ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 224678999988899999999999999998877654
No 35
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-31 Score=250.26 Aligned_cols=379 Identities=16% Similarity=0.127 Sum_probs=290.9
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCC--CccchhhhhhHHHHHHHHHHHHHcCCCCC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPH--SQSDISLATCDIVRAAREQVLDYFNASMK 102 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~~~~~~ 102 (508)
.+..+|+ .|... ++.||||.++.+..|+.+..+.++...++ |+.-. +.......+.++-+.+-.++|-++|+.+.
T Consensus 18 pl~~lr~-~f~lp-~~viyLdgnSLGa~p~~~~a~~~q~a~de-W~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~ 94 (407)
T COG3844 18 PLAKLRD-RFALP-GGVIYLDGNSLGARPRAVTARLQQVATDE-WGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAG 94 (407)
T ss_pred chhhhHh-hccCC-CCeEEeeccccccCchHHHHHHHHHHHHH-HHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCC
Confidence 5678998 99887 89999999999998877766665544433 22211 22212234567888899999999999999
Q ss_pred CceEEEcCChHHHHHHH-HhhcCCCCCCeEEEe-cccccchHHHHHH-HHhcCCeEEEEccCCccCcccccccccccccc
Q 010538 103 DYKCIFTSGATAALKLV-GEAFPWSHQSSYMYT-MENHNSVLGIREY-ALSQGAAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 103 ~~~i~~t~g~t~al~~~-~~~l~~~~g~~vl~~-~~~h~s~~~~~~~-~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
+++++.+++..++-+ ..++..+.|..||++ ..++|+-..+.+- +.-.| +..+-.+.+
T Consensus 95 --Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~-----~~~~~~~~~------------- 154 (407)
T COG3844 95 --EVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLG-----IGYDLEGVI------------- 154 (407)
T ss_pred --ceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhc-----ccccceeee-------------
Confidence 899999988777654 455555556666666 5667775554432 22122 112212222
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP 259 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~ 259 (508)
.|.+++ ++ .++++.+|++++++..||..+|+.+|..++|+ +|+++++|-+|+.|..|+
T Consensus 155 --~P~~~~--~~------~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~------------~galv~wDLAHsaGavp~ 212 (407)
T COG3844 155 --APRALE--EA------ITDDVAVVLLSHVNYKTGQLLDMRAITALAHQ------------HGALVGWDLAHSAGAVPV 212 (407)
T ss_pred --ChHHHH--Hh------hccceEEEEeccccccccceeeHHHHHHHHHh------------cCceEEeehhcccCCcce
Confidence 366777 33 47889999999999999999999999999998 999999999999999999
Q ss_pred CCCCCCCcEEEEeccccc-cCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHH
Q 010538 260 DLSKYPVDFVVMSFYKIF-GYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIAS 338 (508)
Q Consensus 260 d~~~~~~D~~~~S~~K~~-g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~ 338 (508)
++...++||.+.++||.+ |||++.+++|+.++..+...|...||.....-+ .+.-....-+...+|..||+++.++++
T Consensus 213 ~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf-~m~~~y~p~~ga~rf~~gt~~V~s~aa 291 (407)
T COG3844 213 DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPF-AMEEVYAPGPGARRFLCGTQPVLSLAA 291 (407)
T ss_pred eecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcc-hhhhccCcCccccceeeCCcchhhhHH
Confidence 999999999999999954 468779999999999888778877774311100 000001123467889999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHH
Q 010538 339 IRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVE 418 (508)
Q Consensus 339 l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 418 (508)
+..+|+...+.++.+++++...|++++.+.++.... --++++.+|... .+|+..|++.+++. ..+.
T Consensus 292 l~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~---~~~l~l~tPr~~----~~rGsqvS~~hp~~-------~~V~ 357 (407)
T COG3844 292 LEGALDIFADVDITELRKKSLALTDYFIELVEARCE---YYGLTLVTPRAH----EERGSQVSLYHPHG-------YQVM 357 (407)
T ss_pred HhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc---cCCcEEeccchh----hhccceeeEecCcH-------HHHH
Confidence 999999999999999999999999999999987631 016888888765 57899999999864 2489
Q ss_pred HHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC-CCCCHHHHHHHHHhhhh
Q 010538 419 KLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG-YMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 419 ~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~eev~~l~~~~~~ 497 (508)
+.|.++||+... +.++.+|+.|. +|++.+||-..++.|.+
T Consensus 358 qaLi~rGVigD~---------------------------------------R~P~vlRfgftPlY~~~~DVw~AV~~L~e 398 (407)
T COG3844 358 QALIDRGVIGDF---------------------------------------REPDVLRFGFTPLYVSFVDVWDAVDALEE 398 (407)
T ss_pred HHHHHcCccccc---------------------------------------cCCCeeeecCccceechhHHHHHHHHHHH
Confidence 999999999533 24789999999 88999999999999999
Q ss_pred hhhhh
Q 010538 498 FVNFS 502 (508)
Q Consensus 498 ~~~~~ 502 (508)
.++..
T Consensus 399 vL~t~ 403 (407)
T COG3844 399 VLDTL 403 (407)
T ss_pred HHHhh
Confidence 88654
No 36
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-30 Score=265.59 Aligned_cols=345 Identities=17% Similarity=0.132 Sum_probs=242.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHhhccccCCCCC----ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc-CChHHHHH
Q 010538 43 YLDHAGATLYSELQMEAIFRDFTTNVYGNPHS----QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT-SGATAALK 117 (508)
Q Consensus 43 yld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t-~g~t~al~ 117 (508)
+|=+++.+.+|+.|++++...+. ++. +.+. ....+....++++++++.+++++|++.+ |+++++ +++|.|+.
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~-~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~-~~v~~~~gsgt~~~E 81 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELL-DWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN-YKVLFLQGGASLQFA 81 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhh-ccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCchHHHH
Confidence 34457788889999999876542 211 2221 1223344568999999999999998432 367666 67777899
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERD 196 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~ 196 (508)
.++..+ ..+|+.+++......+ ..|.+.+++.|.. ..+..+. .+..+ ..++++ ..+
T Consensus 82 a~~~nl-~~~g~~~l~i~~G~fg-~r~~~~a~~~g~~-~~~~~~~~~g~~~---------------~~~~~~-~~l---- 138 (360)
T PRK05355 82 MVPMNL-LGGGKKADYVDTGSWS-KKAIKEAKKYGEV-NVAASSEDDGFTY---------------IPPLDE-WQL---- 138 (360)
T ss_pred HHHHhc-CCCCCeEEEEECCHHH-HHHHHHHHHhCCc-eEEecccccCCCC---------------CCChhh-ccC----
Confidence 998888 4555555444322111 2457778888865 5555442 33321 222230 133
Q ss_pred CCCCCceEEEEeCCCCCCcccc-CHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccc
Q 010538 197 PAGDAYNLFAFPSECNFSGSRF-NLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYK 275 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~n~tG~~~-~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K 275 (508)
++++++|+++|+.|.||... |+++| +|++++||++|++|+.|+|+.++ |++++|+||
T Consensus 139 --~~~~~~V~~th~eTstGv~~~~i~~i------------------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK 196 (360)
T PRK05355 139 --SDDAAYVHYTSNETIDGTEFHELPDT------------------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQK 196 (360)
T ss_pred --CCCCCEEEEccCCCcceEecCccccc------------------CCCcEEEEcCccccCccCCHHHc--cEEEEeccc
Confidence 34689999999999999999 55544 48999999999999999999985 699999999
Q ss_pred cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc-ChHHH
Q 010538 276 IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL-TVPAI 354 (508)
Q Consensus 276 ~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i 354 (508)
++| |+|+|++++++++++++.|.. ++ ..++... .......+|||+..++++.++++++.+. |++.+
T Consensus 197 ~lg-P~Glg~l~~s~~~l~~~~~~~-~~--------~~~~~~~---~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i 263 (360)
T PRK05355 197 NIG-PAGLTIVIVREDLLGRALPSI-PS--------MLDYKTH---ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAM 263 (360)
T ss_pred ccc-CCceEEEEECHHHHhhcccCC-Ch--------HHHHHHH---HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHH
Confidence 998 999999999999998877641 11 1111111 0122345899999999999999999999 89999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCC
Q 010538 355 CRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFC 434 (508)
Q Consensus 355 ~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~ 434 (508)
.+|.+++++++++.|++++ .+..+.++.. +...+++|.+++. ....++.+.+.++|+.+..|..
T Consensus 264 ~~r~~~l~~~l~~~l~~~~------~~~~~~~~~~-----rs~~v~sf~~~~~----~~~~~~~~~~~~~Gi~~~~~~~- 327 (360)
T PRK05355 264 EKRNQEKAALLYDAIDSSD------FYRNPVAPED-----RSRMNVPFTLADE----ELDKKFLAEAKAAGLVGLKGHR- 327 (360)
T ss_pred HHHHHHHHHHHHHHHHhCC------CcccCCChhh-----cCCcEEEEEcCCh----HHHHHHHHHHHHCCCcccCCCC-
Confidence 9999999999999999982 2223222211 2247799998764 1112344566667877544321
Q ss_pred CchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 435 NPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 435 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..+.+|+|+++|||.+||++|++.|++++.
T Consensus 328 ------------------------------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 328 ------------------------------------SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ------------------------------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 147899999999999999999999998654
No 37
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.98 E-value=2.6e-30 Score=267.13 Aligned_cols=332 Identities=15% Similarity=0.014 Sum_probs=248.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhh
Q 010538 43 YLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEA 122 (508)
Q Consensus 43 yld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~ 122 (508)
+|++.. ++++|.+++++.+ +.....+++.. + . ......+++++++++++|+++. .+++++|+|+++..++.+
T Consensus 24 ~~~~~~-~~~~~~~~~a~~~-~~~~~~~~~~~-~-~--~~~~~~~~~~~~la~~~g~~~~--~~~~~~ggt~a~~~a~~~ 95 (371)
T PRK13520 24 ILSSMC-TEPHPIARKAHEM-FLETNLGDPGL-F-P--GTAKLEEEAVEMLGELLHLPDA--YGYITSGGTEANIQAVRA 95 (371)
T ss_pred eeeeee-cCchHHHHHHHHH-HHhcCCCCccc-C-c--cHHHHHHHHHHHHHHHhCCCCC--CeEEecCcHHHHHHHHHH
Confidence 577654 4457777777755 43333344432 2 1 2456678899999999999876 789999999999888766
Q ss_pred cC---CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCC
Q 010538 123 FP---WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAG 199 (508)
Q Consensus 123 l~---~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~ 199 (508)
+. .+++++|++++.+|+++. +.++..|++++.+|.++++.+ |+++++ +++ +
T Consensus 96 ~~~~~~~~~~~vl~~~~~h~s~~---~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~i------~ 149 (371)
T PRK13520 96 ARNLAKAEKPNIVVPESAHFSFD---KAADMLGVELRRAPLDDDYRV---------------DVKAVE--DLI------D 149 (371)
T ss_pred HHhhccCCCceEEecCcchHHHH---HHHHHcCceEEEecCCCCCcC---------------CHHHHH--HHH------h
Confidence 52 235789999998888754 444556999999998766555 688888 555 3
Q ss_pred CCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC-------CCCCCCCCcEEEEe
Q 010538 200 DAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP-------PDLSKYPVDFVVMS 272 (508)
Q Consensus 200 ~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~-------~d~~~~~~D~~~~S 272 (508)
+++++|++++++|+||.+.|+++|.++|++ +|+++++|++|+.+..+ +++...++|++++|
T Consensus 150 ~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~------------~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s 217 (371)
T PRK13520 150 DNTIGIVGIAGTTELGQVDPIPELSKIALE------------NGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITID 217 (371)
T ss_pred hCCEEEEEEcCCcCCcccCCHHHHHHHHHH------------cCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEEC
Confidence 457778888889999999999999999998 89999999999865432 44555689999999
Q ss_pred ccccccCCCcceEEEEech-hHhhhc---cccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 273 FYKIFGYPTGLGALIMRND-AAKLLK---NTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 273 ~~K~~g~P~G~G~l~~~~~-~~~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
+|||.++|.++|+++++++ .++.+. |.+.+. .+....||++...++++.++++.+.+
T Consensus 218 ~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~-------------------~~~~~~gt~~~~~~~~~~~al~~l~~ 278 (371)
T PRK13520 218 PHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSK-------------------KQATLTGTRSGAGVAATYAVMKYLGR 278 (371)
T ss_pred CccccCccCCceEEEEcCHHHHHhhcccCccccCC-------------------CCcceEeeccChHHHHHHHHHhhhcH
Confidence 9998765767888887554 554443 111110 11123577777788899999998877
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
.|++++.++..++++++.+.|+++ +++++.++. .+++++.+++ ..++.+.|.++||.+
T Consensus 279 ~g~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~--------~~~v~~~~~~-------~~~v~~~L~~~gi~v 336 (371)
T PRK13520 279 EGYRKVVERCMENTRWLAEELKER-------GFEPVIEPV--------LNIVAFDDPN-------PDEVREKLRERGWRV 336 (371)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-------CCEEecCCC--------ceEEEEecCC-------HHHHHHHHHHCCcee
Confidence 888999999999999999999886 576433322 5788888752 235888898899998
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
+.+. ..+++|+|++.++|++||+++++.|++++
T Consensus 337 ~~~~--------------------------------------~~~~iRis~~~~~t~edi~~~~~~l~~~~ 369 (371)
T PRK13520 337 SVTR--------------------------------------CPEALRIVCMPHVTREHIENFLEDLKEVK 369 (371)
T ss_pred ccCC--------------------------------------CCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 7631 14679999999999999999999998765
No 38
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.98 E-value=8.6e-30 Score=264.89 Aligned_cols=354 Identities=13% Similarity=0.040 Sum_probs=252.5
Q ss_pred CCCeeeeC-CCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHH
Q 010538 39 NGTVYLDH-AGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAAL 116 (508)
Q Consensus 39 ~~~iyld~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al 116 (508)
+..|.||- ...+|+++.+++++.+.. ..+++|.+ .+..+.......+++++.+|+++|++ .+++++|+|+|+
T Consensus 18 ~~~~~~~~~~~~~p~~~~~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~----~~~~~~g~t~a~ 91 (387)
T PRK09331 18 EEFINLDPIQRGGILTPEARKALIEYG--DGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD----EARVTHGAREGK 91 (387)
T ss_pred ccccccChhhcCCCCCHHHHHHHHHHH--hccCCCcccccccccccChHHHHHHHHHHHHhCCC----cEEEeCCHHHHH
Confidence 44455554 347888999988876643 34456644 33334444567899999999999995 367899999999
Q ss_pred HHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc--CCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 117 KLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV--EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 117 ~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~--~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
.+++.++ .++|++|+++..+|++.... ++..|++++.+|. +..+.+ |+++++ +++++
T Consensus 92 ~~al~~l-~~~gd~Vlv~~~~h~s~~~~---~~~~G~~~~~v~~~~~~~~~~---------------d~~~l~--~~l~~ 150 (387)
T PRK09331 92 FAVMHSL-CKKGDYVVLDGLAHYTSYVA---AERAGLNVREVPKTGYPEYKI---------------TPEAYA--EKIEE 150 (387)
T ss_pred HHHHHHh-cCCCCEEEECCCchHHHHHH---HHHcCCEEEEEeCccCcCCCc---------------CHHHHH--HHHHH
Confidence 9999998 68899999999999887654 4557999999998 444444 678887 66532
Q ss_pred C-CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEec
Q 010538 195 R-DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSF 273 (508)
Q Consensus 195 ~-~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~ 273 (508)
. ....+++++|++++++|+||.+.|+++|.++|++ +|+++++|++|+.|..|++...+++|++++|+
T Consensus 151 ~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~------------~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~ 218 (387)
T PRK09331 151 VKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHE------------YGIPFLLNGAYTVGRMPVDGKKLGADFIVGSG 218 (387)
T ss_pred hhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHH------------cCCEEEEECCcccCCcCCCHHHcCCCEEEeeC
Confidence 1 0112578999999999999999999999999998 89999999999999999999999999999999
Q ss_pred cccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHH
Q 010538 274 YKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPA 353 (508)
Q Consensus 274 ~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 353 (508)
||++++|.|+|++++++++++.+.....+... . ...+..++......+++.++++.+.+. . .
T Consensus 219 ~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~aal~~~~~~-~-~ 280 (387)
T PRK09331 219 HKSMAASAPSGVLATTEEYADKVFRTSRKFGV---------------K-EVELLGCTLRGAPLVTLMASFPHVVER-V-K 280 (387)
T ss_pred cccccCCCCEEEEEECHHHHhhcccccCCCcc---------------c-ceeeeceecCchHHHHHHHHHHHHHHH-H-H
Confidence 99998788899999999887765443111000 0 000112233334455555666654432 2 3
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC----CCCccCHHHHHHHHhhCCCeec
Q 010538 354 ICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP----DGSWFGYREVEKLASLSGIQLR 429 (508)
Q Consensus 354 i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~l~~~L~~~gI~v~ 429 (508)
..++..++++++++.|+++ +|++++.+... ..+++.+..+.. .........+.+.|.++||..-
T Consensus 281 ~~~~~~~~~~~l~~~L~~l------~g~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~ 348 (387)
T PRK09331 281 RWDEEVKKARWFVDELEKI------EGFKQLGEKPR------NHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGI 348 (387)
T ss_pred HHHHHHHHHHHHHHHHhcC------CCEEEeccCcC------cCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEE
Confidence 4566678889999999998 47998864221 267777775532 1111122347888989999832
Q ss_pred -cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 430 -TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 430 -~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.| ....+|++. ..+|.+|+++++++|+++.+.
T Consensus 349 ~~~---------------------------------------~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 349 KPG---------------------------------------ATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred ccC---------------------------------------CceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 11 134455555 448999999999999988654
No 39
>PLN03032 serine decarboxylase; Provisional
Probab=99.97 E-value=4.3e-30 Score=262.92 Aligned_cols=336 Identities=14% Similarity=0.055 Sum_probs=261.7
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
....|+.|.......+.+++++.. +..+.++||.+.+..+..+.++.+++++++++++|++++++..+||+|+|+|+++
T Consensus 22 ~~~~~~gy~~~~~~~~~~~~~~~~-~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~ 100 (374)
T PLN03032 22 KSSVHFGYPYNLDFDYGELSQLMK-YSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLH 100 (374)
T ss_pred hhhhccCCCchhccChHHHHHHHH-hcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHH
Confidence 456788888877778788888766 5556689999887778888999999999999999999872224999999999998
Q ss_pred HHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 119 VGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 119 ~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
++.+.. ..++.+|+++..+|+|+....+.+ |.+++.||++.++.+ |+++++ ++|+++
T Consensus 101 al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l---g~~~~~V~~d~~g~i---------------d~~~L~--~~i~~~-- 158 (374)
T PLN03032 101 GILVGREVFPDGILYASRESHYSVFKAARMY---RMEAVKVPTLPSGEI---------------DYDDLE--RALAKN-- 158 (374)
T ss_pred HHHHHHHhCCCcEEEeCCCceeHHHHHHHHc---CCCCeEeeeCCCCcC---------------cHHHHH--HHHHHc--
Confidence 776542 123468999999999998776654 778889999888887 688998 777432
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC-----eEEEEeccccCCCCCC-------CCCCCC
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR-----WMVLIDAAKGCVTQPP-------DLSKYP 265 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g-----~~vivD~a~~~g~~~~-------d~~~~~ 265 (508)
..+|.+|++++++|++|.+.|+++|.++|++ +| ++++||++++.+..|+ ++. .+
T Consensus 159 -~~~~~lvv~tagtt~tG~idpi~eI~~i~~~------------~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~ 224 (374)
T PLN03032 159 -RDKPAILNVNIGTTVKGAVDDLDRILRILKE------------LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KP 224 (374)
T ss_pred -CCCCEEEEEEecCcCCccCCCHHHHHHHHHH------------hCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cC
Confidence 2367899999999999999999999999997 64 6999999999988875 554 36
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhcc--ccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKN--TYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
+|.+++|+||+++.|.|+|+++++++.++.+.. .+... ......|+.+....+.++.++
T Consensus 225 vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~-------------------~d~ti~gSR~g~~~l~~w~~l 285 (374)
T PLN03032 225 IGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNS-------------------RDATIMGSRNGHAPLYLWYTL 285 (374)
T ss_pred CcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCC-------------------CCCcccCCCchHHHHHHHHHH
Confidence 999999999988889999999999877654421 11110 111234677766778888899
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhh
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASL 423 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~ 423 (508)
+.+...|+.++.+++.++++++.+.|++. +++++..+. .++|.|+-+..+ .+.
T Consensus 286 ~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-------~~~~~~~p~--------~~~V~f~~~~~~-----------~~~- 338 (374)
T PLN03032 286 RRKGYRGIKRDVQHCMRNAHYLKDRLTEA-------GLTCRLNEL--------SSTVVFERPMDE-----------AFI- 338 (374)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcEEECCC--------ceEEEEcCCCcH-----------hHh-
Confidence 98888899999999999999999999886 566665543 677877765311 122
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
+|..+.+ ..+.+|+.+....|.+.+|.|++-|++
T Consensus 339 ~~w~l~~----------------------------------------~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 KKWQLAC----------------------------------------EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred heeeecc----------------------------------------cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 4555442 135899999999999999999887764
No 40
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=1.6e-29 Score=261.50 Aligned_cols=333 Identities=16% Similarity=0.018 Sum_probs=240.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhh
Q 010538 43 YLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEA 122 (508)
Q Consensus 43 yld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~ 122 (508)
+|++....+ .+.+.+++.. +.....+++. .+ .+ .....+++++++|+++|++++ ++++++|+++++..++.+
T Consensus 24 ~~~~~~~~~-~~~~~~a~~~-~~~~~~~~~~-~~-~~--~~~~~~~~~~~la~~~g~~~~--~~~~~~g~~~~~~~~~~~ 95 (373)
T TIGR03812 24 ILGSMCTNP-HPIAVKAYDM-FIETNLGDPG-LF-PG--TKKIEEEVVGSLGNLLHLPDA--YGYIVSGGTEANIQAVRA 95 (373)
T ss_pred EEEEEeCCc-hHHHHHHHHH-HhhcCCCCcc-cC-cc--HHHHHHHHHHHHHHHhCCCCC--CeEEeccHHHHHHHHHHH
Confidence 566665553 5556666544 4333344443 12 22 346678899999999999877 788899999998877665
Q ss_pred cCC-----CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 123 FPW-----SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 123 l~~-----~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+.. .+|++|+++..+|+++. ..++..|++++.++.+.++.+ |+++++ +++
T Consensus 96 ~~~~~~~~~~g~~vl~~~~~h~~~~---~~~~~~G~~~~~v~~~~~~~~---------------d~~~l~--~~l----- 150 (373)
T TIGR03812 96 AKNLAREEKRTPNIIVPESAHFSFE---KAAEMLGLELRYAPLDEDYTV---------------DVKDVE--DLI----- 150 (373)
T ss_pred HHHHHhccCCCcEEEECCcchHHHH---HHHHHcCCeEEEEeeCCCCCc---------------CHHHHH--HHH-----
Confidence 421 35689999998887754 345567999999998765555 578888 555
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC----------CCCCCCCCCc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ----------PPDLSKYPVD 267 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~----------~~d~~~~~~D 267 (508)
.+++..+++.+++|+||.+.|+++|.++|++ +|+++++|++|+.+.. ++|+...++|
T Consensus 151 -~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~------------~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d 217 (373)
T TIGR03812 151 -DDNTIGIVGIAGTTELGQIDDIEELSKIALE------------NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQ 217 (373)
T ss_pred -hhCcEEEEEECCCCCCCccCCHHHHHHHHHH------------cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCC
Confidence 3344434444478999999999999999998 8999999999975432 4566656899
Q ss_pred EEEEeccccccCCCcceEEEE-echhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIM-RNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLI 346 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 346 (508)
++++|+|||..+|.++|++++ +++.++.+... ..+.. ........||++...++++.++++++
T Consensus 218 ~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~-~~~~~---------------~~~~~~~~gt~~~~~~~~~~~~l~~l 281 (373)
T TIGR03812 218 SITIDPHKMGLSPIPAGGILFRSKSYLKYLSVD-APYLT---------------VKKQATITGTRSGASAAATYAVIKYL 281 (373)
T ss_pred EEEECccccCCCcCCceEEEEeCHHHHhhhccc-CcccC---------------CCCCcceEeechhHHHHHHHHHHHHh
Confidence 999999997554767776664 56665554311 00000 00111234788888899999999998
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCC
Q 010538 347 NSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGI 426 (508)
Q Consensus 347 ~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI 426 (508)
.+.|++++.+++.+++++|++.|+++ ++..+.++. .++++|.+++. ..+.+.|.++||
T Consensus 282 ~~~g~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~--------~~~v~~~~~~~-------~~v~~~L~~~gi 339 (373)
T TIGR03812 282 GREGYRKIVAECMENTRYLVEELKKI-------GFEPVIEPV--------LNIVAFEVDDP-------EEVRKKLRDRGW 339 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCeEEcCCC--------ceEEEEEeCCH-------HHHHHHHHHCCc
Confidence 88889999999999999999999987 343332222 68888887642 248888999999
Q ss_pred eeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 427 QLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 427 ~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.++.+. .++++|+|++.++|.+|++++++.|++
T Consensus 340 ~v~~~~--------------------------------------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 340 YVSVTR--------------------------------------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred eeccCC--------------------------------------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 987631 146899999999999999999999875
No 41
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=4.9e-29 Score=260.16 Aligned_cols=362 Identities=11% Similarity=0.022 Sum_probs=247.2
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccch--hhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDI--SLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAAL 116 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al 116 (508)
.+.++|..+..+..+|.++++...+. .. . +....+.. .....++.+++++++++++|++.+ +++++++++.+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~~-~-~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~--~v~~~~~g~~~~ 94 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-EF-Y-TAYTPYQPEISQGRLQALFELQTMLCELTGMDVA--NASLQDEATAAA 94 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-cC-c-ccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc--ceeccCchHHHH
Confidence 56689999999988888888765543 11 0 11111111 234567888999999999999876 677777666544
Q ss_pred H-HHHhhcCCCC--CCeEEEecccccchHHHHHHH-HhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCC
Q 010538 117 K-LVGEAFPWSH--QSSYMYTMENHNSVLGIREYA-LSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASF 192 (508)
Q Consensus 117 ~-~~~~~l~~~~--g~~vl~~~~~h~s~~~~~~~~-~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l 192 (508)
+ .+..++ ..+ |++|+++...|+++...+..+ +..|++++.+|.+....+ |+++++ +++
T Consensus 95 ~~~~~~~~-~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~i 156 (398)
T cd00613 95 EAAGLAAI-RAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTV---------------DLEALK--EEV 156 (398)
T ss_pred HHHHHHHH-hcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCc---------------CHHHHH--Hhc
Confidence 4 444443 444 899999999999988776655 345689999988654444 678888 544
Q ss_pred CCCCCCCCCceEEEEeCCCCCCccccCH-HHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEE
Q 010538 193 PERDPAGDAYNLFAFPSECNFSGSRFNL-DLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVM 271 (508)
Q Consensus 193 ~~~~~~~~~t~lv~~~~~~n~tG~~~~i-~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~ 271 (508)
+++|++|++++++ ++|.+.|. ++|.++|++ +|+++|+|++|+.+..+.+...+++|++++
T Consensus 157 ------~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~------------~g~~livD~~~~~~~~~~~~~~~~~d~~~~ 217 (398)
T cd00613 157 ------SEEVAALMVQYPN-TLGVFEDLIKEIADIAHS------------AGALVYVDGDNLNLTGLKPPGEYGADIVVG 217 (398)
T ss_pred ------CCCeEEEEEECCC-CCceecchHHHHHHHHHh------------cCCEEEEEeccccccCCCChHHcCCCEEEe
Confidence 5678999999975 89999996 999999998 999999999998777777777789999999
Q ss_pred eccccccCC-----CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh-----HHHHHHH
Q 010538 272 SFYKIFGYP-----TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL-----SIASIRH 341 (508)
Q Consensus 272 S~~K~~g~P-----~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~-----~~~~l~~ 341 (508)
|+|||++ | .|.|++++++++++.+.+...+|...........+.........+++.++.++. .......
T Consensus 218 s~~K~~~-p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~ 296 (398)
T cd00613 218 NLQKTGV-PHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAM 296 (398)
T ss_pred eccccCC-CCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHH
Confidence 9999983 5 247899999988877666554543211000000110000001223445555432 2333344
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
+++.+.+.|++++.+++.++++++++.|+++. +.. .+... ..++++|+++...+ .+..++.+.|
T Consensus 297 ~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~------~~~--~~~~~------~~~~v~~~~~~~~~--~~~~~~~~~L 360 (398)
T cd00613 297 YIVYLGPEGLKEIAERAHLNANYLAKRLKEVG------GVL--PFNGP------FFHEFVLRLPPLYG--IRAEDLAKAL 360 (398)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcC------Ccc--cCCCC------eeEEEEEEcCCcch--HHHHHHHHhh
Confidence 55666666889999999999999999999873 222 12111 14566777753201 2334688888
Q ss_pred hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 422 SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 422 ~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
.++||.+.... + ...+.+|+|++.|||.||||++++.|
T Consensus 361 ~~~gi~~~~~~----~--------------------------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 361 IDGGFHAPTMY----L--------------------------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred hhcCccccccc----c--------------------------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 88999754311 0 01578999999999999999998764
No 42
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=1.6e-29 Score=258.60 Aligned_cols=293 Identities=17% Similarity=0.060 Sum_probs=222.8
Q ss_pred cchhhhhhHHHHHHHHHHHHHcCCC--CCCceEEEcCChHHHHHHHHhhcCCC-----------C--CCeEEEecccccc
Q 010538 76 SDISLATCDIVRAAREQVLDYFNAS--MKDYKCIFTSGATAALKLVGEAFPWS-----------H--QSSYMYTMENHNS 140 (508)
Q Consensus 76 ~~~~~~~~~~~~~~r~~la~~~~~~--~~~~~i~~t~g~t~al~~~~~~l~~~-----------~--g~~vl~~~~~h~s 140 (508)
|..+....++.+++++++++++|++ ++ +++||+|+|+|+.+++.++..+ + +.+|+++...|++
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~ 107 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS 107 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH
Confidence 4455556778888999999999996 33 7999999999999988876321 2 3478888989988
Q ss_pred hHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCH
Q 010538 141 VLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNL 220 (508)
Q Consensus 141 ~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i 220 (508)
+...... .|.+++.+|.+.++.+ |+++++ +++.+......++++|++++++|+||.+.|+
T Consensus 108 ~~~~~~~---~g~~~~~v~~~~~~~~---------------d~~~l~--~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~ 167 (345)
T cd06450 108 VEKAAAY---LDVKVRLVPVDEDGRM---------------DPEALE--AAIDEDKAEGLNPIMVVATAGTTDTGAIDPL 167 (345)
T ss_pred HHHHHHH---HhcCeEEeeeCCCCCc---------------CHHHHH--HHHHHHHHCCCCcEEEEEecccCCCCCCCCH
Confidence 7655544 3899999998765555 678888 5553211112367899999999999999999
Q ss_pred HHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCC------CCCcEEEEeccccccCCCcceEEEEechhHh
Q 010538 221 DLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSK------YPVDFVVMSFYKIFGYPTGLGALIMRNDAAK 294 (508)
Q Consensus 221 ~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~------~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~ 294 (508)
++|.++|++ +|+++++|++|+.+..+.+... .++|++++|+||++++|.|+|+++++
T Consensus 168 ~~i~~~~~~------------~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----- 230 (345)
T cd06450 168 EEIADLAEK------------YDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----- 230 (345)
T ss_pred HHHHHHHHH------------hCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----
Confidence 999999998 8999999999998876654322 37899999999988768888887655
Q ss_pred hhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccC
Q 010538 295 LLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRH 374 (508)
Q Consensus 295 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~ 374 (508)
.+++.++++++...|++++.++..++++++.+.|++++
T Consensus 231 -----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~- 268 (345)
T cd06450 231 -----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADP- 268 (345)
T ss_pred -----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 23445567777777899999999999999999999873
Q ss_pred CCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhh
Q 010538 375 ENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNI 454 (508)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~ 454 (508)
+++++.++. .++++|.++......++..++.+.|.++|+.+.++..+.
T Consensus 269 -----~~~~~~~~~--------~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~------------------- 316 (345)
T cd06450 269 -----GFELLGEPN--------LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLG------------------- 316 (345)
T ss_pred -----CeEEecCCc--------eeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEEC-------------------
Confidence 688776543 689999986421011233468888988876655432110
Q ss_pred hcCCccCCCccccCCCCCceEEEecCCC-CCHHHHHHHHHhhhh
Q 010538 455 EAGHVCWDDNDIIHGKPTGAIRVSFGYM-STFEDAKVNRCSSFD 497 (508)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~iRis~~~~-~t~eev~~l~~~~~~ 497 (508)
.++++|+|++.+ +|.+|++++++.|++
T Consensus 317 ----------------~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 317 ----------------GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ----------------CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 257899999987 599999999998865
No 43
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=1.4e-27 Score=246.08 Aligned_cols=344 Identities=13% Similarity=0.023 Sum_probs=243.6
Q ss_pred CCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCC
Q 010538 48 GATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWS 126 (508)
Q Consensus 48 ~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~ 126 (508)
..+++.+.+++++.+ +. ..+++|.. ....+........++++.+|+++|+ + ++++|+|+|+++.+++.++ .+
T Consensus 9 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~--~i~~~~g~t~al~~~l~~~-~~ 81 (361)
T cd06452 9 RGGRLTPEARKALIE-WG-DGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--D--EARVTPGAREGKFAVMHSL-CE 81 (361)
T ss_pred cCCCCCHHHHHHHHH-Hh-cccCCccccccccccccCchHHHHHHHHHHHcCC--c--eEEEeCCHHHHHHHHHHHh-cC
Confidence 356778888887754 43 33455543 2222322345688899999999999 4 7999999999999999998 67
Q ss_pred CCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc--CccccccccccccccccchhhhhcCCCCCCCC-CCCCCce
Q 010538 127 HQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV--DNDGLSESLVTSTKISLLPIQRRKGASFPERD-PAGDAYN 203 (508)
Q Consensus 127 ~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~--~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~-~~~~~t~ 203 (508)
+|++|+++...|.+... .++..|++++.+|.+.++ .+ |+++++ +++++.. ...++++
T Consensus 82 ~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~---------------d~~~l~--~~l~~~~~~~~~~~~ 141 (361)
T cd06452 82 KGDWVVVDGLAHYTSYV---AAERAGLNVREVPNTGHPEYHI---------------TPEGYA--EVIEEVKDEFGKPPA 141 (361)
T ss_pred CCCEEEEcCCcchHHHH---HHHhcCCEEEEEecCCCCCccc---------------CHHHHH--HHHHHHhhccCCCce
Confidence 89999999887877653 355679999999987543 44 677887 5553210 0014789
Q ss_pred EEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcc
Q 010538 204 LFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGL 283 (508)
Q Consensus 204 lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~ 283 (508)
+|++++++|+||...|+++|.++|++ +|+++++|++|+.|..+++..++++|++++|+||++++|.++
T Consensus 142 lv~l~~p~n~tG~~~~~~~i~~~~~~------------~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~ 209 (361)
T cd06452 142 LALLTHVDGNYGNLHDAKKIAKVCHE------------YGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPI 209 (361)
T ss_pred EEEEECCCCCCeeeccHHHHHHHHHH------------cCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCe
Confidence 99999999999999999999999998 899999999999999888888889999999999988867779
Q ss_pred eEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 010538 284 GALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGM 363 (508)
Q Consensus 284 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 363 (508)
|++++++++++++......+.. . .-....++.....++++.++++.+.+. ++. .++..+.++
T Consensus 210 G~l~~~~~~~~~l~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~-~~~~~~~~~ 271 (361)
T cd06452 210 GVLATTEEWADIVFRTSQMFKI-K---------------EVELLGCTLRGAPLVTLMASFPHVKER-VKR-WDEEVEKAR 271 (361)
T ss_pred EEEEECHHHHHHHhcccccccc-c---------------eeeeeccccCchHHHHHHHHHHHHHHH-HHH-HHHHHHHHH
Confidence 9999999888776543211110 0 011223455555566666677654332 333 344455668
Q ss_pred HHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC----CccCHHHHHHHHhhCCCeeccCCCCCchHH
Q 010538 364 YVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG----SWFGYREVEKLASLSGIQLRTGCFCNPGAC 439 (508)
Q Consensus 364 ~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~ 439 (508)
++.+.|+++ ++++++.+... ..+++.++.+.... .......+.+.|.++||.+.. .+
T Consensus 272 ~l~~~L~~l------~g~~v~~~~~~------~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~-----~~-- 332 (361)
T cd06452 272 WFVAELEKI------EGIKQLGEKPK------NHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIK-----PG-- 332 (361)
T ss_pred HHHHHHhcC------CCeEEECCCCC------CCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEc-----CC--
Confidence 999999988 47888754321 26788887652100 000112478889889998421 00
Q ss_pred HhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 440 AKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 440 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
..+++|++... .|.+|++.++++|+++.
T Consensus 333 -------------------------------~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 333 -------------------------------LTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -------------------------------CceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 14589999933 59999999999998754
No 44
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=8.9e-28 Score=250.30 Aligned_cols=329 Identities=15% Similarity=0.092 Sum_probs=232.0
Q ss_pred CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeE
Q 010538 52 YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSY 131 (508)
Q Consensus 52 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~v 131 (508)
.+|.+++++.+.+....++++.+.+..| ......++++.+|+++|.+ ++++++|+++|++.++.++ +++||+|
T Consensus 53 ~~~~v~~~~~~~~~~~~~~~~~s~~~~G--~~~~~~~le~~ia~~~g~~----~~ii~~~~~~a~~~~~~~l-~~~gd~v 125 (393)
T TIGR01822 53 SHPDLIQAAKDALDEHGFGMSSVRFICG--TQDIHKELEAKIAAFLGTE----DTILYASCFDANGGLFETL-LGAEDAI 125 (393)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccC--ChHHHHHHHHHHHHHhCCC----cEEEECchHHHHHHHHHHh-CCCCCEE
Confidence 3778888877655432245555543333 2566788999999999985 3455578889999999998 7899999
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSEC 211 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~ 211 (508)
+++..+|+++...++.+ +.+...++. + |+++++ +++++......+|++|++++++
T Consensus 126 i~~~~~~~s~~~~~~~~---~~~~~~~~~-----~---------------d~~~l~--~~i~~~~~~~~~~~~v~~~~v~ 180 (393)
T TIGR01822 126 ISDALNHASIIDGVRLC---KAKRYRYAN-----N---------------DMADLE--AQLKEARAAGARHRLIATDGVF 180 (393)
T ss_pred EEeccccHHHHHHHHhc---CCceEEeCC-----C---------------CHHHHH--HHHHhhhhcCCCceEEEEeCCc
Confidence 99999999987766543 444433321 2 455666 5543211112378999999999
Q ss_pred CCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC---------CCCCCCCcEEEEeccccccCCCc
Q 010538 212 NFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP---------DLSKYPVDFVVMSFYKIFGYPTG 282 (508)
Q Consensus 212 n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~---------d~~~~~~D~~~~S~~K~~g~P~G 282 (508)
|+||.+.|+++|.++|++ +|+++++|++|+.|.... ++. .++|++++|+||+++++.
T Consensus 181 ~~tG~~~~l~~i~~la~~------------~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r- 246 (393)
T TIGR01822 181 SMDGVIAPLDEICDLADK------------YDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGAS- 246 (393)
T ss_pred cCCCCcCCHHHHHHHHHH------------cCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCC-
Confidence 999999999999999998 999999999998776432 222 258999999999988665
Q ss_pred ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 010538 283 LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLG 362 (508)
Q Consensus 283 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 362 (508)
.|+++++++.++.+.+... .. ...++.+...++++.++++.+. ..+++++++.+++
T Consensus 247 ~G~~~~~~~~~~~l~~~~~---------------------~~-~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~ 302 (393)
T TIGR01822 247 GGFTTARKEVVELLRQRSR---------------------PY-LFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANT 302 (393)
T ss_pred cEEEEeCHHHHHHHHHhCc---------------------cc-eecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Confidence 5999999888876654210 00 1124455555666677887764 3678889999999
Q ss_pred HHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhh
Q 010538 363 MYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKY 442 (508)
Q Consensus 363 ~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~ 442 (508)
+++.+.|++. ++++..+. ++++.+.+.+. .+..++.+.|.++||.+. +..+...
T Consensus 303 ~~l~~~L~~~-------g~~~~~~~---------~~~~~i~~~~~----~~~~~l~~~L~~~gI~v~-~~~~~~~----- 356 (393)
T TIGR01822 303 RYFRERMEAA-------GFDIKPAD---------HPIIPVMLYDA----VLAQRFARRLLEEGIYVT-GFFYPVV----- 356 (393)
T ss_pred HHHHHHHHHc-------CCCCCCCC---------CCEEEEEeCCH----HHHHHHHHHHHHCCeeEe-eeCCCCC-----
Confidence 9999999875 46554321 45666665431 122457888888899987 3322110
Q ss_pred cCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 443 LGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 443 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
......+|+|+++++|.+|++++++.|.++.+.+
T Consensus 357 --------------------------~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 357 --------------------------PKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred --------------------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 0013569999999999999999999999876543
No 45
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=3.3e-27 Score=250.22 Aligned_cols=323 Identities=14% Similarity=0.078 Sum_probs=231.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHH-HHhcCCeEEEEcc
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREY-ALSQGAAAFAIDV 160 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~-~~~~G~~v~~v~~ 160 (508)
..+...+.++++++++|++++ ++++|+|+|+++..++.++...+|++|+++..+|+++...++. +...|++++.+|.
T Consensus 110 ~~~~~~e~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 110 TLQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC
Confidence 455566677889999999988 8999999999999998887556789999999999998877664 4557999999998
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+.+ .+ |+++++ +++ +++|++|+++++ |+||.+.|+++|.++||+
T Consensus 188 ~~~-~~---------------d~~~l~--~~i------~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~----------- 231 (447)
T PRK00451 188 EDG-VT---------------DLEALE--AAV------DDDTAAVVVQYP-NFFGVIEDLEEIAEIAHA----------- 231 (447)
T ss_pred CCC-CC---------------CHHHHH--Hhc------CCCeEEEEEECC-CCCCeeCCHHHHHHHHHH-----------
Confidence 765 55 688888 554 567899999998 899999999999999998
Q ss_pred CCCeEEEE--eccccCCCCCCCCCCCCCcEEEEecccc-----ccCCCcceEEEEechhHhhhccccccCceEEecccch
Q 010538 241 KGRWMVLI--DAAKGCVTQPPDLSKYPVDFVVMSFYKI-----FGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADI 313 (508)
Q Consensus 241 ~~g~~viv--D~a~~~g~~~~d~~~~~~D~~~~S~~K~-----~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~ 313 (508)
+|+++++ |.. +.|..+ ...++++|++++|+||| ++|| |+|++++++++++.+.+.+.|+..........
T Consensus 232 -~~~~~iv~~d~~-~~g~~~-~~~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 307 (447)
T PRK00451 232 -GGALFIVGVDPV-SLGLLK-PPGEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDADGKRGF 307 (447)
T ss_pred -CCCEEEEEcChH-HhccCC-CcccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHHHhhCCCCEeeeecccCCCeee
Confidence 8999998 544 345443 23567999999999996 6657 79999999999888877766653111100000
Q ss_pred hhhhhccCccccccCCCCChhH---H--HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCC
Q 010538 314 DFVKRRQGVEELFEDGTASFLS---I--ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYT 388 (508)
Q Consensus 314 ~~~~~~~~~~~~~~~gt~~~~~---~--~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~ 388 (508)
.+.........+++.++.++.. + .+...+++++.+.|++++.+++.++++++++.|+++ ++++++ +..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~------~g~~~~-~~~ 380 (447)
T PRK00451 308 VLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI------GGVELF-DGP 380 (447)
T ss_pred EeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc------CCEEec-CCC
Confidence 0000001112344555555432 2 223334666667789999999999999999999987 368776 211
Q ss_pred CCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeecc-CCCCCchHHHhhcCCChhhhhhhhhcCCccCCCcccc
Q 010538 389 SEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRT-GCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDII 467 (508)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~-g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 467 (508)
. ..++.++++ . +..++.+.|.++||.+.. +..+.+
T Consensus 381 ~-------~~~~~v~~~-~-----~~~~~~~~L~~~gi~~~~~~~~~~~------------------------------- 416 (447)
T PRK00451 381 F-------FNEFVVRLP-K-----PAEEVNEALLEKGILGGYDLGRYYP------------------------------- 416 (447)
T ss_pred e-------EEEEEEecC-C-----CHHHHHHHHHhcCCCCCcccccccC-------------------------------
Confidence 0 223334442 1 234588899999888432 111101
Q ss_pred CCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 468 HGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 468 ~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
. ..+++|+|++.++|.+|++++++.|++++
T Consensus 417 -~-~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 417 -E-LGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -C-cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 14689999999999999999999998764
No 46
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=1.3e-26 Score=239.74 Aligned_cols=309 Identities=14% Similarity=0.023 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
....+.++.+|+++|+++. .+++|+++++..++.++ .++|+.|+++...|.+.+. .++..|++++.+|.+++
T Consensus 51 ~~~~~~~e~lA~~~g~~~~----~i~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~h~s~~~---~~~~~g~~~~~~~~~~~ 122 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEA----RVTHGAREGKFAVMHAL-CKEGDWVVLDGLAHYTSYV---AAERAGLNVKEVPHTGH 122 (370)
T ss_pred hHHHHHHHHHHHHhCCCce----EEECChHHHHHHHHHHh-hCCCCEEEECCcccHHHHH---HHHHcCCEEEEEecCCc
Confidence 3566788889999999754 56899999999999999 6889999998888877653 34567999999997642
Q ss_pred --cCccccccccccccccccchhhhhcCCCCCCCC-CCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 164 --VDNDGLSESLVTSTKISLLPIQRRKGASFPERD-PAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 164 --~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~-~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
..+ |+++++ +++.+.. ...+++++|++++++|++|.+.|+++|.++|++
T Consensus 123 ~~~~~---------------d~~~l~--~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~----------- 174 (370)
T TIGR02539 123 PEYKV---------------DPEGYG--EVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCRE----------- 174 (370)
T ss_pred ccCCc---------------CHHHHH--HHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHH-----------
Confidence 333 577777 5553210 011367899999999999999999999999998
Q ss_pred CCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 241 KGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
+|+++++|++|+.|..+++...+++|+++.|+||+++.+.++|++++++++++.+......+.. .
T Consensus 175 -~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~-~------------- 239 (370)
T TIGR02539 175 -KGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPV-K------------- 239 (370)
T ss_pred -cCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCcc-c-------------
Confidence 8999999999999987888777789999999999998444589999999998877654221110 0
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceE
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMV 400 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (508)
.-.+..++.......++.++++.+.+. ++.. .+..++++++++.|+++ ++++++.... .++++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~al~~~~~~-l~~~-~~~~~~~~~l~~~L~~~-------g~~~~~~~~s------~t~~v 302 (370)
T TIGR02539 240 --EVELLGCTSRGAPIVTMMASFPHVVER-VKRW-DEEVKKTRWFVAELEDI-------GFIQLGQKPK------EHDLV 302 (370)
T ss_pred --eeeeecccccccHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHhC-------CcEEEccCCC------cCceE
Confidence 001122333333455555566643221 3333 33344467999999987 6877643221 27899
Q ss_pred EEEeeCCCC----CccCHHHHHHHHhhCCCe-eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceE
Q 010538 401 SFNLKRPDG----SWFGYREVEKLASLSGIQ-LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAI 475 (508)
Q Consensus 401 ~~~~~~~~~----~~~~~~~l~~~L~~~gI~-v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 475 (508)
+++++.... ..-....+.+.|.++||. ++.|. ++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~---------------------------------------~~~i 343 (370)
T TIGR02539 303 KFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQ---------------------------------------TKYF 343 (370)
T ss_pred EEECCchhHHhhhhccccHHHHHHHHhCCCccccCCc---------------------------------------ceEE
Confidence 888754210 001123488899999997 55321 4689
Q ss_pred EEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 476 RVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 476 Ris~~~~~t~eev~~l~~~~~~~~~ 500 (508)
|+|++ ..|.+|+++++++|+++++
T Consensus 344 Ris~~-~~t~e~i~~l~~~L~~~~~ 367 (370)
T TIGR02539 344 KLSVY-GLTKEQVEYVVDSFEEIVE 367 (370)
T ss_pred EEEec-CCCHHHHHHHHHHHHHHHH
Confidence 99984 4599999999999988764
No 47
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.96 E-value=6.7e-27 Score=261.63 Aligned_cols=350 Identities=13% Similarity=0.086 Sum_probs=258.2
Q ss_pred hhccCC-CCCeeeeCCCCCC----CCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCce
Q 010538 33 EFKRLE-NGTVYLDHAGATL----YSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYK 105 (508)
Q Consensus 33 ~f~~~~-~~~iyld~~~~~~----~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~ 105 (508)
+|..+. .+.+|+++.+.+. +|+.+.+++.... +++ -.|... ..+....+.+.+.+..+++++|++++ +
T Consensus 93 ~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~--~~~TaytPYqa-EisQG~lqal~~~Qt~ia~LtG~~~a--n 167 (993)
T PLN02414 93 HMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENP--GWYTQYTPYQA-EIAQGRLESLLNYQTMITDLTGLPMS--N 167 (993)
T ss_pred HHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhCh--HHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHhCCChh--h
Confidence 444332 6778999999998 7777767765422 111 123221 22244567788899999999999998 8
Q ss_pred EEEcCChHHHHHHHHhhcCCCCC--CeEEEecccccchHHHH-HHHHhcCCeEEEEccCCccCccccccccccccccccc
Q 010538 106 CIFTSGATAALKLVGEAFPWSHQ--SSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLL 182 (508)
Q Consensus 106 i~~t~g~t~al~~~~~~l~~~~g--~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d 182 (508)
+.++.++|.+++.++.++.+.+| ++|++++.+||++...+ .+++..|++|+.+|.+.....
T Consensus 168 aSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~---------------- 231 (993)
T PLN02414 168 ASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYS---------------- 231 (993)
T ss_pred EeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccc----------------
Confidence 99999999999999888866644 78999999999987655 456778999999987431100
Q ss_pred hhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC-CC
Q 010538 183 PIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP-DL 261 (508)
Q Consensus 183 ~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~-d~ 261 (508)
++.+..+ +.+..|.+|.+.|+++|.++||+ +|++++| +++..+..++ +.
T Consensus 232 ----------------~~~v~~v-lvq~P~~~G~v~dv~~I~~~ah~------------~GaL~iV-aad~lal~~l~~p 281 (993)
T PLN02414 232 ----------------SGDVCGV-LVQYPATDGEVLDYAEFVKNAHA------------NGVKVVM-ATDLLALTMLKPP 281 (993)
T ss_pred ----------------cCceEEE-EEecCCCCeEEcCHHHHHHHHHH------------cCCEEEE-EECHHHhcCCCCH
Confidence 1122222 35666789999999999999998 8999999 8888888888 58
Q ss_pred CCCCCcEEEEeccccc-----cCCCcceEEEEechhHhhhccccccCceEEecccchhhh--hhccCccccccCCCCChh
Q 010538 262 SKYPVDFVVMSFYKIF-----GYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFV--KRRQGVEELFEDGTASFL 334 (508)
Q Consensus 262 ~~~~~D~~~~S~~K~~-----g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~gt~~~~ 334 (508)
.++|+||+++++|||. |||. .|++++++++...+.+.+.|+... ......|. .....+..|++.||.|+.
T Consensus 282 ge~GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~~r~~PgriVG~s~d--~~g~~~~~l~LqtReqhiRrEkaTsNic 358 (993)
T PLN02414 282 GEWGADIVVGSAQRFGVPMGYGGPH-AAFLATSQEYKRLMPGRIIGVSVD--SSGKPALRMAMQTREQHIRRDKATSNIC 358 (993)
T ss_pred hhccCcEEEECCCccccCCCCCCCC-eeEEEECHHHHhhCCCcccCcccC--CCCCcccccccccccchhhhcccccchh
Confidence 8999999999999998 4443 899999999866444467776321 11111111 112344678999999996
Q ss_pred HHHHHHHHHH-----HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC
Q 010538 335 SIASIRHGFN-----LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG 409 (508)
Q Consensus 335 ~~~~l~~al~-----~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 409 (508)
...++.+++. ++...|++++.+++.+++.++++.|.+. |+++..++. ..+++|++++ .
T Consensus 359 t~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-------G~~~~~~~~--------f~~vt~~~~~--~ 421 (993)
T PLN02414 359 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-------GFQVQSLPF--------FDTVKVKCSD--A 421 (993)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-------CCccCCCCC--------cCeEEEecCC--H
Confidence 6666655543 4455899999999999999999999875 688766532 5688888742 1
Q ss_pred CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHH
Q 010538 410 SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAK 489 (508)
Q Consensus 410 ~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~ 489 (508)
.++.+.|.++||.++.. ..+.+|+|+|.+||.+||+
T Consensus 422 -----~~v~~~L~~~gI~l~~~---------------------------------------~~~~lrvs~~e~~T~edId 457 (993)
T PLN02414 422 -----DAIADAAAKVGINLRVV---------------------------------------DANTVTVSFDETTTLEDVD 457 (993)
T ss_pred -----HHHHHHHHHCCCeeEEe---------------------------------------cCCeEEEEeeccCCHHHHH
Confidence 35889999999987652 1457999999999999999
Q ss_pred HHHHhhhh
Q 010538 490 VNRCSSFD 497 (508)
Q Consensus 490 ~l~~~~~~ 497 (508)
+|++++..
T Consensus 458 ~L~~~l~~ 465 (993)
T PLN02414 458 KLFKVFAG 465 (993)
T ss_pred HHHHHHcc
Confidence 99999863
No 48
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.7e-27 Score=243.35 Aligned_cols=347 Identities=14% Similarity=0.104 Sum_probs=247.0
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC--CCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN--ASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~~~~~~i~~t~g~t~a 115 (508)
.+.|.|+.+-...+ |+.+.+++.+..... ...|+.......+.+++.+.+.+..| .++++ +|++|+|+++|
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~-----~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~-eiivt~Ga~~a 101 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEG-----GTHYTPSAGIPELREAIAEKYKRRYGLDVDPEE-EIIVTAGAKEA 101 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcc-----cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-eEEEeCCHHHH
Confidence 36899998876444 555667765544321 10222233345556666666666666 35542 59999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc-CccccccccccccccccchhhhhcCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV-DNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~-~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
+.+++.++ ..+||+||+++..|+++.....++ |.+++.+|++... .+ ++|+++++ +++
T Consensus 102 l~~~~~a~-~~pGDeVlip~P~Y~~y~~~~~~~---gg~~v~v~l~~~~~~f-------------~~d~~~l~--~~i-- 160 (393)
T COG0436 102 LFLAFLAL-LNPGDEVLIPDPGYPSYEAAVKLA---GGKPVPVPLDEEENGF-------------KPDLEDLE--AAI-- 160 (393)
T ss_pred HHHHHHHh-cCCCCEEEEeCCCCcCHHHHHHhc---CCEEEEEeCCcCccCC-------------cCCHHHHH--hhc--
Confidence 99999999 789999999999999988877765 9999999975321 22 34789999 444
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC----CC
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY----PV 266 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~----~~ 266 (508)
+++||++++++++||||.+++.+++.++++ +|++||++||.|.++.. +..+.++.+. +.
T Consensus 161 ----~~ktk~i~ln~P~NPTGav~~~~~l~~i~~---------~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~ 227 (393)
T COG0436 161 ----TPKTKAIILNSPNNPTGAVYSKEELKAIVE---------LAREHDIIIISDEIYEELVYDGAEHPSILELAGARDR 227 (393)
T ss_pred ----CccceEEEEeCCCCCcCcCCCHHHHHHHHH---------HHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcce
Confidence 679999999999999999999998888887 67779999999999763 3223333222 34
Q ss_pred cEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
-+.+.|++|.|+ .+| +||++++ +++++.+... ......++ +.+...+..+++
T Consensus 228 ~i~i~s~SK~~~-mtGwRvG~~v~~~~~l~~~~~~~-----------------------~~~~~~~~-~~~~Q~aa~~aL 282 (393)
T COG0436 228 TITINSFSKTYG-MTGWRIGWVVGPPEELIAALRKL-----------------------KSYLTSCA-PTPAQYAAIAAL 282 (393)
T ss_pred EEEEeccccccc-ccccceeEeecChHHHHHHHHHH-----------------------HHhcccCC-CHHHHHHHHHHh
Confidence 577889999999 778 9999999 6666554422 11112233 444455555577
Q ss_pred HHHHh-cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC-CCCccCHHHHHHHH
Q 010538 344 NLINS-LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP-DGSWFGYREVEKLA 421 (508)
Q Consensus 344 ~~~~~-~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~L 421 (508)
+.-++ ..++..++...+.++.+.+.|.+. +|+.+..++.. +.+++.+++.. +.. ....++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~------~g~~~~~~p~G-------a~Y~~~~i~~~~d~~----~f~~~Ll 345 (393)
T COG0436 283 NGPQSDEVVEEMREEYRERRDLLVEALNEI------GGLSVVKPPEG-------AFYLFPKIPELLDSE----EFAKKLL 345 (393)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHhc------CCeeeccCCCe-------eEEEEeecCCCCCHH----HHHHHHH
Confidence 64322 235666788999999999999988 36888874432 68888888763 222 2356777
Q ss_pred hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 422 SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 422 ~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
++.||.|.+|..+..+. ..+++|+|+.. +.++++..++++.++++.
T Consensus 346 ~~~gV~v~PG~~Fg~~~--------------------------------g~~~vRis~~~--~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 346 EEAGVAVVPGSGFGEPP--------------------------------GEGYVRLSLAT--SEETLEEALRRLARFLAE 391 (393)
T ss_pred HhCCEEEecccccCCCC--------------------------------CCCeEEEEEec--CHHHHHHHHHHHHHHHHh
Confidence 88899999998665421 26899999995 448889888888877654
No 49
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=2.1e-26 Score=245.26 Aligned_cols=365 Identities=11% Similarity=0.010 Sum_probs=241.0
Q ss_pred eeeeCC-CCCCCCHHHHHHHHHHh-hccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 42 VYLDHA-GATLYSELQMEAIFRDF-TTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 42 iyld~~-~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
.|+.-+ .....+|.+.+++...- +.. .+|...........++..++++++++++|.+.. .+..++|++..+..+
T Consensus 71 ~~~g~G~~~~~~~p~i~~~~~~~~~~~~--~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l 146 (481)
T PRK04366 71 GFYPLGSCTMKYNPKINEKVARLPGFAE--LHPLQPEETVQGALELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGL 146 (481)
T ss_pred ceecCcccCCCCCHHHHHHHHhCcchhc--CCCCCChhhhhHHHHHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHH
Confidence 455555 34456777777765531 111 122211123445668888999999999999754 444455555544422
Q ss_pred --HhhcCCCCCC----eEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCC
Q 010538 120 --GEAFPWSHQS----SYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFP 193 (508)
Q Consensus 120 --~~~l~~~~g~----~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~ 193 (508)
++.+...+|+ +|+++...||++.... +..|++++.+|.+.++.+ |+++++ +++
T Consensus 147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~---~~~G~~vv~v~~~~~~~~---------------D~e~L~--~~i- 205 (481)
T PRK04366 147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASA---AMAGFKVVEIPSNEDGLV---------------DLEALK--AAV- 205 (481)
T ss_pred HHHHHHhhccCcCCCCEEEEcCCccHhHHHHH---HHcCCEEEEeecCCCCCc---------------CHHHHH--hhc-
Confidence 3333234444 8999999999988664 446999999999765555 688888 554
Q ss_pred CCCCCCCCceEEEEeCCCCCCccc-cCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-CCCCCCCCCcEEEE
Q 010538 194 ERDPAGDAYNLFAFPSECNFSGSR-FNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-PPDLSKYPVDFVVM 271 (508)
Q Consensus 194 ~~~~~~~~t~lv~~~~~~n~tG~~-~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-~~d~~~~~~D~~~~ 271 (508)
+++|++|++++++ +||.+ .|+++|.++||+ +|++++||++|..+.. .++..++++|++++
T Consensus 206 -----~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~------------~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~ 267 (481)
T PRK04366 206 -----GEDTAALMLTNPN-TLGLFERNILEIAEIVHE------------AGGLLYYDGANLNAILGKARPGDMGFDVVHL 267 (481)
T ss_pred -----ccCCeEEEEeCCC-CccccchHHHHHHHHHHH------------cCCEEEEEecChhhhcccCCccccCCCEEEE
Confidence 5678999999876 99987 589999999998 8999999999986532 35677889999999
Q ss_pred eccccccCCC-----cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHH
Q 010538 272 SFYKIFGYPT-----GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLI 346 (508)
Q Consensus 272 S~~K~~g~P~-----G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 346 (508)
|+||||++|. |+|++++++++.+.+.+.+.+.....+... +. .....++++.++.+...+.+....+..+
T Consensus 268 ~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~---~~--r~~~i~r~~a~t~~~l~~~~a~~~l~~~ 342 (481)
T PRK04366 268 NLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLD---YD--RPKSIGRVRAFYGNFGVLVRAYAYIRSL 342 (481)
T ss_pred echhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeec---cc--ccccCCCcccccCchHHHHHHHHHHHHH
Confidence 9999987664 367999999888777655443210011110 00 0111345666666655455555555555
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCC
Q 010538 347 NSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGI 426 (508)
Q Consensus 347 ~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI 426 (508)
...|++++.+++..+++||++.|+++. .+. .+. . ..+.+.|..+.......+..++.+.|.++||
T Consensus 343 G~~Gl~~~a~~~~~~a~~l~~~L~~~~------~~~--~~~-~------~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi 407 (481)
T PRK04366 343 GAEGLREVSEDAVLNANYLKARLKDIY------DLP--YDR-P------CMHEFVLSGKKLKETGVRTLDIAKRLLDYGF 407 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhC------ccc--CCC-C------eeEEEEEECccccccCCCHHHHHHHHHHCCc
Confidence 556677888999999999999998752 222 121 1 0222333332111111345679999999999
Q ss_pred eeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 427 QLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 427 ~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
.+..... + ....+.+|+|++.++|.+|||+++++|+++.+.+.
T Consensus 408 ~~~~~~~---p-------------------------------~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 408 HPPTIYF---P-------------------------------LIVPEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred cCCcccc---c-------------------------------cccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9663111 1 01257899999999999999999999998876543
No 50
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2e-26 Score=239.11 Aligned_cols=342 Identities=17% Similarity=0.160 Sum_probs=230.7
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
.+.|.|+.+....+ ++.+.+++.+.. ... ....|. ......++|+++++++|++++ +|++|+|+|+|+.
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-~~~---~~~~y~----~~~g~~~lr~~ia~~l~~~~~--~v~~~~g~t~al~ 97 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCI-EEG---EYCKYP----PPEGFPELRELILKDLGLDDD--EALITAGATESLY 97 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHH-hcC---CCCCCC----CCcchHHHHHHHHHhcCCCCC--cEEEeCCHHHHHH
Confidence 67899997765554 555555554433 211 111111 122367789999999999988 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc---cCccccccccccccccccchhhhhcCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA---VDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~---~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
+++.++ ..+|++|+++...|+.+ ...++..|++++.+|++.. ..+ |++.++ +++
T Consensus 98 ~~~~~~-~~~gd~vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~~---------------d~~~l~--~~~-- 154 (380)
T PRK06225 98 LVMRAF-LSPGDNAVTPDPGYLII---DNFASRFGAEVIEVPIYSEECNYKL---------------TPELVK--ENM-- 154 (380)
T ss_pred HHHHHh-cCCCCEEEEcCCCCcch---HHHHHHhCceEEeeccccccCCccC---------------CHHHHH--hhc--
Confidence 999998 57788899887655533 3445567999999987431 233 678888 554
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc---CCCCCCCCCCCCCcEEEE
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG---CVTQPPDLSKYPVDFVVM 271 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~---~g~~~~d~~~~~~D~~~~ 271 (508)
+++++++++++++||||.+++.+++.++++ +|+++|+++|+|+++. .+..+...-..+..+++.
T Consensus 155 ----~~~~~~v~l~~p~NptG~~~~~~~~~~i~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~ 221 (380)
T PRK06225 155 ----DENTRLIYLIDPLNPLGSSYTEEEIKEFAE---------IARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSY 221 (380)
T ss_pred ----CCCceEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEe
Confidence 456899999999999999999666665555 3455999999999874 222211111123467888
Q ss_pred eccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc
Q 010538 272 SFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL 349 (508)
Q Consensus 272 S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 349 (508)
|++|++| ++| +|++++++++++.+.+...+ . ...+.....+..++++...+
T Consensus 222 s~SK~~g-~~G~RiG~i~~~~~l~~~~~~~~~~------------------------~-~~~~~~~~~~a~~~l~~~~~- 274 (380)
T PRK06225 222 SFSKIFG-MAGLRIGAVVATPDLIEVVKSIVIN------------------------D-LGTNVIAQEAAIAGLKVKDE- 274 (380)
T ss_pred echhhcC-CccceeEEEecCHHHHHHHHHHHhc------------------------c-cCCCHHHHHHHHHHHhcchH-
Confidence 9999998 768 79999999887766543110 0 11233333333334432211
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe-cCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 350 TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY-GTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 350 g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
.++.+.+...++++++.+.|++++ ++.+. .+.. ++++++.++... ++..++.+.|.++||.+
T Consensus 275 ~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~~~~--------g~~~~~~~~~~~---~~~~~l~~~l~~~gi~v 337 (380)
T PRK06225 275 WIDRIRRTTFKNQKLIKEAVDEIE------GVFLPVYPSH--------GNMMVIDISEAG---IDPEDLVEYLLERKIFV 337 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc------CCccccCCCC--------CeEEEEEccccc---CCHHHHHHHHHHCCEEE
Confidence 145555666677778888888753 33222 1222 678888875421 34456888888999999
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
++|..|.... .++++|+|++. ++|+++++++.|+++++.++.
T Consensus 338 ~~g~~~~~~~--------------------------------~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 338 RQGTYTSKRF--------------------------------GDRYIRVSFSI--PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred cCCcccCcCC--------------------------------CCceEEEEeCC--CHHHHHHHHHHHHHHHHHhhc
Confidence 9987653321 25789999974 799999999999999987764
No 51
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=8.2e-27 Score=238.76 Aligned_cols=324 Identities=15% Similarity=0.078 Sum_probs=226.5
Q ss_pred CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEE
Q 010538 53 SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYM 132 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl 132 (508)
+|.+++++.+ .+.+ +.++.+.+..........+++++.++++++++ + .++ ++++++++..++.++ .++|++|+
T Consensus 17 ~~~v~~a~~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~--~iv-~~sg~~a~~~~~~~~-~~~gd~Vl 89 (349)
T cd06454 17 HPEVIEAAKE-ALDK-YGVGAGGSRLISGTSDLHEELEEELAEFHGKE-A--ALV-FSSGYAANDGVLSTL-AGKGDLII 89 (349)
T ss_pred CHHHHHHHHH-HHHH-hCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-C--EEE-eccHHHHHHHHHHHh-cCCCCEEE
Confidence 6777777655 4443 33332222222234677889999999999985 3 355 455567887777777 57899999
Q ss_pred EecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCC
Q 010538 133 YTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECN 212 (508)
Q Consensus 133 ~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n 212 (508)
++...|+++... ++..|++++.++.. |+++++ +.+++.. ..+++++|++++++|
T Consensus 90 ~~~~~~~~~~~~---~~~~g~~~~~~~~~--------------------~~~~le--~~i~~~~-~~~~~~~v~~~~~~~ 143 (349)
T cd06454 90 SDSLNHASIIDG---IRLSGAKKRIFKHN--------------------DMEDLE--KLLREAR-RPYGKKLIVTEGVYS 143 (349)
T ss_pred EehhhhHHHHHH---HHHcCCceEEecCC--------------------CHHHHH--HHHHHhh-ccCCCeEEEEecccc
Confidence 999888876543 34568888877531 233444 3332110 124678999999999
Q ss_pred CCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC--------CCCCCCCCcEEEEeccccccCCCcce
Q 010538 213 FSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP--------PDLSKYPVDFVVMSFYKIFGYPTGLG 284 (508)
Q Consensus 213 ~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~--------~d~~~~~~D~~~~S~~K~~g~P~G~G 284 (508)
+||...|+++|.++|++ +|+++|+|++|+.|..+ ++....+.|+++.|+||+++ +.| |
T Consensus 144 ~tG~~~~~~~i~~~~~~------------~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~g-G 209 (349)
T cd06454 144 MDGDIAPLPELVDLAKK------------YGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVG-G 209 (349)
T ss_pred CCCCccCHHHHHHHHHH------------cCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccC-C
Confidence 99999999999999998 99999999999876543 23334578999999999999 666 8
Q ss_pred EEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 010538 285 ALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMY 364 (508)
Q Consensus 285 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 364 (508)
+++.++++.+.+.+.... ....++.+...++++.++++.+.+ .+.+++++.+++++
T Consensus 210 ~i~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~ 265 (349)
T cd06454 210 YIAGSKELIDYLRSYARG----------------------FIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRY 265 (349)
T ss_pred EEECCHHHHHHHHHhchh----------------------hhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHH
Confidence 888888876655432110 011245667778888889888765 57788999999999
Q ss_pred HHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcC
Q 010538 365 VRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLG 444 (508)
Q Consensus 365 l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~ 444 (508)
+.+.|.++ ++.++.++. ..++++.++.. .+..++.+.|.++||.++.+......
T Consensus 266 l~~~l~~~-------g~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~L~~~gI~~~~~~~~~~~------- 319 (349)
T cd06454 266 LRRGLKEL-------GFPVGGSPS--------HIIPPLIGDDP----AKAVAFSDALLERGIYVQAIRYPTVP------- 319 (349)
T ss_pred HHHHHHhc-------CCcccCCCC--------CcEEEEeCCCh----HHHHHHHHHHHhCCceEEEecCCccC-------
Confidence 99999886 465554432 34444444321 12345888888889999874321110
Q ss_pred CChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 445 LSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 445 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
...+++|++++.++|.+|+++++++|+++
T Consensus 320 -------------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 320 -------------------------RGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -------------------------CCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 11478999999999999999999998753
No 52
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=240.01 Aligned_cols=341 Identities=14% Similarity=0.075 Sum_probs=229.5
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC--CCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN--ASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~~~~~~i~~t~g~t~a 115 (508)
++.+.|+.+-...+ ++.+.+++.+ ...+ ....|........+.+.+.+.+.+.+| ++++ +|++|+|+++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~-~~~~----~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~a 96 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAA-ALAD----GETFYTHNLGIPELREALARYVSRLHGVATPPE--RIAVTSSGVQA 96 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHH-HHhc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHH
Confidence 46788887765544 5555555443 3322 111222222233444555555555567 6777 89999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc-CccccccccccccccccchhhhhcCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV-DNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~-~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
+.+++.++ .++|+.|+++...|+.+... ++..|++++.+|.+.+. .. ..|+++++ +++
T Consensus 97 l~~~~~~l-~~~gd~vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~-------------~~d~~~l~--~~~-- 155 (382)
T PRK06108 97 LMLAAQAL-VGPGDEVVAVTPLWPNLVAA---PKILGARVVCVPLDFGGGGW-------------TLDLDRLL--AAI-- 155 (382)
T ss_pred HHHHHHHh-cCCCCEEEEeCCCccchHHH---HHHCCCEEEEeeCCCCCCCc-------------cCCHHHHH--Hhc--
Confidence 99999988 67889999998888766544 44569999999986422 11 11678888 554
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC--------CCCCC-CC
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP--------PDLSK-YP 265 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~--------~d~~~-~~ 265 (508)
.++++++++++++||||.++|.+++.++++ +|+++|+++|+|++++..... .++.. .+
T Consensus 156 ----~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~---------~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 222 (382)
T PRK06108 156 ----TPRTRALFINSPNNPTGWTASRDDLRAILA---------HCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDD 222 (382)
T ss_pred ----CccceEEEEECCCCCCCcccCHHHHHHHHH---------HHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcC
Confidence 357899999999999999999877666665 455599999999997643211 12221 13
Q ss_pred CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
..+++.|++|.|| ++| +|++++++++++.+..... +.....+.....++..++
T Consensus 223 ~~i~~~S~SK~~g-~~G~RiG~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~q~a~~~~l 277 (382)
T PRK06108 223 RIIFVNSFSKNWA-MTGWRLGWLVAPPALGQVLEKLIE------------------------YNTSCVAQFVQRAAVAAL 277 (382)
T ss_pred CEEEEeechhhcc-CcccceeeeeCCHHHHHHHHHHHH------------------------hcccCCChHHHHHHHHHH
Confidence 4588999999988 446 8999999988876654310 001122333333333344
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-h
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-S 422 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~ 422 (508)
+... ..+++++++++++++++.+.|+++ +++++..|.+ +.++++++++. .+..++.+.| +
T Consensus 278 ~~~~-~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~~--------g~~~~~~l~~~----~~~~~~~~~ll~ 338 (382)
T PRK06108 278 DEGE-DFVAELVARLRRSRDHLVDALRAL------PGVEVAKPDG--------AMYAFFRIPGV----TDSLALAKRLVD 338 (382)
T ss_pred hCCh-HHHHHHHHHHHHHHHHHHHHHHhC------CCCcccCCCe--------eEEEEEeCCCC----CCHHHHHHHHHH
Confidence 3211 125778889999999999999886 3677665543 67788888653 1233466655 6
Q ss_pred hCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 423 LSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 423 ~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
++||.+++|..|... ..+++|+|++. +.++++..++.|++++
T Consensus 339 ~~gV~v~pg~~f~~~---------------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 339 EAGLGLAPGTAFGPG---------------------------------GEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred hCCEEEeCchhhCCC---------------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 789999998755321 25789999998 8999999999888765
No 53
>PLN02452 phosphoserine transaminase
Probab=99.96 E-value=2.1e-26 Score=235.69 Aligned_cols=349 Identities=13% Similarity=0.092 Sum_probs=250.3
Q ss_pred CeeeeCCCCCCCCHHHHHHHHHHhhccccCCCC----CccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc-CChHHH
Q 010538 41 TVYLDHAGATLYSELQMEAIFRDFTTNVYGNPH----SQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT-SGATAA 115 (508)
Q Consensus 41 ~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t-~g~t~a 115 (508)
.+|+=.+|.+.+|+.|++++.++++. |.+.+ .....+....++++++++.+.++++++. +|+|+|. .|+|.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~--~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~-~y~v~~l~Gsgt~~ 83 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYN--WEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPD-NYEVLFLQGGASTQ 83 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhc--ccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCccHHH
Confidence 34555566777899999998876642 11111 1223455678999999999999999854 4677655 889999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+..+...+ ..+|+++++.....-+ ..+.+.+++.|...+.....+...... +++++++
T Consensus 84 ~ea~~~nl-~~~~~~~l~~~~G~fg-~r~~~~a~~~g~~~~~~~~~~~~~~~~------------~~~~~~~-------- 141 (365)
T PLN02452 84 FAAIPLNL-CKPGDKADFVVTGSWS-KKAAKEAKKYCKTNVIASGKDEKYTKI------------PSVSEWE-------- 141 (365)
T ss_pred HHHHHHhc-CCCCCeEEEEECCHHH-HHHHHHHHHhCCCcEEEecCCCCCCCC------------CChHHcC--------
Confidence 99999998 4566666555432222 246677777786444432222111100 1333343
Q ss_pred CCCCCCceEEEEeCCCCCCccc-cCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSR-FNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFY 274 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~-~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~ 274 (508)
.+++.+.|.++|..+.||+. .|++++. +++++||+++++|..|+|+.++++|+ +|+|
T Consensus 142 --~~~~~~~v~~~hnETstGv~~~~~~~i~------------------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saq 199 (365)
T PLN02452 142 --LTPDAKFVHICANETIHGVEFKDYPDVG------------------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQ 199 (365)
T ss_pred --CCCCCcEEEECCCCCCCcEecCcccccC------------------CCeEEEECCccccCcccCHHHcCEEE--Eecc
Confidence 14568999999999999995 7766552 47999999999999999999988866 6999
Q ss_pred ccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc-ChHH
Q 010538 275 KIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL-TVPA 353 (508)
Q Consensus 275 K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~ 353 (508)
|.+| |+|+|++++++++++++.+.... ..+|.... ......+|||+..++++..+++|+.+. |++.
T Consensus 200 K~lG-P~Gl~~v~vr~~~l~~~~~~~~~---------~~~~~~~~---~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~ 266 (365)
T PLN02452 200 KNVG-PSGVTIVIIRKDLIGNARPITPG---------MLDYKIHA---ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKA 266 (365)
T ss_pred cccC-CCCeEEEEEcHHHHhhcccCCCc---------hhhHHHHH---hcCCccCChhHHHHHHHHHHHHHHHHccCHHH
Confidence 9998 99999999999998876543111 11121111 122344799999999999999999886 8999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCC
Q 010538 354 ICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCF 433 (508)
Q Consensus 354 i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~ 433 (508)
+.+|.+++++++++.|++.+ |+ +.+.... ..++..+++|.+++.+ ...++.+.++++|+....|+.
T Consensus 267 ~~~r~~~~a~~l~~~l~~~~------G~--y~~~~~~--~~rs~~~vsF~~~~~~----~~~~f~~~~~~~g~~~~~G~r 332 (365)
T PLN02452 267 MEKRNIRKADLLYDAIDESN------GF--YVCPVEK--SVRSLMNVPFTLGGSE----LEAEFVKEAAKAGMVQLKGHR 332 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCC------Cc--ccCCCCh--HHhCCeEEEEEcCCch----hHHHHHHHHHHCCCcccCCcc
Confidence 99999999999999999863 45 2221110 0234679999987753 235689999999999988752
Q ss_pred CCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 434 CNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 434 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
. -+.+|+|+-...+.++|++|++.|++|.+
T Consensus 333 ~-------------------------------------~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 333 S-------------------------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred c-------------------------------------cCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 1 23499999999999999999999999865
No 54
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=5.4e-27 Score=242.51 Aligned_cols=326 Identities=14% Similarity=0.107 Sum_probs=224.5
Q ss_pred eeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhh----hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 43 YLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLA----TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 43 yld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
|||.+..+++.+.+++++.+ +..+. |.+ .+..+.+ .....+++++.+|+++|++. .++|++|++ ++.
T Consensus 14 YL~~~~~~~~~~~~~~~~~~-~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---~l~~~sG~~-a~~ 85 (370)
T PRK05937 14 FLGFSRSDTLVHEVEKRYRL-YCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---AFIVPSGYM-ANL 85 (370)
T ss_pred ccCCCCCHHHHHHHHHHHHH-hcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---EEEECChHH-HHH
Confidence 88888887777777666544 32221 332 2223333 67789999999999999964 478887775 555
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
.++..+ .++++.|++...+|+++...++.+ .|..+. ++. . |++.++ +.|++...
T Consensus 86 ~~~~~~-~~~~d~ii~d~~~H~sv~~~~~~~--~~~~~~-~~~-----~---------------d~~~l~--~~l~~~~~ 139 (370)
T PRK05937 86 GLCAHL-SSVTDYVLWDEQVHISVVYSLSVI--SGWHQS-FRH-----N---------------DLDHLE--SLLESCRQ 139 (370)
T ss_pred HHHHHh-CCCCCEEEEEhhhhHHHHHHHHHc--CCceEE-ecC-----C---------------CHHHHH--HHHHhhhc
Confidence 555555 456889999899999988776653 233332 322 1 345555 44432111
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCC----CCC---CcEEE
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLS----KYP---VDFVV 270 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~----~~~---~D~~~ 270 (508)
..+.+.+|++++++|++|.+.|+++|.++|++ +|+++++|++|+.|..+.+.. +++ .++.+
T Consensus 140 ~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~------------~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~ 207 (370)
T PRK05937 140 RSFGRIFIFVCSVYSFKGTLAPLEQIIALSKK------------YHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVL 207 (370)
T ss_pred cCCCcEEEEEecCCCCCCCccCHHHHHHHHHH------------cCCEEEEECCccccccCCCCCchHHhhCCCCCcEEE
Confidence 12456788899999999999999999999998 899999999999998888763 233 34677
Q ss_pred EeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcC
Q 010538 271 MSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLT 350 (508)
Q Consensus 271 ~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g 350 (508)
.|++|++| |.|.|+++. ++....+.... .+..+..+ .+.+.++++.++++++.+.+
T Consensus 208 ~tlsK~~g-~~G~~vl~~-~~~~~~~~~~~---------------------~~~~~s~~-~~~~~~~a~~aal~~l~~~~ 263 (370)
T PRK05937 208 VTYSKALG-SMGAALLSS-SEVKQDLMLNS---------------------PPLRYSTG-LPPHLLISIQVAYDFLSQEG 263 (370)
T ss_pred Eechhhhh-cCceEEEcC-HHHHHHHHHhC---------------------CCCeecCC-CCHHHHHHHHHHHHHHHhCc
Confidence 89999999 888777665 44333222110 02223333 55667888999999988776
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeecc
Q 010538 351 VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRT 430 (508)
Q Consensus 351 ~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 430 (508)
+.+++++.++++++.+.|... + + +.+..+.+++.+ ...+.+.|.++||.++.
T Consensus 264 -~~~~~~l~~l~~~l~~~l~~~-------~-----~----------~~~~~i~~~~~~-----~~~~~~~L~~~gi~v~~ 315 (370)
T PRK05937 264 -ELARKQLFRLKEYFAQKFSSA-------A-----P----------GCVQPIFLPGIS-----EQELYSKLVETGIRVGV 315 (370)
T ss_pred -HHHHHHHHHHHHHHHHhcCCC-------C-----C----------CCEEEEEeCChh-----HHHHHHHHHHCCeeEEe
Confidence 667889999999998877532 0 1 122334554432 23588899999998864
Q ss_pred CCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 431 GCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 431 g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
.|.+ ..+.+|+|++++||.||++++++.|+++++.+
T Consensus 316 --~~~~----------------------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 316 --VCFP----------------------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred --eCCC----------------------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3322 14689999999999999999999999887543
No 55
>PRK07908 hypothetical protein; Provisional
Probab=99.96 E-value=1.8e-26 Score=236.73 Aligned_cols=318 Identities=14% Similarity=0.108 Sum_probs=223.0
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
++.+.|+.+.... +|+.+++++.+.. .....+|. ......+|++++++++++++ +|++|+|+++++.
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~---------~~g~~~lr~aia~~~~~~~~--~I~it~Ga~~al~ 89 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARL-GDLAAYPS---------TEDERRARAAVAARHGRTPD--EVLLLAGAAEGFA 89 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHh-hHhhcCCC---------ccchHHHHHHHHHHhCcChh--hEEECCCHHHHHH
Confidence 6788898877644 4556666654433 22211121 12256789999999999998 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++. + .+++.++ . +|++......++..|.+++.+|++.+..+ |++.++
T Consensus 90 ~~~~-l--~~~~viv-~---~P~y~~~~~~~~~~G~~i~~v~~~~~~~~---------------d~~~l~---------- 137 (349)
T PRK07908 90 LLAR-L--RPRRAAV-V---HPSFTEPEAALRAAGIPVHRVVLDPPFRL---------------DPAAVP---------- 137 (349)
T ss_pred HHHh-c--CCCeEEE-e---CCCChHHHHHHHHcCCEEEeeccCcccCc---------------ChhHhc----------
Confidence 9888 4 4555444 3 57776666777778999999998754333 344443
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC--CCCCCCCCCC--CCcEEEEec
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC--VTQPPDLSKY--PVDFVVMSF 273 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~--g~~~~d~~~~--~~D~~~~S~ 273 (508)
++++++++++++||||.++|.++|.++++ ++.++|+|++++. ...+.++... +..+++.|+
T Consensus 138 --~~~~~i~l~np~NPTG~~~~~~~l~~l~~-------------~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~ 202 (349)
T PRK07908 138 --DDADLVVIGNPTNPTSVLHPAEQLLALRR-------------PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSL 202 (349)
T ss_pred --cCCCEEEEcCCCCCCCCCcCHHHHHHHHh-------------cCCEEEEECcchhhccCCccccccccCCCEEEEeec
Confidence 46789999999999999999999999987 4778888999862 2223344322 223667799
Q ss_pred cccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcCh
Q 010538 274 YKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTV 351 (508)
Q Consensus 274 ~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 351 (508)
||.++ ++| +||++++++.++.+.+....+ +.+.....++...++-.....+
T Consensus 203 SK~~~-l~GlRiG~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~ 255 (349)
T PRK07908 203 TKTWS-LAGLRVGYALGAPDVLARLTRGRAHW--------------------------PVGTLQLEAIAACCAPRAVAEA 255 (349)
T ss_pred ccccC-CccceeeeeecCHHHHHHHHhcCCCC--------------------------CccHHHHHHHHHHhcccchHHH
Confidence 99988 667 699999998887766542111 1222233333322220001125
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 352 PAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 352 ~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
+++++++.++++++.+.|+++ ++++..|+. ++++++++++ . ..+.+.|+++||.+++|
T Consensus 256 ~~~~~~~~~~r~~l~~~L~~~-------~~~~~~p~~--------g~~~~~~~~~--~-----~~~~~~l~~~gI~v~~g 313 (349)
T PRK07908 256 AADAARLAADRAEMVAGLRAV-------GARVVDPAA--------APFVLVRVPD--A-----ELLRKRLRERGIAVRRG 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-------CcEeccCCC--------ceEEEEECCc--H-----HHHHHHHHhCCEEEEEC
Confidence 677888999999999999876 577766544 7999998864 1 24888999999999998
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..+.. ..++++|||++ +.+|+++++++|+++++
T Consensus 314 ~~f~~---------------------------------~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 314 DTFPG---------------------------------LDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCCCC---------------------------------CCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 75421 12579999996 89999999999988753
No 56
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=1.7e-26 Score=240.29 Aligned_cols=347 Identities=13% Similarity=0.056 Sum_probs=230.4
Q ss_pred HHHHhhccCCCCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------CCC
Q 010538 29 IRATEFKRLENGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------ASM 101 (508)
Q Consensus 29 ~r~~~f~~~~~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~ 101 (508)
.|+ .++.- ++.++|+.+..+. +++.+.+++.+.. .. +. ..|... .....+|+.+|++++ +++
T Consensus 24 ~~~-~~~~~-~~~i~l~~g~~~~~~~~~v~~a~~~~~-~~---~~-~~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~ 92 (387)
T PRK08960 24 ANE-LEAAG-HDVIHLEIGEPDFTTAEPIVAAGQAAL-AA---GH-TRYTAA----RGLPALREAIAGFYAQRYGVDVDP 92 (387)
T ss_pred HHH-HHhcC-CCeEEeCCCCCCCCCCHHHHHHHHHHH-hc---CC-CccCCC----CCCHHHHHHHHHHHHHHhCCCCCh
Confidence 454 56655 7899999998874 5666777664433 21 11 112211 124556777777763 677
Q ss_pred CCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccccccccccc
Q 010538 102 KDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 102 ~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~ 181 (508)
+ +|++|+|+++|+.+++.++ ..+|+.|+++...|+++..+... .|.+++.+|++.++.. ..
T Consensus 93 ~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~-------------~~ 153 (387)
T PRK08960 93 E--RILVTPGGSGALLLASSLL-VDPGKHWLLADPGYPCNRHFLRL---VEGAAQLVPVGPDSRY-------------QL 153 (387)
T ss_pred h--hEEEccCcHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHHh---cCCeEEEEecCcccCC-------------CC
Confidence 7 8999999999999999998 68899999999999888766554 4889999998654322 11
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---CCCC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC---VTQP 258 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~---g~~~ 258 (508)
|++.++ +++ .++++++++++++||||.++|.+++.++++ +|+++|+++++|+++.. +..+
T Consensus 154 d~~~l~--~~~------~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~---------~~~~~~~~li~De~Y~~~~~~~~~ 216 (387)
T PRK08960 154 TPALVE--RHW------NADTVGALVASPANPTGTLLSRDELAALSQ---------ALRARGGHLVVDEIYHGLTYGVDA 216 (387)
T ss_pred CHHHHH--HHh------CccceEEEEECCCCCCCcCcCHHHHHHHHH---------HHHHcCCEEEEEccccccccCCCC
Confidence 678888 544 456789999999999999999888777765 45559999999998753 1112
Q ss_pred CCCCCCC-CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhH
Q 010538 259 PDLSKYP-VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLS 335 (508)
Q Consensus 259 ~d~~~~~-~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 335 (508)
..+...+ ..+++.|++|.+| ++| +||+++++++++.+...... +..+ .+...
T Consensus 217 ~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~~-----------------------~~~~-~s~~~ 271 (387)
T PRK08960 217 ASVLEVDDDAFVLNSFSKYFG-MTGWRLGWLVAPPAAVPELEKLAQN-----------------------LYIS-ASTPA 271 (387)
T ss_pred CChhhccCCEEEEeecccccC-CcccEEEEEEcCHHHHHHHHHHHhh-----------------------hccC-CCHHH
Confidence 2222222 3478899999998 658 99999999887766543110 1112 23333
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe-cCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 336 IASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY-GTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 336 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
..++.++++-..+..+...++.+.+.++.+.+.|++. ++.+. .|.+ +.++++++++.. .+.
T Consensus 272 q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~p~g--------~~f~~~~~~~~~---~~~ 333 (387)
T PRK08960 272 QHAALACFEPETLAILEARRAEFARRRDFLLPALREL-------GFGIAVEPQG--------AFYLYADISAFG---GDA 333 (387)
T ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-------CCcCCcCCCe--------eEEEEEeccccC---CCH
Confidence 3333334431001235666777888888898999875 44442 2322 688888886521 123
Q ss_pred HHHHHH-HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHH
Q 010538 415 REVEKL-ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRC 493 (508)
Q Consensus 415 ~~l~~~-L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~ 493 (508)
.++.+. ++++||.+.+|..|.... .++++|++++. +.+++...++
T Consensus 334 ~~~~~~ll~~~gi~v~pg~~f~~~~--------------------------------~~~~iRi~~~~--~~~~l~~al~ 379 (387)
T PRK08960 334 FAFCRHFLETEHVAFTPGLDFGRHQ--------------------------------AGQHVRFAYTQ--SLPRLQEAVE 379 (387)
T ss_pred HHHHHHHHHhCCEEEcCchHhCCCC--------------------------------CCCeEEEEecC--CHHHHHHHHH
Confidence 346655 467899999987653211 14689999995 5667666666
Q ss_pred hhhhhh
Q 010538 494 SSFDFV 499 (508)
Q Consensus 494 ~~~~~~ 499 (508)
.+++++
T Consensus 380 ~l~~~~ 385 (387)
T PRK08960 380 RIARGL 385 (387)
T ss_pred HHHHHH
Confidence 666544
No 57
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.7e-26 Score=235.73 Aligned_cols=323 Identities=16% Similarity=0.091 Sum_probs=228.5
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
+++++|+.+....+ ++.+.+++.+...... ..|+. . ...++|+.+|++++++++ +|++|+|+++++.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-----~~y~~----~-~~~~lr~aia~~~~~~~~--~I~it~G~~~al~ 91 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL-----RLYPD----P-NADALRQAIAAYYGLDPE--QVFVGNGSDEVLA 91 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhh-----hcCCC----C-cHHHHHHHHHHHhCCCHH--HEEEcCCHHHHHH
Confidence 57899999887654 5556666543322111 11211 1 136789999999999998 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++.++ .++|+.|+++...|+.+..+ ++..|++++.+|.+++..+ |+++++ +
T Consensus 92 ~~~~~l-~~~gd~vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~------- 143 (353)
T PRK05387 92 HAFLAF-FNHDRPLLFPDITYSFYPVY---AGLYGIPYEEIPLDDDFSI---------------DVEDYL--R------- 143 (353)
T ss_pred HHHHHh-cCCCCEEEEeCCCHHHHHHH---HHHcCCEEEEeecCCCCCC---------------CHHHHH--h-------
Confidence 999998 68899999998777655544 4456999999998765444 577776 1
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCC-CCCC-CCCCCcEEEEecc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQ-PPDL-SKYPVDFVVMSFY 274 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~-~~d~-~~~~~D~~~~S~~ 274 (508)
.+++|++++++||||.++|.+++.++++. + +++++|+|+++.. +.. ...+ ...+..+++.|++
T Consensus 144 ---~~~~v~~~~P~NPtG~~~~~~~~~~l~~~---------~--~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~S 209 (353)
T PRK05387 144 ---PNGGIIFPNPNAPTGIALPLAEIERILAA---------N--PDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFS 209 (353)
T ss_pred ---cCCEEEEeCCCCCCCCCCCHHHHHHHHHh---------C--CCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehh
Confidence 34788999999999999999999999985 1 3999999998752 111 1111 1224469999999
Q ss_pred ccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChH
Q 010538 275 KIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVP 352 (508)
Q Consensus 275 K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 352 (508)
|.+| .+| +||++.+++.++.+..... .+...+.+.....++..+++. ....+
T Consensus 210 K~~~-~~GlR~G~~~~~~~~~~~l~~~~~-----------------------~~~~~~~~~~~q~~~~~~l~~--~~~~~ 263 (353)
T PRK05387 210 KSRS-LAGLRVGFAIGHPELIEALNRVKN-----------------------SFNSYPLDRLAQAGAIAAIED--EAYFE 263 (353)
T ss_pred Hhhc-chhhhceeeecCHHHHHHHHHhhc-----------------------cCCCCCcCHHHHHHHHHHhcC--HHHHH
Confidence 9998 447 8999999888776654310 011223445555555555542 11256
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCC
Q 010538 353 AICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGC 432 (508)
Q Consensus 353 ~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~ 432 (508)
+.++++.+.++++.+.|++. ++++. ++. ++++++.+++. +..++.+.|.++||.++.
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~-------g~~~~-~~~--------~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~-- 320 (353)
T PRK05387 264 ETRAKVIATRERLVEELEAL-------GFEVL-PSK--------ANFVFARHPSH-----DAAELAAKLRERGIIVRH-- 320 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHC-------CCeEC-CCc--------CcEEEEECCCC-----CHHHHHHHHHHCCEEEEE--
Confidence 77888899999999999886 56654 322 67888887643 334588889999999974
Q ss_pred CCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 433 FCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 433 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
|..+. ..+++|+|++ +.+++++++++|+++++
T Consensus 321 -~~~~~--------------------------------~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 321 -FNKPR--------------------------------IDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred -CCCCC--------------------------------CCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 21110 1578999998 78999999999988753
No 58
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.95 E-value=2.7e-26 Score=239.95 Aligned_cols=348 Identities=16% Similarity=0.073 Sum_probs=242.5
Q ss_pred CCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEcCChHHHH
Q 010538 40 GTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFTSGATAAL 116 (508)
Q Consensus 40 ~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t~g~t~al 116 (508)
+.+-| .++.++++|.+.+++...+ ...+ ++|++.+..+....+.+++ +++.+++++|++.. .|++++ +|+|+
T Consensus 20 ~~~~~-~~~~~~~~~~v~~a~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~s-gt~a~ 94 (402)
T cd00378 20 ETLEL-IASENFTSPAVMEAMGSDL-TNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--NVQPHS-GSQAN 94 (402)
T ss_pred hCeee-eccCCcCCHHHHHHhcccc-cccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--eeecCC-cHHHH
Confidence 44444 3667777999988876533 2233 5666554444444444454 78889999999866 566654 57899
Q ss_pred HHHHhhcCCCCCCeEEEecccccchHHHHHH--HHhcCCeEEEEccCC---ccCccccccccccccccccchhhhhcCCC
Q 010538 117 KLVGEAFPWSHQSSYMYTMENHNSVLGIREY--ALSQGAAAFAIDVEE---AVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 117 ~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~--~~~~G~~v~~v~~~~---~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
.+++.++ .++|++|+++..+|+++...... ++..|.++..++++. ++.+ |+++++ ++
T Consensus 95 ~~~l~~l-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i---------------d~~~l~--~~ 156 (402)
T cd00378 95 LAVYFAL-LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLI---------------DYDALE--KM 156 (402)
T ss_pred HHHHHHh-cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCc---------------CHHHHH--HH
Confidence 9999999 78899999999898876543221 445688777777653 2344 688888 55
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-----CCCCCCCCC
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-----PPDLSKYPV 266 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-----~~d~~~~~~ 266 (508)
+. .++++++++++++| |...|+++|.++|++ +|+++++|++|+.|.. +.++. ++
T Consensus 157 i~-----~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~------------~~~~li~D~a~~~g~~~~g~~~~~~~--~~ 215 (402)
T cd00378 157 AL-----EFKPKLIVAGASAY--PRPIDFKRFREIADE------------VGAYLLVDMAHVAGLVAGGVFPNPLP--GA 215 (402)
T ss_pred HH-----hCCCCEEEecCccc--CCCcCHHHHHHHHHh------------cCCEEEEEccchhhhhhcccCCCccc--CC
Confidence 42 24678888877654 677899999999998 9999999999866542 33444 67
Q ss_pred cEEEEeccccccCCCcceEEEEec-hhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTGLGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
|++++|+||+++||.| |+++.++ ++.+++...... ...+++....++++..++..
T Consensus 216 dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~~~~-----------------------~~~~~~~~~~~~a~~~al~~ 271 (402)
T cd00378 216 DVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAVFP-----------------------GLQGGPHLHVIAAKAVALKE 271 (402)
T ss_pred cEEEeccccCCCCCCc-eEEEeccHHHHHHHHHHhCc-----------------------cccCCchHHHHHHHHHHHHH
Confidence 9999999998866876 7777776 777665433111 11244555667776767765
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
+...+.+++.+++.++++++.+.|.++ +++++..+.. ++++++.+++.. .+...+.+.|+++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~~-------~~~v~v~~~~~~---~~~~~~~~~l~~~g 334 (402)
T cd00378 272 ALEPEFKAYAKQVVENAKALAEALKER-------GFKVVSGGTD-------NHLVLVDLRPKG---ITGKAAEDALEEAG 334 (402)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhC-------CCeEeecCCC-------CeEEEEeCCccC---CCHHHHHHHHHHcC
Confidence 544356788899999999999999886 5776643222 788989886421 12345778889999
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC----CHHHHHHHHHhhhhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS----TFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~----t~eev~~l~~~~~~~~~~ 501 (508)
|.++.+....... +.....++|++++..+ +.+|++.+++.|+++++.
T Consensus 335 I~v~~~~~p~~~~-----------------------------~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 335 ITVNKNTLPWDPS-----------------------------SPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred cEEcCCcCCCCCC-----------------------------CCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 9998754322110 0112568999998865 799999999999987654
No 59
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=3.7e-26 Score=234.04 Aligned_cols=321 Identities=17% Similarity=0.153 Sum_probs=228.2
Q ss_pred CCCeeeeCCC-CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAG-ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
++.|.|..+. ..++||.+++++.+. ..... .|... . .+++|+.+|++++++++ +|++|+|+++++.
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~-~~~~~-----~y~~~----~-~~~lr~~ia~~~~~~~~--~i~~~~G~~~~l~ 85 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAE-ADKLH-----RYPDP----D-PAELKQALADYYGVDPE--QILLGNGSDEIIE 85 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHh-HHHhh-----cCCCC----C-HHHHHHHHHHHhCcChH--HEEEcCCHHHHHH
Confidence 5688887655 444577777776543 22111 11110 1 26789999999999888 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
.++.++ ..+|++|+++...|+.+ ...++..|++++.+|++.++.+ |+++++ +++
T Consensus 86 ~~~~~l-~~~gd~v~~~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~---------------d~~~l~--~~~----- 139 (346)
T TIGR01141 86 LLIRAF-LEPGDAVLVPPPTYSMY---EISAKIHGAEVVKVPLDEDGQL---------------DLEDIL--VAI----- 139 (346)
T ss_pred HHHHHh-cCCCCEEEEcCCCHHHH---HHHHHHcCCeEEEeccCCCCCC---------------CHHHHH--Hhc-----
Confidence 999888 57889999888666533 3345567999999998766544 678888 443
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCCC-CCCCCcEEEEec
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPDL-SKYPVDFVVMSF 273 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d~-~~~~~D~~~~S~ 273 (508)
++++++|++++++||||.++|++++.++++. ++ +++++++|++|+.-. .+.+. ...+.++++.|+
T Consensus 140 -~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~---------~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~ 208 (346)
T TIGR01141 140 -DDKPKLVFLCSPNNPTGNLLSRSDIEAVLER---------TP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTL 208 (346)
T ss_pred -CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHh---------CC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehh
Confidence 4678999999999999999999999999995 34 599999999987211 11111 112345778999
Q ss_pred cccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcCh
Q 010538 274 YKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTV 351 (508)
Q Consensus 274 ~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 351 (508)
+|++| ++| +|++++++++++.+++.... .+.+.+.+.++..+++... .+
T Consensus 209 sK~~g-~~G~r~G~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~l~~~~--~~ 259 (346)
T TIGR01141 209 SKAFG-LAGLRIGYAIANAEIIDALNKVRAP--------------------------FNLSRLAQAAAIAALRDDD--FI 259 (346)
T ss_pred hHhhh-chhhhceeeecCHHHHHHHHhccCC--------------------------CCCCHHHHHHHHHHhCCHH--HH
Confidence 99997 446 79999998887776654111 1123333333333443321 36
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 352 PAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 352 ~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
+++.+++.++++++++.|+++ +++++..+ . ++++++.+++ + ..++.+.|.++||.+++|
T Consensus 260 ~~~~~~~~~~~~~l~~~L~~~------~g~~~~~~-~--------g~~~~~~~~~-~-----~~~~~~~L~~~gI~v~~g 318 (346)
T TIGR01141 260 EKTVEEINAERERLYDGLKKL------PGLEVYPS-D--------ANFVLIRFPR-D-----ADALFEALLEKGIIVRDL 318 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHhc------CCCEECCC-c--------CCEEEEecCC-C-----HHHHHHHHHHCCeEEEeC
Confidence 788899999999999999886 36765432 2 6889998864 2 245888898999999998
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
..+. .. ++++|+|++ |.+|++++++.|+
T Consensus 319 ~~f~---------------------------------~~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 319 NSYP---------------------------------GL-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CCcC---------------------------------CC-CCeEEEecC---CHHHHHHHHHHhC
Confidence 6431 11 578999987 8999999998763
No 60
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-25 Score=234.28 Aligned_cols=348 Identities=14% Similarity=0.082 Sum_probs=229.4
Q ss_pred CCCeeeeCCCCC--CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CC-CCceEEEcCChH
Q 010538 39 NGTVYLDHAGAT--LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SM-KDYKCIFTSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~-~~~~i~~t~g~t 113 (508)
.+.++|+.+... .+++.+.+++.+..... ....|........+.+++.+.+++.+|. ++ + +|++|+|++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~--~I~it~Ga~ 112 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERG----GVQAYTEYRGDADIRELLAARLAAFTGAPVDAAD--ELIITPGTQ 112 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcC----CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--CEEEeCCcH
Confidence 778999987755 34566666665533211 0112221122345566666677777785 55 6 899999999
Q ss_pred HHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCC
Q 010538 114 AALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFP 193 (508)
Q Consensus 114 ~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~ 193 (508)
+++.+++.++ ..+|++|++....|+.+. ..++..|.+++.++++....-+ .-..|+++++ +++
T Consensus 113 ~al~~~~~~l-~~~Gd~Vlv~~P~y~~~~---~~~~~~g~~v~~v~~~~~~~~~----------~~~~d~~~l~--~~~- 175 (405)
T PRK06207 113 GALFLAVAAT-VARGDKVAIVQPDYFANR---KLVEFFEGEMVPVQLDYLSADK----------RAGLDLDQLE--EAF- 175 (405)
T ss_pred HHHHHHHHHh-cCCCCEEEEeCCCchhHH---HHHHHcCCEEEEEeccccCccc----------CCCcCHHHHH--Hhh-
Confidence 9999999998 688999999887776554 4445569999999875210000 0012688888 555
Q ss_pred CCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC----C
Q 010538 194 ERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY----P 265 (508)
Q Consensus 194 ~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~----~ 265 (508)
.+++++|++++++||||.+++.+++.++++ +|+++|++||+|++++. +..+..+... +
T Consensus 176 -----~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~---------~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~ 241 (405)
T PRK06207 176 -----KAGVRVFLFSNPNNPAGVVYSAEEIAQIAA---------LARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPE 241 (405)
T ss_pred -----hhcCeEEEECCCCCCCCcCCCHHHHHHHHH---------HHHHcCCEEEEeccccccccCCCCCCchhcCCCCcC
Confidence 346799999999999999999777766665 45559999999999874 2222222221 2
Q ss_pred CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
.-+++.|++|.|+ .+| +||+++++++++.+..... ....++ +.....++..++
T Consensus 242 ~vi~i~SfSK~~~-lpGlRiG~ii~~~~l~~~~~~~~~-----------------------~~~~~~-~~~~q~a~~~~l 296 (405)
T PRK06207 242 NVITIMGPSKTES-LSGYRLGVAFGSPAIIDRMEKLQA-----------------------IVSLRA-AGYSQAVLRTWF 296 (405)
T ss_pred cEEEEecchhhcc-CcccceEEEEcCHHHHHHHHHHHh-----------------------HhccCC-CHHHHHHHHHHH
Confidence 2388999999998 447 8999999888776654310 001111 222233333333
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHh-
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLAS- 422 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~- 422 (508)
+.- ...+++..+++.+.++++.+.|+++ +++.+..|.+ +.++|++++... ++..++.+.|.
T Consensus 297 ~~~-~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~p~g--------g~fl~~~l~~~~---~~~~~~~~~l~~ 358 (405)
T PRK06207 297 SEP-DGWMKDRIARHQAIRDDLLRVLRGV------EGVFVRAPQA--------GSYLFPRLPRLA---VSLHDFVKILRL 358 (405)
T ss_pred hCc-HHHHHHHHHHHHHHHHHHHHHHhcC------CCceecCCCe--------eEEEEEeCcccC---CCHHHHHHHHHH
Confidence 210 0114566677778888898888876 3566655543 789999986421 23345777774
Q ss_pred hCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 423 LSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 423 ~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
++||.+.+|..|... ..+++|||++. +.++++..++.|.++++-
T Consensus 359 ~~gV~v~pG~~F~~~---------------------------------~~~~~Ris~~~--~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 359 QAGVIVTPGTEFSPH---------------------------------TADSIRLNFSQ--DHAAAVAAAERIAQLIER 402 (405)
T ss_pred hcCEEEeCchHhCCC---------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 789999998755321 25789999995 688898888888877653
No 61
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=6.9e-26 Score=253.51 Aligned_cols=327 Identities=12% Similarity=0.038 Sum_probs=239.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChH----HHHHHHHhhcCCCCCC----eEEEecccccchHHHHHHHHh
Q 010538 79 SLATCDIVRAAREQVLDYFNASMKDYKCIFTSGAT----AALKLVGEAFPWSHQS----SYMYTMENHNSVLGIREYALS 150 (508)
Q Consensus 79 ~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t----~al~~~~~~l~~~~g~----~vl~~~~~h~s~~~~~~~~~~ 150 (508)
.....+++.++++++++++|+ + .|+|++++| +++++++.++...+|+ +||++..+|.+....+.+
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~--~--~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~--- 635 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGF--D--SFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAM--- 635 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--C--eEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHH---
Confidence 345678899999999999999 4 799999999 8999999999434366 899999999998876655
Q ss_pred cCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCC
Q 010538 151 QGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNP 230 (508)
Q Consensus 151 ~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~ 230 (508)
.|++++.||.+.++.+ |+++++ +.++++ +++|++|++++++|.+|...|+++|.+++|+
T Consensus 636 ~G~~vv~v~~d~~G~v---------------Dle~L~--~~i~~~---~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~- 694 (993)
T PLN02414 636 CGMKIVVVGTDAKGNI---------------NIEELR--KAAEAH---KDNLAALMVTYPSTHGVYEEGIDEICDIIHD- 694 (993)
T ss_pred CCCEEEEeccCCCCCc---------------CHHHHH--HHHhcc---CCCeEEEEEECCCccccccchHHHHHHHHHH-
Confidence 5999999999877777 688898 666422 3578999999999999999999999999998
Q ss_pred ccccccCCCCCCCeEEEEeccccCCC-CCCCCCCCCCcEEEEeccccccCCCc-----ceEEEEechhHhhhccccccCc
Q 010538 231 ERILEISPFSKGRWMVLIDAAKGCVT-QPPDLSKYPVDFVVMSFYKIFGYPTG-----LGALIMRNDAAKLLKNTYFSGG 304 (508)
Q Consensus 231 ~~~~~~~~~~~~g~~vivD~a~~~g~-~~~d~~~~~~D~~~~S~~K~~g~P~G-----~G~l~~~~~~~~~l~~~~~g~~ 304 (508)
+|+++++|++|..+. ...+..++++||+++|.||+|++|.| +|++++++++ .|.+.|+.
T Consensus 695 -----------~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L----~p~lPg~~ 759 (993)
T PLN02414 695 -----------NGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL----APFLPSHP 759 (993)
T ss_pred -----------cCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhh----cccCCCCc
Confidence 999999999999888 55566789999999999997776764 9999999854 45555442
Q ss_pred eEEecccchhhhhhccCccccccCCCCChh---HHHHHHHHHHHHHhcC---hHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 010538 305 TVAASIADIDFVKRRQGVEELFEDGTASFL---SIASIRHGFNLINSLT---VPAICRHIASLGMYVRKVLLSLRHENGA 378 (508)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~---~~~~l~~al~~~~~~g---~~~i~~~~~~l~~~l~~~L~~l~~~~~~ 378 (508)
.+... .+..+ ......||.+.. +...+-.|..++...| +.+..++...+++|+++.|.+..
T Consensus 760 v~~~~----~~~~r----~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~----- 826 (993)
T PLN02414 760 VVPTG----GIPRP----EKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHY----- 826 (993)
T ss_pred cccCC----Ccccc----cCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhC-----
Confidence 11100 01000 011124665542 2245555666665555 55559999999999999997742
Q ss_pred ceEEEecCCCCCcccCCCCceEEEEeeCCC-CCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcC
Q 010538 379 DVCTIYGTYTSEVSYHDTGSMVSFNLKRPD-GSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAG 457 (508)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~ 457 (508)
++.+.++.+.. .+-..+.+...+ ...++..++.+.|.++||.... ..+ +
T Consensus 827 -~~~~~~~~~~~------~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt-~~~-p--------------------- 876 (993)
T PLN02414 827 -PVLFRGKNGTC------AHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPT-MSW-P--------------------- 876 (993)
T ss_pred -CccccCCCCCe------eeeEEEeccccccccCCCHHHHHHHHHHcCcEEee-ecc-c---------------------
Confidence 34443332210 122223333221 1114456799999999998654 211 1
Q ss_pred CccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 458 HVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 458 ~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
..+.+||+++.++|.+|+|+++++|..+....+.
T Consensus 877 -------------v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 877 -------------VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred -------------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 1678999999999999999999999998877664
No 62
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=234.78 Aligned_cols=335 Identities=10% Similarity=0.017 Sum_probs=223.0
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------CCC-CCceEEEcC
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------ASM-KDYKCIFTS 110 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~-~~~~i~~t~ 110 (508)
++.+.|+.+.... +++.+.+++.+ ...... ...|.. .....+|+.+|++++ +++ + +|++|+
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~-~~~~~~---~~~y~~-----~G~~~lr~aia~~~~~~~g~~~~~~~--~I~it~ 100 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVH-TANQKE---SYGYTL-----SGIQEFHEAVTEYYNNTHNVILNADK--EVLLLM 100 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHH-HHhccc---cCCCCC-----CCcHHHHHHHHHHHHHHhCCCCCCCC--eEEECC
Confidence 5678887776543 34444444433 322110 011110 113456666666654 566 5 899999
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCC
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
|+++++.+++.++ .++|+.|+++...|+.+... ++..|++++.+|++.++.+ .+|+++++ +
T Consensus 101 G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~-------------~~d~~~l~--~ 161 (399)
T PRK07681 101 GSQDGLVHLPMVY-ANPGDIILVPDPGYTAYETG---IQMAGATSYYMPLKKENDF-------------LPDLELIP--E 161 (399)
T ss_pred CcHHHHHHHHHHh-CCCCCEEEECCCCccchHHH---HHhcCCEEEEEecCCCCCC-------------cCCHHHHH--H
Confidence 9999999999998 68899999998777766554 4456999999998754322 12678887 4
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCC---
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSK--- 263 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~--- 263 (508)
++ .+++++|++++++||||.+++.+++.++++ +|+++|++||+|++++. +..+..+..
T Consensus 162 ~~------~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~---------~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~ 226 (399)
T PRK07681 162 EI------ADKAKMMILNFPGNPVPAMAHEDFFKEVIA---------FAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG 226 (399)
T ss_pred hc------cccceEEEEeCCCCCcCcCCCHHHHHHHHH---------HHHHcCeEEEEeccchhheeCCCCCCChhhCCC
Confidence 44 357899999999999999999777766665 45559999999999873 222222221
Q ss_pred -CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHH
Q 010538 264 -YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 264 -~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~ 340 (508)
.+..+++.|++|.|| .+| +||+++++++++.+..... ....+.+.....++.
T Consensus 227 ~~~~~i~~~S~SK~~~-~~GlRiG~~i~~~~l~~~~~~~~~------------------------~~~~~~s~~~q~~~~ 281 (399)
T PRK07681 227 AKEVGVEINSLSKSYS-LAGSRIGYMIGNEEIVRALTQFKS------------------------NTDYGVFLPIQKAAC 281 (399)
T ss_pred CcccEEEEeecccccC-CccceeEEEecCHHHHHHHHHHHh------------------------hcccCCCHHHHHHHH
Confidence 134588899999998 558 8999999888776654310 011122333333334
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL 420 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 420 (508)
.+++.-. ..+++.++++++.++++.+.|++. ++++..|.+ +.++|+++++. .+..++.+.
T Consensus 282 ~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~p~~--------g~f~~~~l~~~----~~~~~~~~~ 341 (399)
T PRK07681 282 AALRNGA-AFCEKNRGIYQERRDTLVDGFRTF-------GWNVDKPAG--------SMFVWAEIPKG----WTSLSFAYA 341 (399)
T ss_pred HHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe--------eeEEEEECCCC----CCHHHHHHH
Confidence 3443211 124666777888889999999875 566654543 78899888642 223346666
Q ss_pred Hhh-CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 421 ASL-SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 421 L~~-~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
|.+ +||.+.+|..|... .++++|||++ .+.++++.+++.|++.
T Consensus 342 l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~--~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 342 LMDRANVVVTPGHAFGPH---------------------------------GEGFVRIALV--QDEEVLQQAVENIRNS 385 (399)
T ss_pred HHHhCCEEEeCChhhCcC---------------------------------CCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 654 89999998755321 1578999998 4789999999998873
No 63
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.9e-25 Score=229.41 Aligned_cols=334 Identities=13% Similarity=0.039 Sum_probs=231.8
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD 103 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~ 103 (508)
.+....+ +.....++.++|+.+.... ++|.+++++.+ .. .. ..|+. . ...++|++++++++++++
T Consensus 39 ~~~~~~~-~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~-~~-----~~-~~Yp~-~----~~~~lr~~ia~~~~~~~~- 104 (380)
T PLN03026 39 PFEVLSA-QLGRKPEDIVKLDANENPYGPPPEVLEALGN-MK-----FP-YVYPD-P----ESRRLRAALAEDSGLESE- 104 (380)
T ss_pred ChHHHHH-HhCCCccceEEccCCCCCCCCCHHHHHHHHh-hH-----hh-ccCCC-C----CHHHHHHHHHHHhCcChh-
Confidence 4554444 4332225789999986543 46666665432 11 01 11111 1 145789999999999988
Q ss_pred ceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccch
Q 010538 104 YKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 104 ~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
+|++|+|+++++.+++.++ .++|++|+++...|+.+ ...++..|++++.+|.+.+..+ |+
T Consensus 105 -~I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P~y~~y---~~~~~~~g~~~~~v~~~~~~~~---------------d~ 164 (380)
T PLN03026 105 -NILVGCGADELIDLLMRCV-LDPGDKIIDCPPTFGMY---VFDAAVNGAEVIKVPRTPDFSL---------------DV 164 (380)
T ss_pred -hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChHHH---HHHHHHcCCEEEEeecCCCCCc---------------CH
Confidence 8999999999999999988 57899999888655433 3344567999999998654444 57
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCC
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPD 260 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d 260 (508)
++++ +++. ++++++|++++++||||.++|.+++.++++. . ++||+|+++..-. ....
T Consensus 165 ~~l~--~~~~-----~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~------------~-~~vi~DeaY~~~~~~~~~~~ 224 (380)
T PLN03026 165 PRIV--EAVE-----THKPKLLFLTSPNNPDGSIISDDDLLKILEL------------P-ILVVLDEAYIEFSTQESRMK 224 (380)
T ss_pred HHHH--HHHh-----ccCCcEEEEeCCCCCCCCCCCHHHHHHHHhc------------C-CEEEEECcchhhcCCcchHH
Confidence 7887 4441 4578999999999999999999999999985 3 8999999985311 1111
Q ss_pred -CCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHH
Q 010538 261 -LSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIA 337 (508)
Q Consensus 261 -~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 337 (508)
+...+..+++.|++|.|| ++| +||++++++.++.+..... ....+.....
T Consensus 225 ~~~~~~~viv~~SfSK~~g-laGlRiGy~~~~~~~i~~l~~~~~--------------------------~~~~~~~~q~ 277 (380)
T PLN03026 225 WVKKYDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ--------------------------PYNVSVAAEV 277 (380)
T ss_pred HHHhCCCEEEEecchHhhc-CccccceeeecCHHHHHHHHHhcC--------------------------CCCCCHHHHH
Confidence 222345688999999999 768 8999999888776553311 1123344445
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHH
Q 010538 338 SIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREV 417 (508)
Q Consensus 338 ~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 417 (508)
++.++++.. ..+++.++++.+.++++.+.|+++. ++.+ .++. ++++++++++. .+..++
T Consensus 278 aa~~aL~~~--~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~-~p~~--------~~f~~~~~~~~----~~~~~~ 336 (380)
T PLN03026 278 AACAALSNP--KYLEDVKNALVEERERLFGLLKEVP------FLEP-YPSD--------ANFILCRVTSG----RDAKKL 336 (380)
T ss_pred HHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCC------CCeE-CCCC--------CeEEEEECCCC----CCHHHH
Confidence 555555421 1256778888999999999998872 3444 2332 78999987642 233457
Q ss_pred HHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 418 EKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 418 ~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.+.|.++||.|+.+.. .+ .++++|||++ +.++++++++++++
T Consensus 337 ~~~l~~~gI~v~~~~~--~~---------------------------------~~~~lRis~~---~~~~~~~l~~al~~ 378 (380)
T PLN03026 337 KEDLAKMGVMVRHYNS--KE---------------------------------LKGYIRVSVG---KPEHTDALMEALKQ 378 (380)
T ss_pred HHHHHHCCeEEEECCC--CC---------------------------------CCCEEEEecC---CHHHHHHHHHHHHH
Confidence 8888899999987532 10 1578999999 88999999999876
Q ss_pred h
Q 010538 498 F 498 (508)
Q Consensus 498 ~ 498 (508)
+
T Consensus 379 ~ 379 (380)
T PLN03026 379 L 379 (380)
T ss_pred h
Confidence 4
No 64
>PRK09105 putative aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=230.69 Aligned_cols=319 Identities=17% Similarity=0.105 Sum_probs=225.6
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
++.++||.+.... +|+.+++++.+.. ... ..|+. . ...++|+.+++++|++++ +|++|+|+++++.
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-~~~-----~~Y~~----~-~~~~Lr~aia~~~~v~~e--~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSA-ALS-----GRYDL----E-LEDDLRTLFAAQEGLPAD--HVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHH-HHh-----cCCCC----c-hHHHHHHHHHHHhCcChh--hEEEcCChHHHHH
Confidence 6789999998754 4677777765433 111 11221 1 156788999999999998 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++.++ ..+|++|++++..|+.+.. .++..|.+++.+|.+.+..+ |+++++ +.
T Consensus 110 ~~~~~l-~~~gd~Vli~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~------ 162 (370)
T PRK09105 110 YAVLAF-TSPTAGLVTADPTYEAGWR---AADAQGAPVAKVPLRADGAH---------------DVKAML--AA------ 162 (370)
T ss_pred HHHHHH-cCCCCEEEEeCCChHHHHH---HHHHcCCeEEEecCCCCCCC---------------CHHHHH--hc------
Confidence 999998 5788999999877766644 44556999999998754444 577777 32
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCCC--CCCCCCCCc-EEEEec
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQP--PDLSKYPVD-FVVMSF 273 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~~--~d~~~~~~D-~~~~S~ 273 (508)
.++++++++++++||||.++|.+++.++++. ++ +++++|+|+++.. +..+ .++.....+ +++.|+
T Consensus 163 -~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~---------~~-~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~Sf 231 (370)
T PRK09105 163 -DPNAGLIYICNPNNPTGTVTPRADIEWLLAN---------KP-AGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTF 231 (370)
T ss_pred -CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHh---------CC-CCcEEEEECchHHhccCcchHHHHhhCCCEEEEecc
Confidence 2467999999999999999999999999873 32 5999999999842 2111 222222334 666799
Q ss_pred cccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcCh
Q 010538 274 YKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTV 351 (508)
Q Consensus 274 ~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 351 (508)
+|+|| ++| +||++++++.++.+.+. +. ...+.....+..++++. ...+
T Consensus 232 SK~~g-~~GlRiG~~v~~~~~i~~l~~~--~~-------------------------~~~~~~~~~aa~~~L~~--~~~~ 281 (370)
T PRK09105 232 SKLYG-MAGMRLGLAAARPDLLAKLARF--GH-------------------------NPLPVPAAAAGLASLRD--PKLV 281 (370)
T ss_pred cHhhc-CCccceeeeecCHHHHHHHHhc--CC-------------------------CCcCHHHHHHHHHHHhC--HHHH
Confidence 99999 668 99999998887766543 11 11333333333444432 1235
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 352 PAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 352 ~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
+...+++.+.++++.+.|+++ ++++..+. +++++++++ . +..++.+.|.++||.++.
T Consensus 282 ~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~---------~~f~~~~~~-~-----~~~~l~~~L~~~gI~v~~- 338 (370)
T PRK09105 282 PQRRAENAAVREDTIAWLKKK-------GYKCTPSQ---------ANCFMVDVK-R-----PAKAVADAMAKQGVFIGR- 338 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-------CCCcCCCC---------CcEEEEeCC-C-----CHHHHHHHHHHCCcEEec-
Confidence 677788899999999999886 56655432 556656653 1 223578888888999832
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
.| .. .++++|+|++ +.++++++++++++++
T Consensus 339 -~~-~~---------------------------------~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 339 -SW-PI---------------------------------WPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -CC-CC---------------------------------CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 22 11 1578999998 7899999999998875
No 65
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.95 E-value=3.1e-25 Score=227.85 Aligned_cols=334 Identities=16% Similarity=0.108 Sum_probs=227.2
Q ss_pred CCCeeeeCCCCC----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGAT----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~ 114 (508)
++.-|+|.++.. +.+|.+++++.+.. .. ++.....+..........+++++.++++++.+ + .|++++|++
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~-~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~--~i~~~~G~~- 87 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGA-EQ-YGAGSTASRLVSGNSPLHEELEEELAEWKGTE-A--ALLFSSGYL- 87 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHH-Hh-cCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC-C--EEEECchHH-
Confidence 344455554432 24577888775543 32 22221111111223456778999999999863 4 688887755
Q ss_pred HHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 115 ALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 115 al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
++..++.++ .++|++|++....|+++....+ ..|++++.++.. |++.++ +.+++
T Consensus 88 ~~~~~l~~~-~~~gd~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~--------------------d~~~l~--~~~~~ 141 (360)
T TIGR00858 88 ANVGVISAL-VGKGDLILSDALNHASLIDGCR---LSGARVRRYRHN--------------------DVEHLE--RLLEK 141 (360)
T ss_pred HHHHHHHHh-CCCCCEEEEEccccHHHHHHHH---hcCCceEEecCC--------------------CHHHHH--HHHHH
Confidence 444566776 5789999999888887765543 458888877641 345555 44421
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC---------CCCCC
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD---------LSKYP 265 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d---------~~~~~ 265 (508)
. .++++++|++.+++|+||...|+++|.++|++ +|+++|+|++|+.+..+.+ +...+
T Consensus 142 ~--~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~------------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
T TIGR00858 142 N--RGERRKLIVTDGVFSMDGDIAPLPQLVALAER------------YGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEP 207 (360)
T ss_pred c--ccCCCeEEEEeCCccCCCCCcCHHHHHHHHHH------------cCcEEEEECcccccCcCCCCCchHHhcCCCccC
Confidence 1 11467999999999999999999999999998 8999999999987643322 22236
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
.|+++.|+||+|+ +.| |++++++++++.+.+.... ..+ .++.+..+++++.+++++
T Consensus 208 ~~i~i~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~a~~~al~~ 263 (360)
T TIGR00858 208 VDIQVGTLSKALG-SYG-AYVAGSQALIDYLINRART---------------------LIF-STALPPAVAAAALAALEL 263 (360)
T ss_pred CcEEEEechhhhh-ccC-cEEEcCHHHHHHHHHhCcc---------------------cee-cCCCCHHHHHHHHHHHHH
Confidence 7899999999999 777 9999888877655432110 001 122344556677778887
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
+.. .+.+.+++.++++++.+.|+++ ++++..+ . ++++++.+++. .+..++.+.|.++|
T Consensus 264 ~~~--~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~-~--------~~~~~~~~~~~----~~~~~~~~~l~~~g 321 (360)
T TIGR00858 264 IQE--EPWRREKLLALIARLRAGLEAL-------GFTLMPS-C--------TPIVPVIIGDN----ASALALAEELQQQG 321 (360)
T ss_pred Hhh--CHHHHHHHHHHHHHHHHHHHHc-------CCccCCC-C--------CCEEEEEeCCH----HHHHHHHHHHHHCC
Confidence 654 3678899999999999999886 4555422 2 67888887542 12345888888999
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
|.+.++..+..+. ..+++|+|++.++|.+|+++++++|+
T Consensus 322 I~v~~~~~~~~~~--------------------------------~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 322 IFVGAIRPPTVPA--------------------------------GTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred eeEeeeCCCCCCC--------------------------------CCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 9998754322110 14689999999999999999998764
No 66
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.9e-25 Score=227.74 Aligned_cols=331 Identities=14% Similarity=0.115 Sum_probs=233.1
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD 103 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~ 103 (508)
....+++ +|+. ++.+.|+.+.... +++.+.+++.+.. ......|. ....++|+.+|++++++++
T Consensus 18 ~~~~~~~-~~~~--~~~i~l~~n~~~~~~~~~v~~a~~~~~-~~~~~~p~----------~g~~~lr~~ia~~~~~~~~- 82 (359)
T PRK03158 18 SIEEVKR-EYGL--EKIVKLASNENPYGPSPKVKEAIAAHL-DELALYPD----------GYAPELRTKVAKHLGVDEE- 82 (359)
T ss_pred CHHHHHH-hcCC--CceEEecCCCCCCCCCHHHHHHHHHHH-HHhhcCCC----------CcHHHHHHHHHHHhCCCHH-
Confidence 5666777 7874 4788887665433 4666666654432 22111111 1256789999999999888
Q ss_pred ceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccch
Q 010538 104 YKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 104 ~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
+|++|+|+++++.+++.++ .++|+.|+++...|+. ....+...|.++..+|.+ +..+ |+
T Consensus 83 -~i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~p~y~~---~~~~~~~~g~~~~~~~~~-~~~~---------------d~ 141 (359)
T PRK03158 83 -QLLFGAGLDEVIQMISRAL-LNPGTNTVMAEPTFSQ---YRHNAIIEGAEVREVPLK-DGGH---------------DL 141 (359)
T ss_pred -HEEECCCHHHHHHHHHHHH-hCCCCEEEEcCCCHHH---HHHHHHHcCCeEEEEecC-CCCc---------------CH
Confidence 8999999999999999988 6789999988755554 444455679999999986 3333 57
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC----CCC
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT----QPP 259 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~----~~~ 259 (508)
++++ +++ +++++++++++++||||.++|.+++.++++. ++ +|+++|+|+++.... .+.
T Consensus 142 ~~l~--~~~------~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~---------~~-~~~~ii~De~y~~~~~~~~~~~ 203 (359)
T PRK03158 142 EAML--KAI------DEQTKIVWICNPNNPTGTYVNHEELLSFLES---------VP-SHVLVVLDEAYYEYVTAEDYPD 203 (359)
T ss_pred HHHH--Hhc------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHh---------CC-CCcEEEEECchHhhcCCccccc
Confidence 7887 444 4578999999999999999999999999985 33 599999999986422 111
Q ss_pred CC---CCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 260 DL---SKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 260 d~---~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
.+ ...+..+++.|++|.|| .+| +||+++++++++.+..... ....+..
T Consensus 204 ~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~v~~~~~~~~~~~~~~--------------------------~~~~~~~ 256 (359)
T PRK03158 204 TLPLLEKYENLIVLRTFSKAYG-LAALRVGYGIASEELIEKLNIARP--------------------------PFNTTRI 256 (359)
T ss_pred HHHHHHhcCCEEEEEechHhhc-CcchhhehhcCCHHHHHHHHHhcC--------------------------CCCCCHH
Confidence 11 12345688899999999 657 6999999988776654310 0122344
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
...++..+++. ...++.+.+..++.++++.+.|++. ++.++ ++. +++++++++. +.
T Consensus 257 ~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~-~~~--------g~~i~~~~~~------~~ 312 (359)
T PRK03158 257 AQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-------GLFYY-PSQ--------TNFIFVDTGR------DA 312 (359)
T ss_pred HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-------CCeeC-CCc--------CcEEEEECCC------CH
Confidence 44444444432 1124566667778888888888775 45554 322 6788887632 22
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
.++.+.|.++||.+++|..+.. ++++||+++ +.+|+++++++
T Consensus 313 ~~~~~~l~~~gv~v~~g~~f~~-----------------------------------~~~iRi~~~---~~~~~~~l~~a 354 (359)
T PRK03158 313 NELFEALLKKGYIVRSGAALGF-----------------------------------PTGVRITIG---LKEQNDKIIEL 354 (359)
T ss_pred HHHHHHHHHCCeEEeeCCCCCC-----------------------------------CCeEEEecC---CHHHHHHHHHH
Confidence 3578888889999999875421 578999988 99999999999
Q ss_pred hhhh
Q 010538 495 SFDF 498 (508)
Q Consensus 495 ~~~~ 498 (508)
|+++
T Consensus 355 l~~~ 358 (359)
T PRK03158 355 LKEL 358 (359)
T ss_pred HHHh
Confidence 9876
No 67
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2.1e-25 Score=229.81 Aligned_cols=337 Identities=16% Similarity=0.124 Sum_probs=229.6
Q ss_pred CCCCCCCCchHHHHHHhhccCCCCCeeeeCCCC-CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHH
Q 010538 17 YGYPNAPKSIDQIRATEFKRLENGTVYLDHAGA-TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLD 95 (508)
Q Consensus 17 ~~~~~~~~~~~~~r~~~f~~~~~~~iyld~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~ 95 (508)
|..+. .....++ +|.....++++|+.+.. -.++|.+++++.+... .....|. . ..+++|+.+|+
T Consensus 16 ~~~~~---~~~~~~~-~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~-----~-----~~~~lr~~ia~ 80 (361)
T PRK00950 16 YVPGK---SKEEIAR-EYGIDPESIIKLGSNENPLGPSPKAVEAIEKELS-KIHRYPE-----P-----DAPELREALSK 80 (361)
T ss_pred CCCCC---CHHHHHH-HhCCCccceEEccCCCCCCCCCHHHHHHHHHHHH-hhcCCCC-----C-----CHHHHHHHHHH
Confidence 54444 5666777 88754347899976643 2346667776654332 2111121 1 13778999999
Q ss_pred HcCCCCCCceEEE-cCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccc
Q 010538 96 YFNASMKDYKCIF-TSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLV 174 (508)
Q Consensus 96 ~~~~~~~~~~i~~-t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~ 174 (508)
+++++++ +|++ |+|+++++.+++.++ .++|+.|+++...|+. +...++..|++++.+|.+.+..+
T Consensus 81 ~~~~~~~--~i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~-------- 146 (361)
T PRK00950 81 YTGVPVE--NIIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTPTFSY---YEISAKAHGAKPVYAKREEDFSL-------- 146 (361)
T ss_pred HhCCCHH--HEEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCCChHH---HHHHHHHcCCEEEEeecCCCCCc--------
Confidence 9999988 8988 789999999999888 6788999988755543 33445667999999986654344
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC 254 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~ 254 (508)
++++++ +++ +++++++++++++||||.++|.+++.+++++ +|+++|+|++|..
T Consensus 147 -------~~~~l~--~~~------~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~------------~~~~li~De~y~~ 199 (361)
T PRK00950 147 -------DVDSVL--NAI------TEKTKVIFLCTPNNPTGNLIPEEDIRKILES------------TDALVFVDEAYVE 199 (361)
T ss_pred -------CHHHHH--HHh------ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHH------------CCcEEEEECchhh
Confidence 578888 544 3568999999999999999999999999997 8999999999964
Q ss_pred CCCCCCC----CCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 255 VTQPPDL----SKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 255 g~~~~d~----~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
.. ..+. ...+.-+++.|++|.+| .+| +|++++++++++.+......
T Consensus 200 ~~-~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~~-------------------------- 251 (361)
T PRK00950 200 FA-EYDYTPLALEYDNLIIGRTFSKVFG-LAGLRIGYGFVPEWLIDYYMRAKTP-------------------------- 251 (361)
T ss_pred hC-ccchHHHHHhcCCEEEEEeehHhhc-CchhhcchhcCCHHHHHHHHHhcCC--------------------------
Confidence 22 1111 11123477889999998 557 89999998887665543100
Q ss_pred CCCChhHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC
Q 010538 329 GTASFLSIASIRHGFNLINSL-TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP 407 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 407 (508)
...+.....++..+++ .. .+++..++++++++++.+.|. +++. ++. ++++++++++
T Consensus 252 ~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~----------~~~~-~~~--------~~~i~~~~~~- 308 (361)
T PRK00950 252 FSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP----------FKVY-PSE--------ANFVLVDVTP- 308 (361)
T ss_pred CCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC----------eeEC-CCc--------ceEEEEECCC-
Confidence 0122233333333332 21 145566666667777665553 3333 222 6888888843
Q ss_pred CCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHH
Q 010538 408 DGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFED 487 (508)
Q Consensus 408 ~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ee 487 (508)
.+..++.+.|.++||.+++|..+.. ..++++|+|++ +.+|
T Consensus 309 ----~~~~~~~~~l~~~gv~v~~~~~f~~---------------------------------~~~~~lRis~~---~~~~ 348 (361)
T PRK00950 309 ----MTAKEFCEELLKRGVIVRDCTSFRG---------------------------------LGDYYIRVSIG---TFEE 348 (361)
T ss_pred ----CCHHHHHHHHHHCCEEEeeCCccCC---------------------------------CCCCeEEEECC---CHHH
Confidence 2345688888889999998754311 12578999998 8899
Q ss_pred HHHHHHhhhhhhh
Q 010538 488 AKVNRCSSFDFVN 500 (508)
Q Consensus 488 v~~l~~~~~~~~~ 500 (508)
+++++++|+++++
T Consensus 349 ~~~l~~~L~~il~ 361 (361)
T PRK00950 349 NERFLEILKEIVE 361 (361)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999988753
No 68
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=3.5e-25 Score=229.73 Aligned_cols=335 Identities=16% Similarity=0.092 Sum_probs=227.8
Q ss_pred CCCeeeeCCCC---CC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGA---TL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~---~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~ 114 (508)
++.-|+|..+. +. ++|.+++++.+.+. . +..+...+..........+++++.++++++. ++ .+++++ +++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~-~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~--~i~~~~-g~~ 110 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAAR-R-YGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ER--ALLFSS-GYA 110 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHH-h-cCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-Cc--EEEECc-HHH
Confidence 45666666544 33 46788888766543 2 2211111111112345678899999999995 34 455554 556
Q ss_pred HHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 115 ALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 115 al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
++..++.++ .++|++|+++...|+++..... ..|.+++.++.. |+++++ +.+++
T Consensus 111 ~~~~~l~~~-~~~gd~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~--------------------d~~~l~--~~i~~ 164 (385)
T PRK05958 111 ANLAVLTAL-AGKGDLIVSDKLNHASLIDGAR---LSRARVRRYPHN--------------------DVDALE--ALLAK 164 (385)
T ss_pred HHHHHHHHh-CCCCCEEEEeCccCHHHHHHHH---hcCCceEEeCCC--------------------CHHHHH--HHHHh
Confidence 666676776 6889999999999988775543 358888888753 244555 44421
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC---------CCCCCC
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP---------DLSKYP 265 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~---------d~~~~~ 265 (508)
..+.+.++++.++.|++|.+.|+++|.++|++ +|+++|+|++|+.|..+. ++...+
T Consensus 165 ---~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~------------~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~ 229 (385)
T PRK05958 165 ---WRAGRALIVTESVFSMDGDLAPLAELVALARR------------HGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEP 229 (385)
T ss_pred ---ccCCCeEEEEEecccCCCCcCCHHHHHHHHHH------------hCCEEEEECcccccccCCCCCchHHhhCCCCCC
Confidence 11246888888999999999999999999998 999999999998654321 222223
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
.++++.|+||+++ +.| |+++.++++.+.+..... .. ...++.+..+++++.+++++
T Consensus 230 ~~i~~~s~sK~~~-~~G-g~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~~~aa~~aal~~ 285 (385)
T PRK05958 230 DVILVGTLGKALG-SSG-AAVLGSETLIDYLINRAR---------------------PF-IFTTALPPAQAAAARAALRI 285 (385)
T ss_pred ceEEEEechhhcc-cCC-cEEEcCHHHHHHHHHhCc---------------------cc-eecCCCCHHHHHHHHHHHHH
Confidence 4588999999998 767 888888777654432100 00 11223455667777788887
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
+.+. +.+.+++.++++++.+.|+++ ++++..+. +++++|.+++. .+..++.+.|.++|
T Consensus 286 ~~~~--~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~l~~~g 343 (385)
T PRK05958 286 LRRE--PERRERLAALIARLRAGLRAL-------GFQLMDSQ---------SAIQPLIVGDN----ERALALAAALQEQG 343 (385)
T ss_pred HhcC--HHHHHHHHHHHHHHHHHHHHc-------CCCcCCCC---------CCEEEEEeCCH----HHHHHHHHHHHHCC
Confidence 7553 678899999999999999886 45554332 67888887542 12345788888899
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
|.++++..+..+ ...+++|||++.++|.+|++++++.|+++
T Consensus 344 I~v~~~~~~~~~--------------------------------~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 344 FWVGAIRPPTVP--------------------------------AGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ceEecccCCCCC--------------------------------CCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 999874321111 01468999999999999999999998765
No 69
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.95 E-value=7.1e-25 Score=208.59 Aligned_cols=352 Identities=11% Similarity=0.057 Sum_probs=264.6
Q ss_pred CCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCC
Q 010538 47 AGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWS 126 (508)
Q Consensus 47 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~ 126 (508)
.+...+++++++++....+ + ..+++..++++++++-+...|..... +..++..+++.||..++..+ ..
T Consensus 23 PGPsnl~~~V~~A~~~~~l---------g-h~sPe~~qIm~~v~egikyVFkT~n~-~tf~isgsGh~g~E~al~N~-le 90 (385)
T KOG2862|consen 23 PGPSNLSGRVQEAMSRPSL---------G-HMSPEFVQIMDEVLEGIKYVFKTANA-QTFVISGSGHSGWEAALVNL-LE 90 (385)
T ss_pred CCCcCCCHHHHHhhcCCcc---------c-cCCHHHHHHHHHHHHHHHHHhccCCC-ceEEEecCCcchHHHHHHhh-cC
Confidence 4455568888877643221 1 23455778889999999999987554 37888888999999999888 67
Q ss_pred CCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEE
Q 010538 127 HQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFA 206 (508)
Q Consensus 127 ~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~ 206 (508)
+||+|++....--+ ..+...+++.|++|..|+.+..... .++.+. +.|. ..++++|+
T Consensus 91 Pgd~vLv~~~G~wg-~ra~D~~~r~ga~V~~v~~~~G~~~---------------~le~i~--~~ls-----qh~p~~vf 147 (385)
T KOG2862|consen 91 PGDNVLVVSTGTWG-QRAADCARRYGAEVDVVEADIGQAV---------------PLEEIT--EKLS-----QHKPKAVF 147 (385)
T ss_pred CCCeEEEEEechHH-HHHHHHHHhhCceeeEEecCcccCc---------------cHHHHH--HHHH-----hcCCceEE
Confidence 89988877532211 3467788899999999988765444 466676 5553 36789999
Q ss_pred EeCCCCCCccccC-HHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceE
Q 010538 207 FPSECNFSGSRFN-LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGA 285 (508)
Q Consensus 207 ~~~~~n~tG~~~~-i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~ 285 (508)
++|..+.||...| ++.+.++||+ |+++++||++.+.|..++.+.+|++|+.....+|.+++|+|++.
T Consensus 148 v~hgdsSTgV~q~~~~~~g~lc~k------------~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsi 215 (385)
T KOG2862|consen 148 VTHGDSSTGVLQDLLAISGELCHK------------HEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSI 215 (385)
T ss_pred EEecCccccccchHHHHHHHHhhc------------CCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcce
Confidence 9999999999999 7788888997 99999999999999999999999999999999999999999999
Q ss_pred EEEechhHhhhccccccCceEEeccc---chhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 010538 286 LIMRNDAAKLLKNTYFSGGTVAASIA---DIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLG 362 (508)
Q Consensus 286 l~~~~~~~~~l~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 362 (508)
+..++++.++++..=.+ ...+.++ ...|+.. ..+-+.+.-|+++..++++.+||+.+.+.|++++.+++++++
T Consensus 216 isfS~ka~~~~~~rK~~--~~~~yFd~~~~~~~wgc--~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s 291 (385)
T KOG2862|consen 216 ISFSDKALEAIRDRKTK--PVSFYFDILRLGNFWGC--DGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMS 291 (385)
T ss_pred eecCHHHHHHHhhccCC--ceEEEEeHHhhcchhcc--CCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998877533111 1111111 1122211 223366778999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhC-CCeeccCCCCCchHHHh
Q 010538 363 MYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLS-GIQLRTGCFCNPGACAK 441 (508)
Q Consensus 363 ~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~~~ 441 (508)
++++..|+++ |++....... .+...+..+.++-. +|.+++..++..+ ++.+..|....
T Consensus 292 ~~l~~~l~~~-------GLq~fv~~e~----~rlptvttv~vp~g----vDw~dVv~~~~~~~~vei~gglg~~------ 350 (385)
T KOG2862|consen 292 KWLKLSLEAL-------GLQLFVVDEE----LRLPTVTTVKVPYG----VDWKDVVAYAMSHYVVEIGGGLGPT------ 350 (385)
T ss_pred HHHHHHHHHh-------CccceecChh----hccCcceeeecCCC----CCHHHHHHHHHHhcCEEeccccCCC------
Confidence 9999999997 6666543332 23355556666533 4556788888776 66676664322
Q ss_pred hcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC-CCCHHHHHHHHHhhhhhh
Q 010538 442 YLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY-MSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 442 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~eev~~l~~~~~~~~ 499 (508)
.+..+||.+.. --+.+-|+..+++|+.-+
T Consensus 351 -----------------------------~gKv~RIGl~gcna~~e~i~~v~~ll~~al 380 (385)
T KOG2862|consen 351 -----------------------------VGKVFRIGLLGCNANVEYIDNVVELLKLAL 380 (385)
T ss_pred -----------------------------cccEEEEEEeeccCCcHHHHHHHHHHHHHH
Confidence 25689999664 458899999998877544
No 70
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=2.1e-25 Score=234.32 Aligned_cols=349 Identities=15% Similarity=0.054 Sum_probs=239.8
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t~g~t~a 115 (508)
++.+.|+.+.+ ++++.+++++...+. +.+ +++++.+..+....+..++ +++.+++++|++.. .|++++ +|+|
T Consensus 25 ~~~~~l~~~~n-~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~--~i~~~s-gt~a 99 (416)
T PRK00011 25 EEHIELIASEN-FVSPAVMEAQGSVLT-NKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYA--NVQPHS-GSQA 99 (416)
T ss_pred hcCeeeecccC-cCCHHHHHHHhchhh-cccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce--eeecCC-chHH
Confidence 56788886544 478999888755432 222 4555544444444555655 78899999999876 676665 4679
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHH--HHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIRE--YALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASF 192 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~--~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l 192 (508)
+.+++.++ .++|++|+++..+|+++..... .+...|.+++.++++. ++.+ |+++++ +++
T Consensus 100 l~~~l~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------d~~~l~--~~i 161 (416)
T PRK00011 100 NAAVYFAL-LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLI---------------DYDEVE--KLA 161 (416)
T ss_pred HHHHHHHh-cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCc---------------CHHHHH--HHH
Confidence 99999998 7889999999999986542211 1233467888888763 3444 678888 555
Q ss_pred CCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-----CCCCCCCCCc
Q 010538 193 PERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-----PPDLSKYPVD 267 (508)
Q Consensus 193 ~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-----~~d~~~~~~D 267 (508)
. .+++++|++++ +.+|...|+++|.++|++ +|+++++|++|+.|.. +.++. ++|
T Consensus 162 ~-----~~~~k~v~~~~--~~~~~~~~~~~I~~la~~------------~~~~livD~a~~~g~~~~g~~~~~~~--~~d 220 (416)
T PRK00011 162 L-----EHKPKLIIAGA--SAYSRPIDFKRFREIADE------------VGAYLMVDMAHIAGLVAAGVHPSPVP--HAD 220 (416)
T ss_pred H-----hcCCCEEEECC--CcCCCccCHHHHHHHHHH------------cCCEEEEECcchhcccccCccCCCCC--CCc
Confidence 2 13678888764 346778899999999998 8999999999987654 34444 689
Q ss_pred EEEEeccccccCCCcceEEEEe-chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLI 346 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 346 (508)
++++|+||++++|.| |+++.+ +++.+.++..... ...+++....++++..++..+
T Consensus 221 i~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~-----------------------~~~~~~~~~~~aa~~~a~~~~ 276 (416)
T PRK00011 221 VVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFP-----------------------GIQGGPLMHVIAAKAVAFKEA 276 (416)
T ss_pred EEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCc-----------------------cccCCccHHHHHHHHHHHHHH
Confidence 999999998866876 888885 5776655433111 112344455666666565544
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCC
Q 010538 347 NSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGI 426 (508)
Q Consensus 347 ~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI 426 (508)
.+.+++++.+++.++++++++.|+++ |+++..... .++++++.+++.. ++...+.+.|.++||
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~-------~~~~~~i~~~~~~---~~~~~~~~~L~~~GI 339 (416)
T PRK00011 277 LEPEFKEYAQQVVKNAKALAEALAER-------GFRVVSGGT-------DNHLVLVDLRSKG---LTGKEAEAALEEANI 339 (416)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhC-------CCeeeecCC-------CCeEEEEeCcccC---CCHHHHHHHHHHcCc
Confidence 44567889999999999999999886 577653111 2588888875321 233458889999999
Q ss_pred eeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC----CCCHHHHHHHHHhhhhhhhh
Q 010538 427 QLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY----MSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 427 ~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~t~eev~~l~~~~~~~~~~ 501 (508)
.++.+....... ....+..+|++... ..|.+|+++++++|++++.-
T Consensus 340 ~v~~~~~p~~~~-----------------------------~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 340 TVNKNAVPFDPR-----------------------------SPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred EEccCcCCCCCC-----------------------------CCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 998643211100 00124569997643 35799999999999987654
No 71
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=2.7e-25 Score=232.75 Aligned_cols=319 Identities=13% Similarity=0.078 Sum_probs=228.4
Q ss_pred CHHHHHHHHHHhhccccCCCC--CccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCe
Q 010538 53 SELQMEAIFRDFTTNVYGNPH--SQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSS 130 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~ 130 (508)
+|.+++++.+.+ ..+..+++ +.+..+ .....++++.+|+++|++ .+++++|+++|+++++.++ ..+|+.
T Consensus 70 ~p~v~~a~~~~~-~~~~~~~~~s~~~~~~---~~~~~~le~~la~~~g~~----~~~~~~sG~~An~~~l~~l-~~~g~~ 140 (407)
T PRK07179 70 HPDIIKAQIAAL-QEEGDSLVMSAVFLHD---DSPKPQFEKKLAAFTGFE----SCLLCQSGWAANVGLLQTI-ADPNTP 140 (407)
T ss_pred CHHHHHHHHHHH-HHhCCCCCccccccCC---chHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHh-CCCCCE
Confidence 677888876654 33333442 222222 234567778999999985 3578999999999999998 567899
Q ss_pred EEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC
Q 010538 131 YMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE 210 (508)
Q Consensus 131 vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~ 210 (508)
|+++..+|+++....+ ..|+++..++. . |++.++ +++++ ..+++|+++++
T Consensus 141 v~~~~~~h~s~~~~~~---~~g~~~~~~~~-----~---------------d~~~l~--~~l~~-----~~~~lV~v~~v 190 (407)
T PRK07179 141 VYIDFFAHMSLWEGVR---AAGAQAHPFRH-----N---------------DVDHLR--RQIER-----HGPGIIVVDSV 190 (407)
T ss_pred EEEECCcCHHHHHHHH---HCCCeEEEecC-----C---------------CHHHHH--HHHHh-----cCCeEEEECCC
Confidence 9999999988865443 35777665543 1 356666 44421 24689999999
Q ss_pred CCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC---------CCCCCCCCcEEEEeccccccCCC
Q 010538 211 CNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP---------PDLSKYPVDFVVMSFYKIFGYPT 281 (508)
Q Consensus 211 ~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~---------~d~~~~~~D~~~~S~~K~~g~P~ 281 (508)
+|+||.+.|+++|.++|++ +|+++|+|++|+.|... +++. .++|++++|+||++| +.
T Consensus 191 ~n~tG~i~pl~~I~~l~~~------------~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g-~~ 256 (407)
T PRK07179 191 YSTTGTIAPLADIVDIAEE------------FGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFA-GR 256 (407)
T ss_pred CCCCCccccHHHHHHHHHH------------cCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhh-cc
Confidence 9999999999999999998 89999999999876532 2222 247999999999999 54
Q ss_pred cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 010538 282 GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASL 361 (508)
Q Consensus 282 G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 361 (508)
+|++++++++++.+..... . ....+|++...++++.++++.+.. .+.+++++.++
T Consensus 257 -~G~l~~~~~~~~~~~~~~~---------------------~-~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~ 311 (407)
T PRK07179 257 -AGIITCPRELAEYVPFVSY---------------------P-AIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHAN 311 (407)
T ss_pred -CeEEEeCHHHHHHHHHhCc---------------------C-eeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 7999998887665432100 0 112466667777778888888754 36678999999
Q ss_pred HHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHh
Q 010538 362 GMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAK 441 (508)
Q Consensus 362 ~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~ 441 (508)
++++++.|+++ ++++.++ ++++++.++... +...+.+.|.++||.++ .+|.+..
T Consensus 312 ~~~l~~~L~~~-------g~~v~~~----------~~i~~l~~~~~~----~~~~~~~~L~~~GI~~~--~~~~p~~--- 365 (407)
T PRK07179 312 ARFLREGLSEL-------GYNIRSE----------SQIIALETGSER----NTEVLRDALEERNVFGA--VFCAPAT--- 365 (407)
T ss_pred HHHHHHHHHHc-------CCCCCCC----------CCEEEEEeCCHH----HHHHHHHHHHHCCceEe--eecCCCC---
Confidence 99999999886 4555421 678888764321 12347788899999854 2333321
Q ss_pred hcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 442 YLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 442 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
....+.+|||++.++|.+|+++++++|+++++..
T Consensus 366 ---------------------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 366 ---------------------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred ---------------------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 0125789999999999999999999999887653
No 72
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.95 E-value=4.5e-25 Score=227.26 Aligned_cols=327 Identities=13% Similarity=0.047 Sum_probs=229.8
Q ss_pred eCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcC
Q 010538 45 DHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFP 124 (508)
Q Consensus 45 d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~ 124 (508)
-+-+.+++|+.+++++.+. .+++ . ...+..+++++.+++++|++ ++++|+|+|+|+++++.++
T Consensus 18 t~~g~s~~~~~v~~a~~~~-~~~~--------~---~~~~~~~~~~~~~a~~~g~~----~~~~~~g~t~al~~al~al- 80 (363)
T TIGR01437 18 TILGVSTVSDEVADAQKRG-AQNY--------F---EIKELVNKTGEYIANLLGVE----DAVIVSSASAGIAQSVAAV- 80 (363)
T ss_pred ecCCCCCCCHHHHHHHHHH-HhcC--------C---CHHHHHHHHHHHHHHhhCCC----eEEEEcCHHHHHHHHHHHH-
Confidence 4455666899999887654 3321 1 13467889999999999975 5799999999999999998
Q ss_pred CCCCC---------------eEEEecccccchH-HHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhc
Q 010538 125 WSHQS---------------SYMYTMENHNSVL-GIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRK 188 (508)
Q Consensus 125 ~~~g~---------------~vl~~~~~h~s~~-~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~ 188 (508)
.++|+ +||++..+++.+. .+...+...|+++++++.+. .+ |+++++
T Consensus 81 ~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~--~~---------------d~~~le- 142 (363)
T TIGR01437 81 ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYAN--EC---------------SAEQLE- 142 (363)
T ss_pred hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCC--CC---------------CHHHHH-
Confidence 56676 8888775554442 22334555799999987642 23 688999
Q ss_pred CCCCCCCCCCCCCceEEE-EeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCc
Q 010538 189 GASFPERDPAGDAYNLFA-FPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVD 267 (508)
Q Consensus 189 ~~~l~~~~~~~~~t~lv~-~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D 267 (508)
+++ +++|++++ +++++|++|.+.|+++|.++||+ +|+++++|++|+.... .....++|
T Consensus 143 -~ai------~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~------------~gi~vivD~a~~~~~~--~~~~~g~D 201 (363)
T TIGR01437 143 -AAI------TEKTAAILYIKSHHCVQKSMLSVEDAAQVAQE------------HNLPLIVDAAAEEDLQ--KYYRLGAD 201 (363)
T ss_pred -Hhc------ChhceEEEEEecCCCCcCCcCCHHHHHHHHHH------------cCCeEEEECCCCCchH--HHHHcCCC
Confidence 555 57778665 56778999999999999999998 9999999999973210 11245789
Q ss_pred EEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN 347 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 347 (508)
++++|+||++++|. .|+++.+++.++.+++...+. .+.++.|+ ..++++.++++++.
T Consensus 202 ~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~~-------------------~~~~~~~~---~~~~gl~aAl~~~~ 258 (363)
T TIGR01437 202 LVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKGI-------------------GRAMKVGK---ENILGLTAALEQYL 258 (363)
T ss_pred EEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCCC-------------------cceeccCH---HHHHHHHHHHHHHH
Confidence 99999999777798 699998888877665443322 22233444 33788888999888
Q ss_pred hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC--
Q 010538 348 SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG-- 425 (508)
Q Consensus 348 ~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g-- 425 (508)
+.+.+.+.++.. .++++.+.|.++ ++++++.+..... ...-...+.|.... ..++..++.+.|.++|
T Consensus 259 ~~~~~~~~~~~~-~~~~l~~~L~~i------~g~~~~~~~~~~~-~~~~~~~v~~~~~~---~g~~~~~l~~~L~~~~~~ 327 (363)
T TIGR01437 259 STGKESGAEMVA-KLTPFIEALNTL------KGVSASIVQDEAG-RDIARAEIRFDESE---LGMTAADVVQALRQGEPA 327 (363)
T ss_pred ccCcccHHHHHH-HHHHHHHHHhcC------CCeEEEEecCCCC-CcCceEEEEEeccC---CCCCHHHHHHHHhcCCCC
Confidence 777777766655 466899999988 4788875432100 00001334444421 1145667999998877
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
|.++. ++ ...+.+|+++.. ++++|++.++++|++++
T Consensus 328 I~~r~--~~-----------------------------------~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 328 IYTRG--YK-----------------------------------ANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred EEEee--ee-----------------------------------ecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 55554 10 126789999996 56999999999998763
No 73
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=226.62 Aligned_cols=340 Identities=11% Similarity=0.031 Sum_probs=226.8
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC---CCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS---MKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~---~~~~~i~~t~g~t~ 114 (508)
++.++|+.+.... +++.+.+++.+ ++... + ...|........+.+++++.+++.+|++ ++ +|++|+|+++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~-~~~~~--~-~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~--~i~~t~G~~~ 100 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNN-FLANP--E-NHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQ--AIVVTAGSNM 100 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHH-HHhCC--C-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--eEEEeCChHH
Confidence 5789999887654 55556555533 33211 1 1123333334567788889999998974 45 7999999999
Q ss_pred HHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 115 ALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 115 al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
++..++.++ ..+|++|++++..|+.+... ++..|++++.+|.+.+..+ |++.++ +++
T Consensus 101 ~l~~~~~~~-~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~i-- 157 (389)
T PRK05957 101 AFMNAILAI-TDPGDEIILNTPYYFNHEMA---ITMAGCQPILVPTDDNYQL---------------QPEAIE--QAI-- 157 (389)
T ss_pred HHHHHHHHh-cCCCCEEEEeCCCCcCHHHH---HHhcCCEEEEeecCCCCCc---------------CHHHHH--Hhc--
Confidence 999999888 67899999998777665433 4457999999998755445 688898 555
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHH---HHHHHHcCCccccccCCCCCCCeEEEEeccccCCC------CC-CCC-CC
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLD---LINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT------QP-PDL-SK 263 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~---~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~------~~-~d~-~~ 263 (508)
++++++|++++++||||.++|.+ +|.++|++ +|+++++|+++..-. .+ ..+ ..
T Consensus 158 ----~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~------------~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 221 (389)
T PRK05957 158 ----TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAE------------HGIYHISDEAYEYFTYDGVKHFSPGSIPGS 221 (389)
T ss_pred ----CcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHH------------cCcEEEEeccchhccCCCCCccChhhCCCc
Confidence 45789999999999999999954 55555555 999999999976211 11 111 11
Q ss_pred CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 264 YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 264 ~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
....+++.|++|.+| ++| +||+++++++++++..... ....+++.+. ..++..
T Consensus 222 ~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~-q~~~~~ 276 (389)
T PRK05957 222 GNHTISLYSLSKAYG-FASWRIGYMVIPIHLLEAIKKIQD-----------------------TILICPPVVS-QYAALG 276 (389)
T ss_pred cCcEEEEecchhhcc-CccceeEEEecCHHHHHHHHHHHh-----------------------hcccCCCcHH-HHHHHH
Confidence 123488899999998 668 9999999988877664311 0111222222 222222
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL 420 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 420 (508)
+++.- ...+++..+++.+.++++.+.|++++ ++ .+..+.+ +.++|++++.. ++..++.+.
T Consensus 277 ~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~~~~g--------g~~~~~~~~~~----~~~~~~~~~ 337 (389)
T PRK05957 277 ALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQ------DRCTLHPANG--------AFYCFLKVNTD----LNDFELVKQ 337 (389)
T ss_pred HHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcC------CCccccCCCe--------eEEEEEeCCCC----CChHHHHHH
Confidence 33210 01146666778888999999998763 33 3333322 67888887542 233456667
Q ss_pred H-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 421 A-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 421 L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
| +++||.+.+|..|... .++++|||++.. +.++++..++.|.+++
T Consensus 338 l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~~~-~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 338 LIREYRVAVIPGTTFGMK---------------------------------NGCYLRIAYGAL-QKATAKEGIERLVQGL 383 (389)
T ss_pred HHHHCCEEEccchhhCCC---------------------------------CCCEEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 6 5689999999765321 146899999864 5777788777777665
Q ss_pred hh
Q 010538 500 NF 501 (508)
Q Consensus 500 ~~ 501 (508)
+.
T Consensus 384 ~~ 385 (389)
T PRK05957 384 KT 385 (389)
T ss_pred Hh
Confidence 43
No 74
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.9e-25 Score=226.14 Aligned_cols=324 Identities=14% Similarity=0.102 Sum_probs=229.3
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
++.++|+.+.... +++.+++++.+.+... ....|+. . ...++|+.+|++++.++++ +|++|+|+++++.
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~-~----~~~~lr~~ia~~~~~~~~~-~I~~t~G~~~~i~ 95 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEV----ALNRYPD-P----RAAALKAALRAAMGVPAGA-DVLLGNGSDELIQ 95 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhcc----ccccCCC-C----CHHHHHHHHHHHhCcCCCC-cEEEcCCHHHHHH
Confidence 4799999887654 5666777665433211 1112221 1 1467899999999987532 7999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++.++ ..+|++|+++.. ++..+...++..|++++.+|++++..+ |+++++ +++.
T Consensus 96 ~~~~~~-~~~gd~vlv~~P---~y~~~~~~~~~~g~~~~~i~~~~~~~~---------------d~~~l~--~~~~---- 150 (356)
T PRK04870 96 LLALAC-AKPGATVLAPEP---GFVMYRMSAKLAGLEFVGVPLTADFTL---------------DLPAML--AAIA---- 150 (356)
T ss_pred HHHHHh-cCCCCEEEECCC---CHHHHHHHHHHcCCEEEEecCCCCCCC---------------CHHHHH--HHhh----
Confidence 999988 578999998874 444555566678999999998755445 678888 5552
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCCC--CCCCCCCCcEEEEecc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQP--PDLSKYPVDFVVMSFY 274 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~~--~d~~~~~~D~~~~S~~ 274 (508)
.+++++|++++++||||.++|.+++.++++. | ++++|+|+++.. .... ..+...+..+++.|++
T Consensus 151 -~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~---------~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~S 217 (356)
T PRK04870 151 -EHRPALVFLAYPNNPTGNLFDDADVERIIEA---------A---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVS 217 (356)
T ss_pred -cCCCCEEEEcCCCCCCCCCCCHHHHHHHHHH---------C---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecch
Confidence 2478999999999999999999999999994 3 778999998753 1111 1122223458899999
Q ss_pred ccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChH
Q 010538 275 KIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVP 352 (508)
Q Consensus 275 K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 352 (508)
| ++ .+| +|+++++++.++.+...... .+.+.....+...+++... .++
T Consensus 218 K-~~-~~GlRiG~~i~~~~~i~~~~~~~~~--------------------------~~~~~~~q~~a~~~l~~~~--~~~ 267 (356)
T PRK04870 218 K-LG-LAGLRLGYLAGHPAWIAELDKVRPP--------------------------YNVNVLTQATALFALEHVD--VLD 267 (356)
T ss_pred h-hh-hHHHhhhhhhCCHHHHHHHHHccCC--------------------------CcCCHHHHHHHHHHHhCHH--HHH
Confidence 9 77 557 89999999887766543211 1123333333444444322 257
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCC
Q 010538 353 AICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGC 432 (508)
Q Consensus 353 ~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~ 432 (508)
+..+++++.++++.+.|+++ +++.+. ++. ++++++++++ ..++.+.|.++||.|+++.
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~------~~~~~~-~~~--------~~~~~~~~~~-------~~~~~~~l~~~gI~v~~~~ 325 (356)
T PRK04870 268 AQAAQLRAERTRLAAALAAL------PGVTVF-PSA--------ANFILVRVPD-------AAAVFDGLKTRGVLVKNLS 325 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhC------CCcEEC-CCC--------CeEEEEECCC-------HHHHHHHHHHCCEEEEECC
Confidence 77888899999999999887 366654 332 6788888762 2347889999999999876
Q ss_pred CCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 433 FCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 433 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.+.. ...+++|||++ +.+++++++++|.++
T Consensus 326 ~f~~---------------------------------~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 326 GMHP---------------------------------LLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred CCCC---------------------------------CCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 4421 12578999999 899999999998865
No 75
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.94 E-value=3.8e-25 Score=248.70 Aligned_cols=343 Identities=15% Similarity=0.081 Sum_probs=251.1
Q ss_pred eeeeCCCCCCCCHHHH-HHHHHHhhccccC--CCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 42 VYLDHAGATLYSELQM-EAIFRDFTTNVYG--NPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 42 iyld~~~~~~~~~~~~-~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.|++.+......|.++ +.+.+. ..++. .|... ..+....+.+...+..+++++|+++. ++.++.++|.+.+.
T Consensus 79 ~~ig~G~y~~~~P~vi~~~i~~~--~~~~t~ytPyQ~-EisQG~Leal~~~Qt~la~LtG~~~a--naSl~d~aTAa~ea 153 (954)
T PRK05367 79 SYIGQGYYGTHTPPVILRNILEN--PAWYTAYTPYQP-EISQGRLEALLNFQTMVADLTGLEIA--NASLLDEATAAAEA 153 (954)
T ss_pred cccCCCCCCCcCcHHHHHHHHhC--cchhhccCCCCh-HHHHHHHHHHHHHHHHHHHHHCCChh--hccccccHHHHHHH
Confidence 4567676665666666 444331 01111 12211 12344566777899999999999998 89999999999999
Q ss_pred HHhhcCCCCC--CeEEEecccccchHHHHH-HHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 119 VGEAFPWSHQ--SSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 119 ~~~~l~~~~g--~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
++.++.++++ ++|++++.+||+....++ +++..|++|+.+|.+.+ + .
T Consensus 154 ~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~--------------------~-------- 203 (954)
T PRK05367 154 MALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--L--------------------D-------- 203 (954)
T ss_pred HHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--C--------------------C--------
Confidence 9988876664 899999999999876544 56778999999987431 1 1
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYK 275 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K 275 (508)
++++..+ +.+..|.+|.+.|+++|.+++|+ +|++++||+.+.......+..++|+||+++|+||
T Consensus 204 ---~~~~~~v-lvq~p~~~G~i~d~~~i~~~ah~------------~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qk 267 (954)
T PRK05367 204 ---HDDVFGV-LLQYPGTSGEVRDYTALIAAAHA------------RGALVAVAADLLALTLLTPPGEMGADIAVGSAQR 267 (954)
T ss_pred ---cccEEEE-EEecCCCCeeeccHHHHHHHHHH------------cCCEEEEEehhhhccCCCChhhcCCCEEEeeCcc
Confidence 1234444 44557899999999999999998 8999999998865555567899999999999999
Q ss_pred c-----ccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHH-----HHH
Q 010538 276 I-----FGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHG-----FNL 345 (508)
Q Consensus 276 ~-----~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~a-----l~~ 345 (508)
| |||| |.|++++++++...+.+.+.|+...........+......+..+++.+|.|+....++.+. +.+
T Consensus 268 fg~P~g~GGP-~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~ 346 (954)
T PRK05367 268 FGVPMGFGGP-HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVY 346 (954)
T ss_pred cCCCCCCCCC-CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 9 7777 6999999999988888787776321111111111111223456889999998754333333 356
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
+...|++++.+++..++.++++.|++. |+++..+.. ...+.++++. +..++.+.|.++|
T Consensus 347 ~g~~Gl~~Ia~~~~~la~~l~~~L~~~-------G~~~~~~~~--------f~~~~~~~~~------~~~~i~~~l~~~g 405 (954)
T PRK05367 347 HGPEGLKAIARRVHRLAAILAAGLRAL-------GLEVVHDSF--------FDTLTVEVGG------DAAAVLARALAAG 405 (954)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhc-------CcccCCCCC--------CCeEEEeCCC------CHHHHHHHHHHCC
Confidence 778899999999999999999999774 677765532 4677777531 2346899999999
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
|.++.- .++.+|+|++.++|.+||+++++++.
T Consensus 406 i~~~~~---------------------------------------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 406 INLRRV---------------------------------------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ceeccc---------------------------------------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 997431 14679999999999999999999986
No 76
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=9.1e-25 Score=225.60 Aligned_cols=335 Identities=16% Similarity=0.158 Sum_probs=230.0
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCC-CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGA-TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD 103 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~ 103 (508)
.+..... +.+ . .+.+.|..+.. ..+++.+.+++.+.. .... .|.... ...+|+.+|+++|++++
T Consensus 21 ~~~~~~~-~~~-~-~~~i~l~~~~~~~~~~~~~~~a~~~~~-~~~~-----~y~~~~-----~~~lr~~ia~~~~~~~~- 85 (367)
T PRK02731 21 PIEELVR-EYG-I-ADIIKLASNENPLGPSPKAIEAIRAAA-DELH-----RYPDGS-----GFELKAALAEKFGVDPE- 85 (367)
T ss_pred CHHHHHH-hcC-C-CceEEecCCCCCCCCCHHHHHHHHHHH-Hhhc-----CCCCCc-----HHHHHHHHHHHhCcCHH-
Confidence 4444444 443 2 56777776632 224666666654432 2211 121111 25789999999999888
Q ss_pred ceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccch
Q 010538 104 YKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 104 ~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
+|++|+|+++++++++.++ .++|+.|+++...|+.+ ...+...|++++.+|.++ ..+ |+
T Consensus 86 -~i~~t~G~~~~l~~~~~~l-~~~gd~vl~~~p~y~~~---~~~~~~~g~~~~~~~~~~-~~~---------------~~ 144 (367)
T PRK02731 86 -RIILGNGSDEILELLARAY-LGPGDEVIYSEHGFAVY---PIAAQAVGAKPVEVPAKD-YGH---------------DL 144 (367)
T ss_pred -HEEEcCCHHHHHHHHHHHh-cCCCCEEEEecCCHHHH---HHHHHHcCCeEEEecccC-CCC---------------CH
Confidence 8999999999999999988 67899999887666433 333456799999998843 333 57
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC----C-
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ----P- 258 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~----~- 258 (508)
++++ +.+ ++++++|++++++||||.++|.+++.++++. ++ +|+++++|+++..... .
T Consensus 145 ~~l~--~~~------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~---------~~-~~~~li~De~y~~~~~~~~~~~ 206 (367)
T PRK02731 145 DAML--AAV------TPRTRLVFIANPNNPTGTYLPAEEVERFLAG---------VP-PDVLVVLDEAYAEYVRRKDYED 206 (367)
T ss_pred HHHH--HHh------CCCCcEEEEeCCCCCCCcCCCHHHHHHHHHh---------CC-CCcEEEEECcHHHhccCcCccc
Confidence 7888 554 3578999999999999999999999999985 33 4999999999764221 1
Q ss_pred -CCCC-CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 259 -PDLS-KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 259 -~d~~-~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
++.. ..+..+++.|++|.|| ++| +||++++++.++.+...... + ..+..
T Consensus 207 ~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l~~~~~~~~~l~~~~~~-----------------------~---~~~~~ 259 (367)
T PRK02731 207 GLELVAKFPNVVVTRTFSKAYG-LAGLRVGYGIAPPEIIDALNRVRQP-----------------------F---NVNSL 259 (367)
T ss_pred HHHHHhhcCCEEEEeeehHhhc-CcccceeeeeCCHHHHHHHHHccCC-----------------------C---CCCHH
Confidence 1111 1123477889999988 546 69999999887766543100 1 11223
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
...++..+++. ...++++.++++++++++.+.|++. ++.+. ++. ++++++++++. .+.
T Consensus 260 ~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~-~~~--------g~~~~i~~~~~----~~~ 317 (367)
T PRK02731 260 ALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-------GLEYI-PSV--------GNFILVDFDDG----KDA 317 (367)
T ss_pred HHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-------CCccC-CCC--------ceEEEEECCCC----CCH
Confidence 33333333331 1235778888889999999999876 45554 322 78999988432 234
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
.++.+.|.++||.++++..+. .++++|+|++ +.+|+++++++
T Consensus 318 ~~~~~~L~~~gI~v~~~~~~~-----------------------------------~~~~iRis~~---~~~e~~~l~~a 359 (367)
T PRK02731 318 AEAYQALLKRGVIVRPVAGYG-----------------------------------LPNALRITIG---TEEENRRFLAA 359 (367)
T ss_pred HHHHHHHHHCCEEEEeCCCCC-----------------------------------CCCeEEEecC---CHHHHHHHHHH
Confidence 568889989999999875321 1478999997 89999999999
Q ss_pred hhhhhh
Q 010538 495 SFDFVN 500 (508)
Q Consensus 495 ~~~~~~ 500 (508)
|+++++
T Consensus 360 L~~~~~ 365 (367)
T PRK02731 360 LKEFLA 365 (367)
T ss_pred HHHHHh
Confidence 998764
No 77
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=1.1e-24 Score=227.14 Aligned_cols=329 Identities=13% Similarity=0.053 Sum_probs=223.9
Q ss_pred CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeE
Q 010538 52 YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSY 131 (508)
Q Consensus 52 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~v 131 (508)
.++.+.+++.+.+....+..+..... .....+.+++++.+++++|.+ + .|++|+| ++++..++.++ ..+|++|
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~~~~~--~G~~~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~v 129 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMASVRFI--CGTQDLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAI 129 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCcccccc--cCCcHHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEE
Confidence 46677776655442211111111111 123567788999999999976 4 6888888 67888888887 6889999
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSEC 211 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~ 211 (508)
++++..|+++....+. .|.++..++.. |++.++ +.+++......++++|+..++.
T Consensus 130 i~~~~~~~~~~~~~~~---~~~~~~~~~~~--------------------d~~~l~--~~i~~~~~~~~~~~~v~~~~v~ 184 (397)
T PRK06939 130 ISDALNHASIIDGVRL---CKAKRYRYANN--------------------DMADLE--AQLKEAKEAGARHKLIATDGVF 184 (397)
T ss_pred EEEhhhhHHHHHHHHh---cCCceEEeCCC--------------------CHHHHH--HHHHhhhccCCCCeEEEEecCc
Confidence 9999999988765544 47777776642 234444 3332110112378999999999
Q ss_pred CCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC------CCC--CCCcEEEEeccccccCCCcc
Q 010538 212 NFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD------LSK--YPVDFVVMSFYKIFGYPTGL 283 (508)
Q Consensus 212 n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d------~~~--~~~D~~~~S~~K~~g~P~G~ 283 (508)
|++|...++++|.++|++ +|+++|+|++|+.|....+ ... .++|++++|+||+++++. .
T Consensus 185 ~~~G~~~~~~~l~~la~~------------~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~ 251 (397)
T PRK06939 185 SMDGDIAPLPEICDLADK------------YDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-G 251 (397)
T ss_pred CCCCCcCCHHHHHHHHHH------------hCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-c
Confidence 999999999999999998 9999999999976543221 111 157899999999996465 5
Q ss_pred eEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 010538 284 GALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGM 363 (508)
Q Consensus 284 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 363 (508)
||+++++++++.+.+.... . ...++++....+++.++++++.. .+.+++++.++++
T Consensus 252 G~v~~~~~~~~~l~~~~~~---------------------~-~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~ 307 (397)
T PRK06939 252 GYTAGRKEVIDWLRQRSRP---------------------Y-LFSNSLAPAIVAASIKVLELLEE--SDELRDRLWENAR 307 (397)
T ss_pred eEEEeCHHHHHHHHHhCcc---------------------c-cccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHH
Confidence 9999998888776543100 0 11233444445666677887654 3678899999999
Q ss_pred HHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhc
Q 010538 364 YVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYL 443 (508)
Q Consensus 364 ~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~ 443 (508)
++.+.|+++ ++++..+. ++++.+.++.. .+..++.+.|.++||.+.++.++..+
T Consensus 308 ~l~~~L~~~-------~~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~L~~~gI~v~~~~~~~~~------ 361 (397)
T PRK06939 308 YFREGMTAA-------GFTLGPGE---------HPIIPVMLGDA----KLAQEFADRLLEEGVYVIGFSFPVVP------ 361 (397)
T ss_pred HHHHHHHHc-------CCCcCCCC---------CCEEEEEECCH----HHHHHHHHHHHHCCceEeeeCCCCCC------
Confidence 999999876 45443321 45555554321 12345788888889998854321111
Q ss_pred CCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 444 GLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 444 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
...+++|+++++++|.+|++++++.|+++++-
T Consensus 362 --------------------------~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 362 --------------------------KGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred --------------------------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 11468999999999999999999999988753
No 78
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=5.8e-25 Score=226.22 Aligned_cols=325 Identities=12% Similarity=0.056 Sum_probs=217.1
Q ss_pred CCCeeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
.+.+.|+.+... ++|+.+++++.+.. ... ..|+. .....+|+.+|++++++++ +|++|+|+++++.
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~-~~~-----~~y~~-----~~~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~ 86 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNL-DCA-----ERYPD-----VEYRHLHQALARHHQVPAS--WILAGNGETESIF 86 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHH-Hhc-----ccCcC-----ccHHHHHHHHHHHhCcChh--hEEECCCHHHHHH
Confidence 567889877544 45666777665433 211 11221 1257899999999999998 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++.++ .+|+.|+ .. |++..+...++..|++++.+|.+....++ +| +++. +.+
T Consensus 87 ~~~~~l--~~g~viv-~~---P~y~~~~~~~~~~g~~~~~v~~~~~~~~~-------------~~-~~~~--~~~----- 139 (356)
T PRK08056 87 AVVSGL--KPRRAMI-VT---PGFAEYRRALQQVGCEIRRYSLREADGWQ-------------LT-DAIL--EAL----- 139 (356)
T ss_pred HHHHHh--CCCCEEE-eC---CCcHHHHHHHHHcCCeEEEEecccccCCC-------------cc-HHHH--Hhc-----
Confidence 999887 4566544 43 45555556667789999999986432221 12 2344 222
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCC-CCCCCCcEEEEe
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPD-LSKYPVDFVVMS 272 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d-~~~~~~D~~~~S 272 (508)
.+++++|++++++||||.+++.+++.++++ +|++++++||+|+++.. +...++ +...+.++++.|
T Consensus 140 -~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S 209 (356)
T PRK08056 140 -TPDLDCLFLCTPNNPTGLLPERQLLQAIAE---------RCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRS 209 (356)
T ss_pred -cCCCCEEEEeCCcCCCCCCCCHHHHHHHHH---------HHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEe
Confidence 367899999999999999999665555544 34449999999999642 111111 233456799999
Q ss_pred ccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc
Q 010538 273 FYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL 349 (508)
Q Consensus 273 ~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 349 (508)
+||+|| .+| +||++++ ++.++.+.... ...+.+.....+...+++- ..
T Consensus 210 ~SK~~~-~~G~RiG~~v~~~~~~~~~l~~~~--------------------------~~~~~~~~~~~~a~~~l~~--~~ 260 (356)
T PRK08056 210 LTKFYA-IPGLRLGYLVNSDDAAVARMRRQQ--------------------------MPWSINAFAALAGEVILQD--RA 260 (356)
T ss_pred chhhcc-CcchhheeeecCCHHHHHHHHHhC--------------------------CCCchhHHHHHHHHHHhCC--HH
Confidence 999999 667 8999985 45555444321 0112222223333333321 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeec
Q 010538 350 TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLR 429 (508)
Q Consensus 350 g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 429 (508)
....+.+++++.++++.+.|++++ ++.+..+ . +++++++++.. . .++.+.|.++||.++
T Consensus 261 ~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~~-~--------~~~~~~~~~~~-~-----~~~~~~l~~~gI~v~ 319 (356)
T PRK08056 261 YQQATWQWLAEEGARFYQALCALP------LLTVWPG-R--------ANYLFLRCERP-D-----IDLQRALLTQRILIR 319 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC------CcEEcCC-C--------CcEEEEEcCCC-h-----HHHHHHHHHCCeEEE
Confidence 245667788889999999998873 5665533 2 68888887632 1 247788888999999
Q ss_pred cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 430 TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 430 ~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
+|..+... ..++||||++ +.++.++++++|++++
T Consensus 320 ~~~~f~~~---------------------------------~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 320 SCANYPGL---------------------------------DSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred ECCCCCCC---------------------------------CCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 98755221 2578999998 8999999999998764
No 79
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=4.9e-25 Score=227.39 Aligned_cols=327 Identities=13% Similarity=0.128 Sum_probs=229.7
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD 103 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~ 103 (508)
....++. .+.. ++.+.|+.+-... +++.+++++.+... .. ..|+. ....++|+.+|++++++++
T Consensus 18 ~~~~~~~-~~~~--~~~i~l~~nen~~~~~~~v~~a~~~~~~-~~-----~~Yp~-----~g~~~Lr~aia~~~~~~~~- 82 (366)
T PRK01533 18 SPEQMKE-VYGD--HSFVKLASNENPFGCSPRVLDELQKSWL-DH-----ALYPD-----GGATTLRQTIANKLHVKME- 82 (366)
T ss_pred ChHHHHH-hcCC--CceEEeCCCCCCCCCCHHHHHHHHHHHH-hc-----CcCCC-----CCHHHHHHHHHHHhCCCcc-
Confidence 3444554 4532 5789999877664 46667776654322 11 11211 1146689999999999998
Q ss_pred ceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccch
Q 010538 104 YKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 104 ~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
+|++|+|+++++.+++.++ .++|+.|+++...|+.+ ...++..|++++.||.+.. .+ |+
T Consensus 83 -~I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~P~y~~~---~~~~~~~g~~v~~v~~~~~-~~---------------d~ 141 (366)
T PRK01533 83 -QVLCGSGLDEVIQIISRAV-LKAGDNIVTAGATFPQY---RHHAIIEGCEVKEVALNNG-VY---------------DL 141 (366)
T ss_pred -eEEECCCHHHHHHHHHHHh-cCCCCEEEEcCCcHHHH---HHHHHHcCCEEEEeecCCC-Cc---------------CH
Confidence 9999999999999999998 67899999887555444 4455667999999998632 34 67
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC------C
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT------Q 257 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~------~ 257 (508)
++++ +++ .++++++++++++||||.+++.+++.++++ +|++++ ++|+|+++..-. .
T Consensus 142 ~~l~--~~~------~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~---------~~~~~~-~~iiDe~y~~~~~~~~~~~ 203 (366)
T PRK01533 142 DEIS--SVV------DNDTKIVWICNPNNPTGTYVNDRKLTQFIE---------GISENT-LIVIDEAYYEYVTAKDFPE 203 (366)
T ss_pred HHHH--HHh------CcCCcEEEEeCCCCCCCCCcCHHHHHHHHH---------hCCCCC-EEEEEccHHHhhccccCcc
Confidence 8888 544 456799999999999999999999999988 465556 577798875211 0
Q ss_pred CCC-CCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 258 PPD-LSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 258 ~~d-~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
.+. +...+..+++.|++|.|| .+| +||+++++++++.+.... .....+..
T Consensus 204 ~~~~~~~~~~vi~~~SfSK~~~-l~GlRiG~~i~~~~~~~~l~~~~--------------------------~~~~~~~~ 256 (366)
T PRK01533 204 TLPLLEKHKNILVLRTFSKAYG-LASFRVGYAVGHEELIEKLNVVR--------------------------LPFNVSSL 256 (366)
T ss_pred hhHHhccCCCEEEEeCchHHhc-ChHHHHhHHhCCHHHHHHHHHhc--------------------------CCCCcCHH
Confidence 111 112234588999999999 557 899999988877665431 11234444
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
...++.++++- ....+.+.+...+.++++.+.++.+ ++++..+. ++++++.+++ .
T Consensus 257 ~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-------g~~~~~~~---------~nf~~~~~~~--~----- 311 (366)
T PRK01533 257 AQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-------EIPFYQSQ---------TNFIFLPVEN--G----- 311 (366)
T ss_pred HHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-------CCccCCCc---------CcEEEEeCCC--H-----
Confidence 45555555532 1124556667777788888878775 56655442 7899998752 2
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
..+.+.|.++||.|+. | ++++|||++ +.+|.++|+++
T Consensus 312 ~~~~~~l~~~GI~Vr~---~-------------------------------------~~~iRis~~---~~~~~~~l~~a 348 (366)
T PRK01533 312 GEIYEACAHAGFIIRP---F-------------------------------------PNGVRITVG---TREQNEGVISV 348 (366)
T ss_pred HHHHHHHHHCCcEEcc---C-------------------------------------CCceEEeCC---CHHHHHHHHHH
Confidence 2478889999999986 2 357999999 99999999999
Q ss_pred hhhhhh
Q 010538 495 SFDFVN 500 (508)
Q Consensus 495 ~~~~~~ 500 (508)
|+++++
T Consensus 349 l~~~~~ 354 (366)
T PRK01533 349 LQQHFE 354 (366)
T ss_pred HHHHHH
Confidence 998764
No 80
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=1.8e-24 Score=224.78 Aligned_cols=336 Identities=13% Similarity=0.044 Sum_probs=218.8
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----CC--CCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----NA--SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~~i~~t~g 111 (508)
++.+.|+.+..... ++.+.+++.+.. ... ....|..... ...+|+.+++++ |. ++++ +|++|+|
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~Y~~~~G----~~~lr~~ia~~~~~~~~~~~~~~~-~vi~t~G 99 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAA-ENP---ENHRYPSYEG----MLAYRQAVADWYKRRFGVELDPET-EVLSLIG 99 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHH-hCC---CCCCCCCCCC----CHHHHHHHHHHHHHhhCCCCCCCC-eEEECCC
Confidence 56788887765543 444555544322 210 1112221111 234555555554 44 3431 5899999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++++.+++.++ .++|+.|+++...|+.+... ++..|.+++.+|.+.+..+ ..|+++++ +.
T Consensus 100 ~~~~l~~~~~~~-~~~gd~vlv~~P~y~~~~~~---~~~~G~~v~~v~~~~~~g~-------------~~d~~~l~--~~ 160 (383)
T TIGR03540 100 SKEGIAHIPLAF-VNPGDIVLVPDPGYPVYRIG---TLFAGGEPYEMPLKEENGF-------------LPDFDAIP--ED 160 (383)
T ss_pred cHHHHHHHHHHh-CCCCCEEEEeCCCCcchHHH---HHhcCCEEEEEecCcccCC-------------ccCHHHHH--hh
Confidence 999999999998 68899999999777766544 4456999999998643222 11577887 44
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC---
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY--- 264 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~--- 264 (508)
+ .+++++|++++++||||.++|.+++.++++ +|+++|+++|+|+++.. +..++++...
T Consensus 161 ~------~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~---------~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~ 225 (383)
T TIGR03540 161 I------AKKAKLMFINYPNNPTGAVAPLKFFKELVE---------FAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGA 225 (383)
T ss_pred c------cccceEEEEeCCCCCcCccCCHHHHHHHHH---------HHHHcCEEEEEecchhhhccCCCCCcCcccCCCc
Confidence 4 357899999999999999999766666655 45559999999999862 2233443222
Q ss_pred -CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 265 -PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 265 -~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
+..+++.|++|.|| ++| +||++.++++++.+..... ....++ +.+...++..
T Consensus 226 ~~~~i~~~SfSK~~g-~~GlRiG~~i~~~~l~~~~~~~~~-----------------------~~~~~~-~~~~q~~~~~ 280 (383)
T TIGR03540 226 KDVGIEFHSLSKTYN-MTGWRIGMAVGNADLIAGLGKVKT-----------------------NVDSGV-FQAIQYAAIA 280 (383)
T ss_pred ccCEEEEEecccccC-CccceeeEEeCCHHHHHHHHHHHH-----------------------hcccCC-ChHHHHHHHH
Confidence 34588899999998 668 8999999888776553310 011122 2222333333
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
+++-. ...++.+++++.+.++.+.+.|++. ++.+..+.+ +.++++.+++. ++..++...|
T Consensus 281 ~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~--------~~~~~~~l~~~----~~~~~~~~~l 340 (383)
T TIGR03540 281 ALNGP-QDVVKEIRKIYQRRRDLLLEALKKI-------GIDVEKPKA--------TFYVWVPVPEG----YTSAEFAARL 340 (383)
T ss_pred HHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-------CCEecCCCc--------ceEEEEECCCC----CCHHHHHHHH
Confidence 44321 1225667788888999999999886 577665543 56788888642 2334566654
Q ss_pred -hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 422 -SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 422 -~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
+++||.+++|..|... ..+++|||++. +.+++...++.|++
T Consensus 341 l~~~gi~v~~g~~f~~~---------------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 341 LEETGVVVTPGVGFGEY---------------------------------GEGYIRISLTV--PDERLEEAVARIKK 382 (383)
T ss_pred HHHCCEEEecchhhCcc---------------------------------CCCeEEEEecC--CHHHHHHHHHHHhh
Confidence 6789999998765321 25789999983 67787777777654
No 81
>PLN02483 serine palmitoyltransferase
Probab=99.94 E-value=2.2e-24 Score=229.95 Aligned_cols=309 Identities=15% Similarity=0.108 Sum_probs=216.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccC
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~ 161 (508)
.....+++++.+|+++|.+ + .|++++|.. ++..++.++ .++|+.|++++..|+++.... +..|++++.++.+
T Consensus 144 ~~~~~~ele~~lA~~~g~~-~--ai~~~~G~~-an~~~i~al-~~~Gd~Vi~d~~~h~s~~~~~---~~~Ga~v~~~~~~ 215 (489)
T PLN02483 144 TTKLHRELEELVARFVGKP-A--AIVFGMGYA-TNSTIIPAL-IGKGGLIISDSLNHNSIVNGA---RGSGATIRVFQHN 215 (489)
T ss_pred CcHHHHHHHHHHHHHhCCC-c--EEEECCHHH-HHHHHHHHh-CCCCCEEEEcchhhHHHHHHH---HHcCCeEEEEeCC
Confidence 4667889999999999964 3 588877654 555667777 688999999999999977654 4469999999865
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCC--CCCCCCce-EEEEeCCCCCCccccCHHHHHHHHcCCccccccCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPER--DPAGDAYN-LFAFPSECNFSGSRFNLDLINIMKKNPERILEISP 238 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~--~~~~~~t~-lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~ 238 (508)
....+ -+.++ +++... ....|..+ +|++..+.|++|.+.++++|.++|++
T Consensus 216 d~~~l----------------e~~l~--~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~--------- 268 (489)
T PLN02483 216 TPSHL----------------EEVLR--EQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKK--------- 268 (489)
T ss_pred CHHHH----------------HHHHH--hhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHH---------
Confidence 32111 11122 222110 00112235 66777788999999999999999998
Q ss_pred CCCCCeEEEEeccccCCCCC---------CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEec
Q 010538 239 FSKGRWMVLIDAAKGCVTQP---------PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAAS 309 (508)
Q Consensus 239 ~~~~g~~vivD~a~~~g~~~---------~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~ 309 (508)
+|+++++|++|+.|... .++...++|++++|++|.|| +.| |++++++++++.++....+.
T Consensus 269 ---~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~G-G~i~~~~~li~~l~~~~~~~------ 337 (489)
T PLN02483 269 ---YKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKRTCPAH------ 337 (489)
T ss_pred ---cCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcc-cCc-eEEEcCHHHHHHHHHhCccc------
Confidence 99999999999865432 23333468999999999999 777 99999999887776442110
Q ss_pred ccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc----ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEec
Q 010538 310 IADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL----TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYG 385 (508)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~ 385 (508)
...++.+.+.+.++.++++.+... ...+..++++++++++++.|+++ ++.+++
T Consensus 338 ----------------~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-------G~~v~~ 394 (489)
T PLN02483 338 ----------------LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-------GFEVLG 394 (489)
T ss_pred ----------------cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-------CCcccC
Confidence 112334445555666778766522 13455788999999999999987 566665
Q ss_pred CCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCcc
Q 010538 386 TYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDND 465 (508)
Q Consensus 386 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 465 (508)
+.. ++++++.+.... +...+.+.|.++||.+.+..++..+.
T Consensus 395 ~~~--------sp~~~l~l~~~~----~~~~~~~~Ll~~GI~v~~~~fp~~p~--------------------------- 435 (489)
T PLN02483 395 DND--------SPVMPIMLYNPA----KIPAFSRECLKQNVAVVVVGFPATPL--------------------------- 435 (489)
T ss_pred CCC--------CCEEEEEECCHH----HHHHHHHHHHHCCcEEeeeCCCCCCC---------------------------
Confidence 543 567777664321 12347778888999998643333221
Q ss_pred ccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 466 IIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 466 ~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
..+.+|++++..+|.||+++++++|+++.+.++
T Consensus 436 -----~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 436 -----LLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred -----CCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 146899999999999999999999999876654
No 82
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=2.8e-24 Score=223.49 Aligned_cols=336 Identities=14% Similarity=0.037 Sum_probs=218.0
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----CC--CCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----NA--SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~~i~~t~g 111 (508)
++.+.|+.+..... ++.+.+++ ....... ....|..... ...+|+++++++ |. ++++ +|++|+|
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~-~ii~t~G 101 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAM-CKAVEDP---ENHQYPSYEG----MLEFRKAVADWYKRRFGVELDPET-EVISLIG 101 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHH-HHHHhCC---CCCCCCCCCC----cHHHHHHHHHHHHHHhCCCCCCCC-cEEEccC
Confidence 56788887765543 44455544 3332211 0111221111 344556666655 54 4441 4889999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++++.+++.++ .++|+.|+++...|+.+... ++..|.+++.+|.+.+..+ .+|++.++ +.
T Consensus 102 ~~~~i~~~~~~~-~~~gd~Vl~~~P~y~~~~~~---~~~~g~~~~~v~~~~~~g~-------------~~d~~~l~--~~ 162 (385)
T PRK09276 102 SKEGIAHIPLAF-VNPGDVVLVPDPGYPVYKIG---TIFAGGEPYFMPLKEENGF-------------LPDLDAIP--ED 162 (385)
T ss_pred cHHHHHHHHHHh-CCCCCEEEEcCCCCcChHHH---HHHcCCEEEEEecCCCCCC-------------cCCHHHHH--Hh
Confidence 999999999998 68899999998777665544 4456999999998643222 12577777 44
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC---
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY--- 264 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~--- 264 (508)
+ .+++++|++++++||||.++|.+++.++++ +|+++|++||+|+++.. +..+.++...
T Consensus 163 ~------~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~---------~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 227 (385)
T PRK09276 163 V------AKKAKLMFINYPNNPTGAVADLEFFEEVVD---------FAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGA 227 (385)
T ss_pred c------cccceEEEEeCCCCCCCCCCCHHHHHHHHH---------HHHHCCcEEEEecchhheecCCCCCCChhccCCC
Confidence 3 457899999999999999999876666665 45559999999999863 2222332221
Q ss_pred -CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 265 -PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 265 -~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
+..+++.|++|.|| ++| +||+++++++++.+..... ....+.+.+...++..
T Consensus 228 ~~~~i~~~S~SK~~g-~~GlRiG~~i~~~~l~~~~~~~~~------------------------~~~~~~~~~~q~~~~~ 282 (385)
T PRK09276 228 KDVGIEFHSLSKTYN-MTGWRIGFAVGNADLIAGLGKVKS------------------------NVDSGVFQAIQEAGIA 282 (385)
T ss_pred cCCEEEEecchhhcC-CcchhheeeeCCHHHHHHHHHHHh------------------------hccCCCCHHHHHHHHH
Confidence 34588999999998 668 8999999888776654310 0011122223333333
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
+++.. ...++++++++.+.++++.+.|++. +++++.+.+ +.++++++++. ++..++.+.|
T Consensus 283 ~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~~--------~~~~~v~~~~~----~~~~~l~~~l 342 (385)
T PRK09276 283 ALNGP-QEVVEELRKIYQERRDILVEGLRKL-------GLEVEPPKA--------TFYVWAPVPKG----YTSAEFATLL 342 (385)
T ss_pred HHcCc-HHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCc--------ceEEEEECCCC----CCHHHHHHHH
Confidence 44311 1235677888888899999999876 566655432 56688887642 2344566665
Q ss_pred -hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 422 -SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 422 -~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
+++||.+++|..|... .++++|||++. +.+++...++.|.+
T Consensus 343 l~~~gi~v~~g~~f~~~---------------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (385)
T PRK09276 343 LDKAGVVVTPGNGFGEY---------------------------------GEGYFRIALTV--PDERIEEAVERIKK 384 (385)
T ss_pred HHhCCEEECCchhhCCC---------------------------------CCCeEEEEeCC--CHHHHHHHHHHHhh
Confidence 5689999998755321 15789999983 67777777776653
No 83
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=2.7e-24 Score=223.38 Aligned_cols=336 Identities=15% Similarity=0.062 Sum_probs=227.0
Q ss_pred CCeeeeCCC-CCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 40 GTVYLDHAG-ATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 40 ~~iyld~~~-~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
+++.|..+. .+. +++.+.+++.+.+.. ++.....+........+.+++++.+++++|.+ . .+++++| ++++.
T Consensus 34 ~~id~~~~~~~g~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~-~--~i~~~sG-~~a~~ 107 (385)
T TIGR01825 34 EVINLSSNNYLGFADHPRLKEAAAQAIQQ--YGVGAGAVRTIAGTLRLHEELEEKLAKFKKTE-A--ALVFQSG-FNTNQ 107 (385)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH--cCCCCCccCcccCCcHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHH
Confidence 344444332 244 577777776654432 11111122222224567888999999999974 4 5888877 55676
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
.++.++ ..+|++|+++...|+++...+.. .|+++..++. + |+++++ +.+.+ .
T Consensus 108 ~a~~~~-~~~gd~vi~~~~~~~~~~~~~~~---~g~~~~~~~~-----~---------------d~~~l~--~~l~~--~ 159 (385)
T TIGR01825 108 GVLSAL-LRKGDIVLSDELNHASIIDGLRL---TKATKKIYKH-----A---------------DMDDLD--RVLRE--N 159 (385)
T ss_pred HHHHHh-CCCCCEEEEEccccHHHHHHHHh---cCCceEEeCC-----C---------------CHHHHH--HHHHh--h
Confidence 777777 67899999998888887655443 4777665541 2 344455 33321 1
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC---------CCCCCCCCcE
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP---------PDLSKYPVDF 268 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~---------~d~~~~~~D~ 268 (508)
..+++++|++++++|+||.+.|+++|.++|++ +|+++|+|++|+.+..+ +++. .++|+
T Consensus 160 ~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~------------~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i 226 (385)
T TIGR01825 160 PSYGKKLIVTDGVFSMDGDVAPLPEIVELAER------------YGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDI 226 (385)
T ss_pred ccCCCeEEEEecCCcCCCCccCHHHHHHHHHH------------hCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcE
Confidence 23578999999999999999999999999998 99999999999765432 2333 46899
Q ss_pred EEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccccc-CCCCChhHHHHHHHHHHHHH
Q 010538 269 VVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE-DGTASFLSIASIRHGFNLIN 347 (508)
Q Consensus 269 ~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~ 347 (508)
++.|+||+++ +.| |+++.+++.++.+.... ..+. .++.+...++++.++++.+.
T Consensus 227 ~~~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~a~~~al~~~~ 281 (385)
T TIGR01825 227 QVGTLSKAIG-VVG-GYAAGHKELIEYLKNRA-----------------------RPFLFSTAQPPAVVAALAAAVDELQ 281 (385)
T ss_pred EEEeccHHhh-cCC-CEEecCHHHHHHHHHhC-----------------------ccccccCCCCHHHHHHHHHHHHHHh
Confidence 9999999998 556 88888888776654321 0011 12244556677777888765
Q ss_pred hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCe
Q 010538 348 SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQ 427 (508)
Q Consensus 348 ~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~ 427 (508)
+. .+..+++.++++++.+.|+++ ++++..+. ++++.+.++.. .+..++.+.|.++||.
T Consensus 282 ~~--~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~L~~~gi~ 339 (385)
T TIGR01825 282 RS--PELMERLWDNTRFFKAGLGKL-------GYDTGGSE---------TPITPVVIGDE----KAAQEFSRRLFDEGIF 339 (385)
T ss_pred cC--HHHHHHHHHHHHHHHHHHHHc-------CCCCCCCC---------CCEEEEEECCH----HHHHHHHHHHHHCCcE
Confidence 43 457788889999999999876 56665432 45666665321 1223577788778999
Q ss_pred eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 428 LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 428 v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
++++..+..+. ..+.+|+++++++|.+|++++++.++++++.
T Consensus 340 v~~~~~~~~~~--------------------------------~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 340 AQSIVFPTVPR--------------------------------GTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred EcccCCCCCCC--------------------------------CCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 86543221111 2468999999999999999999999987753
No 84
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.9e-25 Score=224.78 Aligned_cols=285 Identities=14% Similarity=0.087 Sum_probs=202.0
Q ss_pred HHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCC-CeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 87 RAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQ-SSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 87 ~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g-~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
.++++++++++|++++ +|++|+|+++++.+++.++ ..+| +.|+++...|+. ....++..|++++.+|.+.+..
T Consensus 60 ~~l~~~~a~~~g~~~~--~I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~P~y~~---y~~~~~~~G~~~~~v~~~~~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPE--QVLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYGM---YSVSAETIGVEIRTVPTLDNWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCCEEEEcCCCHHH---HHHHHHHcCCEEEEeecCCCCC
Confidence 5788999999999998 9999999999999999998 5665 889988755554 4445566799999999875444
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeE
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWM 245 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~ 245 (508)
+ |+++++ +++ +++++|++++++||||.+++.+++.++++. |++ +++
T Consensus 134 ~---------------d~~~l~--~~~-------~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~---------~~~-~~~ 179 (351)
T PRK01688 134 L---------------DLPAIA--DNL-------DGVKVVYVCSPNNPTGNLINPQDLRTLLEL---------TRG-KAI 179 (351)
T ss_pred C---------------CHHHHH--Hhc-------cCCcEEEEeCCCCCCCCCCCHHHHHHHHHh---------CCC-CcE
Confidence 4 678888 443 367999999999999999999999999883 444 688
Q ss_pred EEEeccccCCCCCCC---C-CCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhc
Q 010538 246 VLIDAAKGCVTQPPD---L-SKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 246 vivD~a~~~g~~~~d---~-~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
||+|+++..-....+ + ...+--+++.|++|+|| ++| +|+++++++.++.+......+
T Consensus 180 vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~g-laGlRiGy~i~~~~~i~~l~~~~~~~---------------- 242 (351)
T PRK01688 180 VVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFA-LAGLRCGFTLANEEVINLLLKVIAPY---------------- 242 (351)
T ss_pred EEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhc-CHHHHHhHHhCCHHHHHHHHhccCCC----------------
Confidence 999999853221111 1 12233478899999999 778 699999999887766442111
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCce
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (508)
..+.....+..++++.....-+++..+++.+.++++.+.|++++ +++.+.|+. +++
T Consensus 243 ----------~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~ps~--------~nf 298 (351)
T PRK01688 243 ----------PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIP------CVEQVFDSE--------TNY 298 (351)
T ss_pred ----------CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCeECCCC--------CcE
Confidence 12222222222233210001145556677778899999998873 554344443 788
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
+++++++ . .++.+.|.++||.|+.+..+.. .++++|||+
T Consensus 299 i~~~~~~--~-----~~l~~~L~~~gi~vr~~~~~~~----------------------------------~~~~iRis~ 337 (351)
T PRK01688 299 ILARFTA--S-----SAVFKSLWDQGIILRDQNKQPG----------------------------------LSNCLRITI 337 (351)
T ss_pred EEEEcCC--H-----HHHHHHHHHCCeEEEECCCcCC----------------------------------CCCeEEEeC
Confidence 8888752 1 3478888899999987532211 157899999
Q ss_pred CCCCCHHHHHHHHHhhh
Q 010538 480 GYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~~ 496 (508)
+ +.+|+++++++|+
T Consensus 338 ~---~~~e~~~l~~al~ 351 (351)
T PRK01688 338 G---TREECQRVIDALR 351 (351)
T ss_pred C---CHHHHHHHHHhhC
Confidence 9 8999999998863
No 85
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.2e-24 Score=220.27 Aligned_cols=322 Identities=15% Similarity=0.099 Sum_probs=222.7
Q ss_pred CCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 40 GTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 40 ~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
..+-|+.+.... +|+.+.+++.+ .+... .. ..|.. .....+|+.+|++++++++ +|++|+|+++++.+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~-~~~~~--~~-~~y~~-----~~~~~lr~~ia~~~~~~~~--~i~it~G~~~~l~~ 91 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQE-IVKSS--QV-NIYPD-----PTAEKLREELARYCSVVPT--NIFVGNGSDEIIHL 91 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHH-HhhcC--cc-cCCCC-----ccHHHHHHHHHHHhCCCcc--cEEEecCHHHHHHH
Confidence 456788777664 46667676543 33210 11 11211 1146789999999999988 89999999999999
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
++.++ .++|++|+++.. ++..+...++..|++++.++.+.+..+ |+++++ +++.
T Consensus 92 ~~~~l-~~~gd~Vlv~~p---~y~~~~~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~~~----- 145 (351)
T PRK14807 92 IMLAF-INKGDVVIYPHP---SFAMYSVYSKIAGAVEIPVKLKEDYTY---------------DVGSFI--KVIE----- 145 (351)
T ss_pred HHHHh-cCCCCEEEEeCC---ChHHHHHHHHHcCCeEEEeecCCCCCC---------------CHHHHH--HHhh-----
Confidence 99998 688999998764 444444555668999999998754444 577887 5542
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC--CCCCCC-CCCCCCcEEEEeccc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC--VTQPPD-LSKYPVDFVVMSFYK 275 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~--g~~~~d-~~~~~~D~~~~S~~K 275 (508)
..+++++++++++||||.++|.+++.+++++ ++.++|+|+++.. +....+ +...+..+++.|++|
T Consensus 146 ~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~------------~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK 213 (351)
T PRK14807 146 KYQPKLVFLCNPNNPTGSVIEREDIIKIIEK------------SRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSK 213 (351)
T ss_pred ccCCCEEEEeCCCCCCCCCCCHHHHHHHHHh------------CCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchH
Confidence 2378999999999999999999999999986 6778999999853 211111 122234588999999
Q ss_pred cccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHH
Q 010538 276 IFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPA 353 (508)
Q Consensus 276 ~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 353 (508)
.+| .+| +||++.+++.++.+..... ....+.....++..+++ +..+++
T Consensus 214 ~~~-~~GlRiG~~v~~~~~~~~~~~~~~--------------------------~~~~~~~~q~~~~~~l~---~~~~~~ 263 (351)
T PRK14807 214 AFG-LAGLRVGYAVANENILKYLNLVKS--------------------------PYNINSLSQVIALKVLR---TGVLKE 263 (351)
T ss_pred hcc-cchhceeeeecCHHHHHHHHHccC--------------------------CCCcCHHHHHHHHHHHh---HHHHHH
Confidence 998 557 8999998888776553210 01122233333333333 323566
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCC
Q 010538 354 ICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCF 433 (508)
Q Consensus 354 i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~ 433 (508)
..+++.+.++++.+.|+++ +++.+. ++. ++++++++++ ..++.+.|.++||.++.+..
T Consensus 264 ~~~~~~~~r~~l~~~l~~~------~g~~~~-~~~--------~~~~~i~~~~-------~~~~~~~l~~~gV~v~~~~~ 321 (351)
T PRK14807 264 RVNYILNERERLIKELSKI------PGIKVY-PSK--------TNFILVKFKD-------ADYVYQGLLERGILVRDFSK 321 (351)
T ss_pred HHHHHHHHHHHHHHHHHhC------CCcEEC-cCC--------ccEEEEEcCC-------HHHHHHHHHHCCEEEEECCC
Confidence 6677788888899999776 367654 332 6778888753 23478888889999976321
Q ss_pred CCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 434 CNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 434 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
. . ...+++|||++ +.++.+++++.|++++
T Consensus 322 ~-~---------------------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 322 V-E---------------------------------GLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred C-C---------------------------------CCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 0 0 01578999998 7899999999988753
No 86
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=226.58 Aligned_cols=348 Identities=13% Similarity=0.035 Sum_probs=247.7
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t~g~t~a 115 (508)
.+.+-|- ++...+++.+++++-..+ .+.| +.|+..|+.|....+.++. +.+.+.++||++.. +|-..+| +.|
T Consensus 49 ~~~l~Li-asEN~~s~~v~~a~~s~l-~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a--nvqp~Sg-~~A 123 (493)
T PRK13580 49 RSSLKLI-ASENYSSLAVQLAMGNLL-TDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHA--YVQPHSG-ADA 123 (493)
T ss_pred hcCceEe-cccccCCHHHHHHhcccc-cccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcc--cccCCCc-HHH
Confidence 5566665 667777999988875544 4444 5677777777666666665 88889999999887 5655444 558
Q ss_pred HHHHHhhcCCCC-------------------------------CCeEEEecccccchHH---HHHHHHhcCCeEEEEccC
Q 010538 116 LKLVGEAFPWSH-------------------------------QSSYMYTMENHNSVLG---IREYALSQGAAAFAIDVE 161 (508)
Q Consensus 116 l~~~~~~l~~~~-------------------------------g~~vl~~~~~h~s~~~---~~~~~~~~G~~v~~v~~~ 161 (508)
+..++.++. ++ ||+|+..+..|...+. ..... ....+++..+++
T Consensus 124 n~~v~~all-~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~-~~~~~~~~y~vd 201 (493)
T PRK13580 124 NLVAFWAIL-AHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNIS-GKMFHQRSYGVD 201 (493)
T ss_pred HHHHHHHHh-cccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchh-hheeeeEecccC
Confidence 888888883 32 7888887665543321 11111 112445555565
Q ss_pred C-ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 162 E-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 162 ~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
. .+.+ |.++++ +.+ .+.++.|++++.+|. |...|+++|.++|++
T Consensus 202 ~~~g~i---------------D~d~l~--~~~------~~~~plvii~g~S~~-~~~~dl~~i~eia~~----------- 246 (493)
T PRK13580 202 PDTGLL---------------DYDEIA--ALA------REFKPLILVAGYSAY-PRRVNFAKLREIADE----------- 246 (493)
T ss_pred cccCcc---------------CHHHHH--HHH------hhcCCEEEEeCcccc-CCCcCHHHHHHHHHH-----------
Confidence 3 3445 688888 444 567788999999888 558899999999998
Q ss_pred CCCeEEEEeccccCCCCCCCCC------CCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchh
Q 010538 241 KGRWMVLIDAAKGCVTQPPDLS------KYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADID 314 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~~~~d~~------~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 314 (508)
+|+++++|++|++|..+.+.. ..++||+++|+||++.||.| |++++++++++.+...
T Consensus 247 -~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~l~~~L~~a--------------- 309 (493)
T PRK13580 247 -VGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKEYADAVDKG--------------- 309 (493)
T ss_pred -cCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHHHHHHHhhC---------------
Confidence 999999999999998876552 12789999999998855987 9999999887766211
Q ss_pred hhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccC
Q 010538 315 FVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYH 394 (508)
Q Consensus 315 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~ 394 (508)
..+..|++..+.+++...++..+.+....++++++.+++++|++.|.+. |+.++...+.
T Consensus 310 ---------~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-------G~~vv~ggTd----- 368 (493)
T PRK13580 310 ---------CPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-------GARLVTGGTD----- 368 (493)
T ss_pred ---------CCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-------CCCccCCCCC-----
Confidence 1122345556678887778887765555778999999999999999987 7877643332
Q ss_pred CCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 395 DTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 395 ~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
++++.+.+.+.+ .....+.+.|.+.||.+..-..++.+.+ ......
T Consensus 369 --shIV~V~lg~~~---~~g~~a~~~L~e~GI~vn~i~~Ptvp~g-----------------------------~~~~sr 414 (493)
T PRK13580 369 --NHLVLIDVTSFG---LTGRQAESALLDAGIVTNRNSIPSDPNG-----------------------------AWYTSG 414 (493)
T ss_pred --CCEEEEEeCCHH---HHHHHHHHHHHHCCeEEccccCCCCCCC-----------------------------CCCCce
Confidence 799999986532 1223477899999999876544333221 012577
Q ss_pred EEEecCCCC----CHHHHHHHHHhhhhhhh
Q 010538 475 IRVSFGYMS----TFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 475 iRis~~~~~----t~eev~~l~~~~~~~~~ 500 (508)
|||+++.++ +++|++.++++|.+.++
T Consensus 415 LRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 415 IRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred EEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 999999855 59999999999988765
No 87
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=3.7e-24 Score=222.49 Aligned_cols=340 Identities=12% Similarity=0.055 Sum_probs=225.4
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC--C-CCceEEEcCChHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS--M-KDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~-~~~~i~~t~g~t~ 114 (508)
++.+.|+.+....+ ++.+.+++.+.. .. ....|........+.+++.+.+++++|++ + + +|++|+|+++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~-~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~--~i~it~g~~~ 101 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAM-RD----GHNQYAPMAGIAALREALAEKTERLYGARYDPAS--EVTVIASASE 101 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHH-Hh----CCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCC--cEEEECChHH
Confidence 56889988765544 444555543322 21 11223222224566677778888888874 3 4 6999999999
Q ss_pred HHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCccccccccccccccccchhhhhcCCCCC
Q 010538 115 ALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGLSESLVTSTKISLLPIQRRKGASFP 193 (508)
Q Consensus 115 al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~ 193 (508)
|+.+++.++ ..+|++|+++...|+.+..+.+ ..|.+++.+|++.+ ..+ |++.++ +++
T Consensus 102 al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~---------------d~~~l~--~~l- 159 (384)
T PRK12414 102 GLYAAISAL-VHPGDEVIYFEPSFDSYAPIVR---LQGATPVAIKLSPEDFRV---------------NWDEVA--AAI- 159 (384)
T ss_pred HHHHHHHHh-cCCCCEEEEeCCCccchHHHHH---HcCCEEEEEecCcccccc---------------CHHHHH--hhc-
Confidence 999999998 6889999999888877665544 35899999998642 233 678888 555
Q ss_pred CCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC----C
Q 010538 194 ERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY----P 265 (508)
Q Consensus 194 ~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~----~ 265 (508)
.+++++|++++++||||.+++.+++.++++ +|+++|+++++|+++.. +.....+... +
T Consensus 160 -----~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~---------~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 225 (384)
T PRK12414 160 -----TPRTRMIIVNTPHNPSATVFSAADLARLAQ---------LTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAE 225 (384)
T ss_pred -----CcccEEEEEcCCCCCCCcCCCHHHHHHHHH---------HHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccC
Confidence 357899999999999999998777666655 45559999999999863 2111122211 2
Q ss_pred CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
..+++.|++|.|| .+| +||+++++++++.+...... .....+.....++..++
T Consensus 226 ~~i~~~SfSK~~~-~pGlRiG~~v~~~~l~~~l~~~~~~------------------------~~~~~s~~~q~a~~~~l 280 (384)
T PRK12414 226 RSVIVSSFGKSYH-VTGWRVGYCLAPAELMDEIRKVHQF------------------------MVFSADTPMQHAFAEAL 280 (384)
T ss_pred cEEEEeccccccc-CccceEEEEecCHHHHHHHHHHHhh------------------------eecCCCcHHHHHHHHHh
Confidence 3489999999998 557 79999999887766543110 01122333333333343
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhh
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASL 423 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~ 423 (508)
+. ......+.+.+++.++++.+.|++. ++.+..+.+ +.++|++++..... .+...+.+.+.+
T Consensus 281 ~~--~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~g--------g~~~~~~~~~~~~~-~~~~~~~~~l~~ 342 (384)
T PRK12414 281 AE--PASYLGLGAFYQRKRDLLARELAGS-------RFELLPSEG--------SFFMLARFRHFSDE-SDSDFVLRLIRD 342 (384)
T ss_pred cC--ChHHHHHHHHHHHHHHHHHHHHHhC-------CCeecCCCc--------ceEEEEcccccCCC-CHHHHHHHHHHh
Confidence 31 1123456777888899999999876 566654432 56777777542110 112234467788
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
+||.+.+|..|.... ...+++|||++. ++++++..++.|.+
T Consensus 343 ~gV~v~pg~~f~~~~-------------------------------~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 343 ARVATIPLSAFYTDG-------------------------------TDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred CCEEEecchhhcCCC-------------------------------CCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 999999987653211 125789999995 68888888887764
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.94 E-value=3.5e-24 Score=219.94 Aligned_cols=295 Identities=12% Similarity=0.047 Sum_probs=200.5
Q ss_pred HHHHHHHHHHc----CC--CCCCceEEEcCChHHHHHHHHhhcCCCCC---CeEEEecccccchHHHHHHHHhcCCeEEE
Q 010538 87 RAAREQVLDYF----NA--SMKDYKCIFTSGATAALKLVGEAFPWSHQ---SSYMYTMENHNSVLGIREYALSQGAAAFA 157 (508)
Q Consensus 87 ~~~r~~la~~~----~~--~~~~~~i~~t~g~t~al~~~~~~l~~~~g---~~vl~~~~~h~s~~~~~~~~~~~G~~v~~ 157 (508)
..+|+.+++++ |. +++. +|++|+|+++++..++.++. .+| +.|+++...|+.+.... +..|++++.
T Consensus 39 ~~lr~aia~~~~~~~g~~~~~~~-~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~~~~~~---~~~g~~~~~ 113 (350)
T TIGR03537 39 KALREAISGWFERRFGVKLDPDA-QVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPVYERGA---LFAGGEPTA 113 (350)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcchHHHH---HhcCCEEEE
Confidence 34455555544 64 4431 69999999999999999884 444 69999987777665554 456999999
Q ss_pred EccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccC
Q 010538 158 IDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEIS 237 (508)
Q Consensus 158 v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~ 237 (508)
++++.+..+ +.|+++++ +++ .++++++++++++||||.++|.+++.++++
T Consensus 114 v~~~~~~~~-------------~~d~~~l~--~~~------~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~--------- 163 (350)
T TIGR03537 114 VKLKKEDGF-------------LLRLEKVE--KSI------LEETKIVWINYPHNPTGATAPRSYLKETIA--------- 163 (350)
T ss_pred cccCcccCC-------------ccCHHHHH--Hhh------hhccEEEEEeCCCCCcCcccCHHHHHHHHH---------
Confidence 998632221 11688888 554 356899999999999999999665555554
Q ss_pred CCCCCCeEEEEeccccC---CCCCCCCCCCC--CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecc
Q 010538 238 PFSKGRWMVLIDAAKGC---VTQPPDLSKYP--VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASI 310 (508)
Q Consensus 238 ~~~~~g~~vivD~a~~~---g~~~~d~~~~~--~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 310 (508)
+|+++|+++|+|++++. +..+.++...+ ..+++.|++|.+| .+| +|+++.++++.+.+.....
T Consensus 164 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~--------- 233 (350)
T TIGR03537 164 MCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSG-MTGYRSGFVAGDEKLISFLRKLRA--------- 233 (350)
T ss_pred HHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccC-CccccceeeecCHHHHHHHHHHHH---------
Confidence 34459999999999863 33333333222 3488889999998 447 8999988887766654311
Q ss_pred cchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCC
Q 010538 311 ADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSE 390 (508)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~ 390 (508)
.+..++++. ...++.+++.. ....+.++++++++++.+.+.|++. ++++..+.+
T Consensus 234 --------------~~~~~~~~~-~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-------g~~~~~~~g-- 287 (350)
T TIGR03537 234 --------------NFGVASPDF-VQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-------GLEYLYPDA-- 287 (350)
T ss_pred --------------hhccCCCHH-HHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe--
Confidence 111122222 22333333331 2235677888889999999999875 566554432
Q ss_pred cccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCC
Q 010538 391 VSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGK 470 (508)
Q Consensus 391 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 470 (508)
+.++++++++. ++..++.+.|.++||.+.+|..|...
T Consensus 288 ------~~~~~~~~~~~----~~~~~l~~~L~~~gv~v~~g~~f~~~--------------------------------- 324 (350)
T TIGR03537 288 ------TFYLWVKVPSG----IDAKDYALRLLENGIVVAPGENFGSG--------------------------------- 324 (350)
T ss_pred ------EEEEEEECCCC----CCHHHHHHHHHHCCEEEcCchhhCCC---------------------------------
Confidence 56788888653 23456888888899999998755321
Q ss_pred CCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 471 PTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 471 ~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
..+++|+|+. .+.++++..++.+++
T Consensus 325 ~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 325 EEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 2578999986 578999998888765
No 89
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.94 E-value=1.2e-24 Score=231.87 Aligned_cols=331 Identities=14% Similarity=0.078 Sum_probs=226.0
Q ss_pred ccchhhhhhHHHHHHHHHHHHHcCCCC-----------CCceEEEcCChHHHHHHHHhhcCC---C--------------
Q 010538 75 QSDISLATCDIVRAAREQVLDYFNASM-----------KDYKCIFTSGATAALKLVGEAFPW---S-------------- 126 (508)
Q Consensus 75 ~~~~~~~~~~~~~~~r~~la~~~~~~~-----------~~~~i~~t~g~t~al~~~~~~l~~---~-------------- 126 (508)
.+..++....+...+.++++++++..+ +...-+||+|+|+|+..++.+... .
T Consensus 120 ~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~ 199 (522)
T TIGR03799 120 KIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLF 199 (522)
T ss_pred eeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccch
Confidence 344556677888889999999986321 111468999999998765443211 0
Q ss_pred --------CCCeEEEecccccchHHHHHHHHhcCC---eEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 127 --------HQSSYMYTMENHNSVLGIREYALSQGA---AAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 127 --------~g~~vl~~~~~h~s~~~~~~~~~~~G~---~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
++.+|+++..+|+|+....+.+ |+ +++.||.+.++.+ |+++++ ++|++.
T Consensus 200 ~~~~~~~~~~~~v~~S~~~H~S~~kaa~~l---glg~~~v~~vp~d~~g~~---------------d~~~L~--~~i~~~ 259 (522)
T TIGR03799 200 AALKHYGYDGLAILVSERGHYSLGKAADVL---GIGRDNLIAIKTDANNRI---------------DVDALR--DKCAEL 259 (522)
T ss_pred hhhhhccCCceEEEECCCchHHHHHHHHHc---CCCcccEEEEEeCCCCcC---------------CHHHHH--HHHHHH
Confidence 2357999999999987665554 55 7999999888877 688888 666321
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC-----CCCC-CCcEE
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD-----LSKY-PVDFV 269 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d-----~~~~-~~D~~ 269 (508)
...+.++-.|+.++.++.||.+.|+++|.++|++ +|++++||++++.+....+ +... ++|++
T Consensus 260 ~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~------------~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSi 327 (522)
T TIGR03799 260 AEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQE------------LGCHFHVDAAWGGATLLSNTYRHLLKGIERADSV 327 (522)
T ss_pred HHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHH------------cCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEE
Confidence 1112223334445778899999999999999998 8999999999998776655 4544 79999
Q ss_pred EEeccccccCCCcceEEEEech-hHhhhccc--cc-cCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 270 VMSFYKIFGYPTGLGALIMRND-AAKLLKNT--YF-SGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 270 ~~S~~K~~g~P~G~G~l~~~~~-~~~~l~~~--~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
++|+|||+++|.|+|+++++++ ..+.+.+. +. ..+ ..+ ....+++ |+.+... ..++.++++
T Consensus 328 t~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~-------~~d------~~~~~le-gsR~~~a-l~lw~aL~~ 392 (522)
T TIGR03799 328 TIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKG-------SKD------LGSHTLE-GSRPGMA-MLVYAGLHI 392 (522)
T ss_pred EEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCC-------CCc------cccceee-cCcchHH-HHHHHHHHH
Confidence 9999998777999999999864 33334331 11 000 001 1134556 4444444 468999999
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC------------c--
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS------------W-- 411 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------~-- 411 (508)
+...|++.+.++..+++++|.+.|++. ++++++.++. .++|+|++...... +
T Consensus 393 lG~~G~~~ii~~~~~la~~l~~~L~~~------~~~el~~~p~--------l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~ 458 (522)
T TIGR03799 393 IGRKGYELLIDQSIEKAKYFADLIQQQ------PDFELVTEPE--------LCLLTYRYVPEEVQQALAKADEEQREKIN 458 (522)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhC------CCeEEecCCC--------ccEEEEEEeChhhcccccccchhhhhhHH
Confidence 999999999999999999999999987 4899998764 68999996431100 0
Q ss_pred --cCH--HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC-CCCCHH
Q 010538 412 --FGY--REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG-YMSTFE 486 (508)
Q Consensus 412 --~~~--~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~e 486 (508)
++. ..+.+.+.+.|...-+...-.+.. ..+.....+|+++. ..+|.+
T Consensus 459 ~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~----------------------------~~g~~~~~lR~~~~np~tt~~ 510 (522)
T TIGR03799 459 ELLDRLTKFIQKRQREAGKSFVSRTRLTPAQ----------------------------YDHQPTVVFRVVLANPLTTHE 510 (522)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEecccc----------------------------cCCCCcEEEEEEecCCCCCHH
Confidence 010 245566666666643321110000 00112357999985 778999
Q ss_pred HHHHHHHh
Q 010538 487 DAKVNRCS 494 (508)
Q Consensus 487 ev~~l~~~ 494 (508)
+|+.+++.
T Consensus 511 ~i~~~l~~ 518 (522)
T TIGR03799 511 ILQDILDE 518 (522)
T ss_pred HHHHHHHH
Confidence 99998764
No 90
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.93 E-value=8.2e-24 Score=214.52 Aligned_cols=349 Identities=15% Similarity=0.114 Sum_probs=247.5
Q ss_pred CeeeeCCCCCCCCHHHHHHHHHHhhccccC---CCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc-CChHHHH
Q 010538 41 TVYLDHAGATLYSELQMEAIFRDFTTNVYG---NPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT-SGATAAL 116 (508)
Q Consensus 41 ~iyld~~~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t-~g~t~al 116 (508)
...|. +|.+.+|++|++++.++++. +.+ ..-.....+....++++++++.+.++++++. +|+|+|. +|+|.++
T Consensus 5 ~~nF~-aGPa~lp~~Vl~~~~~~~~~-~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~-~y~Vlfl~GggT~~~ 81 (364)
T PRK12462 5 QLNFS-GGPGALPDTVLEQVRQAVVE-LPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPD-EYGVVFLQGGSSLQF 81 (364)
T ss_pred cceec-CCCcCCCHHHHHHHHHHHhc-ccccCccccccccccHHHHHHHHHHHHHHHHHhCCCC-CCeEEEEeccHHHHH
Confidence 34444 44556799999998877653 211 0111233456688999999999999999954 3677666 5599999
Q ss_pred HHHHhhcCCCCCCeEE-EecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 117 KLVGEAFPWSHQSSYM-YTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 117 ~~~~~~l~~~~g~~vl-~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
..+...+ ..+|+.++ +....+-+ ..|.+.+++.| .+..+..........+ +++++++
T Consensus 82 ea~~~Nl-l~~g~~~~~~~~tG~fg-~r~~~ea~~~g-~v~~~~~~~~~~~~~~-----------p~~~~~~-------- 139 (364)
T PRK12462 82 SMIPMNF-SRPGAAAPEYVTTGYWS-RKAIGEASRVA-AMRVVWDGAASGYRTL-----------PSLAELD-------- 139 (364)
T ss_pred HHHHHHc-CCCCCcEEEEEeCCHHH-HHHHHHHHhcC-CceEecCcCCCCCCcC-----------CCHHHhc--------
Confidence 9999998 56666443 22222211 23566677777 5655543221111110 1233343
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYK 275 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K 275 (508)
.+++.+.|.++|..+.||+.+| ++.+. +++++++|++.+++..|+|+.++ |+++++.+|
T Consensus 140 --~~~d~~~v~~t~NETstGv~~~-----~~~~~------------~~~llvvD~sS~~~s~pid~~~~--dvi~agsQK 198 (364)
T PRK12462 140 --WDARAPFRHYVSNETVEGLQFP-----DAAGL------------PDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQK 198 (364)
T ss_pred --cCCCCcEEEEccCCCCceEecC-----ccccc------------CCCeEEEEcCchhhCCCCChHHc--cEEEeeccc
Confidence 2346788999999999999998 33333 68999999999999999999986 999999999
Q ss_pred cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc--ChHH
Q 010538 276 IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL--TVPA 353 (508)
Q Consensus 276 ~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~--g~~~ 353 (508)
.+| |+|+++++++++++++..+.++ ...+|....+ .....-||++..++++..+++|+.+. |++.
T Consensus 199 nlg-P~Gltvvivs~~al~~~~~~~p---------~~ldy~~~~~---~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~ 265 (364)
T PRK12462 199 NLG-PAGVTVAIIRRALLERVPDTLP---------PMLDFRTHVE---HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHA 265 (364)
T ss_pred cCC-CCceEEEEECHHHHhhccccCC---------chhhHHHHHh---cCCCCCCchHHHHHHHHHHHHHHHHhccCHHH
Confidence 999 9999999999999887654321 1112222211 12233499999999999999999876 9999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEEEec-CCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCC
Q 010538 354 ICRHIASLGMYVRKVLLSLRHENGADVCTIYG-TYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGC 432 (508)
Q Consensus 354 i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~ 432 (508)
+.++.++.++.+++.+.+.. ++.... .+. .|+...|+|++.+.+ + ..++.+.++++|+.--.|+
T Consensus 266 ~~~r~~~ka~~ly~~id~~~------~~~~~~~~~~-----~RS~mnv~f~~~~~~---l-~~~f~~~a~~~gl~~lkGh 330 (364)
T PRK12462 266 MRDINARKAAMLYATLDALN------EVIDCHAHRA-----ARSTMNVAFRFRQPR---L-DTLFKEQSTEAGFCGLSGH 330 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCC------CcccCCCChh-----hcCcceEEEEcCCHH---H-HHHHHHHHHHCCCccccCC
Confidence 99999999999999999874 343222 222 345677888876532 1 2357888899999976654
Q ss_pred CCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 433 FCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 433 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+.-|.+|+|+-...+.|+|++|++.|++|-+
T Consensus 331 -------------------------------------r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 331 -------------------------------------RSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred -------------------------------------cccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 1256799999999999999999999999864
No 91
>PLN02263 serine decarboxylase
Probab=99.93 E-value=7.9e-24 Score=219.97 Aligned_cols=337 Identities=14% Similarity=0.037 Sum_probs=247.9
Q ss_pred CeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHH
Q 010538 41 TVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVG 120 (508)
Q Consensus 41 ~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~ 120 (508)
..+|.|..+.......+..++... .+..++|+...+.+..+.++..++.+++++++|.+++++.-++|+|+|+++..++
T Consensus 91 ~~~~gYp~n~~~d~s~l~~~l~~~-~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al 169 (470)
T PLN02263 91 KHHLGYPYNLDFDYGALGQLQHFS-INNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGI 169 (470)
T ss_pred cceeCCCCcccCChhhHHHHHHhh-ccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHH
Confidence 458888666665456666655533 3334556543222234677888899999999999875446899999999998776
Q ss_pred hhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCC
Q 010538 121 EAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAG 199 (508)
Q Consensus 121 ~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~ 199 (508)
.+.. ..++.++++++..|+|+....+++ |++++.||.+.++.+ |+++++ ++|.++ .
T Consensus 170 ~aARe~~~~~vvy~S~~aH~Sv~KAa~ll---gi~~~~Vp~d~~g~m---------------D~~aL~--~aI~~d---~ 226 (470)
T PLN02263 170 LVGREVFPDGILYASRESHYSVFKAARMY---RMECVKVDTLVSGEI---------------DCADFK--AKLLAN---K 226 (470)
T ss_pred HHHHhhcCCcEEEEcCCccHHHHHHHHhc---CCcceEeccCCCCcC---------------cHHHHH--HHHHhC---C
Confidence 6653 223458899999999998777664 899999999887777 688898 776432 2
Q ss_pred CCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC-----eEEEEeccccCCCCC-------CCCCCCCCc
Q 010538 200 DAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR-----WMVLIDAAKGCVTQP-------PDLSKYPVD 267 (508)
Q Consensus 200 ~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g-----~~vivD~a~~~g~~~-------~d~~~~~~D 267 (508)
.++.+|+.+.+++++|.+.|+++|.++|++ +| +|++||++.+....| +++.. .+|
T Consensus 227 ~~P~iVvataGTT~~GAiDpi~eIa~i~~~------------~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~-~vD 293 (470)
T PLN02263 227 DKPAIINVNIGTTVKGAVDDLDLVIKTLEE------------CGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKK-PIG 293 (470)
T ss_pred CCcEEEEEEecCCCCcCCCCHHHHHHHHHH------------cCCccCCeeEEEeccchhhHhhhcccccccCCCc-Ccc
Confidence 356888899999999999999999999997 66 599999998764443 44444 499
Q ss_pred EEEEeccccccCCCcceEEEEechhHhhhcc--ccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIMRNDAAKLLKN--TYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
.++.++|||++.|.++|+++++++....+.. .++.. ......|+.+....+.++.+++.
T Consensus 294 SIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~-------------------~d~ti~gSR~g~~al~lW~~L~~ 354 (470)
T PLN02263 294 SVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLAS-------------------RDATIMGSRNGHAPIFLWYTLNR 354 (470)
T ss_pred EEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCC-------------------CCCCcCCCCCcHHHHHHHHHHHH
Confidence 9999999998889999999999765433221 11111 11123466666667788889998
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
+...|+.++.+++.++++++.+.|++. ++..+..+. +++|.|..+.. ....+|
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~-------g~~~~~~p~--------s~~V~f~~p~~------------~~~~~g 407 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREA-------GISAMLNEL--------SSTVVFERPKD------------EEFVRR 407 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCeEEeCCC--------ceEEEEecCch------------HHhhcc
Confidence 888899999999999999999999987 566655443 67888875431 112356
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..+.+ .++.+|+.+....|.+.+|.+++-|++..+
T Consensus 408 W~L~~----------------------------------------~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 408 WQLAC----------------------------------------QGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred eEEcc----------------------------------------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 66543 135699999988899999999998886543
No 92
>PRK07337 aminotransferase; Validated
Probab=99.93 E-value=2.2e-24 Score=224.51 Aligned_cols=340 Identities=15% Similarity=0.086 Sum_probs=222.9
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C--CCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N--ASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~~i~~t~g 111 (508)
++.++|+.+.... +++.+.+++.+ .+.+ ....|... .....+|+.+|+++ | ++++ +|++|+|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~-~~~~----~~~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~t~G 98 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAAR-ALRR----GVTQYTSA----LGLAPLREAIAAWYARRFGLDVAPE--RIVVTAG 98 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHH-HHhc----CCCCCCCC----CCCHHHHHHHHHHHHHHhCCCCChH--hEEEecC
Confidence 6789999988664 35566666544 3321 11112211 11345666666665 4 4777 8999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc--CccccccccccccccccchhhhhcC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV--DNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~--~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
+++|+.+++.++ .++|++|+++...|+++..+. +..|++++.+|++.+. .+ |+++++
T Consensus 99 ~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~---------------~~~~l~-- 157 (388)
T PRK07337 99 ASAALLLACLAL-VERGDEVLMPDPSYPCNRHFV---AAAEGRPVLVPSGPAERFQL---------------TAADVE-- 157 (388)
T ss_pred cHHHHHHHHHHh-cCCCCEEEEeCCCchhhHHHH---HHcCCEEEEeecCCccCCcC---------------CHHHHH--
Confidence 999999999998 688999999998888765544 4468999999986432 33 688888
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCC--CCCCCCCCC
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQ--PPDLSKYPV 266 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~--~~d~~~~~~ 266 (508)
+.+ ++++++|++++++||||.+++.+++.++++ +|+++++++|+|+++.. ... +.+....+.
T Consensus 158 ~~~------~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 222 (388)
T PRK07337 158 AAW------GERTRGVLLASPSNPTGTSIAPDELRRIVE---------AVRARGGFTIVDEIYQGLSYDAAPVSALSLGD 222 (388)
T ss_pred hhc------CccceEEEEECCCCCCCcCcCHHHHHHHHH---------HHHHCCCEEEEeccccccccCCCCcChhhccC
Confidence 544 467899999999999999999776666665 45559999999998752 211 222222333
Q ss_pred c-EEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 267 D-FVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 267 D-~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
+ +++.|++|.|| .+| +||+++++++++.+......+ . ...+.....++..++
T Consensus 223 ~vi~~~S~SK~~~-~~G~RiG~~~~~~~l~~~l~~~~~~~-----------------------~-~~~s~~~q~~~~~~l 277 (388)
T PRK07337 223 DVITINSFSKYFN-MTGWRLGWLVVPEALVGTFEKLAQNL-----------------------F-ICASALAQHAALACF 277 (388)
T ss_pred CEEEEEechhhcC-CchhheeeeecCHHHHHHHHHHHHHh-----------------------c-cCCChHHHHHHHHHh
Confidence 4 56779999998 447 899999988876665431110 1 122333333333343
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe-cCCCCCcccCCCCceEEEEeeCCC-CCccCHHHHHH-H
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY-GTYTSEVSYHDTGSMVSFNLKRPD-GSWFGYREVEK-L 420 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~-~ 420 (508)
+.-....+.+.++++++.++++.+.|++. ++.+. .|.+ +.++|+++++.. ....+..++.. +
T Consensus 278 ~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-------~~~~~~~p~~--------g~f~~~~~~~~~~~~~~~~~~~~~~l 342 (388)
T PRK07337 278 EPDTLAIYERRRAEFKRRRDFIVPALESL-------GFKVPVMPDG--------AFYVYADCRGVAHPAAGDSAALTQAM 342 (388)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHhc-------CCccccCCCe--------eEEEEEecccccCCCCCCHHHHHHHH
Confidence 21000114566777888889999999875 34432 3332 789999986421 01123344554 4
Q ss_pred HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 421 ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 421 L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
++++||.+.+|..|.... ..+++|+|++. +.+++...++.|.+++
T Consensus 343 l~~~gv~v~pg~~f~~~~--------------------------------~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 343 LHDAGVVLVPGRDFGPHA--------------------------------PRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred HHhCCEEEeCchhhCCCC--------------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 678999999987653211 25799999995 5788888888877654
No 93
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.8e-24 Score=223.96 Aligned_cols=337 Identities=14% Similarity=0.102 Sum_probs=220.7
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~t~g 111 (508)
++.+.|+.+..... ++.+.+++ ....... ...|.... ...++|+.+|+++ +++++ +|++|+|
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~-~~~~~~~----~~~Y~~~~----g~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G 101 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAA-KRALDEG----WTHYTPNA----GIPELREAIAEYYKKFYGVDVDVD--NVIVTAG 101 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHH-HHHHhcC----CCCCCCCC----CcHHHHHHHHHHHHHHhCCCCCcc--cEEEeCC
Confidence 46788887765543 44444443 3332211 11121111 1345666666665 36677 8999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++|+.+++.++ ..+|+.|++++..|+++... ++..|++++.+|++.++.. ..|++.++ +.
T Consensus 102 ~~~al~~~~~~l-~~~g~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~-------------~~d~~~l~--~~ 162 (391)
T PRK08361 102 AYEATYLAFESL-LEEGDEVIIPDPAFVCYVED---AKIAEAKPIRIPLREENEF-------------QPDPDELL--EL 162 (391)
T ss_pred hHHHHHHHHHHh-cCCCCEEEEcCCCCcccHHH---HHHcCCEEEEEecCCccCC-------------CCCHHHHH--Hh
Confidence 999999999988 67899999998777776544 4446999999998754321 11688888 55
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCH---HHHHHHHcCCccccccCCCCCCCeEEEEeccccCC----CCCCCCCC-
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNL---DLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV----TQPPDLSK- 263 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i---~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g----~~~~d~~~- 263 (508)
+ .++++++++++++||||.++|. ++|.++|++ +++++|+|++++.. .....+..
T Consensus 163 i------~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~------------~~~~ii~De~y~~~~~~~~~~~~~~~~ 224 (391)
T PRK08361 163 I------TKRTRMIVINYPNNPTGATLDKEVAKAIADIAED------------YNIYILSDEPYEHFLYEGAKHYPMIKY 224 (391)
T ss_pred c------ccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHH------------cCeEEEEEcccccceeCCCCCCCHhhc
Confidence 4 4568999999999999999995 555555555 99999999998632 11222221
Q ss_pred -CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHH
Q 010538 264 -YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 264 -~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~ 340 (508)
.+.++++.|++|.|| ++| +|++++++++++.+..... ...++.+.....++.
T Consensus 225 ~~~~~i~~~s~SK~~~-~~GlRiG~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~q~~~~ 279 (391)
T PRK08361 225 APDNTILANSFSKTFA-MTGWRLGFVIAPEQVIKDMIKLHA------------------------YIIGNVASFVQIAGI 279 (391)
T ss_pred CCCCEEEEecCchhcC-CcHhhhhhhccCHHHHHHHHHHHh------------------------hhccCCChHHHHHHH
Confidence 245789999999998 558 8999999888766543210 011122222222223
Q ss_pred HHHHHHHh-cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHH
Q 010538 341 HGFNLINS-LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEK 419 (508)
Q Consensus 341 ~al~~~~~-~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 419 (508)
.+++.-.. ..++.+++++.+.++.+.+.|+++ +++++..+.+ +.++|+++++.. ++..++.+
T Consensus 280 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~~~~~~~p~g--------~~~~~~~l~~~~---~~~~~l~~ 342 (391)
T PRK08361 280 EALRSKESWKAVEEMRKEYNERRKLVLKRLKEM------PHIKVFEPKG--------AFYVFANIDETG---MSSEDFAE 342 (391)
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC------CCCeecCCCE--------EEEEEEECCCCC---CCHHHHHH
Confidence 33321000 136778888899999999999886 3677666543 567888886311 23345666
Q ss_pred HH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 420 LA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 420 ~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.| +++||.+.+|..|... ..+++||+++. +.++++..++.|+++
T Consensus 343 ~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~~~l~~al~~l~~~ 387 (391)
T PRK08361 343 WLLEKARVVVIPGTAFGKA---------------------------------GEGYIRISYAT--SKEKLIEAMERMEKA 387 (391)
T ss_pred HHHHhCCEEEcCchhhCCC---------------------------------CCCEEEEEecC--CHHHHHHHHHHHHHH
Confidence 65 5689999998754321 25789999994 677888888877766
Q ss_pred hh
Q 010538 499 VN 500 (508)
Q Consensus 499 ~~ 500 (508)
++
T Consensus 388 l~ 389 (391)
T PRK08361 388 LE 389 (391)
T ss_pred Hh
Confidence 54
No 94
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.93 E-value=8e-24 Score=215.79 Aligned_cols=325 Identities=17% Similarity=0.138 Sum_probs=237.5
Q ss_pred CCCeeeeCCCCCCCCH-HHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-CCCCCceEEEcCChHHHH
Q 010538 39 NGTVYLDHAGATLYSE-LQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN-ASMKDYKCIFTSGATAAL 116 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-~~~~~~~i~~t~g~t~al 116 (508)
++++.|+.+-....|+ .+.+++ ..........|.. ...+.++.++++++ .+++ .|+.++|+++.+
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~-~~~~~~~~rYPd~----------~~~~l~~a~a~~~~~~~~~--~V~~gnGsde~i 88 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAI-RAALDKLNRYPDP----------DYRELRAALAEYYGVVDPE--NVLVGNGSDELI 88 (356)
T ss_pred ccceeecCCCCCCCCCHHHHHHH-HHHHHhhccCCCC----------cHHHHHHHHHHHhCCCCcc--eEEEcCChHHHH
Confidence 4689999988776654 444443 3333222222322 25678999999999 7778 899999999999
Q ss_pred HHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCC
Q 010538 117 KLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERD 196 (508)
Q Consensus 117 ~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~ 196 (508)
.++++++ ..+|+.|+++...|+.+ ...++..|++++.+|..+ ..+ |++.+. +++
T Consensus 89 ~~l~~~~-~~~gd~vl~~~Ptf~~Y---~~~a~~~g~~~~~v~~~~-~~~---------------d~~~~~--~~~---- 142 (356)
T COG0079 89 ELLVRAF-VEPGDTVLIPEPTFSMY---EIAAQLAGAEVVKVPLKE-FRL---------------DLDAIL--AAI---- 142 (356)
T ss_pred HHHHHHh-hcCCCEEEEcCCChHHH---HHHHHhcCCeEEEecccc-ccc---------------CHHHHH--Hhh----
Confidence 9999999 67889999887555444 344556799999999876 444 567777 444
Q ss_pred CCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC--CCCCC-CCCcEEEEec
Q 010538 197 PAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP--PDLSK-YPVDFVVMSF 273 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~--~d~~~-~~~D~~~~S~ 273 (508)
.+++++|++++++||||..++.++|.+++.. +.+ +.+|++|+|+.--..+ +.+-. .+--++.-|+
T Consensus 143 --~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~---------~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTf 210 (356)
T COG0079 143 --RDKTKLVFLCNPNNPTGTLLPREELRALLEA---------LPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTF 210 (356)
T ss_pred --hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHh---------CCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEec
Confidence 3478999999999999999999999999995 444 8999999998642221 11111 1223778899
Q ss_pred cccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcCh
Q 010538 274 YKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTV 351 (508)
Q Consensus 274 ~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 351 (508)
+|.|| .+| +|++++++++++.+...... .+.|.++..+..++++.- ..+
T Consensus 211 SKa~g-LAGlRlGy~ia~~~~i~~l~~vr~p--------------------------~~v~~~a~~aa~aal~~~--~~~ 261 (356)
T COG0079 211 SKAFG-LAGLRVGYAIANPELIAALNKVRPP--------------------------FNVSSPALAAAIAALRDA--DYL 261 (356)
T ss_pred HHhhh-cchhceeeccCCHHHHHHHHHhcCC--------------------------CCCCHHHHHHHHHHcccH--HHH
Confidence 99999 667 89999999999887766322 234555566666565543 236
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 352 PAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 352 ~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
+...+++.+.++++.+.|+++ ++.-+.|+. .+++.+++++.+ ...+.+.|.++||.+|..
T Consensus 262 ~~~~~~~~~~r~rl~~~l~~~-------~~~~v~pS~--------aNFvlv~~~~~~-----~~~l~~~L~~~giivR~~ 321 (356)
T COG0079 262 EESVERIREERERLYAALKAL-------GLFGVFPSQ--------ANFVLVRVPDAE-----AAALAEALLKKGILVRDC 321 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-------CCCeecCCC--------CcEEEEECCCcc-----HHHHHHHHHHCCEEEEeC
Confidence 888899999999999999987 343233332 799999987622 124889999999999984
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.. .+ ..++++|||++ |.||.+++++++.++++
T Consensus 322 ~~--~~--------------------------------~~~~~lRitvg---t~een~~ll~AL~~~~~ 353 (356)
T COG0079 322 SS--VG--------------------------------LLPGYLRITVG---TPEENDRLLAALREVLK 353 (356)
T ss_pred CC--CC--------------------------------CCCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 32 11 12679999999 99999999999998765
No 95
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=2.2e-24 Score=219.97 Aligned_cols=298 Identities=17% Similarity=0.146 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHcCCC------CCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEc
Q 010538 86 VRAAREQVLDYFNAS------MKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAID 159 (508)
Q Consensus 86 ~~~~r~~la~~~~~~------~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~ 159 (508)
..++++.++++++.. ++ ++++++|+|+++..++.++ ..+|++|+++...|+++.... +..|.+++.++
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~--~~~~~~~~t~a~~~~~~~~-~~~g~~vl~~~~~~~~~~~~~---~~~~~~~~~i~ 111 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPE--EIVVTNGAQEALSLLLRAL-LNPGDEVLVPDPTYPGYEAAA---RLAGAEVVPVP 111 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHH---HHCCCEEEEEe
Confidence 444556666666543 55 7999999999999999998 577899999998888776554 44689999999
Q ss_pred cCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCC
Q 010538 160 VEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPF 239 (508)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~ 239 (508)
.+..+..+. +.+.++ . ..++++++|++++++|+||.++|++++.++++ +|
T Consensus 112 ~~~~~~~~~-------------~~~~~~--~------~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~---------~~ 161 (350)
T cd00609 112 LDEEGGFLL-------------DLELLE--A------AKTPKTKLLYLNNPNNPTGAVLSEEELEELAE---------LA 161 (350)
T ss_pred cccccCCcc-------------CHHHHH--h------hcCccceEEEEECCCCCCCcccCHHHHHHHHH---------HH
Confidence 876555421 113444 2 23578899999999999999999888875433 33
Q ss_pred CCCCeEEEEeccccCCCC----C---CCCCCCCCcEEEEecccccc-CCCcceEEEEec-hhHhhhccccccCceEEecc
Q 010538 240 SKGRWMVLIDAAKGCVTQ----P---PDLSKYPVDFVVMSFYKIFG-YPTGLGALIMRN-DAAKLLKNTYFSGGTVAASI 310 (508)
Q Consensus 240 ~~~g~~vivD~a~~~g~~----~---~d~~~~~~D~~~~S~~K~~g-~P~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~ 310 (508)
+++|+++++|++++.+.. + ......++|+++.|+||+++ ++.++|++++++ ++.+.+...
T Consensus 162 ~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~----------- 230 (350)
T cd00609 162 KKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKL----------- 230 (350)
T ss_pred HhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHH-----------
Confidence 349999999999976332 1 22445578999999999887 222489999998 666555432
Q ss_pred cchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCC
Q 010538 311 ADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSE 390 (508)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~ 390 (508)
.....++++.....++..+++... .+++.+++++.++++++.+.|++.. ...+..+
T Consensus 231 -------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~---- 286 (350)
T cd00609 231 -------------LPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELG------PLVVVKP---- 286 (350)
T ss_pred -------------HHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcC------CccccCC----
Confidence 111234566777777777777543 3578899999999999999999873 2222112
Q ss_pred cccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCC
Q 010538 391 VSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGK 470 (508)
Q Consensus 391 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 470 (508)
..+.++++.+++. .+...+.++|.++||.++.+..+...
T Consensus 287 ----~~g~~~~~~~~~~----~~~~~~~~~l~~~gi~i~~~~~~~~~--------------------------------- 325 (350)
T cd00609 287 ----SGGFFLWLDLPEG----DDEEFLERLLLEAGVVVRPGSAFGEG--------------------------------- 325 (350)
T ss_pred ----CccEEEEEecCCC----ChHHHHHHHHHhCCEEEecccccccC---------------------------------
Confidence 2377888887654 12345788888999999887544321
Q ss_pred CCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 471 PTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 471 ~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.+.++|++++.+ .+|+++++++|++
T Consensus 326 ~~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 326 GEGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred CCCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 257899999987 9999999998763
No 96
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.93 E-value=4.5e-24 Score=222.14 Aligned_cols=339 Identities=11% Similarity=0.016 Sum_probs=220.6
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C--CCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N--ASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~~i~~t~g 111 (508)
.+.+.|+.+....+ ++.+.+++.+..... ....|... .....+|+++|+++ | ++++. +|++|+|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~----~G~~~lr~aia~~~~~~~g~~~~~~~-~I~it~G 100 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDP----STHGYLLF----HGTLDFREAAAQWYEQRFGLAVDPET-EVLPLIG 100 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCc----ccCCCCCC----CCCHHHHHHHHHHHHHhhCCcCCCcC-eEEECCC
Confidence 56788887765544 555656654432111 01112211 11344566666665 4 55541 4999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++|+.+++.++ ..+|+.|++....|+.+... ++..|++++.+|++.++.. .+|+++++ +.
T Consensus 101 s~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~-------------~~d~~~l~--~~ 161 (388)
T PRK07366 101 SQEGTAHLPLAV-LNPGDFALLLDPGYPSHAGG---VYLAGGQIYPMPLRAENDF-------------LPVFADIP--TE 161 (388)
T ss_pred cHHHHHHHHHHh-CCCCCEEEEcCCCCcchHHH---HHhcCCEEEEEECCCccCC-------------CCCHHHHH--Hh
Confidence 999999999998 57899999888666666544 4456999999999754332 11566776 33
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCC-CCCCCCC--
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQ-PPDLSKY-- 264 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~-~~d~~~~-- 264 (508)
+ .++++++++++++||||.+++.+++.++++ +|+++|++||+|+++.. +.. ...+...
T Consensus 162 ~------~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~---------~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 226 (388)
T PRK07366 162 V------LAQARLMVLSYPHNPTTAIAPLSFFQEAVA---------FCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADP 226 (388)
T ss_pred h------cccceEEEEeCCCCCCCccCCHHHHHHHHH---------HHHHcCeEEEEecchhhcccCCCCCCCChhhCCC
Confidence 3 346799999999999999999998888776 56669999999999763 211 2222222
Q ss_pred --CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHH
Q 010538 265 --PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 265 --~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~ 340 (508)
..-+++.|++|.|| .+| +||+++++++++.+...... ...++.+..... +.
T Consensus 227 ~~~~vi~~~SfSK~~g-~~GlRiG~~v~~~~li~~l~~~~~~-----------------------~~~~~~~~~~~~-a~ 281 (388)
T PRK07366 227 EKSVSIEFFTLSKSYN-MGGFRIGFAIGNAQLIQALRQVKAV-----------------------VDFNQYRGILNG-AI 281 (388)
T ss_pred CcccEEEEeecccccC-CcchhheehcCCHHHHHHHHHHHhh-----------------------cccCCCHHHHHH-HH
Confidence 12377899999998 447 89999999888766543110 011121212222 22
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHH-
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEK- 419 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~- 419 (508)
+++.. .+..+++.++++++.++++.+.|++. ++.+..|.+ +.++|+++++.-. .+..++..
T Consensus 282 ~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-------~~~~~~p~~--------g~f~~~~~~~~~~--~~~~~~~~~ 343 (388)
T PRK07366 282 AALTG-PQATVQQTVQIFRQRRDAFINALHQI-------GWPVPLPEA--------TMYVWAKLPEPWQ--GNSVEFCTQ 343 (388)
T ss_pred HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe--------eEEEEEECCcccC--CCHHHHHHH
Confidence 23321 12236778888899999999999876 455444433 7899999875211 01233554
Q ss_pred HHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 420 LASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 420 ~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
+++++||.+++|..|... ..+++|||++. +.++++..++.|+++
T Consensus 344 l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 344 LVAQTGVAASPGSGFGKS---------------------------------GEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred HHHhCCEEEeCchHhCcC---------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 457889999998755221 25789999984 689999999888765
No 97
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=9.3e-24 Score=220.26 Aligned_cols=308 Identities=11% Similarity=0.045 Sum_probs=201.0
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C--CCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N--ASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~~i~~t~g 111 (508)
++.+.|+.+....+ ++.+.+++.+.+... ....|... .....+|+++++++ + ++++. .|++|+|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~----~~~~Y~~~----~G~~~lr~aia~~~~~~~~~~~~~~~-~i~vt~G 105 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADP----QNHGYPPF----EGTASFRQAITDWYHRRYGVELDPDS-EALPLLG 105 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCC----CCccCCCC----CCCHHHHHHHHHHHHHHHCCCcCCCC-eEEEccC
Confidence 45788887654433 444666655443211 01122211 11344556666655 5 34541 4889999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++|+.+++.++ ..+|++|+++...|+.+..... ..|++++.+|++.+... ..|++.++ ++
T Consensus 106 ~~~al~~~~~~~-~~~gd~Vlv~~P~y~~~~~~~~---~~g~~~~~v~~~~~~~~-------------~~d~~~l~--~~ 166 (394)
T PRK05942 106 SKEGLTHLALAY-VNPGDVVLVPSPAYPAHFRGPL---IAGAQIYPIILKPENDW-------------LIDLSSIP--EE 166 (394)
T ss_pred hHHHHHHHHHHh-CCCCCEEEEcCCCCcchHHHHH---HcCCEEEEeecCCccCC-------------ccCHHHHH--Hh
Confidence 999999999998 7889999999988887665543 46999999998743221 11678887 44
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCC---CC-
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDL---SK- 263 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~---~~- 263 (508)
+ .++++++++++++||||.+++.+++.++++ +|+++|++||+|+++.. +..+.++ ..
T Consensus 167 ~------~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~---------~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~ 231 (394)
T PRK05942 167 V------AQQAKILYFNYPSNPTTATAPREFFEEIVA---------FARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGA 231 (394)
T ss_pred c------cccceEEEEcCCCCCCCCcCCHHHHHHHHH---------HHHHcCeEEEEeccchhhccCCCCCCChhhCCCc
Confidence 4 467899999999999999999666666554 34459999999999763 2122222 11
Q ss_pred CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 264 YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 264 ~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
.+..+++.|++|.|| .+| +||+++++++++.+...... ...+.+.....++..
T Consensus 232 ~~~~i~~~SfSK~~~-~~GlRiG~i~~~~~l~~~l~~~~~~------------------------~~~~~~~~~q~~~~~ 286 (394)
T PRK05942 232 KDIGVEFHTLSKTYN-MAGWRVGFVVGNRHIIQGLRTLKTN------------------------LDYGIFSALQKAAET 286 (394)
T ss_pred cccEEEEecchhccC-ChhhheeeeecCHHHHHHHHHHHhh------------------------cccCCCHHHHHHHHH
Confidence 134578899999998 457 89999999888776643110 011122233445555
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHH-HH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVE-KL 420 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~-~~ 420 (508)
+++... ..++++++++.+.++++.+.|++. ++++..+.+ +.++|++++.. ++..++. +.
T Consensus 287 ~l~~~~-~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~--------~~f~~~~~~~~----~~~~~~~~~~ 346 (394)
T PRK05942 287 ALQLPD-SYLQQVQERYRTRRDFLIQGLGEL-------GWNIPPTKA--------TMYLWVPCPVG----MGSTDFALNV 346 (394)
T ss_pred HHhCcH-HHHHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCe--------eeEEEEECCCC----CCHHHHHHHH
Confidence 665432 246788888999999999999875 566654432 55888888642 2222344 46
Q ss_pred HhhCCCeeccCCCC
Q 010538 421 ASLSGIQLRTGCFC 434 (508)
Q Consensus 421 L~~~gI~v~~g~~~ 434 (508)
|+++||.+.+|..|
T Consensus 347 l~~~gV~v~~g~~f 360 (394)
T PRK05942 347 LQKTGVVVTPGNAF 360 (394)
T ss_pred HHHCCEEEeCChhh
Confidence 77899999998644
No 98
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.5e-24 Score=221.32 Aligned_cols=281 Identities=15% Similarity=0.049 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCC-CeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQ-SSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g-~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~ 164 (508)
..++|+++|+++|++++ +|++|+|+++++.+++.++. .+| ++|+++...|+ .+...++..|++++.+|++.+.
T Consensus 62 ~~~Lr~aia~~~~~~~~--~I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~---~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 62 PPELINAYSAYAGVAPE--QILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYG---MYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHHhCcCHH--HEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChH---HHHHHHHHcCCEEEEEecCCCC
Confidence 36678999999999998 99999999999999999984 556 88998775444 4445566689999999987544
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
.+ |++.++ . .++|++|++++++||||.++|.+++.++++. |+ ++
T Consensus 136 ~~---------------~~~~l~--------~--~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~---------~~--~~ 179 (354)
T PRK04635 136 QL---------------PLDYIE--------Q--LDGAKLVFICNPNNPTGTVIDRADIEQLIEM---------TP--DA 179 (354)
T ss_pred CC---------------CHHHHH--------h--ccCCCEEEEeCCCCCCCccCCHHHHHHHHHh---------CC--Cc
Confidence 44 455555 1 1478999999999999999999999999984 32 59
Q ss_pred EEEEeccccCCCCCC---CCC-CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhh
Q 010538 245 MVLIDAAKGCVTQPP---DLS-KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 245 ~vivD~a~~~g~~~~---d~~-~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
+||+|+++....... ++. ..+--+++.|+||+|| ++| +|++++++++++.+......+
T Consensus 180 ~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~-l~GlRlG~~i~~~~~~~~l~~~~~~~--------------- 243 (354)
T PRK04635 180 IVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFA-LAGARCGFTLANEELIEILMRVIAPY--------------- 243 (354)
T ss_pred EEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhh-hhHHHHhhhhCCHHHHHHHHhhcCCC---------------
Confidence 999999986432111 111 1122367889999998 667 799999998887665432111
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCC
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTV---PAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHD 395 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~---~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~ 395 (508)
+.+.+.. .+++..+.+.+. .+..+++.+.++++.+.|+++ +++++..+.
T Consensus 244 -----------~~~~~~~---~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~~~-------- 295 (354)
T PRK04635 244 -----------PVPLPVS---EIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY------GGAKVLEGN-------- 295 (354)
T ss_pred -----------CCCHHHH---HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC------CCceECCCC--------
Confidence 1122222 223344433333 344456677778999999887 246665432
Q ss_pred CCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceE
Q 010538 396 TGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAI 475 (508)
Q Consensus 396 ~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 475 (508)
++++++++++ . .++.+.|.++||.++.+. ... .++++
T Consensus 296 -g~f~~~~~~~--~-----~~~~~~l~~~gv~v~~~~---~~~--------------------------------~~~~l 332 (354)
T PRK04635 296 -GNYVLAKFDD--V-----DAVFKALWDAGIVARAYK---DPR--------------------------------LANCI 332 (354)
T ss_pred -CcEEEEECCC--H-----HHHHHHHHHCCEEEEECC---CCC--------------------------------CCCeE
Confidence 5788877753 1 347888999999997532 110 15789
Q ss_pred EEecCCCCCHHHHHHHHHhhhhh
Q 010538 476 RVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 476 Ris~~~~~t~eev~~l~~~~~~~ 498 (508)
|||++ +.+|++++++++++.
T Consensus 333 Ris~~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 333 RFSFS---NRAETDKLIGLIRNQ 352 (354)
T ss_pred EEEeC---CHHHHHHHHHHHHHh
Confidence 99986 899999999998754
No 99
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.93 E-value=1.3e-23 Score=218.94 Aligned_cols=341 Identities=14% Similarity=0.114 Sum_probs=218.8
Q ss_pred CCCeeeeCCCCCCCC-HHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----CC--C-CCCceEEEcC
Q 010538 39 NGTVYLDHAGATLYS-ELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----NA--S-MKDYKCIFTS 110 (508)
Q Consensus 39 ~~~iyld~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~-~~~~~i~~t~ 110 (508)
++.+.|..+.....+ +.+.+++.+ ..... ...|..... ..++|+.+++++ +. . ++ +|++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~-~~~~~----~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~--~i~it~ 98 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKR-AIDAN----QSHYTGMAG----LLELRQAAADFVKEKYNLDYAPEN--EILVTI 98 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHH-HHhcC----CCCCCCCCC----cHHHHHHHHHHHHHHhCCCCCCCC--cEEEeC
Confidence 567888876655443 434444433 32211 111211111 344555555554 43 2 34 799999
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc-CccccccccccccccccchhhhhcC
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV-DNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~-~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
|+++|+.+++.++ ..+|++|++....|+.+.. .++..|.+++.+|.+.++ .+ |++.++
T Consensus 99 G~~~al~~~~~~~-~~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~---------------d~~~l~-- 157 (391)
T PRK07309 99 GATEALSASLTAI-LEPGDKVLLPAPAYPGYEP---IVNLVGAEIVEIDTTENDFVL---------------TPEMLE-- 157 (391)
T ss_pred ChHHHHHHHHHHh-cCCCCEEEEeCCCCcchHH---HHHHcCCEEEEEecCCcCCcC---------------CHHHHH--
Confidence 9999999999998 6789999988877766544 444569999999876432 33 577887
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC-
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY- 264 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~- 264 (508)
+++++ ..++++++++++++||||.+++.+++.++++ +|+++|+++|+|++++. +....++...
T Consensus 158 ~~~~~---~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~---------~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 225 (391)
T PRK07309 158 KAILE---QGDKLKAVILNYPANPTGVTYSREQIKALAD---------VLKKYDIFVISDEVYSELTYTGEPHVSIAEYL 225 (391)
T ss_pred HHhhc---cCCCeEEEEEECCCCCCCcCcCHHHHHHHHH---------HHHHcCcEEEEEccccceeeCCCCCCCHHHhc
Confidence 66532 1346899999999999999999776666665 45559999999999864 2222333222
Q ss_pred -CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 265 -PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 265 -~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
+..+++.|++|.|| .+| +||+++++++++.+.... . +...+++.....++..
T Consensus 226 ~~~~i~~~S~SK~~g-~~GlRvG~~v~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~q~~~~~ 280 (391)
T PRK07309 226 PDQTILINGLSKSHA-MTGWRIGLIFAPAEFTAQLIKSH-Q-----------------------YLVTAATTMAQFAAVE 280 (391)
T ss_pred cCCEEEEecChhhcc-CccceeEEEEeCHHHHHHHHHHH-h-----------------------hcccCCChHHHHHHHH
Confidence 23488999999998 447 899999998877655321 0 1111233333444443
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHH-H
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEK-L 420 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~-~ 420 (508)
+++.... .....++++.+.++++.+.|++. ++.+..|.+ +.++|++++.... .+..++.+ +
T Consensus 281 ~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~p~g--------g~~~~~~l~~~~~--~~~~~~~~~l 342 (391)
T PRK07309 281 ALTNGKD-DALPMKKEYIKRRDYIIEKMTDL-------GFKIIKPDG--------AFYIFAKIPAGYN--QDSFKFLQDF 342 (391)
T ss_pred HHhCChh-HHHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCe--------eEEEEEECCCCCC--CCHHHHHHHH
Confidence 4332111 12445677788888999999875 566665543 5677878764211 12234554 4
Q ss_pred HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 421 ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 421 L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
++++||.+.+|..+... .++++|++++. +.++++..++.|+++++
T Consensus 343 ~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 343 ARKKAVAFIPGAAFGPY---------------------------------GEGYVRLSYAA--SMETIKEAMKRLKEYME 387 (391)
T ss_pred HHhCCEEEeCchhhCCC---------------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 67789999998654221 25799999984 67899999988887764
Q ss_pred h
Q 010538 501 F 501 (508)
Q Consensus 501 ~ 501 (508)
-
T Consensus 388 ~ 388 (391)
T PRK07309 388 E 388 (391)
T ss_pred h
Confidence 3
No 100
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.3e-23 Score=215.57 Aligned_cols=334 Identities=16% Similarity=0.113 Sum_probs=225.9
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD 103 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~ 103 (508)
.+..++. +|.. ++++.|+.+.... +++.+.+++.+ ...... .|... .. ..+|+.+|++++++++
T Consensus 25 ~~~~~~~-~~~~--~~~i~l~~~~~~~~~~~~~~~al~~-~~~~~~-----~Y~~~----~g-~~lr~~ia~~~~~~~~- 89 (371)
T PRK05166 25 TIEEVRA-RYGV--PRIAKLGSNENPLGPSPAVRRAFAD-IAELLR-----LYPDP----QG-RALREAIAARTGVPAD- 89 (371)
T ss_pred CHHHHHH-hcCC--cceEEcCCCCCCCCCCHHHHHHHHH-HHHHhh-----cCCCC----cH-HHHHHHHHHHhCcCHH-
Confidence 4556666 7763 5789998775443 45555555433 222111 12111 11 2688999999999888
Q ss_pred ceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccch
Q 010538 104 YKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 104 ~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
+|++|+|+++++.+++.++ .++|+.|++....|+. ....++..|++++.+|.+.+..+ |+
T Consensus 90 -~i~~t~G~~~~l~~~~~~~-~~~gd~vli~~P~y~~---~~~~~~~~g~~~~~v~~~~~~~~---------------~~ 149 (371)
T PRK05166 90 -RIILGNGSEDLIAVICRAV-LRPGDRVVTLYPSFPL---HEDYPTMMGARVERVTVTPDLGF---------------DL 149 (371)
T ss_pred -HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChHH---HHHHHHHcCCeEEEeecCCCCCC---------------CH
Confidence 8999999999999999998 6889999987655544 44555667999999998755445 57
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCC
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPD 260 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d 260 (508)
++++ +++ .+++++|++++++||||.++|.+++.++++ +|+ .+++|++|+++..-. ...+
T Consensus 150 ~~l~--~~~------~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~---------~~~-~~~~ii~De~y~~~~~~~~~~~ 211 (371)
T PRK05166 150 DALC--AAV------ARAPRMLMFSNPSNPVGSWLTADQLARVLD---------ATP-PETLIVVDEAYAEYAAGDDYPS 211 (371)
T ss_pred HHHH--Hhh------hcCCCEEEEeCCCCCCCCCCCHHHHHHHHH---------hCC-CCcEEEEECcHHHhcCCcCccc
Confidence 8888 544 456799999999999999999999999998 354 488999999976321 1111
Q ss_pred ----CCCC-CCcEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCC
Q 010538 261 ----LSKY-PVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTAS 332 (508)
Q Consensus 261 ----~~~~-~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 332 (508)
+... +..+++.|++|.|| .+| +||+++. +++++.+..... ....+
T Consensus 212 ~~~~~~~~~~~vi~i~SfSK~~~-l~GlRiG~~i~~~~~l~~~~~~~~~--------------------------~~~~~ 264 (371)
T PRK05166 212 ALTLLKARGLPWIVLRTFSKAYG-LAGLRVGYGLVSDPELVGLLDRVRT--------------------------PFNVN 264 (371)
T ss_pred HHHHHhhcCCCEEEEeechHhhh-cchhheeeeecCCHHHHHHHHHhcc--------------------------CCCCC
Confidence 1111 12478999999998 557 8998874 556554432210 01123
Q ss_pred hhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc
Q 010538 333 FLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF 412 (508)
Q Consensus 333 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 412 (508)
.....++.+++.. ...+++..+.+++.++++.+.|++. ++.+. ++. +++++++++.
T Consensus 265 ~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~-p~~--------g~fl~~~~~~------ 320 (371)
T PRK05166 265 GAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-------GYRIA-PSR--------ANFLFFDARR------ 320 (371)
T ss_pred HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-------cCeeC-CCc--------CCEEEEeCCC------
Confidence 3333333333331 1225666777888889999999876 45543 322 6788887642
Q ss_pred CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHH
Q 010538 413 GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNR 492 (508)
Q Consensus 413 ~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~ 492 (508)
+..++.+.|.++||.+++|... + ..+++|||++ +.++.+++.
T Consensus 321 ~~~~l~~~l~~~gi~v~p~~~~--~---------------------------------~~~~iRi~~~---~~~~~~~l~ 362 (371)
T PRK05166 321 PASAVAEALLRQGVIVKPWKQP--G---------------------------------FETFIRVSIG---SPEENDHFV 362 (371)
T ss_pred CHHHHHHHHHHCCeEEecCCCC--C---------------------------------CCCeEEEEcC---CHHHHHHHH
Confidence 1235788888899999987521 1 1578999999 788899999
Q ss_pred Hhhhhhhh
Q 010538 493 CSSFDFVN 500 (508)
Q Consensus 493 ~~~~~~~~ 500 (508)
+.++.+++
T Consensus 363 ~~l~~i~~ 370 (371)
T PRK05166 363 AALDKVLE 370 (371)
T ss_pred HHHHHHhh
Confidence 99887653
No 101
>PLN00175 aminotransferase family protein; Provisional
Probab=99.93 E-value=1.3e-23 Score=220.20 Aligned_cols=345 Identities=11% Similarity=0.036 Sum_probs=225.3
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~a 115 (508)
.+.+.|..+..... ++.+.+++.+ .+.. ....|.......++.+++.+.+.+..|. +++. +|++|+|+++|
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~-~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~-~I~vt~G~~~a 127 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQ-AIRD----GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEK-EVTVTSGCTEA 127 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHH-HHhc----CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-CEEEeCCHHHH
Confidence 46788887765544 4445555433 3322 1122322222334444444444444453 4531 59999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCccccccccccccccccchhhhhcCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
+.+++.++ ..+|++|++....|+.+.. .++..|++++.++++.+ ..+ |++.++ +.+
T Consensus 128 l~~~~~~l-~~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~---------------~~~~l~--~~~-- 184 (413)
T PLN00175 128 IAATILGL-INPGDEVILFAPFYDSYEA---TLSMAGAKIKTVTLRPPDFAV---------------PEDELK--AAF-- 184 (413)
T ss_pred HHHHHHHh-CCCCCEEEEeCCCchhHHH---HHHHcCCEEEEEECCcccCCC---------------CHHHHH--Hhc--
Confidence 99999988 6889999998866665544 44557999999998643 233 678888 554
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCCCCC----CCCc
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPDLSK----YPVD 267 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d~~~----~~~D 267 (508)
.+++++|++++++||||.+++.+++.++++ +|++++++||+|+++.... .+..+.. .+..
T Consensus 185 ----~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~---------~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~v 251 (413)
T PLN00175 185 ----TSKTRAILINTPHNPTGKMFTREELELIAS---------LCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERT 251 (413)
T ss_pred ----CcCceEEEecCCCCCCCcCCCHHHHHHHHH---------HHHHcCcEEEEecccCccccCCcccChhhCCCCcCcE
Confidence 457899999999999999999777666665 4555999999999986422 1222221 1345
Q ss_pred EEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
+++.|++|.|+ .+| +||+++++++++.+..... ....+.+.+...++..+++.
T Consensus 252 i~i~SfSK~~~-~~G~RiG~~v~~~~l~~~l~~~~~------------------------~~~~~~s~~~Q~a~~~~l~~ 306 (413)
T PLN00175 252 VTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHS------------------------FLTFATATPMQWAAVAALRA 306 (413)
T ss_pred EEEecchhhcc-CcchheeeeEeCHHHHHHHHHHHh------------------------hccCCCCHHHHHHHHHHHhC
Confidence 88899999998 447 8999999988776543310 01122333344444445542
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hhC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SLS 424 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~~ 424 (508)
- +..++..++++.+.++++.+.|++. ++.+..|.+ +.++++++...+. .+..++.+.| +++
T Consensus 307 ~-~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~p~g--------~~f~~~~~~~~~~--~~~~~~~~~ll~~~ 368 (413)
T PLN00175 307 P-ESYYEELKRDYSAKKDILVEGLKEV-------GFKVYPSSG--------TYFVMVDHTPFGF--ENDIAFCEYLIEEV 368 (413)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCe--------eEEEEEeccccCC--CCHHHHHHHHHHhC
Confidence 1 1236778888999999999999886 577665543 6678888742110 0223455555 578
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
||.+.+|..|.... ....+++|||++. +.++++..++.|+++++
T Consensus 369 gV~v~pg~~F~~~~------------------------------~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 369 GVAAIPPSVFYLNP------------------------------EDGKNLVRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred CEEEeCchHhCCCC------------------------------CCCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 99999987553210 0125689999984 79999999999887654
No 102
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=219.64 Aligned_cols=340 Identities=11% Similarity=0.054 Sum_probs=220.6
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc-----CCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF-----NASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-----~~~~~~~~i~~t~g~ 112 (508)
.+.++|+.+.... +++.+.+++ ........ .|.. .....++|+.+++++ +++++ +|++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~-~~~~~~~~-----~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~--~i~~t~G~ 97 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAI-KNYDEEVL-----AYSH----SQGIPELREAFAKYYKKWGIDVEPD--EILITNGG 97 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHH-HHHhcCCc-----CcCC----CCCCHHHHHHHHHHHHHhCCCCCcc--eEEEcCCh
Confidence 4689999988764 455555554 33322111 1211 122456777787776 46777 89999999
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCC
Q 010538 113 TAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASF 192 (508)
Q Consensus 113 t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l 192 (508)
++|+.+++.++ .++|++|+++...|+.+..+ ++..|++++.++.+.+..+.. ++++.++ +++
T Consensus 98 ~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~g~~~------------~~~~~l~--~~~ 159 (397)
T PRK07568 98 SEAILFAMMAI-CDPGDEILVPEPFYANYNGF---ATSAGVKIVPVTTKIEEGFHL------------PSKEEIE--KLI 159 (397)
T ss_pred HHHHHHHHHHh-cCCCCEEEEecCCCccHHHH---HHHcCCEEEEeecCcccCCCC------------CCHHHHH--Hhc
Confidence 99999999988 68899999988766655443 445699999999863222210 1357777 444
Q ss_pred CCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCC----C
Q 010538 193 PERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSK----Y 264 (508)
Q Consensus 193 ~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~----~ 264 (508)
++++++|++++++||||.+++.+++.++++ +|+++|+++++|+++.. +..+.++.. .
T Consensus 160 ------~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~---------~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~ 224 (397)
T PRK07568 160 ------TPKTKAILISNPGNPTGVVYTKEELEMLAE---------IAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLE 224 (397)
T ss_pred ------CccceEEEEECCCCCCCccCCHHHHHHHHH---------HHHHCCcEEEEeccchhcccCCCCccChhhcCCCc
Confidence 457899999999999999998665555554 34449999999999863 211122221 1
Q ss_pred CCcEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 265 PVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 265 ~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
+.-+++.|++|.|| ++| +|+++++ ++.++.+..... ...+.+.....++..
T Consensus 225 ~~~i~~~S~SK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~-------------------------~~~~~s~~~q~~~~~ 278 (397)
T PRK07568 225 DRVIIIDSVSKRYS-ACGARIGCLISKNKELIAAAMKLCQ-------------------------ARLSPPTLEQIGAAA 278 (397)
T ss_pred CCEEEEecchhhcc-CCCcceEEEecCCHHHHHHHHHHhh-------------------------ccCCCCcHHHHHHHH
Confidence 23478889999998 546 8999885 456544332200 001223334444444
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
+++.. +..++++.+++++.++++.+.|++. +++.+..|.+ +.+++++++..+ ..++.+.|
T Consensus 279 ~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~g--------~~~~~~~l~~~~-----~~~~~~~l 338 (397)
T PRK07568 279 LLDTP-ESYFDEVREEYKKRRDILYEELNKI------PGVVCEKPKG--------AFYIIAKLPVDD-----AEDFAKWL 338 (397)
T ss_pred HhhCC-HHHHHHHHHHHHHHHHHHHHHHhcC------CCceecCCCc--------ceEEEEecCCCC-----HHHHHHHH
Confidence 55421 2235677788889999999999876 3566554432 567888886432 23466666
Q ss_pred hh------CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 422 SL------SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 422 ~~------~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
.+ +||.+.+|..|.... +...+++|+|++. +.++++..++.|
T Consensus 339 ~~~~~~~~~gv~v~pg~~f~~~~------------------------------~~~~~~iRls~~~--~~~~~~~~~~~l 386 (397)
T PRK07568 339 LTDFNYNGETVMVAPASGFYATP------------------------------GLGKNEIRIAYVL--NEEDLKRAMEIL 386 (397)
T ss_pred HhhcccccceEEEeCchHhcCCC------------------------------CCCCCeEEEEEeC--CHHHHHHHHHHH
Confidence 43 699999987542210 1124789999983 679999999999
Q ss_pred hhhhhh
Q 010538 496 FDFVNF 501 (508)
Q Consensus 496 ~~~~~~ 501 (508)
.++++-
T Consensus 387 ~~~l~~ 392 (397)
T PRK07568 387 KEALEK 392 (397)
T ss_pred HHHHHH
Confidence 887754
No 103
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=1.3e-23 Score=217.89 Aligned_cols=338 Identities=14% Similarity=0.095 Sum_probs=221.3
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----CC--CCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----NA--SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~~i~~t~g 111 (508)
++.+.|+.+-.... ++.+.+++.+.. .. ....|..... ...+|+.+|+++ |. ++++ +|++|+|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~-~~----~~~~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSL-EQ----GYTSYTANAG----LLELRQEIAKYLKKRFAVSYDPND-EIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHH-hc----CCCCCCCCCC----cHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCC
Confidence 46788887765443 333445543332 21 1111211111 344555555555 43 4431 6999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc--cCccccccccccccccccchhhhhcC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA--VDNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~--~~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
+++|+.+++.++ .++|+.|++....|+.+.... +..|.++..++.+.+ ..+ |++.++
T Consensus 90 ~~~al~~~~~~l-~~~gd~vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~---------------d~~~l~-- 148 (378)
T PRK07682 90 ASQALDVAMRAI-INPGDEVLIVEPSFVSYAPLV---TLAGGVPVPVATTLENEFKV---------------QPAQIE-- 148 (378)
T ss_pred hHHHHHHHHHHh-CCCCCEEEEeCCCchhhHHHH---HHcCCEEEEeecCCccCCCC---------------CHHHHH--
Confidence 999999999998 688999999987777655444 445889988887532 233 678888
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC---CCC---CCC
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ---PPD---LSK 263 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~---~~d---~~~ 263 (508)
+++ .++++++++++++||||.+++.+++.++++ +|+++++++|+|++++.... +.. +..
T Consensus 149 ~~~------~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~---------~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 213 (378)
T PRK07682 149 AAI------TAKTKAILLCSPNNPTGAVLNKSELEEIAV---------IVEKHDLIVLSDEIYAELTYDEAYTSFASIKG 213 (378)
T ss_pred hhc------CcccEEEEEECCCCCcCcCcCHHHHHHHHH---------HHHHcCcEEEEehhhhhcccCCCCCChhhccc
Confidence 555 356899999999999999999776666655 45559999999999874321 111 111
Q ss_pred -CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHH
Q 010538 264 -YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 264 -~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~ 340 (508)
.+..+++.|++|.|+ .+| +||+++++++++.+..... +...+.+.....++.
T Consensus 214 ~~~~~i~~~S~SK~~~-~~GlR~G~~~~~~~~i~~l~~~~~------------------------~~~~~~~~~~q~a~~ 268 (378)
T PRK07682 214 MRERTILISGFSKGFA-MTGWRLGFIAAPVYFSEAMLKIHQ------------------------YSMMCAPTMAQFAAL 268 (378)
T ss_pred ccCCEEEEecCccccc-ChhhhhhhhhcCHHHHHHHHHHHH------------------------hhccCCCHHHHHHHH
Confidence 134688999999998 557 8999999998877654310 011122333333333
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL 420 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 420 (508)
.+++... ..++++++++++.++++.+.|+++ ++++..|.+ +.++|..++... .+..++.+.
T Consensus 269 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~p~g--------~~~~~~~~~~~~---~~~~~~~~~ 329 (378)
T PRK07682 269 EALRAGN-DDVIRMRDSYRKRRNFFVTSFNEI-------GLTCHVPGG--------AFYAFPSISSTG---LSSEEFAEQ 329 (378)
T ss_pred HHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHC-------CCccCCCCe--------eEEEEEeccCCC---CCHHHHHHH
Confidence 3443211 226777888899999999999886 566554433 566766664211 233456666
Q ss_pred H-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 421 A-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 421 L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
| +++||.+++|..|... .++++|||++. +.++++..++.|++++
T Consensus 330 ll~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~~--~~~~l~~~l~~l~~~l 374 (378)
T PRK07682 330 LLLEEKVAVVPGSVFGES---------------------------------GEGFIRCSYAT--SLEQLQEAMKRMKRFV 374 (378)
T ss_pred HHHhCCEEEcCchhhCcC---------------------------------CCCeEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 5 5789999998765321 25789999985 6899999999988876
Q ss_pred hh
Q 010538 500 NF 501 (508)
Q Consensus 500 ~~ 501 (508)
+-
T Consensus 375 ~~ 376 (378)
T PRK07682 375 EN 376 (378)
T ss_pred hh
Confidence 53
No 104
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.5e-23 Score=218.01 Aligned_cols=337 Identities=14% Similarity=0.077 Sum_probs=218.8
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~t~g 111 (508)
++.+-|..+....+ ++.+++++.+..... ...|..... ...+|+.+++++ +++++ +|++|+|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-----~~~Y~~~~G----~~~lr~~ia~~~~~~~~~~~~~~--~i~it~G 97 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKG-----HTRYTDSGG----DVELIEEIIKYYSKNYDLSFKRN--EIMATVG 97 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-----CCCCCCCCC----cHHHHHHHHHHHHHHhCCCCChh--hEEEcCC
Confidence 45677776654433 445555554433211 111221111 234555666555 45777 8999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++|+.+++.++ ..+|+.|+++...|+.+... ++..|.+++.+|..++... ..|++.++ ++
T Consensus 98 ~~~al~~~~~~~-~~~gd~vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~-------------~~d~~~l~--~~ 158 (384)
T PRK06348 98 ACHGMYLALQSI-LDPGDEVIIHEPYFTPYKDQ---IEMVGGKPIILETYEEDGF-------------QINVKKLE--AL 158 (384)
T ss_pred hHHHHHHHHHHh-cCCCCEEEEeCCCCcchHHH---HHHcCCEEEEecCCcCcCC-------------cCCHHHHH--Hh
Confidence 999999999998 68899999888666655544 4445889988887432221 11678888 55
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC---CCCCCCCC----C
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV---TQPPDLSK----Y 264 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g---~~~~d~~~----~ 264 (508)
+ .+++++|++++++||||.+++.+++.++++ +|+++|++||+|+++..- .....+.. .
T Consensus 159 ~------~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 223 (384)
T PRK06348 159 I------TSKTKAIILNSPNNPTGAVFSKETLEEIAK---------IAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP 223 (384)
T ss_pred h------CcCccEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHCCeEEEEecccccceeCCCccchhhcCCCc
Confidence 4 356789999999999999999877777765 455699999999998632 11122221 1
Q ss_pred CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHH
Q 010538 265 PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHG 342 (508)
Q Consensus 265 ~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~a 342 (508)
+..+++.|++|.+|.| | +||+++++++++.+...... ...+.+.....++..+
T Consensus 224 ~~vi~~~SfSK~~~l~-GlRiG~~v~~~~~~~~~~~~~~~------------------------~~~~~~~~~q~~~~~~ 278 (384)
T PRK06348 224 ERTITFGSFSKDFAMT-GWRIGYVIAPDYIIETAKIINEG------------------------ICFSAPTISQRAAIYA 278 (384)
T ss_pred CcEEEEecchhccCCc-cccceeeecCHHHHHHHHHHHHh------------------------ccCCCCHHHHHHHHHH
Confidence 3458889999999834 6 89999998887665433110 1112233334444445
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-
Q 010538 343 FNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA- 421 (508)
Q Consensus 343 l~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L- 421 (508)
++..++ .++.+++.+++.++++.+.|+++ +++.+..+.+ +.++|++++... ++..++.+.+
T Consensus 279 l~~~~~-~~~~~~~~~~~r~~~~~~~L~~~------~~~~~~~p~g--------g~~~~~~~~~~~---~~~~~l~~~l~ 340 (384)
T PRK06348 279 LKHRDT-IVPLIKEEFQKRLEYAYKRIESI------PNLSLHPPKG--------SIYAFINIKKTG---LSSVEFCEKLL 340 (384)
T ss_pred HhCcHH-HHHHHHHHHHHHHHHHHHHHhcC------CCceeccCCe--------eEEEEEecccCC---CCHHHHHHHHH
Confidence 443221 24667777888888899999876 3566655443 567888886321 2233466655
Q ss_pred hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 422 SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 422 ~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
+++||.+.+|..|... ..+++|||++ .+.++++..++.|+++
T Consensus 341 ~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 341 KEAHVLVIPGKAFGES---------------------------------GEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred HhCCEEEcCchhhccC---------------------------------CCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 5789999998765321 2578999997 4788999988887654
No 105
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.93 E-value=7.2e-24 Score=226.46 Aligned_cols=362 Identities=12% Similarity=0.032 Sum_probs=226.1
Q ss_pred HHHHHHhhccCC-CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------C
Q 010538 27 DQIRATEFKRLE-NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------A 99 (508)
Q Consensus 27 ~~~r~~~f~~~~-~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~ 99 (508)
..+|+ -+..+. ++.|. |+++++..|..+++++.+ .+...... ...|... .....+|+.+|++++ +
T Consensus 65 ~~~~~-~~~~~~~p~~i~-~~~~~~~~P~~~~~~~~~-~~~~~~~~-~~~Y~~~----~G~~~LR~aia~~~~~~~g~~~ 136 (481)
T PTZ00377 65 TFYRQ-VLSLVEYPFLLE-DPSVSSLFPADVVARAKE-YLNAIGGG-TGAYTDS----AGYPFVRKAVAAFIERRDGVPK 136 (481)
T ss_pred hHHHH-HHHHccChhhhc-CccccccCCHHHHHHHHH-HHHhCCCc-ccCcCcc----cCCHHHHHHHHHHHHHhcCCCC
Confidence 34554 443332 23444 444666678888877643 33321111 1123222 234556666666654 5
Q ss_pred CCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccccccccc
Q 010538 100 SMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 100 ~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
+++ +|++|+|+++|+.+++.++...+|+.|+++...|+++.... +..|.+++.+|++.+..+
T Consensus 137 ~~~--~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~---~~~g~~~v~v~~~~~~~~------------- 198 (481)
T PTZ00377 137 DPS--DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAI---TLLGGKQVPYYLDEEKGW------------- 198 (481)
T ss_pred Chh--hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHH---HHcCCEEEEEEeccccCC-------------
Confidence 677 89999999999999999983368999999987777665444 446999999998753222
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----C
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----V 255 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g 255 (508)
.+|+++++ +++.+.....++++++++++++||||.+++.+++.++++ +|+++|++||+|+++.. +
T Consensus 199 ~~d~~~l~--~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~---------~a~~~~~~iI~De~Y~~l~~~~ 267 (481)
T PTZ00377 199 SLDQEELE--EAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIK---------FCYEKGIVLMADEVYQENIYDG 267 (481)
T ss_pred CCCHHHHH--HHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHH---------HHHHCCCEEEEehhhHhhccCC
Confidence 11577887 554211011237899989999999999999776666665 45559999999999863 1
Q ss_pred C-CCCCCC----CCC-------CcEEEEecccc-ccCCCc--ceEEEE---echhHhhhccccccCceEEecccchhhhh
Q 010538 256 T-QPPDLS----KYP-------VDFVVMSFYKI-FGYPTG--LGALIM---RNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 256 ~-~~~d~~----~~~-------~D~~~~S~~K~-~g~P~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
. ...++. .+. .-+++.|++|. ++ .+| +||+++ ++++++.+.....
T Consensus 268 ~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~-~~GlRiG~~~~~~~p~~li~~l~~~~~---------------- 330 (481)
T PTZ00377 268 EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIG-ECGRRGGYFELTNIPPEVREQIYKLAS---------------- 330 (481)
T ss_pred CCCcccHHHHHHhhcccccCCeEEEEEecCCccccc-CCcCceEEEEEeCCCHHHHHHHHHHhh----------------
Confidence 1 111211 111 12677899996 56 567 899987 6777666554310
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHH----------HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNL----------INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~----------~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
...+ ++.....++..+++. +.+ .+..+++++++.++.+.+.|+++ +++++..|.
T Consensus 331 --------~~~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~rr~~l~~~L~~~------~g~~~~~p~ 394 (481)
T PTZ00377 331 --------INLC-SNVVGQLMTGLMCNPPREGDASYPLYKR-ERDAIFTSLKRRAELLTDELNKI------EGVSCQPVE 394 (481)
T ss_pred --------eecC-CChHHHHHHHHHhCCCCCCcccHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC------CCcEeecCC
Confidence 0112 334444445545531 111 13444455678888899999887 368877665
Q ss_pred CCCcccCCCCceEEEEeeCCCC-------Ccc--CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCC
Q 010538 388 TSEVSYHDTGSMVSFNLKRPDG-------SWF--GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGH 458 (508)
Q Consensus 388 ~~~~~~~~~~~~v~~~~~~~~~-------~~~--~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~ 458 (508)
+ +.++|+++.-.+. ..+ +...+.+.|+++||.+.+|..|....
T Consensus 395 g--------g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~-------------------- 446 (481)
T PTZ00377 395 G--------AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKP-------------------- 446 (481)
T ss_pred e--------eEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCC--------------------
Confidence 4 6777766531100 000 11124577788999999998664211
Q ss_pred ccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 459 VCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 459 ~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..+++|+|+. .+.++++..++.|.++++
T Consensus 447 ------------~~~~~Rls~~--~~~e~l~~~l~rl~~~~~ 474 (481)
T PTZ00377 447 ------------GTYHFRITIL--PPEEQIEEMVKKIKEFHE 474 (481)
T ss_pred ------------CCCEEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 1468999998 678899999999888764
No 106
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=218.93 Aligned_cols=340 Identities=14% Similarity=0.078 Sum_probs=224.2
Q ss_pred CCCeeeeCCCCCCCC-HHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLYS-ELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~t~g 111 (508)
++.+.|..+-...++ +.+.+++ .+.+.+ ....|... .....+|+.+++++ +++++ +|++|+|
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~----~~~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g 99 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAA-IEALDD----GKTKYTPA----AGIPELREAIAAKLKRDNGLDYDPS--QVIVTTG 99 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHH-HHHHhc----CCCCcCCC----CChHHHHHHHHHHHHHHhCCCCCHH--HEEEeCC
Confidence 566777776655553 4444444 333322 11112211 12456677777766 45666 8999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++|+.+++.++ ..+|+.|+++...|+.+... ++..|.+++.+|.+.+... .+|+++++ +.
T Consensus 100 ~~~a~~~~~~~~-~~~gd~vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~-------------~~d~~~l~--~~ 160 (393)
T PRK05764 100 AKQALYNAFMAL-LDPGDEVIIPAPYWVSYPEM---VKLAGGVPVFVPTGEENGF-------------KLTVEQLE--AA 160 (393)
T ss_pred cHHHHHHHHHHh-cCCCCEEEecCCCCcchHHH---HHHcCCEEEEEecCcccCC-------------cCCHHHHH--Hh
Confidence 999999999988 67889999998777765444 4456999999998643222 12678888 55
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC----CCCCCC-----C
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV----TQPPDL-----S 262 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g----~~~~d~-----~ 262 (508)
+ .+++++|++++++||||.++|.+.+.++++ +|+++|+++++|.+++.. ..+..+ .
T Consensus 161 l------~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 225 (393)
T PRK05764 161 I------TPKTKALILNSPSNPTGAVYSPEELEAIAD---------VAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPE 225 (393)
T ss_pred h------CccceEEEEECCCCCCCcccCHHHHHHHHH---------HHHHCCcEEEEeccccceeeCCCCcccHHHcCCC
Confidence 4 357899999999999999999665555544 344499999999987642 111121 1
Q ss_pred CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHH
Q 010538 263 KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 263 ~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~ 340 (508)
..+.++++.|++|+++ ++| +|+++.++++++.+...... ....++.....++.
T Consensus 226 ~~~~~i~~~s~SK~~~-~~G~RiG~i~~~~~~~~~~~~~~~~------------------------~~~~~~~~~q~~~~ 280 (393)
T PRK05764 226 LRDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQSH------------------------STSNPTSIAQYAAV 280 (393)
T ss_pred CcCCEEEEecCccccc-CccceeEEEecCHHHHHHHHHHHhh------------------------cccCCChHHHHHHH
Confidence 2246789999999998 557 89999998887766543110 11122333333444
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC-ccCHHHHHH
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS-WFGYREVEK 419 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~l~~ 419 (508)
.+++. ....++..++++.++++++.+.|+++ +++.+..+.+ +.++++.++..... ..+..++.+
T Consensus 281 ~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~------~g~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
T PRK05764 281 AALNG-PQDEVEEMRQAFEERRDLMVDGLNEI------PGLECPKPEG--------AFYVFPNVSKLLGKSITDSLEFAE 345 (393)
T ss_pred HHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhC------CCCcccCCCc--------ceEEEEecccccccccCCHHHHHH
Confidence 44431 12235667788888889999999886 3677665543 56778777653111 012234555
Q ss_pred H-HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 420 L-ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 420 ~-L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
. ++++||.+++|..|.. .+++|+|++. +.++++.+++.|.++
T Consensus 346 ~l~~~~gi~v~~g~~f~~-----------------------------------~~~vRis~~~--~~~~~~~~i~~l~~~ 388 (393)
T PRK05764 346 ALLEEAGVAVVPGIAFGA-----------------------------------PGYVRLSYAT--SLEDLEEGLERIERF 388 (393)
T ss_pred HHHHhCCEEEccccccCC-----------------------------------CCEEEEEecC--CHHHHHHHHHHHHHH
Confidence 5 4678999999865421 4789999984 799999999999887
Q ss_pred hh
Q 010538 499 VN 500 (508)
Q Consensus 499 ~~ 500 (508)
++
T Consensus 389 ~~ 390 (393)
T PRK05764 389 LE 390 (393)
T ss_pred HH
Confidence 65
No 107
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=3.1e-24 Score=231.15 Aligned_cols=344 Identities=10% Similarity=0.019 Sum_probs=221.9
Q ss_pred CCCeeeeCCCCC----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEE
Q 010538 39 NGTVYLDHAGAT----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIF 108 (508)
Q Consensus 39 ~~~iyld~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~ 108 (508)
.+.+.|+.+-.. ++|+.+++++.+... ... .|.. ......+|+.+|+++ +++++ +|++
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~-~~~-----~Y~~----~~G~~~lReaia~~~~~~~~~~~~~~--~I~i 213 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQLT-DTE-----GYSD----SKGLFSARKAIMQYAQLKGLPNVDVD--DIYT 213 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHHhh-cCC-----CCCC----CcChHHHHHHHHHHHHhcCCCCCChh--HEEE
Confidence 578999985442 336777777665432 111 1221 122566788888887 67888 8999
Q ss_pred cCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhc
Q 010538 109 TSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRK 188 (508)
Q Consensus 109 t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~ 188 (508)
|+|+++++.+++.++ ..+|++|+++...|+.+.... +..|.+++.++.+.+..+ .+|+++++
T Consensus 214 t~G~~eal~~~~~~l-~~~Gd~Vli~~P~y~~y~~~~---~~~g~~~v~~~~~~~~~~-------------~~d~~~l~- 275 (517)
T PRK13355 214 GNGVSELINLSMSAL-LDDGDEVLIPSPDYPLWTACV---NLAGGTAVHYRCDEQSEW-------------YPDIDDIR- 275 (517)
T ss_pred eCcHHHHHHHHHHHh-CCCCCEEEEcCCCCcCHHHHH---HHCCCEEEEeecCcccCC-------------CCCHHHHH-
Confidence 999999999999998 688999999998887766544 446999999988654322 22788888
Q ss_pred CCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC
Q 010538 189 GASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY 264 (508)
Q Consensus 189 ~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~ 264 (508)
+++ +++|+++++++++||||.+++.+++.++++ +|++++++||+|+++.. +....++...
T Consensus 276 -~~~------~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~---------~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~ 339 (517)
T PRK13355 276 -SKI------TSRTKAIVIINPNNPTGALYPREVLQQIVD---------IAREHQLIIFSDEIYDRLVMDGLEHTSIASL 339 (517)
T ss_pred -Hhc------CcCceEEEEECCCCCCCcCcCHHHHHHHHH---------HHHHcCcEEEEehhhhhhcCCCCCcccHHHh
Confidence 444 568899999999999999999666666655 45559999999999763 2222232222
Q ss_pred CCc---EEEEeccccccCCCc--ceEEEEe--chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHH
Q 010538 265 PVD---FVVMSFYKIFGYPTG--LGALIMR--NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIA 337 (508)
Q Consensus 265 ~~D---~~~~S~~K~~g~P~G--~G~l~~~--~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 337 (508)
..+ +++.|++|.|+ .+| +||++++ ++.++.+...+.- .. ......+.+...
T Consensus 340 ~~~~~vi~~~S~SK~~~-~~G~RiG~~i~~~~~~~~~~~~~~l~~--------------------~~-~~~~~~~~~~q~ 397 (517)
T PRK13355 340 APDLFCVTFSGLSKSHM-IAGYRIGWMILSGNKRIAKDYIEGLNM--------------------LA-NMRLCSNVPAQS 397 (517)
T ss_pred CCCCeEEEEecchhhcc-CcccceEEEEeeCchhhHHHHHHHHHH--------------------Hh-cCcCCcChHHHH
Confidence 122 44589999998 557 8999965 3332211110000 00 001123444445
Q ss_pred HHHHHHHHHH--hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC-CCccCH
Q 010538 338 SIRHGFNLIN--SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD-GSWFGY 414 (508)
Q Consensus 338 ~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~ 414 (508)
++..+++... +..+... +++.+.++++.+.|+++ +++++..|.+ +.+++++++... +..-+.
T Consensus 398 a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~------~g~~~~~p~g--------~fy~~~~l~~~~~~~~~~~ 462 (517)
T PRK13355 398 IVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAI------PGISAVKPKA--------AFYIFPKIDVKKFNIHDDE 462 (517)
T ss_pred HHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcC------CCcccCCCCe--------eeEEEeecCcccCCCCCHH
Confidence 5555553110 0012222 34455678899999887 3677766553 566666775310 000012
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
..+.++|.++||.+.+|..|... .++++|||+. .+.++++..++.
T Consensus 463 ~~~~~ll~~~gV~v~pg~~F~~~---------------------------------~~~~~Ris~~--~~~~~l~~a~~r 507 (517)
T PRK13355 463 QFALDLLHDKKVLIVQGTGFNWD---------------------------------KPDHFRVVYL--PRLEDLEDAMDR 507 (517)
T ss_pred HHHHHHHHhCCEEEeCcchhCCC---------------------------------CcCEEEEEeC--CCHHHHHHHHHH
Confidence 33567788999999999765321 2678999995 688999999999
Q ss_pred hhhhhh
Q 010538 495 SFDFVN 500 (508)
Q Consensus 495 ~~~~~~ 500 (508)
|.++++
T Consensus 508 l~~~~~ 513 (517)
T PRK13355 508 LADFFS 513 (517)
T ss_pred HHHHHH
Confidence 888775
No 108
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=1.5e-23 Score=219.90 Aligned_cols=338 Identities=12% Similarity=0.066 Sum_probs=221.3
Q ss_pred CeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 41 TVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 41 ~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
..|..|...+. .+|.+++++.+.. ..+..+.. ....-+.......++++.+|+++|.+ + .|++++| ++|+..+
T Consensus 49 ~~~~sn~yl~l~~~p~v~~a~~~~~-~~~~~~~~-~s~~~~~~~~~~~~Le~~la~~~g~~-~--~i~~~sG-~~a~~~~ 122 (410)
T PRK13392 49 TIWCSNDYLGMGQHPDVIGAMVDAL-DRYGAGAG-GTRNISGTSHPHVLLERELADLHGKE-S--ALLFTSG-YVSNDAA 122 (410)
T ss_pred EEEECCCccCCCCCHHHHHHHHHHH-HHcCCCCc-hhhhcccChHHHHHHHHHHHHHhCCC-C--EEEECcH-HHHHHHH
Confidence 45555555444 3777778776544 22211111 11111112334678899999999964 4 5777776 4577777
Q ss_pred HhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 120 GEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 120 ~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
+..+. ..+|+.|+++...|.++... ++..|+++..++.+. .+++ .+.++ ...
T Consensus 123 i~~l~~~~~g~~vi~~~~~h~s~~~~---~~~~g~~~~~~~~~d---~~~l-------------~~~l~--------~~~ 175 (410)
T PRK13392 123 LSTLGKLLPGCVILSDALNHASMIEG---IRRSGAEKQVFRHND---LADL-------------EEQLA--------SVD 175 (410)
T ss_pred HHHHhcCCCCCEEEEehhhhHHHHHH---HHHcCCeEEEEeCCC---HHHH-------------HHHHH--------hcc
Confidence 76553 24678888887788876543 344688887775431 1111 12222 112
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC---C---C--CCCCcEEE
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD---L---S--KYPVDFVV 270 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d---~---~--~~~~D~~~ 270 (508)
.++|++|++++++||||.+.|+++|.++|++ +|+++++|++|+.|..... + . ..++|+++
T Consensus 176 ~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~------------~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~ 243 (410)
T PRK13392 176 PDRPKLIAFESVYSMDGDIAPIEAICDLADR------------YNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQ 243 (410)
T ss_pred CCCCEEEEEeCCCCCCcccccHHHHHHHHHH------------cCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEE
Confidence 4578999999999999999999999999998 8999999999986542111 0 0 11468999
Q ss_pred EeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcC
Q 010538 271 MSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLT 350 (508)
Q Consensus 271 ~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g 350 (508)
.|++|.||.+ | |+++.++++++.++....+ ..+ ..+.+....+++.++++.+...
T Consensus 244 ~tlsK~~g~~-G-G~~~~~~~~~~~l~~~~~~---------------------~~~-s~~~~~~~~~a~~aaL~~~~~~- 298 (410)
T PRK13392 244 GTLAKAFGCL-G-GYIAASADLIDFVRSFAPG---------------------FIF-TTALPPAVAAGATAAIRHLKTS- 298 (410)
T ss_pred EEChHhhhcc-c-chhhcCHHHHHHHHHhCcc---------------------hhc-cCcCCHHHHHHHHHHHHHHhcC-
Confidence 9999999954 6 8888888887655432111 001 1223445577777888876653
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hhCCCeec
Q 010538 351 VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SLSGIQLR 429 (508)
Q Consensus 351 ~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~ 429 (508)
....+++.++++++++.|+++ ++++..+. ++++.+.++.. ....++.+.| +++||.++
T Consensus 299 -~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~---------~~~~~i~~~~~----~~~~~~~~~L~~~~GI~v~ 357 (410)
T PRK13392 299 -QTERDAHQDRVAALKAKLNAN-------GIPVMPSP---------SHIVPVMVGDP----TLCKAISDRLMSEHGIYIQ 357 (410)
T ss_pred -HHHHHHHHHHHHHHHHHHHHc-------CCCCCCCC---------CCEEEEEeCCH----HHHHHHHHHHHHhCCEEEe
Confidence 455677889999999999886 56554322 56766665431 1123467766 57899998
Q ss_pred cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 430 TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 430 ~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
++.....+. ..+++|++++.++|.+|+++++++|+++.+.
T Consensus 358 ~~~~p~~~~--------------------------------~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 358 PINYPTVPR--------------------------------GTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred eeCCCCCCC--------------------------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 754222211 1468999999999999999999999987653
No 109
>PLN02880 tyrosine decarboxylase
Probab=99.93 E-value=4.2e-24 Score=227.09 Aligned_cols=369 Identities=12% Similarity=-0.002 Sum_probs=240.5
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC-----ceEEEcCChH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD-----YKCIFTSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-----~~i~~t~g~t 113 (508)
...-||.+-.+++.++.++..++... +.+....+..++....+...+.+++++++|.+... -..++|+|+|
T Consensus 81 ~hP~f~~~~~~~~~~~~~lad~l~~~----~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs 156 (490)
T PLN02880 81 QSPNYFAYYPSNSSVAGFLGEMLSAG----LNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTAS 156 (490)
T ss_pred CCCCeeEeccCCCcHHHHHHHHHHHh----hccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccH
Confidence 34667888766666666665554433 22333334445556778888999999999997530 0378999999
Q ss_pred HHHHHHHhhcCC--------C--CCCeEEEecccccchHHHHHHHHhcCC---eEEEEccCC--ccCccccccccccccc
Q 010538 114 AALKLVGEAFPW--------S--HQSSYMYTMENHNSVLGIREYALSQGA---AAFAIDVEE--AVDNDGLSESLVTSTK 178 (508)
Q Consensus 114 ~al~~~~~~l~~--------~--~g~~vl~~~~~h~s~~~~~~~~~~~G~---~v~~v~~~~--~~~~~~l~~~~~~~~~ 178 (508)
+|+..++.+... . +.-+|++++..|.|+....+.+ |+ .++.||.+. .+.+
T Consensus 157 ~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l---Glg~~~v~~Vp~d~~~~~~m------------ 221 (490)
T PLN02880 157 EAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA---GIHPENCRLLKTDSSTNYAL------------ 221 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc---CCCHHHEEEeecCCCcCCcC------------
Confidence 998665543211 0 2236677888899988777765 65 478889874 3455
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP 258 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~ 258 (508)
|+++|+ ++|++....+..+.+|+.+...+.+|.+.|+++|.++|++ +|+|+|||++++.+...
T Consensus 222 ---d~~~L~--~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~------------~~iwlHVDaA~gg~~~~ 284 (490)
T PLN02880 222 ---APELLS--EAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS------------NGMWFHVDAAYAGSACI 284 (490)
T ss_pred ---CHHHHH--HHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH------------cCCEEEEehhhHHHHHh
Confidence 688888 6665332234557889999999999999999999999998 99999999999987654
Q ss_pred C-----CCCC-CCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEe-c-c--cchhhhhhccCccccccC
Q 010538 259 P-----DLSK-YPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAA-S-I--ADIDFVKRRQGVEELFED 328 (508)
Q Consensus 259 ~-----d~~~-~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~-~-~--~~~~~~~~~~~~~~~~~~ 328 (508)
. .+.. .++|+++.++|||++.|.|+|++++++... ...+...++..... . . ...++. ....+.
T Consensus 285 ~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~-l~~~~~~~~~Yl~~~~~~~~~~~~~~------~~~i~~ 357 (490)
T PLN02880 285 CPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNA-LIQSLSTNPEFLKNKASQANSVVDYK------DWQIPL 357 (490)
T ss_pred CHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHH-HHHHHccCHHHhcCccccccCCCChh------ccCcCC
Confidence 3 2333 268999999999988899999999996432 12222111110000 0 0 000000 011111
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD 408 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 408 (508)
|.. + ....++.+++.+...|+.++.++..++++++.+.|++. ++++++.++. .++++|+++...
T Consensus 358 ~rr-~-~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~------~~~el~~~~~--------~~iv~Fr~~~~~ 421 (490)
T PLN02880 358 GRR-F-RSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD------SRFEVVTPRI--------FSLVCFRLVPPK 421 (490)
T ss_pred CCc-c-cHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEecCCc--------eEEEEEEEeCCC
Confidence 111 1 12355556666555556666666669999999999887 4799998765 689999987421
Q ss_pred CC--ccCH--HHHHHHHhhCCCe-eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC
Q 010538 409 GS--WFGY--REVEKLASLSGIQ-LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS 483 (508)
Q Consensus 409 ~~--~~~~--~~l~~~L~~~gI~-v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 483 (508)
.. ..+. ..+.+.|.+.|-. +..... ....++|++++.++
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~------------------------------------~g~~~lR~~~~n~~ 465 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKIFISHTVL------------------------------------SGKYVLRFAVGAPL 465 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCEEEEEEEE------------------------------------CCEEEEEEEecCCC
Confidence 11 0010 2244455444444 433210 02468999999776
Q ss_pred C-HHHHHHHHHhhhhhhhhh
Q 010538 484 T-FEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 484 t-~eev~~l~~~~~~~~~~~ 502 (508)
| .+|++.+++.|.+..+.+
T Consensus 466 tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 466 TEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 6 599999999998876654
No 110
>PRK07324 transaminase; Validated
Probab=99.93 E-value=1.5e-23 Score=216.94 Aligned_cols=298 Identities=13% Similarity=0.067 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHcC-CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFN-ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~-~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~ 164 (508)
...+|+.+|++++ ++++ +|++|+|+++|+.+++.++ ..+|++|+++...|+++ ...++..|++++.+|++.+.
T Consensus 64 ~~~lr~~ia~~~~~~~~~--~vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~---~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 64 SPEFKEAVASLYQNVKPE--NILQTNGATGANFLVLYAL-VEPGDHVISVYPTYQQL---YDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred CHHHHHHHHHHhcCCChh--hEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhH---HHHHHHcCCEEEEEeccccc
Confidence 4578899999885 6777 8999999999999999998 68899999876555444 44556679999999987532
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
.. .+|+++++ +++ .++|++|++++++||||.++|.+++.++++ +|+++|+
T Consensus 138 ~~-------------~~d~~~l~--~~~------~~~~kli~i~~p~NPtG~~~~~~~l~~i~~---------~a~~~~~ 187 (373)
T PRK07324 138 GW-------------LPDLDELR--RLV------RPNTKLICINNANNPTGALMDRAYLEEIVE---------IARSVDA 187 (373)
T ss_pred CC-------------CCCHHHHH--HhC------CCCCcEEEEeCCCCCCCCCCCHHHHHHHHH---------HHHHCCC
Confidence 22 12678888 444 467899999999999999999544444433 2334999
Q ss_pred EEEEeccccCCCC---CCCCCC-CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhh
Q 010538 245 MVLIDAAKGCVTQ---PPDLSK-YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 245 ~vivD~a~~~g~~---~~d~~~-~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
++++|+++..-.. ..++.. .+..+++.|++|.|| .+| +||+++++++++.+......
T Consensus 188 ~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~-~~G~RiG~i~~~~~li~~~~~~~~~---------------- 250 (373)
T PRK07324 188 YVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYS-LPGIRVGWIAANEEVIDILRKYRDY---------------- 250 (373)
T ss_pred EEEEEccccccccCCCCCChhhccCCEEEEecchhhcC-CccceeEEEecCHHHHHHHHHHhCc----------------
Confidence 9999999753111 122221 133578889999998 557 79999988887766543110
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCc
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGS 398 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (508)
...++..+.+. +...+++...+ .++..++.+++.++.+.+.|++. +++....|.+ +.
T Consensus 251 -------~~~~~~~~~q~-~a~~~l~~~~~-~l~~~~~~~~~~~~~l~~~l~~~------~~~~~~~p~g--------g~ 307 (373)
T PRK07324 251 -------TMICAGVFDDM-LASLALEHRDA-ILERNRKIVRTNLAILDEWVAKE------PRVSYVKPKA--------VS 307 (373)
T ss_pred -------EEecCChHHHH-HHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHhcC------CCceEECCCc--------eE
Confidence 00112222222 22334432222 24566677777888888888775 3566665543 45
Q ss_pred eEEEEeeCCCCCccCHHHHHHH-HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 399 MVSFNLKRPDGSWFGYREVEKL-ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 399 ~v~~~~~~~~~~~~~~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
++++.++.. .+..++.+. ++++||.+.+|..+. .++++||
T Consensus 308 ~~~i~~~~~----~~~~~~~~~ll~~~gv~v~pg~~F~-----------------------------------~~~~iRi 348 (373)
T PRK07324 308 TSFVKLDVD----MPSEDFCLKLLKETGVLLVPGNRFD-----------------------------------LEGHVRI 348 (373)
T ss_pred EEEEEeCCC----CCHHHHHHHHHHhcCEEEECccccC-----------------------------------CCCeEEE
Confidence 566666532 223345555 578899999987542 1578999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~~ 500 (508)
|++. +.+.+...++.|+++++
T Consensus 349 s~~~--~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 349 GYCC--DTETLKKGLKKLSEFLR 369 (373)
T ss_pred EecC--CHHHHHHHHHHHHHHHH
Confidence 9984 67888888888877664
No 111
>PLN02721 threonine aldolase
Probab=99.93 E-value=4.2e-24 Score=219.16 Aligned_cols=335 Identities=13% Similarity=0.066 Sum_probs=213.7
Q ss_pred CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 40 GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 40 ~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
+.+-|..+..+.+++.+.+++.. .. .....+..+ ....++++.++++++.+. +++++++|+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~a~~~-~~-----~~~~~~~~~----~~~~~l~~~la~~~~~~~----~~~~~~Gs~a~~~~ 71 (353)
T PLN02721 6 RVVDLRSDTVTKPTDAMRAAMAN-AE-----VDDDVLGYD----PTALRLEEEMAKIFGKEA----ALFVPSGTMGNLIS 71 (353)
T ss_pred hhhhhhcccccCCCHHHHHHHHh-cc-----CCCcccCCC----HHHHHHHHHHHHHhCCce----eEEecCccHHHHHH
Confidence 34555556666667777776532 10 011111111 225778999999999863 45666667777777
Q ss_pred HhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC-C
Q 010538 120 GEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP-A 198 (508)
Q Consensus 120 ~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~-~ 198 (508)
+.++...+|++|++++..|.+.......+...|++++.+|.+.++.+ |+++++ +.+++... .
T Consensus 72 l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~i~~~~~~~ 134 (353)
T PLN02721 72 VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTM---------------DLDAIE--AAIRPKGDDH 134 (353)
T ss_pred HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCc---------------CHHHHH--HHHHhccCCC
Confidence 77763338999999988886655422244557999999988765555 678888 66532110 1
Q ss_pred CCCceEEEEeCC-CCCCccccCH---HHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC---CCCCC--CCCCcEE
Q 010538 199 GDAYNLFAFPSE-CNFSGSRFNL---DLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ---PPDLS--KYPVDFV 269 (508)
Q Consensus 199 ~~~t~lv~~~~~-~n~tG~~~~i---~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~---~~d~~--~~~~D~~ 269 (508)
.+++++|+++++ +|++|.++|. ++|.++|++ +|+++++|+++.++.. ..+.. ..++|++
T Consensus 135 ~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~------------~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~ 202 (353)
T PLN02721 135 FPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR------------HGLKLHIDGARIFNASVALGVPVHRLVKAADSV 202 (353)
T ss_pred CCcceEEEEeccccccCCccccHHHHHHHHHHHHH------------cCCEEEEEchhhhcchhhhCCCHHHHhhhCCEE
Confidence 157899999774 6778999995 566666765 9999999999876531 12221 2268999
Q ss_pred EEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc
Q 010538 270 VMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL 349 (508)
Q Consensus 270 ~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 349 (508)
+.|+||++++|.| |+++.++++++.+...... ..+++...+..+.. ++.-+.+
T Consensus 203 ~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~-~~~~l~~- 255 (353)
T PLN02721 203 SVCLSKGLGAPVG-SVIVGSKSFIRKAKRLRKT------------------------LGGGMRQVGVLAAA-ALVALQE- 255 (353)
T ss_pred EEecccccCCcee-eEEecCHHHHHhHHHHHHh------------------------cCCCeehhHHHHHH-HHHHHHH-
Confidence 9999999996644 4566777776654432110 01111111111111 1111111
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEE-ecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 350 TVPAICRHIASLGMYVRKVLLSLRHENGADVCTI-YGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 350 g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
..+. .++..++++++.+.|++++ ++++ +.++. +++++++++...+ .+...+.+.|.++||.+
T Consensus 256 ~~~~-~~~~~~~~~~l~~~L~~~~------~~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~L~~~gi~v 318 (353)
T PLN02721 256 NVPK-LEDDHKKAKLLAEGLNQIK------GLRVNVAAVE--------TNIVYFDITDGSR--ITAEKLCKSLEEHGVLL 318 (353)
T ss_pred HHHH-HHHHHHHHHHHHHHHHhCC------CcEEecCCcc--------ceEEEEEccCCcc--ccHHHHHHHHHhCCcEE
Confidence 1222 3344667889999998873 5654 33322 6789898864211 23346889999999999
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+++. .+++|++++++++.+|+++++++|++.+.
T Consensus 319 ~~~~---------------------------------------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 319 MPGN---------------------------------------SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ecCC---------------------------------------CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 8752 46899999999999999999999988654
No 112
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=2.2e-23 Score=216.94 Aligned_cols=345 Identities=12% Similarity=-0.002 Sum_probs=219.8
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~a 115 (508)
.+.+.|..+-... .|+.+.+++.+.... ....|.......++.+.+.+.+.+.+|. ++++ +|++|+|+++|
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~a 99 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLD-----GSNQYPPMMGLPELRQAVAAHYARFQGLDLDPET-EVMVTSGATEA 99 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc-----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcc-cEEEeCCcHHH
Confidence 4567777654333 355566655443221 1112222111223333333344333454 4431 69999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
+.+++.++ ..+|++|+++...|+.+.. .++..|++++.+|++. +..+ |++.++ +++
T Consensus 100 l~~~~~~~-~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~---------------~~~~l~--~~~-- 156 (387)
T PRK08912 100 LAAALLAL-VEPGDEVVLFQPLYDAYLP---LIRRAGGVPRLVRLEPPHWRL---------------PRAALA--AAF-- 156 (387)
T ss_pred HHHHHHHh-cCCCCEEEEeCCCchhhHH---HHHHcCCEEEEEecCcccCcC---------------CHHHHH--HHh--
Confidence 99999988 6789999999877766554 4456799999999864 2333 578888 544
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCC---CCC-CCC
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPD---LSK-YPV 266 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d---~~~-~~~ 266 (508)
.++++++++++++||||.++|.+++.++++ +|+++++++|+|++++. +..... +.. .+.
T Consensus 157 ----~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~---------~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK08912 157 ----SPRTKAVLLNNPLNPAGKVFPREELALLAE---------FCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRER 223 (387)
T ss_pred ----CccceEEEEeCCCCCcCcccCHHHHHHHHH---------HHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCc
Confidence 457899999999999999999777666555 44459999999999853 111111 111 245
Q ss_pred cEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN 344 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~ 344 (508)
++++.|++|.|| ++| +||++++++.++.+...... ...+.+.....++..++.
T Consensus 224 ~i~~~S~SK~~g-~~GlRiG~~~~~~~~~~~l~~~~~~------------------------~~~~~~~~~q~~~~~~l~ 278 (387)
T PRK08912 224 TVKIGSAGKIFS-LTGWKVGFVCAAPPLLRVLAKAHQF------------------------LTFTTPPNLQAAVAYGLG 278 (387)
T ss_pred eEEEeechhhcc-CcCceeEEEecCHHHHHHHHHHHhh------------------------ccccCChHHHHHHHHHHh
Confidence 799999999999 668 89999999887766543100 001112222333333332
Q ss_pred HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hh
Q 010538 345 LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SL 423 (508)
Q Consensus 345 ~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~ 423 (508)
.. +..+++.++++.+.++++.+.|++. ++++..+.+ +.++++.++.... ..+..++.+.| ++
T Consensus 279 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~g--------~~~l~~~l~~~~~-~~~~~~~~~~l~~~ 341 (387)
T PRK08912 279 KP-DDYFEGMRADLARSRDRLAAGLRRI-------GFPVLPSQG--------TYFLTVDLAPLGL-AEDDVAFCRRLVEE 341 (387)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCc--------ceEEEecccccCC-CCCHHHHHHHHHhc
Confidence 11 1124677888899999999999886 566665433 6788888864210 02233466665 67
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+||.+.+|..+.... ...+++|+|++. ..++++..++.|.++++
T Consensus 342 ~gV~v~pg~~f~~~~-------------------------------~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 342 AGVAAIPVSAFYEED-------------------------------PVTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred CCEEEecchhhCCCC-------------------------------CCCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 899999987553211 025799999995 57888888888776553
No 113
>PLN02187 rooty/superroot1
Probab=99.93 E-value=1.8e-23 Score=221.77 Aligned_cols=357 Identities=12% Similarity=0.056 Sum_probs=227.7
Q ss_pred chHHHHHHhhccC----CCCCeeeeCCCCC-----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHH
Q 010538 25 SIDQIRATEFKRL----ENGTVYLDHAGAT-----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLD 95 (508)
Q Consensus 25 ~~~~~r~~~f~~~----~~~~iyld~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~ 95 (508)
++..+....|... ++++++|..+-.. .+++.+.+++.+.... .....|... .....+|+.+|+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~----~G~~~lR~aiA~ 119 (462)
T PLN02187 48 TLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS----GKGNSYGPG----AGILPARRAVAD 119 (462)
T ss_pred hHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCC----CChHHHHHHHHH
Confidence 4555544233322 2679999988443 2244565655443321 111122111 124557777777
Q ss_pred Hc------CCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccc
Q 010538 96 YF------NASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGL 169 (508)
Q Consensus 96 ~~------~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l 169 (508)
++ +++++ +|++|+|+++|+.+++.++ .++|+.|+++...|+.+... ++..|++++.+++......
T Consensus 120 ~~~~~~~~~~~~~--~I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~~y~~~---~~~~g~~~~~~~l~~~~~~--- 190 (462)
T PLN02187 120 YMNRDLPHKLTPE--DIFLTAGCNQGIEIVFESL-ARPNANILLPRPGFPHYDAR---AAYSGLEVRKFDLLPEKEW--- 190 (462)
T ss_pred HHHHhcCCCCCcc--cEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCccHHHH---HHHcCCEEEEEeCccccCC---
Confidence 76 36787 8999999999999999999 68999999999888766443 4456999999987432111
Q ss_pred ccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 170 SESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
..|+++++ +++ +++++++++++++||||.+++.+++.++++ +|+++|++||+|
T Consensus 191 ----------~~d~~~l~--~~~------~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~---------~a~~~~i~iI~D 243 (462)
T PLN02187 191 ----------EIDLEGIE--AIA------DENTVAMVVINPNNPCGNVYSHDHLKKVAE---------TARKLGIMVISD 243 (462)
T ss_pred ----------ccCHHHHH--Hhc------CCCcEEEEEeCCCCCCCCccCHHHHHHHHH---------HHHHCCCEEEEe
Confidence 12688888 544 457899999999999999999777776665 455699999999
Q ss_pred ccccC----CCCCCCCCCC---CCcEEEEeccccccCCCc--ceEEEEe-ch-h---HhhhccccccCceEEecccchhh
Q 010538 250 AAKGC----VTQPPDLSKY---PVDFVVMSFYKIFGYPTG--LGALIMR-ND-A---AKLLKNTYFSGGTVAASIADIDF 315 (508)
Q Consensus 250 ~a~~~----g~~~~d~~~~---~~D~~~~S~~K~~g~P~G--~G~l~~~-~~-~---~~~l~~~~~g~~~~~~~~~~~~~ 315 (508)
+++.. +....++... ..-+++.|++|.|+.| | +||+++. ++ . ++.+....
T Consensus 244 E~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p-GlRiG~~v~~~p~~~~~~~~~~~~~~--------------- 307 (462)
T PLN02187 244 EVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP-GWKIGWIALNDPEGVFETTKVLQSIK--------------- 307 (462)
T ss_pred ccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc-cceeEEEEecCchhHHHHHHHHHHHH---------------
Confidence 99864 2111222222 1247788999998844 7 8999984 32 2 12222210
Q ss_pred hhhccCccccccC-CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe-cCCCCCccc
Q 010538 316 VKRRQGVEELFED-GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY-GTYTSEVSY 393 (508)
Q Consensus 316 ~~~~~~~~~~~~~-gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~-~~~~~~~~~ 393 (508)
..+.. ..++.....++.++++......++..++.+.+.++++.+.|++++ ++..+ .|.+
T Consensus 308 --------~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~------~~~~~~~P~g----- 368 (462)
T PLN02187 308 --------QNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIP------CVVCPKKPES----- 368 (462)
T ss_pred --------HhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCC------CCcCCCCCCE-----
Confidence 00111 123444455555555421112367778888889999999998762 33222 2322
Q ss_pred CCCCceEEEEeeCCCCCcc-CH-HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCC
Q 010538 394 HDTGSMVSFNLKRPDGSWF-GY-REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKP 471 (508)
Q Consensus 394 ~~~~~~v~~~~~~~~~~~~-~~-~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 471 (508)
+++++++++......+ +. ..+.+++.++||.+.+|..|. .
T Consensus 369 ---g~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg-----------------------------------~ 410 (462)
T PLN02187 369 ---CTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG-----------------------------------L 410 (462)
T ss_pred ---eEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC-----------------------------------C
Confidence 6888887752110001 12 234566789999999987542 1
Q ss_pred CceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 472 TGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 472 ~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.+++||+++. ..++++..++.|.++++
T Consensus 411 ~~~iRis~~~--~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 411 KNWMRITIGV--EAHMLEDALERLKGFCT 437 (462)
T ss_pred CCeEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 5799999984 57888888888887764
No 114
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=215.44 Aligned_cols=327 Identities=13% Similarity=0.045 Sum_probs=225.9
Q ss_pred CCeeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 40 GTVYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 40 ~~iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
..+.|+.+..+ .+++.+++++.+.. ..... |... ....+|+++|++++++++ +|++|+|+++++.+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~-~~~~~-----Y~~~-----~~~~Lr~~ia~~~~~~~~--~I~it~G~~~~l~~ 99 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAA-AEIWK-----YGDP-----ENHDLRHALAAHHGVAPE--NIMVGEGIDGLLGL 99 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHH-HHhhc-----CCCC-----ccHHHHHHHHHHhCCCHH--HEEEcCCHHHHHHH
Confidence 35688877644 34666777665432 22111 1111 146789999999999988 89999999999999
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
++.++ .++|+.|++....||.+.... +..|.+++.+|.+.+. + |++.+. +.+ .
T Consensus 100 ~~~~~-~~~gd~vlv~~p~y~~~~~~~---~~~g~~~~~vp~~~~~-~---------------~~~~l~--~~~-----~ 152 (369)
T PRK08153 100 IVRLY-VEPGDPVVTSLGAYPTFNYHV---AGFGGRLVTVPYRDDR-E---------------DLDALL--DAA-----R 152 (369)
T ss_pred HHHHh-cCCCCEEEECCCcchHHHHHH---HHcCCeEEEeeCCCCC-C---------------CHHHHH--HHh-----c
Confidence 99988 578999999887777665443 3468999999986543 2 466665 332 1
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCCCCC-CCCcEEEEecc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPDLSK-YPVDFVVMSFY 274 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d~~~-~~~D~~~~S~~ 274 (508)
.++++++++++++||||.++|.+++.++++. |+ ++++||+|++++.-. ....+.. .+..+++.|++
T Consensus 153 ~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~---------~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfS 222 (369)
T PRK08153 153 RENAPLVYLANPDNPMGSWHPAADIVAFIEA---------LP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFS 222 (369)
T ss_pred ccCCcEEEEeCCCCCCCCCCCHHHHHHHHHh---------CC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecch
Confidence 3578999999999999999999999999984 54 489999999976311 1112221 12347899999
Q ss_pred ccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChH
Q 010538 275 KIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVP 352 (508)
Q Consensus 275 K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 352 (508)
|.+| .+| +||++++++.++.+..... ..+.+.....++.++++- ..-++
T Consensus 223 K~~g-~~GlRiG~~v~~~~~~~~l~~~~~--------------------------~~~~s~~~q~~~~~~l~~--~~~~~ 273 (369)
T PRK08153 223 KAYG-LAGARVGYAIGAPGTIKAFDKVRN--------------------------HFGMNRIAQAAALAALKD--QAYLA 273 (369)
T ss_pred Hhcc-CcchheeeeecCHHHHHHHHHhhc--------------------------CCCCCHHHHHHHHHHhcC--HHHHH
Confidence 9998 447 7999999888766553310 112344555555555541 11256
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeec-cC
Q 010538 353 AICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLR-TG 431 (508)
Q Consensus 353 ~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~-~g 431 (508)
...+++.+.++++.+.|++. ++.++ |.. ++++++.++.. . .....+.+.|.++||.++ +|
T Consensus 274 ~~~~~~~~~r~~~~~~L~~~-------g~~~~-p~~--------~~f~~~~~~~~-~--~~a~~l~~~l~~~Gi~v~~p~ 334 (369)
T PRK08153 274 EVVGKIAAARDRIAAIARAN-------GLTPL-PSA--------TNFVAIDCGRD-G--AFARAVLDGLIARDIFVRMPG 334 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHC-------CCccC-CCc--------CcEEEEECCCC-c--ccHHHHHHHHHHCCeEEeeCC
Confidence 67788888888898888875 45433 322 67888876421 1 123457788888999996 43
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
.. ..++++|+|++ +.+|+++++++++++++..|
T Consensus 335 ~~------------------------------------~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 335 VA------------------------------------PLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred CC------------------------------------CCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 21 01468999998 89999999999999887554
No 115
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.93 E-value=4.1e-24 Score=202.76 Aligned_cols=396 Identities=15% Similarity=0.138 Sum_probs=290.0
Q ss_pred cCCCCCCCCchHHHHHHhhccC---------------CCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhh
Q 010538 16 DYGYPNAPKSIDQIRATEFKRL---------------ENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISL 80 (508)
Q Consensus 16 ~~~~~~~~~~~~~~r~~~f~~~---------------~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 80 (508)
++++.. .++.+|+ +|-.. +.+.|||..++.+.+|+.+.+.+ ++-++.|..-...++..|.
T Consensus 32 ~Ld~~d---~l~~~Rd-~F~iPk~~~lp~~d~sLv~~d~~~iYlcGNSLGLmPK~t~~~~-~~eLDkWak~av~gH~~Gk 106 (465)
T KOG3846|consen 32 ELDGSD---YLESLRD-EFNIPKFKSLPDADPSLVSDDKPVIYLCGNSLGLMPKSTRNSI-NAELDKWAKCAVEGHFKGK 106 (465)
T ss_pred hcCcch---hHHHHHH-HhcCCccccCCCCCccccCCCCCeEEEeccccccCchhhHhHH-HHHHHHHHhhhhhcccccc
Confidence 345555 6778888 76332 16799999999999888876554 3333332111111111111
Q ss_pred -hhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCC---CCeEEEecccccchHHHHH-HHHhcCCeE
Q 010538 81 -ATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSH---QSSYMYTMENHNSVLGIRE-YALSQGAAA 155 (508)
Q Consensus 81 -~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~---g~~vl~~~~~h~s~~~~~~-~~~~~G~~v 155 (508)
.+...-+-....++.++|++.+ +|.+.++-|..+..++.++ .+| .-+|+.....+||-...++ .++-.|..+
T Consensus 107 vPW~~~De~il~l~~~iVGA~e~--EvavmNsLTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~ 183 (465)
T KOG3846|consen 107 VPWVSIDEPILPLLAPIVGAQEN--EVAVMNSLTVNLHSLLISF-YKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISP 183 (465)
T ss_pred cceeecchhhhhhhhhhccCCch--hhhhHhhhhhHHHHHHHHh-cCCcchhhhhhhccCCCCchHHHHHhhhhhcCCCh
Confidence 1223344567889999999988 8999999999999888888 333 4578888888998655444 455566553
Q ss_pred E----EE-ccCCcc--CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHc
Q 010538 156 F----AI-DVEEAV--DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKK 228 (508)
Q Consensus 156 ~----~v-~~~~~~--~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~ 228 (508)
. .+ |.++.. +.+++ ++.++ + .++...+|+++-++..||..+++.+|...-+
T Consensus 184 e~sm~~iePREGEetlRteDI-------------Ld~IE------k---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq 241 (465)
T KOG3846|consen 184 ENSMIQIEPREGEETLRTEDI-------------LDTIE------K---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQ 241 (465)
T ss_pred HHheEEecccccccchhHHHH-------------HHHHH------h---cCCeEEEEEeecceeecccccchhhhhhccc
Confidence 2 23 223322 22222 34444 1 2678899999999999999999999997777
Q ss_pred CCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccccc-CCCcceEEEEechhHhhhccccccCceEE
Q 010538 229 NPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFG-YPTGLGALIMRNDAAKLLKNTYFSGGTVA 307 (508)
Q Consensus 229 ~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g-~P~G~G~l~~~~~~~~~l~~~~~g~~~~~ 307 (508)
. .|++|=.|-+|++|-.|+-+..|++||.|.+.+|.++ ||+|+|.+++..+......|...||....
T Consensus 242 ~------------kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~ 309 (465)
T KOG3846|consen 242 F------------KGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHD 309 (465)
T ss_pred C------------CCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCC
Confidence 6 7999999999999999999999999999999999544 68889999999999888889888875432
Q ss_pred ecc-cchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCC-----CCceE
Q 010538 308 ASI-ADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHEN-----GADVC 381 (508)
Q Consensus 308 ~~~-~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~-----~~~~~ 381 (508)
.+. -.++-.....++.-+|+...|++...+++..+++...+..+.++++|..-|+.|+...++...+.. .++-+
T Consensus 310 ~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~ 389 (465)
T KOG3846|consen 310 PSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFF 389 (465)
T ss_pred cchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeE
Confidence 221 011111123356778888999999999999999999998899999999999999888877654421 34567
Q ss_pred EEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccC
Q 010538 382 TIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCW 461 (508)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 461 (508)
.+++|... ++++..+++.+.... .++.+.|.++|++...
T Consensus 390 ~IiTP~~~----~erGcQLsl~Fssp~------~~vfqeL~krGv~~Dk------------------------------- 428 (465)
T KOG3846|consen 390 TIITPTST----DERGCQLSLYFSSPT------PKVFQELHKRGVIGDK------------------------------- 428 (465)
T ss_pred EEeCCccc----ccccceEEEEeCCCc------hHHHHHHHHcCeeccc-------------------------------
Confidence 88888765 577999998886432 2489999999998432
Q ss_pred CCccccCCCCCceEEEec-CCCCCHHHHHHHHHhhhhhhhhh
Q 010538 462 DDNDIIHGKPTGAIRVSF-GYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 462 ~~~~~~~~~~~~~iRis~-~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+.++.||+++ +.|||..||.+++.++.+.+.-+
T Consensus 429 --------R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 429 --------RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred --------cCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 2478999995 58999999999999998877654
No 116
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=3.4e-23 Score=212.92 Aligned_cols=323 Identities=13% Similarity=0.077 Sum_probs=216.4
Q ss_pred CCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 40 GTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 40 ~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
+.+.|+.+.... +++.+.+++.+.. .... .|+ . . ...++|+++|++++++++ +|++|+|+++++.+
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~-~~~~-----~Y~-~---~-~~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~ 86 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENL-DKLV-----EYP-D---P-DYLELRKRIASFEQLDLE--NVILGNGATELIFN 86 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-Hhhh-----cCC-C---c-cHHHHHHHHHHHhCCChh--hEEECCCHHHHHHH
Confidence 357777654332 3556666554432 2111 121 1 1 146789999999999998 89999999999999
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
++.++ .+ +.|++....|+ .+...++..|++++.+|.+.+..+ ..| +++. +.+
T Consensus 87 ~~~~~--~~-~~v~i~~P~y~---~~~~~~~~~g~~~~~~~~~~~~~~-------------~~d-~~~~--~~~------ 138 (354)
T PRK06358 87 IVKVT--KP-KKVLILAPTFA---EYERALKAFDAEIEYAELTEETNF-------------AAN-EIVL--EEI------ 138 (354)
T ss_pred HHHHh--CC-CcEEEecCChH---HHHHHHHHcCCeeEEEeCccccCC-------------Ccc-HHHH--Hhh------
Confidence 99987 33 46776664444 444555667999999998643322 014 3333 222
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCC----CCCCCCcEEEE
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPD----LSKYPVDFVVM 271 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d----~~~~~~D~~~~ 271 (508)
.++++++++++++||||.+++.+++.++++ +|+++|+++|+|+++..-. .+.. +...+--+++.
T Consensus 139 ~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~---------~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~ 209 (354)
T PRK06358 139 KEEIDLVFLCNPNNPTGQLISKEEMKKILD---------KCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIR 209 (354)
T ss_pred ccCCCEEEEeCCCCCCCCccCHHHHHHHHH---------HHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEE
Confidence 245799999999999999999887777766 4566999999999975311 1111 11112338889
Q ss_pred eccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 272 SFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 272 S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
|++|.|| .+| +||++++ +.+++.+..... ..+.+.....++..+++. .
T Consensus 210 S~SK~~g-l~G~RiG~lv~~~~~~~~~~~~~~~--------------------------~~~~~~~~q~~~~~~l~~--~ 260 (354)
T PRK06358 210 AFTKFFA-IPGLRLGYGLTSNKNLAEKLLQMRE--------------------------PWSINTFADLAGQTLLDD--K 260 (354)
T ss_pred echhhcc-CcchhheeeecCCHHHHHHHHHhCC--------------------------CCcchHHHHHHHHHHhcc--H
Confidence 9999998 547 8999985 455555543311 122333344444444432 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
..+++..+.+++.++++.+.|+++ +++.+..+. ++++++++++. .++.+.|.++||.+
T Consensus 261 ~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~~~---------g~f~~~~~~~~-------~~~~~~l~~~gI~v 318 (354)
T PRK06358 261 EYIKKTIQWIKEEKDFLYNGLSEF------KGIKVYKPS---------VNFIFFKLEKP-------IDLRKELLKKGILI 318 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC------CCcEEcCCc---------ceEEEEEcCch-------HHHHHHHHHCCeEE
Confidence 124667788888899999999876 366666442 67888888642 24778888899999
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
++|..+.. ...+++||+++ +.++.+++++++.+++
T Consensus 319 ~~~~~f~~---------------------------------~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 319 RSCSNYRG---------------------------------LDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred EECCCCCC---------------------------------CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 99875521 12578999998 9999999999998875
No 117
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=1.1e-23 Score=220.38 Aligned_cols=339 Identities=13% Similarity=0.029 Sum_probs=219.1
Q ss_pred CCCeeeeCCCCC-----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC------CCCCceEE
Q 010538 39 NGTVYLDHAGAT-----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA------SMKDYKCI 107 (508)
Q Consensus 39 ~~~iyld~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~------~~~~~~i~ 107 (508)
.+++.|..+-.+ ++++.+.+++.+.+ ..... ..|.. ......+|+.++++++. +++ +|+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l-~~~~~---~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~--~ii 100 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDAL-RSGKF---NGYAP----SVGALAAREAVAEYLSSDLPGKLTAD--DVV 100 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHH-hcCCC---CCCCC----CCCCHHHHHHHHHHHHhhcCCCCCHH--HEE
Confidence 468888887543 55666666654433 21111 11211 12256678888888874 556 899
Q ss_pred EcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc--cCccccccccccccccccchhh
Q 010538 108 FTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA--VDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 108 ~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~--~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
+|+|+|+|+.+++.++ ..+|++|+++...|+.+ ...++..|++++.++.+.+ ..+ |++.
T Consensus 101 ~t~G~t~al~~~~~~l-~~~gd~Vlv~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~---------------d~~~ 161 (403)
T TIGR01265 101 LTSGCSQAIEICIEAL-ANPGANILVPRPGFPLY---DTRAAFSGLEVRLYDLLPEKDWEI---------------DLDG 161 (403)
T ss_pred EecChHHHHHHHHHHh-CCCCCEEEEeCCCchhH---HHHHHHcCCEEEEecCCcccCCcc---------------CHHH
Confidence 9999999999999998 47899999888666544 4455667999999887532 233 6788
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC----CCCCC
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT----QPPDL 261 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~----~~~d~ 261 (508)
++ +++ .++++++++++++||||.++|.+++.++++ +|+++|+++|+|++++.-. ....+
T Consensus 162 l~--~~~------~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (403)
T TIGR01265 162 LE--ALA------DEKTVAIVVINPSNPCGSVFSRDHLQKIAE---------VARKLGIPIIADEIYGHMVFGDAPFIPM 224 (403)
T ss_pred HH--HHh------CcCccEEEEecCCCCCCCCCCHHHHHHHHH---------HHHHCCCEEEEEccccccccCCCCccch
Confidence 88 444 457899999999999999999555555544 3444999999999986311 11222
Q ss_pred CCCC---CcEEEEeccccccCCCc--ceEEEEec--h-----hHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 262 SKYP---VDFVVMSFYKIFGYPTG--LGALIMRN--D-----AAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 262 ~~~~---~D~~~~S~~K~~g~P~G--~G~l~~~~--~-----~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
..+. .-+++.|++|.|+.| | +||+++++ + +++.+.... . . ..
T Consensus 225 ~~~~~~~~vi~~~S~SK~~~~p-GlRiG~~v~~~~~~~~~~~~~~~~~~~~-----------------------~-~-~~ 278 (403)
T TIGR01265 225 ASFASIVPVLSLGGISKRWVVP-GWRLGWIIIHDPHGIFRDTVLQGLKNLL-----------------------Q-R-IL 278 (403)
T ss_pred hhhccCCcEEEEeecccccCCC-cceEEEEEEeCchhhhHHHHHHHHHHHh-----------------------h-h-hc
Confidence 2221 237788999988746 6 89999853 2 222121110 0 0 01
Q ss_pred CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC-
Q 010538 330 TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD- 408 (508)
Q Consensus 330 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 408 (508)
.++.....++..+++...+..+++..+++.+.++++.+.|+.. +++++..|.+ +++++++++...
T Consensus 279 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~~--------g~f~~~~~~~~~~ 344 (403)
T TIGR01265 279 GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDI------PGLVCPKPEG--------AMYLMVKLELELF 344 (403)
T ss_pred CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC------CCceecCCCc--------eeEEEEecccccc
Confidence 2233444444445542112235677788888889999999876 3566554543 789999886421
Q ss_pred CCccCHHHHHHH-HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHH
Q 010538 409 GSWFGYREVEKL-ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFED 487 (508)
Q Consensus 409 ~~~~~~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ee 487 (508)
....+..++.+. ++++||.+.+|..|.. .+++|||++. ..++
T Consensus 345 ~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----------------------------------~~~iRis~~~--~~~~ 387 (403)
T TIGR01265 345 PEIKDDVDFCEKLVREESVICLPGSAFGL-----------------------------------PNWVRITITV--PESM 387 (403)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCccccCC-----------------------------------CCeEEEEecC--CHHH
Confidence 001133456565 5788999999875421 5789999994 5777
Q ss_pred HHHHHHhhhhhhh
Q 010538 488 AKVNRCSSFDFVN 500 (508)
Q Consensus 488 v~~l~~~~~~~~~ 500 (508)
++..++.|+++++
T Consensus 388 l~~~l~~l~~~~~ 400 (403)
T TIGR01265 388 LEEACSRIKEFCE 400 (403)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776653
No 118
>PRK09082 methionine aminotransferase; Validated
Probab=99.93 E-value=1.6e-23 Score=217.88 Aligned_cols=342 Identities=13% Similarity=0.058 Sum_probs=225.9
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCC-ceEEEcCChHHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKD-YKCIFTSGATAAL 116 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-~~i~~t~g~t~al 116 (508)
.+.+.|..+..... ++.+.+++.+ ..... ...|........+.+++.+.+.++++.+.+. .+|++|+|+++|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~-~~~~~----~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAY-AMAAG----HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHH-HHHcC----CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 56788887654433 4555555433 32211 1122222223456667777777777874321 1699999999999
Q ss_pred HHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 117 KLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 117 ~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
.+++.++ ..+|++|+++...|+++..+.+. .|.++..+|.+. ...+ |+++++ +.+
T Consensus 105 ~~~~~~~-~~~gd~Vli~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~---------------d~~~l~--~~~--- 160 (386)
T PRK09082 105 FAAILAL-VRPGDEVIVFDPSYDSYAPAIEL---AGGRAVRVALQPPDFRV---------------DWQRFA--AAI--- 160 (386)
T ss_pred HHHHHHH-cCCCCEEEEeCCCchhhHHHHHH---cCCEEEEEecCcccccC---------------CHHHHH--Hhc---
Confidence 9999998 67899999999888877655543 599999999864 2233 678888 554
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC----CCCCCCC---C-CCCc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV----TQPPDLS---K-YPVD 267 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g----~~~~d~~---~-~~~D 267 (508)
.+++++|++++++||||.+++.+++.++++ +|+++|+++|+|.+++.. .....+. . .+..
T Consensus 161 ---~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~---------~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~ 228 (386)
T PRK09082 161 ---SPRTRLIILNTPHNPSGTVWSAADMRALWQ---------LIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERA 228 (386)
T ss_pred ---CccceEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcE
Confidence 457899999999999999988777666655 455699999999998531 1122222 1 2356
Q ss_pred EEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
+++.|++|.|| .+| +||+++++++++.+..... ....+.+.....++...++.
T Consensus 229 i~~~S~SK~~~-~~G~RiG~iv~~~~l~~~~~~~~~------------------------~~~~~~~~~~q~~~~~~l~~ 283 (386)
T PRK09082 229 FVVSSFGKTYH-VTGWKVGYCVAPAALSAEFRKVHQ------------------------YNTFTVNTPAQLALADYLRA 283 (386)
T ss_pred EEEeechhhcc-chhhhhhhhhCCHHHHHHHHHHHh------------------------hhcCCCChHHHHHHHHHHhC
Confidence 88999999998 447 8999999888776654310 01112333333333334331
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH-HhhC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL-ASLS 424 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-L~~~ 424 (508)
.+..++++++.+.+.++++.+.|++. ++++..+.+ +.++++++++.++ ++..++.+. ++++
T Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~g--------~~~~~~~~~~~~~--~~~~~~~~~l~~~~ 345 (386)
T PRK09082 284 -EPEHYLELPAFYQAKRDRFRAALANS-------RFKLLPCEG--------TYFQLVDYSAISD--LDDVEFCQWLTREH 345 (386)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCe--------eEEEEEeccccCC--CCHHHHHHHHHHhC
Confidence 12235667778889999999999875 566554432 6778888864211 234457665 4788
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
||.+.+|..|.... ...+++|+|++. +.++++..++.|++
T Consensus 346 ~v~v~pg~~f~~~~-------------------------------~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 346 GVAAIPLSVFYADP-------------------------------FPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred CEEEeCcHHhCCCC-------------------------------CCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 99999987442210 125789999985 68888888887764
No 119
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=218.41 Aligned_cols=346 Identities=13% Similarity=0.039 Sum_probs=226.8
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~a 115 (508)
++.+.|..+..... ++.+.+++.+ ..... ...|........+.+.+.+.+++.+|. +++ +|++|+|+++|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~-~~~~~----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~--~i~~t~G~~~a 105 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVA-AIERG----ETKYTLVNGTPALRKAIIAKLERRNGLHYADN--EITVGGGAKQA 105 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHH-HHHcC----CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHH
Confidence 56788887765544 4444444433 33211 111222122345566777777777776 566 89999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+.+++.++ ..+|+.|++++..|+++..... ..+..++.++.+.+... ..|++.++ +.+
T Consensus 106 l~~~~~~~-~~~gd~vl~~~p~y~~y~~~~~---~~~~~~~~v~~~~~~~~-------------~~~~~~l~--~~~--- 163 (402)
T PRK06107 106 IFLALMAT-LEAGDEVIIPAPYWVSYPDMVL---ANDGTPVIVACPEEQGF-------------KLTPEALE--AAI--- 163 (402)
T ss_pred HHHHHHHh-cCCCCEEEEecCCCcCHHHHHH---HcCCEEEEecCCcccCC-------------CCCHHHHH--hhc---
Confidence 99999887 6889999999877777654433 34677777877532221 11578888 554
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC-CeEEEEeccccC----CCCCCCCCCC-----C
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG-RWMVLIDAAKGC----VTQPPDLSKY-----P 265 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~-g~~vivD~a~~~----g~~~~d~~~~-----~ 265 (508)
.++++++++++++||||.++|.+++.++++ +|+++ ++++|+|.+++. +.....+... +
T Consensus 164 ---~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~---------~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 164 ---TPRTRWLILNAPSNPTGAVYSRAELRALAD---------VLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred ---CcCceEEEEECCCCCCCcCcCHHHHHHHHH---------HHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 357899999999999999999888877776 45557 999999998852 1111222111 2
Q ss_pred CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGF 343 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 343 (508)
.-+++.|++|.|+ ++| +||+++++++++.+..... ....+++.....++..++
T Consensus 232 ~vi~~~S~SK~~~-~pGlRiG~~~~~~~~~~~~~~~~~------------------------~~~~~~s~~~q~~~~~~l 286 (402)
T PRK06107 232 RVLVTNGVSKTYA-MTGWRIGYAAGPADLIAAINKLQS------------------------QSSSCPSSISQAAAAAAL 286 (402)
T ss_pred CEEEEeccchhhc-CcccceeeeecCHHHHHHHHHHHH------------------------hcccCCChHHHHHHHHHh
Confidence 3577889999998 557 7999999988776654311 011223444444444444
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC------CCCc-cCHHH
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP------DGSW-FGYRE 416 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~-~~~~~ 416 (508)
+-- +..++..++++.+.++.+.+.|++. +++.+..+.+ +.++|+++++. .+.. .+..+
T Consensus 287 ~~~-~~~~~~~~~~~~~~~~~~~~~L~~~------~g~~~~~p~g--------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (402)
T PRK06107 287 NGD-QSFVTESVAVYKQRRDYALALLNAI------PGLSCLVPDG--------AFYLYVNCAGLIGKTTPEGKVLETDQD 351 (402)
T ss_pred cCC-hHHHHHHHHHHHHHHHHHHHHHhcC------CCCcccCCCc--------ceEEeeecccccccccccccCCCCHHH
Confidence 311 1225667778888888899999876 3566654443 67788877421 1100 12233
Q ss_pred H-HHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 417 V-EKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 417 l-~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
+ .++++++||.+.+|..|.. .+++|+|++. +.|++++.++.|
T Consensus 352 ~~~~l~~~~gv~v~pg~~Fg~-----------------------------------~~~iRis~~~--~~e~l~~~l~~l 394 (402)
T PRK06107 352 VVLYLLDSAGVAVVQGTAYGL-----------------------------------SPYFRLSIAT--SLETLEEACARI 394 (402)
T ss_pred HHHHHHHhCCEEEeCccccCC-----------------------------------CCeEEEEeCC--CHHHHHHHHHHH
Confidence 4 4566789999999875421 4789999994 799999999998
Q ss_pred hhhhhhh
Q 010538 496 FDFVNFS 502 (508)
Q Consensus 496 ~~~~~~~ 502 (508)
+++++.+
T Consensus 395 ~~~l~~~ 401 (402)
T PRK06107 395 ERAVAAL 401 (402)
T ss_pred HHHHHhc
Confidence 8877543
No 120
>PRK09148 aminotransferase; Validated
Probab=99.92 E-value=4e-23 Score=216.21 Aligned_cols=339 Identities=12% Similarity=0.045 Sum_probs=215.4
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCC-CccchhhhhhHHHHHHHHHHHHHc----CC--CCCCceEEEcC
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPH-SQSDISLATCDIVRAAREQVLDYF----NA--SMKDYKCIFTS 110 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~~i~~t~ 110 (508)
++.+.|+.+.... +++...+++.+.. . ++. ..|.... ....+|+.+|+++ |. ++++ +|++|+
T Consensus 30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~-~----~~~~~~Y~~~~----G~~~lr~aia~~~~~~~g~~~~~~~-~I~it~ 99 (405)
T PRK09148 30 ADIIDLGMGNPDLPTPQHIVDKLCETA-Q----DPRTHRYSASK----GIPGLRRAQAAYYARRFGVKLNPDT-QVVATL 99 (405)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHH-c----CcccCCCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCC-cEEEcC
Confidence 5678888765543 3455656544322 1 111 1222211 1344556666555 53 4431 599999
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCc-cccccccccccccccchhhhhcC
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDN-DGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~-~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
|+++++.+++.++ ..+|+.|+++...|+.+.... +..|+++..+|++.++.. + ++++..
T Consensus 100 G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~---~~~g~~v~~v~~~~~~~~~~--------------~l~~~~-- 159 (405)
T PRK09148 100 GSKEGFANMAQAI-TAPGDVILCPNPSYPIHAFGF---IMAGGVIRSVPAEPDEEFFP--------------ALERAV-- 159 (405)
T ss_pred ChHHHHHHHHHHh-cCCCCEEEEcCCCCcccHHHH---HhcCCEEEEEeCCCCCCCcc--------------CHHHHH--
Confidence 9999999999998 678999999998887765444 346999999998654322 1 223322
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC---C-CCCCCCCC-
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV---T-QPPDLSKY- 264 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g---~-~~~d~~~~- 264 (508)
....++++++++++++||||.++|.+++.++++ +|+++|++||+|+++..- . ....+...
T Consensus 160 ------~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~---------~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~ 224 (405)
T PRK09148 160 ------RHSIPKPIALIVNYPSNPTAYVADLDFYKDVVA---------FAKKHDIIILSDLAYSEIYFDGNPPPSVLQVP 224 (405)
T ss_pred ------hhccccceEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHcCeEEEEeccchhhhcCCCCCCChhhCC
Confidence 112467899999999999999999977666655 455599999999998631 1 11222211
Q ss_pred ---CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHH
Q 010538 265 ---PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASI 339 (508)
Q Consensus 265 ---~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 339 (508)
+..+++.|++|.+| .+| +||+++++++++.+..... ....+.+.+...++
T Consensus 225 ~~~~~~i~~~SfSK~~~-~pGlR~G~~v~~~~~i~~l~~~~~------------------------~~~~~~~~~~q~~~ 279 (405)
T PRK09148 225 GAKDVTVEFTSMSKTFS-MAGWRMGFAVGNERLIAALTRVKS------------------------YLDYGAFTPIQVAA 279 (405)
T ss_pred CccCcEEEEeccccccC-CcchheeeeeCCHHHHHHHHHHHH------------------------HhccCCChHHHHHH
Confidence 23467899999998 557 8999999888776654310 00111222333333
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHH
Q 010538 340 RHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEK 419 (508)
Q Consensus 340 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 419 (508)
..+++.- +..++..++++++.++++.+.|++. ++.+..|.+ +.++|+++++.... ++..++.+
T Consensus 280 ~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~~~~p~~--------g~f~~~~l~~~~~~-~~~~~~~~ 342 (405)
T PRK09148 280 TAALNGP-QDCIAEMRELYKKRRDVLVESFGRA-------GWDIPPPAA--------SMFAWAPIPEAFRH-LGSLEFSK 342 (405)
T ss_pred HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHc-------CCccCCCCe--------eEEEEEECCCccCC-CCHHHHHH
Confidence 3344311 2235777888899999999999875 455444433 67899988642110 12234555
Q ss_pred H-HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 420 L-ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 420 ~-L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
. ++++||.+.+|..+... ..+++||++. .+.+++...++.+.++
T Consensus 343 ~ll~~~gV~v~pg~~f~~~---------------------------------~~~~~Ri~~~--~~~~~l~~al~~l~~~ 387 (405)
T PRK09148 343 LLVEKADVAVAPGVGFGEH---------------------------------GDGYVRIALV--ENEQRIRQAARNIKRF 387 (405)
T ss_pred HHHHhCCEEEeCchhhCCC---------------------------------CCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 5 56789999998754211 1578999997 4667777776666655
Q ss_pred h
Q 010538 499 V 499 (508)
Q Consensus 499 ~ 499 (508)
+
T Consensus 388 l 388 (405)
T PRK09148 388 L 388 (405)
T ss_pred H
Confidence 4
No 121
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=2.5e-23 Score=217.32 Aligned_cols=342 Identities=13% Similarity=0.037 Sum_probs=216.3
Q ss_pred CCCeeeeCCCCC----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C--CCCCCceEEE
Q 010538 39 NGTVYLDHAGAT----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N--ASMKDYKCIF 108 (508)
Q Consensus 39 ~~~iyld~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~~i~~ 108 (508)
.+.+.|..+-.+ ++++.+.+++.+.. ... ...|... ....++|+.+++++ | ++++ +|++
T Consensus 30 ~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~-~~~----~~~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~~--~i~i 98 (398)
T PRK08363 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCRAI-KEG----HNYYGPS----EGLPELREAIVKREKRKNGVDITPD--DVRV 98 (398)
T ss_pred CCeEEEeCCCCCcCCCCCCHHHHHHHHHHH-HcC----CCCCCCC----CCcHHHHHHHHHHHHHhcCCCCChh--hEEE
Confidence 467888877652 35666666554433 211 1112111 12455677777765 3 5777 8999
Q ss_pred cCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEE-ccCCcc-Cccccccccccccccccchhhh
Q 010538 109 TSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAI-DVEEAV-DNDGLSESLVTSTKISLLPIQR 186 (508)
Q Consensus 109 t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v-~~~~~~-~~~~l~~~~~~~~~~~~d~~~l 186 (508)
|+|+++|+.+++.++ .++|+.|+++...|+.+... ++..|.+++.+ +.+.++ .+ |++.+
T Consensus 99 t~G~~~al~~~~~~~-~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~v~~~~~~~~~~~~---------------d~~~l 159 (398)
T PRK08363 99 TAAVTEALQLIFGAL-LDPGDEILIPGPSYPPYTGL---VKFYGGVPVEYRTIEEEGWQP---------------DIDDI 159 (398)
T ss_pred eCCHHHHHHHHHHHh-CCCCCEEEEcCCCCcchHHH---HHHcCCEEEEeccccccCCcC---------------CHHHH
Confidence 999999999999998 78899999998777766544 44568888777 444322 23 57788
Q ss_pred hcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCC---
Q 010538 187 RKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPD--- 260 (508)
Q Consensus 187 ~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d--- 260 (508)
+ +++ .+++++|++++++||||.+++.+++.++++ +|+++|+++|+|++++.-. .+..
T Consensus 160 ~--~~~------~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~---------~a~~~~~~li~Deay~~~~~~~~~~~~~~ 222 (398)
T PRK08363 160 R--KKI------TEKTKAIAVINPNNPTGALYEKKTLKEILD---------IAGEHDLPVISDEIYDLMTYEGKHVSPGS 222 (398)
T ss_pred H--hhC------CcceEEEEEECCCCCCCcCcCHHHHHHHHH---------HHHHcCeEEEEhhhhhhhccCCcccCHHH
Confidence 7 444 457899999999999999999555544443 3334999999999986321 1111
Q ss_pred CCCCCCcEEEEeccccccCCCc--ceEEEE--echhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 261 LSKYPVDFVVMSFYKIFGYPTG--LGALIM--RNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 261 ~~~~~~D~~~~S~~K~~g~P~G--~G~l~~--~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
+....--+++.|++|+|+.| | +||+++ +++.++.+....... . ... .+.+....
T Consensus 223 ~~~~~~vi~~~SfSK~~~~~-GlRiG~~~~~~~~~~~~~l~~~~~~~-------------------~-~~~-~~~s~~~q 280 (398)
T PRK08363 223 LTKDVPVIVMNGLSKVYFAT-GWRLGYIYFVDPEGKLAEVREAIDKL-------------------A-RIR-LCPNTPAQ 280 (398)
T ss_pred cCcCCcEEEEecchhccCCc-cceEEEEEEeCcHHHHHHHHHHHHHH-------------------h-ccc-ccCChHHH
Confidence 11111236788999987745 6 899998 555555444331100 0 000 12233334
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHH
Q 010538 337 ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYRE 416 (508)
Q Consensus 337 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 416 (508)
.++..++... ...+++..+++++.++++.+.|+++ +++.+..|.+ +.++++++++.... -+...
T Consensus 281 ~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~g--------~~~~~~~l~~~~~~-~~~~~ 344 (398)
T PRK08363 281 FAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEI------PGISTTKPQG--------AFYIFPRIEEGPWK-DDKEF 344 (398)
T ss_pred HHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcC------CCCEecCCCe--------EEEEEEEeccCCCC-CHHHH
Confidence 4444444321 1235677888899999999999876 3566654432 45666677642100 01122
Q ss_pred HHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 417 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 417 l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
+.+.|.++||.+++|..+... .++++|+|++ .+.+++++.++.|+
T Consensus 345 ~~~~l~~~gV~v~~g~~f~~~---------------------------------~~~~iRis~~--~~~~~l~~~l~~l~ 389 (398)
T PRK08363 345 VLDVLHEAHVLFVHGSGFGEY---------------------------------GAGHFRLVFL--PPVEILEEAMDRFE 389 (398)
T ss_pred HHHHHHhCCEEEeCchhhCCC---------------------------------CCCeEEEEec--CCHHHHHHHHHHHH
Confidence 456678999999998755321 2578999996 47899999998888
Q ss_pred hhhh
Q 010538 497 DFVN 500 (508)
Q Consensus 497 ~~~~ 500 (508)
+++.
T Consensus 390 ~~~~ 393 (398)
T PRK08363 390 EFMR 393 (398)
T ss_pred HHHH
Confidence 7654
No 122
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=4.8e-23 Score=214.35 Aligned_cols=335 Identities=14% Similarity=0.122 Sum_probs=218.5
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----CC--CCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----NA--SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~~i~~t~g 111 (508)
++.+.|..+....+ ++.+.+++.+ .... ....|.... ....+|+.+++++ |. +++. +|++|+|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~-~~~~----~~~~Y~~~~----g~~~lr~~ia~~l~~~~g~~~~~~~-~I~~t~G 97 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKR-AITE----NYTSYTHNA----GLLELRKAACNFVKDKYDLHYSPES-EIIVTIG 97 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHH-HHhc----CCCCCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCC
Confidence 56788888865433 4555555444 3322 111222111 1345666666665 43 4431 5999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc-CccccccccccccccccchhhhhcCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV-DNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~-~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
+++|+.+++.++ ..+|+.|+++...++++..+. +..|++++.++.+.++ .+ |++.++ +
T Consensus 98 ~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~---------------~~~~l~--~ 156 (387)
T PRK07683 98 ASEAIDIAFRTI-LEPGTEVILPAPIYPGYEPII---RLCGAKPVFIDTRSTGFRL---------------TAEALE--N 156 (387)
T ss_pred hHHHHHHHHHHh-CCCCCEEEEcCCCccchHHHH---HHcCCEEEEeecCcccCCC---------------CHHHHH--H
Confidence 999999999998 678999999887777665554 4469999999886432 22 567777 4
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCCCCCC---
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPDLSKY--- 264 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d~~~~--- 264 (508)
.+ .++++++++++++||||.+++.+++.++++ +|+++|+++|+|++++... .+.++...
T Consensus 157 ~~------~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~---------~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 221 (387)
T PRK07683 157 AI------TEKTRCVVLPYPSNPTGVTLSKEELQDIAD---------VLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM 221 (387)
T ss_pred hc------CcCceEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHcCeEEEEecccccceeCCCcCChhhccCC
Confidence 44 456799999999999999999766666555 4455999999999987421 22223222
Q ss_pred -CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 265 -PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 265 -~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
+..+++.|++|.||.| | +||+++++++++.+.... . +.....+.....+
T Consensus 222 ~~~vi~~~s~SK~~~~p-GlRiG~i~~~~~l~~~~~~~~-~-----------------------~~~~~~~~~~q~~--- 273 (387)
T PRK07683 222 REKTIVINGLSKSHSMT-GWRIGFLFAPSYLAKHILKVH-Q-----------------------YNVTCASSISQYA--- 273 (387)
T ss_pred cCCeEEEeeccccccCc-cceeEEEEcCHHHHHHHHHHH-H-----------------------hccCCCChHHHHH---
Confidence 2458899999999945 7 899999998877655331 0 1111122222222
Q ss_pred HHHHHHh--cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHH-
Q 010538 342 GFNLINS--LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVE- 418 (508)
Q Consensus 342 al~~~~~--~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~- 418 (508)
+..++.+ ..++..++++.+.++++.+.|.+. ++.+..+.+ +.+++..++... ++..++.
T Consensus 274 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~ 335 (387)
T PRK07683 274 ALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-------GLDVEKPTG--------AFYLFPSIGHFT---MSSFDFAL 335 (387)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCe--------eEEEEEecccCC---CCHHHHHH
Confidence 3333322 225567778888899999999875 465554432 556666665321 2222344
Q ss_pred HHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 419 KLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 419 ~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
++++++||.+.+|..|... .++++||+++. +.+++...++.|.++
T Consensus 336 ~ll~~~gI~v~pg~~f~~~---------------------------------~~~~~Ri~~~~--~~~~~~~al~~l~~~ 380 (387)
T PRK07683 336 DLVEEAGLAVVPGSAFSEY---------------------------------GEGYVRLSYAY--SIETLKEGLDRLEAF 380 (387)
T ss_pred HHHHhCCEEEcCchhhCCC---------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 4578899999998755321 25789999995 688888888888776
Q ss_pred hh
Q 010538 499 VN 500 (508)
Q Consensus 499 ~~ 500 (508)
++
T Consensus 381 l~ 382 (387)
T PRK07683 381 LQ 382 (387)
T ss_pred HH
Confidence 53
No 123
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=7.7e-23 Score=216.42 Aligned_cols=365 Identities=14% Similarity=0.030 Sum_probs=244.8
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccc-cCCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEE---cCChH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNV-YGNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIF---TSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~---t~g~t 113 (508)
.+.+-|- ++...+++.+++++...+...+ .+.|++.+..|....+.++. +++..+++|++..+ .+.+ ..+++
T Consensus 34 ~~~l~li-asen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~--~~~~nv~~~SG~ 110 (475)
T PLN03226 34 WKGLELI-ASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPE--KWGVNVQPLSGS 110 (475)
T ss_pred HcCeeEe-cCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcc--eeEEecCcCchH
Confidence 4455554 6677789999888766542222 25666776666555555554 77788999999877 4544 36777
Q ss_pred HHHHHHHhhcCCCCCCeEEEecc---cccchHHHHHHH--HhcCCeEEEEcc--C-CccCccccccccccccccccchhh
Q 010538 114 AALKLVGEAFPWSHQSSYMYTME---NHNSVLGIREYA--LSQGAAAFAIDV--E-EAVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 114 ~al~~~~~~l~~~~g~~vl~~~~---~h~s~~~~~~~~--~~~G~~v~~v~~--~-~~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
.|+..++.++ .++|+.|+..+. .|.+........ ...+..+..++. + ..+.+ |+++
T Consensus 111 ~AN~av~~aL-~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~i---------------D~d~ 174 (475)
T PLN03226 111 PANFAVYTAL-LQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLI---------------DYDK 174 (475)
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCc---------------CHHH
Confidence 7999999998 789999998553 333321111111 111222222233 3 23444 6788
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCC--
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSK-- 263 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~-- 263 (508)
++ +.+.+ .++++|++. .+.+|...|+++|.++|++ +|+++++|++|++|..+.+...
T Consensus 175 Le--~~l~~-----~~pklIv~~--~S~~s~~~D~a~i~~ia~~------------~ga~LlvD~AH~~Gli~~~~~~~p 233 (475)
T PLN03226 175 LE--KKAML-----FRPKLIIAG--ASAYPRDWDYARMRKIADK------------VGALLMCDMAHISGLVAAQEAASP 233 (475)
T ss_pred HH--HHHhh-----cCCeEEEEe--cCcCCCccCHHHHHHHHHH------------cCCEEEEEchhhhCcccCCCCCCC
Confidence 88 55532 345666553 2447899999999999998 9999999999999988776542
Q ss_pred -CCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhcc-CccccccCCCCChhHHHHHHH
Q 010538 264 -YPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ-GVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 264 -~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~gt~~~~~~~~l~~ 341 (508)
.++|++++|+|||++||.| |+++++++.++.+. ++ .... .++..... .....+ .|++++..++++.+
T Consensus 234 ~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~~~----~g-~~~~----~d~~~~i~~a~~~~~-~g~p~~~~iaal~a 302 (475)
T PLN03226 234 FEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPPKG----QG-EGAV----YDYEDKINFAVFPGL-QGGPHNHTIAALAV 302 (475)
T ss_pred CCCCeEEEecCcccccCCCc-eEEEEchhhccccc----CC-CccH----HHHHHHhccccCCcc-CCCchHHHHHHHHH
Confidence 2699999999999966999 99998877643322 22 1000 01100000 001112 46688999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
|++++.+.+.+.+++++.+++++|.+.|.+. |++++.+.+. .+++.+.+... .++..++.+.|
T Consensus 303 Al~~i~~~~~~~~~~~~~~na~~L~~~L~~~-------G~~l~~~~t~-------~hi~lv~~~~~---gi~~~~~~~~L 365 (475)
T PLN03226 303 ALKQAMTPEFKAYQKQVKANAAALANRLMSK-------GYKLVTGGTD-------NHLVLWDLRPL---GLTGSRVEKVL 365 (475)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-------CCEEEcCCCC-------CCEEEEEccCC---CCCHHHHHHHH
Confidence 9999988889999999999999999999886 7999876443 57777776321 14455688999
Q ss_pred hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEe----cCCCCCHHHHHHHHHhhhh
Q 010538 422 SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVS----FGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 422 ~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis----~~~~~t~eev~~l~~~~~~ 497 (508)
++.||.+..+..+.... ...++.||++ .+.-.+++|++++.+.|.+
T Consensus 366 ~~~~I~~nk~~~p~~~~------------------------------~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 366 DLAHITLNKNAVPGDSS------------------------------ALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred HHCCCEECCCCCCCCcc------------------------------cCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 99999987764221100 0125668883 4556789999999999998
Q ss_pred hhhh
Q 010538 498 FVNF 501 (508)
Q Consensus 498 ~~~~ 501 (508)
.++.
T Consensus 416 ~~~~ 419 (475)
T PLN03226 416 AVTI 419 (475)
T ss_pred HHHH
Confidence 8874
No 124
>PRK03321 putative aminotransferase; Provisional
Probab=99.92 E-value=2.6e-23 Score=213.56 Aligned_cols=319 Identities=14% Similarity=0.120 Sum_probs=219.3
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
++.+.|+.+..+. +++.+.+++.+. ......+|. ...+.+|+.+|++++++++ +|++|+|+++++.
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~-~~~~~~y~~----------~g~~~lr~~ia~~~~~~~~--~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARA-AAGVNRYPD----------MGAVELRAALAEHLGVPPE--HVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHH-HHhcCcCCC----------CcHHHHHHHHHHHhCcCHH--HEEECCCHHHHHH
Confidence 3678899886655 566677766443 222211221 1257889999999999888 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
.++.++ .++|+.|+++...++. ....++..|.+++.+|.+.+..+ |+++++ +++
T Consensus 89 ~~~~~~-~~~gd~Vli~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~---------------~~~~l~--~~~----- 142 (352)
T PRK03321 89 QLVQAT-AGPGDEVIFAWRSFEA---YPILVQVAGATPVQVPLTPDHTH---------------DLDAMA--AAI----- 142 (352)
T ss_pred HHHHHh-cCCCCEEEeCCCCHHH---HHHHHHHcCCEEEEccCCCCCCC---------------CHHHHH--Hhh-----
Confidence 999887 6889999987644433 33345567999999998744444 578888 554
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC----CCCCCCC---CCCCcEEE
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV----TQPPDLS---KYPVDFVV 270 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g----~~~~d~~---~~~~D~~~ 270 (508)
.+++++|++++++||||.++|.+++.++++. + ++++++++|+++..- ..+..+. ..+--+++
T Consensus 143 -~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~---------~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 211 (352)
T PRK03321 143 -TDRTRLIFVCNPNNPTGTVVTPAELARFLDA---------V-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVL 211 (352)
T ss_pred -ccCCCEEEEeCCCCCcCCCcCHHHHHHHHHh---------C-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEE
Confidence 3578999999999999999999999999985 2 369999999998631 1111111 11234778
Q ss_pred EeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 271 MSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 271 ~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
.|++|.|| .+| +|++++++++++.+..... ..+.+.....++.+++.....
T Consensus 212 ~S~SK~~g-~~GlRiG~~v~~~~~~~~~~~~~~--------------------------~~~~s~~~q~~a~~~l~~~~~ 264 (352)
T PRK03321 212 RTFSKAYG-LAGLRVGYAVGHPEVIAALRKVAV--------------------------PFSVNSLAQAAAIASLAAEDE 264 (352)
T ss_pred ecchHHhh-hHHHhhhhhcCCHHHHHHHHHhcC--------------------------CCCCCHHHHHHHHHHhcCHHH
Confidence 89999998 557 8999999888776654311 123344444444444432222
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
..+..++..+.++++.+.|++. ++.+. ++. +++++++++. +..++.+.|.++||.+
T Consensus 265 --~~~~~~~~~~~r~~~~~~L~~~-------~~~~~-~~~--------g~~i~i~l~~------~~~~~~~~l~~~gI~v 320 (352)
T PRK03321 265 --LLERVDAVVAERDRVRAALRAA-------GWTVP-PSQ--------ANFVWLPLGE------RTADFAAAAAEAGVVV 320 (352)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHC-------CCccC-CCC--------CCEEEEeCCC------CHHHHHHHHHHCCEEE
Confidence 2333444555667788888775 44432 221 6788888742 1235788899999998
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
++ |. ...+||+++ +.++++++++++.++++
T Consensus 321 ~~---~~------------------------------------~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 321 RP---FA------------------------------------GEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred Ec---cC------------------------------------CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 75 21 245999987 99999999999988643
No 125
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=5e-23 Score=214.38 Aligned_cols=336 Identities=10% Similarity=-0.007 Sum_probs=217.0
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C--CCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N--ASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~~i~~t~g 111 (508)
++.+.|+.+....+ ++.+.+++.+.. ... ....|... .....+|+++|+++ | +++++ +|++|+|
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~-~~~---~~~~Y~~~----~g~~~lr~aia~~~~~~~g~~~~~~~-~i~it~G 102 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAA-ENP---ANHKYSPF----RGYPFLKEAAADFYKREYGVTLDPET-EVAILFG 102 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHH-hCC---CCCCCCCC----CCCHHHHHHHHHHHHHHhCCCCCCCc-cEEEcCC
Confidence 56788887764443 345555543332 210 01112111 11345566666665 5 45541 5999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+++++.+++.++ ..+|+.|+++...|+.+.... +..|++++.+|++.+..+ .+|+++++ ++
T Consensus 103 ~~~~l~~~~~~~-~~~gd~vlv~~P~y~~~~~~~---~~~g~~~~~i~~~~~~~~-------------~~d~~~l~--~~ 163 (389)
T PRK08068 103 GKAGLVELPQCL-MNPGDTILVPDPGYPDYLSGV---ALARAQFETMPLIAENNF-------------LPDYTKIP--EE 163 (389)
T ss_pred cHHHHHHHHHHh-CCCCCEEEEcCCCCcchHHHH---HhcCCEEEEeecccccCC-------------CCCHHHHH--Hh
Confidence 999999999988 578999999987777665544 456999999998743222 12577787 54
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCC----
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSK---- 263 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~---- 263 (508)
+ .+++++|++++++||||.+++.+++.++++ +|++++++||+|.++.. +..+.++..
T Consensus 164 ~------~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~---------la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~ 228 (389)
T PRK08068 164 V------AEKAKLMYLNYPNNPTGAVATKAFFEETVA---------FAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA 228 (389)
T ss_pred c------cccceEEEEECCCCCCCCcCCHHHHHHHHH---------HHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc
Confidence 4 346899999999999999999987777665 45569999999999853 212223211
Q ss_pred CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 264 YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 264 ~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
.+..+++.|++|.|| .+| +||+++++++++.+..... .+..++++..+.++ ..
T Consensus 229 ~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~l~~~l~~~~~-----------------------~~~~~~~~~~q~~~-~~ 283 (389)
T PRK08068 229 KDVGIELYTLSKTFN-MAGWRVAFAVGNESVIEAINLLQD-----------------------HLFVSLFGAIQDAA-IE 283 (389)
T ss_pred cCCEEEEecchhccC-CccceeEeEecCHHHHHHHHHHHh-----------------------hccCCCChHHHHHH-HH
Confidence 124588999999998 557 8999999988876654311 11122332222222 22
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
++..- ...++..++++.+.++++.+.|++. ++.+..+.+ +.++++.+++. ++..++.+.|
T Consensus 284 ~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~-------g~~~~~~~g--------~~~~~v~~~~~----~~~~~~~~~l 343 (389)
T PRK08068 284 ALLSD-QSCVAELVARYESRRNAFISACREI-------GWEVDAPKG--------SFFAWMPVPKG----YTSEQFADLL 343 (389)
T ss_pred HHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe--------eEEEEEECCCC----CCHHHHHHHH
Confidence 33211 1225677888889999999999876 565554432 56788888642 2334577777
Q ss_pred h-hCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 422 S-LSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 422 ~-~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
. ++||.+++|..+... ..+++||+++. +.+.+...++.+++
T Consensus 344 ~~~~gi~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 344 LEKAHVAVAPGNGFGEH---------------------------------GEGYVRVGLLT--DEERLREAVERIGK 385 (389)
T ss_pred HHhCCEEEecchHhCcc---------------------------------CCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 6 479999998654221 25789999973 55666666666554
No 126
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=4.3e-23 Score=215.79 Aligned_cols=326 Identities=11% Similarity=0.028 Sum_probs=217.1
Q ss_pred CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcC-CCCCCeE
Q 010538 53 SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFP-WSHQSSY 131 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~-~~~g~~v 131 (508)
+|.+++++.+.. ..+..++. ....-........++++.+++++|.+ . .++++++++|+..++..+. ..+++.|
T Consensus 61 ~p~v~~a~~~~~-~~~~~~~~-~s~~~~g~~~~~~~Le~~la~~~g~~-~---~l~~~sG~~an~~ai~~l~~~~~~~~v 134 (402)
T TIGR01821 61 HPEVLQAMHETL-DKYGAGAG-GTRNISGTNIPHVELEAELADLHGKE-S---ALVFTSGYVANDATLATLAKIIPGCVI 134 (402)
T ss_pred CHHHHHHHHHHH-HHcCCCCc-chhhhhCCcHHHHHHHHHHHHHhCCC-e---EEEECchHHHHHHHHHHhhCCCCCCEE
Confidence 666777776644 33222221 11111123455778999999999964 3 3445555778888887763 2357777
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSEC 211 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~ 211 (508)
+++...|++....+. ..|+++..++.. |+++++ +.++. ...+++++|++++++
T Consensus 135 ~~~~~~h~s~~~~~~---~~g~~~~~~~~~--------------------d~~~l~--~~l~~--~~~~~~~~v~~e~~~ 187 (402)
T TIGR01821 135 FSDELNHASMIEGIR---HSGAEKFIFRHN--------------------DVAHLE--KLLQS--VDPNRPKIIAFESVY 187 (402)
T ss_pred EEcchHhHHHHHHHH---HcCCeEEEECCC--------------------CHHHHH--HHHHh--ccCCCCeEEEEcCCC
Confidence 777778877765443 357777655532 123333 22211 112368999999999
Q ss_pred CCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-CC--------CCCCCCCcEEEEeccccccCCCc
Q 010538 212 NFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-PP--------DLSKYPVDFVVMSFYKIFGYPTG 282 (508)
Q Consensus 212 n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-~~--------d~~~~~~D~~~~S~~K~~g~P~G 282 (508)
|++|.+.|+++|.++|++ +|+++++|++|+.|.. +. ++. .++|+++.|++|.+| ..|
T Consensus 188 ~~~G~~~~l~~i~~l~~~------------~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g-~~G 253 (402)
T TIGR01821 188 SMDGDIAPIEEICDLADK------------YGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFG-VVG 253 (402)
T ss_pred CCCCCccCHHHHHHHHHH------------cCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhc-cCC
Confidence 999999999999999998 8999999999986542 11 111 146899999999999 446
Q ss_pred ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 010538 283 LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLG 362 (508)
Q Consensus 283 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 362 (508)
|+++.++++++.+..... ... ..++.+...+++..++++.+.+. +.+.++..+++
T Consensus 254 -G~i~~~~~~~~~l~~~~~---------------------~~~-~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~ 308 (402)
T TIGR01821 254 -GYIAASRKLIDAIRSYAP---------------------GFI-FTTSLPPAIAAGATASIRHLKES--QDLRRAHQENV 308 (402)
T ss_pred -ceeecCHHHHHHHHHhCc---------------------Cce-ecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHH
Confidence 888888887766543210 001 12344555677777889887664 66777788999
Q ss_pred HHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHh-hCCCeeccCCCCCchHHHh
Q 010538 363 MYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLAS-LSGIQLRTGCFCNPGACAK 441 (508)
Q Consensus 363 ~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~g~~~~~~~~~~ 441 (508)
+++.+.|+++ +++++.+. ++++.+.++... ....+.+.|. ++||.+++...+..+.
T Consensus 309 ~~l~~~L~~~-------g~~~~~~~---------~~i~~i~~~~~~----~a~~~~~~L~~~~Gi~v~~~~~p~~~~--- 365 (402)
T TIGR01821 309 KRLKNLLEAL-------GIPVIPNP---------SHIVPVIIGDAA----LCKKVSDLLLNKHGIYVQPINYPTVPR--- 365 (402)
T ss_pred HHHHHHHHHc-------CCCcCCCC---------CCEEEEEeCCHH----HHHHHHHHHHhcCCEEEEeECCCCCCC---
Confidence 9999999886 55555332 677777664311 1234666664 5699998754332221
Q ss_pred hcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 442 YLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 442 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
..+++||+++.++|.+|+++++++++++++.+
T Consensus 366 -----------------------------g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 366 -----------------------------GTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred -----------------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 14689999999999999999999999887643
No 127
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=2e-23 Score=212.81 Aligned_cols=282 Identities=15% Similarity=0.092 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
..++|+++|++++.+++ +|++|+|+++++.+++.. ..+|+ |++.. |++......++..|++++.+|++.. .
T Consensus 42 ~~~lr~~ia~~~~~~~~--~I~it~Gs~~~l~~~~~~--~~~~~-vv~~~---P~y~~y~~~~~~~G~~v~~vp~~~~-~ 112 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI--KVLIGPGLTHFIYRLLSY--INVGN-IIIVE---PNFNEYKGYAFTHGIRISALPFNLI-N 112 (332)
T ss_pred HHHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHH--hCCCc-EEEeC---CChHHHHHHHHHcCCeEEEEeCCcc-c
Confidence 57789999999999998 899999999999999874 35565 44445 5666666667778999999998642 1
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeE
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWM 245 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~ 245 (508)
. +.+.++ ..++++|++++++||||.+++.+++.++++ +|+++|++
T Consensus 113 ~---------------~~~~l~-----------~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~---------~a~~~~~~ 157 (332)
T PRK06425 113 N---------------NPEILN-----------NYNFDLIFIVSPDNPLGNLISRDSLLTISE---------ICRKKGAL 157 (332)
T ss_pred C---------------cHHHHh-----------hcCCCEEEEeCCCCCcCCccCHHHHHHHHH---------HHHHcCCE
Confidence 2 234444 236789999999999999999988888776 45568999
Q ss_pred EEEeccccCCCC--CCCC----CCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhh
Q 010538 246 VLIDAAKGCVTQ--PPDL----SKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 246 vivD~a~~~g~~--~~d~----~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
||+|+++..-.. ..+. ...+--+++.|++|.|| .+| +||+++++++++.+......
T Consensus 158 iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-l~GlRiGy~v~~~~li~~l~~~~~~--------------- 221 (332)
T PRK06425 158 LFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILG-IPSLRIGYIATDDYNMKISRKITEP--------------- 221 (332)
T ss_pred EEEecchhccccccchhHHHHhccCCCEEEEeecHHhcC-CchhhheeeecCHHHHHHHHHcCCC---------------
Confidence 999999763211 1111 11133578899999999 557 89999999887766543111
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTG 397 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (508)
.+.+......+. .... +..++...+.+++.++++.+.|+++ +++++.++. +
T Consensus 222 -----------~~~~~~~~~~l~-~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~~--------g 272 (332)
T PRK06425 222 -----------WSVCDPAIDFIR-SIDL--DYVAKHSLDIMENERSYLINNLEAM-------GFRAAGDPS--------A 272 (332)
T ss_pred -----------CccCHHHHHHHH-Hhhh--HHHHHHHHHHHHHHHHHHHHHHHHC-------CCEECCCCC--------c
Confidence 111111111111 1111 1113566788888999999999886 566654433 7
Q ss_pred ceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 398 SMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 398 ~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
++++++++ +. .++.+.|.++||.+++|..+... .++++||
T Consensus 273 ~f~~~~~~--~~-----~~~~~~l~~~gi~v~~~~~f~~~---------------------------------~~~~iRi 312 (332)
T PRK06425 273 NFITFMIP--DA-----HDFYSYLLKNGILVRLLDDYECL---------------------------------GEQYIRI 312 (332)
T ss_pred eEEEEEcC--CH-----HHHHHHHHHCCeEEEECCCCCCC---------------------------------CCCEEEE
Confidence 88998875 22 34778888899999998654221 1478999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~ 499 (508)
|++ +.++.++++++|++++
T Consensus 313 s~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 313 AIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred EeC---CHHHHHHHHHHHHHHh
Confidence 999 8999999999998765
No 128
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=4.9e-23 Score=215.72 Aligned_cols=325 Identities=12% Similarity=0.046 Sum_probs=215.8
Q ss_pred CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcC-CCCCCeE
Q 010538 53 SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFP-WSHQSSY 131 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~-~~~g~~v 131 (508)
+|.+++++.+.+ ..+..... .....+.......++++.+|+++|.+ + .+++++| ++++..++..+. ..+++.|
T Consensus 62 ~p~v~~a~~~~~-~~~~~~~~-~s~~~~g~~~~~~~l~~~la~~~g~~-~--~~~~~sG-~~an~~ai~~l~~~~~~~~i 135 (407)
T PRK09064 62 HPKVIEAMIEAL-DRCGAGAG-GTRNISGTNHYHVELERELADLHGKE-A--ALVFTSG-YVSNDATLSTLAKLIPDCVI 135 (407)
T ss_pred CHHHHHHHHHHH-HHcCCCCC-CcCcCccCHHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHHhCCCCCCEE
Confidence 778888876544 32211111 11111123456788999999999963 4 4666555 457666666542 3467777
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSEC 211 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~ 211 (508)
+....+|.+....+.. .++++..++.. |++.++ +.++. ...+++++|++++++
T Consensus 136 ~~~~~~h~s~~~~~~~---~~~~~~~~~~~--------------------d~~~le--~~l~~--~~~~~~~~v~~~~v~ 188 (407)
T PRK09064 136 FSDELNHASMIEGIRR---SRCEKHIFRHN--------------------DVAHLE--ELLAA--ADPDRPKLIAFESVY 188 (407)
T ss_pred EEeCcchHHHHHHHHH---cCCcEEEECCC--------------------CHHHHH--HHHHh--ccCCCCeEEEEeCCC
Confidence 7777888877655443 46666655542 233344 33321 112568999999999
Q ss_pred CCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-C--------CCCCCCCCcEEEEeccccccCCCc
Q 010538 212 NFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-P--------PDLSKYPVDFVVMSFYKIFGYPTG 282 (508)
Q Consensus 212 n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-~--------~d~~~~~~D~~~~S~~K~~g~P~G 282 (508)
|++|.+.|+++|.++|++ +|+++++|++|+.|.. + .++. .++|+++.|++|.|| +.|
T Consensus 189 s~~G~~~~l~~i~~l~~~------------~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g-~~G 254 (407)
T PRK09064 189 SMDGDIAPIAEICDLADK------------YNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFG-VMG 254 (407)
T ss_pred CCCccccCHHHHHHHHHH------------cCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhh-ccC
Confidence 999999999999999998 8999999999985531 1 1111 146899999999999 667
Q ss_pred ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 010538 283 LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLG 362 (508)
Q Consensus 283 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 362 (508)
|+++.+++.++.+..... ...+. .+.+....+++.++++++.+. ....+++.+++
T Consensus 255 -G~~~~~~~~~~~l~~~~~---------------------~~~~t-~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~ 309 (407)
T PRK09064 255 -GYIAGSAALVDAVRSYAP---------------------GFIFT-TSLPPAIAAAALASIRHLKES--NEERERHQERA 309 (407)
T ss_pred -ceEecCHHHHHHHHHhCc---------------------ccccc-CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHH
Confidence 898888887765543211 01111 233445566677788887764 45578899999
Q ss_pred HHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHh-hCCCeeccCCCCCchHHHh
Q 010538 363 MYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLAS-LSGIQLRTGCFCNPGACAK 441 (508)
Q Consensus 363 ~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~g~~~~~~~~~~ 441 (508)
+++.+.|+++ +++++.+. ++++.+.+++. ....++.+.|. ++||.+++......+.
T Consensus 310 ~~l~~~L~~~-------g~~~~~~~---------~~iv~i~~~~~----~~~~~l~~~L~~~~gi~v~~~~~p~~~~--- 366 (407)
T PRK09064 310 AKLKAALDAA-------GIPVMPNE---------SHIVPVMVGDP----EKCKKASDMLLEEHGIYVQPINYPTVPR--- 366 (407)
T ss_pred HHHHHHHHHc-------CCCCCCCC---------CCEEEEEeCCH----HHHHHHHHHHHHhCCEEEeeECCCCCCC---
Confidence 9999999886 56555432 67787777531 11234777664 5699998743221110
Q ss_pred hcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 442 YLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 442 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
..+++|||++.++|.+|+++++++|+++++.
T Consensus 367 -----------------------------~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 367 -----------------------------GTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred -----------------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1367999999999999999999999988654
No 129
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=3.7e-23 Score=216.22 Aligned_cols=338 Identities=11% Similarity=0.016 Sum_probs=219.0
Q ss_pred CCCeeeeCCCC-----CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-----CCCCCceEEE
Q 010538 39 NGTVYLDHAGA-----TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN-----ASMKDYKCIF 108 (508)
Q Consensus 39 ~~~iyld~~~~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-----~~~~~~~i~~ 108 (508)
++.+.|+.+.. .++++.+.+++.+.+... ....|.. .....++|+.++++++ ++++ +|++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~----~~g~~~lr~aia~~~~~~~~~~~~~--~i~~ 100 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG----KYNGYAP----TVGALSAREAIASYYHNPDGPIEAD--DVVL 100 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhcc----CCCCCCC----CCCCHHHHHHHHHHHhhcCCCCCHH--HEEE
Confidence 46688887654 245666666654433211 0111211 1123557788888887 6777 8999
Q ss_pred cCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc--cCccccccccccccccccchhhh
Q 010538 109 TSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA--VDNDGLSESLVTSTKISLLPIQR 186 (508)
Q Consensus 109 t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~--~~~~~l~~~~~~~~~~~~d~~~l 186 (508)
|+|+++|+.+++.++ ..+|+.|+++...|+ .+...++..|+++..++++.+ ..+ |++.+
T Consensus 101 t~G~~~al~~~~~~l-~~~gd~v~i~~P~y~---~~~~~~~~~g~~v~~~~~~~~~~~~~---------------d~~~l 161 (401)
T TIGR01264 101 CSGCSHAIEMCIAAL-ANAGQNILVPRPGFP---LYETLAESMGIEVKLYNLLPDKSWEI---------------DLKQL 161 (401)
T ss_pred CcChHHHHHHHHHHh-CCCCCEEEEeCCCCh---hHHHHHHHcCCEEEEeecCCccCCCC---------------CHHHH
Confidence 999999999999998 578899998875554 444556667999999987543 233 67888
Q ss_pred hcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCC
Q 010538 187 RKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLS 262 (508)
Q Consensus 187 ~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~ 262 (508)
+ +++ .++++++++++++||||.+++.+++.++++ +|+++|++||+|+++.. +....++.
T Consensus 162 ~--~~~------~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 224 (401)
T TIGR01264 162 E--SLI------DEKTAALIVNNPSNPCGSVFSRQHLEEILA---------VAERQCLPIIADEIYGDMVFSGATFEPLA 224 (401)
T ss_pred H--HHh------ccCceEEEEcCCCCCCCCCCCHHHHHHHHH---------HHHHCCCEEEEEhhhhhhccCCcccccHH
Confidence 8 544 346799999999999999999776666665 45559999999999863 21122222
Q ss_pred CCC---CcEEEEeccccccCCCc--ceEEEEec------hhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 263 KYP---VDFVVMSFYKIFGYPTG--LGALIMRN------DAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 263 ~~~---~D~~~~S~~K~~g~P~G--~G~l~~~~------~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
... .-+++.|++|.|+ .+| +||+++++ +.++.+.... .....+
T Consensus 225 ~~~~~~~vi~~~SfSK~~~-~~GlRiG~iv~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 278 (401)
T TIGR01264 225 SLSSTVPILSCGGLAKRWL-VPGWRLGWIIIHDRRGILRDIRDGLVKLS-------------------------QRILGP 278 (401)
T ss_pred HcCCCCcEEEEccCcccCC-CccceEEEEEecCcchhHHHHHHHHHHHh-------------------------hccCCC
Confidence 221 1378899999888 447 89999874 2222221110 001122
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC--CC
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP--DG 409 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 409 (508)
+.....++..+++...+..+++.++++.+.++++.+.|+++ +++.+..|.+ +++++++++.. ..
T Consensus 279 ~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~------~~~~~~~p~~--------g~f~~~~~~~~~~~~ 344 (401)
T TIGR01264 279 CTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV------PGLRPVMPSG--------AMYMMVGIEMEHFPE 344 (401)
T ss_pred CcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC------CCCcccCCCe--------eeEEEEEecccccCC
Confidence 33334444444432112235677788888889999999876 3555544543 78999987531 11
Q ss_pred CccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHH
Q 010538 410 SWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDA 488 (508)
Q Consensus 410 ~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev 488 (508)
. .+..++.+.| +++||.+.+|..|. ..+++|||++. ..+++
T Consensus 345 ~-~~~~~~~~~l~~~~gI~v~pg~~f~-----------------------------------~~~~iRis~~~--~~~~l 386 (401)
T TIGR01264 345 F-KNDVEFTERLVAEQSVFCLPGSCFE-----------------------------------YPGFFRVVLTV--PVVMM 386 (401)
T ss_pred C-CCHHHHHHHHHHhCCEEEeCchhcC-----------------------------------CCCeEEEEEcC--CHHHH
Confidence 0 1233455555 68999999986442 15789999984 57899
Q ss_pred HHHHHhhhhhhh
Q 010538 489 KVNRCSSFDFVN 500 (508)
Q Consensus 489 ~~l~~~~~~~~~ 500 (508)
+..++.|.++++
T Consensus 387 ~~~l~rl~~~~~ 398 (401)
T TIGR01264 387 EEACSRIQEFCE 398 (401)
T ss_pred HHHHHHHHHHHh
Confidence 998888887664
No 130
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=6.1e-23 Score=214.92 Aligned_cols=337 Identities=12% Similarity=0.042 Sum_probs=223.7
Q ss_pred CeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 41 TVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 41 ~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
..|..|+..+. .+|.+++++.+.+ ..+..++. .............++++++|+++|.+ . .+++++|+ +|+..+
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~-~~~~~~~~-~s~~~~~~~~~~~~le~~la~~~g~~-~--~~~~~SG~-~An~~a 121 (406)
T PRK13393 48 TVWCSNDYLGMGQHPAVLAAMHEAL-DTCGAGAG-GTRNISGTNHYHVLLEAELADLHGKE-A--ALLFTSGY-VSNWAA 121 (406)
T ss_pred EEeecccccCCCCCHHHHHHHHHHH-HHcCCCCc-ccccccCChHHHHHHHHHHHHHhCCC-c--EEEeCCcH-HHHHHH
Confidence 34555556666 4777888876654 33222221 11111122346788899999999974 3 46666655 588888
Q ss_pred HhhcCC-CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 120 GEAFPW-SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 120 ~~~l~~-~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
+.++.. .+|+.|++...+|+++...+.. .|.+++.++..+ ++.++ +.++ ...
T Consensus 122 i~~l~~~~~g~~I~~~~~~H~s~~~~~~~---~g~~~~~~~~~d--------------------~~~l~--~~l~--~~~ 174 (406)
T PRK13393 122 LSTLGSRLPGCVILSDELNHASMIEGIRH---SRAEKRIFRHND--------------------PADLE--RKLS--DLD 174 (406)
T ss_pred HHHhhcCCCCCEEEEccchhHHHHHHHHH---cCCeEEEeCCCC--------------------HHHHH--HHHH--hcc
Confidence 886632 2678888888899987766543 477777776432 22233 2221 111
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-CC-----CCC--CCCCcEEE
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-PP-----DLS--KYPVDFVV 270 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-~~-----d~~--~~~~D~~~ 270 (508)
.+++++|++++++|++|.+.|+++|.++|++ +|+++++|++|+.|.. +. ... ..++|+++
T Consensus 175 ~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~------------~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~ 242 (406)
T PRK13393 175 PHRPKLVAFESVYSMDGDIAPIAEICDVAEK------------HGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIE 242 (406)
T ss_pred CCCCEEEEEcCCCCCCCchhCHHHHHHHHHH------------cCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEE
Confidence 2467999999999999999999999999998 8999999999986542 11 111 11368888
Q ss_pred EeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccc-cCCCCChhHHHHHHHHHHHHHhc
Q 010538 271 MSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELF-EDGTASFLSIASIRHGFNLINSL 349 (508)
Q Consensus 271 ~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~~l~~al~~~~~~ 349 (508)
.|++|.+| ..| |+++.+++.++.+... ...+ ..++.+....+++.++++.+.+.
T Consensus 243 ~tlsKa~g-~~G-G~~~~~~~~~~~l~~~-----------------------~~~~~~t~~~~p~~~aa~~aaL~~~~~~ 297 (406)
T PRK13393 243 GTLAKAFG-VMG-GYITGSAALCDFIRSF-----------------------ASGFIFTTSLPPAVAAGALASVRHLKAS 297 (406)
T ss_pred EeCchhhc-ccC-ceeeCCHHHHHHHHHh-----------------------CcCceecCccCHHHHHHHHHHHHHHhhC
Confidence 99999999 446 8888888776655432 1111 13445666677777899987664
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhh-CCCee
Q 010538 350 TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASL-SGIQL 428 (508)
Q Consensus 350 g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~-~gI~v 428 (508)
+ ..++++.++++++.+.|+++ +++++.+. ++++.+.+.+. .....+.+.|.+ +||.+
T Consensus 298 ~--~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~---------~~i~~v~~~~~----~~~~~l~~~L~~~~Gi~v 355 (406)
T PRK13393 298 S--AERERHQDRVARLRARLDKA-------GIPHLPNP---------SHIVPVMVGDP----VLCKQISDELLDRYGIYV 355 (406)
T ss_pred H--HHHHHHHHHHHHHHHHHHHc-------CCCcCCCC---------CCeEEEEeCCH----HHHHHHHHHHHHhCCEEE
Confidence 2 33467788899999999875 45444221 67777765331 112347777766 69999
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
+++.....+. ..+.+|++++.++|.+|+++++++|+++++.
T Consensus 356 ~~~~~p~~p~--------------------------------g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 356 QPINYPTVPR--------------------------------GTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred EeECCCCCCC--------------------------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 8854322211 1367999999999999999999999988654
No 131
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=3.6e-23 Score=215.95 Aligned_cols=355 Identities=13% Similarity=0.057 Sum_probs=220.6
Q ss_pred chHHHHHHhhccC----CCCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-
Q 010538 25 SIDQIRATEFKRL----ENGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN- 98 (508)
Q Consensus 25 ~~~~~r~~~f~~~----~~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~- 98 (508)
.+..+++ .+..+ +.+.+.|+.+-...+ ++.+.+++ ...+.... .|........+.+.+.+.+.+.+|
T Consensus 12 ~~~~~~~-~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~-~~~~~~~~-----~Y~~~~G~~~lr~~ia~~~~~~~g~ 84 (396)
T PRK09147 12 PFEKLRA-LFAGVTPPADLPPISLSIGEPKHPTPAFIKDAL-AANLDGLA-----SYPTTAGLPALREAIAAWLERRYGL 84 (396)
T ss_pred hHHHHHH-HHHhhhhccCCCeEecCCCCCCCCCCHHHHHHH-HHHhhhhc-----CCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 4555665 54322 257888887765544 44444444 33322211 121111112233333333333446
Q ss_pred --CCCCCceEEEcCChHHHHHHHHhhcCCCC---CCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccc
Q 010538 99 --ASMKDYKCIFTSGATAALKLVGEAFPWSH---QSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 99 --~~~~~~~i~~t~g~t~al~~~~~~l~~~~---g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~ 173 (508)
+++++ +|++|+|+++|+.+++.++ ..+ |+.|+++...|+.+... ++..|++++.||.+.+..+
T Consensus 85 ~~~~~~~-~i~it~G~~~al~~~~~~l-~~~~~~gd~vlv~~P~y~~~~~~---~~~~g~~~~~vp~~~~~~~------- 152 (396)
T PRK09147 85 PALDPAT-QVLPVNGSREALFAFAQTV-IDRDGPGPLVVCPNPFYQIYEGA---ALLAGAEPYFLNCDPANNF------- 152 (396)
T ss_pred CcCCccc-eEEECCChHHHHHHHHHHH-cCCCCCCCEEEEcCCCccchHHH---HHhcCCEEEEeccCccccC-------
Confidence 44421 7999999999999999998 566 78899887666555443 4456999999998753222
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG 253 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~ 253 (508)
.+|+++++ +.+ .++++++++++++||||.+++.+++.++++ +|++++++||+|.++.
T Consensus 153 ------~~d~~~l~--~~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~---------~a~~~~~~ii~De~y~ 209 (396)
T PRK09147 153 ------APDFDAVP--AEV------WARTQLLFVCSPGNPTGAVLPLDDWKKLFA---------LSDRYGFVIASDECYS 209 (396)
T ss_pred ------ccCHHHHH--HHH------hhccEEEEEcCCCCCcCccCCHHHHHHHHH---------HHHHcCeEEEeecccc
Confidence 11678887 433 347899999999999999999998888877 5667999999999986
Q ss_pred CCC-----CCCC-C---CC-----CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhh
Q 010538 254 CVT-----QPPD-L---SK-----YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 254 ~g~-----~~~d-~---~~-----~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
.-. .+.. + .. .+.-+++.|++|.++.| | +||+++++++++.+.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~-GlRiG~~~~~~~l~~~~~~~~~---------------- 272 (396)
T PRK09147 210 EIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP-GLRSGFVAGDAALLKKFLLYRT---------------- 272 (396)
T ss_pred ccccCCCCCCchhhhhccccCccccccEEEEeccccccCCc-cceeeeecCCHHHHHHHHHHhh----------------
Confidence 421 1111 1 01 12338899999988734 7 8999999888766553210
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTG 397 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (508)
....+.+.....+..+++. ....+.+.++.+++.++.+.+.|++. +.+..|++ +
T Consensus 273 --------~~~~~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~--------~~~~~p~~--------g 326 (396)
T PRK09147 273 --------YHGCAMPPAVQAASIAAWN--DEAHVRENRALYREKFDAVTPILAPV--------LDVQLPDA--------G 326 (396)
T ss_pred --------hcccCCCHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHHh--------cCCCCCCe--------e
Confidence 0111223333333333332 12235667778888888888888763 33333332 7
Q ss_pred ceEEEEeeCCCCCccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEE
Q 010538 398 SMVSFNLKRPDGSWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIR 476 (508)
Q Consensus 398 ~~v~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iR 476 (508)
.++|++++ .+ ..++.+.| +++||.+.+|..|..... +. ....+++|
T Consensus 327 ~f~~~~~~-~~-----~~~~~~~ll~~~gv~v~pg~~f~~~~~--------------------~~-------~~~~~~iR 373 (396)
T PRK09147 327 FYLWAKVP-GD-----DTEFARRLYADYNVTVLPGSYLAREAH--------------------GV-------NPGAGRVR 373 (396)
T ss_pred EEEEEECC-CC-----HHHHHHHHHHhCCEEEeCCcccccccc--------------------CC-------CCCCCeEE
Confidence 89999986 22 12355554 678999999976543100 00 01257899
Q ss_pred EecCCCCCHHHHHHHHHhhhhhh
Q 010538 477 VSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 477 is~~~~~t~eev~~l~~~~~~~~ 499 (508)
|+++. +.++++..++.|++++
T Consensus 374 i~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 374 IALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred EEecC--CHHHHHHHHHHHHHHh
Confidence 99985 5788888888887765
No 132
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=3.7e-23 Score=217.75 Aligned_cols=345 Identities=12% Similarity=0.044 Sum_probs=219.8
Q ss_pred CCCeeeeCCCC-----CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------CCCCCceEE
Q 010538 39 NGTVYLDHAGA-----TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------ASMKDYKCI 107 (508)
Q Consensus 39 ~~~iyld~~~~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~~i~ 107 (508)
.++|.|..+-. -++++.+.+++.+.+.... ...|.. .....++|+.++++++ ++++ +|+
T Consensus 52 ~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~----~~~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~--~v~ 121 (430)
T PLN00145 52 RPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGK----YNSYST----CVGLLPARRAIAEYLSRDLPYELSTD--DIY 121 (430)
T ss_pred CCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCc----CCCCCC----CccCHHHHHHHHHHHhhccCCCCChh--hEE
Confidence 47999998754 2345666666654332211 111221 1224567777777764 4666 899
Q ss_pred EcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhh
Q 010538 108 FTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRR 187 (508)
Q Consensus 108 ~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~ 187 (508)
+|+|+++|+.+++.++ ..+|++|+++...|+.+... +...|++++.+++...... ..|++.++
T Consensus 122 it~G~~~al~l~~~~l-~~~Gd~Vlv~~P~y~~y~~~---~~~~g~~~~~~~~~~~~~~-------------~~d~~~l~ 184 (430)
T PLN00145 122 LTAGCAQAIEIIMSVL-AQPGANILLPRPGYPLYEAR---AVFSGLEVRHFDLLPERGW-------------EVDLEGVE 184 (430)
T ss_pred EeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCccHHHH---HHHcCCEEEEeeCCcccCC-------------cCCHHHHH
Confidence 9999999999999999 58899999998777765544 3446899999886432211 12688888
Q ss_pred cCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---CC-CCCCC--
Q 010538 188 KGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC---VT-QPPDL-- 261 (508)
Q Consensus 188 ~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~---g~-~~~d~-- 261 (508)
+++ +++++++++++++||||.++|.+++.++++ +|+++|++||+|+++.. +. ..+++
T Consensus 185 --~~~------~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~---------~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~ 247 (430)
T PLN00145 185 --ALA------DENTVAMVIINPNNPCGSVYSYEHLAKIAE---------TARKLGILVIADEVYDHLTFGSKPFVPMGV 247 (430)
T ss_pred --HHh------CcCceEEEEeCCCCCCCCCCCHHHHHHHHH---------HHHHcCCEEEEeccchhhccCCCCccchhh
Confidence 444 567899999999999999999776666654 44459999999999863 11 11222
Q ss_pred -CCCCCcEEEEeccccccCCCc--ceEEEEe--chhHhhh--ccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 262 -SKYPVDFVVMSFYKIFGYPTG--LGALIMR--NDAAKLL--KNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 262 -~~~~~D~~~~S~~K~~g~P~G--~G~l~~~--~~~~~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
.....-+++.|++|.|+.| | +||+++. +..++.. ...+. ........++..
T Consensus 248 ~~~~~~vi~~~S~SK~~~~p-G~RlG~iv~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~ 305 (430)
T PLN00145 248 FGEVAPVLTLGSISKRWVVP-GWRLGWIATCDPNGILKETKVVDSIR---------------------NYLNISTDPATF 305 (430)
T ss_pred hcccCcEEEEeccccccCCC-CeeEEEEEEecchhhhhhhHHHHHHH---------------------HHhcccCCCCHH
Confidence 2222348899999988835 7 8999984 2222211 00000 000001122333
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe-cCCCCCcccCCCCceEEEEeeCC--CCCc
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY-GTYTSEVSYHDTGSMVSFNLKRP--DGSW 411 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~ 411 (508)
...++..+++.-.+..++...+++++.++.+.+.|++++ ++... .|.+ +.+++++++.. .+..
T Consensus 306 ~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~------g~~~~~~P~g--------a~y~~v~l~~~~~~~~~ 371 (430)
T PLN00145 306 VQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIK------CITCPHKPEG--------SMFVMVKLDLSCLSGIK 371 (430)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCCcCCCe--------eeEEEeccChhhcCCCC
Confidence 344444444421122367778888999999999998863 56544 3433 78888887531 1100
Q ss_pred cCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHH
Q 010538 412 FGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVN 491 (508)
Q Consensus 412 ~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l 491 (508)
-+...+.++++++||.+.+|..|.. ++++|||+.. +.++++..
T Consensus 372 ~~~~~~~~ll~~~gV~v~pG~~fg~-----------------------------------~~~lRis~~~--~~~~l~~a 414 (430)
T PLN00145 372 DDMDFCCKLAKEESVVVLPGSALGM-----------------------------------KNWLRITFAI--DPPSLEDG 414 (430)
T ss_pred CHHHHHHHHHHhCCEEEeCccccCC-----------------------------------CCeEEEEeCC--CHHHHHHH
Confidence 0122345677889999999875421 5799999994 67778887
Q ss_pred HHhhhhhhh
Q 010538 492 RCSSFDFVN 500 (508)
Q Consensus 492 ~~~~~~~~~ 500 (508)
++.|++++.
T Consensus 415 l~rl~~~~~ 423 (430)
T PLN00145 415 LERLKSFCL 423 (430)
T ss_pred HHHHHHHHH
Confidence 777776653
No 133
>PLN02271 serine hydroxymethyltransferase
Probab=99.92 E-value=4.6e-23 Score=215.40 Aligned_cols=370 Identities=14% Similarity=0.078 Sum_probs=258.4
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCc--eEEEcCChH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDY--KCIFTSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~--~i~~t~g~t 113 (508)
.+.+-|= ++-..+++.+++++-. .+.+.| +.|+..|+.|....+.++. +.+.+.++||++++++ +|-.. +++
T Consensus 148 ~~~l~LI-ASEN~~S~av~~algS-~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs 224 (586)
T PLN02271 148 FKGIELI-ASENFVCRAVMEALGS-HLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCT 224 (586)
T ss_pred hcCeeec-cccccCCHHHHHHhcC-cccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHH
Confidence 3445553 6677789999888644 444544 5677777777766665554 7888899999887321 44443 677
Q ss_pred HHHHHHHhhcCCCCCCeEEEecccccchHHHH------HHHHhcCCeEEEEc--cC-CccCccccccccccccccccchh
Q 010538 114 AALKLVGEAFPWSHQSSYMYTMENHNSVLGIR------EYALSQGAAAFAID--VE-EAVDNDGLSESLVTSTKISLLPI 184 (508)
Q Consensus 114 ~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~------~~~~~~G~~v~~v~--~~-~~~~~~~l~~~~~~~~~~~~d~~ 184 (508)
.|+..++.++ +++||+|+..+.+|.+.+.-. ..+...|..+..+| ++ .++.+ |.+
T Consensus 225 ~AN~aV~~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~I---------------Dyd 288 (586)
T PLN02271 225 SANFAVYTGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYI---------------DYD 288 (586)
T ss_pred HHHHHHHHHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCcc---------------CHH
Confidence 7999999999 899999999998888765432 22334576677766 43 24555 678
Q ss_pred hhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCC--
Q 010538 185 QRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLS-- 262 (508)
Q Consensus 185 ~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~-- 262 (508)
+++ +. +...+|++|++.+..++ ..+|+++|.++|++ +|+++++|++|..|.++.++.
T Consensus 289 ~le--k~-----a~~~rPKLII~g~Sayp--r~~D~~~i~eIAde------------vGA~LmvD~AH~aGLIa~g~~~s 347 (586)
T PLN02271 289 KLE--EK-----ALDFRPKILICGGSSYP--REWDYARFRQIADK------------CGAVLMCDMAHISGLVAAKECVN 347 (586)
T ss_pred HHH--HH-----hhhcCCeEEEECchhcc--CcCCHHHHHHHHHH------------cCCEEEEECcccccccccCcCCC
Confidence 888 32 23578999999888887 88999999999998 899999999999998876643
Q ss_pred -CCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhc-cCccccccCCCCChhHHHHHH
Q 010538 263 -KYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRR-QGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 263 -~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~~~~~~~l~ 340 (508)
..++|++++|+|||+.||.| |+++++++.....++...+|+... ...++.... ....-.+..|+.+.. ++++.
T Consensus 348 P~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~~~g~~gs~s~~~---~~~d~~~kI~~aVfPglqgGphn~~-IAalA 422 (586)
T PLN02271 348 PFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLRKQGMLLSHGDDN---SHYDFEEKINFAVFPSLQGGPHNNH-IAALA 422 (586)
T ss_pred CCcCCcEEEeCCcccCCCCCc-eEEEecccccccccCCcccccccc---ccHHHHHHhhcccCCccccChhHHH-HHHHH
Confidence 22689999999999988999 999988765432333322222100 000111100 000114566666655 99999
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL 420 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 420 (508)
.++++......+...+++.++++.|.+.|.+. |++++...+. .+++.+++.... ++...+.+.
T Consensus 423 valkea~~~efk~Ya~QVv~NAkaLA~~L~~~-------G~~vv~ggTd-------nHlvLvDl~~~g---~~G~~ae~~ 485 (586)
T PLN02271 423 IALKQVATPEYKAYMQQVKKNAQALASALLRR-------KCRLVTGGTD-------NHLLLWDLTTLG---LTGKNYEKV 485 (586)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-------CCeEeeCCCC-------cceeeecCcccC---CCHHHHHHH
Confidence 99998776667899999999999999999886 8999876554 788888875431 344568999
Q ss_pred HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC----CHHHHHHHHHhhh
Q 010538 421 ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS----TFEDAKVNRCSSF 496 (508)
Q Consensus 421 L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~----t~eev~~l~~~~~ 496 (508)
|++.||.+.--..+.. + ....++.|||.....+ .++|++.+.+.|.
T Consensus 486 Le~~~I~~Nkn~iP~d---------------------------~---~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 486 CEMCHITLNKTAIFGD---------------------------N---GTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred HHHcCeEeccccCCCC---------------------------C---CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 9999999754321110 0 0123678999976554 5688888887777
Q ss_pred hhhh
Q 010538 497 DFVN 500 (508)
Q Consensus 497 ~~~~ 500 (508)
+.++
T Consensus 536 ~~~~ 539 (586)
T PLN02271 536 RAAQ 539 (586)
T ss_pred HHHh
Confidence 7665
No 134
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.4e-23 Score=218.12 Aligned_cols=307 Identities=14% Similarity=0.057 Sum_probs=206.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchH-HHHHHHHhcCCeEEEEc
Q 010538 81 ATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVL-GIREYALSQGAAAFAID 159 (508)
Q Consensus 81 ~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~-~~~~~~~~~G~~v~~v~ 159 (508)
......+++++.+|++.|++. .+++++| +.|+.+++. + +++|++||++...|++.. .+...+++.|++++.++
T Consensus 51 ~~~p~~~~le~~lA~l~g~~~---~v~~~sG-~~ai~~~l~-~-l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 51 SGNPTREALEDIIAELEGGTK---GFAFASG-MAAISTAFL-L-LSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred CCChhHHHHHHHHHHHhCCCC---eEEECCH-HHHHHHHHH-H-hCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 344567889999999999874 4666555 568877775 3 578999999999998654 45566777899999998
Q ss_pred cCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCC
Q 010538 160 VEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPF 239 (508)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~ 239 (508)
.+ |+++++ +++ +++|++|++++++||||.+.|+++|.++|++
T Consensus 125 ~~--------------------d~~~l~--~~l------~~~tklV~l~~p~NptG~~~dl~~I~~la~~---------- 166 (390)
T PRK08064 125 MT--------------------NLEEVA--QNI------KPNTKLFYVETPSNPLLKVTDIRGVVKLAKA---------- 166 (390)
T ss_pred CC--------------------CHHHHH--Hhc------CCCceEEEEECCCCCCcEeccHHHHHHHHHH----------
Confidence 63 256667 444 5678999999999999999999999999998
Q ss_pred CCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec-hhHhhhccccccCceEEecccchhhh
Q 010538 240 SKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFV 316 (508)
Q Consensus 240 ~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~ 316 (508)
+|+++++|++++.+.....+ ++++|+++.|+||+++||.| .|++++++ ++.+.+++...+++.
T Consensus 167 --~g~~vvvD~a~~~~~~~~~~-~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~----------- 232 (390)
T PRK08064 167 --IGCLTFVDNTFLTPLLQKPL-DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGA----------- 232 (390)
T ss_pred --cCCEEEEECCCCcccccCch-hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCC-----------
Confidence 89999999999876543333 45899999999999887877 48888764 566666554322211
Q ss_pred hhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccC------C--CCCceEEEecCCC
Q 010538 317 KRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRH------E--NGADVCTIYGTYT 388 (508)
Q Consensus 317 ~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~------~--~~~~~~~~~~~~~ 388 (508)
..+....+.+...++ .+..+.++..+.+..+.+.|++.+. + ...|+.++...+.
T Consensus 233 -------------~~~~~~a~l~~~gl~-----tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~ 294 (390)
T PRK08064 233 -------------VLGVQDCWLVLRGLK-----TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQA 294 (390)
T ss_pred -------------CCCHHHHHHHHcccC-----cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhC
Confidence 111111111111222 2445666667777777777776531 0 0112222222211
Q ss_pred CCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCC---eeccCC------------CCCchHHHhhcCCChhhhhhh
Q 010538 389 SEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGI---QLRTGC------------FCNPGACAKYLGLSHSDLLSN 453 (508)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI---~v~~g~------------~~~~~~~~~~~~~~~s~~~~~ 453 (508)
...+++++|.+++. .++.+.+...++ .++.|. +|..+.. -...
T Consensus 295 -----~g~gg~~sf~~~~~-------~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~----------~~~~ 352 (390)
T PRK08064 295 -----TSAGAVLSFTLQSE-------EAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKE----------ERDE 352 (390)
T ss_pred -----CCcceEEEEEECCH-------HHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHH----------HHHh
Confidence 12478999999642 135667777677 667772 2222110 0111
Q ss_pred hhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 454 IEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
+| ..++.||+|++.++++|.++.+.++|.++.
T Consensus 353 ~g--------------i~~~liR~SvGle~~~dli~dl~~Al~~~~ 384 (390)
T PRK08064 353 RG--------------ITDGLLRLSVGLENVDDLIADFEQALSYVE 384 (390)
T ss_pred cC--------------CCCCeEEEEeccCCHHHHHHHHHHHHHhcc
Confidence 22 236899999999999999999999998753
No 135
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.4e-23 Score=209.88 Aligned_cols=320 Identities=18% Similarity=0.143 Sum_probs=214.4
Q ss_pred CCCeeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
.+.+.|+.+... .++|.+.+++.+. .......|. . ....+|+.+|++++++++ +|++|+|+++++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~----~------~~~~lr~~ia~~~~~~~~--~I~it~G~~~al~ 96 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREA-AERVHSYPK----A------SHADLTAALADRWDVSPE--QVWLANGGDGALD 96 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHH-HhhhhcCCC----C------CHHHHHHHHHHHhCCCcc--eEEECCCHHHHHH
Confidence 468889887544 3466666655332 222211121 1 145789999999999998 9999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++.++ .++|+.|+++...|+.+. ......|..++.+|++.+..+ ..+.+.+. +..
T Consensus 97 ~~~~~~-~~~gd~V~v~~P~y~~~~---~~~~~~g~~~~~~~l~~~~~~-------------~~~~~~~~--~~~----- 152 (357)
T PRK14809 97 YLARAM-LDPGDTVLVPDPGFAYYG---MSARYHHGEVREYPVSKADDF-------------EQTADTVL--DAY----- 152 (357)
T ss_pred HHHHHh-cCCCCEEEEeCCChHHHH---HHHHHcCCeEEEEecccCcCC-------------CcCHHHHH--Hhh-----
Confidence 999998 688999998886554333 334556899999988542222 11456665 221
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC---CCC-CCCCCcEEEEec
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP---PDL-SKYPVDFVVMSF 273 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~---~d~-~~~~~D~~~~S~ 273 (508)
++++++++++++||||.++|.+++.++++. +++ +++||+|+++..-... +.. ...+.-+++.|+
T Consensus 153 --~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~---------~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~Sf 220 (357)
T PRK14809 153 --DGERIVYLTSPHNPTGSEIPLDEVEALAER---------TDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTF 220 (357)
T ss_pred --cCCcEEEEeCCCCCCCcCCCHHHHHHHHHh---------Ccc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecc
Confidence 356899999999999999999999999983 443 7899999998632111 111 111234788999
Q ss_pred cccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcCh
Q 010538 274 YKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTV 351 (508)
Q Consensus 274 ~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 351 (508)
+|.|| .+| +||+++++++++.+..... ....+.....+...+++. ...+
T Consensus 221 SK~~~-~~GlRiG~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~a~~~l~~--~~~~ 271 (357)
T PRK14809 221 SKAYG-LAGLRLGYAVVPEEWADAYARVNT--------------------------PFAASELACRAGLAALDD--DEHV 271 (357)
T ss_pred hhHhc-CcchhheeeecCHHHHHHHHHhCC--------------------------CCCCCHHHHHHHHHHhCC--HHHH
Confidence 99998 557 8999999988776654310 111222222222333321 1124
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 352 PAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 352 ~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
++..+.+++.++++.+.|... .+ ++. ++++++++++ ..++.+.|.++||.|++|
T Consensus 272 ~~~~~~~~~~r~~l~~~L~~~----------~~-~~~--------g~f~~~~~~~-------~~~~~~~l~~~gv~v~~g 325 (357)
T PRK14809 272 ERTVETARWAREYIREELDAP----------TW-ESA--------GNFVLAEVGD-------ASAVAEAAQERGVIVRDC 325 (357)
T ss_pred HHHHHHHHHHHHHHHHHhcCc----------cC-CCC--------CCEEEEECCC-------HHHHHHHHHHCCEEEEEC
Confidence 555666777777777777532 11 222 7888888742 234778888999999998
Q ss_pred CCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 432 CFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 432 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..|.. ++++|+|++ +.++++.+++.|+++++
T Consensus 326 ~~f~~-----------------------------------~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 326 TSFGL-----------------------------------PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ccCCC-----------------------------------CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 65421 468999987 68999999999988753
No 136
>PLN02590 probable tyrosine decarboxylase
Probab=99.92 E-value=6.9e-23 Score=218.06 Aligned_cols=373 Identities=11% Similarity=-0.032 Sum_probs=252.1
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCC-----CceEEEcCChH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMK-----DYKCIFTSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-----~~~i~~t~g~t 113 (508)
...-||.+-..+..++.++..++...+ .+....+..++....+...+.+++++++|.+.. .-.-+||+|+|
T Consensus 129 ~hP~f~a~~~~~~~~~~~lgd~l~sa~----n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgS 204 (539)
T PLN02590 129 QSPSYFAYYASSTSVAGFLGEMLNAGL----SVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGC 204 (539)
T ss_pred CCCCeeEeccCCCcHHHHHHHHHHHhc----ccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchH
Confidence 456788887777777777766655443 222233445566778888999999999999852 01478999999
Q ss_pred HHHHHHHhhcCC----------CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC--ccCcccccccccccccccc
Q 010538 114 AALKLVGEAFPW----------SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE--AVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 114 ~al~~~~~~l~~----------~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~--~~~~~~l~~~~~~~~~~~~ 181 (508)
+|+..++.+... .+.-+|++++..|+|+....+++.-....++.||.+. .+.+
T Consensus 205 eAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~m--------------- 269 (539)
T PLN02590 205 EAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGM--------------- 269 (539)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcC---------------
Confidence 998765544211 1223667788889988777766522112588899874 3456
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC-
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD- 260 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d- 260 (508)
|+++|+ ++|++....+..+.+|+.+...+.||.+.|+++|.++|++ +|+|++||+|++......+
T Consensus 270 d~~~L~--~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~------------~g~WlHVDaA~GG~al~~~~ 335 (539)
T PLN02590 270 PPESLE--EAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKK------------YGIWLHVDAAYAGNACICPE 335 (539)
T ss_pred CHHHHH--HHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHH------------hCCeEEEecchhhhhhcChh
Confidence 688888 7775433334567889999999999999999999999998 9999999999987553322
Q ss_pred C----CC-CCCcEEEEeccccccCCCcceEEEEechh--Hhhh--ccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 261 L----SK-YPVDFVVMSFYKIFGYPTGLGALIMRNDA--AKLL--KNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 261 ~----~~-~~~D~~~~S~~K~~g~P~G~G~l~~~~~~--~~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
. .. ..+|.++.++|||+..|.+||+++++++. ...+ .+.+..... .......++. ....+.+.
T Consensus 336 ~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~-~~~~~~~d~~------d~~i~lsR- 407 (539)
T PLN02590 336 YRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKV-SKKDTVVNYK------DWQISLSR- 407 (539)
T ss_pred hHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcc-cccccCCCcc------ccCCCCCC-
Confidence 1 11 14799999999998889999999999753 1111 121111100 0000000010 11122222
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC-
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS- 410 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 410 (508)
.+ ....++.+++.+...|+.++.++..+++++|.+.|++. ++++++.++. .++|+|+.......
T Consensus 408 r~-raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~------~~fel~~~~~--------l~iVcFr~~~~~~~~ 472 (539)
T PLN02590 408 RF-RSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD------PSFEVVTTRY--------FSLVCFRLAPVDGDE 472 (539)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCeEEecCCc--------eEEEEEEecCCCCCH
Confidence 22 35677788888888899999999999999999999987 4799998765 79999998642111
Q ss_pred -ccC--HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC-CCCCHH
Q 010538 411 -WFG--YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG-YMSTFE 486 (508)
Q Consensus 411 -~~~--~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~e 486 (508)
..+ ...+.+.+.+.|...-+.... ....++|+++. +.+|++
T Consensus 473 ~~~~~ln~~l~~~l~~~G~~~vs~t~~-----------------------------------~g~~~lR~~i~n~~T~~~ 517 (539)
T PLN02590 473 DQCNERNRELLAAVNSTGKIFISHTAL-----------------------------------SGKFVLRFAVGAPLTEEK 517 (539)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeEE-----------------------------------CCEEEEEEEecCCCCCHH
Confidence 011 134666666666664432210 01458999986 668899
Q ss_pred HHHHHHHhhhhhhhhh
Q 010538 487 DAKVNRCSSFDFVNFS 502 (508)
Q Consensus 487 ev~~l~~~~~~~~~~~ 502 (508)
||+.+++.|.+....+
T Consensus 518 dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 518 HVTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999998875443
No 137
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.7e-23 Score=213.21 Aligned_cols=347 Identities=10% Similarity=0.049 Sum_probs=218.3
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~a 115 (508)
++.+.|..+.... +++..++++.+..... ....|........+.+.+.+.+.+..|. ++++ +|++|+|+++|
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~-~I~it~G~~~a 107 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKP----KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPET-EVVATMGSKEG 107 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCC----ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-eEEECCChHHH
Confidence 4566676654332 3555666655433211 1112221111223333344444443464 4431 59999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC--ccCccccccccccccccccchh----hhhcC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE--AVDNDGLSESLVTSTKISLLPI----QRRKG 189 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~--~~~~~~l~~~~~~~~~~~~d~~----~l~~~ 189 (508)
+.+++.++ ..+|+.|++....|+.+... ++..|++++.+|++. ...+ |++ .++
T Consensus 108 l~~~~~~l-~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~---------------d~~~l~~~l~-- 166 (403)
T PRK08636 108 YVHLVQAI-TNPGDVAIVPDPAYPIHSQA---FILAGGNVHKMPLEYNEDFEL---------------DEDQFFENLE-- 166 (403)
T ss_pred HHHHHHHh-CCCCCEEEEcCCCCcchHHH---HHhcCCEEEEEeccccccCcc---------------ChhhhhhHHH--
Confidence 99999998 68899999998777666544 444699999998742 1223 333 334
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC-
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY- 264 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~- 264 (508)
+++++ ..++++++++++++||||.+++.+++.++++ +|++++++||+|.+++. +.....+..+
T Consensus 167 ~~~~~---~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~---------~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~ 234 (403)
T PRK08636 167 KALRE---SSPKPKYVVVNFPHNPTTATVEKSFYERLVA---------LAKKERFYIISDIAYADITFDGYKTPSILEVE 234 (403)
T ss_pred HHHhh---ccCCceEEEEeCCCCCCCccCCHHHHHHHHH---------HHHHcCcEEEEeccchhhccCCCCCCChhcCC
Confidence 33321 1357899999999999999999988888777 56679999999999763 2111222222
Q ss_pred ---CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHH
Q 010538 265 ---PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASI 339 (508)
Q Consensus 265 ---~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 339 (508)
+..+++.|++|.||.| | +||++.++++++.+..... ....++....+.++
T Consensus 235 ~~~~~~i~~~S~SK~~~~~-GlRiG~iv~~~~li~~~~~~~~-----------------------~~~~~~~~~~q~~~- 289 (403)
T PRK08636 235 GAKDVAVESYTLSKSYNMA-GWRVGFVVGNKKLVGALKKIKS-----------------------WLDYGMFTPIQVAA- 289 (403)
T ss_pred CccccEEEEEecccccCCc-cceeeeeeCCHHHHHHHHHHHH-----------------------HhcccCChHHHHHH-
Confidence 2346688999999745 6 8999999888776554310 00112233333332
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHH
Q 010538 340 RHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEK 419 (508)
Q Consensus 340 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 419 (508)
..+++.. ...++++++.+.+.++.+.+.|++. ++.+..+.+ +.++|+++++.... .+..++..
T Consensus 290 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~p~~--------g~~~~~~l~~~~~~-~~~~~l~~ 352 (403)
T PRK08636 290 TIALDGD-QSCVEEIRETYRKRRDVLIESFANA-------GWELQKPRA--------SMFVWAKIPEPARH-LGSLEFSK 352 (403)
T ss_pred HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCc--------ceEEEEECCCccCC-CCHHHHHH
Confidence 2333311 1235677788888889999999875 455554443 78999998742110 12234554
Q ss_pred -HHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 420 -LASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 420 -~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.++++||.+.+|..|... ..+++||+++ .+.++++..++.|+++
T Consensus 353 ~ll~~~gV~v~pg~~f~~~---------------------------------~~~~iRi~~~--~~~~~l~~~~~rl~~~ 397 (403)
T PRK08636 353 QLLTEAKVAVSPGIGFGEY---------------------------------GDEYVRIALI--ENENRIRQAARNIKKF 397 (403)
T ss_pred HHHHhCCEEEecchhhCcC---------------------------------CCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 566789999998755321 2579999997 5788888888888777
Q ss_pred hh
Q 010538 499 VN 500 (508)
Q Consensus 499 ~~ 500 (508)
++
T Consensus 398 l~ 399 (403)
T PRK08636 398 LK 399 (403)
T ss_pred HH
Confidence 64
No 138
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=4.1e-23 Score=211.70 Aligned_cols=325 Identities=15% Similarity=0.087 Sum_probs=212.7
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-c
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-A 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~ 163 (508)
...++++.+++++|.+ ++++++|+|+|+..++.++...+|++|+++...|+++...+ ...|++++.++.+. .
T Consensus 19 ~~~~~~~~la~~~~~~----~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~ 91 (352)
T cd00616 19 KVREFEKAFAEYLGVK----YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI---LLLGATPVFVDIDPDT 91 (352)
T ss_pred HHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH---HHcCCeEEEEecCCCc
Confidence 4678899999999963 57888899999999999986678999999998888775443 45699999999875 4
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
..+ |+++++ +.+ ++++++|++++ ++|...|+++|.++|++ +|
T Consensus 92 ~~~---------------d~~~l~--~~i------~~~~~~v~~~~---~~G~~~~~~~i~~l~~~------------~~ 133 (352)
T cd00616 92 YNI---------------DPELIE--AAI------TPRTKAIIPVH---LYGNPADMDAIMAIAKR------------HG 133 (352)
T ss_pred CCc---------------CHHHHH--Hhc------CcCCeEEEEEC---CCCCcCCHHHHHHHHHH------------cC
Confidence 444 678888 544 46789998765 68999999999999998 89
Q ss_pred eEEEEeccccCCCCCCCCC-CCCCcEEEEecc--ccccCCCcceEEEEec-hhHhhhccccccCceEEecccchhhhhhc
Q 010538 244 WMVLIDAAKGCVTQPPDLS-KYPVDFVVMSFY--KIFGYPTGLGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~-~~~~D~~~~S~~--K~~g~P~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
+++++|++|++|....+.. ....|+.++|+| |+++++.| |+++.++ ++.+.+++...++..... ..+.
T Consensus 134 i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--- 205 (352)
T cd00616 134 LPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKNLTTGEG-GAVVTNDEELAERARLLRNHGRDRDR----FKYE--- 205 (352)
T ss_pred CeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCCCcccCc-eEEEECCHHHHHHHHHHHHcCCCCCC----Cccc---
Confidence 9999999999987643211 112578888866 98874544 7777764 666656544322211000 0000
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCce
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (508)
.....+..+.+++ .+++.+....+++++.++.+++.+++++.|.++ ++++++.+.... ....++
T Consensus 206 -~~~~~~~~~~~~~------~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~------~g~~~~~~~~~~---~~~~~~ 269 (352)
T cd00616 206 -HEILGYNYRLSEI------QAAIGLAQLEKLDEIIARRREIAERYKELLADL------PGIRLPDVPPGV---KHSYHL 269 (352)
T ss_pred -cceeeeccCcCHH------HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCC------CCccCCCCCCCC---ceeeEE
Confidence 0000111112222 222222222346888889999999999999987 378887654310 113578
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhc----CCChhhhhhhhhcCCccCCCccccCCCCCceE
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYL----GLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAI 475 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 475 (508)
++|.+++..+ .+..++.+.|.++||.++. .|.+....... +.+.+.+..+ .....+.+
T Consensus 270 ~~~~~~~~~~--~~~~~v~~~L~~~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a--------------~~~~~~~l 331 (352)
T cd00616 270 YVIRLDPEAG--ESRDELIEALKEAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNA--------------EDLAERVL 331 (352)
T ss_pred EEEEECCcCC--CCHHHHHHHHHHCCCCeee--ecCccccCHhhhhccCCCcCCChHH--------------HHHHhCeE
Confidence 8888864101 3456799999999997653 45442210000 0000000000 00124789
Q ss_pred EEecCCCCCHHHHHHHHHhhh
Q 010538 476 RVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 476 Ris~~~~~t~eev~~l~~~~~ 496 (508)
|+++|.++|.+||++++++|+
T Consensus 332 ~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 332 SLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred EccCCCCCCHHHHHHHHHHhC
Confidence 999999999999999998864
No 139
>PRK07777 aminotransferase; Validated
Probab=99.92 E-value=9.3e-23 Score=212.22 Aligned_cols=348 Identities=11% Similarity=-0.009 Sum_probs=219.3
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC--CCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS--MKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~~i~~t~g~t~a 115 (508)
.+.+.|..+..... ++...+++.+.+ .. ....|.......++.+.+.+.+.+.+|.+ +++ +|++|+|+++|
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~-~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~a 97 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAI-AG----GVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDT-EVLVTVGATEA 97 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHH-hc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCCcHHH
Confidence 45666666553322 344444433322 21 11222222222334444444444456754 431 59999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+.+++.++ ..+|+.|++....|+++..+ ++..|.+++.++++..+.-. ..|+++++ +++
T Consensus 98 l~~~~~~~-~~~gd~vli~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~------------~~d~~~l~--~~~--- 156 (387)
T PRK07777 98 IAAAVLGL-VEPGDEVLLIEPYYDSYAAV---IAMAGAHRVPVPLVPDGRGF------------ALDLDALR--AAV--- 156 (387)
T ss_pred HHHHHHHh-cCCCCEEEEeCCCchhhHHH---HHHCCCEEEEeecCCccCCC------------cCCHHHHH--Hhc---
Confidence 99999888 57889999888777666544 44468999999887542110 11688888 554
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCC----CCCc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSK----YPVD 267 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~----~~~D 267 (508)
.+++++|++++++||||.+++.+++.++++ +|+++++++|+|++++. +.....+.. .+.+
T Consensus 157 ---~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~---------~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07777 157 ---TPRTRALIVNSPHNPTGTVLTAAELAAIAE---------LAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERT 224 (387)
T ss_pred ---CcccEEEEEcCCCCCCCccCCHHHHHHHHH---------HHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcE
Confidence 356899999999999999999666655555 44459999999999863 221122221 2467
Q ss_pred EEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
+++.|++|.|| .+| +|++++++++++.+...... .....+.+...++..++..
T Consensus 225 i~~~S~SK~~g-~~GlRiG~~~~~~~l~~~~~~~~~~------------------------~~~~~~~~~q~~~~~~l~~ 279 (387)
T PRK07777 225 VTISSAAKTFN-VTGWKIGWACGPAPLIAAVRAAKQY------------------------LTYVGGAPFQPAVAHALDH 279 (387)
T ss_pred EEEeechhhcc-CcCceeEEEecCHHHHHHHHHHHhh------------------------cccCCCCHHHHHHHHHHhC
Confidence 99999999998 447 79999998887665533110 0011122223333334432
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hhC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SLS 424 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~~ 424 (508)
. +..++.+++++.+.++++.+.|++. ++++..+.+ +.+++++++.... .+..++.+.| +++
T Consensus 280 ~-~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~g--------~~~~~~~~~~~~~--~~~~~~~~~l~~~~ 341 (387)
T PRK07777 280 E-DAWVAALRDSLQAKRDRLAAGLAEA-------GFEVHDSAG--------TYFLCADPRPLGY--DDGTEFCRALPERV 341 (387)
T ss_pred C-cHHHHHHHHHHHHHHHHHHHHHHhC-------CCCccCCCc--------ceEEEecccccCC--CCHHHHHHHHHHhC
Confidence 1 1225677788899999999999875 566554432 6778778753211 1234577777 578
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
||.|.+|..|.... ....+++|+|++. ..++++..++.|.+++.
T Consensus 342 gv~v~pg~~f~~~~------------------------------~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 342 GVAAIPMSVFYDPA------------------------------DAWNHLVRFAFCK--RDDTLDEAIRRLRALRG 385 (387)
T ss_pred CEEEeCchHhCCCC------------------------------cCCCCeEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 99999987553211 0125689999985 68999999998887653
No 140
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=4.4e-23 Score=215.10 Aligned_cols=338 Identities=13% Similarity=0.069 Sum_probs=215.2
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C----CCCCCceEEEc
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N----ASMKDYKCIFT 109 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~----~~~~~~~i~~t 109 (508)
.+.+.|+.+-.... ++.+.+++.+ ....... |.... ...++|+.+|+++ + +++++ +|++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~-~~~~~~~-----Y~~~~----G~~~lr~aia~~~~~~~~~~~~~~~~~-~i~it 96 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRE-NLHGLST-----YPTTK----GLPELRQAIARWLERRFDLPTGVDPER-HVLPV 96 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHH-HhhccCC-----CCCCC----CCHHHHHHHHHHHHHhhCCcccCCCCc-eEEEC
Confidence 56888887765544 4444455433 3222111 11111 1344566666665 3 45531 69999
Q ss_pred CChHHHHHHHHhhcCCCCCCe--EEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhh
Q 010538 110 SGATAALKLVGEAFPWSHQSS--YMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRR 187 (508)
Q Consensus 110 ~g~t~al~~~~~~l~~~~g~~--vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~ 187 (508)
+|+++++.+++.++ ..+|+. |+++...|+.+... ++..|++++.+|++.+..+ .+|++.++
T Consensus 97 ~Ga~~al~~~~~~l-~~~gd~~~vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~-------------~~d~~~l~ 159 (393)
T TIGR03538 97 NGTREALFAFAQAV-INPGQAPLVVMPNPFYQIYEGA---ALLAGAEPYFLNCTAENGF-------------LPDFDAVP 159 (393)
T ss_pred CCcHHHHHHHHHHH-cCCCCcceEEecCCCCcchHHH---HHhcCCeEEEeeccccCCC-------------CCCHHHHH
Confidence 99999999999998 567765 88777666655443 4556999999998643322 12577777
Q ss_pred cCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC-----CCCCC-
Q 010538 188 KGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT-----QPPDL- 261 (508)
Q Consensus 188 ~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~-----~~~d~- 261 (508)
+++ .++++++++++++||||.+++.+++.++++ +|++++++||+|+++..-. .+.+.
T Consensus 160 --~~~------~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~---------~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 222 (393)
T TIGR03538 160 --ESV------WRRCQLLFVCSPGNPTGAVLSLDTLKKLIE---------LADQYGFIIASDECYSELYFDEGNPPAGLL 222 (393)
T ss_pred --HHH------hhcceEEEEeCCCCCcCcccCHHHHHHHHH---------HHHHCCEEEEECcchhhcccCCCCCCcCHH
Confidence 443 347899999999999999999877777766 4556999999999986321 11111
Q ss_pred ---CC-----CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 262 ---SK-----YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 262 ---~~-----~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
.. .+--+++.|++|.|+.| | +||++.++++++.+..... ....+.
T Consensus 223 ~~~~~~~~~~~~~vi~i~S~SK~~~~~-GlRvG~~i~~~~l~~~~~~~~~------------------------~~~~~~ 277 (393)
T TIGR03538 223 QAAAQLGRDDFRRCLVFHSLSKRSNLP-GLRSGFVAGDAEILKAFLRYRT------------------------YHGCAM 277 (393)
T ss_pred HhcccccccccccEEEEecchhhcCCc-ccceEEEecCHHHHHHHHHHHH------------------------hhccCc
Confidence 11 12238899999987734 6 8999999888776553310 011122
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW 411 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 411 (508)
+.....++.+++.. +..++..++++++.++.+.+.|++. +.+..|.+ +.++|++++ .+.
T Consensus 278 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~--------~~~~~p~g--------g~f~~~~~~-~~~-- 336 (393)
T TIGR03538 278 PIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV--------LDLELPDA--------GFYLWPKVP-GDD-- 336 (393)
T ss_pred CHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh--------CcccCCCe--------eEEEEEECC-CCH--
Confidence 33333333333321 2236677788888888888888764 22333332 789999987 222
Q ss_pred cCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHH
Q 010538 412 FGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKV 490 (508)
Q Consensus 412 ~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~ 490 (508)
.++.+.| +++||.+.+|..|..... | +....+++|||++. +.++++.
T Consensus 337 ---~~~~~~l~~~~gV~v~pg~~f~~~~~--------------------~-------~~~~~~~~Ris~~~--~~~~l~~ 384 (393)
T TIGR03538 337 ---EAFARALYEEENVTVLPGRFLAREAE--------------------G-------VNPGEGRVRIALVA--PLEECVE 384 (393)
T ss_pred ---HHHHHHHHHHCCEEEeCCcccccccc--------------------C-------CCCCCCEEEEEecC--CHHHHHH
Confidence 2366555 678999999986542100 0 00125789999985 6899999
Q ss_pred HHHhhhhhh
Q 010538 491 NRCSSFDFV 499 (508)
Q Consensus 491 l~~~~~~~~ 499 (508)
.++.|.+++
T Consensus 385 ~l~~l~~~~ 393 (393)
T TIGR03538 385 AAERIRSFI 393 (393)
T ss_pred HHHHHHHhC
Confidence 998887753
No 141
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.92 E-value=6.3e-23 Score=214.00 Aligned_cols=335 Identities=13% Similarity=0.074 Sum_probs=218.0
Q ss_pred CCCeeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------CCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------ASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~~i~~t~g 111 (508)
++.+.|..+... ++++.+.+++ ..+......+. ..|.. ......+|+.++++++ ++++ +|++|+|
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~-~~~~~~~~~~~-~~y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~G 104 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEAL-RELAEEEDPGL-HGYMP----NAGYPEVREAIAESLNRRFGTPLTAD--HIVMTCG 104 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHH-HHHHhcCCcCc-ccCCC----CCCCHHHHHHHHHHHHHHhCCCCCcC--cEEEeCC
Confidence 456777665543 3355555554 33433211111 11211 1234556777777764 5677 8999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCccccccccccccccccchhhhhcCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
+++++.+++.++ ..+|+.|+++...|+.+ ...++..|++++.+|.+.+ ..+ |+++++ +
T Consensus 105 ~~~al~~~~~~l-~~~gd~Vli~~p~~~~~---~~~~~~~g~~v~~v~~~~~~~~~---------------d~~~l~--~ 163 (394)
T PRK06836 105 AAGALNVALKAI-LNPGDEVIVFAPYFVEY---RFYVDNHGGKLVVVPTDTDTFQP---------------DLDALE--A 163 (394)
T ss_pred hHHHHHHHHHHh-cCCCCEEEEcCCCCccH---HHHHHHcCCEEEEEecCCccCcC---------------CHHHHH--h
Confidence 999999999998 67899999888655554 4455667999999998754 334 688888 5
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC------CCeEEEEeccccC----CCCCCC
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK------GRWMVLIDAAKGC----VTQPPD 260 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~------~g~~vivD~a~~~----g~~~~d 260 (508)
++ ++++++|++++++||||.++|.+++.++++ +|++ ||+++++|+++.. +.....
T Consensus 164 ~~------~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~---------la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 228 (394)
T PRK06836 164 AI------TPKTKAVIINSPNNPTGVVYSEETLKALAA---------LLEEKSKEYGRPIYLISDEPYREIVYDGAEVPY 228 (394)
T ss_pred hc------CcCceEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHhhhccCCCeEEEEeccccccccCCCCCCC
Confidence 55 457899999999999999999998888877 5666 7999999999863 111111
Q ss_pred -CCCCCCcEEEEeccccccCCCc--ceEEEEechhHhh--hccccccCceEEecccchhhhhhccCccccccCCCCChhH
Q 010538 261 -LSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKL--LKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLS 335 (508)
Q Consensus 261 -~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~--l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 335 (508)
....+..+++.|++|.+|.| | +||++++++..+. +....... .+.......+...
T Consensus 229 ~~~~~~~~i~~~S~SK~~~~p-GlRiG~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~ 288 (394)
T PRK06836 229 IFKYYDNSIVVYSFSKSLSLP-GERIGYIAVNPEMEDADDLVAALVFA-------------------NRILGFVNAPALM 288 (394)
T ss_pred hHHccCcEEEEecchhhccCc-ceeeEEEecCHHHhhhHHHHHHHHHH-------------------hhccccccCCHHH
Confidence 22334568899999999844 6 8999998765321 11100000 0000000112222
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHH
Q 010538 336 IASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYR 415 (508)
Q Consensus 336 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 415 (508)
..++ ..++.+ + ...+++.+.++.+.+.|++. ++.+..+.+ +.++|++++.. +..
T Consensus 289 q~~~---~~~l~~-~--~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~g--------g~~~~~~~~~~-----~~~ 342 (394)
T PRK06836 289 QRVV---AKCLDA-T--VDVSIYKRNRDLLYDGLTEL-------GFECVKPQG--------AFYLFPKSPEE-----DDV 342 (394)
T ss_pred HHHH---HHHhCC-h--HHHHHHHHHHHHHHHHHHhC-------CCEeecCCc--------eEEEEEeCCCC-----CHH
Confidence 2222 223222 1 12456677788888888775 566654443 67788777653 234
Q ss_pred HHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 416 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 416 ~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
++.+.|.++||.+.+|..|.. ++++||+++ .++++++..++.|
T Consensus 343 ~~~~~l~~~gv~v~~g~~f~~-----------------------------------~~~iRi~~~--~~~~~~~~~i~~l 385 (394)
T PRK06836 343 AFCEKAKKHNLLLVPGSGFGC-----------------------------------PGYFRLSYC--VDTETIERSLPAF 385 (394)
T ss_pred HHHHHHHhCCEEEECchhcCC-----------------------------------CCeEEEEec--CCHHHHHHHHHHH
Confidence 577888999999999864421 478999998 4799999999999
Q ss_pred hhhhh
Q 010538 496 FDFVN 500 (508)
Q Consensus 496 ~~~~~ 500 (508)
+++++
T Consensus 386 ~~~l~ 390 (394)
T PRK06836 386 EKLAK 390 (394)
T ss_pred HHHHH
Confidence 88764
No 142
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=5.9e-23 Score=215.42 Aligned_cols=340 Identities=12% Similarity=0.055 Sum_probs=219.0
Q ss_pred CCCeeeeCCCCC-----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------------CCC
Q 010538 39 NGTVYLDHAGAT-----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------------ASM 101 (508)
Q Consensus 39 ~~~iyld~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------------~~~ 101 (508)
++.+-|..+... .+++.+.+++.+.+ .. .....|... .....+|+.+|++++ +++
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~-~~---~~~~~Y~~~----~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAV-DS---QECNGYPPT----VGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHh-hc---CCCCCCCCC----CCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 677777776654 34666666554332 21 111122211 123556777777665 567
Q ss_pred CCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc--cCcccccccccccccc
Q 010538 102 KDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA--VDNDGLSESLVTSTKI 179 (508)
Q Consensus 102 ~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~--~~~~~l~~~~~~~~~~ 179 (508)
+ +|++|+|+++++.+++.++ ..+|++|+++...|+.+.. .++..|++++.+|++.+ ..+
T Consensus 105 ~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P~y~~~~~---~~~~~g~~~~~i~~~~~~~~~~------------- 165 (412)
T PTZ00433 105 D--NVVLCSGVSHAILMALTAL-CDEGDNILVPAPGFPHYET---VCKAYGIEMRFYNCRPEKDWEA------------- 165 (412)
T ss_pred h--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCcccHHH---HHHHcCCEEEEEecCccccCcC-------------
Confidence 7 8999999999999999998 6789999999877766544 45557999999998642 233
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC----
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV---- 255 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g---- 255 (508)
|+++++ +++ .+++++|++++++||||.+++.+++.++++ +|+++|++||+|+++..-
T Consensus 166 --d~~~l~--~~~------~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~---------~a~~~~~~ii~De~y~~~~~~~ 226 (412)
T PTZ00433 166 --DLDEIR--RLV------DDRTKALIMTNPSNPCGSNFSRKHVEDIIR---------LCEELRLPLISDEIYAGMVFNG 226 (412)
T ss_pred --CHHHHH--HHh------ccCceEEEEeCCCCCCCcccCHHHHHHHHH---------HHHHcCCeEEEeccccccccCC
Confidence 678887 444 346899999999999999999877766665 455599999999998631
Q ss_pred CCCCCCCCC---CCcEEEEeccccccCCCc--ceEEEEe------chhHhhhccccccCceEEecccchhhhhhccCccc
Q 010538 256 TQPPDLSKY---PVDFVVMSFYKIFGYPTG--LGALIMR------NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEE 324 (508)
Q Consensus 256 ~~~~d~~~~---~~D~~~~S~~K~~g~P~G--~G~l~~~------~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (508)
....++... ..-+++.|++|.||.| | +||+++. +++++.+....
T Consensus 227 ~~~~~~~~~~~~~~~i~~~SfSK~~~~p-GlRlG~~i~~~p~~~~~~~~~~~~~~~------------------------ 281 (412)
T PTZ00433 227 ATFTSVADFDTTVPRVILGGTAKNLVVP-GWRLGWLLLVDPHGNGGDFLDGMKRLG------------------------ 281 (412)
T ss_pred CCccchhhccCCCceEEEccchhhcCCC-CeeEEEEEEeCCcccHHHHHHHHHHHh------------------------
Confidence 111122211 1237889999999835 7 8999972 23443332210
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEe
Q 010538 325 LFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNL 404 (508)
Q Consensus 325 ~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (508)
......+.....++..++..-.+..++++++++++.++.+.+.|++.. ++.+..|.+ +.++++++
T Consensus 282 -~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~p~g--------g~f~~~~l 346 (412)
T PTZ00433 282 -MLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECI------GLSPTMPRG--------SMFLMSRL 346 (412)
T ss_pred -hccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC------CCcccCCCe--------eEEEEEEe
Confidence 001122333333333343310112367778888888999999998752 455554443 78889888
Q ss_pred eCCCC-CccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCC
Q 010538 405 KRPDG-SWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYM 482 (508)
Q Consensus 405 ~~~~~-~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 482 (508)
+...- ...+..++.+.| +++||.+++|..|.. .+++|+|++.
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------------------------------~~~iRis~~~- 390 (412)
T PTZ00433 347 DLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM-----------------------------------PGFTRLTISR- 390 (412)
T ss_pred chhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC-----------------------------------CCeEEEEecC-
Confidence 64100 001223456665 468999999875421 4789999985
Q ss_pred CCHHHHHHHHHhhhhhhhh
Q 010538 483 STFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 483 ~t~eev~~l~~~~~~~~~~ 501 (508)
..++++..++.+.++++-
T Consensus 391 -~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 391 -PVEVLREAVERIKAFCER 408 (412)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 488899999988887754
No 143
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=1.6e-22 Score=215.19 Aligned_cols=352 Identities=12% Similarity=0.065 Sum_probs=235.9
Q ss_pred CCeeeeCCCCCC----CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHH
Q 010538 40 GTVYLDHAGATL----YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAA 115 (508)
Q Consensus 40 ~~iyld~~~~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~a 115 (508)
+.-|+|.++... .+|.+.+++.+.+. . ++.........+...+...+++++++++++.+ + .|++++|++ +
T Consensus 108 G~~~id~~s~~~lgl~~~~~i~ea~~~al~-~-~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~-~--~i~~s~G~~-a 181 (481)
T PLN02822 108 GKDVVNFASANYLGLIGNEKIKESCTSALE-K-YGVGSCGPRGFYGTIDVHLDCETKIAKFLGTP-D--SILYSYGLS-T 181 (481)
T ss_pred CceEEEeECCCcCCCCCCHHHHHHHHHHHH-H-hCCCCcccCccccCHHHHHHHHHHHHHHhCCC-C--EEEECCHHH-H
Confidence 444555543322 47778887766543 2 22111111111235677889999999999975 4 699998877 6
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+..++.++ .++|+.|++....|.++.....+ .|.+++.++.++...+. .++++++ +..
T Consensus 182 ~~sai~a~-~~~gd~Ii~d~~~H~s~~~~~~l---s~~~~~~~~~nd~~~l~-------------~~l~~~~--~~~--- 239 (481)
T PLN02822 182 IFSVIPAF-CKKGDIIVADEGVHWGIQNGLYL---SRSTIVYFKHNDMESLR-------------NTLEKLT--AEN--- 239 (481)
T ss_pred HHHHHHHh-CCCCCEEEEeCCccHHHHHHHHH---cCCeEEEECCCCHHHHH-------------HHHHHHh--hhh---
Confidence 78888888 67899999998888877655544 37788888876422221 1234443 111
Q ss_pred CCCCCCc-eEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC---------CCCCCCC
Q 010538 196 DPAGDAY-NLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP---------PDLSKYP 265 (508)
Q Consensus 196 ~~~~~~t-~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~---------~d~~~~~ 265 (508)
...+++ ++|++..+++++|.+.|+++|.++|++ ||+++++|++|++|... .++....
T Consensus 240 -~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k------------~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~ 306 (481)
T PLN02822 240 -KRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEK------------YRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEK 306 (481)
T ss_pred -cccCCCcEEEEEecCCCCCCCccCHHHHHHHHHH------------cCCEEEEECCccccccCCCCCChHHHcCCCCCC
Confidence 012344 799999999999999999999999998 99999999999966532 2232235
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
+|++++|++|.+| +.| |+++++++.++.++.. +. ...| .++.+....++..++++.
T Consensus 307 ~dii~~s~sKalg-~~G-G~i~g~~~ii~~~~~~--~~-------------------~~~f-sa~lPp~~~~Aa~~aL~~ 362 (481)
T PLN02822 307 IDIITAAMGHALA-TEG-GFCTGSARVVDHQRLS--SS-------------------GYVF-SASLPPYLASAAITAIDV 362 (481)
T ss_pred CeEEEecchhhhh-hCC-eEEEcCHHHHHHHHhc--CC-------------------ceee-ccccCHHHHHHHHHHHHH
Confidence 7999999999999 777 9999999887765532 11 1112 222233334444457877
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc-C---HHHHHHHH
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF-G---YREVEKLA 421 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~---~~~l~~~L 421 (508)
+.. ..++.++++++++++++.|++.. ++.+..+.. ++++++.+++..+..- + ..++.+.|
T Consensus 363 l~~--~~~~~~~l~~~~~~l~~~L~~~~------g~~~~~~~~--------spi~~l~l~~~~~~~~~~~~~~~~~~~~L 426 (481)
T PLN02822 363 LED--NPSVLAKLKENIALLHKGLSDIP------GLSIGSNTL--------SPIVFLHLEKSTGSAKEDLSLLEHIADRM 426 (481)
T ss_pred HHh--CHHHHHHHHHHHHHHHHHHHhcC------CcccCCCCC--------CCEEEEEeCCCcccccchHHHHHHHHHHH
Confidence 654 36788999999999999998863 566654443 7899898864311000 1 13456665
Q ss_pred -hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 422 -SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 422 -~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.++||.+.++.....+. ...+..+|++++..+|.+||+++++.|+++++
T Consensus 427 l~e~GV~v~~~~~~~~~~------------------------------~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~ 476 (481)
T PLN02822 427 LKEDSVLVVVSKRSTLDK------------------------------CRLPVGIRLFVSAGHTESDILKASESLKRVAA 476 (481)
T ss_pred HhcCCEEEEeeCCCCcCC------------------------------CCCCCcEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 58899998764321110 00135799999999999999999999998776
Q ss_pred hh
Q 010538 501 FS 502 (508)
Q Consensus 501 ~~ 502 (508)
.+
T Consensus 477 ~~ 478 (481)
T PLN02822 477 SV 478 (481)
T ss_pred HH
Confidence 53
No 144
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=7.8e-23 Score=214.29 Aligned_cols=339 Identities=12% Similarity=0.053 Sum_probs=220.8
Q ss_pred CCCeeeeCCCCC-----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------CCCCCceEE
Q 010538 39 NGTVYLDHAGAT-----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------ASMKDYKCI 107 (508)
Q Consensus 39 ~~~iyld~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~~i~ 107 (508)
++.+.|.-+-.. ++++.+.+++.+.+... ....|... ....++|+.++++++ ++++ +|+
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~----~G~~~lr~~ia~~~~~~~g~~~~~~--~i~ 100 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSN----KFNGYAPT----VGLPQARRAIAEYLSRDLPYKLSLD--DVF 100 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcC----CCCCCCCC----CCCHHHHHHHHHHHHHhcCCCCCcc--cEE
Confidence 578888877654 44666666654433221 11122111 113455666666653 5677 899
Q ss_pred EcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-c-Cccccccccccccccccchhh
Q 010538 108 FTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-V-DNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 108 ~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~-~~~~l~~~~~~~~~~~~d~~~ 185 (508)
+|+|+++|+.+++.++ ..+|++|+++...|+.+.... +..|++++.+|++.+ + .+ |++.
T Consensus 101 ~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~i~~~~~~~~~~---------------d~~~ 161 (409)
T PLN02656 101 ITSGCTQAIDVALSML-ARPGANILLPRPGFPIYELCA---AFRHLEVRYVDLLPEKGWEV---------------DLDA 161 (409)
T ss_pred EeCChHHHHHHHHHHH-hCCCCeEEEeCCCCCcHHHHH---HHcCCEEEEEeCCCcCCCCC---------------CHHH
Confidence 9999999999999998 688999999998887665443 336999999998532 2 23 6788
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCC
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDL 261 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~ 261 (508)
++ +++ +++++++++++++||||.+++.+++.++++ +|+++|++||+|++++. +....++
T Consensus 162 l~--~~~------~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (409)
T PLN02656 162 VE--ALA------DQNTVALVIINPGNPCGNVYSYQHLKKIAE---------TAEKLKILVIADEVYGHLAFGSNPFVPM 224 (409)
T ss_pred HH--HHh------ccCceEEEEECCCCCCCCCCCHHHHHHHHH---------HHHHcCCEEEEehhhhhcccCCCCcccH
Confidence 87 444 457899999999999999998777766665 45569999999999863 1111222
Q ss_pred C---CCCCcEEEEeccccccCCCc--ceEEEEe--------chhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 262 S---KYPVDFVVMSFYKIFGYPTG--LGALIMR--------NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 262 ~---~~~~D~~~~S~~K~~g~P~G--~G~l~~~--------~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
. ....-+++.|++|.|+.| | +||++++ +++++.+.... . . .
T Consensus 225 ~~~~~~~~vi~~~SfSK~f~~p-GlRiG~~i~~~~~~~~~~~~~~~~~~~~~-----------------------~-~-~ 278 (409)
T PLN02656 225 GVFGSIVPVLTLGSLSKRWIVP-GWRLGWFVTTDPSGSFRDPKIVERIKKYF-----------------------D-I-L 278 (409)
T ss_pred HHhcccCcEEEEcccchhccCc-ceeEEEEEEeCcccccccHHHHHHHHHHH-----------------------h-h-h
Confidence 1 112347889999998845 7 8999985 34544443220 0 0 1
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe-cCCCCCcccCCCCceEEEEeeCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY-GTYTSEVSYHDTGSMVSFNLKRP 407 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~ 407 (508)
+.++.....++..+++...+..+++.++++++.++++.+.|++++ ++... .|.+ +.++|++++..
T Consensus 279 ~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~------~~~~~~~p~g--------g~~~w~~l~~~ 344 (409)
T PLN02656 279 GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIP------CITCPHKPEG--------SMAVMVKLNLS 344 (409)
T ss_pred cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCC------CCcCCcCCCe--------EEEEEEecchh
Confidence 223444444444455421112367777888888899999998762 33222 2322 67888887531
Q ss_pred CCCcc-CH-HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 408 DGSWF-GY-REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 408 ~~~~~-~~-~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
.-..+ +. ..+.+.+.++||.+.+|..|.. .+++|||++. +.
T Consensus 345 ~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~-----------------------------------~~~iRi~~~~--~~ 387 (409)
T PLN02656 345 LLEDISDDIDFCFKLAREESVIILPGTAVGL-----------------------------------KNWLRITFAA--DP 387 (409)
T ss_pred hcCCCCCHHHHHHHHHHhCCEEEecchhcCC-----------------------------------CCeEEEEeCC--CH
Confidence 00001 11 2356788899999999875521 5789999995 78
Q ss_pred HHHHHHHHhhhhhhh
Q 010538 486 EDAKVNRCSSFDFVN 500 (508)
Q Consensus 486 eev~~l~~~~~~~~~ 500 (508)
++++..++.|++++.
T Consensus 388 e~l~eal~rl~~~~~ 402 (409)
T PLN02656 388 SSLEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888887654
No 145
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.92 E-value=6.9e-23 Score=216.76 Aligned_cols=307 Identities=18% Similarity=0.142 Sum_probs=216.2
Q ss_pred hHHHHHHHHHHHHHcC--CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 83 CDIVRAAREQVLDYFN--ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~--~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
..+.+.+.+.++...| ++++ +|++|+|+++|+.+++..+ .++||.|++.+ |++......++..|++++.||+
T Consensus 135 ~~LR~~ia~~l~~~~g~~~~~~--~IiiT~G~q~al~l~~~~l-~~pGd~v~vE~---PtY~~~~~~~~~~g~~~~~vp~ 208 (459)
T COG1167 135 PELREAIAAYLLARRGISCEPE--QIVITSGAQQALDLLLRLL-LDPGDTVLVED---PTYPGALQALEALGARVIPVPV 208 (459)
T ss_pred HHHHHHHHHHHHHhcCCccCcC--eEEEeCCHHHHHHHHHHHh-CCCCCEEEEcC---CCcHHHHHHHHHcCCcEEecCC
Confidence 3444444444432233 5677 8999999999999999999 67999999555 7777777788888999999999
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCc-eEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAY-NLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPF 239 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t-~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~ 239 (508)
|++|- |++.++ ..+++. ++ .++++++.+||||.+++.+.-.++++ +|
T Consensus 209 d~~G~----------------~~e~le--~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~---------lA 256 (459)
T COG1167 209 DEDGI----------------DPEALE--EALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLA---------LA 256 (459)
T ss_pred CCCCC----------------CHHHHH--HHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHH---------HH
Confidence 86554 488888 666432 33 45566999999999999997777776 66
Q ss_pred CCCCeEEEEeccccC----CCCCCCCCCC---CCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEeccc
Q 010538 240 SKGRWMVLIDAAKGC----VTQPPDLSKY---PVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIA 311 (508)
Q Consensus 240 ~~~g~~vivD~a~~~----g~~~~d~~~~---~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 311 (508)
+++|++||.|+.++. +..+.++..+ +.-++++|++|++. |+ .+||+++++++++++...-.
T Consensus 257 ~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~---------- 325 (459)
T COG1167 257 EKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQ---------- 325 (459)
T ss_pred HHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHH----------
Confidence 679999999999874 2333233333 45599999999999 84 28999999998876654311
Q ss_pred chhhhhhccCccccccCCCCChhHHHHHHHHHH--HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCC
Q 010538 312 DIDFVKRRQGVEELFEDGTASFLSIASIRHGFN--LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTS 389 (508)
Q Consensus 312 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~--~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~ 389 (508)
....++ +......+..-+. .+ +..+..+++.+.+.++.+.+.|.+..+ +.+++..|.+
T Consensus 326 -------------~~~~~~-s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~~----~~~~~~~p~g- 385 (459)
T COG1167 326 -------------AADLGP-SSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYLP----ELATWTRPEG- 385 (459)
T ss_pred -------------HhcCCC-ChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCC----CCeeeecCCc-
Confidence 111122 2222222222222 11 123678888888899999999988741 3556665554
Q ss_pred CcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeecc-CCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccC
Q 010538 390 EVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRT-GCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIH 468 (508)
Q Consensus 390 ~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~-g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 468 (508)
+.++|+++++. ++...+.+.+.++|+.+.+ |..+....
T Consensus 386 -------G~flwl~l~~~----~~~~~l~~~a~~~gv~i~~~g~~f~~~~------------------------------ 424 (459)
T COG1167 386 -------GLFLWLELPEG----IDARELLAAALEKGVVVTPLGSAFSADG------------------------------ 424 (459)
T ss_pred -------eEEEEEEcCCC----CCHHHHHHHHHHCCCEEEcCCccccCCC------------------------------
Confidence 78999999875 3445688888899999998 87655431
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 469 GKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 469 ~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
...+.+|+|++... .+++++.++.+.+.++.
T Consensus 425 -~~~~~~Rl~~s~~~-~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 425 -DPRNGLRLSFSSPS-EEEIEEGIKRLAALLRE 455 (459)
T ss_pred -CCCCeEEEEcCCCC-HHHHHHHHHHHHHHHHH
Confidence 12568999999654 88888888887776643
No 146
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.7e-23 Score=213.43 Aligned_cols=293 Identities=14% Similarity=0.111 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCC-CeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQ-SSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA- 163 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g-~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~- 163 (508)
..++|+.+|+++|++++ +|++|+|+++++.+++.++ ..+| ++|+++...|+.+ ...++..|.+++.+|++.+
T Consensus 61 ~~~lr~~ia~~~~~~~~--~I~~t~G~~~~l~~~~~~~-~~~g~~~vlv~~p~y~~~---~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 61 PPGLRSALAALYGCAPE--QLLIGRGSDEAIDLLVRAL-CVPGRDAVLVTPPVFGMY---AVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHHhCcChH--HEEEeCCHHHHHHHHHHHh-cCCCCCeEEEcCCChHHH---HHHHHHcCCEEEEEecCCCc
Confidence 36789999999999998 8999999999999999998 4556 7888877544433 3344557999999998431
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
..+ ..|++++. +++ ..+++++|++++++||||.++|.+++.++++. |+ ++
T Consensus 135 ~~~-------------~~d~~~l~--~~~-----~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~---------~~-~~ 184 (364)
T PRK04781 135 DGF-------------HADVPAIV--AAA-----LASNAKLVFLCSPSNPAGSAIALDQIERALQA---------LQ-GK 184 (364)
T ss_pred cCC-------------CcCHHHHH--HHH-----hccCCeEEEEcCCCCCCCCCcCHHHHHHHHHh---------CC-CC
Confidence 111 11456654 221 24678999999999999999999999999984 44 47
Q ss_pred eEEEEeccccCCCC---CCCC-CCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhh
Q 010538 244 WMVLIDAAKGCVTQ---PPDL-SKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 244 ~~vivD~a~~~g~~---~~d~-~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
++||+|+++..-.. .... ...+.-+++.|++|.|| .+| +||+++++++++.+......
T Consensus 185 ~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~g-l~GlRvGy~v~~~~l~~~l~~~~~~--------------- 248 (364)
T PRK04781 185 ALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHA-LAAARIGSLIANAELIAVLRRCQAP--------------- 248 (364)
T ss_pred cEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcc-cccceeeeeeCCHHHHHHHHhccCC---------------
Confidence 89999999863211 1111 12223488899999998 557 89999999988776644111
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTG 397 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (508)
.+.+.....++..+++--......+..+++.+.++.+.+.|++++ ++..+.|+. +
T Consensus 249 -----------~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~p~~--------g 303 (364)
T PRK04781 249 -----------YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLP------GVRRVYPSQ--------G 303 (364)
T ss_pred -----------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCeECCCC--------C
Confidence 112222222222233210000133445567788889999998763 553333433 7
Q ss_pred ceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 398 SMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 398 ~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
+++++++++ . .++.+.|.++||.|++|..+.. .++++||
T Consensus 304 ~f~~~~~~~--~-----~~~~~~l~~~gI~v~~~~~~~~----------------------------------~~~~~Ri 342 (364)
T PRK04781 304 NFLLVRFDD--A-----EAAFQALLAAGVVVRDQRAAPR----------------------------------LSDALRI 342 (364)
T ss_pred cEEEEEcCC--H-----HHHHHHHHHCCeEEeeCCCCCC----------------------------------CCCeEEE
Confidence 889988853 1 3478888999999998753311 1578999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~ 499 (508)
+++ +.++.++++++|+++.
T Consensus 343 s~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 343 TLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred eCC---CHHHHHHHHHHHHHHH
Confidence 999 8999999999998753
No 147
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=212.66 Aligned_cols=357 Identities=11% Similarity=0.061 Sum_probs=222.5
Q ss_pred hHHHHHHhhccCC-CCCeeeeCCCCC-----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc--
Q 010538 26 IDQIRATEFKRLE-NGTVYLDHAGAT-----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF-- 97 (508)
Q Consensus 26 ~~~~r~~~f~~~~-~~~iyld~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-- 97 (508)
+.++++ .+..-. ++.|.|.-+-.. ++|+.+.+++.+..... ....|..... ...+|+++|+++
T Consensus 19 ~~~~~~-~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~----~~~~Y~~~~G----~~~lr~aia~~~~~ 89 (409)
T PLN00143 19 VKFLKE-NFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA----KFNSYAPTGG----ILPARRAIADYLSN 89 (409)
T ss_pred HHHHHH-hcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc----CCCCCCCCCC----CHHHHHHHHHHHHh
Confidence 556665 554332 678888877664 55666666665543211 0111211111 344566666665
Q ss_pred ----CCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccc
Q 010538 98 ----NASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 98 ----~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~ 173 (508)
+++++ +|++|+|+++++.+++.++ ..+|+.|+++...|+.+.... +..|.+++.++++....+
T Consensus 90 ~~g~~~~~~--~I~it~G~~~al~~~~~~l-~~~gd~v~v~~P~y~~~~~~~---~~~g~~~~~~~~~~~~~~------- 156 (409)
T PLN00143 90 DLPYQLSPD--DVYLTLGCKHAAEIIIKVL-ARPEANILLPRPGFPDVETYA---IFHHLEIRHFDLLPEKGW------- 156 (409)
T ss_pred hcCCCCCHh--hEEEecChHHHHHHHHHHH-cCCCCEEEEcCCCCcCHHHHH---HHcCCEEEEEeccCCCCC-------
Confidence 45777 8999999999999999998 688999999887777665444 446999999987532111
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG 253 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~ 253 (508)
.+|+++++ +++ .++++++++++++||||.+++.+++.++++ +|++++++||+|+++.
T Consensus 157 ------~~d~~~l~--~~~------~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~---------~a~~~~~~ii~De~Y~ 213 (409)
T PLN00143 157 ------EVDLDAVE--AIA------DENTIAMVIINPGNPCGSVYSYEHLNKIAE---------TARKLGILVIADEVYG 213 (409)
T ss_pred ------cCCHHHHH--Hhc------ccCCEEEEEECCCCCCCCccCHHHHHHHHH---------HHHHcCCeEEEEcccc
Confidence 12688888 544 456789999999999999999887777766 4556999999999986
Q ss_pred C---CCCC-CCCC---CCCCcEEEEeccccccCCCc--ceEEEEe-c-hhHhhh---ccccccCceEEecccchhhhhhc
Q 010538 254 C---VTQP-PDLS---KYPVDFVVMSFYKIFGYPTG--LGALIMR-N-DAAKLL---KNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 254 ~---g~~~-~d~~---~~~~D~~~~S~~K~~g~P~G--~G~l~~~-~-~~~~~l---~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
. ...+ ..+. ....-+++.|++|.|+.| | +||++++ + .+++.+ .... .
T Consensus 214 ~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~p-GlRvG~~v~~~p~~~~~~~~~~~~~~-~----------------- 274 (409)
T PLN00143 214 HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIP-GWGLGWLVTCDPSGLLQICEIADSIK-K----------------- 274 (409)
T ss_pred ccccCCCCCcchhhhcccCcEEEEccchhhcCCC-ccceEEEEeeCchhhhhhHHHHHHHH-H-----------------
Confidence 3 1111 1211 112347889999998844 7 8999984 3 232111 1000 0
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCce
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (508)
....... .+.....++..+++-.....+++..+++++.++++.+.|.+++ +.....++. .+.+
T Consensus 275 ---~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~------~~~~~~~p~-------gg~f 337 (409)
T PLN00143 275 ---ALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIP------CIMCPQKAE-------GAFF 337 (409)
T ss_pred ---HHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCCCCCC-------eeEE
Confidence 0000011 1333333444344310011356677777888888888887752 222222222 2789
Q ss_pred EEEEeeCC--CCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 400 VSFNLKRP--DGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 400 v~~~~~~~--~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
+|++++.. ++..-+...+.+++.++||.+.+|..|. ..+++||
T Consensus 338 ~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------------------~~~~iRi 382 (409)
T PLN00143 338 ALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG-----------------------------------LKNWLRI 382 (409)
T ss_pred EEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------------------CCCeEEE
Confidence 99998642 1100011234466688999999987541 1578999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+++ .+.++++..++.|+++++
T Consensus 383 ~~~--~~~~~l~~al~rl~~~l~ 403 (409)
T PLN00143 383 TFA--VEQSSLEDGLGRLKSFCG 403 (409)
T ss_pred EEc--CCHHHHHHHHHHHHHHHH
Confidence 999 368888888888887654
No 148
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=1.7e-22 Score=210.15 Aligned_cols=342 Identities=14% Similarity=0.092 Sum_probs=217.3
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC--CCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN--ASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~~~~~~i~~t~g~t~a 115 (508)
.+.+.|..+....+ ++.+.+++ ...... .....|........+.+++.+.+.+..| .+++ +|++|+|+++|
T Consensus 29 ~~~i~l~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~a 102 (386)
T PRK07550 29 GPLIDLSQAVPGYPPPPELLRAL-AEAAAD---PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPE--QVHITSGCNQA 102 (386)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHH-HHHHhC---cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHH
Confidence 35677776664444 34444443 333221 1111221111223344444444444444 5667 89999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+.+++.++ ..+|+.|+++...|+.+.. .++..|++++.++.+....+ .+|+++++ +++
T Consensus 103 l~~~~~~l-~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~-------------~~~~~~l~--~~~--- 160 (386)
T PRK07550 103 FWAAMVTL-AGAGDEVILPLPWYFNHKM---WLDMLGIRPVYLPCDEGPGL-------------LPDPAAAE--ALI--- 160 (386)
T ss_pred HHHHHHHh-cCCCCEEEEcCCCCcchHH---HHHhcCCEEEEEecCCCcCC-------------CCCHHHHH--HHh---
Confidence 99999998 5789999998877766544 34567999999998742222 12577788 554
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC----CCCCCCC---CC-CCc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV----TQPPDLS---KY-PVD 267 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g----~~~~d~~---~~-~~D 267 (508)
.+++++|++++++||||.++|.+.+.++++ +|+++|++||+|++++.. ..+..+. .. ...
T Consensus 161 ---~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~---------~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~ 228 (386)
T PRK07550 161 ---TPRTRAIALVTPNNPTGVVYPPELLHELYD---------LARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTL 228 (386)
T ss_pred ---cccCcEEEEeCCCCCCCcccCHHHHHHHHH---------HHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccE
Confidence 346788888999999999999665555544 344599999999997631 1122111 11 224
Q ss_pred EEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
+++.|++|.+| .+| +|+++.+++.++.+...... ...+++.....++..+++.
T Consensus 229 i~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~------------------------~~~~~s~~~q~~~~~~l~~ 283 (386)
T PRK07550 229 VHLYSFSKSYA-LTGHRVGAVVASPARIAEIEKFMDT------------------------VAICAPRIGQIAVAWGLPN 283 (386)
T ss_pred EEEecchhhcc-CcccceEeeecCHHHHHHHHHHHhh------------------------cccCCCcHHHHHHHHHhcc
Confidence 77899999988 445 89999998887665543211 1112333344444445543
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hhC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SLS 424 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~~ 424 (508)
+.+ .++..++++.+.++++.+.|.+.. ++.+. +.+ +.++|++++... .+..++...| +++
T Consensus 284 ~~~-~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~-~~g--------~~~~~~~~~~~~---~~~~~l~~~l~~~~ 344 (386)
T PRK07550 284 LAD-WRAGNRAEIARRRDAFRAVFARLP------GWELL-ASG--------AYFAYVRHPFPD---RPSREVARRLAKEA 344 (386)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhCC------CceeC-CCc--------eEEEEecCCCCC---CCHHHHHHHHHHhc
Confidence 322 245667788888899999998752 45443 222 678888876411 2344577664 678
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
||.+.+|..+... ..+++||+++. .+.++++.+++.|.+|
T Consensus 345 gv~v~pg~~f~~~---------------------------------~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 345 GILCLPGTMFGPG---------------------------------QEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred CEEEeCchhhCCC---------------------------------CCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 9999998755321 25789999974 4689999999988776
No 149
>PRK09265 aminotransferase AlaT; Validated
Probab=99.92 E-value=2.4e-22 Score=210.27 Aligned_cols=343 Identities=9% Similarity=0.030 Sum_probs=216.4
Q ss_pred CCCeeeeCCCCC----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEE
Q 010538 39 NGTVYLDHAGAT----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIF 108 (508)
Q Consensus 39 ~~~iyld~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~ 108 (508)
++.+.|+.+... ++++.+++++.+... ... .|.. ......+|+.+|+++ +++++ +|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~-~~~-----~Y~~----~~G~~~lr~~ia~~~~~~~~~~~~~~--~i~~ 100 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLP-TAQ-----GYSD----SKGLFSARKAIMQYYQQKGIPDVDVD--DIYI 100 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhh-cCC-----CCCC----CCCcHHHHHHHHHHHhccCCCCCCcc--cEEE
Confidence 578899876432 256677777655332 111 1211 111346778888877 77888 8999
Q ss_pred cCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhc
Q 010538 109 TSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRK 188 (508)
Q Consensus 109 t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~ 188 (508)
|+|+++++.+++.++ .++|+.|+++...|+.+.... +..|.+++.++.+.+... ..|+++++
T Consensus 101 t~G~~~~l~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~v~~~~~~~~~~-------------~~d~~~l~- 162 (404)
T PRK09265 101 GNGVSELIVMAMQAL-LNNGDEVLVPAPDYPLWTAAV---SLSGGKPVHYLCDEEAGW-------------FPDLDDIR- 162 (404)
T ss_pred eCChHHHHHHHHHHh-CCCCCEEEEeCCCCcChHHHH---HHcCCEEEEEecccccCC-------------CCCHHHHH-
Confidence 999999999999988 688999999988887655444 445888888877543221 11678888
Q ss_pred CCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC
Q 010538 189 GASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY 264 (508)
Q Consensus 189 ~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~ 264 (508)
+++ .+++++|++++++||||.++|.+++.++++ +|+++|++||+|+++.. +....++...
T Consensus 163 -~~~------~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 226 (404)
T PRK09265 163 -SKI------TPRTKAIVIINPNNPTGAVYSKELLEEIVE---------IARQHNLIIFADEIYDKILYDGAVHISIASL 226 (404)
T ss_pred -Hhc------cccceEEEEECCCCCCCcCCCHHHHHHHHH---------HHHHCCCEEEEehhhhhccCCCCCcCCHHHc
Confidence 544 457899999999999999999555444443 33349999999999753 2111222221
Q ss_pred --C-CcEEEEeccccccCCCc--ceEEEEe--chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHH
Q 010538 265 --P-VDFVVMSFYKIFGYPTG--LGALIMR--NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIA 337 (508)
Q Consensus 265 --~-~D~~~~S~~K~~g~P~G--~G~l~~~--~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 337 (508)
+ .-+++.|++|.||.| | +||++++ +...+.+...+.. ... ...+.+.....
T Consensus 227 ~~~~~vi~~~S~SK~~~~p-GlRiG~~v~~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~~~~q~ 284 (404)
T PRK09265 227 APDLLCVTFNGLSKAYRVA-GFRVGWMVLSGPKKHAKGYIEGLDM--------------------LAS-MRLCANVPAQH 284 (404)
T ss_pred CCCceEEEEecchhhccCc-ccceEEEEEeCchHHHHHHHHHHHH--------------------Hhc-cccCCCcHHHH
Confidence 1 225678999999835 7 7999974 3222111110000 000 01123334444
Q ss_pred HHHHHHHHHHhcChHHH---HHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC-CCccC
Q 010538 338 SIRHGFNLINSLTVPAI---CRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD-GSWFG 413 (508)
Q Consensus 338 ~l~~al~~~~~~g~~~i---~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~ 413 (508)
++.+++..... .+.+ .+++.+.++++.+.|+++ +++++..|.+ +.++|++++... +..-+
T Consensus 285 ~~~~~l~~~~~--~~~~~~~~~~~~~~r~~~~~~L~~~------~~~~~~~p~~--------g~~l~~~~~~~~~~~~~~ 348 (404)
T PRK09265 285 AIQTALGGYQS--INELILPGGRLYEQRDRAWELLNAI------PGVSCVKPKG--------ALYAFPKLDPKVYPIHDD 348 (404)
T ss_pred HHHHHhcCchh--HHHHHHHHHHHHHHHHHHHHHHhcC------CCCcccCCCc--------ceEEEEEecccccCCCCH
Confidence 44445431111 1222 245667788888888876 3566655543 788888886421 00012
Q ss_pred HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHH
Q 010538 414 YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRC 493 (508)
Q Consensus 414 ~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~ 493 (508)
...+.+.+.++||.+.+|..|... ..+++|++++ .+.++++..++
T Consensus 349 ~~~~~~~l~~~gv~v~pg~~F~~~---------------------------------~~~~~Ri~~~--~~~e~l~~~l~ 393 (404)
T PRK09265 349 EQFVLDLLLQEKVLLVQGTGFNWP---------------------------------EPDHFRIVTL--PRVDDLEEAIG 393 (404)
T ss_pred HHHHHHHHHhCCEEEECchhhCCC---------------------------------CCCeEEEEeC--CCHHHHHHHHH
Confidence 234778889999999998755221 2578999996 68999999999
Q ss_pred hhhhhhh
Q 010538 494 SSFDFVN 500 (508)
Q Consensus 494 ~~~~~~~ 500 (508)
.|+++++
T Consensus 394 rl~~~l~ 400 (404)
T PRK09265 394 RIGRFLS 400 (404)
T ss_pred HHHHHHH
Confidence 9887764
No 150
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.92 E-value=2.2e-22 Score=206.19 Aligned_cols=319 Identities=13% Similarity=0.061 Sum_probs=228.2
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCceE-EEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCC-eE
Q 010538 79 SLATCDIVRAAREQVLDYFNASMKDYKC-IFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGA-AA 155 (508)
Q Consensus 79 ~~~~~~~~~~~r~~la~~~~~~~~~~~i-~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~-~v 155 (508)
+....+++.++++.+.++++.+.+ |++ ++++|+|.++..++.++..++|+.+++.- .+ + ..|. +.+++.|+ ++
T Consensus 34 s~~F~~i~~e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~F-G-~r~~~eia~~~g~~~v 109 (374)
T TIGR01365 34 SKLGKEKLAEAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SF-G-KGWVTDVTKQLKLPDV 109 (374)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HH-H-HHHHHHHHHhcCCCCc
Confidence 456789999999999999998533 455 56899999999999998435777777642 11 1 2455 78888898 47
Q ss_pred EEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccc
Q 010538 156 FAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILE 235 (508)
Q Consensus 156 ~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~ 235 (508)
..+..+....+ ++++++ . . +-|+++|..+.||..+|++++. +.
T Consensus 110 ~~l~~~~g~~~---------------~~~~ve--~--------~---~~v~~vhnETSTGv~npv~~i~---~~------ 152 (374)
T TIGR01365 110 RVLEAEYGKLP---------------DLKKVD--F--------K---NDVVFTWNGTTSGVRVPNGDFI---PA------ 152 (374)
T ss_pred EEEcCCCCCCC---------------CHHHcC--C--------C---CCEEEecCCCchheeccccccc---cc------
Confidence 87776543333 566676 1 1 1267999999999999997554 22
Q ss_pred cCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhh
Q 010538 236 ISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDF 315 (508)
Q Consensus 236 ~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 315 (508)
.++++++||++.++|..|+++.+ +|++++|.+|.+++|+|+++++++++++++....-..+.. ....++
T Consensus 153 -----~~~~lliVDavSs~g~~~l~~d~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~----~~~~~~ 221 (374)
T TIGR01365 153 -----DREGLTICDATSAAFAQDLDYHK--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPL----PKIFRL 221 (374)
T ss_pred -----cCCCcEEEEccchhcCCCCChhH--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCC----hhhhcc
Confidence 04789999999999999999995 9999999999999899999999999998775522100000 000000
Q ss_pred hhh---ccCccccccCCCCChhHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHhcccCCCCCce-EEEecC-CCC
Q 010538 316 VKR---RQGVEELFEDGTASFLSIASIRHGFNLINSL-TVPAICRHIASLGMYVRKVLLSLRHENGADV-CTIYGT-YTS 389 (508)
Q Consensus 316 ~~~---~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~-~~~~~~-~~~ 389 (508)
... ...........||++..++++..+++++.+. |++.+.+|+.++++.+++.++++ | +.++.. +..
T Consensus 222 ~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l-------g~l~~~~~~~~~ 294 (374)
T TIGR01365 222 TKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKN-------NWIHFLAETPEI 294 (374)
T ss_pred ccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCChhh
Confidence 000 0000123455678888888888888888775 89999999999999999999998 5 666653 221
Q ss_pred CcccCCCCceEEEEeeCCC------CCccC-HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCC
Q 010538 390 EVSYHDTGSMVSFNLKRPD------GSWFG-YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWD 462 (508)
Q Consensus 390 ~~~~~~~~~~v~~~~~~~~------~~~~~-~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 462 (508)
+...++++.++... ...++ ..++.+.|+++||.+.+|...
T Consensus 295 -----rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~---------------------------- 341 (374)
T TIGR01365 295 -----RSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYR---------------------------- 341 (374)
T ss_pred -----cCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccc----------------------------
Confidence 22455667764321 11122 256889999999999877421
Q ss_pred CccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 463 DNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 463 ~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
..+..+||+.....+.+|++.++..|.
T Consensus 342 -------~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 342 -------DAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred -------cCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 125789999999999999999988865
No 151
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=2e-23 Score=212.84 Aligned_cols=319 Identities=15% Similarity=0.064 Sum_probs=204.8
Q ss_pred CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeE
Q 010538 52 YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSY 131 (508)
Q Consensus 52 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~v 131 (508)
+++.+.+++.+... . . ..+. .....+++++.+++++| ++ ++++++|+|+|+.+++.++ .++|++|
T Consensus 10 ~~~~v~~a~~~~~~-~---~--~~~~----~~~~~~~l~~~~a~~~g--~~--~~~~~~~gt~a~~~~~~~l-~~~gd~v 74 (338)
T cd06502 10 PTPEMLEAMAAANV-G---D--DVYG----EDPTTAKLEARAAELFG--KE--AALFVPSGTAANQLALAAH-TQPGGSV 74 (338)
T ss_pred CCHHHHHHHHhccc-C---C--cccC----CCHHHHHHHHHHHHHhC--CC--eEEEecCchHHHHHHHHHh-cCCCCeE
Confidence 57778777654321 1 1 1111 13457888999999999 44 6888999999999999998 6889999
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCC-CCCCCceEEEEeCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERD-PAGDAYNLFAFPSE 210 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~-~~~~~t~lv~~~~~ 210 (508)
+++...|+++..........|++++.+|.+. ..+ |+++++ +++.+.. ...+++++|+++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~---------------d~~~l~--~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 75 ICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKL---------------TPEDLE--AAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred EEecCcceeeecCCcHHHHcCceEEeecCCC-CcC---------------CHHHHH--HHhhccCCCcCCcceEEEEEee
Confidence 9999999876432222233699999998754 334 678888 6664210 11247899999999
Q ss_pred CCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC-----CCCCCCCCCCcEEEEeccccccCCCcceE
Q 010538 211 CNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT-----QPPDLSKYPVDFVVMSFYKIFGYPTGLGA 285 (508)
Q Consensus 211 ~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~-----~~~d~~~~~~D~~~~S~~K~~g~P~G~G~ 285 (508)
+|+ |.+++.+++.++++ +|+++|+++++|++|..+. .++.....++|+++.|+||+|+.| |-++
T Consensus 137 ~n~-g~~~~~~~l~~i~~---------~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~-~g~~ 205 (338)
T cd06502 137 TEG-GTVYPLDELKAISA---------LAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAP-VGAV 205 (338)
T ss_pred cCC-ccccCHHHHHHHHH---------HHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCc-cceE
Confidence 996 76667655444443 2334899999999874221 122211236899999999999956 4245
Q ss_pred EEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 010538 286 LIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYV 365 (508)
Q Consensus 286 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l 365 (508)
++.++++++.+.+....+ .++.+...+ ...+++..+...+...+.+++.++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~-~~~a~~~~L~~~~~~~~~~~~~~~~~~l 260 (338)
T cd06502 206 VVGNRDFIARARRRRKQA------------------------GGGMRQSGF-LAAAGLAALENDLWLRRLRHDHEMARRL 260 (338)
T ss_pred EECCHHHHHHHHHHHHHh------------------------CCChhhHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 567888877765542111 111122222 1222333333334566778899999999
Q ss_pred HHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHh---hCCCeeccCCCCCchHHHhh
Q 010538 366 RKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLAS---LSGIQLRTGCFCNPGACAKY 442 (508)
Q Consensus 366 ~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~---~~gI~v~~g~~~~~~~~~~~ 442 (508)
.+.|+++ ++.+..+ .++++.+.++... .+ ...+.+.+. ++|+.++...
T Consensus 261 ~~~L~~~-------~~~~~~~---------~~~~~~v~~~~~~--~~-~~~l~~~l~~~~~~gi~~~~~~---------- 311 (338)
T cd06502 261 AEALEEL-------GGLESEV---------QTNIVLLDPVEAN--AV-FVELSKEAIERRGEGVLFYAWG---------- 311 (338)
T ss_pred HHHHHhc-------CCCcccc---------cCCeEEEecCCcc--HH-HHHHHHHHHHhhhCCEEEEecC----------
Confidence 9999887 3433322 1688888765321 11 112222222 5788876521
Q ss_pred cCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 443 LGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 443 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.+++|+++++++|.+|++++++++++
T Consensus 312 -----------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 312 -----------------------------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred -----------------------------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 36899999999999999999998754
No 152
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=1.4e-22 Score=206.27 Aligned_cols=319 Identities=13% Similarity=0.081 Sum_probs=215.0
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCc
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDY 104 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~ 104 (508)
+++.+-. +|-...++.++|..+-....++ ..+.....+ ..|+ ... ..++|+.+++++|.+++
T Consensus 4 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~y~----~~~-~~~lr~~la~~~~~~~~-- 65 (330)
T TIGR01140 4 NLRRAAA-RYGIPPEDWLDFSTGINPLGPP-VPPIPASAW---------ARYP----DPE-YDELRAAAAAYYGLPAA-- 65 (330)
T ss_pred cHHHHHH-HcCCChhheeEccccCCCCCCC-hhhcchHHH---------hhCC----Ccc-HHHHHHHHHHHhCCChh--
Confidence 5666655 5654446789999886554433 322221111 1111 112 37789999999999888
Q ss_pred eEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchh
Q 010538 105 KCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPI 184 (508)
Q Consensus 105 ~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~ 184 (508)
+|++|+|+++++.++..++ .+| .|++....|+ .+...++..|.+++.++ + ++
T Consensus 66 ~i~~t~G~~~~i~~~~~~l--~~g-~vl~~~p~y~---~~~~~~~~~g~~~~~~~-----d-----------------~~ 117 (330)
T TIGR01140 66 SVLPVNGAQEAIYLLPRLL--APG-RVLVLAPTYS---EYARAWRAAGHEVVELP-----D-----------------LD 117 (330)
T ss_pred hEEECCCHHHHHHHHHHHh--CCC-eEEEeCCCcH---HHHHHHHHcCCEEEEeC-----C-----------------HH
Confidence 8999999999999987775 456 5776654444 44455667899998887 1 45
Q ss_pred hhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCC--
Q 010538 185 QRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLS-- 262 (508)
Q Consensus 185 ~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~-- 262 (508)
.++ +.+ ++++++++++++||||.++|.+++.++++ +|+++|++||+|+++.......++.
T Consensus 118 ~l~--~~~-------~~~~~v~i~~p~NPtG~~~~~~~~~~l~~---------~a~~~~~~ii~De~y~~~~~~~~~~~~ 179 (330)
T TIGR01140 118 RLP--AAL-------EELDVLVLCNPNNPTGRLIPPETLLALAA---------RLRARGGWLVVDEAFIDFTPDASLAPQ 179 (330)
T ss_pred HHH--hhc-------ccCCEEEEeCCCCCCCCCCCHHHHHHHHH---------HhHhcCCEEEEECcccccCCccchhhH
Confidence 556 443 24578999999999999999888877776 4566999999999986432222222
Q ss_pred --CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHH
Q 010538 263 --KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIAS 338 (508)
Q Consensus 263 --~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~ 338 (508)
..+.++++.|++|++| ++| +|+++++++.++.+.+... ..+.+.....+
T Consensus 180 ~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~--------------------------~~~~s~~~q~~ 232 (330)
T TIGR01140 180 AARFPGLVVLRSLTKFFG-LAGLRLGFVVAHPALLARLREALG--------------------------PWTVNGPARAA 232 (330)
T ss_pred hccCCCEEEEEecchhhc-CchhhhhheeCCHHHHHHHHhcCC--------------------------CCCchHHHHHH
Confidence 1245699999999999 557 6999999988776664411 11223333333
Q ss_pred HHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHH
Q 010538 339 IRHGFNLINSLT-VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREV 417 (508)
Q Consensus 339 l~~al~~~~~~g-~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 417 (508)
+.+++.+.+ .+.+++++.++++++.+.|++.. .+++. +.. +.++|+.+++. .++
T Consensus 233 ---~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~-~~~--------~~f~~~~~~~~-------~~l 287 (330)
T TIGR01140 233 ---GRAALADTAWQAATRARLAAERARLAALLARLG------GLEVV-GGT--------ALFLLVRTPDA-------AAL 287 (330)
T ss_pred ---HHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCC------CceEC-CCC--------CeEEEEEcCCH-------HHH
Confidence 334433322 36778999999999999998872 35543 222 67888876531 247
Q ss_pred HHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 418 EKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 418 ~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
.+.|.++||.+.+|..+.. ...+++|++++. ..++ ++++.++
T Consensus 288 ~~~l~~~gi~v~pg~~f~~---------------------------------~~~~~iRi~~~~--~~~~-~~~~~~l 329 (330)
T TIGR01140 288 HEALARRGILIRDFDNFPG---------------------------------LDPRYLRFALPT--DEEN-DRLEEAL 329 (330)
T ss_pred HHHHHHCCEEEEECCCCCC---------------------------------CCCCEEEEEecC--HHHH-HHHHHhh
Confidence 8888889999999976521 125789999983 3344 8887765
No 153
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.92 E-value=4.9e-23 Score=217.33 Aligned_cols=295 Identities=13% Similarity=0.067 Sum_probs=202.8
Q ss_pred HHHHHHHHHHcCC---CCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc
Q 010538 87 RAAREQVLDYFNA---SMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 87 ~~~r~~la~~~~~---~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
...|+.++++++. +++ +|++|+|+++|+.+++.++ ..+|+.|++....|+.+ ...++..|++++.+|++++
T Consensus 124 ~~lr~~ia~~~~~~~~~~~--~Iiit~G~~~al~~~~~~l-~~pgd~Vlv~~P~y~~~---~~~~~~~g~~~~~v~~~~~ 197 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAF--EIDLTSGAIDAIERLLCAH-LLPGDSVAVEDPCFLSS---INMLRYAGFSASPVSVDAE 197 (431)
T ss_pred HHHHHHHHHHHhhccCCcC--eEEEecCcHHHHHHHHHHh-CCCCCEEEEeCCCcHHH---HHHHHHcCCeEEeeccCCC
Confidence 4467777777662 345 7999999999999999998 57899999888555544 4555567999999998654
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEe-CCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFP-SECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~-~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
+ + |++.++ +++ ++++++++++ +++||||.+++.+++.++++ +|+++
T Consensus 198 g-~---------------~~~~l~--~~~------~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~---------la~~~ 244 (431)
T PRK15481 198 G-M---------------QPEKLE--RAL------AQGARAVILTPRAHNPTGCSLSARRAAALRN---------LLARY 244 (431)
T ss_pred C-C---------------CHHHHH--HHH------hcCCCEEEECCCCCCCCCccCCHHHHHHHHH---------HHHhc
Confidence 3 4 577887 554 2356777775 99999999999984444443 33337
Q ss_pred -CeEEEEeccccCCC--CCCC-CC-CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhh
Q 010538 243 -RWMVLIDAAKGCVT--QPPD-LS-KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDF 315 (508)
Q Consensus 243 -g~~vivD~a~~~g~--~~~d-~~-~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 315 (508)
+++||+|++++.-. ...+ +. ..+..+++.|++|.|+ | | +||+++++++++.+......
T Consensus 245 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~-GlRiG~~i~~~~~~~~~~~~~~~------------- 309 (431)
T PRK15481 245 PQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-P-DLRLAFVASDSATSARLRLRLNS------------- 309 (431)
T ss_pred CCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-C-CceeEEEeCCHHHHHHHHHHHhc-------------
Confidence 99999999876311 0011 11 1134588999999999 8 6 89999998887766432110
Q ss_pred hhhccCccccccCCCCChhHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccC
Q 010538 316 VKRRQGVEELFEDGTASFLSIASIRHGFNLIN-SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYH 394 (508)
Q Consensus 316 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~ 394 (508)
.....+.....++..+++.-. ...++..++.+++.++++.+.|++. ++.+..|.+
T Consensus 310 -----------~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-------~~~~~~p~g------ 365 (431)
T PRK15481 310 -----------GTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-------GIAIPSPGD------ 365 (431)
T ss_pred -----------cccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCccccCCC------
Confidence 011223333444444443100 0115677888889999999999875 455544443
Q ss_pred CCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 395 DTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 395 ~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
++++|++++.. . ..+.+.|.++||.+.+|..|.... ..++
T Consensus 366 --g~f~~~~l~~~-~-----~~~~~~l~~~gV~v~pg~~f~~~~--------------------------------~~~~ 405 (431)
T PRK15481 366 --GLNLWLPLDTD-S-----QATALTLAKSGWLVREGEAFGVSA--------------------------------PSHG 405 (431)
T ss_pred --eEEEEEECCCC-H-----HHHHHHHHHCCcEEecCCccccCC--------------------------------CCCe
Confidence 78999988641 1 247778888999999997663211 1468
Q ss_pred EEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+|||++.. +.++++.+++.|++.++
T Consensus 406 iRis~~~~-~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 406 LRITLSTL-NDAEINRLAADLHQALN 430 (431)
T ss_pred EEEEcCCC-ChHHHHHHHHHHHHHhc
Confidence 99999964 58999999999987754
No 154
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=2.2e-22 Score=210.86 Aligned_cols=343 Identities=14% Similarity=0.064 Sum_probs=223.2
Q ss_pred CCCCCCCHHHHHHHHHHhhcccc-CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcC
Q 010538 47 AGATLYSELQMEAIFRDFTTNVY-GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFP 124 (508)
Q Consensus 47 ~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~ 124 (508)
++...++|.+++++...+...+. +.+++.+..|....+..++ +++.+++++|.+.. +++++|++.|+.+++.++
T Consensus 35 ~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~a---lv~~~SG~~A~~~~l~al- 110 (416)
T PRK13034 35 ASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYA---NVQPHSGSQANGAVYLAL- 110 (416)
T ss_pred ccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCce---EEecCCcHHHHHHHHHHh-
Confidence 55666799999888665433332 3344444444444444554 66699999999754 566788899999999999
Q ss_pred CCCCCeEEEecccccchHH-HHHHHHhcCCeE--EEEccCC-ccCccccccccccccccccchhhhhcCCCCCCCCCCCC
Q 010538 125 WSHQSSYMYTMENHNSVLG-IREYALSQGAAA--FAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGD 200 (508)
Q Consensus 125 ~~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v--~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~ 200 (508)
.++|++|++++..|.+... ..+. ...+..+ ..++.+. ...+ |+++++ +.+++ .
T Consensus 111 ~~~GD~Vl~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~---------------d~~~le--~~l~~-----~ 167 (416)
T PRK13034 111 LKPGDTILGMSLSHGGHLTHGAKV-SLSGKWYNAVQYGVDRLTGLI---------------DYDEVE--ELAKE-----H 167 (416)
T ss_pred cCCCCEEEEcCccceeeeecCCcc-eeccceeeeEEcccccccCCc---------------CHHHHH--HHHhh-----c
Confidence 7899999999998877321 1110 0012222 2333332 1223 577777 55431 2
Q ss_pred CceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCC---CCCcEEEEeccccc
Q 010538 201 AYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSK---YPVDFVVMSFYKIF 277 (508)
Q Consensus 201 ~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~---~~~D~~~~S~~K~~ 277 (508)
++++|++.+ ..+|...|+++|.++|++ +|+++++|++|++|........ .++|++++|+||++
T Consensus 168 ~~klVi~~~--~~~g~~~dl~~l~~la~~------------~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 168 KPKLIIAGF--SAYPRELDFARFREIADE------------VGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CCeEEEECC--CccccccCHHHHHHHHHH------------cCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 468887654 346899999999999998 9999999999998776443311 25899999999999
Q ss_pred cCCCcceEEEEechhH-hhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHH
Q 010538 278 GYPTGLGALIMRNDAA-KLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICR 356 (508)
Q Consensus 278 g~P~G~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~ 356 (508)
++|.| |+++.+++.+ +.+++..+.+. .+++.++.++++..++..+.+.+..++++
T Consensus 234 ~g~~G-G~v~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 234 RGPRG-GMILTNDEEIAKKINSAVFPGL-----------------------QGGPLMHVIAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred CCCCC-eEEEECcHHHHHHHHhhcCCcc-----------------------cCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 66887 7777765543 33343322110 12233444555554555443334567789
Q ss_pred HHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCc
Q 010538 357 HIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNP 436 (508)
Q Consensus 357 ~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~ 436 (508)
++.+++++|++.|.++ |+++..+... ++++.+.+.+.. .....+.+.|.++||.+..-.....
T Consensus 290 ~l~~~a~~l~~~L~~~-------G~~~~~~~~~-------t~i~~v~~~~~~---~~~~~~~~~L~~~GI~v~~~~~p~~ 352 (416)
T PRK13034 290 QVIANAQALAEVLKER-------GYDLVSGGTD-------NHLLLVDLRPKG---LSGKDAEQALERAGITVNKNTVPGD 352 (416)
T ss_pred HHHHHHHHHHHHHHHc-------CCEeccCCCC-------CcEEEEEcCCCC---CCHHHHHHHHHhCCcEEeccCCCCC
Confidence 9999999999999887 6777653222 688887775432 2334567889999999875211100
Q ss_pred hHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC----CCCHHHHHHHHHhhhhhhh
Q 010538 437 GACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY----MSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 437 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~t~eev~~l~~~~~~~~~ 500 (508)
+. ....+..+|+|++. .+|++|++++++++.+.+.
T Consensus 353 -----------------~~------------~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 353 -----------------TE------------SPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred -----------------Cc------------CCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 00 00014679999998 5569999999999998765
No 155
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-22 Score=211.80 Aligned_cols=339 Identities=11% Similarity=0.002 Sum_probs=218.6
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C---CCCCCceEEEcC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N---ASMKDYKCIFTS 110 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~---~~~~~~~i~~t~ 110 (508)
.+.+.|+.+..... ++.+.+++.+..... ....|+. . ....+|+.+|+++ | +++++ +|++|+
T Consensus 44 ~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~----~~~~Y~~-~----G~~~lr~aia~~~~~~~g~~~~~~~~-~I~it~ 113 (410)
T PRK06290 44 MELIDMGVGEPDEMADESVVEVLCEEAKKP----ENRGYAD-N----GIQEFKEAAARYMEKVFGVKDIDPVT-EVIHSI 113 (410)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCC----CCCCCCC-C----CcHHHHHHHHHHHHHHcCCCcCCCcc-eEEEcc
Confidence 35788887765543 444444443322110 0111221 1 1344556666554 5 44531 699999
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCC
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
|+++++.+++.++ ..+|+.|+++...|+.+... ++..|++++.+|++.++.. .+|++.++ +
T Consensus 114 Gs~~al~~~~~~~-~~~gd~Vlv~~P~y~~~~~~---~~~~g~~v~~v~~~~~~~~-------------~~d~~~l~--~ 174 (410)
T PRK06290 114 GSKPALAMLPSCF-INPGDVTLMTVPGYPVTGTH---TKYYGGEVYNLPLLEENNF-------------LPDLDSIP--K 174 (410)
T ss_pred CHHHHHHHHHHHh-CCCCCEEEEeCCCCccHHHH---HHHcCCEEEEEecCCCcCC-------------cCCHHHHH--H
Confidence 9999999999998 68899999998777665544 4456999999999754332 12577777 4
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCCCCC----
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPDLSK---- 263 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d~~~---- 263 (508)
.+ .+++++|++++++||||.+++.+++.++++ +|+++|++||+|+++.... .+..+..
T Consensus 175 ~~------~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~---------la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~ 239 (410)
T PRK06290 175 DI------KEKAKLLYLNYPNNPTGAVATKEFYEEVVD---------FAKENNIIVVQDAAYAALTFDGKPLSFLSVPGA 239 (410)
T ss_pred hh------cccceEEEEECCCCCCCcCCCHHHHHHHHH---------HHHHcCeEEEEecchhhceeCCCCcChhcCCCc
Confidence 44 347899999999999999999877777765 4556999999999987421 2223211
Q ss_pred CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 264 YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 264 ~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
.+.++++.|++|.+| .+| +||+++++++++.+...... ...++. .+...++..
T Consensus 240 ~~~~I~i~SfSK~~g-~~GlRiG~ii~~~~l~~~l~~~~~~-----------------------~~~~~~-~~~q~aa~~ 294 (410)
T PRK06290 240 KEVGVEIHSLSKAYN-MTGWRLAFVVGNELIVKAFATVKDN-----------------------NDSGQF-IAIQKAGIY 294 (410)
T ss_pred cccEEEEeechhhcC-CchhheEeEEeCHHHHHHHHHHHhc-----------------------cccCCc-HHHHHHHHH
Confidence 245699999999998 447 89999998887665533110 111221 222233333
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc---cCHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW---FGYREVE 418 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~l~ 418 (508)
+++. ...++.+++++.+.++++.+.|++. ++.+..+.+ +.++|+++++..... .+..++.
T Consensus 295 ~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~p~g--------~f~l~v~lp~~~~~~~~~~~~~~~~ 357 (410)
T PRK06290 295 ALDH--PEITEKIREKYSRRLDKLVKILNEV-------GFKAEMPGG--------TFYLYVKAPKGTKSGIKFENAEEFS 357 (410)
T ss_pred HhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-------CCeecCCCe--------eeEEEEECCCccccCCCCCCHHHHH
Confidence 3332 1125677888889999999999886 566665543 567777876421000 1334577
Q ss_pred HHHhhCCC-eeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCC-CCHHHHHHHHHhhh
Q 010538 419 KLASLSGI-QLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYM-STFEDAKVNRCSSF 496 (508)
Q Consensus 419 ~~L~~~gI-~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-~t~eev~~l~~~~~ 496 (508)
+.|.++|+ .+.+|.. .++++||+++.. .++|+.+++++++.
T Consensus 358 ~~Ll~~~~v~~~p~~~-------------------------------------~~~~lRi~~~~~~~~~~~~~~~~~~l~ 400 (410)
T PRK06290 358 QYLIKEKLISTVPWDD-------------------------------------AGHFLRFSVTFEAKDEEEEDRILEEIK 400 (410)
T ss_pred HHHHHhCCEEEECCcc-------------------------------------ccCeEEEEEEcccccccchhHHHHHHH
Confidence 77776654 4445431 146899999844 68899999999988
Q ss_pred hhhh
Q 010538 497 DFVN 500 (508)
Q Consensus 497 ~~~~ 500 (508)
+.+-
T Consensus 401 ~~~~ 404 (410)
T PRK06290 401 RRLS 404 (410)
T ss_pred HHHh
Confidence 7653
No 156
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.1e-22 Score=205.45 Aligned_cols=307 Identities=16% Similarity=0.179 Sum_probs=211.3
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC---CCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN---ASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~---~~~~~~~i~~t~g~t~ 114 (508)
.+.+.|+.+-...+ |+.+++++.+..... ....|+.. ...++|++++++++ ++++ +|++|+|+++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~----~~~~Y~~~-----~~~~Lr~aia~~~~~~~~~~~--~i~it~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSD----TLRIYYDS-----PDEELIEKILSYLDTDFLSKN--NVSVGNGADE 87 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhh----hhhcCCCC-----ChHHHHHHHHHHhCCCCCCcc--eEEEcCCHHH
Confidence 46788887765443 555666665533211 11112111 25678899999998 7888 8999999999
Q ss_pred HHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 115 ALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 115 al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
++.+++.++ +.|++.. |++......++..|++++.+|.+.++.++ ...+
T Consensus 88 ~i~~~~~~~-----d~v~v~~---P~y~~~~~~~~~~g~~~~~v~~~~~~~~~---------------~~~~-------- 136 (335)
T PRK14808 88 IIYVMMLMF-----DRSVFFP---PTYSCYRIFAKAVGAKFLEVPLTKDLRIP---------------EVNV-------- 136 (335)
T ss_pred HHHHHHHHh-----CcEEECC---CCHHHHHHHHHHcCCeEEEecCCCcCCCC---------------hhHc--------
Confidence 999999987 4577766 45445555566679999999987654331 1111
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC--CCCCC-CCCCCCcEEEE
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV--TQPPD-LSKYPVDFVVM 271 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g--~~~~d-~~~~~~D~~~~ 271 (508)
.+++++++++++||||.+++.+++.++++ ++++||+|+++..- ....+ +...+.-+++.
T Consensus 137 -----~~~~~i~i~nP~NPTG~~~s~~~l~~l~~-------------~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~ 198 (335)
T PRK14808 137 -----GEGDVVFIPNPNNPTGHVFEREEIERILK-------------TGAFVALDEAYYEFHGESYVDLLKKYENLAVIR 198 (335)
T ss_pred -----cCCCEEEEeCCCCCCCCCcCHHHHHHHHh-------------cCCEEEEECchhhhcCCchHHHHHhCCCEEEEE
Confidence 24589999999999999999999999986 69999999998631 11111 11223358889
Q ss_pred eccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc
Q 010538 272 SFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL 349 (508)
Q Consensus 272 S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 349 (508)
|++|.|| .+| +||+++++++++.+...... .+.+.....++.++++...
T Consensus 199 S~SK~~~-l~GlRvG~~v~~~~~~~~l~~~~~~--------------------------~~~~~~~q~a~~~~l~~~~-- 249 (335)
T PRK14808 199 TFSKAFS-LAAQRIGYVVSSEKFIDAYNRVRLP--------------------------FNVSYVSQMFAKVALDHRE-- 249 (335)
T ss_pred echhhcc-CcccceEEEEeCHHHHHHHHHhcCC--------------------------CCCCHHHHHHHHHHHhCHH--
Confidence 9999999 557 89999999887766543110 1123333444455554321
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeec
Q 010538 350 TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLR 429 (508)
Q Consensus 350 g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 429 (508)
.+.+..+++.+.++++.+.|+++ ++++..+. ++++++.+++.+ ...+.+.|.++||.|+
T Consensus 250 ~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~---------g~f~~~~l~~~~-----~~~~~~~l~~~Gi~V~ 308 (335)
T PRK14808 250 IFEERTKFIVEERERMKSALREM-------GYRITDSR---------GNFVFIFMEKEE-----KERLLEHLRAKNIAVR 308 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-------CCEECCCC---------CeEEEEeCCCcc-----HHHHHHHHHHCCeEEE
Confidence 13555566677788888888876 56665442 788899887432 2358889999999998
Q ss_pred cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 430 TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 430 ~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
. | ..++|||++ +.++.++++++|+.|
T Consensus 309 ~---~-------------------------------------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 309 S---F-------------------------------------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred E---C-------------------------------------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 4 1 246999999 889999999998765
No 157
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.91 E-value=1.5e-22 Score=206.22 Aligned_cols=323 Identities=16% Similarity=0.120 Sum_probs=237.7
Q ss_pred CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEE
Q 010538 53 SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYM 132 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl 132 (508)
+|.+++++.+.+.....+-..+... ....+...++++.+|+++|.+.. ++|++|.. |+..++.++ .++++.|+
T Consensus 55 ~~~~~~a~~~~~~~~g~g~~gsR~i--~G~~~~h~~LE~~lA~f~g~e~a---l~f~SGy~-AN~~~i~~l-~~~~dli~ 127 (388)
T COG0156 55 HPELIEAAKAAIRRYGVGAGGSRLI--SGTSDLHVELEEELADFLGAEAA---LLFSSGFV-ANLGLLSAL-LKKGDLIF 127 (388)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcc--cCCcHHHHHHHHHHHHHhCCCcE---EEEcccch-hHHHHHHHh-cCCCcEEE
Confidence 6777777766553322233333322 33577889999999999999876 99999988 788888888 57799999
Q ss_pred EecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCC
Q 010538 133 YTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECN 212 (508)
Q Consensus 133 ~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n 212 (508)
..+..|.|++...+. .+++++....+ |++.++ +.|++......+.++|++..+.+
T Consensus 128 ~D~lnHASiidG~rl---s~a~~~~f~Hn--------------------D~~~Le--~~l~~~~~~~~~~~~IvtegVfS 182 (388)
T COG0156 128 SDELNHASIIDGIRL---SRAEVRRFKHN--------------------DLDHLE--ALLEEARENGARRKLIVTEGVFS 182 (388)
T ss_pred EechhhhhHHHHHHh---CCCcEEEecCC--------------------CHHHHH--HHHHhhhccCCCceEEEEecccc
Confidence 999999998777664 47787777653 345555 55533111111569999999999
Q ss_pred CCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC---------CCCCCCcEEEEeccccccCCCcc
Q 010538 213 FSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD---------LSKYPVDFVVMSFYKIFGYPTGL 283 (508)
Q Consensus 213 ~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d---------~~~~~~D~~~~S~~K~~g~P~G~ 283 (508)
+.|.+.|+++|.+++++ ++++++||.+|+.|..-.. +..-.+|++++|++|.|| -.|
T Consensus 183 MdGdiApL~~l~~L~~k------------y~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~G- 248 (388)
T COG0156 183 MDGDIAPLPELVELAEK------------YGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSG- 248 (388)
T ss_pred CCCCcCCHHHHHHHHHH------------hCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccC-
Confidence 99999999999999998 9999999999998766532 222346899999999999 545
Q ss_pred eEEEEechhHhhhccccccCceEEecccchhhhhhccCcccccc-CCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 010538 284 GALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE-DGTASFLSIASIRHGFNLINSLTVPAICRHIASLG 362 (508)
Q Consensus 284 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 362 (508)
|++..+..+++.+... .+.+. +.+.++...++...+++.+.+ ..+.++++.++.
T Consensus 249 g~v~g~~~~~d~L~~~-----------------------ar~~ifStalpP~~aaa~~~al~~l~~--~~~~r~~L~~~~ 303 (388)
T COG0156 249 GYIAGSAALIDYLRNR-----------------------ARPFIFSTALPPAVAAAALAALRILEE--GPERRERLQELA 303 (388)
T ss_pred ceeeCcHHHHHHHHHh-----------------------CCceeccCCCCHHHHHHHHHHHHHHHh--CHHHHHHHHHHH
Confidence 7888888887766543 11111 233455566677889998876 478889999999
Q ss_pred HHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhh
Q 010538 363 MYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKY 442 (508)
Q Consensus 363 ~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~ 442 (508)
.++++.++.. ++.+ .+.. ++|+.+.+.+... ...+...|.++||.+.+....+.+.+
T Consensus 304 ~~~~~~~~~~-------~~~~-~~s~--------s~I~pv~~gd~~~----a~~~s~~l~~~Gi~v~~i~~PTVp~g--- 360 (388)
T COG0156 304 AFFRSLLKAL-------GLVL-LPSE--------SPIIPVILGDEER----ALEASRALLEEGIYVSAIRPPTVPKG--- 360 (388)
T ss_pred HHHHHHHHhc-------CCcc-CCCC--------CCeeeeEeCCHHH----HHHHHHHHHHCCeeEeeecCCCCCCC---
Confidence 9999777664 3433 2322 7899888876322 23466777777999999877766642
Q ss_pred cCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 443 LGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 443 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
...+|++++..+|++||+++++++.+.
T Consensus 361 -----------------------------tarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 361 -----------------------------TARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----------------------------cceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 578999999999999999999998764
No 158
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.91 E-value=4e-22 Score=205.42 Aligned_cols=326 Identities=13% Similarity=0.042 Sum_probs=214.9
Q ss_pred CCCeeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
.+.+.|+.+... .+++.+++++.+.. .... .|.. .. ...+|+.+|++++++++ +|++|+|+++++.
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~-~~~~-----~Y~~----~~-~~~Lr~aia~~~~v~~~--~I~it~G~~~~i~ 88 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSAL-SALR-----HYPD----PD-YRELRLALAQHHQLPPE--WILPGNGAAELLT 88 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHH-HHhh-----cCCC----cC-HHHHHHHHHHHhCcChh--hEEECCCHHHHHH
Confidence 457888876443 34566666654322 2111 1211 11 35788999999999998 8999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++.++ . +|+.|++....|+ .....++..|++++.+|.+.++..... ..++++++ +.
T Consensus 89 ~~~~~l-~-~g~~vlv~~P~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~~----------~~~~~~~~--~~------ 145 (360)
T PRK07392 89 WAGREL-A-QLRAVYLITPAFG---DYRRALRAFGATVKELPLPLDQPSPGL----------TLRLQTLP--PQ------ 145 (360)
T ss_pred HHHHHh-C-CCCeEEEECCCcH---HHHHHHHHcCCeEEEEecccccCCccc----------ccCHHHHH--Hh------
Confidence 999987 3 4678887775444 445556667999999998754332000 01345554 21
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---CCCC----CCCCCCcEEE
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---QPPD----LSKYPVDFVV 270 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~~~d----~~~~~~D~~~ 270 (508)
.++++++++++++||||.+++.++|.+++++ +++ +|+|+++..-. .+.+ +...+--+++
T Consensus 146 -~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~------------~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i 211 (360)
T PRK07392 146 -LTPNDGLLLNNPHNPTGKLWSREAILPLLEQ------------FAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIIL 211 (360)
T ss_pred -ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHH------------CCE-EEEECchhhhccCccccchHHHhhcCCCEEEE
Confidence 2467999999999999999999999999987 775 66699876311 1111 1111234888
Q ss_pred EeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 271 MSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 271 ~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
.|++|.|| .+| +||++++++.++.+.... ...+.+.....++.++++- ..
T Consensus 212 ~S~SK~~~-l~GlRiG~~v~~~~~~~~~~~~~--------------------------~~~~~s~~~q~~~~~~l~~-~~ 263 (360)
T PRK07392 212 RSLTKFYS-LPGLRLGYAIAHPDRLQRWQQWR--------------------------DPWPVNGLAAAAAIAALAD-RD 263 (360)
T ss_pred Eechhhhc-CCchheeeeeCCHHHHHHHHhhC--------------------------CCCCCCHHHHHHHHHHhcc-HH
Confidence 99999998 447 899999988876654321 1123344444444445432 11
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH-HhhCCCe
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL-ASLSGIQ 427 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-L~~~gI~ 427 (508)
-.+...+++++.++++.+.|+++ +++.+.. .. +++++++++. + ..++... ++++||.
T Consensus 264 -~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~-~~--------~~fl~~~~~~-~-----~~~l~~~ll~~~gv~ 321 (360)
T PRK07392 264 -FQQQTWAWLPPAREALFQGLASL------PGLTPLP-SA--------ANFLLVQSQG-S-----ALQLQEKLLQQHRIL 321 (360)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhC------CCcEECC-CC--------CCEEEEEcCC-C-----HHHHHHHHHhhCCEE
Confidence 13445567788888999999876 3666543 22 6788877653 1 2235555 5778999
Q ss_pred eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 428 LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 428 v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+++|..+... .++++||+++ +.++.+++.+.+.+++.
T Consensus 322 v~pg~~f~~~---------------------------------~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 322 IRDCLSFPEL---------------------------------GDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred EEeCCCCCCC---------------------------------CCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 9998755221 2579999999 67777888888877654
No 159
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=6.3e-22 Score=194.83 Aligned_cols=330 Identities=12% Similarity=0.068 Sum_probs=240.7
Q ss_pred CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHHHHHHHhhcCCCCCC
Q 010538 52 YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAALKLVGEAFPWSHQS 129 (508)
Q Consensus 52 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~al~~~~~~l~~~~g~ 129 (508)
.+|.+++++.+......++.|. ...++.+++..+.++-.+. +++ .|+|++|.--++.++++++ .++||
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~~-------~~~~~~~ai~~w~~~r~~~~i~~e--~i~~~p~VVpgi~~~I~~~-T~~gd 108 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYPY-------GSDELYAAIAHWFKQRHQWEIKPE--WIVFVPGVVPGISLAIRAL-TKPGD 108 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCCC-------CCHHHHHHHHHHHHHhcCCCCCcc--eEEEcCcchHhHHHHHHHh-CcCCC
Confidence 3677888876655433444442 2456788999999998876 455 8999999999999999999 68888
Q ss_pred eEEEecccccchHHHHHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEe
Q 010538 130 SYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFP 208 (508)
Q Consensus 130 ~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~ 208 (508)
.|++... .|.+..+..+..|-++...|+-. ++.. .-|.++++ +++. .+++++++++
T Consensus 109 ~Vvi~tP---vY~PF~~~i~~n~R~~i~~pL~~~~~~y-------------~iD~~~LE--~~~~-----~~~vkl~iLC 165 (388)
T COG1168 109 GVVIQTP---VYPPFYNAIKLNGRKVIENPLVEDDGRY-------------EIDFDALE--KAFV-----DERVKLFILC 165 (388)
T ss_pred eeEecCC---CchHHHHHHhhcCcEEEeccccccCCcE-------------EecHHHHH--HHHh-----cCCccEEEEe
Confidence 8887764 44455566666799999999863 3322 12788998 6664 4568999999
Q ss_pred CCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCCC-----CCcEEEEeccccccC
Q 010538 209 SECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSKY-----PVDFVVMSFYKIFGY 279 (508)
Q Consensus 209 ~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~~-----~~D~~~~S~~K~~g~ 279 (508)
++|||||.+...++|.+++. +|.+||+.||.|..|+. |...+.+... +.-+.+.|.+|+|+
T Consensus 166 nPHNP~Grvwt~eeL~~i~e---------lc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFN- 235 (388)
T COG1168 166 NPHNPTGRVWTKEELRKIAE---------LCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFN- 235 (388)
T ss_pred CCCCCCCccccHHHHHHHHH---------HHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeecccccc-
Confidence 99999999999999888887 78889999999999974 4344433322 33478889999999
Q ss_pred CCc--ceEEEEechhH-hhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHH
Q 010538 280 PTG--LGALIMRNDAA-KLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICR 356 (508)
Q Consensus 280 P~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~ 356 (508)
-+| ++.+++.++.. .+....+ .+.-.+.+|..++.+..+|.+.-..+ ++++.+
T Consensus 236 laGL~~a~~Ii~n~~lr~~~~~~l-----------------------~~~~~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~ 291 (388)
T COG1168 236 LAGLKCAYIIISNRELRAKFLKRL-----------------------KRNGLHGPSALGIIATEAAYNQGEPW-LDELLE 291 (388)
T ss_pred chhhhheeEEecCHHHHHHHHHHH-----------------------HHhcCCCCchHHHHHHHHHHHhchHH-HHHHHH
Confidence 557 78888876653 2222211 11223567888888888888865544 789999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH-HhhCCCeeccCCCCC
Q 010538 357 HIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL-ASLSGIQLRTGCFCN 435 (508)
Q Consensus 357 ~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-L~~~gI~v~~g~~~~ 435 (508)
++..+++++.+.+.+.- |++++..|++ ...+|+++.... ++...+.+. +++.+|.+..|..+.
T Consensus 292 yl~~N~~~~~~~l~~~~-----P~v~v~~p~g--------TYL~WLD~r~l~---l~d~~l~~~ll~~akVal~~G~~FG 355 (388)
T COG1168 292 YLKDNRDYVADFLNKHL-----PGVKVTEPQG--------TYLAWLDCRELG---LDDSELAEFLLEEAKVALSPGSTFG 355 (388)
T ss_pred HHHHHHHHHHHHHHhhC-----CCcEEecCCC--------ceeeeeeccccC---CChHHHHHHHHHhhcEeccCCCccC
Confidence 99999999999997763 6899998876 688898887542 221235544 467899999998654
Q ss_pred chHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 436 PGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 436 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
. ...|.+|+++.- +.+-+++.++.|+.-+
T Consensus 356 ~---------------------------------~g~gf~RlN~ac--pr~~L~eal~ri~~al 384 (388)
T COG1168 356 E---------------------------------EGSGFVRLNFAC--PRAILEEALERLKRAL 384 (388)
T ss_pred c---------------------------------CCCceEEEecCC--CHHHHHHHHHHHHHHH
Confidence 4 236899999984 6667777776666443
No 160
>PRK08175 aminotransferase; Validated
Probab=99.91 E-value=3.1e-22 Score=208.85 Aligned_cols=346 Identities=12% Similarity=0.032 Sum_probs=216.5
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~a 115 (508)
++.+.|+.+.... +++...+++.+.... .....|.......++.+++.+.+.+.+|. ++++ +|++|+|++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~~~ 103 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQR----PDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPES-EAIVTIGSKEG 103 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHH
Confidence 4566776654332 344455555443321 11112222111223333333334333343 4431 59999999999
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+.+++.++ ..+|++|+++...|+.+..... ..|+++..+|.+.++.. .++++ +.+++
T Consensus 104 l~~~~~~~-~~~gd~Vlv~~P~y~~~~~~~~---~~g~~~~~v~~~~~~~~----------------~~~l~--~~l~~- 160 (395)
T PRK08175 104 LAHLMLAT-LDHGDTVLVPNPSYPIHIYGAV---IAGAQVRSVPLVEGVDF----------------FNELE--RAIRE- 160 (395)
T ss_pred HHHHHHHh-CCCCCEEEEcCCCCcchHHHHH---HcCCeEEEEecccCCCc----------------HHHHH--HHHhh-
Confidence 99999888 6889999999988887655543 35899999998754332 44555 44321
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCCC----CCCc
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLSK----YPVD 267 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~~----~~~D 267 (508)
..++++++++++++||||.++|.+++.++++ +|+++|+++|+|++++. +..+..+.. .+..
T Consensus 161 --~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~---------~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~ 229 (395)
T PRK08175 161 --SYPKPKMMILGFPSNPTAQCVELEFFEKVVA---------LAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVA 229 (395)
T ss_pred --ccCCceEEEEeCCCCCCCCCCCHHHHHHHHH---------HHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCE
Confidence 2357899999999999999999976666555 44559999999999853 222222221 1344
Q ss_pred EEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
+++.|++|.||.| | +||++.++++++.+..... ....++. .+...++..+++.
T Consensus 230 i~~~S~SK~~g~p-GlRiG~~~~~~~l~~~~~~~~~-----------------------~~~~~~~-~~~q~~~~~~l~~ 284 (395)
T PRK08175 230 VEFFTLSKSYNMA-GWRIGFMVGNPELVSALARIKS-----------------------YHDYGTF-TPLQVAAIAALEG 284 (395)
T ss_pred EEEeeccccccCc-chhheeeeCCHHHHHHHHHHHh-----------------------hcccCCC-cHHHHHHHHHHhC
Confidence 7789999999845 6 8999999888776553310 0011222 2223333334432
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH-HhhC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL-ASLS 424 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-L~~~ 424 (508)
. +..++.+++++++.++++.+.|+.. ++.+..+.+ ++++++++++.... .+..++... ++++
T Consensus 285 ~-~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~p~~--------g~~i~i~l~~~~~~-~~~~~~~~~l~~~~ 347 (395)
T PRK08175 285 D-QQCVRDIAEQYKRRRDVLVKGLHEA-------GWMVEMPKA--------SMYVWAKIPEPYAA-MGSLEFAKKLLNEA 347 (395)
T ss_pred c-HHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCE--------EEEEEEECCcccCC-CCHHHHHHHHHHhC
Confidence 1 1235677788888899999999876 455544433 78999998753110 123456654 5678
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
||.|.+|..+... .++++|+++. .+.+++...++.|.++++
T Consensus 348 gv~v~p~~~f~~~---------------------------------~~~~lRis~~--~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 348 KVCVSPGIGFGDY---------------------------------GDTHVRFALI--ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred CEEEeCchhhCcC---------------------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 9999998754221 2578999997 477888888888777664
No 161
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=4.8e-22 Score=205.91 Aligned_cols=328 Identities=11% Similarity=0.081 Sum_probs=212.9
Q ss_pred CCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC--------CCCCCceEEEcC
Q 010538 40 GTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN--------ASMKDYKCIFTS 110 (508)
Q Consensus 40 ~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--------~~~~~~~i~~t~ 110 (508)
..+.|+.+-... +++.+++++.+.. ... .....|+. .....+|+++|++++ ++++ +|++|+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~Y~~-----~G~~~Lr~aia~~~~~~~~~~~~v~~~--~I~it~ 98 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLY-QQG--IESNRYPD-----GGHEALKQAIAEYVNESAAGSSQITPA--NISVGN 98 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHH-hhc--ccccCCCC-----CchHHHHHHHHHHhCccccccCCCCHH--HEEEcC
Confidence 467788776654 4566666654432 210 00111211 124667888888887 7777 899999
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCccccccccccccccccchhhhhcC
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
|+++++..++.++...+++.|++....|+ .....++..|++++.++.+.+ ..+ |+++++
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~---~~~~~~~~~g~~~~~~~~~~~~~~~---------------d~~~l~-- 158 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFS---MYGILAQTLGIPVVRVGRDPETFEI---------------DLAAAQ-- 158 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChH---HHHHHHHHcCCEEEEecCCcccCCC---------------CHHHHH--
Confidence 99999988777763333347887775544 444555667999999998642 233 677887
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC--CC-CCCCCCCC
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT--QP-PDLSKYPV 266 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~--~~-~d~~~~~~ 266 (508)
+++++ ...+++++|++++++||||.+++.+++.++++ ++ ++++||+|+++..-. .. ..+...+-
T Consensus 159 ~~~~~--~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~---------~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 225 (374)
T PRK02610 159 SAIEQ--TQNPPVRVVFVVHPNSPTGNPLTAAELEWLRS---------LP--EDILVVIDEAYFEFSQTTLVGELAQHPN 225 (374)
T ss_pred HHHHh--hcCCCceEEEEeCCCCCCCCCCCHHHHHHHHh---------cc--CCcEEEEeccccccCccchHHHHhcCCC
Confidence 55421 01257899999999999999999999998876 33 489999999986321 11 11222122
Q ss_pred cEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN 344 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~ 344 (508)
-+++.|++|.|| .+| +||+++++++++.+...... .+.+.....++..+++
T Consensus 226 ~ivi~SfSK~~g-~~GlRiG~~v~~~~l~~~l~~~~~~--------------------------~~~~~~~q~a~~~~l~ 278 (374)
T PRK02610 226 WVILRTFSKAFR-LAAHRVGYAIGHPELIAVLEKVRLP--------------------------YNLPSFSQLAAQLALE 278 (374)
T ss_pred EEEEEecchhcc-CcccceeeeecCHHHHHHHHHhcCC--------------------------CCCCHHHHHHHHHHhc
Confidence 377899999998 447 89999988887766543111 1122333334444544
Q ss_pred HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhC
Q 010538 345 LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLS 424 (508)
Q Consensus 345 ~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~ 424 (508)
.... ..+.+. ++.+.++.+.+.|+++ +++.+. |+. +++++++++.. .+..++.+.|.++
T Consensus 279 ~~~~-~~~~~~-~~~~~r~~l~~~L~~~------~~~~~~-p~~--------g~f~~~~l~~~----~~~~~~~~~l~~~ 337 (374)
T PRK02610 279 HRQE-LLAAIP-EILQERDRLYQALQEL------PQLRVW-PSA--------ANFLYLRLSQD----AALAALHQALKAQ 337 (374)
T ss_pred CHHH-HHHHHH-HHHHHHHHHHHHHHhC------CCcEeC-CCc--------ceEEEEeCCCC----CCHHHHHHHHHHC
Confidence 3222 123333 3344467788888776 356543 433 78899888642 2334688889999
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
||.++.+ .+++|||++ +.++++++++.|+++++-
T Consensus 338 gi~v~~~----------------------------------------~~~lRls~~---~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 338 GTLVRHT----------------------------------------GGGLRITIG---TPEENQRTLERLQAALTQ 371 (374)
T ss_pred CEEEEeC----------------------------------------CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 9998642 467999998 568889999998877653
No 162
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.91 E-value=2.2e-22 Score=210.39 Aligned_cols=339 Identities=12% Similarity=0.058 Sum_probs=208.3
Q ss_pred CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCC-CCCccchhhhhhHHHHHHHHHHHHHc---CCCCCCceEEEcCChH
Q 010538 39 NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGN-PHSQSDISLATCDIVRAAREQVLDYF---NASMKDYKCIFTSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~la~~~---~~~~~~~~i~~t~g~t 113 (508)
++.+.|+.+.... +++.+.+++.+ .+.+.... ....|.. ......+|+++|+++ +++++ +|++|+|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~Y~p----~~g~~~lr~aia~~~~~~~~~~d--~I~it~Ga~ 105 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHN-AVDELASEETFRGYGP----EQGYPFLREAIAENDYRGRIDPE--EIFISDGAK 105 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHH-HHhcccccccccCCCC----CCCCHHHHHHHHHHHHhcCCCHH--HEEECCCcH
Confidence 5789999876554 35555555543 33322111 1112211 123566788888876 68888 899999999
Q ss_pred HHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCC-----------eEEEEccCCccCccccccccccccccccc
Q 010538 114 AALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGA-----------AAFAIDVEEAVDNDGLSESLVTSTKISLL 182 (508)
Q Consensus 114 ~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~-----------~v~~v~~~~~~~~~~l~~~~~~~~~~~~d 182 (508)
+++.++. .+ +.+|+.|++....|+.+. ..++..|+ +++.+|.+....+.
T Consensus 106 ~al~~l~-~l-~~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~--------------- 165 (402)
T TIGR03542 106 CDVFRLQ-SL-FGSDNTVAVQDPVYPAYV---DSNVMAGRAGVLDDDGRYSKITYLPCTKENNFI--------------- 165 (402)
T ss_pred HHHHHHH-Hh-cCCCCEEEEeCCCCcchH---HHHHHcCCccccccccccceEEEeecchhhCCC---------------
Confidence 9999875 44 467899998886666554 44445677 88888875432221
Q ss_pred hhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCC
Q 010538 183 PIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQP 258 (508)
Q Consensus 183 ~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~ 258 (508)
++ +. . .+++++|++++++||||.+++.+++.++++ +|++++++||+|+++.. +..+
T Consensus 166 ~~-~~--------~--~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~---------~a~~~~~~iI~De~y~~~~~~~~~~ 225 (402)
T TIGR03542 166 PD-LP--------E--EPKIDIIYLCSPNNPTGTVLTKEQLKELVD---------YANEHGSLILFDAAYSAFISDPSLP 225 (402)
T ss_pred CC-cc--------c--cCCceEEEEeCCCCCCCccCCHHHHHHHHH---------HHHHcCeEEEEEchhhhhccCCCCC
Confidence 11 11 0 246799999999999999999777666665 45559999999999863 2122
Q ss_pred CCCCCC----CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCC
Q 010538 259 PDLSKY----PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTAS 332 (508)
Q Consensus 259 ~d~~~~----~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 332 (508)
..+... +.-+++.|++|.|| .+| +||++++++++......... .+.. .......+.+
T Consensus 226 ~~~~~~~~~~~~vi~~~SfSK~~g-~pGlRiG~~i~~~~l~~~~~~~~~~-----------~~~~-----~~~~~~~~~s 288 (402)
T TIGR03542 226 HSIFEIPGAKECAIEFRSFSKTAG-FTGVRLGWTVVPKELTYADGHSVIQ-----------DWER-----RQCTKFNGAS 288 (402)
T ss_pred cchhhCCCCcccEEEEecCccccC-CCCcceEEEEecHHHhhcchhhHHH-----------HHHH-----HhhhcccCCC
Confidence 222221 23477899999998 447 89999988765111000000 0000 0000011223
Q ss_pred hhHHHHHHHHHHHHHhcC---hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC
Q 010538 333 FLSIASIRHGFNLINSLT---VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG 409 (508)
Q Consensus 333 ~~~~~~l~~al~~~~~~g---~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 409 (508)
.....++. .++.+.+ ..+..+.+.+.++++.+.|++. ++++..+.+ ++++++++++.
T Consensus 289 ~~~q~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~--------~~f~~v~l~~~-- 348 (402)
T TIGR03542 289 YPVQRAAE---AAYAGEGLQPILEAISYYMENARILRKALEAA-------GFKVYGGEH--------APYLWVKTPEG-- 348 (402)
T ss_pred HHHHHHHH---HHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-------CceecCCCc--------eeEEEEECCCC--
Confidence 23222222 2222211 3445566778888888888875 466554332 78999998752
Q ss_pred CccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHH
Q 010538 410 SWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDA 488 (508)
Q Consensus 410 ~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev 488 (508)
++..++.+.| ++.||.+++|..|... ..+++||++.. +.+++
T Consensus 349 --~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~~--~~~~l 391 (402)
T TIGR03542 349 --ISSWDFFDFLLYQYHVVGTPGSGFGPS---------------------------------GEGFVRFSAFG--KRENI 391 (402)
T ss_pred --CCHHHHHHHHHHhCCEEEeCchhhCCC---------------------------------CCCEEEEEecC--CHHHH
Confidence 2223455555 5689999998654211 25789999653 78999
Q ss_pred HHHHHhhhhh
Q 010538 489 KVNRCSSFDF 498 (508)
Q Consensus 489 ~~l~~~~~~~ 498 (508)
+..++.|++.
T Consensus 392 ~~~l~~l~~~ 401 (402)
T TIGR03542 392 VEACERIKEA 401 (402)
T ss_pred HHHHHHHHhh
Confidence 9998888754
No 163
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.91 E-value=1.7e-22 Score=211.73 Aligned_cols=345 Identities=10% Similarity=0.056 Sum_probs=212.3
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCC-CCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEEcC
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGN-PHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIFTS 110 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~t~ 110 (508)
++.+.|+.+-.... ++.+.+++.+ .......+ ....|... .....+|+++|+++ +++++ +|++|+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~~----~G~~~LR~aia~~~~~~~g~~~~~~--~I~it~ 106 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHK-AVDEMGTAETFRGYGPE----QGYDFLREKIAENDYQARGCDISAD--EIFISD 106 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHH-HHhcccccCCccCCCCC----CCCHHHHHHHHHHHHHhcCCcCChh--hEEECC
Confidence 46788887765544 4444555433 33221111 11122111 12345667777764 67888 899999
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCe-----------EEEEccCCccCcccccccccccccc
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAA-----------AFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~-----------v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
|+++++.++.. + ..+|++|++....|+.+....+. .|.+ ++.+|++.+..+.
T Consensus 107 Ga~~al~~l~~-~-~~~gd~V~v~~P~Y~~~~~~~~~---~g~~~~~~~~~~~~~~~~v~~~~~~~~~------------ 169 (409)
T PRK07590 107 GAKCDTGNILD-I-FGPDNTIAVTDPVYPVYVDTNVM---AGRTGEANEDGRYSGIVYLPCTAENNFV------------ 169 (409)
T ss_pred CHHHHHHHHHH-h-cCCCCEEEEeCCCCcchHHHHHH---cCCcccccccccccceeEeecccccCCc------------
Confidence 99999998754 4 36899999988777766655444 4665 8888876433220
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----C
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----V 255 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g 255 (508)
+ ++. .+++++|++++++||||.+++.+++.++++ +|++++++||+|++++. +
T Consensus 170 ---~-d~~-----------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~---------~a~~~~~~iI~De~Y~~~~~~~ 225 (409)
T PRK07590 170 ---P-ELP-----------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVD---------YAKENGSLILFDAAYEAFISDP 225 (409)
T ss_pred ---c-cCc-----------ccCceEEEEeCCCCCcCCcCCHHHHHHHHH---------HHHHcCeEEEEEccchhhccCC
Confidence 0 111 256899999999999999999998888877 56679999999999863 2
Q ss_pred CCCCCCCCC----CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 256 TQPPDLSKY----PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 256 ~~~~d~~~~----~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
..+..+... +.-+++.|++|.+|.| | +||+++++++++.+...-..... ..+.. .......
T Consensus 226 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~p-GlRiG~~i~~~~li~~~~~~~~~~~~-------~~~~~-----~~~~~~~ 292 (409)
T PRK07590 226 SLPHSIYEIEGARECAIEFRSFSKTAGFT-GTRCAYTVVPKELKGKTSDGEGVSLN-------SLWNR-----RQSTKFN 292 (409)
T ss_pred CCCcchhhCCCcccceEEEecCccccCCc-CceeEEEEcCHHHhhhccccchhhhH-------HHHHH-----HHhhccc
Confidence 222223222 2347789999999834 7 89999998887532110000000 00000 0000011
Q ss_pred CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC
Q 010538 330 TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG 409 (508)
Q Consensus 330 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 409 (508)
+.+.....++..++..-....+++.++++++.++++.+.|++. ++.+..+.+ ++++|+++++.
T Consensus 293 ~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~~~~~~g--------~~f~wi~~~~~-- 355 (409)
T PRK07590 293 GVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-------GFEVYGGVN--------APYIWVKTPDG-- 355 (409)
T ss_pred CcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-------CCceecCCc--------ceEEEEECCCC--
Confidence 2333334444334431001125666778888889999999875 466554433 78999998753
Q ss_pred CccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHH
Q 010538 410 SWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDA 488 (508)
Q Consensus 410 ~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev 488 (508)
++..++.+.| +++||.+.+|..|... ..+++|||+ ..+.+++
T Consensus 356 --~~~~~~~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~--~~~~~~l 398 (409)
T PRK07590 356 --MSSWDFFDKLLQEANVVGTPGSGFGPS---------------------------------GEGYFRLSA--FGSRENV 398 (409)
T ss_pred --CCHHHHHHHHHHHCCEEEeChhHhCCC---------------------------------CCCEEEEEc--cCCHHHH
Confidence 2223455554 5789999998755221 257899996 3588999
Q ss_pred HHHHHhhhhh
Q 010538 489 KVNRCSSFDF 498 (508)
Q Consensus 489 ~~l~~~~~~~ 498 (508)
+..++.|.+.
T Consensus 399 ~~~l~rl~~~ 408 (409)
T PRK07590 399 LEAMERIKKA 408 (409)
T ss_pred HHHHHHHHhh
Confidence 9999888764
No 164
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=7.9e-23 Score=217.24 Aligned_cols=354 Identities=11% Similarity=0.064 Sum_probs=224.8
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcc-ccCCC-----C--CccchhhhhhHHHHHHHHHHHHHcC--------CCCC
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTN-VYGNP-----H--SQSDISLATCDIVRAAREQVLDYFN--------ASMK 102 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~-~~~~~-----~--~~~~~~~~~~~~~~~~r~~la~~~~--------~~~~ 102 (508)
++.|.|+.+-...+. ..+.+.++..... ..... . ..|.. ......+|+.+|++++ ++++
T Consensus 38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~----~~G~~~LR~aiA~~l~~~~~~~~~v~~~ 112 (468)
T PLN02450 38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQD----YHGLPAFKNALAEFMSEIRGNKVTFDPN 112 (468)
T ss_pred CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCC----CCChHHHHHHHHHHHHHhhCCCCCcChH
Confidence 468999987766544 5555555432110 00000 0 01111 1123456677777664 5777
Q ss_pred CceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccc
Q 010538 103 DYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLL 182 (508)
Q Consensus 103 ~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d 182 (508)
+|++|+|+++++.+++.++ ..+|+.|+++...|+.+...... ..|++++.||.+.+..+ .++
T Consensus 113 --~Iiit~Ga~~al~~l~~~l-~~pGd~Vlv~~P~Y~~~~~~~~~--~~g~~~v~v~~~~~~~~-------------~~~ 174 (468)
T PLN02450 113 --KLVLTAGATSANETLMFCL-AEPGDAFLLPTPYYPGFDRDLKW--RTGVEIVPIHCSSSNGF-------------QIT 174 (468)
T ss_pred --HeEEccChHHHHHHHHHHh-CCCCCEEEECCCCCCchHHHHhh--cCCcEEEEEecCCccCC-------------cCC
Confidence 8999999999999999998 68899999998777776544331 36899999998632222 114
Q ss_pred hhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---CC-CC
Q 010538 183 PIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC---VT-QP 258 (508)
Q Consensus 183 ~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~---g~-~~ 258 (508)
+++++ +++.+....+.+++++++++++||||.+++.+.+.++++ +|++++++||+|.+++. .. ..
T Consensus 175 ~~~le--~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~---------~a~~~~~~iI~DE~Y~~~~f~~~~~ 243 (468)
T PLN02450 175 ESALE--EAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVD---------FITAKNIHLISDEIYSGTVFDSPGF 243 (468)
T ss_pred HHHHH--HHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHH---------HHHHCCcEEEEEccccccccCCCCc
Confidence 66666 444221112347899999999999999999998888776 56669999999999873 11 11
Q ss_pred CC---C-C--------CCCCcEEEEeccccccCCCc--ceEEEEechh-HhhhccccccCceEEecccchhhhhhccCcc
Q 010538 259 PD---L-S--------KYPVDFVVMSFYKIFGYPTG--LGALIMRNDA-AKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 259 ~d---~-~--------~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
.+ + . ..+--+++.|++|.|| .+| +|+++++++. .+.+...
T Consensus 244 ~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~-l~GlRiG~li~~~~~l~~~~~~~------------------------ 298 (468)
T PLN02450 244 VSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG-LPGFRVGAIYSNDEMVVSAATKM------------------------ 298 (468)
T ss_pred ccHHHHhhhcccccCCCCCcEEEEEeccccCC-CCCccEEEEEECCHHHHHHHHHH------------------------
Confidence 11 1 0 1123478999999998 557 8999998664 3322211
Q ss_pred ccccCCCCChhHHHHHHHHHHHH--HhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDGTASFLSIASIRHGFNLI--NSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~gt~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
. ..+..+.....++..+++-- .+..++..++++.+.++.+.+.|++. ++.+..+.+ +.++|
T Consensus 299 ~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-------gi~~~~~~~--------g~flw 361 (468)
T PLN02450 299 S--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-------GIKCLKSNA--------GLFCW 361 (468)
T ss_pred h--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCc--------eEEEE
Confidence 0 01122333344444343310 01124667788888899999999876 566554433 66999
Q ss_pred EEeeCC-CCCcc-CHHHHH-HHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEe
Q 010538 402 FNLKRP-DGSWF-GYREVE-KLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVS 478 (508)
Q Consensus 402 ~~~~~~-~~~~~-~~~~l~-~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 478 (508)
++++.. +...+ ...++. +.++++||.+.+|..|... .++++|++
T Consensus 362 i~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~---------------------------------~~g~~Rl~ 408 (468)
T PLN02450 362 VDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT---------------------------------EPGWFRVC 408 (468)
T ss_pred EEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC---------------------------------CCCEEEEE
Confidence 998642 11111 112233 4456789999999866332 26899999
Q ss_pred cCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 479 FGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 479 ~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
++. .+.++++..++.|+++++-+
T Consensus 409 f~~-~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 409 FAN-MSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred ecC-CCHHHHHHHHHHHHHHHHhc
Confidence 996 45799999999999887643
No 165
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.6e-22 Score=215.82 Aligned_cols=307 Identities=12% Similarity=0.128 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHcC--------CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEE
Q 010538 86 VRAAREQVLDYFN--------ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFA 157 (508)
Q Consensus 86 ~~~~r~~la~~~~--------~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~ 157 (508)
...+|+.+|++++ ++++ +|++|+|+++|+.+++.++ ..+|+.|+++...|+.+...+. .+.|++++.
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe--~Ivit~Ga~~al~~l~~~l-~~pGD~Vlv~~P~Y~~~~~~~~--~~~G~~vv~ 170 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPE--RVVMSGGATGANETIMFCL-ADPGDVFLIPSPYYAAFDRDLR--WRTGVEIIP 170 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChh--hEEEccchHHHHHHHHHHh-CCCCCEEEECCCCccchHHHHH--hhCCCEEEE
Confidence 3456666666654 6788 8999999999999999999 6889999999877777654332 136999999
Q ss_pred EccCCc--cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccc
Q 010538 158 IDVEEA--VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILE 235 (508)
Q Consensus 158 v~~~~~--~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~ 235 (508)
||++.. ..+ +++.++ .++.+....+.++++|++++++||||.++|.+++.++++
T Consensus 171 v~~~~~~~~~~---------------~~~~le--~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~------- 226 (496)
T PLN02376 171 VPCSSSDNFKL---------------TVDAAD--WAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR------- 226 (496)
T ss_pred EeCCCCccCcC---------------CHHHHH--HHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHH-------
Confidence 998632 223 566665 332110111357899999999999999999998888777
Q ss_pred cCCCCCCCeEEEEeccccC----CCCCCCCCCC---------CCc--EEEEeccccccCCCc--ceEEEEechhHhh-hc
Q 010538 236 ISPFSKGRWMVLIDAAKGC----VTQPPDLSKY---------PVD--FVVMSFYKIFGYPTG--LGALIMRNDAAKL-LK 297 (508)
Q Consensus 236 ~~~~~~~g~~vivD~a~~~----g~~~~d~~~~---------~~D--~~~~S~~K~~g~P~G--~G~l~~~~~~~~~-l~ 297 (508)
+|++++++||+|++++. +...+++... +.+ +++.|++|.|| .+| +|+++..++.+.. ++
T Consensus 227 --~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~g-lpGlRvG~li~~~~~l~~~~~ 303 (496)
T PLN02376 227 --FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMG-LPGFRVGIVYSFNDSVVSCAR 303 (496)
T ss_pred --HHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCC-CCcceEEEEEECCHHHHHHHH
Confidence 56669999999999874 2122221111 112 45789999998 447 8999996554322 21
Q ss_pred cccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHH---HHHhcChHHHHHHHHHHHHHHHHHHhcccC
Q 010538 298 NTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN---LINSLTVPAICRHIASLGMYVRKVLLSLRH 374 (508)
Q Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~---~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~ 374 (508)
.. . ..+..+.....++...++ ++.+ .+...++++.+..+.+.+.|++.
T Consensus 304 ~~------------------------~--~~~~vs~~~Q~a~~~~L~d~~~~~~-~l~~~r~~l~~r~~~l~~~L~~~-- 354 (496)
T PLN02376 304 KM------------------------S--SFGLVSSQTQLMLASMLSDDQFVDN-FLMESSRRLGIRHKVFTTGIKKA-- 354 (496)
T ss_pred HH------------------------h--hcCCCCHHHHHHHHHHhCChhHHHH-HHHHHHHHHHHHHHHHHHHHHHC--
Confidence 11 0 011223333333333332 1111 24455777788888888888875
Q ss_pred CCCCceEEEecCCCCCcccCCCCceEEEEeeCC-CC-Ccc-CHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhh
Q 010538 375 ENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP-DG-SWF-GYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDL 450 (508)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~~-~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~ 450 (508)
++++..+.+ +.++|++++.. .. ..+ ...++.+.| ++.||.+.+|..|...
T Consensus 355 -----gi~~~~~~a--------G~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~------------- 408 (496)
T PLN02376 355 -----DIACLTSNA--------GLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT------------- 408 (496)
T ss_pred -----CCcccCCCc--------eEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC-------------
Confidence 566655543 78999998642 11 111 123455555 4569999999866321
Q ss_pred hhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 451 LSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.++++||+++.. +.++++..++.|+++++
T Consensus 409 --------------------~~g~~Ri~fa~~-~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 409 --------------------EPGWFRICFANM-DDDTLHVALGRIQDFVS 437 (496)
T ss_pred --------------------CCCEEEEEeeCC-CHHHHHHHHHHHHHHHH
Confidence 268999999953 46889999998888774
No 166
>PRK05839 hypothetical protein; Provisional
Probab=99.91 E-value=5.3e-22 Score=205.59 Aligned_cols=344 Identities=15% Similarity=0.109 Sum_probs=214.0
Q ss_pred chHHHHHHhhccCC----CCCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-
Q 010538 25 SIDQIRATEFKRLE----NGTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN- 98 (508)
Q Consensus 25 ~~~~~r~~~f~~~~----~~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~- 98 (508)
.+..+|+ .+..+. .+.+.|+.+.... +++.+.+++.+.. ... ..|........+.+++.+.+++..|
T Consensus 7 ~~~~~~~-~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~-~~~-----~~Y~~~~G~~~lr~aia~~l~~~~g~ 79 (374)
T PRK05839 7 PFEKLRE-LLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNA-HLL-----NKYPKSAGEESLREAQRGFFKRRFKI 79 (374)
T ss_pred hHHHHHH-HHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHh-hcc-----CCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 4556666 655332 3788888876553 3444444443321 111 1122111223444555555566556
Q ss_pred -CCCCCceEEEcCChHHHHHHHHhhcCC-CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccc
Q 010538 99 -ASMKDYKCIFTSGATAALKLVGEAFPW-SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTS 176 (508)
Q Consensus 99 -~~~~~~~i~~t~g~t~al~~~~~~l~~-~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~ 176 (508)
++++ +|++|+|+++++..++.++.. ++|+.|+++...|+.+... ++..|++++.+|.+.+..+.
T Consensus 80 ~~~~~--~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~---~~~~g~~v~~v~~~~~~~~~--------- 145 (374)
T PRK05839 80 ELKEN--ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGA---AIASRAKVLLMPLTKENDFT--------- 145 (374)
T ss_pred CCCcc--eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHH---HHhcCCEEEEeecccccCCc---------
Confidence 5777 899999999999998887643 5789999887555555444 45679999999987433220
Q ss_pred cccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC
Q 010538 177 TKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT 256 (508)
Q Consensus 177 ~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~ 256 (508)
+|....+ .+++++|++++++||||.+++.+++.++++ +|+++|++||+|++++.-.
T Consensus 146 ----~d~~~~~-----------~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~---------~~~~~~~~ii~DE~Y~~~~ 201 (374)
T PRK05839 146 ----PSLNEKE-----------LQEVDLVILNSPNNPTGRTLSLEELIEWVK---------LALKHDFILINDECYSEIY 201 (374)
T ss_pred ----CCcchhh-----------hccccEEEEeCCCCCcCcccCHHHHHHHHH---------HHHHcCCEEEeccchhhcc
Confidence 0111111 135799999999999999999998888877 5666999999999976311
Q ss_pred ---CCCCCC---------CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 257 ---QPPDLS---------KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 257 ---~~~d~~---------~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
...++. ..+--+++.|++|.|+.| | +||+++++++++.+.....
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~-GlRiG~ii~~~~~~~~~~~~~~--------------------- 259 (374)
T PRK05839 202 ENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP-GLRSGFIAGDASILKKYKAYRT--------------------- 259 (374)
T ss_pred cCCCCCCHhhhhcccCccccCcEEEEeccccccCCc-cceeEEEecCHHHHHHHHHHHh---------------------
Confidence 111111 112348889999988845 7 8999998888766543310
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 323 EELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 323 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
......+.....++..++. .+..++.+++++.+.++++.+.| ++. .|++ +.++|+
T Consensus 260 ---~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l----------~~~--~p~g--------g~fi~~ 314 (374)
T PRK05839 260 ---YLGCASPLPLQKAAAVAWL--DDEHAEFFRNIYAKNLKLAREIL----------GIT--IPPA--------TFYVWL 314 (374)
T ss_pred ---hcCCCCChHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHhc----------CCC--CCCe--------eEEEEE
Confidence 0011122222333333332 22335566677777776665544 122 2222 788898
Q ss_pred EeeCCCCCccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC
Q 010538 403 NLKRPDGSWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY 481 (508)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 481 (508)
++++. .++.+.| +++||.+.+|..+.... ..++++|||++.
T Consensus 315 ~~~~~-------~~~~~~l~~~~gi~v~pg~~f~~~~-------------------------------~~~~~iRis~~~ 356 (374)
T PRK05839 315 PVDND-------EEFTKKLYQNEGIKVLPGSFLGRNG-------------------------------IGKGYVRIALVY 356 (374)
T ss_pred eCCCh-------HHHHHHHHHHCCEEEeCchhhCCCC-------------------------------CCCCeEEEEecC
Confidence 88532 2356666 46999999986543211 125899999974
Q ss_pred CCCHHHHHHHHHhhhhhhh
Q 010538 482 MSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 482 ~~t~eev~~l~~~~~~~~~ 500 (508)
+.+++...++.|+++++
T Consensus 357 --~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 357 --DTPKLEKALEIIKTYLE 373 (374)
T ss_pred --CHHHHHHHHHHHHHHhh
Confidence 68999999999887764
No 167
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=4.8e-22 Score=204.67 Aligned_cols=282 Identities=13% Similarity=-0.002 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHc---CCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 84 DIVRAAREQVLDYF---NASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 84 ~~~~~~r~~la~~~---~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
.+.+++.+.+.+.+ |++++ +|++|+|+++++..++..+..++|+.|++++..|+++.... +..|++++.++.
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~ 134 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGA---LLAGATPVAADD 134 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHH---HhcCCEEeccCC
Confidence 33444444444443 36677 99999999999999888775588999999998887776554 345888776631
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
++.+. .+++++|++++++||||.++|.+++.++++ +|+
T Consensus 135 ----------------------~~~l~-----------~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~---------~a~ 172 (357)
T TIGR03539 135 ----------------------PTELD-----------PVGPDLIWLNSPGNPTGRVLSVDELRAIVA---------WAR 172 (357)
T ss_pred ----------------------hhhcC-----------ccCccEEEEeCCCCCcCccCCHHHHHHHHH---------HHH
Confidence 12223 246799999999999999999887666655 455
Q ss_pred CCCeEEEEeccccC-CC--CCCCCC-------CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEe
Q 010538 241 KGRWMVLIDAAKGC-VT--QPPDLS-------KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAA 308 (508)
Q Consensus 241 ~~g~~vivD~a~~~-g~--~~~d~~-------~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~ 308 (508)
++|+++|+|+++.. .. .++..- ..+-.+++.|++|.|+ .+| +||++.+++.++.+.....
T Consensus 173 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~G~R~G~~i~~~~~~~~~~~~~~------- 244 (357)
T TIGR03539 173 ERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSN-LAGYRAGFVAGDPALVAELLTVRK------- 244 (357)
T ss_pred HcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccC-CCceeEEEEecCHHHHHHHHHHHh-------
Confidence 59999999999852 21 111110 0122488899999987 446 7999988888766543310
Q ss_pred cccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCC
Q 010538 309 SIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYT 388 (508)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~ 388 (508)
.....++.....++..+++. ...++.+++++.+.++++.+.|++. ++.+..+.+
T Consensus 245 -----------------~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-------g~~~~~p~~ 298 (357)
T TIGR03539 245 -----------------HAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-------GFRIDHSEA 298 (357)
T ss_pred -----------------hcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-------CCCCcCCCc
Confidence 01122344444444445532 1235667788888889999999875 455544432
Q ss_pred CCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccC
Q 010538 389 SEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIH 468 (508)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 468 (508)
+.++++.++. +..++.+.|.++||.+.+|..+...
T Consensus 299 --------~~~~~~~~~~------~~~~~~~~l~~~gV~v~pg~~f~~~------------------------------- 333 (357)
T TIGR03539 299 --------GLYLWATRGE------DAWDTVDRLAELGILVAPGDFYGPA------------------------------- 333 (357)
T ss_pred --------cEEEEEECCC------CHHHHHHHHHhCCEEECCccccCCC-------------------------------
Confidence 5567666542 1234778889999999998643221
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 469 GKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 469 ~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
.++++|||++. +.++++..++.|
T Consensus 334 --~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 334 --GSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred --CCCeEEEEecC--CHHHHHHHHHhh
Confidence 25789999985 678998888765
No 168
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=199.73 Aligned_cols=309 Identities=17% Similarity=0.147 Sum_probs=210.0
Q ss_pred CCCeeeeCCCCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 39 NGTVYLDHAGAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 39 ~~~iyld~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
.+.++|+++... ++++.+++++.+.+... +...|+. .....+|++++++++++++ +|++|+|+++++.
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~-----~g~~~lr~~ia~~~~~~~~--~I~~t~G~~~~l~ 86 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRV----PFNRYPH-----ITSDPLREAIAEFYGLDAE--NIAVGNGSDELIS 86 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcC----ccccCCC-----CCHHHHHHHHHHHhCcCcc--eEEEcCCHHHHHH
Confidence 357999998866 45677777765543211 1122221 1257789999999999998 9999999999999
Q ss_pred HHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 118 LVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 118 ~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+++..+ +|+.|+++...|+. +...++..|++++.++++.+..+ |++.++ +.+
T Consensus 87 ~~~~~~---~gd~V~v~~P~y~~---~~~~~~~~g~~~~~v~~~~~~~~---------------d~~~l~--~~~----- 138 (337)
T PRK03967 87 YLVKLF---EGKHIVITPPTFGM---YSFYAKLNGIPVIDVPLKEDFTI---------------DGERIA--EKA----- 138 (337)
T ss_pred HHHHHh---CCCeEEEeCCChHH---HHHHHHHcCCeEEEeecCCCCCc---------------CHHHHH--Hhc-----
Confidence 988876 48899988866653 33345567999999998754444 577777 432
Q ss_pred CCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC--CCCC-CCCCCCcEEEEecc
Q 010538 198 AGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT--QPPD-LSKYPVDFVVMSFY 274 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~--~~~d-~~~~~~D~~~~S~~ 274 (508)
++++++++++++||||.+++.++|.++++ +++++|+|+++..-. .... +...+--+++.|++
T Consensus 139 --~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-------------~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~S 203 (337)
T PRK03967 139 --KNASAVFICSPNNPTGNLQPEEEILKVLE-------------TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFS 203 (337)
T ss_pred --cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-------------cCCEEEEECchhhhcccchHHHHhhCCCEEEEecch
Confidence 46789999999999999999999999986 699999999986311 1111 11112347889999
Q ss_pred ccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChH
Q 010538 275 KIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVP 352 (508)
Q Consensus 275 K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 352 (508)
|.|| .+| +||++++++.++.+..... ..+.+.....++..+++... . ..
T Consensus 204 K~~~-l~GlRiG~iv~~~~~i~~~~~~~~--------------------------~~~~~~~~q~~~~~~l~~~~-~-~~ 254 (337)
T PRK03967 204 KAFG-LAGIRAGYAIANEEIIDALYRIKP--------------------------PFSLNILTMKIVRLALDHYD-L-IE 254 (337)
T ss_pred Hhhc-chhhhheeeecCHHHHHHHHhhcC--------------------------CCCCCHHHHHHHHHHHhCHH-H-HH
Confidence 9998 547 8999999888776654311 11233344444444444211 1 33
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCC
Q 010538 353 AICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGC 432 (508)
Q Consensus 353 ~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~ 432 (508)
+..+++.+.++.+.+.|.+. ..+.+ ++++++.++ +.+.|.++||.|+.+.
T Consensus 255 ~~~~~~~~~r~~l~~~L~~~-----------~~~~~--------~~~~~~~~~-----------~~~~l~~~gi~v~~~~ 304 (337)
T PRK03967 255 ERIDYIIKERERVRRELGEY-----------AYPSD--------ANFLLLKLD-----------AYDYLLENGIVVRKLS 304 (337)
T ss_pred HHHHHHHHHHHHHHHHhccC-----------cCCCC--------CcEEEEhHH-----------HHHHHHHCCEEEEeCC
Confidence 44455566667777777542 11222 677777652 4677778899998632
Q ss_pred CCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 433 FCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 433 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
. . ..+++|++++ +.++.++++++|.++.
T Consensus 305 ~---~---------------------------------~~~~~Ri~~~---~~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 305 G---R---------------------------------LEGHIRVTVG---KREENDEFIKALKEIK 332 (337)
T ss_pred C---C---------------------------------CCCeEEEecC---CHHHHHHHHHHHHHHH
Confidence 1 0 1568999999 7888999998887764
No 169
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9.6e-22 Score=203.24 Aligned_cols=321 Identities=16% Similarity=0.107 Sum_probs=213.9
Q ss_pred CCeeeeCCCCCC-CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc------CCCCCCceEEEcCCh
Q 010538 40 GTVYLDHAGATL-YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF------NASMKDYKCIFTSGA 112 (508)
Q Consensus 40 ~~iyld~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~~i~~t~g~ 112 (508)
..+.|+.+-... +++.+++++.+.+.... .. ...|+. . ....+|+.+|+++ +++++ +|++|+|+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~-~~-~~~Y~~-~----g~~~lr~aia~~~~~~~~~~~~~~--~I~it~G~ 97 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAA-AG-LNRYPD-R----DAVALRADLAAYLTAQTGVGLTVE--NVWAANGS 97 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhh-hh-hccCCC-C----chHHHHHHHHHHhhhhccCCCChh--hEEECCCH
Confidence 457788776554 45556666544332110 00 011211 1 1355777777777 56777 89999999
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCC
Q 010538 113 TAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASF 192 (508)
Q Consensus 113 t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l 192 (508)
++++.+++.++ .++|+.|++....|+.+. ..++..|.+++.++.+.+..+ |++.++ +++
T Consensus 98 ~~~l~~~~~~~-~~~gd~v~v~~P~y~~~~---~~~~~~g~~~~~~~~~~~~~~---------------d~~~l~--~~~ 156 (368)
T PRK03317 98 NEILQQLLQAF-GGPGRTALGFVPSYSMHP---IIARGTHTEWVEGPRAADFTL---------------DVDAAV--AAI 156 (368)
T ss_pred HHHHHHHHHHh-cCCCCEEEEeCCChHHHH---HHHHhcCCeeEEcccCCCCCC---------------CHHHHH--HHH
Confidence 99999999998 578999998775555444 444557888888877544444 577887 555
Q ss_pred CCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC-CC-CC---C-CCCCC
Q 010538 193 PERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT-QP-PD---L-SKYPV 266 (508)
Q Consensus 193 ~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~-~~-~d---~-~~~~~ 266 (508)
+ .++++++++++++||||.+++.+++.++++. .++++|+|++++.-. .. .. + ...+.
T Consensus 157 ~-----~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~------------~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~ 219 (368)
T PRK03317 157 A-----EHRPDVVFLTSPNNPTGTALPLDDVEAILDA------------APGIVVVDEAYAEFRRSGTPSALTLLPEYPR 219 (368)
T ss_pred h-----ccCCCEEEEeCCCCCCCCCCCHHHHHHHHHH------------CCceEEEeCCchhhcccCCcCHHHHHHhCCC
Confidence 3 2357888999999999999999999999996 589999999987321 11 11 1 11122
Q ss_pred cEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN 344 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~ 344 (508)
.+++.|++|.+|.| | +|++++++++++.+..... ....+.....++.++++
T Consensus 220 ~i~~~SfSK~~g~~-GlRiG~~~~~~~~~~~l~~~~~--------------------------~~~~s~~~~~a~~~~l~ 272 (368)
T PRK03317 220 LVVSRTMSKAFAFA-GGRLGYLAAAPAVVDALRLVRL--------------------------PYHLSAVTQAAARAALR 272 (368)
T ss_pred EEEEEechhhhccc-hhhhhhhhCCHHHHHHHHhcCC--------------------------CCCCCHHHHHHHHHHhh
Confidence 37788999999834 7 7999999888776653310 11223344444455555
Q ss_pred HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE-EeeCCCCCccCHHHHHHHHhh
Q 010538 345 LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF-NLKRPDGSWFGYREVEKLASL 423 (508)
Q Consensus 345 ~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~l~~~L~~ 423 (508)
.... +.+..+++.+.++++.+.|++. ++.+..+. ++++.+ .+. +...+.+.|.+
T Consensus 273 ~~~~--~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~---------~~~~~~~~~~-------~~~~~~~~l~~ 327 (368)
T PRK03317 273 HADE--LLASVAALRAERDRVVAWLREL-------GLRVAPSD---------ANFVLFGRFA-------DRHAVWQGLLD 327 (368)
T ss_pred CHHH--HHHHHHHHHHHHHHHHHHHHHC-------CCEeCCCC---------CcEEEEeccC-------CHHHHHHHHHH
Confidence 3322 3444566777888888888875 56655443 444444 332 12357888889
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+||.++... .++++|++++ +.+++++++++++++++
T Consensus 328 ~Gv~v~~~~--------------------------------------~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 328 RGVLIRDVG--------------------------------------IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred CCEEEEeCC--------------------------------------CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 999997521 1578999987 88999999999988764
No 170
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.2e-21 Score=205.42 Aligned_cols=160 Identities=15% Similarity=0.066 Sum_probs=135.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~ 161 (508)
....+++++.+|++.|++. .++|+|+|+|+++++.++ +++|++||++..+|++....+. .+.+.|++++.++.+
T Consensus 63 ~p~~~~le~~lA~l~g~~~----av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 137 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVG----AIATASGQAALHLAIATL-MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG 137 (433)
T ss_pred ChHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC
Confidence 4557889999999999864 488999999999999998 7899999999999987666544 356789999999864
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
|+++++ ++| +++|++|++.+++||+|.+.|+++|.++||+
T Consensus 138 --------------------d~~~l~--~~i------~~~TklV~~e~~~np~g~v~Di~~I~~la~~------------ 177 (433)
T PRK08134 138 --------------------DIDGWR--AAI------RPNTRLLFGETLGNPGLEVLDIPTVAAIAHE------------ 177 (433)
T ss_pred --------------------CHHHHH--Hhc------CCCCeEEEEECCCcccCcccCHHHHHHHHHH------------
Confidence 256777 444 5789999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR 289 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~ 289 (508)
+|+++++|++|+.|....++ ++++|+++.|+||+++ |.| +|.+++.
T Consensus 178 ~gi~livD~t~a~~~~~~pl-~~GaD~vv~S~tK~l~-g~g~~~gG~v~~ 225 (433)
T PRK08134 178 AGVPLLVDSTFTTPYLLRPF-EHGADLVYHSATKFLG-GHGTAIGGVLVD 225 (433)
T ss_pred cCCEEEEECCCcccccCCch-hcCCCEEEeccccccC-CCCCceEEEEEe
Confidence 99999999999988876655 6799999999999999 546 6666664
No 171
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=6.5e-22 Score=194.40 Aligned_cols=332 Identities=14% Similarity=0.081 Sum_probs=228.2
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHh
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGE 121 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~ 121 (508)
++|.+...+.++|.+++++.+.-. -+ ...+.......++.+.++++++. + .++|++++|+|+.+++.
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~------~~---~~~YG~D~~~~~~e~~~ae~~g~--~--a~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA------VG---DDVYGEDPTTNALEQRIAELFGK--E--AALFVPSGTQANQLALA 68 (342)
T ss_pred CccccCccCCCCHHHHHHHHhccc------cC---CCCCCCCHHHHHHHHHHHHHhCC--c--eEEEecCccHHHHHHHH
Confidence 466677777779999988765310 11 12233456688899999999999 4 69999999999999999
Q ss_pred hcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCC
Q 010538 122 AFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDA 201 (508)
Q Consensus 122 ~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~ 201 (508)
+. .+++..|++....|-.....-......+.....+....++.+ ++++++ ++++..+.+...
T Consensus 69 ~~-~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl---------------t~e~v~--~~i~~~d~~~~~ 130 (342)
T COG2008 69 AH-CQPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKL---------------TPEDVE--AAIRPDDIHHAP 130 (342)
T ss_pred Hh-cCCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCc---------------CHHHHH--HhhcCCCcccCC
Confidence 99 599999999999997765532211112333333333346666 689999 877654434445
Q ss_pred ceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---CCCCCCCCCC--CCcEEEEecccc
Q 010538 202 YNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC---VTQPPDLSKY--PVDFVVMSFYKI 276 (508)
Q Consensus 202 t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~---g~~~~d~~~~--~~D~~~~S~~K~ 276 (508)
+.++++...+|.-|+++|+++|.++.+ +|+++|+.+++||+--+ ....++...+ ++|+++++++|.
T Consensus 131 ~~~~~~e~~~te~GtVy~l~el~~i~~---------~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~ 201 (342)
T COG2008 131 TPLAVLENTATEGGTVYPLDELEAISA---------VCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKG 201 (342)
T ss_pred CceEEEeeccCCCceecCHHHHHHHHH---------HHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccC
Confidence 555555555568899999998888877 67779999999998432 2222444433 799999999998
Q ss_pred ccCCCcceEEEEechhHhhhccccc--cCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHH
Q 010538 277 FGYPTGLGALIMRNDAAKLLKNTYF--SGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAI 354 (508)
Q Consensus 277 ~g~P~G~G~l~~~~~~~~~l~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i 354 (508)
++.|.| .+++++++++++++.... |++ ..-..+.+.. .+-++.+.-....
T Consensus 202 g~~~~g-Aiv~gn~~~~~~a~~~rK~~Ggl--------------------------~~k~r~laA~-~~~~l~~~~~~~~ 253 (342)
T COG2008 202 GGAPVG-AIVFGNRDFAKRARRWRKRAGGL--------------------------MRKARFLAAQ-GLYALEDDVWRLA 253 (342)
T ss_pred Ccceee-eEEEcCHHHHHHHHHHHHHhccc--------------------------HhhhhHHHHH-HHHHHhccHHHHH
Confidence 886754 888889998877653322 221 1111122222 2233333335666
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCC
Q 010538 355 CRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFC 434 (508)
Q Consensus 355 ~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~ 434 (508)
..|..+++++|.+.+.+. +|+++..|+. .++|.+++++. ....|...|+....|..
T Consensus 254 ~~Han~mA~~La~~~~~~------~G~~~~~~~~--------tN~vf~~l~~~---------~i~~l~~~~~~~~~~~~- 309 (342)
T COG2008 254 ADHANAMAARLAEGLEAK------PGVKLAFPVE--------TNMVFVRLPES---------AIEALRLAGALFYRGVL- 309 (342)
T ss_pred HHHHHHHHHHHHHhhhhc------CCceeccCCc--------ccEEEEECChH---------HHHHHHhhchhheeeee-
Confidence 777788899999999876 4899998854 79999998763 33566666666443320
Q ss_pred CchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCC-ceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 435 NPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPT-GAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 435 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
.. .. ..+|+..|+.+|++||+.+++.++.+.
T Consensus 310 ~~----------------------------------~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 310 IG----------------------------------AHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cc----------------------------------CCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 00 02 379999999999999999999988764
No 172
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=2.1e-22 Score=207.42 Aligned_cols=298 Identities=19% Similarity=0.170 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHcC------CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEE
Q 010538 85 IVRAAREQVLDYFN------ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAI 158 (508)
Q Consensus 85 ~~~~~r~~la~~~~------~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v 158 (508)
..+.+|+.+|++++ .+++. .|++++|+.+++..+...+...+|+.|+++...|+.+... ++..|.+++.+
T Consensus 45 g~~~lr~~ia~~~~~~~~~~~~~~~-~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~---~~~~g~~~~~~ 120 (363)
T PF00155_consen 45 GYPELREAIADFLGRRYGVPVDPEA-NILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEA---ARLLGAEVIPV 120 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTHHTTGGE-GEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHH---HHHTTSEEEEE
T ss_pred hhHHHHHHHHHHhhhccCcccccce-EEEEecccccchhhhhhcccccccccceecCCcccccccc---ccccCceeeec
Confidence 46778899999988 44431 5999999999998888887446789999998777766554 44569999999
Q ss_pred ccCC--ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 159 DVEE--AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 159 ~~~~--~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
|++. +..+ |++.++ +.+++....+.++++|+++.++||||..+|.+++.++++
T Consensus 121 ~~~~~~~~~~---------------d~~~l~--~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~-------- 175 (363)
T PF00155_consen 121 PLDSENDFHL---------------DPEALE--EALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAE-------- 175 (363)
T ss_dssp EEEETTTTEE---------------THHHHH--HHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHH--------
T ss_pred cccccccccc---------------cccccc--cccccccccccccceeeecccccccccccccccccchhh--------
Confidence 9652 2333 567776 544321111125789999999999999999999999955
Q ss_pred CCCCCCCeEEEEeccccCCCCC-CC------CCCCCC-cEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceE
Q 010538 237 SPFSKGRWMVLIDAAKGCVTQP-PD------LSKYPV-DFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTV 306 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~g~~~-~d------~~~~~~-D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~ 306 (508)
+|+++|+++++|++++..... .+ .-..+. .+++.|++|.|| ..| +|++++++++++.+......+
T Consensus 176 -~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRvG~i~~~~~~~~~l~~~~~~~--- 250 (363)
T PF00155_consen 176 -LAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG-LPGLRVGYIVAPPELIERLRRFQRSG--- 250 (363)
T ss_dssp -HHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT-SGGGTEEEEEEEHHHHHHHHHHHHHT---
T ss_pred -hhcccccceeeeeceeccccCCCccCcccccccccccceeeeecccccc-ccccccccccchhhhhhhhhhccccc---
Confidence 445599999999999864333 11 111123 488999999998 447 899999888877665442111
Q ss_pred EecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q 010538 307 AASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSL--TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY 384 (508)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~--g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~ 384 (508)
..+......+...+...... .++++.+++++.++++.+.|++. ++.+.
T Consensus 251 -----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-------~~~~~ 300 (363)
T PF00155_consen 251 -----------------------LSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-------GITVL 300 (363)
T ss_dssp -----------------------TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TSEEE
T ss_pred -----------------------cccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-------hhhee
Confidence 11333333333333322211 36888999999999999999887 68888
Q ss_pred cCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhC-CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCC
Q 010538 385 GTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLS-GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDD 463 (508)
Q Consensus 385 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 463 (508)
.++. +.+++..++.. +..++.+.|.++ ||.+.+|..+..
T Consensus 301 ~~~~--------~~~~~~~~~~~-----~~~~l~~~L~~~~gi~v~pg~~~~~--------------------------- 340 (363)
T PF00155_consen 301 PPEA--------GFFLWVRLDPN-----DAEELAQELLEEYGILVRPGSYFGV--------------------------- 340 (363)
T ss_dssp HHSB--------SSEEEEEESHH-----HHHHHHHHHHHHHTEEEEEGGGGTS---------------------------
T ss_pred eccC--------ccEEEEEcccc-----hHHHHHHHHHHhCCEEEEecCCCCC---------------------------
Confidence 7664 56776666543 223477777776 999999864322
Q ss_pred ccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 464 NDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 464 ~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
++++|+++ ...+.++++++++.|
T Consensus 341 --------~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 341 --------PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp --------TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred --------CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 57899999 667999999998875
No 173
>PRK06855 aminotransferase; Validated
Probab=99.90 E-value=1.2e-21 Score=206.67 Aligned_cols=309 Identities=11% Similarity=0.009 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHc----C--CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEc
Q 010538 86 VRAAREQVLDYF----N--ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAID 159 (508)
Q Consensus 86 ~~~~r~~la~~~----~--~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~ 159 (508)
...+|+.+++++ | ++++ +|++|+|+++|+.+++. + ..+|+.|++....|+.+.... ....|++++.+|
T Consensus 75 ~~~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~~~~~~~--~~~~g~~~v~v~ 148 (433)
T PRK06855 75 VLETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYSTHSSAE--AAHAGYPPVTYR 148 (433)
T ss_pred CHHHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCchHHHHH--HHhcCCeEEEEe
Confidence 344555565554 4 5677 89999999999999885 5 578999999988887643221 123478888888
Q ss_pred cCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCC
Q 010538 160 VEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPF 239 (508)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~ 239 (508)
++.+... .+|+++++ +++.+ .++++++++++++||||.+++.+++.++++ +|
T Consensus 149 ~~~~~~~-------------~~d~~~l~--~~~~~----~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~---------~a 200 (433)
T PRK06855 149 LDPENNW-------------YPDLDDLE--NKVKY----NPSIAGILLINPDNPTGAVYPKEILREIVD---------IA 200 (433)
T ss_pred cccccCC-------------CCCHHHHH--HHHhc----CCCceEEEEECCCCCCCcCCCHHHHHHHHH---------HH
Confidence 7642221 12678888 55531 246789999999999999999998888876 56
Q ss_pred CCCCeEEEEeccccC----CCCCCCCCCC---CCcEEEEeccccccCCCc--ceEEEEec----h-hHhhhccccccCce
Q 010538 240 SKGRWMVLIDAAKGC----VTQPPDLSKY---PVDFVVMSFYKIFGYPTG--LGALIMRN----D-AAKLLKNTYFSGGT 305 (508)
Q Consensus 240 ~~~g~~vivD~a~~~----g~~~~d~~~~---~~D~~~~S~~K~~g~P~G--~G~l~~~~----~-~~~~l~~~~~g~~~ 305 (508)
+++|++||+|++++. +..+.++... +..+++.|++|.|+.| | +||+++++ . +.+.+.....
T Consensus 201 ~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~p-GlRiG~ii~p~~~~~~~~~~~~~~~~~---- 275 (433)
T PRK06855 201 REYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWP-GSRCGWIEVYNADKDEVFKKYINSILN---- 275 (433)
T ss_pred HHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCC-cceEEEEEEeCCchhhHHHHHHHHHHH----
Confidence 679999999999863 2122232211 1248899999999834 7 89999842 1 1111111100
Q ss_pred EEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q 010538 306 VAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN-SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY 384 (508)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~ 384 (508)
......+ ++.....++..+++.-. +..+++.++++++.++.+.+.|+++ +++.+.
T Consensus 276 -----------------~~~~~~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~------~~~~~~ 331 (433)
T PRK06855 276 -----------------AKMIEVC-STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV------PGLKVN 331 (433)
T ss_pred -----------------hhccccC-CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC------CCeecc
Confidence 0001112 23333344443432100 1125677788888899999999876 356655
Q ss_pred cCCCCCcccCCCCceEEEEeeCCCC-----Cc-------------------cCHHHHHHHHhhCCCeeccCCCCCchHHH
Q 010538 385 GTYTSEVSYHDTGSMVSFNLKRPDG-----SW-------------------FGYREVEKLASLSGIQLRTGCFCNPGACA 440 (508)
Q Consensus 385 ~~~~~~~~~~~~~~~v~~~~~~~~~-----~~-------------------~~~~~l~~~L~~~gI~v~~g~~~~~~~~~ 440 (508)
.|.+ +.++|+++++.-. .. -+...+..++.++||.+.+|..|...
T Consensus 332 ~p~g--------g~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~--- 400 (433)
T PRK06855 332 RTNG--------AFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE--- 400 (433)
T ss_pred CCCe--------eEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC---
Confidence 4543 6889998875210 00 01122445678899999999866321
Q ss_pred hhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 441 KYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 441 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
...+|||+.. .+.++++..++.|+++++
T Consensus 401 -------------------------------~~~~Rls~~~-~~~~~i~~~~~~l~~~~~ 428 (433)
T PRK06855 401 -------------------------------LNGFRVTLLE-RDEEKFEWIYQTLAEKIE 428 (433)
T ss_pred -------------------------------CCceEEEECC-CcHHHHHHHHHHHHHHHH
Confidence 2349999987 468999999999988775
No 174
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=2.5e-21 Score=199.78 Aligned_cols=279 Identities=13% Similarity=0.021 Sum_probs=188.9
Q ss_pred HHHHHHHHHc----C---CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 88 AAREQVLDYF----N---ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 88 ~~r~~la~~~----~---~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
++|+.+++++ | ++++ +|++|+|+++++.++...+...+|+.|+++...|+++....+ ..|+++..++.
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~ 140 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGAR---LAGATVVRADS 140 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHH---hcCCEEEecCC
Confidence 3445555554 4 5577 899999999999998877745789999999888877755443 45888877641
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
.+++. .+++++|++++++||||.+++.+++.++++ +|+
T Consensus 141 ----------------------~~~l~-----------~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~---------~a~ 178 (364)
T PRK07865 141 ----------------------LTELG-----------PQRPALIWLNSPSNPTGRVLGVDHLRKVVA---------WAR 178 (364)
T ss_pred ----------------------hhhCC-----------cccceEEEEcCCCCCCCccCCHHHHHHHHH---------HHH
Confidence 12223 246799999999999999999887776665 455
Q ss_pred CCCeEEEEeccccCCC---CCCCC-C------CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEe
Q 010538 241 KGRWMVLIDAAKGCVT---QPPDL-S------KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAA 308 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~---~~~d~-~------~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~ 308 (508)
++|+++|+|++++.-. .++.. . ..+..+++.|++|.|+.| | +||++.++++++.+......
T Consensus 179 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-GlRiG~i~~~~~~~~~~~~~~~~------ 251 (364)
T PRK07865 179 ERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA-GYRAGFVAGDPALVAELLEVRKH------ 251 (364)
T ss_pred HcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCC-ceeeEEEecCHHHHHHHHHHHHh------
Confidence 5999999999987311 11111 0 112348999999999734 6 89999988887665533100
Q ss_pred cccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCC
Q 010538 309 SIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYT 388 (508)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~ 388 (508)
...+.+.....++..+++. ....+..++++.+.++.+.+.|++. ++.+..+.+
T Consensus 252 ------------------~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~ 304 (364)
T PRK07865 252 ------------------AGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-------GFRVDHSEA 304 (364)
T ss_pred ------------------cCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCc
Confidence 0112233333344444432 1225667788888899999999875 566554432
Q ss_pred CCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccC
Q 010538 389 SEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIH 468 (508)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 468 (508)
+.++++.++. +...+.+.|.++||.+.+|..+...
T Consensus 305 --------~~~~~~~~~~------~~~~~~~~l~~~gv~v~pg~~f~~~------------------------------- 339 (364)
T PRK07865 305 --------GLYLWATRGE------DCWDTVAWLAERGILVAPGDFYGPA------------------------------- 339 (364)
T ss_pred --------cEEEEEeCCC------CHHHHHHHHHHCCEEEeCccccCcC-------------------------------
Confidence 4567776532 1234778888999999998644221
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 469 GKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 469 ~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
.++++||+++. +.+++++.++.|+
T Consensus 340 --~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 340 --GAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred --CCCEEEEEecC--CHHHHHHHHHHhh
Confidence 25789999985 6899999988764
No 175
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=3.5e-22 Score=210.85 Aligned_cols=310 Identities=12% Similarity=0.097 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHcC--------CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEE
Q 010538 86 VRAAREQVLDYFN--------ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFA 157 (508)
Q Consensus 86 ~~~~r~~la~~~~--------~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~ 157 (508)
...+|+++|++++ ++++ +|++|+|+++|+.+++.++ ..+|+.|+++...|+.+...+. .+.|++++.
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l-~~pGD~Vlv~~P~Y~~f~~~~~--~~~g~~vv~ 171 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLR--WRTGVKIVP 171 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcchHHHHH--hcCCcEEEE
Confidence 4556666666654 5677 8999999999999999998 6889999999988887765433 136899999
Q ss_pred EccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccC
Q 010538 158 IDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEIS 237 (508)
Q Consensus 158 v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~ 237 (508)
|+.+....+ ..++++++ +++.+....+.+++++++++++||||.++|.+.+.++++
T Consensus 172 v~~~~~~~f-------------~~~~~~le--~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~--------- 227 (447)
T PLN02607 172 IHCDSSNNF-------------QVTPQALE--AAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILD--------- 227 (447)
T ss_pred EeCCCCCCC-------------cCCHHHHH--HHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHH---------
Confidence 988643222 11577777 555321122457899999999999999999887777776
Q ss_pred CCCCCCeEEEEeccccCCC---C-CCCCC----C------CCCcEEEEeccccccCCCc--ceEEEEe-chhHhhhcccc
Q 010538 238 PFSKGRWMVLIDAAKGCVT---Q-PPDLS----K------YPVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTY 300 (508)
Q Consensus 238 ~~~~~g~~vivD~a~~~g~---~-~~d~~----~------~~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~ 300 (508)
+|+++++++|+|++++.-. . ..++. . .+.-.++.|++|.||.| | +|+++.. ++++..++...
T Consensus 228 ~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~-GlRvG~ivs~n~~l~~~~~~~~ 306 (447)
T PLN02607 228 FVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLP-GFRVGTIYSYNDKVVTTARRMS 306 (447)
T ss_pred HHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCC-cceEEEEEEcCHHHHHHHHHHh
Confidence 5666999999999987421 1 11111 0 11236778999999844 7 8999984 44443332210
Q ss_pred ccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHH---HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCC
Q 010538 301 FSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN---LINSLTVPAICRHIASLGMYVRKVLLSLRHENG 377 (508)
Q Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~---~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~ 377 (508)
..+..+......+...++ +.++ .+...++++.+..+.+.+.|++.
T Consensus 307 --------------------------~~~~~s~~~q~~~~~~L~d~~~~~~-~l~~~r~~l~~~~~~~~~~L~~~----- 354 (447)
T PLN02607 307 --------------------------SFTLVSSQTQHLLASMLSDEEFTEN-YIRTNRERLRKRYEMIVQGLRRA----- 354 (447)
T ss_pred --------------------------hcCCCCHHHHHHHHHHhCCchhHHH-HHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 001112222222332322 1111 24566777888888888899875
Q ss_pred CceEEEecCCCCCcccCCCCceEEEEeeCCC--CCccCHHHHH-HHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhh
Q 010538 378 ADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD--GSWFGYREVE-KLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNI 454 (508)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~-~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~ 454 (508)
++.+..+.+ +.++|++++..- ...-...++. +.++++||.+.+|..|...
T Consensus 355 --gi~~~~~~a--------g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~----------------- 407 (447)
T PLN02607 355 --GIECLKGNA--------GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCS----------------- 407 (447)
T ss_pred --CCCcccCCe--------eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCC-----------------
Confidence 566554433 789999986421 1100112355 4456689999999866432
Q ss_pred hcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 455 EAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.+|++||+++. .++++++..+++|.++++-
T Consensus 408 ----------------~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 408 ----------------EPGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred ----------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 27899999995 3588899999998887753
No 176
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.89 E-value=1e-20 Score=213.06 Aligned_cols=357 Identities=11% Similarity=0.037 Sum_probs=228.5
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCC--CCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChH-HH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGN--PHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGAT-AA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t-~a 115 (508)
...|.|.+ .+....|.+...... . ..|.+ |......+....+++.++.+++++++|.+. +.+.++++ +|
T Consensus 499 ~~~i~lGs-ct~~~~p~~~~~~~~-~--~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d~----~sl~~~~ga~g 570 (954)
T PRK05367 499 RSMIPLGS-CTMKLNAAAEMIPIT-W--PEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYDA----VSLQPNAGAQG 570 (954)
T ss_pred cceeeCCc-CCCcCCHHHHHHHHh-C--ccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCCC----EEECccHHHHH
Confidence 44677887 455556655544332 1 11221 222212234467888899999999999873 45655444 44
Q ss_pred H---HHHHhhcCCCCCC----eEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhc
Q 010538 116 L---KLVGEAFPWSHQS----SYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRK 188 (508)
Q Consensus 116 l---~~~~~~l~~~~g~----~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~ 188 (508)
. .++++.+...+|+ +|+++...|++....+. ..|++++.||.+.++.+ |+++++
T Consensus 571 e~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~---~~G~~vv~v~~d~~G~i---------------D~~~L~- 631 (954)
T PRK05367 571 EYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAV---MAGMKVVVVACDENGNI---------------DLDDLR- 631 (954)
T ss_pred HHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHH---HCCCEEEEECCCCCCCc---------------CHHHHH-
Confidence 3 2345544344444 69999999988766544 45999999999877777 688888
Q ss_pred CCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC-CCCCCCc
Q 010538 189 GASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD-LSKYPVD 267 (508)
Q Consensus 189 ~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d-~~~~~~D 267 (508)
+.++++ .+++.+|+++++++..+...|+++|+++||+ +|++++||+++..+...+. ..++++|
T Consensus 632 -~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~------------~G~~v~VDgA~~~al~~l~~pg~~GAD 695 (954)
T PRK05367 632 -AKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHE------------HGGQVYLDGANMNAQVGLARPGDIGAD 695 (954)
T ss_pred -HHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHH------------cCCEEEEECcChhhccCCCChhhcCCC
Confidence 666431 3467888889887764445899999999998 8999999999986655444 3467999
Q ss_pred EEEEeccccccCCCc-----ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh---HHHHH
Q 010538 268 FVVMSFYKIFGYPTG-----LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL---SIASI 339 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~---~~~~l 339 (508)
++++|+||||+.|.| +|++++++. +.|.+.|+.... ... . ...|+.... +...+
T Consensus 696 i~~~s~HK~f~~P~G~GGPg~G~l~vr~~----l~p~lpg~~v~~-~~~-----------~--~~~g~v~ta~~g~al~~ 757 (954)
T PRK05367 696 VSHLNLHKTFCIPHGGGGPGVGPIGVKAH----LAPFLPGHPVQI-AGG-----------E--TGIGAVSAAPFGSASIL 757 (954)
T ss_pred EEEecCcccCCCCcCCCCCceEEEeeccc----ccccCCCCccCc-CCC-----------C--CCcCcchhHHHHHHHHH
Confidence 999999999865554 779999854 455555542100 000 0 001222211 11222
Q ss_pred ---HHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE-eeCCCCCccCHH
Q 010538 340 ---RHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN-LKRPDGSWFGYR 415 (508)
Q Consensus 340 ---~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~ 415 (508)
+..+.++...|+.++.++...+++|+.+.|++.. .+...++.... -+..++.++ ++.. ..+...
T Consensus 758 ~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~------~~~~~~~~~~~----~~e~i~~~~~~~~~--~g~~~~ 825 (954)
T PRK05367 758 PISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHY------PVLYTGANGRV----AHECILDLRPLKES--TGITVD 825 (954)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhc------CccccCCCCCc----ccceEEEeeccccc--CCCCHH
Confidence 2233444444566666667799999999997752 23333332211 123343332 2211 113456
Q ss_pred HHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 416 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 416 ~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
++.+.|.+.|+....-. + + ..+.+||+++.++|.+|+|+++++|
T Consensus 826 di~krL~d~G~~~~t~~-~-p----------------------------------v~~~l~i~ptE~~s~~elDr~~~al 869 (954)
T PRK05367 826 DIAKRLIDYGFHAPTMS-F-P----------------------------------VAGTLMVEPTESESKAELDRFCDAM 869 (954)
T ss_pred HHHHHHHHCCCeEeecC-C-c----------------------------------cCCEEEEEeeecCCHHHHHHHHHHH
Confidence 79999999999976521 1 1 1578999999999999999999999
Q ss_pred hhhhhhhhh
Q 010538 496 FDFVNFSQF 504 (508)
Q Consensus 496 ~~~~~~~~~ 504 (508)
+.+.+.++.
T Consensus 870 ~~i~~e~~~ 878 (954)
T PRK05367 870 IAIRAEIDE 878 (954)
T ss_pred HHHHHHHHH
Confidence 998877654
No 177
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=1.5e-21 Score=202.80 Aligned_cols=315 Identities=12% Similarity=0.053 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHH-HHHHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLG-IREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v~~v~~~~ 162 (508)
...+++++.+|+++|++.. +++ ++++.|+.+++.++ .++|++|+++...|++... +...+...|+++..++.+
T Consensus 63 p~~~~le~~lA~l~g~~~a---v~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 136 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAEDA---RGF-ASGMAAISSTVLSF-VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR- 136 (389)
T ss_pred hhHHHHHHHHHHHhCCCcE---EEE-CCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-
Confidence 4478899999999999744 565 55567998888887 6889999999888876554 344667789999988753
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ ++|++|++++++|+++.+.|+++|.++|++ +
T Consensus 137 -------------------d~~~l~--~~i-------~~tklV~ie~pt~~~~~~~dl~~i~~la~~------------~ 176 (389)
T PRK05968 137 -------------------DEEAVA--KAL-------PGAKLLYLESPTSWVFELQDVAALAALAKR------------H 176 (389)
T ss_pred -------------------CHHHHH--Hhc-------ccCCEEEEECCCCCCCcHHHHHHHHHHHHH------------c
Confidence 356677 433 467999999999999999999999999997 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
|+++++|++++.+.....+ ..++|+++.|++|++++|.+ .|+++.+++++++++.....
T Consensus 177 gi~vivD~a~a~~~~~~p~-~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~------------------ 237 (389)
T PRK05968 177 GVVTMIDNSWASPVFQRPI-TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYP------------------ 237 (389)
T ss_pred CCEEEEECCCcchhccCch-hcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHH------------------
Confidence 9999999999876432222 35789999999999987755 58888788777665532110
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcc----cCCC
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVS----YHDT 396 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~----~~~~ 396 (508)
...+..+....+.+..+++ .+..+.++..+.++++.+.|++.+ +++.+..+..... ....
T Consensus 238 -----~~g~~~~~~~A~~~l~~L~-----tl~~r~~~~~~~a~~la~~L~~~p------~v~~v~~p~l~~~~~~~~~g~ 301 (389)
T PRK05968 238 -----YLGAKLSPFEAWLLLRGLR-----TLPLRMKAHEASALEIARRLKAHP------VVERVCHPALANHPPAGLSGT 301 (389)
T ss_pred -----hCCCCCChHHHHHHHcccC-----cHHHHHHHHHHHHHHHHHHHHhCC------CccEEECCCCCCChHHhCCCC
Confidence 0011222222222222322 346666777788999999998874 5654442211000 0012
Q ss_pred CceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchH--HHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 397 GSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGA--CAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 397 ~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
+++++|.+++. .+..++...|+..++.++.|..|+.-. ..-.-.+.+....+.+| ..++.
T Consensus 302 g~~~sf~~~~~----~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~g--------------i~~~l 363 (389)
T PRK05968 302 SGLFSFIFREG----IDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFG--------------VSPRS 363 (389)
T ss_pred ceEEEEEECCH----HHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcC--------------CCCCe
Confidence 67999999742 234568888888899999998877210 00000000011111222 23789
Q ss_pred EEEecCCCCCHHHHHHHHHhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~ 497 (508)
||+|+++.++++=++.+-++|..
T Consensus 364 iR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 364 VRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred EEEEeccCCHHHHHHHHHHHHHH
Confidence 99999999988888877777653
No 178
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.89 E-value=5.1e-21 Score=199.36 Aligned_cols=322 Identities=14% Similarity=0.080 Sum_probs=224.8
Q ss_pred CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcC--------
Q 010538 53 SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFP-------- 124 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~-------- 124 (508)
+|.++++..+.... |+........-.......+++++.+|+++|.+.. ++|.+|.. |+..++.++.
T Consensus 118 ~p~v~~a~~~ai~~--yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~a---ll~sSGy~-AN~~~i~aL~~~~~~~~~ 191 (476)
T PLN02955 118 HPTISNAAANAAKE--YGMGPKGSALICGYTTYHRLLESSLADLKKKEDC---LVCPTGFA-ANMAAMVAIGSVASLLAA 191 (476)
T ss_pred CHHHHHHHHHHHHH--cCCCCCCcCccccChHHHHHHHHHHHHHHCCCcE---EEECChHH-HHHHHHHHHhhccccccc
Confidence 67777777665432 3322112222223456788999999999999865 56555554 6666666551
Q ss_pred -----CCCCCeEEEecccccchHHHHHHHHhc-CCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 125 -----WSHQSSYMYTMENHNSVLGIREYALSQ-GAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 125 -----~~~g~~vl~~~~~h~s~~~~~~~~~~~-G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
...++.|++....|.|+....++.+.. ++++..++.++ ++.++ +.|++ .
T Consensus 192 ~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND--------------------~~~Le--~~L~~---~ 246 (476)
T PLN02955 192 SGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCD--------------------MYHLN--SLLSS---C 246 (476)
T ss_pred cccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCC--------------------HHHHH--HHHHh---C
Confidence 234568899999999999888876554 47777777542 44445 44422 1
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC---------CCCCCCCcEE
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP---------DLSKYPVDFV 269 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~---------d~~~~~~D~~ 269 (508)
.++.++|++..+.++.|.+.|+++|.+++++ +|+++++|++|+.|..-. .+. .++|++
T Consensus 247 ~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~------------~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii 313 (476)
T PLN02955 247 KMKRKVVVTDSLFSMDGDFAPMEELSQLRKK------------YGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLC 313 (476)
T ss_pred CCCceEEEEeCCCCCCCCcCCHHHHHHHHHH------------cCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEE
Confidence 2345789999999999999999999999997 899999999999765433 222 368999
Q ss_pred EEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccccc-CCCCChhHHHHHHHHHHHHHh
Q 010538 270 VMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE-DGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 270 ~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~ 348 (508)
++|+.|.+| -.| |++..+++.++.++.. .+.+. ++..+++..++..++++.+.+
T Consensus 314 ~~TLsKA~G-~~G-Gfi~gs~~~~~~l~~~-----------------------~~~~ifStalpp~~aaa~laal~l~~~ 368 (476)
T PLN02955 314 VGTLSKAAG-CHG-GFIACSKKWKQLIQSR-----------------------GRSFIFSTAIPVPMAAAAYAAVVVARK 368 (476)
T ss_pred EEeCccchh-ccC-ceeecHHHHHHHHHHh-----------------------CCCCeecccccHHHHHHHHHHHHHHhc
Confidence 999999999 445 8888888777665532 11111 223445556666778887754
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
. ...++++.++.+++++.+ |+.+ . ++|+.+.+.+... ...+.+.|.++||.+
T Consensus 369 ~--~~~r~~L~~n~~~fr~~~----------G~~~----~--------sPI~pI~ig~~~~----a~~~~~~L~~~Gi~v 420 (476)
T PLN02955 369 E--KWRRKAIWERVKEFKALS----------GVDI----S--------SPIISLVVGNQEK----ALKASRYLLKSGFHV 420 (476)
T ss_pred C--HHHHHHHHHHHHHHHHhc----------CCCC----C--------CCEEEEEeCCHHH----HHHHHHHHHHCCCEE
Confidence 3 457788888888888732 2321 1 6888888865322 234789999999999
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
.+...++.|. ....+||+++..+|.+||+++++.|.+..+.++
T Consensus 421 ~~i~yPtVP~--------------------------------g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 421 MAIRPPTVPP--------------------------------NSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred EEECCCCCCC--------------------------------CCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 9877666553 246799999999999999999999988766543
No 179
>PLN02231 alanine transaminase
Probab=99.89 E-value=4.9e-21 Score=205.70 Aligned_cols=364 Identities=12% Similarity=0.062 Sum_probs=223.2
Q ss_pred hHHHHHHhhccCC-CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHc----C--
Q 010538 26 IDQIRATEFKRLE-NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYF----N-- 98 (508)
Q Consensus 26 ~~~~r~~~f~~~~-~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~-- 98 (508)
...+|+ -..... ++.+-|.. +....|..+++++.+ .+....+.....|.. ......+|+.+|+++ |
T Consensus 116 ~~~~r~-v~~~~~~p~~i~~~~-~~~~fp~~~i~~a~~-~l~~~~~~~~~~Y~~----s~G~~~lReaIA~~~~~r~g~~ 188 (534)
T PLN02231 116 ITFFRE-VLALCDHPSLLDKSE-THGLFSADAIERAWQ-ILDQIPGRATGAYSH----SQGIKGLRDAIAAGIEARDGFP 188 (534)
T ss_pred cHHHHH-HHHhccCCccCCCCC-ccccCCHHHHHHHHH-HHHhcCCccccCcCC----CCCcHHHHHHHHHHHHhccCCC
Confidence 445555 443332 44555543 344456677776654 332211111112322 223455666666655 4
Q ss_pred CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccc
Q 010538 99 ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTK 178 (508)
Q Consensus 99 ~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~ 178 (508)
++++ +|++|+|+++|+.+++.++...+|+.|+++...|+.+.... +..|.+++.++++.+..+
T Consensus 189 ~~pe--~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~---~~~g~~~v~~~l~~~~~~------------ 251 (534)
T PLN02231 189 ADPN--DIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGW------------ 251 (534)
T ss_pred CCcc--cEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHH---HHcCCEEEEEecCcccCC------------
Confidence 4677 89999999999999999984457899999987777665554 446899999998753222
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC---
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV--- 255 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g--- 255 (508)
.+|+++++ +++++......+++++++++++||||.+++.+++.++++ +|+++|++||+|+++..-
T Consensus 252 -~~d~~~Le--~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~---------~a~~~~l~lI~DEvY~~l~y~ 319 (534)
T PLN02231 252 -GLEISELK--KQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVE---------FCKQEGLVLLADEVYQENVYV 319 (534)
T ss_pred -CCCHHHHH--HHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHH---------HHHHcCCEEEEEccchhcccC
Confidence 12677887 555321112236899999999999999999998888877 677799999999997631
Q ss_pred --CCCCCCCCC---------CC-cEEEEeccccc-cCCCc--ceEEEE---echhHhhhccccccCceEEecccchhhhh
Q 010538 256 --TQPPDLSKY---------PV-DFVVMSFYKIF-GYPTG--LGALIM---RNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 256 --~~~~d~~~~---------~~-D~~~~S~~K~~-g~P~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
....++.+. +. -+++.|++|.+ | .+| +||+++ ++++++.+....
T Consensus 320 ~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g-~pGlRiGy~~~~~~~~~l~~~l~k~~----------------- 381 (534)
T PLN02231 320 PDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG-ECGKRGGYMEVTGFTSDVREQIYKVA----------------- 381 (534)
T ss_pred CCCCcccHHHHHhhhccccCCceEEEEeccCccccc-CCccceEEEEEecCCHHHHHHHHHHH-----------------
Confidence 122222211 11 25677999955 5 446 899987 466665554321
Q ss_pred hccCccccccCCCCChhHHHHHHHHHH-------HHHhc--ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFN-------LINSL--TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYT 388 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~-------~~~~~--g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~ 388 (508)
. ... ..+..+.+++..+++ .+.+. ..+.+.+.+.+.++++.+.|+++ +++.+..|.+
T Consensus 382 ------~-~~~-~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~------~gi~~~~p~G 447 (534)
T PLN02231 382 ------S-VNL-CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL------EGVTCNKAEG 447 (534)
T ss_pred ------h-hhc-CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCceecCCCe
Confidence 0 111 223333333333331 11110 13456778889999999999887 3688776654
Q ss_pred CCcccCCCCceEEEEe--eCC--CCCc---c-CHHHH-HHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCc
Q 010538 389 SEVSYHDTGSMVSFNL--KRP--DGSW---F-GYREV-EKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHV 459 (508)
Q Consensus 389 ~~~~~~~~~~~v~~~~--~~~--~~~~---~-~~~~l-~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 459 (508)
+.++|.++ +.. +..+ . ....+ .++|++.||.+.+|..|....
T Consensus 448 --------gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~--------------------- 498 (534)
T PLN02231 448 --------AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVP--------------------- 498 (534)
T ss_pred --------eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCC---------------------
Confidence 56666444 211 0000 0 01113 345678899999998664311
Q ss_pred cCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 460 CWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 460 ~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
....+|+++. .+.++++..++.|.+|+
T Consensus 499 -----------g~~~~Rit~~--~~~e~l~eal~RL~~~~ 525 (534)
T PLN02231 499 -----------GTWHFRCTIL--PQEDKIPAIVSRLTEFH 525 (534)
T ss_pred -----------CCCeEEEEeC--CCHHHHHHHHHHHHHHH
Confidence 1457999985 68899888888888765
No 180
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=1.4e-21 Score=202.19 Aligned_cols=265 Identities=14% Similarity=0.074 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+++++.+++++|++ .++++++++.|+++++. + +++|++|+++...|+++...+ ..+...|++++.++..
T Consensus 47 p~~~~le~~la~l~g~~----~~l~~~sG~~al~~~l~-l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~- 119 (378)
T TIGR01329 47 PTRTALESLLAKLDKAD----RAFAFSSGMAALDVITR-L-LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT- 119 (378)
T ss_pred hHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHH-H-hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC-
Confidence 34678999999999994 34445555669988776 4 588999999988888776543 3466789999999863
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++||+ +
T Consensus 120 -------------------d~~~le--~~i------~~~tklv~le~psnptg~v~dl~~I~~la~~------------~ 160 (378)
T TIGR01329 120 -------------------DLDKVK--AAL------GPKTKLVLLESPTNPLQKIVDIRKISEMAHA------------Q 160 (378)
T ss_pred -------------------CHHHHH--Hhc------CcCceEEEEECCCCCCCeeecHHHHHHHHHH------------c
Confidence 366777 444 4789999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechh-HhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDA-AKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.+.....+ .+++|++++|+||++++|.+ .|+++++++. .+++.+.....
T Consensus 161 g~~vivD~a~~~~~~~~~l-~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~---------------- 223 (378)
T TIGR01329 161 NALVVVDNTMMSPLLCNPL-ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNST---------------- 223 (378)
T ss_pred CCEEEEECCCcccccCChh-hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhc----------------
Confidence 9999999999877654444 45899999999998887876 7888886654 34454432111
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccC--------CCCCceEEEecCCCCCc
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRH--------ENGADVCTIYGTYTSEV 391 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~--------~~~~~~~~~~~~~~~~~ 391 (508)
.+..+....+.+...+ ..+..+.++..+.+..+.+.|++.+. ....|+.+++.+..
T Consensus 224 --------G~~~~~~~a~l~~~~l-----~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~--- 287 (378)
T TIGR01329 224 --------GSGLAPFDCWLLLRGI-----KTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQA--- 287 (378)
T ss_pred --------CCcCCHHHHHHHHccC-----CCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhC---
Confidence 0111111111111111 13555666667777777777766531 01122223332221
Q ss_pred ccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCC
Q 010538 392 SYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCF 433 (508)
Q Consensus 392 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~ 433 (508)
...+++++|.+.+.+ ...++...|+..+|.++.|..
T Consensus 288 --~g~~~~~sf~~~~~~----~~~~~~~~L~~~~i~~s~G~~ 323 (378)
T TIGR01329 288 --KGAGSVLSFETGSVA----LSKRLVEATKLFSITVSFGSV 323 (378)
T ss_pred --CCcceEEEEEECCHH----HHHHHHHhCcCcccccCCCCC
Confidence 124789999994321 134578888888999998853
No 181
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.89 E-value=1.9e-20 Score=194.90 Aligned_cols=348 Identities=11% Similarity=0.058 Sum_probs=219.1
Q ss_pred CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEE
Q 010538 53 SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYM 132 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl 132 (508)
+|.+.+++.+.......+...+... +.......++++++|+++|.+. .++|++|.+... .++.++ .++||+|+
T Consensus 14 ~~~~~~~~~~a~~~~g~~~~~sr~~--yg~~~~~~~LE~~lA~~~g~e~---al~~~sG~~a~~-~~i~~l-~~~GD~Vl 86 (392)
T PLN03227 14 SPTLRQTALESLSHYGCGSCGPRGF--YGTIDAHLELEQCMAEFLGTES---AILYSDGASTTS-STVAAF-AKRGDLLV 86 (392)
T ss_pred CHHHHHHHHHHHHHhCCCCcccccc--cCChHHHHHHHHHHHHHhCCCc---EEEecCcHHHHH-HHHHHh-CCCCCEEE
Confidence 6677777666543211111112211 2234478899999999999974 588888877555 666666 78999999
Q ss_pred EecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC-----CCCCCCceEEEE
Q 010538 133 YTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER-----DPAGDAYNLFAF 207 (508)
Q Consensus 133 ~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~-----~~~~~~t~lv~~ 207 (508)
+++..|+++...+.. .+.+++.++..+..++ +.+. +.++.. ....+++++|++
T Consensus 87 ~~~~~h~s~~~~~~l---~~~~~~~~~~~d~~~l-----------------~~~~--~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 87 VDRGVNEALLVGVSL---SRANVRWFRHNDMKDL-----------------RRVL--EQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred EeccccHHHHHHHHH---cCCeEEEeCCCCHHHH-----------------HHHH--HHhhhhccccccccCCCcEEEEE
Confidence 999999988665433 3567777766432212 2222 122100 001357899999
Q ss_pred eCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC---------CCC-CCCCcEEEEeccccc
Q 010538 208 PSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP---------DLS-KYPVDFVVMSFYKIF 277 (508)
Q Consensus 208 ~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~---------d~~-~~~~D~~~~S~~K~~ 277 (508)
..+.|++|.+.|++++.++|++ +|+++++|++|++|..-- ++. ..++|+++.|++|.+
T Consensus 145 E~v~~~~G~i~~l~~i~~l~~~------------~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~ 212 (392)
T PLN03227 145 EGLYKNTGTLAPLKELVALKEE------------FHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF 212 (392)
T ss_pred cCCcCCCCcccCHHHHHHHHHH------------cCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh
Confidence 9999999999999999999998 999999999998654311 121 236799999999998
Q ss_pred cCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHH
Q 010538 278 GYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRH 357 (508)
Q Consensus 278 g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~ 357 (508)
| |.| |++..+++.++.++.. +. ...+ .++.+....++..+++..+.+ .+++.++
T Consensus 213 g-~~g-g~v~~~~~~~~~~~~~--~~-------------------~~~~-~~~~~p~~~~aa~~al~~~~~--~~~~~~~ 266 (392)
T PLN03227 213 G-SVG-GMTVGSEEVVDHQRLS--GS-------------------GYCF-SASAPPFLAKADATATAGELA--GPQLLNR 266 (392)
T ss_pred h-ccC-cEEecCHHHHHHHHHh--Cc-------------------Cccc-cCCCCHHHHHHHHHHHHHHhc--CHHHHHH
Confidence 8 765 7788888776554422 11 0111 222233233334345544333 3677889
Q ss_pred HHHHHHHHHHHHhcccCCC--CCc-eEEEecCCCCCcccCCCCceEEEEeeCCCCCc-c----CHHHHHHHHhhCCCeec
Q 010538 358 IASLGMYVRKVLLSLRHEN--GAD-VCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW-F----GYREVEKLASLSGIQLR 429 (508)
Q Consensus 358 ~~~l~~~l~~~L~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~----~~~~l~~~L~~~gI~v~ 429 (508)
++++.++|++.|++...+. ..+ +..+... ..++++.+.+.+.+... + -...+.+.+.++|+.+.
T Consensus 267 l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~--------~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ 338 (392)
T PLN03227 267 LHDSIANLYSTLTNSSHPYALKLRNRLVITSD--------PISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVV 338 (392)
T ss_pred HHHHHHHHHHHHHhcCCccccccccccccCCC--------CCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEE
Confidence 9999999999997632100 000 1111111 13788989885421100 0 01357888889999986
Q ss_pred cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 430 TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 430 ~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
+...+.... ....++..+|++++..+|+|||+++++.+++.++-++
T Consensus 339 ~~~~~~~~~----------------------------~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 339 STGGHVKKF----------------------------LQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred ecccccCCc----------------------------CCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 421110000 0012357899999999999999999999998876554
No 182
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.89 E-value=9.9e-22 Score=195.25 Aligned_cols=322 Identities=13% Similarity=0.101 Sum_probs=221.1
Q ss_pred eeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC--CCCCceEEEcCChHHHHHHHHh
Q 010538 44 LDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA--SMKDYKCIFTSGATAALKLVGE 121 (508)
Q Consensus 44 ld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~~i~~t~g~t~al~~~~~ 121 (508)
|..+-...++|.++...+.....+. ...+|..++...++...+++++++++|. .+++ +|++|.|+.+++..++.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~---~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~-eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEP---STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDD-EVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccc---hhccccccCCchHHHHHHHHHHHHHhccccCCcc-cEEEecCchHHHHHHHH
Confidence 7777766666665544444443321 1345667777889999999999998885 3332 79999999999999998
Q ss_pred hcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCCCCCCCCCCC
Q 010538 122 AFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGD 200 (508)
Q Consensus 122 ~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~ 200 (508)
++ ..+||+|++.+.-++++.....++ |.+++.||... .+.. -...-.+|.+.++ ...++
T Consensus 112 ~l-~~~GDeVii~eP~fd~Y~~~~~ma---G~tpv~v~~~~~~g~~--------~s~~~~~D~~~le--------~~~t~ 171 (420)
T KOG0257|consen 112 GL-LNPGDEVIVFEPFFDCYIPQVVMA---GGTPVFVPLKPKEGNV--------SSSDWTLDPEELE--------SKITE 171 (420)
T ss_pred HH-cCCCCEEEEecCcchhhhhHHhhc---CCcceeeccccccccc--------cCccccCChHHHH--------hhccC
Confidence 88 788999999998888888887776 88888888762 1111 0112244889999 44578
Q ss_pred CceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCCCCCCC----CCCCcEEEEe
Q 010538 201 AYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQPPDLS----KYPVDFVVMS 272 (508)
Q Consensus 201 ~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~~~d~~----~~~~D~~~~S 272 (508)
+|++|++++++||||.+++-+++..+++ +|++||++||.|.++.. |...+.+. .+...+-++|
T Consensus 172 kTk~Ii~ntPhNPtGkvfsReeLe~ia~---------l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS 242 (420)
T KOG0257|consen 172 KTKAIILNTPHNPTGKVFSREELERIAE---------LCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGS 242 (420)
T ss_pred CccEEEEeCCCCCcCcccCHHHHHHHHH---------HHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEecc
Confidence 9999999999999999999998888887 78889999999999753 32112221 2246788999
Q ss_pred ccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHH--HH-H
Q 010538 273 FYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN--LI-N 347 (508)
Q Consensus 273 ~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~--~~-~ 347 (508)
+.|+|| .+| +||++.++.+...+++.-. ...+...| +...+..+|+. +- .
T Consensus 243 ~gKtf~-~TGWrlGW~igp~~L~~~~~~vh~---------------------~~~~~~~T---p~q~A~a~a~~~~~~~~ 297 (420)
T KOG0257|consen 243 FGKTFG-VTGWRLGWAIGPKHLYSALFPVHQ---------------------NFVFTCPT---PIQEASAAAFALELACL 297 (420)
T ss_pred ccceee-eeeeeeeeeechHHhhhhHHHHhh---------------------ccccccCc---HHHHHHHHHHhhhhhcc
Confidence 999999 889 9999997777655554411 11111222 22223333333 21 1
Q ss_pred -hc--C-hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC----Ccc-----CH
Q 010538 348 -SL--T-VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG----SWF-----GY 414 (508)
Q Consensus 348 -~~--g-~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~-----~~ 414 (508)
-. . +..+.+.+++.++.|.+.|.++ |+++..|.+ +.+++.+++.... .+. +.
T Consensus 298 ~p~~~y~~~~~~~~y~~krdil~k~L~~l-------g~~v~~p~g--------ayyl~adfs~~~~~~~~~~~~~~~~d~ 362 (420)
T KOG0257|consen 298 QPGGSYFITELVKEYKEKRDILAKALEEL-------GLKVTGPEG--------AYYLWADFSLAKSWPFFEEILEKPDDF 362 (420)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhc-------CCccccCCC--------ceEEEEeccccccCCcchhhccCCCce
Confidence 11 1 3447889999999999999998 799988876 7888888772110 000 11
Q ss_pred HHHHHHHhhCCCeeccCCCCCchH
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGA 438 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~ 438 (508)
....-.+++.|+.+-+++.+..+.
T Consensus 363 ~~~~wl~~~~Gv~~IP~saF~s~~ 386 (420)
T KOG0257|consen 363 KFVRWLIKEGGVVVIPPSAFGSRE 386 (420)
T ss_pred eeehhhhccCcEEEeCchhcCCch
Confidence 112234466788887777665543
No 183
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.89 E-value=6.3e-21 Score=194.90 Aligned_cols=322 Identities=15% Similarity=0.075 Sum_probs=210.5
Q ss_pred chHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCc
Q 010538 25 SIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDY 104 (508)
Q Consensus 25 ~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~ 104 (508)
-|+-||+ ....=..+. --||-+.+. +|.+.++..+.. .. |+ ......+++++.+|+++|.+++
T Consensus 10 ~~~~~~~-~~~~~~~~~-~~~ylgl~~-~~~~~~~~~~~~-~~-~~----------g~~~~~~~Le~~lA~~~g~~~e-- 72 (346)
T TIGR03576 10 ALEIIRE-KISRGGRDS-LYDLTGLAG-GFKIDEEDLELL-ET-YV----------GPAIFEEKVQELGREHLGGPEE-- 72 (346)
T ss_pred HHHHHHH-HHhccCCcc-ccccccCCC-ChhHHHHHHHHH-HH-hc----------CCHHHHHHHHHHHHHHcCCCcc--
Confidence 4677777 433211111 224455554 667777765543 22 21 1246788999999999999888
Q ss_pred eEEEcCChHHHHHHHHhhcCCCCCCeEEEe---cccccchHHHHHHHHhcCCeEEEEccCCccCcccccccccccccccc
Q 010538 105 KCIFTSGATAALKLVGEAFPWSHQSSYMYT---MENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 105 ~i~~t~g~t~al~~~~~~l~~~~g~~vl~~---~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~ 181 (508)
++++++|+++|+..++.++ .++|++|+++ ...|+++....+ ..|+++... .
T Consensus 73 ~ilv~~gg~~a~~~~~~al-~~~gd~Vli~~~d~p~~~s~~~~~~---l~ga~~~~~--~-------------------- 126 (346)
T TIGR03576 73 KILVFNRTSSAILATILAL-EPPGRKVVHYLPEKPAHPSIPRSCK---LAGAEYFES--D-------------------- 126 (346)
T ss_pred eEEEECCHHHHHHHHHHHh-CCCCCEEEECCCCCCCchhHHHHHH---HcCCEEecc--C--------------------
Confidence 8999999999999999999 5788988865 346666655444 447765322 1
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC---HHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN---LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP 258 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~ 258 (508)
+++.++ . .+++++|+++. .+++|.+++ +++|.++|++ +|+++++|++|+.+...
T Consensus 127 ~l~~l~--------~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~------------~~~~livDEAy~~~~~~ 183 (346)
T TIGR03576 127 ELSELK--------K--IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKS------------KEAIVLVDDASGARVRR 183 (346)
T ss_pred CHHHHh--------h--CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHH------------cCCEEEEECCccccccc
Confidence 122233 1 13568888765 689999965 5555555665 89999999999876432
Q ss_pred C----CCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 259 P----DLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 259 ~----d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
. .....+.|+++.|++|+++|+. .|++++++++++.+..... .+.. +.+.+
T Consensus 184 ~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~-----------------------~~~~-s~~~~ 238 (346)
T TIGR03576 184 LYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGE-----------------------QFGL-EAQAP 238 (346)
T ss_pred cCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhc-----------------------Cccc-CccHH
Confidence 1 1223357999999999875476 5999999998877765411 1111 23444
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
.+++..++++.+ ..+.+++.+.+..+++.+.++.+ .+. +.. .++++++++..+. .
T Consensus 239 ~~~aa~~aL~~~---~~~~~~~~l~~r~~~~~~~l~~~---------~~~-~~~--------~~f~~~~~~~~~~----~ 293 (346)
T TIGR03576 239 LLAAVVRALEEF---ELSRIRDAFKRKEEVYLRLFDKL---------NVE-RTP--------TGFVIKGVEEEKL----I 293 (346)
T ss_pred HHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhC---------CCC-cCC--------CeEEEEeCCCCCH----H
Confidence 566666677642 24566677777777777777643 222 222 5678887754211 1
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH----HHHH
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE----DAKV 490 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e----ev~~ 490 (508)
..+.++|+++||.++++..+. + .++++|||++ +.+ |+++
T Consensus 294 ~~~~~ll~~~gV~v~~~~~f~-~---------------------------------~~~~vRis~~---~~~~~~~~~~~ 336 (346)
T TIGR03576 294 EIGLDLLRNYGIITITAVGMP-G---------------------------------ASKTLRFDLA---AKDAERIGDDY 336 (346)
T ss_pred HHHHHHHHhCCEEEeCCcccC-C---------------------------------CCCeEEEEEe---cChHHhcCHHH
Confidence 247788899999999875431 1 1579999999 444 7999
Q ss_pred HHHhhhhhh
Q 010538 491 NRCSSFDFV 499 (508)
Q Consensus 491 l~~~~~~~~ 499 (508)
++++|++-+
T Consensus 337 ~~~al~~~~ 345 (346)
T TIGR03576 337 LVEAVKDSL 345 (346)
T ss_pred HHHHHHhcc
Confidence 999987643
No 184
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=1.2e-20 Score=196.49 Aligned_cols=353 Identities=12% Similarity=0.026 Sum_probs=216.0
Q ss_pred hhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 33 EFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 33 ~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
.|+.. ...||++++...+.+..+ .+. +... +. .+..++......+++++.+|+++|+++. ++ ++++
T Consensus 24 ~~~~~-~~pi~~~~~~~~~~~~~~-~~~---~~~~----~~-~~~y~r~~~p~~~~Le~~lA~l~G~~~~---~~-~~sG 89 (398)
T PRK07504 24 QFGET-SEALFLTQGFVYDTAEAA-EAR---FKGE----DP-GFIYSRYSNPTVDMFEKRMCALEGAEDA---RA-TASG 89 (398)
T ss_pred CCCCC-cCCeECCCCccCCCHHHH-HHH---hccC----cC-CceeecCCCchHHHHHHHHHHHhCCCee---eE-ecCH
Confidence 57666 678999998877643333 221 1111 11 1111111123467889999999999866 34 5677
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 113 TAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 113 t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+.|+..++.++ +++|++|+++...|+++.... ..+...|++++.++. . |+++++ ++
T Consensus 90 ~~Ai~~~l~~~-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~---------------d~e~l~--~a 146 (398)
T PRK07504 90 MAAVTAAILCQ-VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG-----L---------------DLDNWE--KA 146 (398)
T ss_pred HHHHHHHHHHH-hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----C---------------CHHHHH--Hh
Confidence 78888777766 688999999998888765543 345667999988852 2 467788 54
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEE
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVM 271 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~ 271 (508)
+ +++|++|++++++||+|.+.|+++|.++|++ +|+++++|++++.+..... .+.++|+++.
T Consensus 147 i------~~~tklV~lesp~NptG~v~dl~~I~~la~~------------~gi~lvvD~a~a~~~~~~~-~~~gaDivv~ 207 (398)
T PRK07504 147 V------RPNTKVFFLESPTNPTLEVIDIAAVAKIANQ------------AGAKLVVDNVFATPLFQKP-LELGAHIVVY 207 (398)
T ss_pred c------CcCceEEEEECCCCCCcEecCHHHHHHHHHH------------cCCEEEEECCccccccCCc-hhhCCCEEEe
Confidence 4 5689999999999999999999999999998 8999999999987654322 3458999999
Q ss_pred eccccccCCC-cc-eEEEEechhHhh-hccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 272 SFYKIFGYPT-GL-GALIMRNDAAKL-LKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 272 S~~K~~g~P~-G~-G~l~~~~~~~~~-l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
|+||+++++. .+ |+++.+++.+.+ ++... +.....++....+.+..+++.
T Consensus 208 S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~------------------------~~~g~~~s~~~A~~~l~~L~t--- 260 (398)
T PRK07504 208 SATKHIDGQGRCLGGVVLSDKAWIEEHLQDYF------------------------RHTGPSLSPFNAWTLLKGLET--- 260 (398)
T ss_pred eccccccCCccceEEEEEeCcHHHHHHHHHHH------------------------HHhCCCCCHHHHHHHHhccch---
Confidence 9999998553 15 455566655432 21110 001112333333333334443
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcccC---------CCCceEEEEeeCCCCCccCHHHHH
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSYH---------DTGSMVSFNLKRPDGSWFGYREVE 418 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~l~ 418 (508)
+..+.++..+++.++.+.|++.+ ++ +++-|.-. ..+. .-+++++|.+++. .. ....+.
T Consensus 261 --l~~R~~~~~~na~~la~~L~~~p------~v~~v~yp~l~-~~~~~~~~~~~~~g~g~~~s~~~~~~-~~--~~~~~~ 328 (398)
T PRK07504 261 --LPVRVRQQTESAAAIADFLAGHP------KVARVIYPGRA-DHPQADIIAKQMTGGSTLVAFELKGG-KE--AAFRFL 328 (398)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCC------CccEEECCCCC-CCccHHHHHHhCCCCccEEEEEeCCC-HH--HHHHHH
Confidence 45566667788888889998763 44 34333211 0000 1278999999642 11 112345
Q ss_pred HHHhhCCCeeccCCCCCchHHHhhcCCChhhh----hhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 419 KLASLSGIQLRTGCFCNPGACAKYLGLSHSDL----LSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 419 ~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~----~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
+.|+--++.++-|...+.-. ++.. -.++.+ .+.+| ..++.||+|++.-+.++=++.+.++
T Consensus 329 ~~l~~~~~~~slG~~~sl~~-~p~~-~~~~~~~~~~~~~~g--------------i~~~liR~svGlE~~~dl~~dl~~a 392 (398)
T PRK07504 329 NALKIVRISNNLGDAKSLIT-HPAT-TTHKNLSPEARAELG--------------ISEGFLRLSAGLEDTDDLIEDLAAA 392 (398)
T ss_pred HhCCcceecccCCCCCeeee-CCCC-CCcccCCHHHHHhcC--------------CCCCeEEEEeccCCHHHHHHHHHHH
Confidence 55554455555553322110 0000 001111 11232 3478999999986655555555555
Q ss_pred hh
Q 010538 495 SF 496 (508)
Q Consensus 495 ~~ 496 (508)
|.
T Consensus 393 l~ 394 (398)
T PRK07504 393 LK 394 (398)
T ss_pred HH
Confidence 54
No 185
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.88 E-value=4e-21 Score=211.54 Aligned_cols=326 Identities=11% Similarity=-0.016 Sum_probs=224.2
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCceEEEcC-ChHHHHHHHHhhcCC-------CCCCeEEEecccccchHHHHHHHHh
Q 010538 79 SLATCDIVRAAREQVLDYFNASMKDYKCIFTS-GATAALKLVGEAFPW-------SHQSSYMYTMENHNSVLGIREYALS 150 (508)
Q Consensus 79 ~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~-g~t~al~~~~~~l~~-------~~g~~vl~~~~~h~s~~~~~~~~~~ 150 (508)
+....+.+.+..+++++++|.+.. .+-+ +++.|...++.++.. ..+++||++..+|.+.... +..
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~----Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas---a~~ 610 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAI----CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS---AQM 610 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeE----eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH---HHH
Confidence 445678888999999999999854 4444 445455344444321 2357889999999766544 444
Q ss_pred cCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCC
Q 010538 151 QGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNP 230 (508)
Q Consensus 151 ~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~ 230 (508)
.|++|+.||.+.++.+ |+++++ +.+++ .++++.+|+++++++..+...|+++|++++|+
T Consensus 611 ~GieVv~Vp~D~~G~i---------------Dle~L~--a~I~~---~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~- 669 (954)
T PRK12566 611 AGMRVVIVECDPDGNV---------------DLDDLK--AKAAA---AGDRLSCLMITYPSTHGVYEEGIREICEVVHQ- 669 (954)
T ss_pred CCCEEEEeccCCCCCc---------------CHHHHH--HHhhc---cCCCEEEEEEEecCcCceecchHHHHHHHHHH-
Confidence 6999999999877777 688888 66632 24788999999998887777889999999998
Q ss_pred ccccccCCCCCCCeEEEEeccccCCCCCCC-CCCCCCcEEEEeccccccCCCcceEEEEec-hhHhhhccccccCceEEe
Q 010538 231 ERILEISPFSKGRWMVLIDAAKGCVTQPPD-LSKYPVDFVVMSFYKIFGYPTGLGALIMRN-DAAKLLKNTYFSGGTVAA 308 (508)
Q Consensus 231 ~~~~~~~~~~~~g~~vivD~a~~~g~~~~d-~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~-~~~~~l~~~~~g~~~~~~ 308 (508)
+|++|++|+++..+..+++ ..++|+|++++++||||++|.|.|..++.. ...+.+.|.+.++..+..
T Consensus 670 -----------~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~ 738 (954)
T PRK12566 670 -----------HGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPV 738 (954)
T ss_pred -----------cCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCC
Confidence 8999999999998887777 478999999999999999999988888887 666667777665431100
Q ss_pred cccchhhhhhccCccccccCCCC-C--hhHHHHHHHHHHHHHhcChHHHHHHH--HHHHHHHHHHHhcccCCCCCceEEE
Q 010538 309 SIADIDFVKRRQGVEELFEDGTA-S--FLSIASIRHGFNLINSLTVPAICRHI--ASLGMYVRKVLLSLRHENGADVCTI 383 (508)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~gt~-~--~~~~~~l~~al~~~~~~g~~~i~~~~--~~l~~~l~~~L~~l~~~~~~~~~~~ 383 (508)
.+.+..+ |+. + +.+...+-.|..++...|.+..+.+. ..+++|+++.|.+.. ++.+
T Consensus 739 ------------~G~~~r~-ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~~------~v~~ 799 (954)
T PRK12566 739 ------------EGPDPNN-GAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANQLGGAF------PVLY 799 (954)
T ss_pred ------------CCCCCCC-CceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhhC------CCCc
Confidence 0011111 322 2 22222344567777777776333333 678999999997642 2333
Q ss_pred ecCCCCCcccCCCCceEEEEeeCCC-CCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCC
Q 010538 384 YGTYTSEVSYHDTGSMVSFNLKRPD-GSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWD 462 (508)
Q Consensus 384 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 462 (508)
.+... .-.+-..+.+...+ ....+..++.+.|.++||.... ..+ +
T Consensus 800 -~~~~~-----~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt-~~f-P-------------------------- 845 (954)
T PRK12566 800 -RGRNE-----RVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPT-MSF-P-------------------------- 845 (954)
T ss_pred -CCCCC-----CeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeE-Eee-c--------------------------
Confidence 22111 00122222222211 1124456799999999998654 211 1
Q ss_pred CccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 463 DNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 463 ~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
..+.+||+++.++|.+|+|+++++|+.+.+.++.
T Consensus 846 --------v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 846 --------VPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred --------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 1578999999999999999999999999887654
No 186
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.88 E-value=7.6e-21 Score=199.32 Aligned_cols=310 Identities=17% Similarity=0.137 Sum_probs=222.8
Q ss_pred eeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhc
Q 010538 44 LDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAF 123 (508)
Q Consensus 44 ld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l 123 (508)
.-....+.+++.+.+.+.. ++.....++. ..+.+..+.+++..+++++++.+.+ ..-.||+|+|+|+.+++.+.
T Consensus 66 ~~~~~~~~~~~~a~~~~~~-~~~~nl~d~~----~~p~a~~~E~~~v~~l~~l~~~~~~-~~G~~t~GgTean~lal~aa 139 (460)
T COG0076 66 LAGFCPTRVPPVAAELLVS-ALNKNLGDPD----ESPAAAELEERVVNMLSDLLGAPEE-ASGTFTSGGTEANLLALLAA 139 (460)
T ss_pred EEccCCCCCHHHHHHHHHH-HHhhcCCCcc----cChhHHHHHHHHHHHHHHHhCCCCC-CceEEEcChHHHHHHHHHHH
Confidence 3334445445544454433 3332222222 2234667788899999999999633 26899999999998776554
Q ss_pred CCCC-------------CCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcC
Q 010538 124 PWSH-------------QSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 124 ~~~~-------------g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
.+.. ..+|+++...|.|+.....++ |++++.+|... +..+ |+++++
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l---G~~~~~v~~~~~~~~i---------------d~~~l~-- 199 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL---GLGLRRVPTVPTDYRI---------------DVDALE-- 199 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHh---CCCceeEEeccCcccc---------------CHHHHH--
Confidence 3211 127999999999888776665 99999999887 5556 788998
Q ss_pred CCCCCCCCCCCCce--EEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC-------C
Q 010538 190 ASFPERDPAGDAYN--LFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP-------D 260 (508)
Q Consensus 190 ~~l~~~~~~~~~t~--lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~-------d 260 (508)
+++++ .|. +|+.+.+.+++|.+.|+++|.++|++ +++++|||+|.+....|+ +
T Consensus 200 ~~i~~------~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~------------~~i~lHVDAA~GG~~~pf~~~~~~~~ 261 (460)
T COG0076 200 EAIDE------NTIGGVVVGTAGTTDTGSIDDIEELADIAEE------------YGIWLHVDAAFGGFLLPFLEPDGRWD 261 (460)
T ss_pred HHHHh------hccCceEEEEecCCCCCccCCHHHHHHHHHH------------cCCcEEEEccccceeecccCccchhh
Confidence 66654 333 48889999999999999999999998 899999999998765544 3
Q ss_pred CCCCCCcEEEEeccccccCCCcceEEEEech-hHhhh-c--cccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 261 LSKYPVDFVVMSFYKIFGYPTGLGALIMRND-AAKLL-K--NTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 261 ~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~-~~~~l-~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
+.--++|.++.|+||++..|.|+|+++++++ ...+. . ..+.+++. .......|+.+....
T Consensus 262 f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~----------------~~~~ti~~sr~~~~~ 325 (460)
T COG0076 262 FGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGG----------------IPNFTILGSRPGRQA 325 (460)
T ss_pred cCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCC----------------cCceeEeeccchHHH
Confidence 3334789999999998777999999999987 33322 1 22222210 122233456666678
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHH
Q 010538 337 ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYRE 416 (508)
Q Consensus 337 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 416 (508)
+++++.+..+...|+.++.+++.++++++.+.|+++ +.++++.++. .++|+|++++.... ..+
T Consensus 326 ~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~------~~~e~~~~p~--------l~~V~fr~~~~~~~---~~~ 388 (460)
T COG0076 326 LALYANLRRLGREGYRKLLDRTLELARYLAEELEKL------GDFELVNEPE--------LPIVAFRLKDDEDT---LAD 388 (460)
T ss_pred HHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC------CCcEeecCCc--------cceEEEEcCCcccc---hhc
Confidence 888899999888899999999999999999999998 3599998775 79999999553210 122
Q ss_pred HHHHHhhCCCeecc
Q 010538 417 VEKLASLSGIQLRT 430 (508)
Q Consensus 417 l~~~L~~~gI~v~~ 430 (508)
....++..|..+..
T Consensus 389 ~~~~~~~~gw~v~~ 402 (460)
T COG0076 389 LSERLDRRGWQVPA 402 (460)
T ss_pred hHHHHHhcCceeec
Confidence 55666667777755
No 187
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.88 E-value=1.3e-20 Score=198.95 Aligned_cols=328 Identities=16% Similarity=0.033 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
..++|+.++++++.+ .+++|+|+|+|+.+++.++ .++|| |+++...++++..++.+ .|.+++.+|.+....
T Consensus 80 ~~~Lreaia~~~~~~----~vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~~~~~~~~i~~---~G~~~v~v~~~~~~~ 150 (460)
T PRK13238 80 YYRLEDAVKDIFGYP----YTIPTHQGRAAEQILFPVL-IKKGD-VVPSNYHFDTTRAHIEL---NGATAVDLVIDEALD 150 (460)
T ss_pred HHHHHHHHHHHhCCC----cEEECCCHHHHHHHHHHHh-CCCCC-EEccCCcccchHHHHHH---cCCEEEEEecccccc
Confidence 677889999999874 5899999999999999998 78889 88887777777666554 599999998863200
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCc-cccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSG-SRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG-~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
.+. .-..+-.+|+++++ +.+.+. ..++|++|++++++|+|| .+++.+.+.++++ +|++||+
T Consensus 151 ~~~-----~~~f~g~id~e~Le--~~i~~~--~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~---------ia~~~gi 212 (460)
T PRK13238 151 TGS-----RHPFKGNFDLEKLE--ALIEEV--GAENVPFIVMTITNNSAGGQPVSMANLRAVYE---------IAKKYGI 212 (460)
T ss_pred ccc-----cccccCCcCHHHHH--HHHhhc--CCCceeEEEEecCCCCCCCcCCCHHHHHHHHH---------HHHHcCC
Confidence 000 00001113789998 666321 014799999999999997 8888764444433 3334999
Q ss_pred EEEEeccccCC-----------CCCCCCCC------CCCcEEEEeccccccCCCcceEEEEe-chhHhhhccccccCceE
Q 010538 245 MVLIDAAKGCV-----------TQPPDLSK------YPVDFVVMSFYKIFGYPTGLGALIMR-NDAAKLLKNTYFSGGTV 306 (508)
Q Consensus 245 ~vivD~a~~~g-----------~~~~d~~~------~~~D~~~~S~~K~~g~P~G~G~l~~~-~~~~~~l~~~~~g~~~~ 306 (508)
+||.|+++..+ ....++.+ ...|++++|++|.+.+|.| |+++.+ +++.++++......
T Consensus 213 ~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~--- 288 (460)
T PRK13238 213 PVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILY--- 288 (460)
T ss_pred EEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhccccc---
Confidence 99999988542 23333321 2479999999996655877 888887 46776666543211
Q ss_pred EecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecC
Q 010538 307 AASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGT 386 (508)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~ 386 (508)
+.....|.++...+.++..+++...+ +...++..+.+++|.+.|.+. |+.+..|
T Consensus 289 ----------------~g~~t~~g~~~~~~~Ala~~l~e~~~---~~~~~~~~~~~~~l~~~L~~~-------G~~~~~p 342 (460)
T PRK13238 289 ----------------EGFPTYGGLAGRDMEALAVGLYEGMD---EDYLAYRIGQVEYLGEGLEEA-------GVPIQTP 342 (460)
T ss_pred ----------------CCcccccCcHHHHHHHHHhhHHHhhC---hHHHHHHHHHHHHHHHHHHHC-------CCCeEcc
Confidence 01112344455556666666653222 222333344579999999886 7888877
Q ss_pred CCCCcccCCCCceEEEEeeCC----CCCcc-CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccC
Q 010538 387 YTSEVSYHDTGSMVSFNLKRP----DGSWF-GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCW 461 (508)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~~----~~~~~-~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 461 (508)
.+ ++.+.+++... +...+ +.....+++.+.||.+.++..+..+... -.|.
T Consensus 343 ~G--------g~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~-~~~~---------------- 397 (460)
T PRK13238 343 AG--------GHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP-KTGE---------------- 397 (460)
T ss_pred CC--------ceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCC-CCcc----------------
Confidence 65 67777777542 11222 2234567778999999887655433210 0000
Q ss_pred CCccccCCCCCceEEEecCC-CCCHHHHHHHHHhhhhhhh
Q 010538 462 DDNDIIHGKPTGAIRVSFGY-MSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 462 ~~~~~~~~~~~~~iRis~~~-~~t~eev~~l~~~~~~~~~ 500 (508)
........+|+++.- --|.++++.++++|..+.+
T Consensus 398 -----~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 398 -----QLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred -----ccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 000124789999983 2389999999999887753
No 188
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=1e-20 Score=193.21 Aligned_cols=274 Identities=14% Similarity=0.078 Sum_probs=191.7
Q ss_pred HHHHHHHHHHcCCC-CCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 87 RAAREQVLDYFNAS-MKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 87 ~~~r~~la~~~~~~-~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
.++++.+|+++|++ ++ +|++|+|+++++.++... .++|+ |++.. |++......++..|++++.+|.+. ..
T Consensus 56 ~~L~~~ia~~~~~~~~~--~I~i~~Gs~e~i~~l~~~--~~~g~-v~v~~---P~y~~y~~~~~~~g~~~~~v~~~~-~~ 126 (339)
T PRK06959 56 DGLAACAARYYGAPDAA--HVLPVAGSQAAIRALPAL--LPRGR-VGIAP---LAYSEYAPAFARHGHRVVPLDEAA-DT 126 (339)
T ss_pred HHHHHHHHHHhCCCCcc--cEEECcCHHHHHHHHHHh--cCCCe-EEEcC---CCcHHHHHHHHHCCCEEEeecccc-hh
Confidence 67889999999997 46 899999999999977654 35666 66555 455555555666799999887653 11
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeE
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWM 245 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~ 245 (508)
+. +.++++++++++||||.+++.+++.++++. +++++++
T Consensus 127 --------------------~~------------~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~---------~~~~~~~ 165 (339)
T PRK06959 127 --------------------LP------------AALTHLIVVNPNNPTAERLPAARLLRWHAQ---------LAARGGT 165 (339)
T ss_pred --------------------cc------------ccCCEEEEeCCCCCCCCCCCHHHHHHHHHH---------HHHcCCE
Confidence 12 134688899999999999999999988752 3347889
Q ss_pred EEEeccccCCCCCCCCCCC---CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 246 VLIDAAKGCVTQPPDLSKY---PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 246 vivD~a~~~g~~~~d~~~~---~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
+|+|+++.......++... +--+++.|++|.|| .+| +||+++++++++.+......
T Consensus 166 vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~g-l~GlRiGy~v~~~~li~~l~~~~~~------------------ 226 (339)
T PRK06959 166 LIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFG-LAGVRAGFVLAAPALLAALRDALGA------------------ 226 (339)
T ss_pred EEEECCCccCCCcccchhccCCCCEEEEecChhhcC-CcchheEEEecCHHHHHHHHHhcCC------------------
Confidence 9999998753322222211 22378899999998 557 89999999888776544111
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceE
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMV 400 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (508)
.+.+.....++.++++-. .-.+..++++.+.++++.+.|+++ ++++. + . +.++
T Consensus 227 --------~~vs~~~q~a~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~-~-~--------~~f~ 279 (339)
T PRK06959 227 --------WTVSGPARHAVRAAFADA--AWQAAMRERLAADGARLAALLRAH-------GFAVH-A-T--------PLFS 279 (339)
T ss_pred --------CCCcHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHHC-------CCCcc-C-c--------ceEE
Confidence 112333444444454321 124667788888999999999886 45543 1 1 5677
Q ss_pred EEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC
Q 010538 401 SFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG 480 (508)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 480 (508)
++++++ . ..+.+.|.++||.|+. |. ..+++|||++
T Consensus 280 ~~~~~~--~-----~~l~~~l~~~GI~vr~---~~-----------------------------------~~~~lRisi~ 314 (339)
T PRK06959 280 WTDDPR--A-----AALHAALARRGIWTRY---FA-----------------------------------PPPSVRFGLP 314 (339)
T ss_pred EEeCCC--H-----HHHHHHHHhCCeEEEE---CC-----------------------------------CCCeEEEECC
Confidence 777642 1 3478889999999974 21 1468999984
Q ss_pred CCCCHHHHHHHHHhhhhhhhhhh
Q 010538 481 YMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 481 ~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
.+.+|+++++++|+++++-++
T Consensus 315 --~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 315 --ADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred --CCHHHHHHHHHHHHHHHHHHh
Confidence 288999999999998887664
No 189
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.88 E-value=6.5e-21 Score=198.00 Aligned_cols=315 Identities=13% Similarity=0.024 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHH-HHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREY-ALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~-~~~~G~~v~~v~~~~~~ 164 (508)
.+++++.+|+++|.+. .++ ++|++.|+.+++.++ .++|++|+++...|+........ ....|+++..++..
T Consensus 63 ~~~Le~~lA~l~G~~~---al~-~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~--- 134 (386)
T PRK06767 63 VKLFEERMAVLEGGEE---ALA-FGSGMAAISATLIGF-LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME--- 134 (386)
T ss_pred hHHHHHHHHHHhCCCc---EEE-ECCHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCC---
Confidence 6778999999999753 345 455567999998888 68899999998888776655443 44567777666542
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
|+++++ +++ .++|++|++++++||||.+.|+++|.++|++ +|+
T Consensus 135 -----------------d~~~l~--~~i------~~~tklV~lesp~NptG~v~dl~~I~~la~~------------~g~ 177 (386)
T PRK06767 135 -----------------TEADIE--NKI------RPNTKLIFVETPINPTMKLIDLKQVIRVAKR------------NGL 177 (386)
T ss_pred -----------------CHHHHH--Hhh------CcCceEEEEeCCCCCCceecCHHHHHHHHHH------------cCC
Confidence 356677 444 4678999999999999999999999999998 899
Q ss_pred EEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 245 MVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 245 ~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
++++|++++.+....++ ..++|+++.|++|+++++.+ .|+++.+++.++++......
T Consensus 178 ~vivD~a~a~~~~~~pl-~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~-------------------- 236 (386)
T PRK06767 178 LVIVDNTFCSPYLQRPL-ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRK-------------------- 236 (386)
T ss_pred EEEEECCCcccccCCch-hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHH--------------------
Confidence 99999999866544444 35789999999999986643 48888888876554322100
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEE-ecCCCCCc--ccCCCCce
Q 010538 323 EELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTI-YGTYTSEV--SYHDTGSM 399 (508)
Q Consensus 323 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 399 (508)
...+..+....+.+..+++ .+..+.++.+++++++.+.|++.+ +++. .-|+.... --..-+++
T Consensus 237 ---~~g~~~~~~~a~l~~~~L~-----tl~~r~~~~~~~a~~la~~L~~~p------~v~~v~~p~~~~~~~~~~~~gg~ 302 (386)
T PRK06767 237 ---DIGGIMAPFDAWLLLRGLK-----TLAVRMDRHCDNAEKIVSFLKNHD------AVEGVWYPEGELASRQMKRGGGV 302 (386)
T ss_pred ---HhCCCCCHHHHHHHHcCCC-----cHHHHHHHHHHHHHHHHHHHHcCC------CccEEECCCcHHHHHhCCCCCce
Confidence 0111222222222222222 245666788999999999999884 5654 32311000 00012789
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
++|.+++.. .....+.+.|+..++.++-|...+.-. +++. ..++.+...- +.-.+..++.||+|+
T Consensus 303 vsf~l~~~~---~~~~~f~~~l~~~~~~~s~G~~~sl~~-~p~~-~~~~~~~~~~----------~~~~gi~~~l~R~sv 367 (386)
T PRK06767 303 ISFSIKGGK---EETQAFINDLHFITIAVSLGDTETLIQ-HPAT-MTHAAIPAEL----------RQEMGIYDNLIRLSV 367 (386)
T ss_pred EEEEEcCCH---HHHHHHHHhCCccEEecCCCCcCcccc-CCCc-cccccCCHHH----------HHhcCCCCCeEEEEe
Confidence 999996421 123457888888888888874332210 0000 0111111100 001123478999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 010538 480 GYMSTFEDAKVNRCSS 495 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~ 495 (508)
+.-+.++=++.+-++|
T Consensus 368 GlE~~~dl~~dl~~al 383 (386)
T PRK06767 368 GLESWEDIVSDLEQAL 383 (386)
T ss_pred ccCCHHHHHHHHHHHH
Confidence 9865544444444444
No 190
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.88 E-value=9.5e-21 Score=195.31 Aligned_cols=295 Identities=14% Similarity=0.093 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEA 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~ 163 (508)
...++++++|++. ..+ .+++++++.|+.+++.++ +++|++|+++...|+.+..+.. .+...|++++.++.+..
T Consensus 52 ~~~~Le~~lA~l~--~~~---~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~ 125 (366)
T PRK07582 52 TWRALEAALGELE--GAE---ALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGM 125 (366)
T ss_pred cHHHHHHHHHHHc--CCC---EEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCCh
Confidence 4677889999998 333 555666678999999888 7889999999877776655543 45668999999987532
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
.. . ..++|++|++++++||+|.+.|+++|.++|++ +|
T Consensus 126 ~~---------------------~----------~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~------------~g 162 (366)
T PRK07582 126 AE---------------------A----------ALAGADLVLAETPSNPGLDVCDLAALAAAAHA------------AG 162 (366)
T ss_pred HH---------------------H----------hccCceEEEEECCCCCCCCccCHHHHHHHHHH------------cC
Confidence 10 1 12578999999999999999999999999998 89
Q ss_pred eEEEEecccc--CCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhh
Q 010538 244 WMVLIDAAKG--CVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 244 ~~vivD~a~~--~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
++++||++++ .+..|++ +++|+++.|+||+++||.| .|+++.+ +++++.+....
T Consensus 163 ~~lvVD~t~~~~~~~~p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~------------------ 221 (366)
T PRK07582 163 ALLVVDNTTATPLGQRPLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWR------------------ 221 (366)
T ss_pred CEEEEECCCCCccccCchh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHH------------------
Confidence 9999999985 4555554 4689999999999987877 5888875 45544443221
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc----
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY---- 393 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~---- 393 (508)
....++++....+.+...++. ++.+.++..+++..+.+.|++.+ .++ +.-|.-. ..+
T Consensus 222 ------~~~g~~~~~~~a~l~~r~l~t-----l~~R~~~~~~na~~la~~L~~~p------~v~~v~yp~l~-~~p~~~~ 283 (366)
T PRK07582 222 ------LLAGAIPGPFEAWLAHRSLGT-----LGLRFARQCANALAVAELLAGHP------AVRGVRYPGLP-GDPAHEV 283 (366)
T ss_pred ------HHhCCCCCHHHHHHHHhcccc-----HHHHHHHHHHHHHHHHHHHHhCC------CccEEECCCCC-CCccHHH
Confidence 111223333333333333332 45555777788888888888874 443 3322211 000
Q ss_pred -----CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeec---cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCcc
Q 010538 394 -----HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLR---TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDND 465 (508)
Q Consensus 394 -----~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~---~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 465 (508)
...+++++|.+++ . ..+.+.++..++... -|...+.... + ..++.
T Consensus 284 ~~~~~~~~gg~~s~~~~~--~-----~~~~~~~~~l~~~~~~~s~G~~~sl~~~---------~--~~~~~--------- 336 (366)
T PRK07582 284 AARQMRRFGGLVSFELAD--A-----AAAERFVAASRLVVAATSFGGVHTSADR---------R--ARWGD--------- 336 (366)
T ss_pred HHhhCCCCcceEEEEeCC--H-----HHHHHHHHhCCcceecccCCCccchhhh---------H--HHcCC---------
Confidence 0148899999963 1 236677777776643 2211111100 0 01110
Q ss_pred ccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 466 IIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 466 ~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
+..++.||+|+|+.+.++.++.|.++|..
T Consensus 337 ---~~~~~liR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 337 ---AVPEGFVRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred ---CCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 12368999999999999999999888764
No 191
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=1.9e-20 Score=194.68 Aligned_cols=168 Identities=17% Similarity=0.138 Sum_probs=134.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~ 161 (508)
....+++++.+|+++|++ .+++++|+++|+.+++.++ .++|++||++...|++..... ..+...|++++.++.+
T Consensus 60 ~p~~~~le~~la~l~g~~----~~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 134 (390)
T PRK08133 60 NPTVTMFQERLAALEGAE----ACVATASGMAAILAVVMAL-LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT 134 (390)
T ss_pred ChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence 345788999999999985 3678899999999999888 688999999998898776644 4566789999999864
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++
T Consensus 135 --------------------d~~~l~--~~i------~~~tklV~ie~p~NptG~v~dl~~I~~la~~------------ 174 (390)
T PRK08133 135 --------------------DLDAWR--AAV------RPNTKLFFLETPSNPLTELADIAALAEIAHA------------ 174 (390)
T ss_pred --------------------CHHHHH--Hhc------CcCCeEEEEECCCCCCCCcCCHHHHHHHHHH------------
Confidence 256667 444 5689999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--c-eEEEEechhHhhhc
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--L-GALIMRNDAAKLLK 297 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~-G~l~~~~~~~~~l~ 297 (508)
+|+++++|++++.+....++ +.++|+++.|+||+++ +.| + |+++.+++.++++.
T Consensus 175 ~gi~livD~t~~~~~~~~pl-~~g~Divv~S~sK~~~-g~g~~~GG~vv~~~~~~~~~~ 231 (390)
T PRK08133 175 AGALLVVDNCFCTPALQQPL-KLGADVVIHSATKYLD-GQGRVLGGAVVGSKELMEEVF 231 (390)
T ss_pred cCCEEEEECCCcccccCCch-hhCCcEEEeecceeec-CCcceEeEEEEcCHHHHHHHH
Confidence 99999999998765432222 4478999999999999 545 4 66666766654443
No 192
>PLN02672 methionine S-methyltransferase
Probab=99.88 E-value=2e-20 Score=210.20 Aligned_cols=343 Identities=11% Similarity=0.051 Sum_probs=224.6
Q ss_pred CCCeeeeCCCCCCC-CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCC-CceEEEcCChHHHH
Q 010538 39 NGTVYLDHAGATLY-SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMK-DYKCIFTSGATAAL 116 (508)
Q Consensus 39 ~~~iyld~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~~~i~~t~g~t~al 116 (508)
.+.+.|+.+-...+ |+.+.+++.+.+. .. +. ..+ ..+..+++++++++.+|++.+ +.+|++|+|+++++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~-~~--~~----s~g--~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFV-RQ--NI----SES--ETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHh-hc--CC----CCC--ChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 46799998876654 4445555544332 11 11 111 234567888999998888543 11799999999999
Q ss_pred HHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCC
Q 010538 117 KLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERD 196 (508)
Q Consensus 117 ~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~ 196 (508)
..++.++ .++|+.|+++...|+.+... ++..|++++.+|++.+..+ .+|+++++ +++.+
T Consensus 768 ~lll~aL-l~pGD~VLVp~PtY~~Y~~~---a~~~Ga~vv~Vpl~~e~gf-------------~lD~d~Le--~al~~-- 826 (1082)
T PLN02672 768 NKLVLCC-VQEGGTLCFPAGSNGTYVSA---AKFLKANFRRIPTKSSDGF-------------KLTAKTLA--STLET-- 826 (1082)
T ss_pred HHHHHHH-cCCCCEEEEeCCChHHHHHH---HHHcCCEEEEEecccccCC-------------CCCHHHHH--HHhcc--
Confidence 9999998 57899999998666666554 4456999999998643222 22677888 55521
Q ss_pred CCCCCceEEEEeCCC-CCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC----CCC--CCCCC----CC-
Q 010538 197 PAGDAYNLFAFPSEC-NFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----VTQ--PPDLS----KY- 264 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~-n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----g~~--~~d~~----~~- 264 (508)
.+.+++++++++ ||||.+++.+++.++++ +|+++|++||+|.+++. +.. +.++. ..
T Consensus 827 ---~~~~~I~L~nPnhNPTG~v~S~eeLe~Lle---------la~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~ 894 (1082)
T PLN02672 827 ---VKKPWVYISGPTINPTGLLYSNSEIEEILS---------VCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLK 894 (1082)
T ss_pred ---CCCCEEEEECcCCCCcCccCCHHHHHHHHH---------HHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhc
Confidence 133577788886 99999999998888877 67779999999999862 211 11111 11
Q ss_pred -----CCcEEEEeccccccCCCc--ceEEEEech-hHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 265 -----PVDFVVMSFYKIFGYPTG--LGALIMRND-AAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 265 -----~~D~~~~S~~K~~g~P~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
..-+++.|++|.++ .+| +||++++++ +++.+.... . ...+.....
T Consensus 895 ~~sks~nVIvL~SfSKkf~-lpGLRIGylIap~~eLi~~l~~~~-~-------------------------~s~~~~~~q 947 (1082)
T PLN02672 895 SSNPSFAVALLGGLSTELL-SGGHEFGFLALNDSVLIDAFHSAP-G-------------------------LSRPHSTLK 947 (1082)
T ss_pred cccCCceEEEEeCcHHhhc-cHHHHheeEEeCCHHHHHHHHHhh-h-------------------------hcCCCcHHH
Confidence 12367789999888 557 899999765 666554320 0 011111223
Q ss_pred HHHHHHHHHHHh------cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC---
Q 010538 337 ASIRHGFNLINS------LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP--- 407 (508)
Q Consensus 337 ~~l~~al~~~~~------~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 407 (508)
+++.+++.++.. ..+.+.++.+.+.++++.+.|++. ++.+..|.+ +.++|+.+...
T Consensus 948 ~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-------Gi~v~~PeG--------GFfLwl~l~~~l~~ 1012 (1082)
T PLN02672 948 YTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-------GWDVLEPQG--------GISMVAKPSAYLGK 1012 (1082)
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCeEecCCc--------EEEEEEEccccccc
Confidence 333333332210 125566777889999999999886 576665543 56666655311
Q ss_pred ----C------CCccCHHHHHHHHh-hCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEE
Q 010538 408 ----D------GSWFGYREVEKLAS-LSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIR 476 (508)
Q Consensus 408 ----~------~~~~~~~~l~~~L~-~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iR 476 (508)
+ +...+..++.+.|. +.||.+.+|..|. .++++|
T Consensus 1013 ~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG-----------------------------------~~g~~R 1057 (1082)
T PLN02672 1013 TVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTG-----------------------------------IPGYCR 1057 (1082)
T ss_pred cccccccccccccCCCHHHHHHHHHHcCCEEEecCcccC-----------------------------------CCCeEE
Confidence 0 00234456776665 5699999986431 157899
Q ss_pred EecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 477 VSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 477 is~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
|+++. +.+++++.++.|++|.+.+
T Consensus 1058 Isfa~--~~e~LeeALerL~kf~~~~ 1081 (1082)
T PLN02672 1058 FSFAL--EDSEFDRALKAIARFKELV 1081 (1082)
T ss_pred EEecC--CHHHHHHHHHHHHHHHHhh
Confidence 99994 7889999999999887654
No 193
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.87 E-value=6.3e-20 Score=190.53 Aligned_cols=338 Identities=16% Similarity=0.117 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC-c
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE-A 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~-~ 163 (508)
...++++.+++++|.+. .++++|+|+|+.+++.++..++|++|+++...|+++.. .+...|++++.++++. +
T Consensus 30 ~~~~le~~la~~~g~~~----~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~---~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 30 TVPAFEEALAEYVGAKY----AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATAN---CALYCGAKVDFVDIDPDT 102 (380)
T ss_pred hHHHHHHHHHHHHCCCe----EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH---HHHHcCCEEEEEecCCCc
Confidence 36778999999999953 34456789999999999877889999999987776643 3455799999999864 3
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
..+ |+++++ +++.+. ..++|++|++++ ++|...|+++|.++|++ +|
T Consensus 103 ~~~---------------d~~~l~--~~i~~~--~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~------------~~ 148 (380)
T TIGR03588 103 GNI---------------DEDALE--KKLAAA--KGKLPKAIVPVD---FAGKSVDMQAIAALAKK------------HG 148 (380)
T ss_pred CCc---------------CHHHHH--HHhhcc--cCCCceEEEEeC---CCCccCCHHHHHHHHHH------------cC
Confidence 334 678888 665321 115788888654 58999999999999998 99
Q ss_pred eEEEEeccccCCCCCCCCCCCCC----cEEEEecc--ccccCCCcceEEEEe-chhHhhhccccccCceEEecccchhhh
Q 010538 244 WMVLIDAAKGCVTQPPDLSKYPV----DFVVMSFY--KIFGYPTGLGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFV 316 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~~~~~----D~~~~S~~--K~~g~P~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~ 316 (508)
++||+|++|++|.. ++....+. |+.++|+| |+++.+.| |+++.+ +++.+++++....+.... ...+.
T Consensus 149 ~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~~~~~~~~~~~g~~~~----~~~~~ 222 (380)
T TIGR03588 149 LKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEG-GAVTTNDEELAERMRLLRSHGITKD----PLLFE 222 (380)
T ss_pred CEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCc-eEEEECCHHHHHHHHHHHHCCCCCC----ccccc
Confidence 99999999999876 56555666 99999998 88874544 666654 455555554322221100 00000
Q ss_pred hhccCccccccCCCC--ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccC
Q 010538 317 KRRQGVEELFEDGTA--SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYH 394 (508)
Q Consensus 317 ~~~~~~~~~~~~gt~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~ 394 (508)
.+ ......++.++. |. .+-.+.+++...+-..++.+.++-+++++++.+.|.+++ +++++.++.. .
T Consensus 223 ~~-~~~~~~~~~~~~g~n~-~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~------~~~~~~~~~~----~ 290 (380)
T TIGR03588 223 KQ-DEGPWYYEQQELGFNY-RMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLP------YFTPLTIPLG----S 290 (380)
T ss_pred cc-ccCcceeeeecccccc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CccCCCCCCC----C
Confidence 00 001111221211 11 111122222211111267888888999999999998873 5655443211 0
Q ss_pred CCC-ceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCC--ChhhhhhhhhcCCccCCCccccCCCC
Q 010538 395 DTG-SMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGL--SHSDLLSNIEAGHVCWDDNDIIHGKP 471 (508)
Q Consensus 395 ~~~-~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~~ 471 (508)
... .+..+.+...+ ..+..++.+.|.++||.++....+... ++.+.- +...+.. -....
T Consensus 291 ~~~~~~~~i~~~~~~--~~~r~~l~~~L~~~gI~~~~~~~~~~~--~~~~~~~~~~~~~p~--------------a~~~~ 352 (380)
T TIGR03588 291 KSAWHLYPILLDQEF--GCTRKEVFEALRAAGIGVQVHYIPVHL--QPYYRQGFGDGDLPS--------------AENFY 352 (380)
T ss_pred EeEEEEEEEEECCcC--CCCHHHHHHHHHHCCCCcccCCccccc--ChhhhccCCcCCCcH--------------HHHHH
Confidence 011 22233333211 134567999999999998865432111 011000 0000000 00112
Q ss_pred CceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 472 TGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 472 ~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
...+++.+|...|.+||+++++.+++++
T Consensus 353 ~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 353 LAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred hceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 4789999999999999999999998764
No 194
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=6.1e-21 Score=194.45 Aligned_cols=323 Identities=12% Similarity=0.048 Sum_probs=200.9
Q ss_pred eeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhh
Q 010538 43 YLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEA 122 (508)
Q Consensus 43 yld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~ 122 (508)
-|..+..+.++|.+.+++.+ .... ...|. ......++++.+++++|.++. ++++|+++++.+++.+
T Consensus 3 ~~~~~~~~~p~~~~~~a~~~-~~~~-----~~~Y~----~~~~~~~L~~~la~~~g~~~~----~v~~~g~~a~~~~l~~ 68 (333)
T PRK10534 3 DLRSDTVTRPSRAMLEAMMA-APVG-----DDVYG----DDPTVNALQDYAAELSGKEAA----LFLPTGTQANLVALLS 68 (333)
T ss_pred ccccccCCCCCHHHHHHHHh-ccCC-----CcccC----CCHHHHHHHHHHHHHhCCCeE----EEeCchHHHHHHHHHH
Confidence 34445555578888888644 2111 11221 133467889999999998754 5777778787777777
Q ss_pred cCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCc
Q 010538 123 FPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAY 202 (508)
Q Consensus 123 l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t 202 (508)
+ ..+|++|+++...|.............+++++.++.+.+..+ |+++++ +++.++.....++
T Consensus 69 ~-~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------d~~~l~--~~i~~~~~~~~~~ 130 (333)
T PRK10534 69 H-CERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTL---------------PLDKVA--AKIKPDDIHFART 130 (333)
T ss_pred h-cCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCC---------------CHHHHH--HhhcccCcCcccc
Confidence 6 578888887765554322111011112367777777654444 678888 6553211111268
Q ss_pred eEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC---CCCCC--CCCCcEEEEeccccc
Q 010538 203 NLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ---PPDLS--KYPVDFVVMSFYKIF 277 (508)
Q Consensus 203 ~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~---~~d~~--~~~~D~~~~S~~K~~ 277 (508)
++|+++++ +||.++|.++|.++++ +|+++++++++|+++.++.. ..... ....|.++.|++|.|
T Consensus 131 ~lv~l~np--~~G~v~~~~~l~~i~~---------~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~ 199 (333)
T PRK10534 131 RLLSLENT--HNGKVLPREYLKQAWE---------FTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGL 199 (333)
T ss_pred eEEEEecC--CCCeecCHHHHHHHHH---------HHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCC
Confidence 99999864 4699999998887665 45558999999998765321 11111 012466667999999
Q ss_pred cCCCcce-EEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHH
Q 010538 278 GYPTGLG-ALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICR 356 (508)
Q Consensus 278 g~P~G~G-~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~ 356 (508)
+.+ +| +++.++++++.++.....+ .+..+..++ ++.+++..+.. ..+..+
T Consensus 200 ~~~--~G~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~-~~a~~~~~l~~--~~~~~~ 250 (333)
T PRK10534 200 GTP--VGSLLVGNRDYIKRARRWRKMT------------------------GGGMRQAGI-LAAAGLYALKH--NVARLQ 250 (333)
T ss_pred CCc--ccceEEcCHHHHHHHHHHHHHh------------------------CCchhhHHH-HHHHHHHHHHh--hHHHHH
Confidence 844 57 6777888877665432110 011111111 11112222222 123334
Q ss_pred HHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCc
Q 010538 357 HIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNP 436 (508)
Q Consensus 357 ~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~ 436 (508)
+..+.++++.+.|+++ |++++.+ . ++++++++++. +...+.+.|.++||.++++
T Consensus 251 ~~~~~r~~l~~~L~~~-------g~~~~~~-~--------~nfv~~~~~~~-----~~~~~~~~l~~~gi~v~~~----- 304 (333)
T PRK10534 251 EDHDNAAWLAEQLREA-------GADVMRQ-D--------TNMLFVRVGEE-----QAAALGEYMRERNVLINAS----- 304 (333)
T ss_pred HHHHHHHHHHHHHHhC-------CCccCCC-C--------ceEEEEECCch-----hHHHHHHHHHHcCeeecCC-----
Confidence 4556678999999886 6776544 2 78999888632 1235788999999999764
Q ss_pred hHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 437 GACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 437 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
..+|++.+.-.|.++++++++.|++|+
T Consensus 305 ------------------------------------~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ------------------------------------PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ------------------------------------ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 247888877779999999999998765
No 195
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=3.6e-20 Score=191.61 Aligned_cols=312 Identities=15% Similarity=0.056 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
.....+++++|++.|. + .+++++|+++|+.+++.++ .++|++|+++...|++..... ......|+++..++..
T Consensus 53 pt~~~Le~~lA~leg~--e--~ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~- 126 (388)
T PRK08861 53 PNRGLLEQTLSELESG--K--GAVVTNCGTSALNLWVSAL-LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQS- 126 (388)
T ss_pred chHHHHHHHHHHHhCC--C--eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCC-
Confidence 3467788999999996 4 7999999999999999998 689999999987787654443 3344567888887631
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ .++|++|++++++||||.++|+++|.++|++ +
T Consensus 127 -------------------d~e~l~--~~i------~~~tklV~lesP~NPtG~v~dl~~I~~la~~------------~ 167 (388)
T PRK08861 127 -------------------DAAALD--AAL------AKKPKLILLETPSNPLVRVVDIAELCQKAKA------------V 167 (388)
T ss_pred -------------------CHHHHH--Hhc------CcCCeEEEEECCCCCCCcccCHHHHHHHHHH------------c
Confidence 356677 444 4688999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEech-hHhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRND-AAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|.+++.+....++ +.++|+++.|+||+++||.+ .|+++.+++ +.++++..
T Consensus 168 gi~vIvDea~~~~~~~~pl-~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~-------------------- 226 (388)
T PRK08861 168 GALVAVDNTFLTPVLQKPL-ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWW-------------------- 226 (388)
T ss_pred CCEEEEECCccccccCCCc-ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHH--------------------
Confidence 9999999999876543333 35899999999999998865 466666543 33333211
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCccc-----
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSY----- 393 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~----- 393 (508)
+.......+....+.+...++. +..+.++..+.+..+.+.|++.+ .| +++-|.-+. .|
T Consensus 227 ----~~~~G~~~~p~~a~l~~rgl~T-----l~lR~~~~~~~a~~~a~~L~~~p------~v~~V~yP~l~~-~p~~~~~ 290 (388)
T PRK08861 227 ----GNCIGATGTPFDSYMTLRGIRT-----LGARMRVHEESAQQILAYLQTQS------LVGTIYHPSLPE-HPGHEIA 290 (388)
T ss_pred ----HhccCCCCChHHHHHHHhcCCC-----HHHHHHHHHHHHHHHHHHHHhCC------CeeEEECCCCCC-CchHHHH
Confidence 0111122333333333333332 45566777777778888887763 34 343332110 00
Q ss_pred ----CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhh----hhhhcCCccCCCcc
Q 010538 394 ----HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLL----SNIEAGHVCWDDND 465 (508)
Q Consensus 394 ----~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~----~~~~~~~~~~~~~~ 465 (508)
..-+++++|.+++. .+. ...+...|+--.+.++.|...+.- .+++. ..|+.+. +.+|
T Consensus 291 ~~~~~g~gg~~sf~~~~~-~~~--~~~f~~~l~l~~~~~s~G~~~sl~-~~p~~-~~h~~~~~~~~~~~g---------- 355 (388)
T PRK08861 291 KKQQSGFGSMLSFEFAGS-FEQ--LKVFVKALALFSLAESLGGVESLI-CHPAS-MTHRAMGEEALAEAG---------- 355 (388)
T ss_pred HHhCCCCCceEEEEeCCC-HHH--HHHHHhcCCcceEccCCCCCccee-eCCCc-ccccccCHHHHHhcC----------
Confidence 01378999999641 111 122444444444455555321110 00000 0111111 1232
Q ss_pred ccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 466 IIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 466 ~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
..++.||+|++.-+-++=++.+.+++.
T Consensus 356 ----i~~~liRlsvGlE~~~dli~Dl~~al~ 382 (388)
T PRK08861 356 ----VSQQLLRLSVGLEDAQDLIADLDQAFA 382 (388)
T ss_pred ----CCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 247899999998554444444444443
No 196
>PRK06460 hypothetical protein; Provisional
Probab=99.87 E-value=3e-20 Score=192.25 Aligned_cols=247 Identities=14% Similarity=0.092 Sum_probs=168.6
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEeccccc-chHHHHHHHHhcCCeEE
Q 010538 78 ISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHN-SVLGIREYALSQGAAAF 156 (508)
Q Consensus 78 ~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~-s~~~~~~~~~~~G~~v~ 156 (508)
.+.......+++++.+|+++|++.+ +++++| ++|+..++.++ .++|++|+++...++ ++..+...++..|+++.
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~~~---v~~~sG-~~ai~~~l~al-~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~ 113 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAEMG---VAFSSG-MGAISTTALAL-LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVD 113 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCCcE---EEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEE
Confidence 3444556678899999999999654 676555 68999999988 688999998876664 45555566777899999
Q ss_pred EEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 157 AIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 157 ~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
.++.+.. +.++ +. ..++|++|++++++||||.+.|+++|.++|++
T Consensus 114 ~~~~~~~--------------------~~l~--~~------~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~------- 158 (376)
T PRK06460 114 ASNPGSD--------------------NIIE--KA------KSKRYDVVFVENITNPLLRVVDITELSKVCKE------- 158 (376)
T ss_pred EECCCCH--------------------HHHH--Hh------cCCCceEEEEECCCCCCCcccCHHHHHHHHHH-------
Confidence 8876431 1123 21 24678999999999999999999999999997
Q ss_pred CCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchh
Q 010538 237 SPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADID 314 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 314 (508)
+|+++++|++++.+.....+ ..++|+++.|+||+++|+.+ .|+++.++++++.+......
T Consensus 159 -----~g~~vivDea~~~~~~~~~l-~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~------------ 220 (376)
T PRK06460 159 -----NGSILIVDATFSTPINQKPL-ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRT------------ 220 (376)
T ss_pred -----cCCEEEEECCcCccccCChh-hcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHh------------
Confidence 89999999999865322222 34689999999999985643 68888888877665432110
Q ss_pred hhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCccc
Q 010538 315 FVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSY 393 (508)
Q Consensus 315 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~ 393 (508)
+ ..+.+....+.+...+++ ++.+.+++.+.++++.+.|++.+ .+ +++-|.-. ..+
T Consensus 221 -----------~-g~~~~~~~a~~~l~~~~~-----l~~r~~~~~~n~~~l~~~L~~~p------~v~~v~yp~l~-~~p 276 (376)
T PRK06460 221 -----------L-GTSLDPHAAYLTLRGIKT-----LKIRMDVINRNAEQIAEFLEGHP------KVVKVYYPGLK-SHV 276 (376)
T ss_pred -----------c-CCCCCHHHHHHHHhchhh-----HHHHHHHHHHHHHHHHHHHHcCC------CccEEECCCCC-CCc
Confidence 1 111221112222223333 45667788889999999998763 33 33333100 000
Q ss_pred ---------CCCCceEEEEeeC
Q 010538 394 ---------HDTGSMVSFNLKR 406 (508)
Q Consensus 394 ---------~~~~~~v~~~~~~ 406 (508)
..-+++++|.+++
T Consensus 277 ~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 277 DYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred cHHHHHhhCCCCceEEEEEEcC
Confidence 1237899999964
No 197
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=2.6e-20 Score=192.04 Aligned_cols=242 Identities=11% Similarity=0.047 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
.-.+.+.+.+|++-|.+. .++++|++.|+++++.++ +++|++||++...|.+..... ..+++.|+++..++..
T Consensus 62 Pt~~~le~~la~LEg~~~----a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~- 135 (395)
T PRK08114 62 LTHFSLQEAMCELEGGAG----CALYPCGAAAVANAILAF-VEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL- 135 (395)
T ss_pred hhHHHHHHHHHHHhCCCe----EEEEhHHHHHHHHHHHHH-cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 345667889999988764 466677999999999988 789999999988887665554 4567789999998752
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|.++++ ++| +++|++|++.+++||+|.+.|+++|+++||+ +
T Consensus 136 -------------------d~~~l~--~~l------~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~------------~ 176 (395)
T PRK08114 136 -------------------IGADIA--KLI------QPNTKVVFLESPGSITMEVHDVPAIVAAVRS------------V 176 (395)
T ss_pred -------------------CHHHHH--Hhc------CCCceEEEEECCCCCCCEeecHHHHHHHHHH------------h
Confidence 355667 444 5679999999999999999999999999997 6
Q ss_pred --CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCC--cceEEEEechhHhhhccccccCceEEecccchhhhhh
Q 010538 243 --RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPT--GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 243 --g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~--G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
|++++||++++.|.. ++..++++|+++.|+||+++|+. +.|+++.+++..+.++...
T Consensus 177 g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~------------------ 237 (395)
T PRK08114 177 NPDAVIMIDNTWAAGVL-FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENS------------------ 237 (395)
T ss_pred CCCCEEEEECCCccccc-cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHH------------------
Confidence 599999999999887 89999999999999999888785 4687777766544333110
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCc------
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEV------ 391 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~------ 391 (508)
....+..+....+.+...++ .+..+.++..+.+..+.+.|++.+ .+ +++-|.-..-
T Consensus 238 ------~~~G~~~~p~~a~l~~rgl~-----TL~lR~~~~~~na~~va~~L~~hp------~V~~V~yPgl~~~p~~~~~ 300 (395)
T PRK08114 238 ------YLMGQMVDADTAYMTSRGLR-----TLGVRLRQHEESSLKVAEWLAEHP------EVARVNHPALPGCKGHEFW 300 (395)
T ss_pred ------HhccCCCCHHHHHHHHcCCC-----cHHHHHHHHHHHHHHHHHHHHcCC------CEeEEECCCCCCCccHHHH
Confidence 01112223222222222332 245667777888888888888774 34 3444321100
Q ss_pred -c-cCCCCceEEEEeeC
Q 010538 392 -S-YHDTGSMVSFNLKR 406 (508)
Q Consensus 392 -~-~~~~~~~v~~~~~~ 406 (508)
. -..-+++++|.+++
T Consensus 301 ~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 301 KRDFTGSSGLFSFVLKK 317 (395)
T ss_pred HhhCCCCceEEEEEecC
Confidence 0 00137899999964
No 198
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.87 E-value=3.4e-20 Score=188.80 Aligned_cols=272 Identities=14% Similarity=0.074 Sum_probs=188.4
Q ss_pred HHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCc
Q 010538 87 RAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDN 166 (508)
Q Consensus 87 ~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~ 166 (508)
..+|+.++++++. + +|++|+|+++++.+++. ..+|++|++....|+ .....++..|++++.+|.+.
T Consensus 52 ~~Lr~~ia~~~~~--~--~I~it~Gs~~al~~~~~---~~~gd~v~v~~P~y~---~~~~~~~~~g~~~~~v~~~~---- 117 (330)
T PRK05664 52 DGLEAAARAYYGA--P--QLLPVAGSQAAIQALPR---LRAPGRVGVLSPCYA---EHAHAWRRAGHQVRELDEAE---- 117 (330)
T ss_pred HHHHHHHHHHhCC--C--CEEECcCHHHHHHHHHH---ccCCCEEEEcCCChH---HHHHHHHHcCCeEEEechhh----
Confidence 4568999999985 4 79999999999998863 357899998875544 44455566799999998642
Q ss_pred cccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEE
Q 010538 167 DGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMV 246 (508)
Q Consensus 167 ~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~v 246 (508)
++ +++ ++++++++++++||||.+++.+++.++++ +|+++|++|
T Consensus 118 -------------------~~--~~~-------~~~~~v~l~nP~NPTG~~~s~~~l~~l~~---------~~~~~~~~i 160 (330)
T PRK05664 118 -------------------VE--AAL-------DSLDVLVVVNPNNPTGRRFDPARLLAWHA---------RLAARGGWL 160 (330)
T ss_pred -------------------Hh--hhh-------cCCCEEEEeCCcCCCCCccCHHHHHHHHH---------HHHhcCCEE
Confidence 12 221 24678888999999999999998888875 345589999
Q ss_pred EEeccccCCCCCCCCCCC---CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccC
Q 010538 247 LIDAAKGCVTQPPDLSKY---PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQG 321 (508)
Q Consensus 247 ivD~a~~~g~~~~d~~~~---~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (508)
|+|+++........+... +.-+++.|++|.|| .+| +||+++++++++.+......
T Consensus 161 I~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~g-l~GlRiG~~v~~~~l~~~~~~~~~~------------------- 220 (330)
T PRK05664 161 VVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFG-LAGARLGFVLAEPALLRALAELLGP------------------- 220 (330)
T ss_pred EEECCcccCCCcccccccccCCCEEEEeecccccc-CCCcceEEEEeCHHHHHHHHHhcCC-------------------
Confidence 999998643221222222 22388999999998 447 89999998887766543110
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 322 VEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 322 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
.+.+.....++..+++... ..+..++++.+.++++.+.|++. +++ +.+. ...+++
T Consensus 221 -------~~~~~~~~~~~~~~L~~~~--~~~~~~~~~~~~r~~l~~~L~~~-------~~~---~~~~------~~~f~~ 275 (330)
T PRK05664 221 -------WTVSGPTRWLAQAALADTP--WQRRQRERLLAASQRLAALLRRH-------GLT---PAGG------CALFQW 275 (330)
T ss_pred -------CCCCHHHHHHHHHHHhChH--HHHHHHHHHHHHHHHHHHHHHHC-------CCc---ccCC------cceEEE
Confidence 1122333344444444211 14567788888899999999876 342 2221 136677
Q ss_pred EEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC
Q 010538 402 FNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY 481 (508)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 481 (508)
+++++ ..++.+.|.++||.|+. |. ..+++|||++.
T Consensus 276 ~~~~~-------~~~~~~~l~~~gi~v~~---f~-----------------------------------~~~~iRis~~~ 310 (330)
T PRK05664 276 VRTED-------AAALHEFLARRGILTRL---FE-----------------------------------QPASLRFGLPA 310 (330)
T ss_pred EecCC-------HHHHHHHHHHCCeEEEE---CC-----------------------------------CCCeEEEECCC
Confidence 76532 23578889999999974 21 14689999995
Q ss_pred CCCHHHHHHHHHhhhhhhhh
Q 010538 482 MSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 482 ~~t~eev~~l~~~~~~~~~~ 501 (508)
+.++++++.++|+.+.+.
T Consensus 311 --~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 311 --DEADWARLDQALLAYRKE 328 (330)
T ss_pred --CHHHHHHHHHHHHHHHhh
Confidence 788999999999887653
No 199
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=4.7e-20 Score=191.20 Aligned_cols=337 Identities=15% Similarity=0.101 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~ 164 (508)
...++++.+|+++|++ .+++++|+|+|+.+++.++..++|++||+++..|+++..++ ...|++++.++++.+.
T Consensus 34 ~~~~le~~la~~~g~~----~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~---~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 34 KNQALEQAFCQLTGNQ----HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMI---VLLGATPVMVDVDRDT 106 (379)
T ss_pred hHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHH---HHcCCEEEEEecCCCc
Confidence 4688899999999985 36788999999999999986788999999998888775544 4469999999987533
Q ss_pred -CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 165 -DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 165 -~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
.+ |+++++ +++ +++|++|+.+ +++|...|+++|.++|++ +|
T Consensus 107 ~~~---------------d~~~l~--~~i------~~~tkav~~~---~~~G~~~d~~~i~~~a~~------------~g 148 (379)
T PRK11658 107 LMV---------------TPEAIE--AAI------TPRTKAIIPV---HYAGAPADLDAIRAIGER------------YG 148 (379)
T ss_pred CCc---------------CHHHHH--Hhc------ccCCeEEEEe---CCCCCcCCHHHHHHHHHH------------cC
Confidence 34 688888 554 5678888744 459999999999999998 99
Q ss_pred eEEEEeccccCCCCCC--CCCCCCCcEEEEeccccccCCCcceEEEEe-chhHhhhccccccCceEEecccchhhhhhcc
Q 010538 244 WMVLIDAAKGCVTQPP--DLSKYPVDFVVMSFYKIFGYPTGLGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~--d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
+++++|++|++|.... .+...+.+++.++.+|.+.++.| |+++.+ +++.+++++....|..... .. .+.....
T Consensus 149 i~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~~~~-~~--~~~~~~~ 224 (379)
T PRK11658 149 IPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLGVDA-FD--RQTQGRA 224 (379)
T ss_pred CeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCCcch-hh--hhcccCC
Confidence 9999999999887654 35556677778888886654443 666654 5666666654322211100 00 0000000
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCC-ce
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTG-SM 399 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 399 (508)
.....+..|+.. .+..+.+|+.+.+..+++++.++.+++++++.+.|++++ ...+..+... .+.. .+
T Consensus 225 ~~~~~~~~G~n~--~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~------~~~~~~~~~~----~~~~~~~ 292 (379)
T PRK11658 225 PQAEVLTPGYKY--NLADINAAIALVQLAKLEALNARRREIAARYLQALADLP------FQPLSLPAWP----HQHAWHL 292 (379)
T ss_pred Ccceeecccccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CccCcCCCCC----CceeEEE
Confidence 001112334311 134566677766666789999999999999999998762 2223222211 0112 44
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCC--ChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGL--SHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
..+.++.. ...++..++.+.|+++||.++.. |.+...++++.. +...+.. . .......+.+
T Consensus 293 ~~~~~~~~-~~~~~r~~~~~~L~~~gI~~~~~--~~~~~~~~~~~~~~~~~~~p~-~-------------~~~~~~~l~l 355 (379)
T PRK11658 293 FIIRVDEE-RCGISRDALMEALKERGIGTGLH--FRAAHTQKYYRERFPTLSLPN-T-------------EWNSERICSL 355 (379)
T ss_pred EEEEECCc-cccCCHHHHHHHHHHCCCCCccc--CcCcccChhhhccCCCCCChH-H-------------HHHHhCeEEc
Confidence 55565421 11134567899999999986643 322211111110 0000000 0 0112467888
Q ss_pred ecCCCCCHHHHHHHHHhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~ 499 (508)
-+|..-|++|++++++.+++++
T Consensus 356 P~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 356 PLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999865
No 200
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=1.5e-21 Score=195.65 Aligned_cols=231 Identities=18% Similarity=0.175 Sum_probs=174.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~ 162 (508)
...+.++++.+|+++|++. .+++|+|+|+|+..++.++ .++|++|+++...|+++...+.. .|++++.++.+.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~---~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~~~h~s~~~~~~~---~g~~~~~v~~~~ 130 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAV-CGPGDKILIDRNCHKSVINGLVL---SGAVPVYLKPER 130 (294)
T ss_pred ChHHHHHHHHHHHHhCCCC---EEEEcCcHHHHHHHHHHHc-CCCCCEEEEeCCchHHHHHHHHH---CCCEEEEecCcc
Confidence 3458889999999999863 3666999999999999998 68899999999999988766543 589999887653
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
+.... .....|+++++ +++++ .+++++|+++++ |++|.+.|+++|.++|++ +
T Consensus 131 ~~~~~---------~~~~i~~~~l~--~~l~~----~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~------------~ 182 (294)
T cd00615 131 NPYYG---------IAGGIPPETFK--KALIE----HPDAKAAVITNP-TYYGICYNLRKIVEEAHH------------R 182 (294)
T ss_pred CcccC---------cCCCCCHHHHH--HHHHh----CCCceEEEEECC-CCCCEecCHHHHHHHHHh------------c
Confidence 22100 00011688888 66532 357899999986 789999999999999998 9
Q ss_pred CeEEEEeccccC-----CCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhh
Q 010538 243 RWMVLIDAAKGC-----VTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 243 g~~vivD~a~~~-----g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
|++++||++|+. +..+.+....++|+++.|+||++++|++.|++.++++... .... .
T Consensus 183 g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~-~~~~----------------~- 244 (294)
T cd00615 183 GLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVN-PDRV----------------N- 244 (294)
T ss_pred CCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCC-HHHH----------------H-
Confidence 999999999975 3345555566899999999999887776788777665311 0000 0
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHh
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLL 370 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~ 370 (508)
.....+..++|++..++++..+++++...|. +..+++.++.+++++.+.
T Consensus 245 ---~~~~~~~ttsps~~~~asl~~a~~~~~~~g~-~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 245 ---EALNLHQSTSPSYLILASLDVARAMMALEGK-ELVEELIELALYARQEIN 293 (294)
T ss_pred ---HHHHHHCCCCcHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHh
Confidence 0133456788999999999999998876664 467788899999988875
No 201
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=7.4e-20 Score=189.65 Aligned_cols=315 Identities=13% Similarity=0.060 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+.+++++|++.|. + ++++++|+++|+.+++.++ .++|++|+++...|++..... ......|+++..++.
T Consensus 52 pt~~~L~~~lA~l~g~--~--~~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-- 124 (386)
T PRK08045 52 PTRDVVQRALAELEGG--A--GAVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ-- 124 (386)
T ss_pred ccHHHHHHHHHHHhCC--C--eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC--
Confidence 3467789999999995 3 5899999999999999988 688999999998888655443 344455667777642
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
. |+++++ +++ .++|++|++++++||||.++|+++|.++|++ +
T Consensus 125 ---~---------------d~e~l~--~~l------~~~tklV~l~sP~NPtG~v~di~~I~~ia~~------------~ 166 (386)
T PRK08045 125 ---G---------------DEQALR--AAL------AEKPKLVLVESPSNPLLRVVDIAKICHLARE------------A 166 (386)
T ss_pred ---C---------------CHHHHH--Hhc------ccCCeEEEEECCCCCCCEecCHHHHHHHHHH------------c
Confidence 2 466777 444 4678999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.+.....+ ..++|+++.|+||+++|+.+ .|+++.+ +++.+++...
T Consensus 167 g~~vivDeay~~~~~~~pl-~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~-------------------- 225 (386)
T PRK08045 167 GAVSVVDNTFLSPALQNPL-ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-------------------- 225 (386)
T ss_pred CCEEEEECCCCccccCCch-hhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH--------------------
Confidence 9999999999877544333 45899999999999987876 5777764 4444433211
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCC-----c--
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSE-----V-- 391 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~-----~-- 391 (508)
.. ....+.+....+.+..+++. +..+.++..+.+..+.+.|++.+ .+ +++-|.-.. .
T Consensus 226 ---~~-~~g~~~~p~~~~l~~rgl~t-----l~~R~~~~~~na~~la~~L~~~p------~v~~V~yp~l~~~p~~~~~~ 290 (386)
T PRK08045 226 ---AN-NIGVTGGAFDSYLLLRGLRT-----LVPRMELAQRNAQAIVKYLQTQP------LVKKLYHPSLPENQGHEIAA 290 (386)
T ss_pred ---HH-hcCCCCCHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHcCC------CEeEEECCCCCCCcCHHHHH
Confidence 00 11122333333333334443 56677888888888888888763 44 333332110 0
Q ss_pred c-cCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhh----hhhhhcCCccCCCccc
Q 010538 392 S-YHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDL----LSNIEAGHVCWDDNDI 466 (508)
Q Consensus 392 ~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~----~~~~~~~~~~~~~~~~ 466 (508)
. ...-+++++|.+++. ... ...+...|+--.+.++-|...+.- .+++. ..++.+ .+.+|
T Consensus 291 ~~~~g~g~~~s~~~~~~-~~~--~~~f~~~l~~~~~~~s~G~~~sl~-~~~~~-~~~~~~~~~~~~~~g----------- 354 (386)
T PRK08045 291 RQQKGFGAMLSFELDGD-EQT--LRRFLGGLSLFTLAESLGGVESLI-SHAAT-MTHAGMAPEARAAAG----------- 354 (386)
T ss_pred HhCCCCCceEEEEecCc-HHH--HHHHHHhccceeEeccCCCCceeE-eCCCC-cccccCCHHHHHhcC-----------
Confidence 0 001278999999642 111 123444554444445544322110 00000 011111 11232
Q ss_pred cCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 467 IHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 467 ~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
..++.||+|++.-+-++=++.+.++|...
T Consensus 355 ---i~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 355 ---ISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred ---CCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 24789999999876666666666665543
No 202
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.87 E-value=1e-19 Score=191.22 Aligned_cols=311 Identities=13% Similarity=0.043 Sum_probs=190.8
Q ss_pred HHHHHHHHHHc----C--CCCCCceEEEcCChHHHHHHHHhhcCC----CCCCeEEE-ecccccchHHHHHHHH-hcCCe
Q 010538 87 RAAREQVLDYF----N--ASMKDYKCIFTSGATAALKLVGEAFPW----SHQSSYMY-TMENHNSVLGIREYAL-SQGAA 154 (508)
Q Consensus 87 ~~~r~~la~~~----~--~~~~~~~i~~t~g~t~al~~~~~~l~~----~~g~~vl~-~~~~h~s~~~~~~~~~-~~G~~ 154 (508)
..+|+++|+++ | ++++ +|++|+|+++|+.+++.++.. .+|+.|++ ....||.+........ ..+..
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~--~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~ 154 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQ--NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYR 154 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChh--hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecc
Confidence 44566666655 3 6777 899999999999999998843 25788888 5777777655332211 01122
Q ss_pred EEEEccCCc---cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCc
Q 010538 155 AFAIDVEEA---VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPE 231 (508)
Q Consensus 155 v~~v~~~~~---~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~ 231 (508)
+..++++.+ ..+ |+++++ . .++++++++++++||||.+++.+++.++++
T Consensus 155 ~~~~~~~~~~~~~~~---------------d~~~l~--------~--~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~--- 206 (416)
T PRK09440 155 PNIELLPEGQFKYHV---------------DFEHLH--------I--DEDTGAICVSRPTNPTGNVLTDEELEKLDA--- 206 (416)
T ss_pred cccccccccccccCC---------------CHHHcc--------c--CCCceEEEEecCCCCCCccCCHHHHHHHHH---
Confidence 222333221 122 455554 1 346799999999999999999887777776
Q ss_pred cccccCCCCCCCeEEEEeccccCCCCCC---CCCC--CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCc
Q 010538 232 RILEISPFSKGRWMVLIDAAKGCVTQPP---DLSK--YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGG 304 (508)
Q Consensus 232 ~~~~~~~~~~~g~~vivD~a~~~g~~~~---d~~~--~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~ 304 (508)
+|++++++||+|++++.....+ +... .+.-+++.|++|+ + .+| +||+++++++++.+.....
T Consensus 207 ------~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~-~pGlRiG~~i~~~~l~~~~~~~~~--- 275 (416)
T PRK09440 207 ------LARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-G-LPGVRCGIVIADEEIIEALSNMNG--- 275 (416)
T ss_pred ------HHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-C-CCcceEEEEeCCHHHHHHHHHHHH---
Confidence 5666999999999996422111 1111 1234788999996 5 347 8999999888776554311
Q ss_pred eEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH--HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE
Q 010538 305 TVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL--INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT 382 (508)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~--~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~ 382 (508)
....+.+.....++..+++- +.+.-.+.+++.+++.++.+.+.|.+... ..++.
T Consensus 276 ---------------------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~---~~~~~ 331 (416)
T PRK09440 276 ---------------------IISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLP---DEPCL 331 (416)
T ss_pred ---------------------HhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCeE
Confidence 11122333333333334331 00100122445555666666666654310 01355
Q ss_pred EecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCC
Q 010538 383 IYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWD 462 (508)
Q Consensus 383 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 462 (508)
+..|.+ +.++|+.++... ++..++.+.|.++||.+++|..|..+... +
T Consensus 332 ~~~p~g--------g~fiw~~~~~~~---~~~~~~~~~l~~~gV~v~pg~~F~~~~~~-------------------~-- 379 (416)
T PRK09440 332 IHKPEG--------AIFLWLWFKDLP---ITTEELYQRLKARGVLVVPGHYFFPGLDE-------------------D-- 379 (416)
T ss_pred EecCCC--------ceEEEEECCCCC---CCHHHHHHHHHHCCEEEechHhhCCCCcc-------------------c--
Confidence 554543 788999886521 23345778888999999998766432100 0
Q ss_pred CccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 463 DNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 463 ~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.....+++|||++. +.++++.+++.|+++++-
T Consensus 380 -----~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 380 -----WPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEK 411 (416)
T ss_pred -----cCCcCceEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 00013689999984 789999999999987754
No 203
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.87 E-value=2.4e-19 Score=188.13 Aligned_cols=213 Identities=15% Similarity=0.191 Sum_probs=157.1
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.+.+|++|.+.+++++.+++++.+.+ .. +.+.......+. ....++.+++.+++++|++.. ++ ++|++.|+++
T Consensus 80 tg~v~~tNlg~s~l~~~vieAv~~~~-~~-y~~l~~~l~~g~-~g~r~~~le~~lA~l~gae~a---lv-v~sg~aAi~l 152 (454)
T TIGR00474 80 TGVVLHTNLGRAPLAEEAIEAVTDAA-RG-YSNLEYDLETGK-RGSRYSHVEGLLCELTGAEDA---LV-VNNNAAAVLL 152 (454)
T ss_pred CCcEEeccCCCCCCCHHHHHHHHHHH-hc-ccchhccccccc-cchHHHHHHHHHHHHhCCCcE---EE-ECCHHHHHHH
Confidence 56899999999999999999876543 33 333321111111 234578899999999999754 44 5667778988
Q ss_pred HHhhcCCCCCCeEEEecccccch---HHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSV---LGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~---~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
++.++ .+|++||+++.+|+.+ ......++..|+++++++.+.. . ++++++ +++
T Consensus 153 ~l~~l--~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~--~---------------~l~dle--~aI--- 208 (454)
T TIGR00474 153 ALNTL--AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNR--T---------------HLKDYE--DAI--- 208 (454)
T ss_pred HHHHh--CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCC--C---------------CHHHHH--Hhc---
Confidence 88664 7899999999887533 2223445678999999976432 2 367778 444
Q ss_pred CCCCCCceEEEEeCCCCCC--c--cccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc---------CCCCCC--C
Q 010538 196 DPAGDAYNLFAFPSECNFS--G--SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG---------CVTQPP--D 260 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~t--G--~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~---------~g~~~~--d 260 (508)
+++|++|++.|.+|++ | .+.|+++|.++||+ +|+++++|.+.+ .+..|. +
T Consensus 209 ---~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~------------~g~~vivD~~sG~l~~~~~~gl~~~p~~~~ 273 (454)
T TIGR00474 209 ---TENTALLLKVHTSNYRIVGFTEEVSIAELVALGRE------------HGLPVMEDLGSGSLVDLSRYGLPDEPTVQE 273 (454)
T ss_pred ---CcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHH------------cCCeEEEECCCcccccchhccCCCCccccc
Confidence 6789999999999985 6 58999999999998 999999998632 223333 4
Q ss_pred CCCCCCcEEEEeccccccCCCcceEEEEechhHhhhcc
Q 010538 261 LSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKN 298 (508)
Q Consensus 261 ~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~ 298 (508)
..++++|++++|+|||+|||. .|+++++++.+++++.
T Consensus 274 ~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 274 VIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIERLKK 310 (454)
T ss_pred HhHcCCCEEEecCccccCCCe-EEEEEECHHHHHhhhh
Confidence 456799999999999998786 6999999988776553
No 204
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=1.1e-19 Score=187.82 Aligned_cols=311 Identities=11% Similarity=0.032 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEA 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~ 163 (508)
....+++.+|++.|++ .+++++|+++|+.+++.++ .++|++||+++..|++...+.. .++..|+++..++...
T Consensus 51 t~~~lE~~lA~l~g~~----~~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~- 124 (377)
T TIGR01324 51 THFALQDAMCELEGGA----GCYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLI- 124 (377)
T ss_pred cHHHHHHHHHHHhCCC----cEEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCC-
Confidence 3567889999999975 4788999999999999998 7899999999877766554443 3566788888775421
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
.++++ +++ +++|++|++++++|++|.+.|+++|.++|++ +|
T Consensus 125 -------------------~e~l~--~~i------~~~tklV~lesp~Np~g~~~dl~~I~~la~~------------~g 165 (377)
T TIGR01324 125 -------------------GEDIA--TLI------QPNTKVLFLEAPSSITFEIQDIPAIAKAARN------------PG 165 (377)
T ss_pred -------------------HHHHH--Hhc------CCCceEEEEECCCCCCCcHHHHHHHHHHHHH------------cC
Confidence 24556 443 5689999999999999999999999999998 89
Q ss_pred eEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccC
Q 010538 244 WMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQG 321 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (508)
+++++|++|+.|... ...++++|+++.|++|+++|+.+ .|+++.+++..+++....
T Consensus 166 ~~livD~t~a~g~~~-~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~--------------------- 223 (377)
T TIGR01324 166 IVIMIDNTWAAGLLF-KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHS--------------------- 223 (377)
T ss_pred CEEEEECCCcccccc-CccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHH---------------------
Confidence 999999999988763 33456899999999999997765 577877777655443210
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCccc-------
Q 010538 322 VEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSY------- 393 (508)
Q Consensus 322 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~------- 393 (508)
+....+.+....+.+..+++. +..+.++..+.+..+.+.|++.+ .+ +++-|.-.. .+
T Consensus 224 ---~~~G~~l~p~~a~~~~rgl~t-----l~~R~~~~~~~a~~la~~L~~~p------~v~~v~yp~l~~-~p~~~~~~~ 288 (377)
T TIGR01324 224 ---YLMGQMVDADDAYTTLRGLRT-----LGVRLKQHQESSLAIAKWLSEQP------EVARVLHPALPS-CPGHEFWKR 288 (377)
T ss_pred ---HHhCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHhCC------CcCEEECCCCCC-CccHHHHHH
Confidence 011123344444444444443 33445666666667777777653 33 344332100 00
Q ss_pred --CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHH-HhhcCCChhhhhhhhhcCCccCCCccccCCC
Q 010538 394 --HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGAC-AKYLGLSHSDLLSNIEAGHVCWDDNDIIHGK 470 (508)
Q Consensus 394 --~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 470 (508)
...+++++|.+++.... ...++.+.|+..++.++-|...+.-.+ ++ -..++.. ...| .
T Consensus 289 ~~~~~g~~~s~~l~~~~~~--~~~~~~~~l~~~~~~~slG~~~sl~~~~~~--~~~~~~~-~~~~--------------~ 349 (377)
T TIGR01324 289 DFSGSSGLFSFVLQRLTQK--QVHAFLDHLQLFGLGYSWGGYESLALCNQP--ELGHRPN-IKRN--------------L 349 (377)
T ss_pred hccCCCceEEEEECCCCHH--HHHHHHHhCCcceEeccCCCccceeecCCC--CCCHHHH-Hhcc--------------C
Confidence 01378999999742211 123466777777777777743222100 00 0011111 1111 2
Q ss_pred CCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 471 PTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 471 ~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
.++.||+|++.-+.+|=++.|.++|.
T Consensus 350 ~~~liR~svGlE~~~dl~~dl~~al~ 375 (377)
T TIGR01324 350 EGPLIRVHIGLENVDDLKADLKAGFE 375 (377)
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHHh
Confidence 35789999998665555555555544
No 205
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.86 E-value=2.2e-20 Score=192.36 Aligned_cols=319 Identities=15% Similarity=0.100 Sum_probs=208.1
Q ss_pred HHHHHhhccCC--CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCC---
Q 010538 28 QIRATEFKRLE--NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMK--- 102 (508)
Q Consensus 28 ~~r~~~f~~~~--~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--- 102 (508)
.+++..+|... ...-|+.+-..++.++.++..++...+.. |. ..+..++....+..++.+++++++|.+..
T Consensus 25 ~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~---n~-~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~ 100 (373)
T PF00282_consen 25 DLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQ---NG-FTWEASPAATEIEREVIRWLADLFGLPESFTF 100 (373)
T ss_dssp HHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT----BT-TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTS
T ss_pred HHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcc---cc-cccccccccccchHHHHHHHHHHhCCcccccc
Confidence 45543355553 33568888777776766666665544421 22 22334555677888899999999999821
Q ss_pred --CceEEEcCChHHHHHHHHhhcCC-------------CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcc
Q 010538 103 --DYKCIFTSGATAALKLVGEAFPW-------------SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDND 167 (508)
Q Consensus 103 --~~~i~~t~g~t~al~~~~~~l~~-------------~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~ 167 (508)
+-.-++|+|+|+++..++.+... .+.-+|++++..|+|+....+++ |+.++.||.++++.+
T Consensus 101 ~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l---Glg~~~I~~~~~~~m- 176 (373)
T PF00282_consen 101 SKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL---GLGVRKIPTDEDGRM- 176 (373)
T ss_dssp TTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT---TSEEEEE-BBTTSSB-
T ss_pred cCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee---eeEEEEecCCcchhh-
Confidence 01579999999998766544311 11236888888999887766654 899999999988877
Q ss_pred ccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEE
Q 010538 168 GLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVL 247 (508)
Q Consensus 168 ~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vi 247 (508)
|+++++ ++|++....+..+-+|+.+..++.+|.+.|+++|.++|++ +++|++
T Consensus 177 --------------d~~~L~--~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~------------~~~wlH 228 (373)
T PF00282_consen 177 --------------DIEALE--KALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK------------YNIWLH 228 (373)
T ss_dssp ---------------HHHHH--HHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH------------CT-EEE
T ss_pred --------------hHHHhh--hhhcccccccccceeeeccCCCcccccccCHHHHhhhccc------------cceeee
Confidence 567776 5543221122234578889999999999999999999998 999999
Q ss_pred EeccccCCCCC------CCCCCCCCcEEEEeccccccCCCcceEEEEechhH-hh-h--ccccccCceEEecccchhhhh
Q 010538 248 IDAAKGCVTQP------PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAA-KL-L--KNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 248 vD~a~~~g~~~------~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~-~~-l--~~~~~g~~~~~~~~~~~~~~~ 317 (508)
||++++....- ....-..+|.++.++|||++.|.++|+++++++.. .. + .+.+.+.... .....+
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~---~~~~~~-- 303 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDR---ESDESY-- 303 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-S---SS-GGG--
T ss_pred ecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccc---cccccc--
Confidence 99998763221 11222268999999999999899999999998642 21 1 1111110000 000000
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTG 397 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (508)
......-.++. -...+.++.+++.+...|+.++.++..+++++|.+.|++. ++++++.++. .
T Consensus 304 ---~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~------~~~el~~~~~--------~ 365 (373)
T PF00282_consen 304 ---DYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD------PRFELVNEPD--------L 365 (373)
T ss_dssp ---CEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS------TTEEESSTTS--------S
T ss_pred ---ccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC------CCEEEEcCCC--------c
Confidence 00111112333 3345677788888888899999999999999999999998 4699998765 7
Q ss_pred ceEEEEee
Q 010538 398 SMVSFNLK 405 (508)
Q Consensus 398 ~~v~~~~~ 405 (508)
++|+|+.+
T Consensus 366 ~~vcFr~k 373 (373)
T PF00282_consen 366 NIVCFRYK 373 (373)
T ss_dssp SEEEEEES
T ss_pred eEEEEEeC
Confidence 99999864
No 206
>PRK04311 selenocysteine synthase; Provisional
Probab=99.86 E-value=4.6e-19 Score=186.53 Aligned_cols=211 Identities=18% Similarity=0.224 Sum_probs=155.7
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.+.+|++|.+.+++++.+++++.+. ... +.+.......+ .....++.+++.+++++|++. .+++++++.|+.+
T Consensus 85 tg~v~~tNlg~s~l~~~v~eav~~~-~~~-~~~le~~l~~g-~~g~r~~~~e~~lA~l~Gae~----a~vv~sgtaAl~l 157 (464)
T PRK04311 85 TGVVLHTNLGRALLSEAAIEAVTEA-ARG-YSNLEYDLATG-KRGSRDRALAALLCALTGAED----ALVVNNNAAAVLL 157 (464)
T ss_pred CccEEeccCCCCCCCHHHHHHHHHH-Hhc-ccccccchhhc-ccchHHHHHHHHHHHHhCCCe----EEEECCHHHHHHH
Confidence 6788899999999999999987653 333 22222111111 123457789999999999873 4566777789999
Q ss_pred HHhhcCCCCCCeEEEecccccch---HHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSV---LGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~---~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
++.++ .+|++||+++.+|+.+ ..+...++..|+++++++.+.. . ++++++ ++|
T Consensus 158 ~l~~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~--t---------------~~~dle--~aI--- 213 (464)
T PRK04311 158 ALNAL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNR--T---------------HLRDYE--QAI--- 213 (464)
T ss_pred HHHHh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCC--C---------------CHHHHH--Hhc---
Confidence 88775 6889999998877643 2233445678999999976432 2 367778 554
Q ss_pred CCCCCCceEEEEeCCCCC--Cc--cccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---------CCCCCCCC
Q 010538 196 DPAGDAYNLFAFPSECNF--SG--SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC---------VTQPPDLS 262 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~--tG--~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~---------g~~~~d~~ 262 (508)
+++|++|++.|.+|+ +| ...|+++|.++||+ +|+++++|++++. +..| ++.
T Consensus 214 ---~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~------------~gi~vivD~gsG~l~~~~~~gl~~~p-~~~ 277 (464)
T PRK04311 214 ---NENTALLLKVHTSNYRIEGFTKEVSLAELAALGKE------------HGLPVVYDLGSGSLVDLSQYGLPDEP-TVQ 277 (464)
T ss_pred ---CccCeEEEEEcCCCccccccCCcCCHHHHHHHHHH------------cCCeEEEECCCcccccchhccCCCCC-chh
Confidence 578999999999997 34 67899999999998 9999999985421 1222 332
Q ss_pred ---CCCCcEEEEeccccccCCCcceEEEEechhHhhhc
Q 010538 263 ---KYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLK 297 (508)
Q Consensus 263 ---~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~ 297 (508)
++++|++++|+||++|||. .|+++++++++++++
T Consensus 278 ~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~~li~~l~ 314 (464)
T PRK04311 278 ELLAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIARLK 314 (464)
T ss_pred hHHhcCCcEEEecCcccccCCc-eEEEEEcHHHHHHHh
Confidence 4699999999999999885 799999999887665
No 207
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=7.8e-20 Score=188.94 Aligned_cols=217 Identities=14% Similarity=0.065 Sum_probs=158.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEcc
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDV 160 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~ 160 (508)
.....+++++.+++++|.+. .++++++++|+.+++.++ .++|++|+++...|.+...... .++..|+++..++.
T Consensus 38 ~~p~~~~le~~la~l~g~~~----a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEA----ALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred CChhHHHHHHHHHHHHCCCC----EEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 34567888999999999753 466677789999999998 6889999999888877665443 45667999988876
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+ ++++++ +++ .+++++|++.+++||+|.+.|+++|.++|++
T Consensus 113 ~--------------------d~~~l~--~~i------~~~~~~v~~e~~~np~g~~~dl~~i~~la~~----------- 153 (369)
T cd00614 113 D--------------------DPEALE--AAI------KPETKLVYVESPTNPTLKVVDIEAIAELAHE----------- 153 (369)
T ss_pred C--------------------CHHHHH--Hhc------CCCCeEEEEECCCCCCCeecCHHHHHHHHHH-----------
Confidence 4 245666 444 3578999999999999999999999999998
Q ss_pred CCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec-hhHhhhccccccCceEEecccchhhhh
Q 010538 241 KGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
+|+++++|++++.+... ...+.++|+++.|++|+++++.. .|+++.++ +++++++....
T Consensus 154 -~g~~livD~t~~~~~~~-~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~---------------- 215 (369)
T cd00614 154 -HGALLVVDNTFATPYLQ-RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL---------------- 215 (369)
T ss_pred -cCCEEEEECCCcchhcC-ChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH----------------
Confidence 99999999999877542 22245799999999999985542 58888877 66665543311
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
...++.+....+.+..+++ .+..+.++..++++++.+.|++.+
T Consensus 216 --------~~g~~~~p~~a~~~l~~l~-----tl~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 216 --------ALGTILSPFDAWLLLRGLK-----TLPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred --------hhCCCCCHHHHHHHHcCCC-----CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0112223222222222222 356667888889999999998874
No 208
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=6.1e-20 Score=189.80 Aligned_cols=313 Identities=10% Similarity=0.019 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~~~ 164 (508)
...+++.+|++.+.. ++++++|+++|+.+++.++ +++|++||++...|++..... ..+.+.|+++..++.+.
T Consensus 63 ~~~Le~~iA~le~~~----~~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~-- 135 (394)
T PRK09028 63 HFAFQAAIVELEGGA----GTALYPSGAAAISNALLSF-LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMI-- 135 (394)
T ss_pred HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCC--
Confidence 557889999998764 4789999999999999998 789999999988886665533 34566899988876431
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
.+.++ +++ +++|++|++++++||||.+.|+++|.++||+ +|+
T Consensus 136 ------------------~e~l~--~~l------~~~TklV~lespsNPtg~v~dl~~I~~la~~------------~g~ 177 (394)
T PRK09028 136 ------------------GEGIR--ELI------RPNTKVLFLESPGSITMEVQDVPTLSRIAHE------------HDI 177 (394)
T ss_pred ------------------HHHHH--Hhc------CcCceEEEEECCCCCCCcHHHHHHHHHHHHH------------cCC
Confidence 34456 443 5689999999999999999999999999998 999
Q ss_pred EEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 245 MVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 245 ~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
++++|.+++.+.. .+..++|+|+++.|+|||++|+.. .|+++.+++..+.+...
T Consensus 178 ~lvvD~t~a~p~~-~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~----------------------- 233 (394)
T PRK09028 178 VVMLDNTWASPIN-SRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREH----------------------- 233 (394)
T ss_pred EEEEECCcccccc-CCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHH-----------------------
Confidence 9999999988742 333467899999999999987855 46665555554433311
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCccc--------
Q 010538 323 EELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSY-------- 393 (508)
Q Consensus 323 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~-------- 393 (508)
.....++.+....+.+...++. +..+.++..+.+..+.+.|++.+ .+ +++-|.-. ..+
T Consensus 234 -~~~~G~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p------~v~~V~yPgl~-s~p~~~~~~~~ 300 (394)
T PRK09028 234 -SYLMGQCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRP------EVDHVRHPAFE-TCPGHEFFKRD 300 (394)
T ss_pred -HHhcCCCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCC------CccEEECCCCC-CCccHHHHHHh
Confidence 0011223333334433334333 46667777888888888888764 34 34333210 000
Q ss_pred -CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCC
Q 010538 394 -HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPT 472 (508)
Q Consensus 394 -~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 472 (508)
..-+++++|.+++.+... ...+.+.|+-..+.++-|...+.-. +++ ...+....+.. +..+
T Consensus 301 ~~g~gg~~sf~l~~~~~~~--~~~f~~~l~l~~~~~slG~~~sLv~-~p~-~~~~~~~~~~~--------------~~~~ 362 (394)
T PRK09028 301 FSGSNGLFSFVLKQGDPKA--VTALVEGMQHFKMGFSWGGFESLIL-GVF-GINKLRTATNW--------------DFSK 362 (394)
T ss_pred ccCCCceEEEEECCCCHHH--HHHHHHhCCcceEecccCCCcceeE-CCC-CcCccCchhhh--------------cCCC
Confidence 012789999996422111 1234444443444455443222110 000 00000000111 2235
Q ss_pred ceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 473 GAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 473 ~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
+.||+|++.-+.+|=++.+.+++..|
T Consensus 363 ~liR~svGlEd~~dLi~Dl~~Al~~~ 388 (394)
T PRK09028 363 PLIRLHIGLEDVDDLIADLEAGFERY 388 (394)
T ss_pred CeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 78999999877666666666666644
No 209
>PRK08354 putative aminotransferase; Provisional
Probab=99.86 E-value=2.4e-19 Score=181.04 Aligned_cols=300 Identities=13% Similarity=0.082 Sum_probs=188.3
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.+++.|+.+-...+|+.+++++.+. .... ..|+. ...++++++++++ + +|++|+|+++++.+
T Consensus 8 ~~~i~l~~~~np~~p~~~~~a~~~~-~~~~-----~~yp~-------~~~l~~~ia~~~~---~--~I~vt~G~~~al~~ 69 (311)
T PRK08354 8 EGLIDFSASVNPYPPEWLDEMFERA-KEIS-----GRYTY-------YEWLEEEFSKLFG---E--PIVITAGITEALYL 69 (311)
T ss_pred cceeEecCCCCCCCCHHHHHHHHHH-HHHh-----hcCCC-------hHHHHHHHHHHHC---C--CEEECCCHHHHHHH
Confidence 4678888776655566666665433 2211 12221 3457889999998 3 69999999999998
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA 198 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~ 198 (508)
++..+ .+|+.|+++...|+.+. ..++..|.+++.++. |++.++ +.+
T Consensus 70 ~~~~~--~~gd~vlv~~P~y~~~~---~~~~~~g~~~~~~~~---------------------d~~~l~--~~~------ 115 (311)
T PRK08354 70 IGILA--LRDRKVIIPRHTYGEYE---RVARFFAARIIKGPN---------------------DPEKLE--ELV------ 115 (311)
T ss_pred HHHhh--CCCCeEEEeCCCcHHHH---HHHHHcCCEEeecCC---------------------CHHHHH--Hhh------
Confidence 88654 37899998886665554 444556988876643 356666 443
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccccc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFG 278 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g 278 (508)
. +++++++++++||||.+++.+++.++++ +|+++|+++|+|+++..-...-.....+..+++.|++|.|+
T Consensus 116 ~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~---------~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~ 185 (311)
T PRK08354 116 E-RNSVVFFCNPNNPDGKFYNFKELKPLLD---------AVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYG 185 (311)
T ss_pred c-CCCEEEEecCCCCCCCccCHHHHHHHHH---------HhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcC
Confidence 1 3578889999999999999999988887 56679999999999853211101111234588899999999
Q ss_pred CCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHH
Q 010538 279 YPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICR 356 (508)
Q Consensus 279 ~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~ 356 (508)
.+| +||+++ ..+.++.... ..+.+..+..++. .++. .+.+
T Consensus 186 -l~GlRiG~~v~---~~~~l~~~~~--------------------------~~~~~~~~~~~~~---~~~~-~~~~---- 227 (311)
T PRK08354 186 -LPGIRVGYVKG---FEEAFRSVRM--------------------------PWSIGSTGYAFLE---FLIE-DDFE---- 227 (311)
T ss_pred -Cccceeeeeee---hHHHHHHcCC--------------------------CccCCHHHHHHHH---HHHH-hHHH----
Confidence 557 799998 3233332210 0112222222222 2221 1122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCc
Q 010538 357 HIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNP 436 (508)
Q Consensus 357 ~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~ 436 (508)
++.+..+++++..+.+. +.... ++. ++++++.+.+ ..++.+.|.++||.+++|..+.
T Consensus 228 ~~~~~~~~~~~~~~~l~------~~l~~-~~~--------~~~~~~~~~~-------~~~~~~~l~~~gv~v~~g~~f~- 284 (311)
T PRK08354 228 HLRKTMPLIWREKERFE------KALYV-KSD--------ANFFIKDVGD-------AEKFVEFLKRNGILVRDCTSFG- 284 (311)
T ss_pred HHHHHHHHHHHHHHHHH------HhcCC-CCC--------CcEEEEECCC-------HHHHHHHHHHCCeEEEecccCC-
Confidence 22333344444443331 11111 222 5666655432 2347888899999999986541
Q ss_pred hHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 437 GACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 437 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.++++||+++ +.++.++++++++++
T Consensus 285 ----------------------------------~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 285 ----------------------------------LPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred ----------------------------------CCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 1478999999 888899999998875
No 210
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.9e-20 Score=182.81 Aligned_cols=348 Identities=17% Similarity=0.106 Sum_probs=256.7
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t~g~t~a 115 (508)
...|-|= ++-...++.|++++-..+ .+.| +.|+..|+.|.+..+.+|. +.+...++||++.. +|--.|| +.|
T Consensus 26 ~~~ieLI-ASEN~~S~aV~~A~gS~l-tnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~a--nVQPhSG-s~A 100 (413)
T COG0112 26 REHIELI-ASENFTSPAVMEAQGSDL-TNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYA--NVQPHSG-SQA 100 (413)
T ss_pred hhceeee-eccccCCHHHHHHHhhhh-hhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcc--ccCCCCc-hHH
Confidence 4555554 667778999999876554 4544 6788888888887777776 88889999999877 5665555 559
Q ss_pred HHHHHhhcCCCCCCeEEEecccccchHHH---HHHHHhcCCeEEEEccCC-ccCccccccccccccccccchhhhhcCCC
Q 010538 116 LKLVGEAFPWSHQSSYMYTMENHNSVLGI---REYALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~~h~s~~~~---~~~~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+..++.++ .++||.|+-.+..|...+.- ..+.... .++...+++. ++.+ |.++++ +.
T Consensus 101 N~av~~Al-l~pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~I---------------DyD~~~--k~ 161 (413)
T COG0112 101 NQAVYLAL-LQPGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLI---------------DYDEVE--KL 161 (413)
T ss_pred HHHHHHHH-cCCCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCcc---------------CHHHHH--HH
Confidence 99999998 79999999888777654421 2222222 4555556664 3555 678887 33
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-----CCCCCCCCCCCC
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-----VTQPPDLSKYPV 266 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-----g~~~~d~~~~~~ 266 (508)
.. ..++|+++.- .+..-...|.+++.++|++ .|+++++|.+|-. |.-|-++.. +
T Consensus 162 a~-----e~kPK~ii~G--~SaY~r~id~~~~reIad~------------VGA~L~~DmAHiaGLVA~G~~p~P~~~--A 220 (413)
T COG0112 162 AK-----EVKPKLIIAG--GSAYSRPIDFKRFREIADE------------VGAYLMVDMAHVAGLIAGGVHPNPLPH--A 220 (413)
T ss_pred HH-----HhCCCEEEEC--ccccccccCHHHHHHHHHH------------hCceEEehHHHHHHHHhcccCCCCCCc--c
Confidence 32 3467888754 3445678999999999998 8999999999965 455555554 9
Q ss_pred cEEEEeccccccCCCcceEEEEec-hhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTGLGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
|++++|+||+|.||+| |+++.++ ++.+++...+|.|.+ |.|....+++...|++.
T Consensus 221 dvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~q-----------------------ggpl~HviAakaVa~~E 276 (413)
T COG0112 221 DVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGLQ-----------------------GGPLMHVIAAKAVAFKE 276 (413)
T ss_pred ceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCccC-----------------------CChHHHHHHHHHHHHHH
Confidence 9999999998888998 8888886 777777776665533 56777889999999998
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 346 INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 346 ~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
..+-+++..++++.++++.|.+.|.+. |+++++..+. .+++.+++... .++.++..+.|.+.|
T Consensus 277 al~p~fk~Ya~qVv~NAkaLAe~l~~~-------G~~vvsGgTd-------nHl~lVDl~~~---~~~Gk~ae~~L~~~~ 339 (413)
T COG0112 277 ALEPEFKEYAKQVVKNAKALAEALKER-------GFKVVSGGTD-------NHLVLVDLRSK---GLTGKKAEAALERAG 339 (413)
T ss_pred HcChhHHHHHHHHHHHHHHHHHHHHHc-------CCeEecCCcc-------ceEEEEEcccC---CCCHHHHHHHHHHcC
Confidence 888889999999999999999999986 8999986554 78888888622 144456899999999
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC----CHHHHHHHHHhhhhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS----TFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~----t~eev~~l~~~~~~~~~~ 501 (508)
|.+.--... ||+++ ...+..|||..-..+ .++|++.+.+.|.+.++.
T Consensus 340 It~NKN~iP--------------------------~D~~~---p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 340 ITVNKNAIP--------------------------FDPES---PFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred EeeccCCCC--------------------------CCCCC---CCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 997543221 22222 123678999865443 578888888888877654
No 211
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.86 E-value=4.1e-20 Score=196.18 Aligned_cols=373 Identities=14% Similarity=0.105 Sum_probs=213.6
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHH-HHHHHHcC---CCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAR-EQVLDYFN---ASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~la~~~~---~~~~~~~i~~t~g~t~ 114 (508)
++.+.|.-+-.+..++..+.++.+......|..|.. .....+++. +.+.+.++ .++++++|++|+|+++
T Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~Y~~p~g-------~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 94 RDIISYVIDQLGFDPDAFLYEMCDGIIGDNYPVPDR-------MLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHhhcCCCCCCCC-------CHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 446666666656666677777666543322211211 122333333 34444333 2332236999999999
Q ss_pred HHHHHHhhc----CCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCC
Q 010538 115 ALKLVGEAF----PWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 115 al~~~~~~l----~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
|+..++.++ ...+|++|++....|+.+....++. ..|++++.++.+....- . ....+.|.+.++ +
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~-~~g~~vv~i~~~~~~~~-g-------~~~~~~d~~~l~--~ 235 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELP-RYDFEVVRIKADEMTED-G-------THTWQYPDKELE--K 235 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHh-cCCcEEEEeeccccccc-c-------cccCCCCHHHHH--H
Confidence 999988772 2688999999987777766554432 34778888877532110 0 000123678888 4
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC--CeEEEEeccccCCC-CCCCCCCC--C
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG--RWMVLIDAAKGCVT-QPPDLSKY--P 265 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~--g~~vivD~a~~~g~-~~~d~~~~--~ 265 (508)
+ .+++++++++++++||||.+++.+++.++++ +|+++ +++||+|.+++.-. ...++... +
T Consensus 236 ~------~~~~~kai~l~nP~NPTG~vls~e~l~~I~~---------ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~ 300 (521)
T TIGR03801 236 L------RDPSIKALFVVNPSNPPSVAMSDESIEKIVD---------IVANDRPDLMILTDDVYGTFVDDFRSLFAELPY 300 (521)
T ss_pred h------cCCCCcEEEEeCCCCCCCCCCCHHHHHHHHH---------HHHhcCCCeEEEECCCchhhcccccchhhhCCC
Confidence 3 3578999999999999999999777766655 34435 99999999986311 11222111 2
Q ss_pred CcEEEEeccccccCCCc--ceEEEEech-----hHhhh--------ccccccCceEEecccchhhhhhcc----Cccccc
Q 010538 266 VDFVVMSFYKIFGYPTG--LGALIMRND-----AAKLL--------KNTYFSGGTVAASIADIDFVKRRQ----GVEELF 326 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G--~G~l~~~~~-----~~~~l--------~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~ 326 (508)
.-+++.|++|.|| .+| +|+++++++ +++.+ ...+. .+...+....|.++.. ......
T Consensus 301 ~vI~v~SfSK~fg-~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~---~~~~~p~~~~fidr~vadsr~v~~~~ 376 (521)
T TIGR03801 301 NTIGVYSFSKYFG-ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYS---SLTTEPRKLKFIDRLVADSRQVALNH 376 (521)
T ss_pred CEEEEEcchhhcc-CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhc---cccCChhhhhhHHHHHHHHHHHHHhc
Confidence 3488999999999 558 899999865 33221 11110 0000111111111100 001112
Q ss_pred cCCCCChhHHH--HHHHHHHHHH--hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 327 EDGTASFLSIA--SIRHGFNLIN--SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 327 ~~gt~~~~~~~--~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
..|. +.++.. ++.++...++ +...+...+.+++.++.+.+.| .. .+....+.+ +.++++
T Consensus 377 ~~g~-s~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L-g~-------~~~~~~~~g--------~~Y~~~ 439 (521)
T TIGR03801 377 TAGL-STPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL-GL-------PLQEDPNDV--------AYYTLI 439 (521)
T ss_pred cCCC-CcHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc-CC-------CCcCCCCCe--------EEEEEe
Confidence 2333 333332 3222333322 1235666777788888887777 22 121122222 678888
Q ss_pred EeeCCC----CCc--------cCH-HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCC
Q 010538 403 NLKRPD----GSW--------FGY-REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHG 469 (508)
Q Consensus 403 ~~~~~~----~~~--------~~~-~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 469 (508)
++.... +.+ .+. ..+.+++++.||.+.+|..|..+
T Consensus 440 di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-------------------------------- 487 (521)
T TIGR03801 440 DLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-------------------------------- 487 (521)
T ss_pred ehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC--------------------------------
Confidence 876421 000 112 23556667889999999866431
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 470 KPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 470 ~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
++.+|||+.. .+++++.+..+.|+++++
T Consensus 488 --~~~vRisla~-l~~~~~~~~~~rl~~~~~ 515 (521)
T TIGR03801 488 --EWSVRVSLAN-LNEYDYAEIGRAIRKILD 515 (521)
T ss_pred --CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Confidence 4679999963 367889999999888764
No 212
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.8e-19 Score=191.51 Aligned_cols=369 Identities=13% Similarity=0.086 Sum_probs=211.4
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHH-HHHHHcCC---CCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAARE-QVLDYFNA---SMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~la~~~~~---~~~~~~i~~t~g~t~ 114 (508)
.+.|.|.-+-....++..+.++.+...... |+...+...+.+++.+ .+.+..+. ++++.+|++|+|+++
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e~~~~~~~~~-------Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYELVDGIIGDN-------YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHhcCC-------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 345666666655555665555555553321 2222222333443333 22222222 211127999999999
Q ss_pred HHHHHHhhc----CCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCC
Q 010538 115 ALKLVGEAF----PWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 115 al~~~~~~l----~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
|+..++.++ ...+||+|+++...|+.+....++. ..|++++.++.+.+..+ ++|+++++ +
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~-g~~~~~v~v~~~~~~~f-------------~~d~~~l~--~ 236 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELP-RYDLEVVHINADEENEW-------------QYPDSELE--K 236 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHc-CCCeEEEEeecCcccCC-------------CCCHHHHH--h
Confidence 999988863 2688999999997777666554432 22455555655432222 23678888 4
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC--CCCeEEEEeccccCCC-CCCCCCC-C-C
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS--KGRWMVLIDAAKGCVT-QPPDLSK-Y-P 265 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~--~~g~~vivD~a~~~g~-~~~d~~~-~-~ 265 (508)
+ .+++|++|++++++||||.+++.+++.++++ +|+ +++++||+|.++..-. ...++.. . +
T Consensus 237 ~------~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~---------ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~ 301 (527)
T PRK09275 237 L------RDPSIKALFLVNPSNPPSVAMSDESLEKIAD---------IVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPY 301 (527)
T ss_pred h------cCCCCCEEEEeCCcCCcCCCCCHHHHHHHHH---------HHHhcCCCcEEEECCCChhhcccccCHHHhCCC
Confidence 4 3678999999999999999999777766655 342 3699999999986321 1112111 1 2
Q ss_pred CcEEEEeccccccCCCc--ceEEEEech-----hHhhh--------ccccccCceEEecccchhhhhhc----cCccccc
Q 010538 266 VDFVVMSFYKIFGYPTG--LGALIMRND-----AAKLL--------KNTYFSGGTVAASIADIDFVKRR----QGVEELF 326 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G--~G~l~~~~~-----~~~~l--------~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~ 326 (508)
.-+++.|++|.|| .+| +||++++++ +++.+ ...+. .+...+....|..+. .......
T Consensus 302 ~~I~v~SfSK~f~-mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~---~~~~~p~~~~fidrlvad~~~v~~~~ 377 (527)
T PRK09275 302 NTILVYSFSKYFG-ATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYS---SLTTDPEKLKFIDRLVADSRQVALNH 377 (527)
T ss_pred CEEEEeehhhhcc-CcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhh---hccCCcchhhhHHHHHHHHHHHHHhh
Confidence 4588999999999 668 899999886 43333 11100 000001111111110 0011122
Q ss_pred cCCCCChhHHH-H---HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 327 EDGTASFLSIA-S---IRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 327 ~~gt~~~~~~~-~---l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
..|.+.+.+.+ + +.++++.- +...+..++.+++.++.+.+.|. . .+....+.+ +.++++
T Consensus 378 t~~~s~p~Q~a~al~~~~all~~~-~~~~~~~~~~~~~Rr~~l~~~Lg-~-------~~~~~~p~g--------~fY~~~ 440 (527)
T PRK09275 378 TAGLSTPQQVQMALFSLFALLDEE-DAYKKAMKDIIRRRYKALYEGLG-L-------PEPEDPNNA--------AYYTLI 440 (527)
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCc-hHHHHHHHHHHHHHHHHHHHHcC-C-------CCcCCCCCe--------eEEEEE
Confidence 23333333333 2 22233321 12356677788888888877772 1 122122222 677777
Q ss_pred EeeCCC----CCc--------cCHHH-HHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCC
Q 010538 403 NLKRPD----GSW--------FGYRE-VEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHG 469 (508)
Q Consensus 403 ~~~~~~----~~~--------~~~~~-l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 469 (508)
++.... +.. .+..+ +.+++++.||.+.+|..|..+
T Consensus 441 di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~-------------------------------- 488 (527)
T PRK09275 441 DLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGP-------------------------------- 488 (527)
T ss_pred EhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCC--------------------------------
Confidence 775421 100 12223 456667889999999866331
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 470 KPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 470 ~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
++++|+|+.. .+++++....+.|.++++.
T Consensus 489 --~~~vRis~a~-~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 489 --EWSVRVSLAN-LNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred --CCeEEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence 5789999973 3678999999998888754
No 213
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=1e-19 Score=188.62 Aligned_cols=215 Identities=13% Similarity=0.062 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHH-HHHHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLG-IREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v~~v~~~~ 162 (508)
....++++.+++++|++ .+++++|+++|+.+++.++ .++|++|+++...|++... +...++..|+++..++.+
T Consensus 54 p~~~~le~~la~l~g~~----~~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~- 127 (380)
T TIGR01325 54 PTVAAFEERIAALEGAE----RAVATATGMSAIQAALMTL-LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT- 127 (380)
T ss_pred chHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC-
Confidence 34678899999999984 3577899999999999888 6789999998887876544 344567789999988764
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +
T Consensus 128 -------------------d~~~l~--~~i------~~~tklV~le~p~np~g~~~dl~~I~~la~~------------~ 168 (380)
T TIGR01325 128 -------------------DLNAWE--AAV------KPNTKLVFVETPSNPLGELVDIAALAELAHA------------I 168 (380)
T ss_pred -------------------CHHHHH--Hhc------CCCceEEEEECCCCCCCeeeCHHHHHHHHHH------------c
Confidence 255666 444 4578999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-c-eEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-L-GALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~-G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
|+++++|++++.+....++ ..++|+++.|++|+++++.. + |+++.+++.++.++.....
T Consensus 169 gi~livD~a~~~~~~~~pl-~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~------------------ 229 (380)
T TIGR01325 169 GALLVVDNVFATPVLQQPL-KLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH------------------ 229 (380)
T ss_pred CCEEEEECCCcccccCCch-hhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh------------------
Confidence 9999999998754332222 45789999999999995531 3 7777777776655433110
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
..++.+....+.+...++. +..+.++..+.++++.+.|++.+
T Consensus 230 ------~g~~~~p~~a~~~l~~l~t-----l~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 230 ------TGPAMSPFNAWVLLKGLET-----LSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred ------hCCCCCHHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 1122222222222223333 44556777778888888888763
No 214
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.7e-19 Score=188.06 Aligned_cols=313 Identities=14% Similarity=0.045 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+.+++.+|++.|++. .+ +++|+++|+.+++.++ .++|++|+++...|++..... ..++..|.++..++..
T Consensus 60 p~~~~Le~~lA~l~g~~~---~v-~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~- 133 (405)
T PRK08776 60 PTRDLLGEALAELEGGAG---GV-ITATGMGAINLVLNAL-LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLT- 133 (405)
T ss_pred hHHHHHHHHHHHHhCCCc---eE-EEcCHHHHHHHHHHHH-hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCC-
Confidence 446778899999999853 35 4555579999999998 789999998877776644433 3455678888888752
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||||.+.|+++|.++|++ +
T Consensus 134 -------------------d~~~l~--~~i------~~~tklV~l~~P~NPtG~v~dl~~I~~la~~------------~ 174 (405)
T PRK08776 134 -------------------DPRSLA--DAL------AQSPKLVLIETPSNPLLRITDLRFVIEAAHK------------V 174 (405)
T ss_pred -------------------CHHHHH--Hhc------CcCCeEEEEECCCCCCCccCCHHHHHHHHHH------------c
Confidence 356677 444 4578999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec-hhHhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.+.....+ .+++|+++.|+||++++|.+ .|+++.++ ++.+++....
T Consensus 175 gi~vIvD~a~a~~~~~~pl-~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~------------------- 234 (405)
T PRK08776 175 GALTVVDNTFLSPALQKPL-EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWA------------------- 234 (405)
T ss_pred CCEEEEECCCcccccCCcc-cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHH-------------------
Confidence 9999999999876543333 36899999999999987765 47777754 3433332110
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc-----
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY----- 393 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~----- 393 (508)
.....+.+....+.+...+++ ++.+.++..+.+..+.+.|++.+ .+. +.-|.-. ..+
T Consensus 235 -----~~~g~~~s~~~a~l~~~gl~t-----l~~r~~~~~~na~~la~~L~~~p------~v~~V~yP~l~-~~~~~~~~ 297 (405)
T PRK08776 235 -----NALGLTGSPFDAFLTLRGLRT-----LDARLRVHQENADAIAALLDGHA------AVNQVYYPGLA-SHPGHALA 297 (405)
T ss_pred -----HhcCCCCCHHHHHHHHhhhCc-----HHHHHHHHHHHHHHHHHHHHcCC------CeeEEECCCCC-CCcCHHHH
Confidence 001112333344444444444 46677788888888888888774 443 3333211 000
Q ss_pred ----CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhh----hhhhhcCCccCCCcc
Q 010538 394 ----HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDL----LSNIEAGHVCWDDND 465 (508)
Q Consensus 394 ----~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~----~~~~~~~~~~~~~~~ 465 (508)
..-+++++|.+++. .+. ..++...|+-..+.++-|...+.- .+++. ..|+.+ ...+|
T Consensus 298 ~~~~~g~g~~~s~~~~~~-~~~--~~~f~~~l~l~~~~~s~G~~~sl~-~~p~~-~~h~~~~~~~~~~~g---------- 362 (405)
T PRK08776 298 ARQQKGFGAMLSFELEGG-EAA--VRAFVDGLRYFTLAESLGGVESLI-AHPAS-MTHAAMTAEARAAAG---------- 362 (405)
T ss_pred HhcCCCCceEEEEEEcCC-HHH--HHHHHHhCCcceEccCCCCCceEE-ECCcc-cccccCCHHHHHhcC----------
Confidence 11377999999642 111 122444444334444444321110 00000 011111 11232
Q ss_pred ccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 466 IIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 466 ~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
..++.||+|++.-+.++=++.+-++|..
T Consensus 363 ----i~~~liR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 363 ----ISDGLLRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred ----CCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 3478999999987666555555555554
No 215
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=4.8e-19 Score=185.29 Aligned_cols=335 Identities=12% Similarity=0.083 Sum_probs=206.6
Q ss_pred CCCeeeeCCCCCCC----CHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAGATLY----SELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~ 114 (508)
++..|+|.++.+.+ +|.+++++.+.+. . +++.+..........+..+++++.++++++. + .+++++|+ +
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~-~-~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~--~~~~~sG~-~ 116 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALK-R-TGSLHLSSSRTRVRSQILKDLEEALSELFGA--S--VLTFTSCS-A 116 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHH-H-hCCCCCCccchhhhhHHHHHHHHHHHHHhCC--C--EEEECChH-H
Confidence 67889999776555 7888888766553 2 2211111111112356788999999999987 5 56666554 5
Q ss_pred HHHHHHhhcC---CCCC--CeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcC
Q 010538 115 ALKLVGEAFP---WSHQ--SSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 115 al~~~~~~l~---~~~g--~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
|+..++..+. ..++ +.|+.....|+++.......+ .+.+++.+|.. |+++++
T Consensus 117 a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~--------------------d~~~l~-- 173 (402)
T PRK07505 117 AHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHN--------------------DLDALE-- 173 (402)
T ss_pred HHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCC--------------------CHHHHH--
Confidence 6665553321 2222 345555688887654333332 35677777753 355566
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC---C--C-----C
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT---Q--P-----P 259 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~---~--~-----~ 259 (508)
+.+ .+++++++++.++|++|.+.|+++|.++|++ +|+++|+|++|+++. . . .
T Consensus 174 ~~~------~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~------------~~~~li~DEa~~~~~~g~~g~~~~~~~~ 235 (402)
T PRK07505 174 DIC------KTNKTVAYVADGVYSMGGIAPVKELLRLQEK------------YGLFLYIDDAHGLSIYGKNGEGYVRSEL 235 (402)
T ss_pred HHH------hcCCCEEEEEecccccCCcCCHHHHHHHHHH------------cCCEEEEECcccccCcCCCCCchHHHHc
Confidence 433 2346788888999999999999999999998 899999999986421 1 1 1
Q ss_pred CCCCCCCcEEEEeccccccCCCcceEEEE-echhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHH
Q 010538 260 DLSKYPVDFVVMSFYKIFGYPTGLGALIM-RNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIAS 338 (508)
Q Consensus 260 d~~~~~~D~~~~S~~K~~g~P~G~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~ 338 (508)
+....+..+++.|++|.++ .+| |++.+ +++..+.+.....+ . ...++++..++++
T Consensus 236 ~~~~~d~~i~~~s~sK~~~-~~G-g~~~~~~~~~~~~~~~~~~~---------------------~-t~~~~~~~~a~aa 291 (402)
T PRK07505 236 DYRLNERTIIAASLGKAFG-ASG-GVIMLGDAEQIELILRYAGP---------------------L-AFSQSLNVAALGA 291 (402)
T ss_pred CCCCCCCeEEEEechhhhh-ccC-eEEEeCCHHHHHHHHHhCCC---------------------c-eeCCCCCHHHHHH
Confidence 1101234578889999998 445 77765 55665555432111 1 1235566777888
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHH
Q 010538 339 IRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVE 418 (508)
Q Consensus 339 l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 418 (508)
+.++++.+.+..+.+..+++.+..+.+...+... ..+. -..+.++.+++. .....+.
T Consensus 292 ~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------------~~g~------~~~i~~~~~~~~----~~~~~~~ 348 (402)
T PRK07505 292 ILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-------------QSGS------FLPIRLIYIGDE----DTAIKAA 348 (402)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-------------CCCC------CCCEEEEEeCCH----HHHHHHH
Confidence 8888886655555555555444444332222110 1111 133334433221 1123578
Q ss_pred HHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 419 KLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 419 ~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
+.|.++||.+++......+. ..+++||+++..+|.||++++++.|+++
T Consensus 349 ~~l~~~Gi~v~~~~~p~~~~--------------------------------~~~~lRi~~~~~~t~eei~~~~~~l~~~ 396 (402)
T PRK07505 349 KQLLDRGFYTSPVFFPVVAK--------------------------------GRAGLRIMFRASHTNDEIKRLCSLLKEI 396 (402)
T ss_pred HHHHHCCCeEeeecCCCCCC--------------------------------CCceEEEecCccCCHHHHHHHHHHHHHH
Confidence 88889999998753211110 1368999999999999999999999987
Q ss_pred hh
Q 010538 499 VN 500 (508)
Q Consensus 499 ~~ 500 (508)
++
T Consensus 397 l~ 398 (402)
T PRK07505 397 LD 398 (402)
T ss_pred HH
Confidence 64
No 216
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=1.5e-19 Score=188.57 Aligned_cols=168 Identities=11% Similarity=0.079 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+++++.+++++|++.. ++++|++.|+.+++.++ +++|++||++...|+....+. ..+...|++++.++.+
T Consensus 65 p~~~~le~~lA~l~g~~~~----i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 138 (403)
T PRK07503 65 PTLALLEQRMASLEGGEAA----VALASGMGAITATLWTL-LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT- 138 (403)
T ss_pred chHHHHHHHHHHHhCCCcE----EEEcCHHHHHHHHHHHH-cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-
Confidence 3477889999999999643 45556778999999887 789999999988786655543 3466789999998863
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +
T Consensus 139 -------------------d~~~l~--~~i------~~~tklV~le~p~NPtG~~~di~~I~~la~~------------~ 179 (403)
T PRK07503 139 -------------------DPAALK--AAI------SDKTRMVYFETPANPNMRLVDIAAVAEIAHG------------A 179 (403)
T ss_pred -------------------CHHHHH--Hhc------CccCcEEEEeCCCCCCCeeeCHHHHHHHHHH------------c
Confidence 256677 444 4678999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLK 297 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~ 297 (508)
|+++++|++++.+.....+ ..++|+++.|++|+++++.+ .|+++.++++.++++
T Consensus 180 gi~lIvD~a~a~~~~~~~l-~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~ 235 (403)
T PRK07503 180 GAKVVVDNTYCTPYLQRPL-ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIR 235 (403)
T ss_pred CCEEEEECCCcccccCCch-hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHH
Confidence 9999999999876543333 35799999999999995543 588887777766554
No 217
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.86 E-value=1.7e-19 Score=188.06 Aligned_cols=315 Identities=13% Similarity=0.037 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCCc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~~ 163 (508)
...++++.+|++.|.+ ++++++|++.|+.+++.++ .++|++|+++...|++..... ..++..|++++.++..
T Consensus 65 ~~~~Le~~iA~~~g~~----~~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 137 (400)
T PRK06234 65 TSTEVENKLALLEGGE----AAVVAASGMGAISSSLWSA-LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-- 137 (400)
T ss_pred cHHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC--
Confidence 3678899999999975 3577788888999888887 688999999998888766543 4566789999998753
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC-
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG- 242 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~- 242 (508)
|+++++ +++ +++|++|++++++||||.+.|+++|.++|++ +
T Consensus 138 ------------------d~e~l~--~~i------~~~tklI~iesP~NPtG~v~dl~~I~~la~~------------~~ 179 (400)
T PRK06234 138 ------------------NLEEVR--NAL------KANTKVVYLETPANPTLKVTDIKAISNIAHE------------NN 179 (400)
T ss_pred ------------------CHHHHH--HHh------ccCCeEEEEECCCCCCCCcCCHHHHHHHHHh------------cC
Confidence 356677 444 4678999999999999999999999999997 5
Q ss_pred -CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhc
Q 010538 243 -RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 -g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.+.....+ ..++|+++.|++|+++++.. .|+++.++++++.++....
T Consensus 180 ~~i~livDea~~~~~~~~~l-~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~------------------ 240 (400)
T PRK06234 180 KECLVFVDNTFCTPYIQRPL-QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGI------------------ 240 (400)
T ss_pred CCCEEEEECCCCchhcCCch-hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHH------------------
Confidence 9999999999877543333 34799999999999985532 4899988887665542200
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCccc-----
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSY----- 393 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~----- 393 (508)
......+.+....+.+...++ .++.+.++..+.++++.+.|++.+ .+ +++-|.-. ..+
T Consensus 241 ----~~~~g~~l~p~~a~l~~~~l~-----tl~~r~~~~~~na~~~a~~L~~~~------~V~~V~~p~l~-~~~~~~~~ 304 (400)
T PRK06234 241 ----KDMTGSVIGPFEAFLIIRGMK-----TLQIRMEKHCKNAMKVAKFLESHP------AVEKVYYPGLE-SFEYYELA 304 (400)
T ss_pred ----HHhcCCCCCHHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHcCC------CeeEEECCCCC-CCCcHHHH
Confidence 000112222222222222332 245566677788888888888763 34 33333210 000
Q ss_pred ----CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhh----hhhhhcCCccCCCcc
Q 010538 394 ----HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDL----LSNIEAGHVCWDDND 465 (508)
Q Consensus 394 ----~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~----~~~~~~~~~~~~~~~ 465 (508)
...+++++|.+++.. . ....+.+.|+..++.++.|...+.-. +++. -.++.+ .+..|
T Consensus 305 ~~~~~~~g~l~s~~l~~~~-~--~~~~f~~~l~~~~~~~s~G~~~sl~~-~p~~-~~~~~~~~~~~~~~g---------- 369 (400)
T PRK06234 305 KKQMSLPGAMISFELKGGV-E--EGKVVMNNVKLATLAVSLGDAETLIQ-HPAS-MTHSPYTAEERKEAG---------- 369 (400)
T ss_pred HHhCCCCCceEEEEecCcH-H--HHHHHHHhCCcceEeccCCCCCceec-CCcc-CCCCCCCHHHHHhcC----------
Confidence 123789999997421 1 11346677777777777774332210 0000 001111 11222
Q ss_pred ccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 466 IIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 466 ~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
..++.||+|++.-+.++=++.+.++|..+
T Consensus 370 ----i~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 370 ----ISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred ----CCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 34789999999877666666666666654
No 218
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=8.7e-20 Score=189.64 Aligned_cols=217 Identities=13% Similarity=0.076 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~ 162 (508)
...+++++.+|+++|.+.. ++++|++.|+.+++.++ .++|++|+++...|++.... ...+...|+++..++.+
T Consensus 59 p~~~~le~~lA~l~g~~~a----v~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~- 132 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEAA----VATSSGMGAIAATLLTI-LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA- 132 (391)
T ss_pred chHHHHHHHHHHHhCCCcE----EEECCHHHHHHHHHHHH-hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC-
Confidence 3467789999999998743 66677778999998888 68899999998888765544 34456689999998764
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +
T Consensus 133 -------------------d~e~l~--~~i------~~~tklV~le~p~Np~G~v~dl~~I~~la~~------------~ 173 (391)
T TIGR01328 133 -------------------IPEEVK--AHI------KDNTKIVYFETPANPTMKLIDMERVCRDAHS------------Q 173 (391)
T ss_pred -------------------CHHHHH--Hhh------ccCCeEEEEECCCCCCCcccCHHHHHHHHHH------------c
Confidence 256667 444 4678999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
|+++++|++++.+.....+ ..++|+++.|++|+++++.+ .|+++.+++++++++....
T Consensus 174 gi~livD~a~a~~~~~~~~-~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~------------------- 233 (391)
T TIGR01328 174 GVKVIVDNTFATPMLTNPV-ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGI------------------- 233 (391)
T ss_pred CCEEEEECCCchhccCCch-hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHH-------------------
Confidence 9999999999876543333 35799999999999996643 4777777777665543210
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
.....+..+....+.+...++ .+..+.++..++++++.+.|++.+
T Consensus 234 ---~~~~g~~l~~~~a~l~l~~L~-----tl~~r~~~~~~na~~la~~L~~~p 278 (391)
T TIGR01328 234 ---KDMTGSVISPFDAWLILRGLK-----TLNIRMKRHSENAMKVAEYLKSHP 278 (391)
T ss_pred ---HhCCCCCCCcHHHHHHHhCcC-----cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 000011222221221122222 245567778888999999998874
No 219
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.5e-19 Score=187.31 Aligned_cols=214 Identities=11% Similarity=0.025 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
...+++++.+|+++|.+ ++++++|++.|+.+++.++ +++|++|+++...|+++..+.+.++..|+++..++.
T Consensus 53 p~~~~lE~~lA~l~g~~----~~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~--- 124 (385)
T PRK08574 53 PTLRPLEEALAKLEGGV----DALAFNSGMAAISTLFFSL-LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP--- 124 (385)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC---
Confidence 34677899999999975 3566778889999999888 788999999999999887776655667888877643
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCC-CceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGD-AYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~-~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
++++++ +++ ++ +|++|++++++||||.+.|+++|.++|++ +
T Consensus 125 ------------------d~~~l~--~~i------~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~------------~ 166 (385)
T PRK08574 125 ------------------STEDII--EAI------KEGRTKLVFIETMTNPTLKVIDVPEVAKAAKE------------L 166 (385)
T ss_pred ------------------CHHHHH--Hhc------CccCceEEEEECCCCCCCEecCHHHHHHHHHH------------c
Confidence 245566 444 34 78999999999999999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-c-eEEEEe-chhHhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-L-GALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~-G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.|.....+ +.++|+++.|++|++++|.. + |+++.+ +++.++++...
T Consensus 167 gi~livD~t~a~~~~~~~l-~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~------------------- 226 (385)
T PRK08574 167 GAILVVDNTFATPLLYRPL-RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR------------------- 226 (385)
T ss_pred CCEEEEECCCCccccCChh-hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-------------------
Confidence 9999999999877542222 46899999999999987754 3 656664 44444433210
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
+...+..+....+.+..+++. +..+.++..+++.++.+.|++.+
T Consensus 227 -----~~~g~~~~p~~a~l~l~~l~t-----L~~R~~~~~~na~~la~~L~~~p 270 (385)
T PRK08574 227 -----RRLGTIMQPFEAYLVLRGLKT-----LEVRFERQCRNAMAIAEFLSEHP 270 (385)
T ss_pred -----HhcCCCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 011112222222222223332 45566667778888888888763
No 220
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1e-19 Score=189.34 Aligned_cols=320 Identities=16% Similarity=0.078 Sum_probs=198.9
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEc
Q 010538 81 ATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAID 159 (508)
Q Consensus 81 ~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~ 159 (508)
......+++++++|++.|++. .++++++++|+.+++.++ .++|++|+++...|++....+ ..+...|+++..++
T Consensus 61 ~~~p~~~~le~~lA~l~g~~~----~i~~ssG~~Ai~~~l~al-l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 135 (398)
T PRK08249 61 NTNPTVQAFEEKVRILEGAEA----ATAFSTGMAAISNTLYTF-LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE 135 (398)
T ss_pred CCChHHHHHHHHHHHHhCCCe----EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC
Confidence 345567889999999999753 355556678999998888 688999999998888765544 34667899888776
Q ss_pred cCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCC
Q 010538 160 VEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPF 239 (508)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~ 239 (508)
. . |+++++ +++ +++|++|++++++||||.+.|+++|.++|++
T Consensus 136 ~-----~---------------d~e~l~--~~i------~~~tklV~ie~p~NPtg~v~dl~~I~~la~~---------- 177 (398)
T PRK08249 136 T-----G---------------DHEQIE--AEI------AKGCDLLYLETPTNPTLKIVDIERLAAAAKK---------- 177 (398)
T ss_pred C-----C---------------CHHHHH--Hhc------CCCCeEEEEECCCCCCCccCCHHHHHHHHHH----------
Confidence 4 1 467777 554 4678999999999999999999999999998
Q ss_pred CCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-c-eEEEEechhHhhhccccccCceEEecccchhhhh
Q 010538 240 SKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-L-GALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 240 ~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~-G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
+|+++++|++++.+.....+ ..++|+++.|++|+++++.. + |+++.++++++++....
T Consensus 178 --~gi~livD~t~a~~~~~~~l-~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~----------------- 237 (398)
T PRK08249 178 --VGALVVVDNTFATPINQNPL-ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR----------------- 237 (398)
T ss_pred --cCCEEEEECCcCccccCCch-hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-----------------
Confidence 99999999999865433222 35799999999999994432 3 66666666665554321
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc---
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY--- 393 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~--- 393 (508)
....++.+....+.+...++. +....++..+.++.+.+.|++.+ .++ ++-|.-. ..+
T Consensus 238 -------~~~g~~~s~~~a~l~l~~l~t-----L~~R~~~~~~na~~la~~L~~~p------~v~~V~yP~l~-~~~~~~ 298 (398)
T PRK08249 238 -------EINGATMDPMSAYLILRGMKT-----LKLRVRQQQESAMALAKYLQTHP------KVEAVYYPGLE-THPNHE 298 (398)
T ss_pred -------HhcCCCCCHHHHHHHHhCcch-----HHHHHHHHHHHHHHHHHHHHcCC------CeeEEECCCCC-CCccHH
Confidence 111223333333333334443 34555677788888888888763 343 3333211 000
Q ss_pred ------CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCcccc
Q 010538 394 ------HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDII 467 (508)
Q Consensus 394 ------~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 467 (508)
..-+++++|.+++. .+ ...++...|+--.+.++-|...+.- .+++. ..|+.+.. +.+..
T Consensus 299 ~~~~~~~g~g~~~sf~~~~~--~~-~~~~f~~~l~l~~~~~s~G~~~sl~-~~~~~-~~~~~~~~----------~~~~~ 363 (398)
T PRK08249 299 IAKAQMRGFGGILSFVLKGG--MD-TVKRLLPKLRYAHRAANLGAVETIY-GPART-TSHVENTL----------EERAA 363 (398)
T ss_pred HHHhhCCCCCceEEEEEcCC--HH-HHHHHHHhCCcceEccCCCCCCcee-eCCcc-cccccCCH----------HHHHh
Confidence 01378999999642 11 1123444444334444444321110 00000 01111111 00001
Q ss_pred CCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 468 HGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 468 ~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.+..++.||+|++.-+-++=++.+.++|..
T Consensus 364 ~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 364 LGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred cCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 123478999999986655555555555543
No 221
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.85 E-value=2.2e-19 Score=188.26 Aligned_cols=347 Identities=14% Similarity=0.101 Sum_probs=222.2
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+..+|.+++++.+... .. ..+..+........++.+.++++++.+.+ +++|++|+
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~-~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~sg 105 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLA-KL-----THFSLGFFYNEPAVELAELLLALTPEGLD--KVFFVNSG 105 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHH-hC-----cCccCcccCCHHHHHHHHHHHHhCCCCCC--EEEEcCcH
Confidence 5677888765 33357888888766542 11 11111111345678899999999998777 89999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccc-hHHHHHHHHh---------cCCeEEEEccCCccCcccccccccccccccc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNS-VLGIREYALS---------QGAAAFAIDVEEAVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s-~~~~~~~~~~---------~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~ 181 (508)
++|+..++..+. ..+++.|++.+..|.+ ...+...... ....+..+|.+..... ......
T Consensus 106 sea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 176 (413)
T cd00610 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRP---------PAELAD 176 (413)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccc---------hhhHHH
Confidence 999999888763 3557777777654444 3333332211 0123555665421100 000122
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VT 256 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~ 256 (508)
|++.++ +.+.+. .+++++|+++.+++++|.+.| +++|.++|++ +|+++++|++++. |.
T Consensus 177 d~~~l~--~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~------------~~~~li~Dev~~g~g~ 239 (413)
T cd00610 177 DLEALE--EALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRK------------HGILLIADEVQTGFGR 239 (413)
T ss_pred HHHHHH--HHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEeccccCCCc
Confidence 567777 555321 246789999999999999998 8888888887 9999999999873 21
Q ss_pred C----CCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhh--ccccccCceEEecccchhhhhhccCccccccCCC
Q 010538 257 Q----PPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLL--KNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT 330 (508)
Q Consensus 257 ~----~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 330 (508)
. ..+......|++ |++|++++...+|++++++++++.+ ..... ....+
T Consensus 240 ~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~------------------------~~t~~ 293 (413)
T cd00610 240 TGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGREEIMDAFPAGPGLH------------------------GGTFG 293 (413)
T ss_pred CcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcHHHHHhhccCCCCC------------------------CCCCC
Confidence 1 112222345765 4559888433389999998887765 11100 01123
Q ss_pred CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC
Q 010538 331 ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS 410 (508)
Q Consensus 331 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 410 (508)
.+...+++..++++++.+ +.+.+++.++.+++++.|+++.. ...+..... ..++++++.+.+....
T Consensus 294 ~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~~~------~~g~~~~~~~~~~~~~ 359 (413)
T cd00610 294 GNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAE-----KHPLVGDVR------GRGLMIGIELVKDRAT 359 (413)
T ss_pred cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----hCCcEEEee------cCceEEEEEEecCCCc
Confidence 345556777778888765 46778899999999999887621 001111111 1278888888653110
Q ss_pred ----ccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 411 ----WFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 411 ----~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
......+.+.|.++||.+.++. .+.+|+++++.+|++
T Consensus 360 ~~~~~~~~~~~~~~l~~~gv~v~~~~---------------------------------------~~~lR~~~~~~~t~~ 400 (413)
T cd00610 360 KPPDKELAAKIIKAALERGLLLRPSG---------------------------------------GNVIRLLPPLIITEE 400 (413)
T ss_pred CCcchHHHHHHHHHHHHCCeEEeecC---------------------------------------CCEEEEECCCcCCHH
Confidence 0123457788889999998752 367999999999999
Q ss_pred HHHHHHHhhhhh
Q 010538 487 DAKVNRCSSFDF 498 (508)
Q Consensus 487 ev~~l~~~~~~~ 498 (508)
|++++++.+.+.
T Consensus 401 ~i~~~~~~l~~~ 412 (413)
T cd00610 401 EIDEGLDALDEA 412 (413)
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 222
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=2.3e-19 Score=186.52 Aligned_cols=162 Identities=11% Similarity=0.027 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~ 162 (508)
....+++++.+|++.|++.. +++++| +.|+..++.++ +++|++||++...|++.......+++.|++++.++..
T Consensus 46 ~p~~~~lE~~la~leg~~~~---v~~ssG-~~Ai~~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~- 119 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGT---VCFATG-MAAIAAVFLTL-LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT- 119 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeE---EEeCCH-HHHHHHHHHHH-cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-
Confidence 34577889999999998754 665555 78999999888 7899999999999988766666677789999999863
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||||.+.|+++|.++||+ +
T Consensus 120 -------------------d~e~l~--~~l------~~~tklV~vesp~NptG~v~dl~~I~~la~~------------~ 160 (397)
T PRK05939 120 -------------------DVQNVA--AAI------RPNTRMVFVETIANPGTQVADLAGIGALCRE------------R 160 (397)
T ss_pred -------------------CHHHHH--HhC------CCCCeEEEEECCCCCCCCHHhHHHHHHHHHH------------c
Confidence 356777 444 5789999999999999999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-ceEEEEec
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-LGALIMRN 290 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~G~l~~~~ 290 (508)
|+++++|++++.+. .++..+.++|+++.|+||+++++.+ +|++++.+
T Consensus 161 gi~livD~t~a~~~-~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 161 GLLYVVDNTMTSPW-LFRPKDVGASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred CCEEEEECCccccc-ccCccccCCEEEEecCeecccCCCCeEEEEEecC
Confidence 99999999997764 3556667899999999999995533 57766643
No 223
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.85 E-value=4.7e-19 Score=196.59 Aligned_cols=329 Identities=9% Similarity=-0.003 Sum_probs=219.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCC-------CCCCeEEEecccccchHHHHHHHHhc
Q 010538 79 SLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPW-------SHQSSYMYTMENHNSVLGIREYALSQ 151 (508)
Q Consensus 79 ~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~-------~~g~~vl~~~~~h~s~~~~~~~~~~~ 151 (508)
.....+++.+..+++++++|.+.. -+..++++.|-.+.+.++.. .+..+|+++...|.+.-.... ..
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~~---Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~---~~ 598 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDAI---SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAA---MA 598 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCc---ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHH---HC
Confidence 344678899999999999999844 34555555554433322211 234689999999977755533 45
Q ss_pred CCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC-HHHHHHHHcCC
Q 010538 152 GAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN-LDLINIMKKNP 230 (508)
Q Consensus 152 G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~-i~~i~~l~~~~ 230 (508)
|++++.||.+.++.+ |+++++ +.+++ .+++|++|++++++| +|.+.| +++|+++||+
T Consensus 599 G~~Vv~V~~d~~G~i---------------Dle~L~--~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~- 656 (939)
T TIGR00461 599 GMQVVPVNCDQDGNI---------------DLVDLK--NKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHS- 656 (939)
T ss_pred CCEEEEeccCCCCCc---------------CHHHHH--HHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHH-
Confidence 999999999877877 688888 66643 246899999999998 799988 9999999998
Q ss_pred ccccccCCCCCCCeEEEEeccccCCCCCC-CCCCCCCcEEEEeccccccCC-----CcceEEEEechhHhhhccccccCc
Q 010538 231 ERILEISPFSKGRWMVLIDAAKGCVTQPP-DLSKYPVDFVVMSFYKIFGYP-----TGLGALIMRNDAAKLLKNTYFSGG 304 (508)
Q Consensus 231 ~~~~~~~~~~~~g~~vivD~a~~~g~~~~-d~~~~~~D~~~~S~~K~~g~P-----~G~G~l~~~~~~~~~l~~~~~g~~ 304 (508)
+|.++++|+++..+...+ +..++++|++++|.||+|++| +|+|++.+++++ .|...|..
T Consensus 657 -----------~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L----~~~lPg~~ 721 (939)
T TIGR00461 657 -----------FGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHL----IPFLPKHD 721 (939)
T ss_pred -----------cCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhc----hhhcCCCc
Confidence 899999999997744444 446789999999999977734 457999999764 44444432
Q ss_pred eEEecccchhhhhhccCccccccC--CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE
Q 010538 305 TVAASIADIDFVKRRQGVEELFED--GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT 382 (508)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~--gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~ 382 (508)
.+...... . + ...-+... ++-+..-+...+..+.++...|+.+..+....+++|+.+.|++. ++
T Consensus 722 v~~t~d~~-g---r--eq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--------~~ 787 (939)
T TIGR00461 722 VVSMITGI-G---G--SKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--------YP 787 (939)
T ss_pred ccccccCC-C---C--ccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--------Cc
Confidence 11100000 0 0 00001111 22222333344556677777788999999999999999999873 44
Q ss_pred EecCCCCCcccCCCCceEEEEeeCC-CCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccC
Q 010538 383 IYGTYTSEVSYHDTGSMVSFNLKRP-DGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCW 461 (508)
Q Consensus 383 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 461 (508)
+.-+... ....+-+.|+++.. +...+...++.+.|.+.|+..-. ..+ +
T Consensus 788 ~l~~~~~----~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt-~~~-p------------------------- 836 (939)
T TIGR00461 788 ILFVGTL----KHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPT-LSF-P------------------------- 836 (939)
T ss_pred ccccCCC----CceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccc-cCC-c-------------------------
Confidence 4433211 00134455665531 11124567899999999998543 211 1
Q ss_pred CCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 462 DDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 462 ~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
..+.+=|.+.--+|.+|+|+++++|..+.+.++.
T Consensus 837 ---------v~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 837 ---------VPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred ---------cCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 0345555555578999999999999988776654
No 224
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.1e-19 Score=188.33 Aligned_cols=163 Identities=10% Similarity=0.020 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~ 162 (508)
...+.+++.+|++.|++.. +++++++.|+.+++.++ .++|++|+++...|.+...... .+.+.|++++.++ +.
T Consensus 69 p~~~~Le~~lA~l~g~~~a----v~~sSG~aAi~~al~al-l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~ 142 (436)
T PRK07812 69 PTQDVVEQRIAALEGGVAA----LLLASGQAAETFAILNL-AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP 142 (436)
T ss_pred chHHHHHHHHHHHhCCCeE----EEEccHHHHHHHHHHHH-hCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC
Confidence 4466889999999998743 66677788999999888 6889999999888877665544 3566788888885 21
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
. |+++++ +++ +++|++|++.+++||+|.+.|+++|.++||+ +
T Consensus 143 ---~---------------d~e~l~--~ai------~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~------------~ 184 (436)
T PRK07812 143 ---D---------------DLDAWR--AAV------RPNTKAFFAETISNPQIDVLDIPGVAEVAHE------------A 184 (436)
T ss_pred ---C---------------CHHHHH--HhC------CCCCeEEEEECCCCCCCeecCHHHHHHHHHH------------c
Confidence 1 366777 444 5789999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-ceEEEEech
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-LGALIMRND 291 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~G~l~~~~~ 291 (508)
|++++||++++.+.....+ ++++|+++.|+||++|++.+ +|.+++...
T Consensus 185 gi~liVD~t~a~~~~~~pl-~~GaDivv~S~tK~lgg~G~~i~G~vv~~~ 233 (436)
T PRK07812 185 GVPLIVDNTIATPYLIRPL-EHGADIVVHSATKYLGGHGTAIAGVIVDGG 233 (436)
T ss_pred CCEEEEECCCcccccCCch-hcCCCEEEEecccccCCCCCeEEEEEEcCC
Confidence 9999999999877654444 56899999999999995533 677777543
No 225
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=1.8e-19 Score=188.42 Aligned_cols=320 Identities=11% Similarity=0.033 Sum_probs=199.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HH-HhcCCeEEEEcc
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YA-LSQGAAAFAIDV 160 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~-~~~G~~v~~v~~ 160 (508)
....+++++.+|+++|.+. +++++|+++|+.+++.++ .++|++|+++...|+++...+. .+ +..|++++.++.
T Consensus 75 ~Pt~~~LE~~lA~l~g~~~----~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~ 149 (418)
T PLN02242 75 NPTVLNLGRQMAALEGTEA----AYCTASGMSAISSVLLQL-CSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI 149 (418)
T ss_pred ChhHHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC
Confidence 4457888999999999974 467899999999999998 6899999999877776655432 22 336888877765
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCC-CceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGD-AYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPF 239 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~-~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~ 239 (508)
. |+++++ +++ ++ +|++|++++++||||.+.|+++|.++|++
T Consensus 150 ~--------------------d~e~l~--~~i------~~~~tklV~lesp~NPtG~v~dl~~I~~la~~---------- 191 (418)
T PLN02242 150 T--------------------DLEAVK--KAV------VPGKTKVLYFESISNPTLTVADIPELARIAHE---------- 191 (418)
T ss_pred C--------------------CHHHHH--Hhc------CcCCCEEEEEecCCCCCCcccCHHHHHHHHHH----------
Confidence 3 366777 554 34 58999999999999999999999999998
Q ss_pred CCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhh
Q 010538 240 SKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 240 ~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
+|++|++|.+++... .+...+++|+++.|++|+++++.. .|+++.++++++.+.....+
T Consensus 192 --~gi~livDea~~~~~--~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~--------------- 252 (418)
T PLN02242 192 --KGVTVVVDNTFAPMV--LSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHG--------------- 252 (418)
T ss_pred --hCCEEEEECCCCccC--CCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhh---------------
Confidence 899999999996433 344455799999999999984532 48888888877665533110
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCC-------
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSE------- 390 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~------- 390 (508)
.....|....+..+.+ .+.. ...+..+.++..+.++++.+.|++. +++++-|.-..
T Consensus 253 ------~~~~~g~~~~~~~A~l-~~~~---l~tl~~r~~~~~~~a~~la~~L~~~-------~~~V~yP~l~~~p~~~~~ 315 (418)
T PLN02242 253 ------ALMLLGPTMNPKVAFE-LSER---LPHLSLRMKEHCRRAMEYAKRMKEL-------GLKVIYPGLEDHPQHALL 315 (418)
T ss_pred ------hhhccCCCCCHHHHHH-HHcC---CCcHHHHHHHHHHHHHHHHHHHHhC-------CCEEECCCCCCCccHHHH
Confidence 0011232222222221 1211 1235666778889999999999887 35555443000
Q ss_pred --cc--cCCCCceEEEEeeCCCCCccCHHHHHHHHhhC----CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCC
Q 010538 391 --VS--YHDTGSMVSFNLKRPDGSWFGYREVEKLASLS----GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWD 462 (508)
Q Consensus 391 --~~--~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~----gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 462 (508)
.- ...-+++++|.+.+.+ . ...+.+.|+-- .+.++.|...+.-. +++. -.++.+-.
T Consensus 316 ~~~~~~~~g~g~~~sf~l~~~~--~--~~~f~~~l~~~~~~~~~~~slG~~~sl~~-~p~~-~~~~~~~~---------- 379 (418)
T PLN02242 316 KSMANKGYGFGGLLCLDMDTEE--R--ANRLMRYLQNSTQFGFMAVSLGYYETLMS-CSGS-STSSELDP---------- 379 (418)
T ss_pred HHhcccCCCceeEEEEEECCHH--H--HHHHHHHhhcccccceeeecCCCCCceee-CCCc-cccccCCH----------
Confidence 00 0013789999995321 1 12344444322 34455554322210 0000 01111111
Q ss_pred CccccCCCCCceEEEecCCCC-CHHHHHHHHHhhhh
Q 010538 463 DNDIIHGKPTGAIRVSFGYMS-TFEDAKVNRCSSFD 497 (508)
Q Consensus 463 ~~~~~~~~~~~~iRis~~~~~-t~eev~~l~~~~~~ 497 (508)
+.+...+..++.||+|++.-. .++=|+.|-++|..
T Consensus 380 ~~~~~~gi~~~liRlsvGlE~~~~dli~dl~~al~~ 415 (418)
T PLN02242 380 EEKAAAGISPGLVRMSVGYTGTLEQRWSQFEKALSA 415 (418)
T ss_pred HHHHhcCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 011112234789999999863 45555555555543
No 226
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.9e-19 Score=186.96 Aligned_cols=311 Identities=14% Similarity=0.047 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~ 162 (508)
...+++++++|++.|.+.. +++ +|+++|+.+++.++ .++|++|+++...|++.... ...++..|++++.++..
T Consensus 61 p~~~~Le~~lA~~~g~~~~---i~~-~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~- 134 (388)
T PRK07811 61 PTRTALEEQLAALEGGAYG---RAF-SSGMAATDCLLRAV-LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLS- 134 (388)
T ss_pred ccHHHHHHHHHHHhCCCce---EEe-CCHHHHHHHHHHHH-hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCC-
Confidence 4477889999999999865 555 45689999999998 78999999999888765443 33445568888877652
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +
T Consensus 135 -------------------d~e~l~--~~i------~~~tklV~ie~p~NPtg~~~dl~~I~~la~~------------~ 175 (388)
T PRK07811 135 -------------------DLDAVR--AAI------TPRTKLIWVETPTNPLLSITDIAALAELAHD------------A 175 (388)
T ss_pred -------------------CHHHHH--Hhc------CcCCeEEEEECCCCCcceecCHHHHHHHHHH------------c
Confidence 367777 444 4678999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEech-hHhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRND-AAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.+.....+ ..++|++++|++|++++|.+ .|+++++++ +.+.+.......
T Consensus 176 gi~lIvD~a~a~~~~~~p~-~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~---------------- 238 (388)
T PRK07811 176 GAKVVVDNTFASPYLQQPL-ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGA---------------- 238 (388)
T ss_pred CCEEEEECCCCccccCCch-hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhc----------------
Confidence 9999999999887543333 35799999999999996754 488887654 433333221110
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc-----
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY----- 393 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~----- 393 (508)
....+....+ .++.-+. .+..+.++..+++..+.+.|++.+ .++ ++-|.-. ..+
T Consensus 239 --------g~~~s~~~a~---l~~~~L~--tl~~R~~~~~~na~~la~~L~~~p------~v~~V~yP~l~-~~~~~~~~ 298 (388)
T PRK07811 239 --------GAVPGPFDAY---LTLRGLK--TLAVRMDRHSENAEAVAEFLAGHP------EVSTVLYPGLP-SHPGHEVA 298 (388)
T ss_pred --------CCCCCHHHHH---HHHhccC--cHHHHHHHHHHHHHHHHHHHHhCC------CeeEEECCCCC-CCchHHHH
Confidence 1111111111 1222111 245666777888999999998874 453 3333211 000
Q ss_pred ----CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhh-hhhhcCCccCCCccccC
Q 010538 394 ----HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLL-SNIEAGHVCWDDNDIIH 468 (508)
Q Consensus 394 ----~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~ 468 (508)
..-+++++|.+++. .. ...++...|+-..+.++-|...+.- .+++. ..++.+. +..
T Consensus 299 ~~~~~g~g~~~s~~~~~~-~~--~~~~f~~~l~~~~~~~s~G~~~sl~-~~~~~-~~~~~~~~~~~-------------- 359 (388)
T PRK07811 299 ARQMRGFGGMVSVRLAGG-EE--AARDFCARTKVFTLAESLGGVESLI-EHPSA-MTHASTAGSQL-------------- 359 (388)
T ss_pred HHhcCCCCceEEEEeCCC-HH--HHHHHHHhCCcceeeccCCCCcceE-eCCcc-cCcccCCHhhc--------------
Confidence 01278999999642 11 1123444444334444444321110 00000 0011110 111
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 469 GKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 469 ~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
+..++.||+|++.-+.++=++.+.++|
T Consensus 360 gi~~~liR~svGlE~~~dl~~dl~~al 386 (388)
T PRK07811 360 EVPDDLVRLSVGIEDVADLLADLEQAL 386 (388)
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHHHHh
Confidence 234789999999866555555555554
No 227
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.2e-19 Score=188.25 Aligned_cols=162 Identities=14% Similarity=0.104 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHH-HHHHHHhcCCeEEEEcc
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLG-IREYALSQGAAAFAIDV 160 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v~~v~~ 160 (508)
.....+.+++.++++.|++ . .|+|++|+ .|+.+++.++ +++|++||++..+|.+... +...+++.|+++..++
T Consensus 67 ~~pt~~~le~~la~l~g~~-~--~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 67 TNPTVEALENRIASLEGGV-H--AVAFASGQ-AAETAAILNL-AGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred cChHHHHHHHHHHHHhCCC-e--EEEeCCHH-HHHHHHHHHh-cCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 3455788999999999985 3 46766666 6888888887 6889999999999988743 4456777899999997
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+. . |+++++ +++ +++|++|++.++.|++|.+.|+++|.++|++
T Consensus 141 ~~---~---------------d~e~l~--~~l------~~~tk~V~~e~~~Np~~~v~di~~I~~la~~----------- 183 (437)
T PRK05613 141 NP---D---------------DPESWQ--AAV------QPNTKAFFGETFANPQADVLDIPAVAEVAHR----------- 183 (437)
T ss_pred CC---C---------------CHHHHH--HhC------CccCeEEEEECCCCCCCcccCHHHHHHHHHH-----------
Confidence 21 1 356777 544 5678999999999999999999999999998
Q ss_pred CCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe
Q 010538 241 KGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR 289 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~ 289 (508)
+|+++++|++++.|.. .+..++++|++++|+||+++ +.| +|.+++.
T Consensus 184 -~gi~livD~t~a~g~~-~~p~~~GaDivv~S~~K~l~-G~gd~~gG~vv~ 231 (437)
T PRK05613 184 -NQVPLIVDNTIATAAL-VRPLELGADVVVASLTKFYT-GNGSGLGGVLID 231 (437)
T ss_pred -cCCeEEEECCCccccc-cChHHhCCCEEEeeccceec-CCCcceeEEEEe
Confidence 8999999999988765 34446789999999999999 544 5666663
No 228
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=3.6e-20 Score=175.62 Aligned_cols=339 Identities=15% Similarity=0.106 Sum_probs=239.3
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
..++-|-+.+.+.|.....++|.+.-..+ - .|.. ..-..++++.+|+++|-++. +|++++|+++.+
T Consensus 21 ~~~vDLRSDTvT~PTdeMr~am~eA~vgD----d--VyGe----D~tt~rLE~~vA~l~GKEAg----LFv~SGTmgNll 86 (384)
T KOG1368|consen 21 HRSVDLRSDTVTVPTDEMRRAMAEASVGD----D--VYGE----DPTTNRLEQRVAELFGKEAG----LFVPSGTMGNLL 86 (384)
T ss_pred eeccccccccccCChHHHHHHHhhcccCc----c--cccC----CccHHHHHHHHHHHhCccce----eeecccccccHH
Confidence 34566777778887777777765533211 1 1111 11245677899999999877 888999999999
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC--C
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER--D 196 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~--~ 196 (508)
++..-.-++|.+||+.+..|--.+..-......|+.++.+....++.+ ++++++ ++++-. +
T Consensus 87 aIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm---------------~ledIe--~~ir~~~GD 149 (384)
T KOG1368|consen 87 AIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTM---------------DLEDIE--AAIRVPKGD 149 (384)
T ss_pred HHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCCCCee---------------eHHHHH--HhhcCCCCC
Confidence 988876778999999998886655544444556889999888778877 689999 888622 3
Q ss_pred CCCCCceEEEEeCCCCCCc-cccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---CCCCCCCCCC--CCcEEE
Q 010538 197 PAGDAYNLFAFPSECNFSG-SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC---VTQPPDLSKY--PVDFVV 270 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~n~tG-~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~---g~~~~d~~~~--~~D~~~ 270 (508)
...|.|++|++.+-++.+| .++|++++.++.. +|++||+.++.||+--+ -...++++++ ..|.+.
T Consensus 150 ~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~---------lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVs 220 (384)
T KOG1368|consen 150 CHMPPTKLICLENTHNNCGGKVLPLEELDRVKA---------LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVS 220 (384)
T ss_pred ccCCCceEEEeeccccccCceEeeHHHHHHHHH---------HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhh
Confidence 4567899999988888887 9999998877766 66679999999998543 2233445544 478999
Q ss_pred EeccccccCCCcceEEEEechhHhhhccc--cccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 271 MSFYKIFGYPTGLGALIMRNDAAKLLKNT--YFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 271 ~S~~K~~g~P~G~G~l~~~~~~~~~l~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
.+++|.+|.|-| .+++.+++++++.+.. ..||+. --+++.+.+ ++--+++
T Consensus 221 iCLSKglgAPVG-SViVG~k~FI~kA~~~RKalGGGm--------------------------RQsGvLaaa-aLval~~ 272 (384)
T KOG1368|consen 221 ICLSKGLGAPVG-SVIVGSKDFIDKARHFRKALGGGM--------------------------RQSGVLAAA-ALVALDE 272 (384)
T ss_pred hhhhccCCCCcc-cEEEccHHHHHHHHHHHHHhcCch--------------------------hHHHHHHHH-HHHHhhc
Confidence 999999998976 7778888888765432 223332 111222222 1111222
Q ss_pred cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCee
Q 010538 349 LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQL 428 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v 428 (508)
. +. ..++-++++..+.+.+... +++++..+... .+|+.+.+... .++...+.+.++++||.+
T Consensus 273 ~-~~-~L~~dHk~A~~lAe~~~~~------~~i~v~v~a~e-------tNiv~~~l~q~---~~~~~~l~~~~~k~gi~l 334 (384)
T KOG1368|consen 273 N-VP-LLRADHKRAKELAEYINTP------EEIRVEVPAVE-------TNIVNMVLCQA---RLTAEELCKFLEKNGILL 334 (384)
T ss_pred c-hH-HHHHHHHHHHHHHHHhccc------cceeeecchhh-------cceeeeecccc---cCCHHHHHHHHHHCCeEE
Confidence 1 23 3455667777777777765 35877766443 78988887543 267778999999999998
Q ss_pred ccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh-hhhhhhh
Q 010538 429 RTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS-FDFVNFS 502 (508)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~-~~~~~~~ 502 (508)
..|. ...+|+++|+-.|.++++.+...+ +.|+.+.
T Consensus 335 m~~~---------------------------------------s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 335 MGGA---------------------------------------SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred eecc---------------------------------------ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 8763 345999999999999999999998 5555443
No 229
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.6e-19 Score=187.79 Aligned_cols=161 Identities=12% Similarity=0.081 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~ 162 (508)
...+.+++.+|++.|.+ ..++++|++.|+..++.++ +++|++|+++...|+..... ...++..|++++.++..
T Consensus 64 p~~~~Le~~lA~leg~~----~al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~- 137 (431)
T PRK08248 64 PTTDVFEKRIAALEGGI----GALAVSSGQAAITYSILNI-ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS- 137 (431)
T ss_pred chHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCC-
Confidence 34677889999999975 3577888899999999888 78899999998888765544 45577789999999863
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||||.+.|+++|.++|++ +
T Consensus 138 -------------------d~e~l~--~ai------~~~tklV~l~sp~NPtG~v~di~~I~~la~~------------~ 178 (431)
T PRK08248 138 -------------------DPENFE--AAI------TDKTKALFAETIGNPKGDVLDIEAVAAIAHE------------H 178 (431)
T ss_pred -------------------CHHHHH--Hhc------CCCCeEEEEECCCCCCCcccCHHHHHHHHHH------------c
Confidence 366777 554 4678999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-ceEEEEec
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-LGALIMRN 290 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~G~l~~~~ 290 (508)
|+++|+|++++.+....++ ++++|+++.|+||++|+|.. +|.+++.+
T Consensus 179 gi~vIvD~t~a~~~~~~pl-~~gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 179 GIPLIVDNTFASPYLLRPI-EHGADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred CCEEEEeCCCCccccCChh-HcCCCEEEEcCccccCCCCCceEEEEEeC
Confidence 9999999999865544444 57899999999999995632 78877753
No 230
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.84 E-value=6.9e-19 Score=182.27 Aligned_cols=262 Identities=16% Similarity=0.077 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEA 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~ 163 (508)
..+.+++.+|++.+. + ++++++|+++|+.+++.++ .++|++|+++...|++...... +....|+++..++..
T Consensus 52 ~~~~le~~lA~l~g~--~--~v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~-- 124 (382)
T TIGR02080 52 TRDLLQQALAELEGG--A--GAVVTNTGMSAIHLVTTAL-LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQG-- 124 (382)
T ss_pred hHHHHHHHHHHHhCC--C--cEEEEcCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCC--
Confidence 367788999999994 4 5899999999999999998 7899999999988886555433 345556777776421
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
|+++++ +++ +++|++|++++++||||.+.|+++|.++|++ +|
T Consensus 125 ------------------d~~~l~--~ai------~~~tklV~l~~p~NPtG~~~dl~~I~~la~~------------~g 166 (382)
T TIGR02080 125 ------------------DEQALR--AAL------AQKPKLVLIETPSNPLLRVVDIAKICHLAKA------------VG 166 (382)
T ss_pred ------------------CHHHHH--Hhc------CcCceEEEEECCCCCCCEecCHHHHHHHHHH------------cC
Confidence 356777 444 4578999999999999999999999999997 89
Q ss_pred eEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec-hhHhhhccccccCceEEecccchhhhhhcc
Q 010538 244 WMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
+++++|++++.+....++ ..++|+++.|++|+++++.+ .|++++++ +..+++....
T Consensus 167 ~~vvvD~a~~~~~~~~pl-~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~-------------------- 225 (382)
T TIGR02080 167 AVVVVDNTFLSPALQNPL-ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA-------------------- 225 (382)
T ss_pred CEEEEECCCcccccCCch-hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH--------------------
Confidence 999999999876543333 35789999999999886766 57777754 4444433210
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc------
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY------ 393 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~------ 393 (508)
.....+.+....+.+...++. +..+.++..+.+..+.+.|++.+ .++ ++-|.-. ..+
T Consensus 226 ----~~~g~~~sp~~a~l~lr~l~t-----l~~R~~~~~~na~~~a~~L~~~p------~v~~V~yP~l~-~~~~~~~~~ 289 (382)
T TIGR02080 226 ----NNLGVTGGAFDSYLTLRGLRT-----LVARMRLQQRNAQAIVEYLQTQP------LVKKIYYPGLP-DHPGHEIAA 289 (382)
T ss_pred ----HccCCCCCHHHHHHHHcccch-----HHHHHHHHHHHHHHHHHHHHhCC------CeeEEECCCCC-CCccHHHHH
Confidence 011122233322222223332 34445666788888888887763 453 3333211 000
Q ss_pred ---CCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccC
Q 010538 394 ---HDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTG 431 (508)
Q Consensus 394 ---~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g 431 (508)
..-+++++|.+++.. . ...++...|+--++.++-|
T Consensus 290 ~~~~g~g~~~s~~~~~~~-~--~~~~f~~~l~~~~~~~s~G 327 (382)
T TIGR02080 290 RQQKGFGAMLSFELKGGE-Q--TVRRFLGGLSLFTLAESLG 327 (382)
T ss_pred hhCCCCCceEEEEecCcH-H--HHHHHHHcCCcceEeccCC
Confidence 013779999996421 1 1123445555445555555
No 231
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.84 E-value=1.4e-18 Score=181.62 Aligned_cols=338 Identities=15% Similarity=0.082 Sum_probs=211.8
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++.-|+|..+. +..+|.+.+++.+.+. .. +.....+. .....++.++++++++.+ ++ ++++++|
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~-~~-~~~~~~~~-----~~~~~~la~~l~~~~~~~~~~--~v~~~~s 111 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLA-TL-GHVSNLFA-----TEPQIALAERLVELLGAPEGG--RVFFCNS 111 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHH-hc-cCccCccC-----CHHHHHHHHHHHHhCCCCCCC--EEEEeCc
Confidence 67778888652 3346778877755442 21 11111121 122356778889998854 46 8999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCccccccccccccccccchhhhhcCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
+++|+..++......+++.|+..+..|.........+ .|......+.... .....+ + -.|++.++ +
T Consensus 112 gsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~---~~d~~~l~--~ 178 (398)
T PRK03244 112 GAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALAL--TGQPAKRAPFEPLPGGVEHV------P---YGDVDALA--A 178 (398)
T ss_pred hHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhc--cCCcccccCCCCCCCCceEe------C---CCCHHHHH--H
Confidence 9999999988664333456666554444433222211 1221111111100 000000 0 01467777 5
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCC--CC--CC
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQ--PP--DL 261 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~--~~--d~ 261 (508)
.+ .+++++|++..++|++|.+.| +++|.++|++ +|+++|+|++|+. |.. .+ +.
T Consensus 179 ~~------~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~------------~~~llI~DEv~~g~gr~g~~~~~~~ 240 (398)
T PRK03244 179 AV------DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDR------------HGALLVLDEVQTGIGRTGAWFAHQH 240 (398)
T ss_pred hh------cCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEeccccCCcccchHHhhhh
Confidence 44 357899999999999999998 6788888887 9999999999862 211 11 22
Q ss_pred CCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 262 SKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 262 ~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
.....|++++ +|++++...+|++++++++.+.+.+...+. ....+...+++..+
T Consensus 241 ~~~~pDi~t~--sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~------------------------t~~~~~~~~aaa~a 294 (398)
T PRK03244 241 DGVTPDVVTL--AKGLGGGLPIGACLAFGPAADLLTPGLHGS------------------------TFGGNPVACAAALA 294 (398)
T ss_pred hCCCCCEEEE--chhhhCCcccEEEEEcHHHHhhccCCCCcC------------------------CCCCCHHHHHHHHH
Confidence 3335687655 598882223899999998876554321100 01234455666666
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
+++.+.+ +.+.+++.++.++|++.|+++.+ +.+.-+. + .+.++++.++.. ....+.+.+
T Consensus 295 ~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~----~~~~~v~--g-------~g~~~~i~~~~~-----~~~~~~~~l 353 (398)
T PRK03244 295 VLDTIAS---EGLLENAERLGEQLRAGIEALGH----PLVDHVR--G-------RGLLLGIVLTAP-----VAKAVEAAA 353 (398)
T ss_pred HHHHHHh---ccHHHHHHHHHHHHHHHHHhcCC----CceeeEe--e-------ccEEEEEEEecc-----HHHHHHHHH
Confidence 6665543 45678999999999999988621 1121111 1 278888888532 123478888
Q ss_pred hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 422 SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 422 ~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.++||.+++.. .+.+|++++..+|++|++++++.+.+.++.
T Consensus 354 ~~~Gv~~~~~~---------------------------------------~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 354 REAGFLVNAVA---------------------------------------PDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred HHCCeEEeecC---------------------------------------CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 89999987621 468999999999999999999999988765
Q ss_pred h
Q 010538 502 S 502 (508)
Q Consensus 502 ~ 502 (508)
+
T Consensus 395 ~ 395 (398)
T PRK03244 395 A 395 (398)
T ss_pred c
Confidence 4
No 232
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.84 E-value=8.8e-19 Score=182.65 Aligned_cols=240 Identities=15% Similarity=0.086 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccch-HHHHHHHHhcCCeEEEEccCCc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSV-LGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~-~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
..+.+++.+|++.|.+ +.+++++++.|+..++.++ .++|++|+++...|+.. ..+...++..|++++.++.+
T Consensus 71 ~~~~le~~lA~l~g~~----~al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-- 143 (403)
T PRK07810 71 TVSMFEERLRLIEGAE----ACFATASGMSAVFTALGAL-LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE-- 143 (403)
T ss_pred hHHHHHHHHHHHhCCC----cEEEECChHHHHHHHHHHH-hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC--
Confidence 3677899999999976 2566777778998888887 68899999998777554 44455677789999999753
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +|
T Consensus 144 ------------------d~~~l~--~ai------~~~tklV~~esp~Nptg~v~dl~~I~~la~~------------~g 185 (403)
T PRK07810 144 ------------------DLSQWE--EAL------SVPTQAVFFETPSNPMQSLVDIAAVSELAHA------------AG 185 (403)
T ss_pred ------------------CHHHHH--Hhc------CcCceEEEEECCCCCCCeecCHHHHHHHHHH------------cC
Confidence 366777 444 4678999999999999999999999999998 89
Q ss_pred eEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhh-hccccccCceEEecccchhhhhhcc
Q 010538 244 WMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKL-LKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~-l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
+++++|++++.+.....+ +.++|+++.|++|++++... .|+++.+++.+.. ++....
T Consensus 186 ~~vivD~a~a~~~~~~~~-~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~------------------- 245 (403)
T PRK07810 186 AKVVLDNVFATPLLQRGL-PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR------------------- 245 (403)
T ss_pred CEEEEECCCCccccCChh-hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHH-------------------
Confidence 999999999876553333 45799999999999984432 3777777765532 221110
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc------
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY------ 393 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~------ 393 (508)
.....++....+.+..+++. +..+.++..+.+.++.+.|++.+ .+. ++-|.-. ..+
T Consensus 246 -----~~g~~~s~~~a~l~l~~L~t-----l~~R~~~~~~~a~~~a~~L~~~p------~v~~V~yP~l~-~~p~~~~~~ 308 (403)
T PRK07810 246 -----HTGPALSAFNAWVLLKGLET-----LALRVRHSNASALRIAEFLEGHP------AVRWVRYPFLP-SHPQYDLAK 308 (403)
T ss_pred -----HhCCCCCHHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHhcCC------CccEEECCCCC-CCccHHHHH
Confidence 11122333333333334443 46666777788888888888764 443 3323111 000
Q ss_pred ---CCCCceEEEEeeC
Q 010538 394 ---HDTGSMVSFNLKR 406 (508)
Q Consensus 394 ---~~~~~~v~~~~~~ 406 (508)
..-+++++|.+++
T Consensus 309 ~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 309 RQMSGGGTVVTFELDA 324 (403)
T ss_pred hhCCCCceEEEEEEcC
Confidence 0127899999975
No 233
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=8.6e-19 Score=184.45 Aligned_cols=214 Identities=14% Similarity=0.031 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+++++++|++.+.+. .++++|++.|+.++.. + .++||+||++...|+++..+. ..+...|++++.++..
T Consensus 133 pt~~aLE~~lA~leg~e~----ai~~~SG~aAi~~il~-l-l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~- 205 (464)
T PLN02509 133 PTRDALESLLAKLDKADR----AFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT- 205 (464)
T ss_pred HHHHHHHHHHHHHhCCCE----EEEeCcHHHHHHHHHH-H-hCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC-
Confidence 457888999999998653 3555666778876664 4 588999999998888876554 3456789999888642
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +
T Consensus 206 -------------------d~e~l~--~ai------~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~------------~ 246 (464)
T PLN02509 206 -------------------NLDEVA--AAI------GPQTKLVWLESPTNPRQQISDIRKIAEMAHA------------Q 246 (464)
T ss_pred -------------------CHHHHH--HhC------CcCCeEEEEECCCCCCCCHHHHHHHHHHHHH------------c
Confidence 356677 444 5788999999999999999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhH-hhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAA-KLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|++++.+....++ ..++|++++|++|++++|.+ .|+++++++.+ +.+...
T Consensus 247 g~~lIVD~A~a~~~~~~pl-~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~-------------------- 305 (464)
T PLN02509 247 GALVLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------------------- 305 (464)
T ss_pred CCEEEEECCccccccCChh-hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHH--------------------
Confidence 9999999999887654333 35799999999999987766 57777765532 222211
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
+....+..+....+.+...++. ++.+.++..+.++++.+.|++.+
T Consensus 306 ----~~~~g~~l~p~~A~l~lr~L~t-----L~~R~~r~~~nA~~la~~L~~~p 350 (464)
T PLN02509 306 ----QNSEGSGLAPFDCWLCLRGIKT-----MALRIEKQQENARKIAMYLSSHP 350 (464)
T ss_pred ----HHhcCCCcCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHhcCC
Confidence 0001112233333333334443 46677888888999999998874
No 234
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.84 E-value=3.2e-19 Score=186.28 Aligned_cols=293 Identities=13% Similarity=0.070 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHcC------CCCCCceE--EEcCChHHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEE
Q 010538 86 VRAAREQVLDYFN------ASMKDYKC--IFTSGATAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAF 156 (508)
Q Consensus 86 ~~~~r~~la~~~~------~~~~~~~i--~~t~g~t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~ 156 (508)
....|+++++++. ++++ +| ++|+|+++|+.+++.++. ..+|++|++....|+.+....+ ..|++++
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~--~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~---~~g~~~v 145 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAG--RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFE---AAGLEVK 145 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccC--eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHH---HcCCcEE
Confidence 3455666666542 2565 66 999999999999987663 4789999999877776655544 4699999
Q ss_pred EEccC-C-ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccc
Q 010538 157 AIDVE-E-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERIL 234 (508)
Q Consensus 157 ~v~~~-~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~ 234 (508)
.+|.. . +..+ |++.++ +.+.+ ..+++.++++++++||||.+++.+++.++++
T Consensus 146 ~v~~~~~~~~~~---------------d~~~l~--~~~~~---~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~------ 199 (396)
T PRK09257 146 TYPYYDAATKGL---------------DFDAML--ADLSQ---APAGDVVLLHGCCHNPTGADLTPEQWDELAE------ 199 (396)
T ss_pred EEeccccccCcc---------------CHHHHH--HHHHh---CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHH------
Confidence 99973 2 2233 677777 55432 1245678888999999999999998888877
Q ss_pred ccCCCCCCCeEEEEeccccCCCCC-----CC---CCCC-CCcEEEEeccccccCCCc--ceEEEE--e-chhHhhhcccc
Q 010538 235 EISPFSKGRWMVLIDAAKGCVTQP-----PD---LSKY-PVDFVVMSFYKIFGYPTG--LGALIM--R-NDAAKLLKNTY 300 (508)
Q Consensus 235 ~~~~~~~~g~~vivD~a~~~g~~~-----~d---~~~~-~~D~~~~S~~K~~g~P~G--~G~l~~--~-~~~~~~l~~~~ 300 (508)
+|+++++++|+|.++..-... .. +... +.-+++.|++|.|+ |+| +||+++ . ++.+..+...+
T Consensus 200 ---~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-~~GlRiG~~~~~~~~~~~~~~~~~~~ 275 (396)
T PRK09257 200 ---LLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFG-LYGERVGALSVVAEDAEEADRVLSQL 275 (396)
T ss_pred ---HHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCc-cccccceeEEEEeCCHHHHHHHHHHH
Confidence 666799999999998631110 11 1111 23488999999999 778 899984 2 23322221110
Q ss_pred ccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH------HHhcChHHHHHHHHHHHHHHHHHHhcccC
Q 010538 301 FSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL------INSLTVPAICRHIASLGMYVRKVLLSLRH 374 (508)
Q Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~------~~~~g~~~i~~~~~~l~~~l~~~L~~l~~ 374 (508)
.. ..+...++++.....++...+.. +. ..++..++++++.++.+.+.|++..
T Consensus 276 ~~--------------------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~-~~~~~~r~~~~~rr~~l~~~L~~~~- 333 (396)
T PRK09257 276 KA--------------------TIRTNYSNPPAHGAAIVATILNDPELRAEWE-AELEEMRERIKAMRQLLVEALKAKG- 333 (396)
T ss_pred HH--------------------HhhhhcCCCcHHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 00 00001122222222333223221 11 1256678888999999999998762
Q ss_pred CCCCc-eEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhh
Q 010538 375 ENGAD-VCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSN 453 (508)
Q Consensus 375 ~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~ 453 (508)
.+ ++++..|.+ +.++|++++. ..+.+++.++||.+.+
T Consensus 334 ---~~~~~~~~~p~g--------g~~~w~~l~~--------~~~~~l~~~~~V~~~p----------------------- 371 (396)
T PRK09257 334 ---PSRDFDFIARQR--------GMFSYSGLTP--------EQVDRLREEFGVYAVG----------------------- 371 (396)
T ss_pred ---CCCCcccccccc--------eEEEecCCCH--------HHHHHHHHcCCEEEcC-----------------------
Confidence 01 244444433 6777776632 2366777888998743
Q ss_pred hhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 454 IEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.+ ||+++. .+.++++++++.|++.
T Consensus 372 ------------------~~--ri~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 372 ------------------SG--RINVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred ------------------CC--eEEEee-CCHHHHHHHHHHHHhh
Confidence 23 999974 5889999999998763
No 235
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.84 E-value=1.6e-19 Score=184.51 Aligned_cols=310 Identities=16% Similarity=0.100 Sum_probs=198.1
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceE-EEcCChHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKC-IFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i-~~t~g~t~ 114 (508)
.+.+-|- ++...++|.+.++.-. .+.+.| +.|+..++.|....+.++. +.+.++++|+++++.+.+ +=.-|++.
T Consensus 20 ~~~l~Li-aSEN~~Sp~v~~al~S-~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~ 97 (399)
T PF00464_consen 20 RSTLNLI-ASENYMSPAVREALGS-DLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQ 97 (399)
T ss_dssp HHSEE-C-TT-----HHHHHHHTS-GGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHH
T ss_pred hcCcccc-CcccccCHHHHHHhCC-cceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchH
Confidence 3455554 5566678888777544 444544 3566667767666665554 888899999999664222 23357778
Q ss_pred HHHHHHhhcCCCCCCeEEEecccccchH---HHHHH----HHhcCCeEEEEccCC-ccCccccccccccccccccchhhh
Q 010538 115 ALKLVGEAFPWSHQSSYMYTMENHNSVL---GIREY----ALSQGAAAFAIDVEE-AVDNDGLSESLVTSTKISLLPIQR 186 (508)
Q Consensus 115 al~~~~~~l~~~~g~~vl~~~~~h~s~~---~~~~~----~~~~G~~v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l 186 (508)
|+..++.+| .++||+|+..+..|...+ ..... +.....++...+++. .+.+ |.+++
T Consensus 98 An~av~~aL-l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~I---------------D~d~l 161 (399)
T PF00464_consen 98 ANLAVYMAL-LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLI---------------DYDEL 161 (399)
T ss_dssp HHHHHHHHH-T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB----------------HHHH
T ss_pred HHHHHHHHH-HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeE---------------CHHHH
Confidence 999999999 699999998876654332 11111 011235677778773 4555 57777
Q ss_pred hcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-----CCCCCCC
Q 010538 187 RKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-----VTQPPDL 261 (508)
Q Consensus 187 ~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-----g~~~~d~ 261 (508)
+ +.++ ..++++|++.... .-..+|.+++.++|++ .|+++++|.+|.. |..|-++
T Consensus 162 ~--~~a~-----~~kPklIi~G~S~--y~~~~d~~~~reIad~------------vga~l~~D~sH~~GLIa~g~~~~P~ 220 (399)
T PF00464_consen 162 E--KLAK-----EHKPKLIICGASS--YPRPIDFKRFREIADE------------VGAYLMADISHIAGLIAGGLFPNPF 220 (399)
T ss_dssp H--HHHH-----HH--SEEEEE-SS--TSS---HHHHHHHHHH------------TT-EEEEE-TTTHHHHHTTSS--GC
T ss_pred H--HHHh-----hcCCCEEEECchh--ccCccCHHHHHHHHHh------------cCcEEEecccccccceehheecCcc
Confidence 7 3332 2467888876533 3467889999999998 8999999999964 5555556
Q ss_pred CCCCCcEEEEeccccccCCCcceEEEEe--------------chhHhhhccccccCceEEecccchhhhhhccCcccccc
Q 010538 262 SKYPVDFVVMSFYKIFGYPTGLGALIMR--------------NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE 327 (508)
Q Consensus 262 ~~~~~D~~~~S~~K~~g~P~G~G~l~~~--------------~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (508)
.. +|++++|+||+|.||+| |+++.+ +++.+++...++.+.+
T Consensus 221 ~~--ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~q---------------------- 275 (399)
T PF00464_consen 221 PY--ADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQ---------------------- 275 (399)
T ss_dssp CT--SSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-----------------------
T ss_pred cc--ceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHHHHHHhccccCCCcc----------------------
Confidence 53 99999999998888997 999988 5566666655444322
Q ss_pred CCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC
Q 010538 328 DGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP 407 (508)
Q Consensus 328 ~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 407 (508)
|.+....++++..++....+...++..+++.++++.|.+.|.+. |++++...+. .++|++++...
T Consensus 276 -g~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-------G~~v~~ggTd-------~H~vlvd~~~~ 340 (399)
T PF00464_consen 276 -GGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-------GFKVVTGGTD-------NHQVLVDLRSF 340 (399)
T ss_dssp -SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-------T-EEGGGS-S-------SSEEEEEGGGG
T ss_pred -cCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-------CcEEEECCCC-------CCeEEEEeccc
Confidence 55677889999999988655556899999999999999999987 8999975543 89999998642
Q ss_pred CCCccCHHHHHHHHhhCCCeecc
Q 010538 408 DGSWFGYREVEKLASLSGIQLRT 430 (508)
Q Consensus 408 ~~~~~~~~~l~~~L~~~gI~v~~ 430 (508)
. ++...+.+.|++.||.+..
T Consensus 341 ~---~~g~~a~~~Le~~gI~vnk 360 (399)
T PF00464_consen 341 G---IDGKEAEKALEEAGIIVNK 360 (399)
T ss_dssp T---S-HHHHHHHHHHTTEE-EE
T ss_pred c---cchHHHHHHHHhcCeeecc
Confidence 1 3445688999999999864
No 236
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=6.7e-19 Score=172.30 Aligned_cols=346 Identities=14% Similarity=0.076 Sum_probs=227.3
Q ss_pred CCeeeeCCCCC-----CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC------CCCCCceEEE
Q 010538 40 GTVYLDHAGAT-----LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN------ASMKDYKCIF 108 (508)
Q Consensus 40 ~~iyld~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~~i~~ 108 (508)
.++-|.++-.+ ...+.+.+|+.+...... ...|. .......+|+++|++++ ..++ +|++
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk----~N~Ya----ps~G~~~AR~AVAeYl~~~l~~kl~a~--DV~l 131 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK----GNGYA----PSVGILPARRAVAEYLNRDLPNKLTAD--DVVL 131 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCC----CCCcC----CccccHHHHHHHHHHhhcCCCCccCcC--ceEE
Confidence 56777764332 335667777777654321 12222 23346789999999976 3566 8999
Q ss_pred cCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhc
Q 010538 109 TSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRK 188 (508)
Q Consensus 109 t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~ 188 (508)
|+|+++|+.+++.++ .++|..|+++...||-+.. .+...|++|+..++-.+..++ -|++.++
T Consensus 132 tsGC~qAIe~~i~~L-A~p~aNILlPrPGfp~Y~~---~a~~~~lEVR~ydlLPe~~we-------------IDL~~ve- 193 (447)
T KOG0259|consen 132 TSGCSQAIELAISSL-ANPGANILLPRPGFPLYDT---RAIYSGLEVRYYDLLPEKDWE-------------IDLDGVE- 193 (447)
T ss_pred eccchHHHHHHHHHh-cCCCCceecCCCCCchHHH---hhhhcCceeEeecccCcccce-------------echHHHH-
Confidence 999999999999999 5899999999877765543 344569999999875443331 1788888
Q ss_pred CCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc---CCCCC-CCCCCC
Q 010538 189 GASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG---CVTQP-PDLSKY 264 (508)
Q Consensus 189 ~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~---~g~~~-~d~~~~ 264 (508)
..++++|..+++.+++||.|.+++.+-+.+++. .|+++|++||.|+++. +|-.| +.+.+.
T Consensus 194 -------al~DENT~AivviNP~NPcGnVys~~HL~kiae---------~A~klgi~vIaDEVY~~~vfg~~pfvpmg~f 257 (447)
T KOG0259|consen 194 -------ALADENTVAIVVINPNNPCGNVYSEDHLKKIAE---------TAKKLGIMVIADEVYGHTVFGDKPFVPMGKF 257 (447)
T ss_pred -------HhhccCeeEEEEeCCCCCCcccccHHHHHHHHH---------HHHHhCCeEEehhhcceeecCCCCccchhhc
Confidence 444788999999999999999999776666655 4555999999999975 23322 233322
Q ss_pred ---CCcEEEEeccc-cccCCCc--ceEEEEechhHhhhccccc-cCceEEecccchhhhhhccCccccccCCCCChhHHH
Q 010538 265 ---PVDFVVMSFYK-IFGYPTG--LGALIMRNDAAKLLKNTYF-SGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIA 337 (508)
Q Consensus 265 ---~~D~~~~S~~K-~~g~P~G--~G~l~~~~~~~~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 337 (508)
=.-+.++|.+| |+- | | +||+++++..- -++.... .+ ...+ .-....|++.-..
T Consensus 258 ssiVPVitlggisKrW~V-P-GWRlGWi~~hD~~g-vf~~~~~~q~--------~~~~---------~~~~~~p~TiiQ~ 317 (447)
T KOG0259|consen 258 SSIVPVITLGGISKRWIV-P-GWRLGWIALHDPRG-VFRDTKVVQG--------IKNF---------LDIIPGPATIIQG 317 (447)
T ss_pred cccCceEeeccccccccc-C-CceeeeEEEecccc-cccchHHHHH--------HHHH---------HhccCCccHhHHH
Confidence 22366789999 776 8 6 99999986531 1221100 00 0001 0112334444344
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC--CCCccCHH
Q 010538 338 SIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP--DGSWFGYR 415 (508)
Q Consensus 338 ~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~ 415 (508)
|+-.-|+--.+.-.+....-++..++...+.|+.++ +++....+.. ..++++.+.-. ..-+-|..
T Consensus 318 AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP------~l~cp~kPeg-------~mylmv~l~~s~~~~~~dD~d 384 (447)
T KOG0259|consen 318 ALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIP------CLTCPVKPEG-------CMYLMVKLNLSLFPDIEDDVD 384 (447)
T ss_pred HhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCC------CcccCcCCCc-------ceEEEeccchhhhccccccHH
Confidence 443333332333466777888889999999999994 6764333321 56666665321 11111334
Q ss_pred HHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 416 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 416 ~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
...++.+++.+++-+|..+. .++++|+++.. ..+.++...++|
T Consensus 385 Fc~kL~~Eesv~~LPG~af~-----------------------------------~~nw~Ri~i~~--~~~~leea~~Ri 427 (447)
T KOG0259|consen 385 FCQKLAREESVICLPGQAFG-----------------------------------LKNWLRIVITV--EEEMLEEAFSRI 427 (447)
T ss_pred HHHHHhhhcceEEecccccc-----------------------------------CCCeEEEEEcc--ChHHHHHHHHHH
Confidence 46677788999999986432 27999999985 678888989998
Q ss_pred hhhh
Q 010538 496 FDFV 499 (508)
Q Consensus 496 ~~~~ 499 (508)
+.|-
T Consensus 428 k~Fc 431 (447)
T KOG0259|consen 428 KEFC 431 (447)
T ss_pred HHHH
Confidence 8874
No 237
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.3e-19 Score=187.77 Aligned_cols=297 Identities=14% Similarity=0.038 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHcC------CCCCCceEE--EcCChHHHHHHHHh---hcCCCCCCeEEEecccccchHHHHHHHHhcCCe
Q 010538 86 VRAAREQVLDYFN------ASMKDYKCI--FTSGATAALKLVGE---AFPWSHQSSYMYTMENHNSVLGIREYALSQGAA 154 (508)
Q Consensus 86 ~~~~r~~la~~~~------~~~~~~~i~--~t~g~t~al~~~~~---~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~ 154 (508)
..+.|+++++++. ++++ +|+ .|.|++.|+.+++. ++ ..+|++|++....|+.+... ++..|++
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~~~~~~---~~~~G~~ 147 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSNPTWPNHVNI---FKSAGLN 147 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHH---HHHcCCc
Confidence 4566777777642 3566 787 48999999988765 45 57899999888666666544 4456999
Q ss_pred EEEEccCC--ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcc
Q 010538 155 AFAIDVEE--AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPER 232 (508)
Q Consensus 155 v~~v~~~~--~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~ 232 (508)
++.+|+.+ +..+ |++.++ +++++. .++++++++++++||||.+++.+++.++++
T Consensus 148 ~~~v~l~~~~~~~~---------------d~~~l~--~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~---- 203 (404)
T PTZ00376 148 VKEYRYYDPKTKGL---------------DFDGML--EDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIAD---- 203 (404)
T ss_pred eeeccccCcccCCc---------------CHHHHH--HHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHH----
Confidence 99999842 2233 567777 555321 345688889999999999999998888877
Q ss_pred ccccCCCCCCCeEEEEeccccCCCCC---------CCCCCC-CCcEEEEeccccccCCCc--ceEEE---EechhHhhhc
Q 010538 233 ILEISPFSKGRWMVLIDAAKGCVTQP---------PDLSKY-PVDFVVMSFYKIFGYPTG--LGALI---MRNDAAKLLK 297 (508)
Q Consensus 233 ~~~~~~~~~~g~~vivD~a~~~g~~~---------~d~~~~-~~D~~~~S~~K~~g~P~G--~G~l~---~~~~~~~~l~ 297 (508)
+|++|+++||+|.++..-... ..+... +.-+++.|++|.|+ .+| +||++ .+++.++.+.
T Consensus 204 -----~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-~~GlRvG~~~~~~~~~~~~~~l~ 277 (404)
T PTZ00376 204 -----VMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMG-LYGERIGALHIVCANKEEAANVL 277 (404)
T ss_pred -----HHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccc-ccccccceEEEEeCCHHHHHHHH
Confidence 566799999999997531110 011111 12488899999999 667 89984 4655443332
Q ss_pred cccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH---HHh--cChHHHHHHHHHHHHHHHHHHhcc
Q 010538 298 NTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL---INS--LTVPAICRHIASLGMYVRKVLLSL 372 (508)
Q Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~---~~~--~g~~~i~~~~~~l~~~l~~~L~~l 372 (508)
.....- .. ...++.+.....++..+++. ..+ ..++..++++++.++.+.+.|++.
T Consensus 278 ~~~~~~-------------------~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 278 SQLKLI-------------------IR-PMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHH-------------------Hh-hhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 110000 00 01112222223333333321 001 014556678889999999999876
Q ss_pred cCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhh
Q 010538 373 RHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLS 452 (508)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~ 452 (508)
.. ..++.++.+.+ +.++|++++. ....++++++||.+.+|
T Consensus 338 ~~---~~~~~~~~p~g--------g~f~~~~~~~--------~~~~~L~~~~~v~v~p~--------------------- 377 (404)
T PTZ00376 338 GS---PGDWEHIINQI--------GMFSFTGLTK--------EQVERLIEKYHIYLLDN--------------------- 377 (404)
T ss_pred CC---CCcccccccCc--------eEEEecCCCH--------HHHHHHHHhCCEeecCC---------------------
Confidence 21 01234444432 5677766532 12334445569987552
Q ss_pred hhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 453 NIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
+ |||++. .+.++++.++++|++++..
T Consensus 378 --------------------~--Ris~~~-~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 378 --------------------G--RISVAG-LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred --------------------C--eEEEec-cCHHhHHHHHHHHHHHHhc
Confidence 2 999964 6899999999999998764
No 238
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.5e-18 Score=179.56 Aligned_cols=215 Identities=12% Similarity=0.037 Sum_probs=149.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHH-HHHHHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLG-IREYALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~-~~~~~~~~G~~v~~v~~~ 161 (508)
......+++.+|++.|++.. +++.+ ++.++.+++. + .++|++|+++...|++... +.+.+...|++++.++..
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~---~~~~s-G~aai~~~~~-~-l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 122 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAG---FAFGS-GMAAITAVMM-L-FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTS 122 (377)
T ss_pred ChHHHHHHHHHHHHhCCCce---EEeCC-HHHHHHHHHH-H-hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCC
Confidence 44577889999999998654 55544 5567776654 4 5789999999988885443 445667789999988742
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++
T Consensus 123 --------------------d~~~l~--~ai------~~~tklV~le~P~NPtg~~~dl~~I~~la~~------------ 162 (377)
T PRK07671 123 --------------------NLEEVE--EAI------RPNTKAIYVETPTNPLLKITDIKKISTIAKE------------ 162 (377)
T ss_pred --------------------CHHHHH--Hhc------CCCCeEEEEECCCCCCCcccCHHHHHHHHHH------------
Confidence 366777 444 5688999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec-hhHhhhccccccCceEEecccchhhhhh
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
+|+++++|++++.+.....+ ..++|+++.|++|++++|.+ .|++++++ ++.+++...
T Consensus 163 ~g~~lvvD~a~~~~~~~~p~-~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~------------------- 222 (377)
T PRK07671 163 KGLLTIVDNTFMTPYWQSPI-SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFV------------------- 222 (377)
T ss_pred cCCEEEEECCCCccccCChh-hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHH-------------------
Confidence 89999999998754432222 45789999999999997864 46676654 444443321
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
+....+..+....+.+...++. +..+.++..+.+..+.+.|++.+
T Consensus 223 -----~~~~g~~~~~~~a~l~~~~l~t-----l~~R~~~~~~na~~la~~L~~~~ 267 (377)
T PRK07671 223 -----QNSTGGILGPQDSWLLLRGLKT-----LGIRMEEHETNSRAIAEFLNNHP 267 (377)
T ss_pred -----HHhhcCCCCHHHHHHHHcCcCh-----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 0111222332222222222222 44566777788888888888764
No 239
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.83 E-value=1.9e-18 Score=178.86 Aligned_cols=162 Identities=14% Similarity=0.088 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~ 161 (508)
......+++++|++.|++.. +++ ++++.|+.+++. + .++|++|+++...|++.... ...+...|+++..++..
T Consensus 49 ~p~~~~Le~~la~l~g~~~a---l~~-~SG~~Al~~~l~-~-l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~ 122 (380)
T PRK06176 49 NPTRFALEELIADLEGGVKG---FAF-ASGLAGIHAVFS-L-FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS 122 (380)
T ss_pred ChhHHHHHHHHHHHhCCCCE---EEE-CCHHHHHHHHHH-H-cCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCC
Confidence 34467789999999997654 555 555668887775 4 47899999998888766544 34567789999888753
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++||+
T Consensus 123 --------------------d~e~l~--~ai------~~~t~lV~lesP~Nptg~~~di~~I~~la~~------------ 162 (380)
T PRK06176 123 --------------------DLSQIK--KAI------KPNTKALYLETPSNPLLKITDLAQCASVAKD------------ 162 (380)
T ss_pred --------------------CHHHHH--Hhc------CcCceEEEEECCCCCCceecCHHHHHHHHHH------------
Confidence 366777 444 4678999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEech
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRND 291 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~ 291 (508)
+|+++++|++++.+....++ .+++|++++|++|++++|.. .|+++.+++
T Consensus 163 ~gi~vivD~t~a~~~~~~p~-~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~ 213 (380)
T PRK06176 163 HGLLTIVDNTFATPYYQNPL-LLGADIVVHSGTKYLGGHSDVVAGLVTTNNE 213 (380)
T ss_pred cCCEEEEECCccccccCCcc-ccCCCEEEecCceeccCCccceeeEEEecHH
Confidence 89999999999876543333 46899999999999987753 466666543
No 240
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.82 E-value=2.8e-17 Score=169.96 Aligned_cols=331 Identities=14% Similarity=0.099 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
...+++.+.++++++.+ .+++|+|+|+|+.+++.++..++|++|+++...|+++...+ ...|++++.++++.+
T Consensus 31 ~~~~~~e~~la~~~g~~----~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~---~~~G~~~v~vd~d~~ 103 (376)
T TIGR02379 31 PFSRRCETWLENRTGTK----KALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF---VLRGAKIVFVDIRPD 103 (376)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH---HHcCCEEEEEecCCC
Confidence 34677888899998774 68999999999999998886789999999998887765443 456999999999864
Q ss_pred c-CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 164 V-DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 164 ~-~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
. .+ |+++++ +++ +++|++|+. ++++|...|+++|.++|++ +
T Consensus 104 ~~~~---------------d~~~le--~~i------~~~tk~Iip---~~~~G~~~d~~~I~~la~~------------~ 145 (376)
T TIGR02379 104 TMNI---------------DETLIE--SAI------THRTKAIVP---VHYAGVACDMDTIMALANK------------H 145 (376)
T ss_pred cCCC---------------CHHHHH--Hhc------CcCceEEEE---eCCCCCccCHHHHHHHHHH------------C
Confidence 3 34 678888 554 567898874 4579999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCCCC--cEEEEeccc--ccc-CCCcceEEEEe-chhHhhhccccccCceEE-ecc-cchh
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPV--DFVVMSFYK--IFG-YPTGLGALIMR-NDAAKLLKNTYFSGGTVA-ASI-ADID 314 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~--D~~~~S~~K--~~g-~P~G~G~l~~~-~~~~~~l~~~~~g~~~~~-~~~-~~~~ 314 (508)
|++||+|++|+.|.. .+-...+. |+.++|+|+ .+. |+.| |+++.+ +++.+++++....|.... ... ....
T Consensus 146 ~i~vIeDaa~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 223 (376)
T TIGR02379 146 QLFVIEDAAQGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEG-GALLINDQAFIERAEIIREKGTNRSQFFRGEVDK 223 (376)
T ss_pred CCEEEEECccccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCc-eEEEECCHHHHHHHHHHHHhCCCCccccccCCCc
Confidence 999999999998764 33333333 788888876 344 2334 777776 566666665543221100 000 0000
Q ss_pred hhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce-EEEec-CCCCCcc
Q 010538 315 FVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV-CTIYG-TYTSEVS 392 (508)
Q Consensus 315 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~-~~~~~-~~~~~~~ 392 (508)
+. .......++. +-.+.+...+.++. ++.+.++-++..++..+.|..+.. .+ +++.. +...
T Consensus 224 ~~--~~~~g~n~~~---~~~~Aa~g~~qL~~-----l~~~~~~r~~~~~~y~~~L~~~~~----~~~~~~~~~~~~~--- 286 (376)
T TIGR02379 224 YT--WRDIGSSYLP---SELQAAYLWAQLEQ-----ADRINQDRLATWQLYQDALKPLEE----KGIIELPSIPNGC--- 286 (376)
T ss_pred ce--eeeecccCCc---cHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHhccCCc----CCeeeCCCCCCCC---
Confidence 00 0000111111 11111111233443 355556666777777777766521 11 22221 1111
Q ss_pred cCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhh---cCCChhhhhhhhhcCCccCCCccccCC
Q 010538 393 YHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKY---LGLSHSDLLSNIEAGHVCWDDNDIIHG 469 (508)
Q Consensus 393 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~---~~~~~s~~~~~~~~~~~~~~~~~~~~~ 469 (508)
....++.++.++.. .+..++.+.|.++||.++.+...... +++ ++..+.+...+ ..
T Consensus 287 -~~~~~~~~i~~~~~----~~r~~l~~~L~~~gI~~~~~~~p~~~--~~~~~~~~~~~~~~p~~--------------~~ 345 (376)
T TIGR02379 287 -QHNAHMFYIKLKDE----DDRNELIKYLKEQEIMAVFHYVPLHS--SPAGRYFGRFHGEDIYT--------------TK 345 (376)
T ss_pred -eeeeEEEEEEECCc----CCHHHHHHHHHHCCCCccccCcCCCc--chhHHhhCCCCCCChHH--------------HH
Confidence 01123445555431 24457999999999998764321111 110 00000000000 01
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 470 KPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 470 ~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
.....+.+-+|..-|.+|++++++.+++++
T Consensus 346 ~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 346 ESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred HHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 125679999999999999999999998764
No 241
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.82 E-value=1.1e-17 Score=174.78 Aligned_cols=327 Identities=14% Similarity=0.086 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
..++++.+++++|.+ .+++|+|+|+|+.+++.++ .++|++| ++...++++...+. ..|++++.++.+....
T Consensus 55 ~~~Leeaia~~~g~~----~vv~t~~Gt~Al~la~~al-~~pGD~V-~~~~~f~~~~~~i~---~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 55 FYDLEDAVQDLFGFK----HIIPTHQGRGAENILFSIL-LKPGRTV-PSNMHFDTTRGHIE---ANGAVPVDLVIDEAHD 125 (431)
T ss_pred HHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHHHHh-CCCCCEE-ccCCcccchHHHHH---hCCCEeEEEecccccc
Confidence 567889999999985 6899999999999999998 6789977 45555555544433 4599999999864321
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCC-ccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFS-GSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~t-G~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
.+ +..+.+..+|+++++ +++.++ ..+++++|+++.++|++ |..++.+.|.++++ +|+++|+
T Consensus 126 ~~-----~~~pf~gniD~e~Le--~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~e---------ia~~~gi 187 (431)
T cd00617 126 AQ-----ELIPFKGNIDVAKLE--KLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRE---------LAHKYGI 187 (431)
T ss_pred cc-----cccCCCCCcCHHHHH--HHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHH---------HHHHcCC
Confidence 00 000111123799999 777432 12458999999999998 99998876654444 4445999
Q ss_pred EEEEeccccCC-----------CCCCCCCC------CCCcEEEEeccccccCCCcceEEEEec-hhHhhhccccccCceE
Q 010538 245 MVLIDAAKGCV-----------TQPPDLSK------YPVDFVVMSFYKIFGYPTGLGALIMRN-DAAKLLKNTYFSGGTV 306 (508)
Q Consensus 245 ~vivD~a~~~g-----------~~~~d~~~------~~~D~~~~S~~K~~g~P~G~G~l~~~~-~~~~~l~~~~~g~~~~ 306 (508)
+||.|+++..+ ....++.+ ...|.+++|++|.++.|.| |+++.++ +++++++...+..
T Consensus 188 ~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~~~~~~~~~--- 263 (431)
T cd00617 188 PVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRVVLY--- 263 (431)
T ss_pred EEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHHHHHhcccc---
Confidence 99999997642 33333322 1479999999997665765 7888887 4766655321100
Q ss_pred EecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecC
Q 010538 307 AASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGT 386 (508)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~ 386 (508)
+.....|..+...+.++..+++...+ .+.+.++ .+.+++|.+.|.+. |+.+..|
T Consensus 264 ----------------~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~-~~~r~~l~~~L~~~-------G~~v~~P 317 (431)
T cd00617 264 ----------------EGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHR-VEQVRYLGDRLDEA-------GVPIVEP 317 (431)
T ss_pred ----------------CCccccccccHHHHHHHHHHHHhccc--HHHHHHH-HHHHHHHHHHHHHC-------CCCccCC
Confidence 11112355566666666556653211 2334344 44569999999987 6877776
Q ss_pred CCCCcccCCCCceEEEEeeC----CCCCccCHHHHH-HHHhhCCCeec-cCCCCCchHHHhhcCCChhhhhhhhhcCCcc
Q 010538 387 YTSEVSYHDTGSMVSFNLKR----PDGSWFGYREVE-KLASLSGIQLR-TGCFCNPGACAKYLGLSHSDLLSNIEAGHVC 460 (508)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~l~-~~L~~~gI~v~-~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 460 (508)
.+ ++.++++++. .+..+++...+. +++.+.||.+. -|....+..
T Consensus 318 ~G--------gh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~---------------------- 367 (431)
T cd00617 318 AG--------GHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD---------------------- 367 (431)
T ss_pred Cc--------ceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC----------------------
Confidence 54 7888888763 222333444455 67788899964 344221110
Q ss_pred CCCcc-ccCCCCCceEEEecCC-CCCHHHHHHHHHhhhhhhhh
Q 010538 461 WDDND-IIHGKPTGAIRVSFGY-MSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 461 ~~~~~-~~~~~~~~~iRis~~~-~~t~eev~~l~~~~~~~~~~ 501 (508)
++. ......-..+|+++.- --|.++++.+++++.++.+-
T Consensus 368 --~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 368 --PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred --CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 000 0000013679999873 35899999999999888654
No 242
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.7e-18 Score=179.29 Aligned_cols=159 Identities=14% Similarity=0.097 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCCc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~~ 163 (508)
....+++.+|++.|.+. .+++++++.|+.+++.++ .++|++||++...|++..... ..+...|++++.++.+
T Consensus 64 ~~~~le~~lA~l~g~~~----al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (427)
T PRK05994 64 TNAVLEERVAALEGGTA----ALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-- 136 (427)
T ss_pred cHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC--
Confidence 46678899999999874 367788888999999988 788999999988887765443 3466789999988753
Q ss_pred cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC
Q 010538 164 VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g 243 (508)
|+++++ +++ +++|++|++++++||+|.+.|+++|.++|++ +|
T Consensus 137 ------------------d~~~l~--~ai------~~~tklV~vesp~NptG~v~dl~~I~~la~~------------~g 178 (427)
T PRK05994 137 ------------------DPASFE--RAI------TPRTKAIFIESIANPGGTVTDIAAIAEVAHR------------AG 178 (427)
T ss_pred ------------------CHHHHH--Hhc------CcCCeEEEEECCCCCCCeecCHHHHHHHHHH------------cC
Confidence 356677 444 4679999999999999999999999999998 89
Q ss_pred eEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-ceEEEEe
Q 010538 244 WMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-LGALIMR 289 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~G~l~~~ 289 (508)
+++++|++++.+.....+ +.++|+++.|+||++|++.| +|.+++.
T Consensus 179 i~livD~a~a~~~~~~pl-~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 179 LPLIVDNTLASPYLIRPI-EHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred CEEEEECCccccccCCcc-ccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 999999999876644333 56899999999999996655 6777764
No 243
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.82 E-value=1.8e-17 Score=173.37 Aligned_cols=326 Identities=13% Similarity=0.107 Sum_probs=208.0
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .|.-+|.+.+++.+.+.. . ....... ......++.+.++++++. + .+++++|+
T Consensus 39 ~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~-~-~~~~~~~-----~~~~~~~l~~~l~~~~~~--~--~~~~~~SG 107 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGR-L-TLTSRAF-----RNDQLAPLYEELAALTGS--H--KVLPMNSG 107 (401)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhh-c-ccccccc-----CCHHHHHHHHHHHhhCCC--C--EEEEeCCc
Confidence 6777888533 222388888887665432 1 1111111 123566778889999875 3 68999999
Q ss_pred HHHHHHHHhhcCC--------CCC-CeEEEec-ccccchHHHHHHHHh---------cCCeEEEEccCCccCcccccccc
Q 010538 113 TAALKLVGEAFPW--------SHQ-SSYMYTM-ENHNSVLGIREYALS---------QGAAAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 113 t~al~~~~~~l~~--------~~g-~~vl~~~-~~h~s~~~~~~~~~~---------~G~~v~~v~~~~~~~~~~l~~~~ 173 (508)
++|+..++..+.. +.| +.|++.. .-|.+.......... ....+..+|.
T Consensus 108 s~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 174 (401)
T PRK00854 108 AEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF------------- 174 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------------
Confidence 9999988877621 122 4555554 445544433321100 0011222221
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
.|+++++ +.+ .+++++|++.+++|++|.+.| +++|.++|++ ||+++|+|
T Consensus 175 -------~d~~~le--~~i------~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~------------~gi~lI~D 227 (401)
T PRK00854 175 -------GDAEALE--AAI------TPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTA------------NNVTLILD 227 (401)
T ss_pred -------CCHHHHH--HHh------CCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEe
Confidence 1467777 444 467899999999999999998 7888888887 99999999
Q ss_pred cccc-CCCCCC----CCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQPP----DLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~~~----d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
++|+ +|..+. +......|++++| |++++-. -+|+++.+++.++.+.+...+
T Consensus 228 Ev~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~~~~~--------------------- 284 (401)
T PRK00854 228 EIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKPGQHG--------------------- 284 (401)
T ss_pred chhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhcccCCCCC---------------------
Confidence 9998 554431 1222346888875 9877321 278899999887655432110
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 324 ELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 324 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
...+ .+....++..++++.+.+ +.+.++.+++.+++.+.|+++. ......... .+.++.+.
T Consensus 285 --~t~~-~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-------~~~~~~~~g------~g~~~~i~ 345 (401)
T PRK00854 285 --STFG-GNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-------SNIVREVRG------RGLMLAVE 345 (401)
T ss_pred --CCCC-cCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-------cCceEEEec------cceEEEEE
Confidence 0112 255556677778887654 3356888889999999998762 111111111 15666666
Q ss_pred eeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC
Q 010538 404 LKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS 483 (508)
Q Consensus 404 ~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 483 (508)
+.... ....++.+.|.++||.+... ..+.+|+++++.+
T Consensus 346 ~~~~~---~~~~~~~~~L~~~GV~v~~~---------------------------------------~~~~lR~~p~~~~ 383 (401)
T PRK00854 346 LEPEA---GGARQYCEALKERGLLAKDT---------------------------------------HDHTIRLAPPLVI 383 (401)
T ss_pred EecCc---hhHHHHHHHHHHCCeEEecC---------------------------------------CCCEEEEeCCccc
Confidence 53321 12345888888899998541 1468999999999
Q ss_pred CHHHHHHHHHhhhhhh
Q 010538 484 TFEDAKVNRCSSFDFV 499 (508)
Q Consensus 484 t~eev~~l~~~~~~~~ 499 (508)
|++||+++++.+++++
T Consensus 384 t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 384 TREQVDWALEQIAKVL 399 (401)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998765
No 244
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.82 E-value=2.9e-18 Score=160.69 Aligned_cols=350 Identities=15% Similarity=0.089 Sum_probs=234.0
Q ss_pred CCCeeeeCCC-CCCCCHHHHHHHHHHhhccccCCCCCccc-h--hh---hhhHHHHHHHHHHHHHcCCCCCCceEEEcCC
Q 010538 39 NGTVYLDHAG-ATLYSELQMEAIFRDFTTNVYGNPHSQSD-I--SL---ATCDIVRAAREQVLDYFNASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g 111 (508)
.+.|.+|--- .+.+++.+.+++.+ +- +-.+... . |. -...-+.+..+.+++++|++ .+-+|.|
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E-~g-----DGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D----~~R~t~G 84 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLE-WG-----DGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD----EVRVTAG 84 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHH-hc-----CCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc----eeeeccc
Confidence 4566666533 55567777666654 22 2222111 0 00 01122556677799999997 4689999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 112 ATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 112 ~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
+-+|=-.++.++ .+.|+.|++....|.+.+-. +++.|..|..||-.+.... +| +++... ..
T Consensus 85 ARe~KfavMhal-~~~gd~vV~D~~aHYttyvA---AEragl~v~eVp~tg~Pey-----------~i--~~e~y~--~v 145 (382)
T COG1103 85 AREAKFAVMHAL-CKEGDWVVVDSLAHYTTYVA---AERAGLNVAEVPNTGYPEY-----------KI--TPEGYA--EV 145 (382)
T ss_pred chhhHHHHHHHh-ccCCCEEEEcCcchHHHHHH---HHhcCCeEEecCCCCCCce-----------Ee--cHHHHH--HH
Confidence 999999999999 68899999998888765544 3456999999996542221 00 344433 22
Q ss_pred CCCC-CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEE
Q 010538 192 FPER-DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVV 270 (508)
Q Consensus 192 l~~~-~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~ 270 (508)
|++- ...++.+.+..++|+....|.+.|.+.++++|++ +|+++++.++++.|.+|++.++.++||++
T Consensus 146 iee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e------------~gvPlllN~AYt~Grmpvs~ke~g~DFiV 213 (382)
T COG1103 146 IEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICRE------------YGVPLLLNCAYTVGRMPVSGKEIGADFIV 213 (382)
T ss_pred HHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHH------------cCCceEeecceeeccccccccccCCCEEE
Confidence 2211 1123568999999999999999999999999998 99999999999999999999999999999
Q ss_pred EeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcC
Q 010538 271 MSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLT 350 (508)
Q Consensus 271 ~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g 350 (508)
+|+||.++.-+-+|+|-++.+..+..-+.. +. .|. ..+--+-.+|.-...++.+.+++-...+.
T Consensus 214 gSGHKsmAAs~PiGvl~~~eE~ae~V~r~S--g~---------~~~----~KEvellGCT~rGapivTlmASfP~V~eR- 277 (382)
T COG1103 214 GSGHKSMAASAPIGVLAMSEEWAEIVLRRS--GR---------AFP----KKEVELLGCTVRGAPIVTLMASFPHVVER- 277 (382)
T ss_pred ecCccchhccCCeeEEeehhHHHHHHHhhc--cc---------ccc----cceeeeecccccCchHHHHHhcCHHHHHH-
Confidence 999997773323999999998866433221 10 000 00111223444444566666676654432
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC-------CCCccCHHHHHHHHhh
Q 010538 351 VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP-------DGSWFGYREVEKLASL 423 (508)
Q Consensus 351 ~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~l~~~L~~ 423 (508)
-..+....+.++++.++|+++. |++.++.... .--.+.|..+.. +... ..+.+.|++
T Consensus 278 -VkrWdeEv~kaR~fv~elEkig------g~~qlG~rPk------~HdLm~Fetp~f~eIakk~~r~g---yFlY~ELK~ 341 (382)
T COG1103 278 -VKRWDEEVEKARWFVAELEKIG------GVKQLGERPK------NHDLMKFETPVFHEIAKKHKRKG---YFLYEELKK 341 (382)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhh------hHHHhCCCCc------ccceeeecCchHHHHHHhCcCCc---eeeHHHHHh
Confidence 2334555677899999999983 5777765432 234555654421 1111 137888999
Q ss_pred CCCe-eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 424 SGIQ-LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 424 ~gI~-v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
+||. +++|. ..++.+|+- --+.|+|++++++++++++.
T Consensus 342 RgI~GI~~G~---------------------------------------Tk~~K~svy-Gl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 342 RGIHGIQPGQ---------------------------------------TKYFKLSVY-GLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cCccccccCc---------------------------------------eeEEEEEee-cCCHHHHHHHHHHHHHHHHh
Confidence 9887 44432 467888864 35899999999999998863
No 245
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=4.8e-18 Score=175.35 Aligned_cols=233 Identities=12% Similarity=0.051 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+.+++.+|++.|++.. ++++|+++|+.+++. + .++|++|+++...|++..... ..++..|++++.++..
T Consensus 52 pt~~~le~~la~l~g~~~~----~~~~sG~~ai~~~~~-l-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 124 (366)
T PRK08247 52 PTRGVLEQAIADLEGGDQG----FACSSGMAAIQLVMS-L-FRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA- 124 (366)
T ss_pred chHHHHHHHHHHHhCCCcE----EEEcCHHHHHHHHHH-H-hCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCC-
Confidence 4467889999999999754 556777889988764 4 478899999988888765543 3566789999998753
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|++.++ +++ +++|++|++++++||+|.+.++++|.++|++ +
T Consensus 125 -------------------d~~~l~--~~i------~~~tklv~le~P~NP~~~~~dl~~I~~la~~------------~ 165 (366)
T PRK08247 125 -------------------SLKAIE--QAI------TPNTKAIFIETPTNPLMQETDIAAIAKIAKK------------H 165 (366)
T ss_pred -------------------CHHHHH--Hhc------ccCceEEEEECCCCCCCcHHHHHHHHHHHHH------------c
Confidence 356777 444 4678999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhhc
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++++|.+++.+.....+ ..++|+++.|++|+++++.+ .|+++.+ +++.+.+.....
T Consensus 166 g~~lIvD~t~~~~~~~~p~-~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~------------------ 226 (366)
T PRK08247 166 GLLLIVDNTFYTPVLQRPL-EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQN------------------ 226 (366)
T ss_pred CCEEEEECCCccccccCch-hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHH------------------
Confidence 9999999998655432222 34789999999999986644 4777765 445444332210
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCce
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (508)
......+....+.+..+++. +..+.++.++.++.+.+.|++. |++..+..++. +++
T Consensus 227 ------~~g~~~s~~~a~l~~~~l~t-----l~~r~~~~~~~a~~l~~~L~~~------p~v~~v~~P~~-------gg~ 282 (366)
T PRK08247 227 ------AAGAVLSPFDSWLLIRGMKT-----LALRMRQHEENAKAIAAFLNEQ------PGVTDVLYPGR-------GGM 282 (366)
T ss_pred ------hcCCCCChHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhC------CCeeEEecCCc-------CcE
Confidence 00112222222222223332 3455566788899999999887 36764333322 788
Q ss_pred EEEEee
Q 010538 400 VSFNLK 405 (508)
Q Consensus 400 v~~~~~ 405 (508)
++|.++
T Consensus 283 ~sf~~~ 288 (366)
T PRK08247 283 LSFRLQ 288 (366)
T ss_pred EEEEEC
Confidence 999875
No 246
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=7e-18 Score=175.48 Aligned_cols=315 Identities=10% Similarity=-0.022 Sum_probs=199.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~ 161 (508)
....+++++.++++.|.+ .+++++|+++|+.+++.++ .++|++||++...|+++.... ..+...|++++.++..
T Consensus 64 ~pt~~~Le~~lA~l~g~~----~~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~ 138 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGR----HALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL 138 (394)
T ss_pred CHHHHHHHHHHHHHhCCC----eEEEeccHHHHHHHHHHHH-hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC
Confidence 344678899999999964 6899999999999999998 789999999999998776544 3456789999988643
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
. .++++ +++ .++|++|++++++||+|.+.|+++|.++|++
T Consensus 139 ~--------------------~~~l~--~~i------~~~tklV~le~p~Np~~~~~di~~I~~ia~~------------ 178 (394)
T PRK07050 139 I--------------------GAGIA--DLI------QPNTRLIWLEAPGSVTMEVPDVPAITAAARA------------ 178 (394)
T ss_pred C--------------------HHHHH--Hhc------CCCCeEEEEECCCCCCccHhhHHHHHHHHHH------------
Confidence 1 23456 333 5689999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe-chhHhhhccccccCceEEecccchhhhhh
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
+|+++++|++++.|.. ....+.++|+++.|++|++++..+ .|+++.+ +++.++++....
T Consensus 179 ~gi~livD~a~a~~~~-~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~----------------- 240 (394)
T PRK07050 179 RGVVTAIDNTYSAGLA-FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARM----------------- 240 (394)
T ss_pred cCCEEEEECCcccccc-cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHH-----------------
Confidence 8999999999988754 223344789999999998875444 4666664 445444432210
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCC-------
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSE------- 390 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~------- 390 (508)
...++.+... ...+++-+. .+..+.++..+.+..+.+.|++.+ .+ +++-|.-..
T Consensus 241 -------~~G~~~~~~~---a~l~lr~l~--tl~~Rl~~~~~~a~~la~~L~~~p------~v~~v~~p~l~~~p~~~~~ 302 (394)
T PRK07050 241 -------RLGIGVSADD---CSLVLRGLP--SLQVRLAAHDRSALEVAEWLKARP------EIATVLHPALPDCPGHAFW 302 (394)
T ss_pred -------hcCCCCCHHH---HHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHhCC------CccEEECCCCCCCccHHHH
Confidence 1112222211 112222111 244456666777778888887763 33 233221000
Q ss_pred cc-cCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCC
Q 010538 391 VS-YHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHG 469 (508)
Q Consensus 391 ~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 469 (508)
.. -..-+++++|.+++.... -....+.+.|+..++.++-|...+.-.. ...++ + .|. +. .
T Consensus 303 ~~~~~~~g~~~s~~l~~~~~~-~~~~~~~~~l~~~~~~~s~G~~~sl~~~-----~~~~~----~--~~~---~~---~- 363 (394)
T PRK07050 303 MRDFTGAGGLFSVVFDERYSP-AQVDAFVEALELFAIGWSWGGACSLAMP-----YDVAS----M--RTA---KW---P- 363 (394)
T ss_pred HHhCCCCceEEEEEECCCCCH-HHHHHHHHcCCCCeeccccCCccceEee-----Ccccc----c--chh---hc---C-
Confidence 00 001367899998642111 1224566777777777777753332100 00000 0 010 00 0
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 470 KPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 470 ~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
..++.||+|++.-+-++=++.+.++|..
T Consensus 364 ~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 364 HRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred CCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 2358899999986655555555555543
No 247
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.81 E-value=2.3e-17 Score=177.59 Aligned_cols=393 Identities=13% Similarity=0.054 Sum_probs=246.2
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCC-CccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHH
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPH-SQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVG 120 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~ 120 (508)
.|+.+--+.+.+|.++..++.... |++ ..+..++.+..+.+++.+++++++|.+.. .-.||+|+|+|+..++
T Consensus 85 ry~ghm~~~~~~paila~~~a~~~-----N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~--~G~~TsGGT~ANl~aL 157 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAMLW-----NGNNVAYESSPATSQMEEEVGKEFATLMGYKNG--WGHIVADGSLANLEGL 157 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHHh-----CCCCCccccCchHHHHHHHHHHHHHHHhCCCCC--CeEEeCChHHHHHHHH
Confidence 688888777767766655544332 333 23445566778888999999999999876 6789999999986533
Q ss_pred hhcCC--------C-------------------------------------------CC------CeEEEecccccchHH
Q 010538 121 EAFPW--------S-------------------------------------------HQ------SSYMYTMENHNSVLG 143 (508)
Q Consensus 121 ~~l~~--------~-------------------------------------------~g------~~vl~~~~~h~s~~~ 143 (508)
..... + +| -+++++...|.|+..
T Consensus 158 ~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~K 237 (608)
T TIGR03811 158 WYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLK 237 (608)
T ss_pred HHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHH
Confidence 32110 0 00 157888888998887
Q ss_pred HHHHHHhcCC---eEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCH
Q 010538 144 IREYALSQGA---AAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNL 220 (508)
Q Consensus 144 ~~~~~~~~G~---~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i 220 (508)
....+ |+ .++.||++.++.+ |++.++ +.|++....+..+-.|+.+..++.+|.+.|+
T Consensus 238 Aa~il---GlG~~~vv~VpvD~~~rm---------------d~~~L~--~~I~~~~~~g~p~~~VVataGTT~~GaiDpl 297 (608)
T TIGR03811 238 AADII---GIGLDQVIPVPVDSNYRM---------------DINELE--KIIRKLAAEKTPILGVVGVVGSTEEGAVDGI 297 (608)
T ss_pred HHHHc---CCCcccEEEeecCCCCcC---------------CHHHHH--HHHHHHHhcCCCeEEEEEEcCCcCCcccCCH
Confidence 77765 65 5899999988887 688887 6664322233455678889999999999999
Q ss_pred HHHHHHHcCCccccccCCCCCCCe--EEEEeccccCCC-----------CCCC-----------C---------------
Q 010538 221 DLINIMKKNPERILEISPFSKGRW--MVLIDAAKGCVT-----------QPPD-----------L--------------- 261 (508)
Q Consensus 221 ~~i~~l~~~~~~~~~~~~~~~~g~--~vivD~a~~~g~-----------~~~d-----------~--------------- 261 (508)
++|.++|++ ++++|+ ++|||+|++... .|.+ +
T Consensus 298 ~eI~~l~~~---------~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l 368 (608)
T TIGR03811 298 DKIVALRNK---------LMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAY 368 (608)
T ss_pred HHHHHHHHH---------HHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHH
Confidence 999999953 123687 799999998632 1110 0
Q ss_pred CC-CCCcEEEEeccccccCCCcceEEEEechhHhhh----ccccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 262 SK-YPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLL----KNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 262 ~~-~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
+. ..+|.++.++|||+..|.++|++++++..+... .+++...+. .. +..-... ..-|+.+....
T Consensus 369 ~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~--------~~--p~~~g~~-~legSR~ga~A 437 (608)
T TIGR03811 369 KAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGA--------DI--PALLGAY-ILEGSKAGATA 437 (608)
T ss_pred hcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccc--------cC--ccccccc-ceecCCccHHH
Confidence 01 268999999999877799999999998753221 111111000 00 0000011 12244444557
Q ss_pred HHHHHHHHHH--HhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEE--ecCCCCCcccCCCCceEEEEeeCCCCCcc
Q 010538 337 ASIRHGFNLI--NSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTI--YGTYTSEVSYHDTGSMVSFNLKRPDGSWF 412 (508)
Q Consensus 337 ~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 412 (508)
++++.+++.+ ...|+.++..+..++++++.+.|.+....-..+.+++ +.++. .++|+|++.......+
T Consensus 438 lklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pd--------lniV~Fr~~~~g~~~l 509 (608)
T TIGR03811 438 ASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPD--------FNMVDYVFNEKGNDDL 509 (608)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCC--------cceEEEEEecCCCccH
Confidence 7788888887 6678999999999999999999987410000134665 44444 7999999853322111
Q ss_pred -CHH----HHHHHHh-------hCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC
Q 010538 413 -GYR----EVEKLAS-------LSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG 480 (508)
Q Consensus 413 -~~~----~l~~~L~-------~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 480 (508)
... .+.+.+. ..-..++...++...+ |..+-.+.+-+|..-.-|.+ ..+-..+|-++.
T Consensus 510 ~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~y-----g~~~~~~~~~~~~~~~~~~~-----~~~~~~lr~~~m 579 (608)
T TIGR03811 510 VKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDY-----GDSPFAFVNSLGFSDEEWQR-----AGKVTILRASVM 579 (608)
T ss_pred HHHHHHHHHHHHhhccccCCCCCcceEeeecccccchh-----hhhHHHHHHHcCCChhhhcc-----CCceEEEEEEec
Confidence 112 2333333 1223333333333332 22333445555554222222 123467999987
Q ss_pred --CCCCHHHHHHHHHhhhhhh
Q 010538 481 --YMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 481 --~~~t~eev~~l~~~~~~~~ 499 (508)
+.++.+-++.++..+++.+
T Consensus 580 ~p~~~~~~~~~~~~~~~~~~~ 600 (608)
T TIGR03811 580 TPYMNDKENFDEYAPKIKAAM 600 (608)
T ss_pred CcccCChhhHHHHHHHHHHHH
Confidence 5577788888888877643
No 248
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.80 E-value=3.6e-18 Score=167.61 Aligned_cols=355 Identities=12% Similarity=0.081 Sum_probs=241.6
Q ss_pred chHHHHHHhhccCC--------CCCeeeeC--CCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHH
Q 010538 25 SIDQIRATEFKRLE--------NGTVYLDH--AGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVL 94 (508)
Q Consensus 25 ~~~~~r~~~f~~~~--------~~~iyld~--~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la 94 (508)
.+.++.+ +||.-. +=.+|..| -+.+. +|.+.+++.+.+.+...+.-+..+..| ......++++.+|
T Consensus 151 ~vNRlA~-~fP~A~~~se~t~k~VtVWCSNDYLgms~-Hp~V~~A~~~tl~~hG~GAGGTRNIsG--~s~~hv~LE~eLA 226 (570)
T KOG1360|consen 151 NVNRLAK-EFPLAHRYSEATEKKVTVWCSNDYLGMSR-HPEVLDAMHDTLDRHGAGAGGTRNISG--HSKHHVRLEAELA 226 (570)
T ss_pred HHhHhhh-hccchhhccccccCceEEEecCccccccC-ChHHHHHHHHHHHHcCCCcCCccccCC--CCchhhhHHHHHH
Confidence 6777877 999752 11355544 44443 888999987766443222222233333 4556677889999
Q ss_pred HHcCCCCCCceEEEcCChHHHHHHHHhhc-CCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccc
Q 010538 95 DYFNASMKDYKCIFTSGATAALKLVGEAF-PWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 95 ~~~~~~~~~~~i~~t~g~t~al~~~~~~l-~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~ 173 (508)
++-+-+.. ++|+++.- |+...+..| ..-+|.+|...+.+|.|.+..++-. ++.=.....+
T Consensus 227 ~LHqK~aA---LlFsSCfV-ANDstLftLak~lpgcei~SD~gNHASMI~GIrns---~v~K~IFrHN------------ 287 (570)
T KOG1360|consen 227 DLHQKEAA---LLFSSCFV-ANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNS---RVPKHIFRHN------------ 287 (570)
T ss_pred HHhcCcce---eeeeeeee-ccchHHHHHHHHCCCcEEeccccchHHHHHHhhhc---CCcceeeccC------------
Confidence 99998876 77776654 444333333 2346899999999998876655432 3221111222
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG 253 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~ 253 (508)
|++.++ +.|.+ .....+|+|++..+++++|.+.|+++|++++|+ +|++.++|++|+
T Consensus 288 --------D~~hL~--~lL~~--~~~svPKivAFEtVhSM~GavcpleelcDvah~------------yGAiTFlDEVHA 343 (570)
T KOG1360|consen 288 --------DLDHLE--QLLQS--SPKSVPKIVAFETVHSMDGAVCPLEELCDVAHK------------YGAITFLDEVHA 343 (570)
T ss_pred --------CHHHHH--HHHHh--CCCCCCceEEEeeeeccCCCcCCHHHHHHHHHH------------hCceeeeehhhh
Confidence 233334 33322 123457999999999999999999999999998 999999999988
Q ss_pred CCCCC--------CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccc
Q 010538 254 CVTQP--------PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEEL 325 (508)
Q Consensus 254 ~g~~~--------~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (508)
+|..- -|---..+|++.+++-|.|| --| |++-....+++.++.+..|.
T Consensus 344 VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafG-cVG-GYIAat~~LvDmiRSyAaGF---------------------- 399 (570)
T KOG1360|consen 344 VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFG-CVG-GYIAATRKLVDMIRSYAAGF---------------------- 399 (570)
T ss_pred hccccCCCCCccccCCcchhhhhcccchhhhcc-ccc-ceehhhhhHHHHHHHhcCce----------------------
Confidence 64321 11111258999999999999 445 88888888888766553221
Q ss_pred ccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEee
Q 010538 326 FEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLK 405 (508)
Q Consensus 326 ~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 405 (508)
....+.+...+++.-.+++++...--..+++..++..+|+++.|.++ |+.++..+ ++|+.+++.
T Consensus 400 IFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-------GiPVi~~p---------SHIiPv~vg 463 (570)
T KOG1360|consen 400 IFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-------GIPVIPNP---------SHIIPVRVG 463 (570)
T ss_pred EEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-------CCcccCCC---------cceeeeecc
Confidence 11234556667777788888765433566677788899999999887 77777544 799999987
Q ss_pred CCCCCccCHHHHHH-HHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 406 RPDGSWFGYREVEK-LASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 406 ~~~~~~~~~~~l~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
+.... ..+.. ++.++||.|....+.+.+. ....+||++...+|
T Consensus 464 da~l~----~~~sd~Li~~h~iYvQaINyPTV~r--------------------------------G~E~LRiaPTP~HT 507 (570)
T KOG1360|consen 464 DAALA----KQASDILISKHNIYVQAINYPTVAR--------------------------------GTERLRIAPTPHHT 507 (570)
T ss_pred CHHHH----HHHHHHHHHhcCeEEEeccCCcccc--------------------------------cceeeecCCCCCCC
Confidence 64321 12343 5578899999887666543 25679999999999
Q ss_pred HHHHHHHHHhhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~~ 502 (508)
.+-++.|++.+.+..+.+
T Consensus 508 ~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 508 PQMMNILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999998876544
No 249
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=5.7e-18 Score=177.56 Aligned_cols=160 Identities=10% Similarity=0.028 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~ 162 (508)
...+++++.+|++.|.+. .++++++++|+.+++.++ .++|++|+++...|++..... ..+...|+++..++..
T Consensus 58 pt~~~Le~~lA~l~g~~~----~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~- 131 (425)
T PRK06084 58 PTNDVLEQRVAALEGGVG----ALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHD- 131 (425)
T ss_pred chHHHHHHHHHHHhCCCc----eeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCC-
Confidence 346678999999999753 456778889999999988 678999999987777544333 3333457777766542
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ .++|++|++++++||+|.+.|+++|.++|++ +
T Consensus 132 -------------------d~e~le--~ai------~~~tklV~lesp~NPtG~v~dl~~I~~la~~------------~ 172 (425)
T PRK06084 132 -------------------DIAALE--ALI------DERTKAVFCESIGNPAGNIIDIQALADAAHR------------H 172 (425)
T ss_pred -------------------CHHHHH--HHh------ccCCcEEEEeCCCCCCCeecCHHHHHHHHHH------------c
Confidence 366777 444 4578999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-ceEEEEe
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-LGALIMR 289 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~G~l~~~ 289 (508)
|+++|+|++++.+...-.+ +.++|+++.|++|+++++.. +|.+++.
T Consensus 173 ~i~vVvD~a~a~~~~~~p~-~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 173 GVPLIVDNTVATPVLCRPF-EHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred CCEEEEECCCcccccCChh-hcCCCEEEECchhcccccccceeEEEEe
Confidence 9999999999877553333 56899999999999996643 5666664
No 250
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.80 E-value=2.3e-17 Score=162.20 Aligned_cols=346 Identities=16% Similarity=0.113 Sum_probs=230.3
Q ss_pred CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC---ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc-CChHHH
Q 010538 40 GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS---QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT-SGATAA 115 (508)
Q Consensus 40 ~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t-~g~t~a 115 (508)
....|..+... +|+.|++.+.+.+. ++.+.-.+ ....+........++++.+.+++++|.+ |+|.|. .|+|..
T Consensus 5 ~~~nFsaGPa~-lp~~vL~~a~~e~~-~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~-Y~VlflqGGat~q 81 (365)
T COG1932 5 RVYNFSAGPAA-LPPEVLQQAQKELL-DWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDD-YKVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCCccc-CCHHHHHHHHHHHh-hhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCccHHH
Confidence 34455544444 58888887766553 33321111 2223455678899999999999999865 899888 567777
Q ss_pred HHHHHhhcCCCCCC-eEEEecccccchHHHHHHHHhcCCeEEEEcc--C--CccCccccccccccccccccchhhhhcCC
Q 010538 116 LKLVGEAFPWSHQS-SYMYTMENHNSVLGIREYALSQGAAAFAIDV--E--EAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 116 l~~~~~~l~~~~g~-~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~--~--~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
+.++...|....+. .|.+...+..++- .++..+..+..+.. . +.+.+. +++...
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~~a~~----eA~~~~~~~~~~~~~~~~~~~~~iP--------------~~~~~~--- 140 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSEFAIK----EAKKVGKQPKLIDARIEEAGYGSIP--------------DLSKWD--- 140 (365)
T ss_pred HHHHHHhhhcccCceeEeeeehhHhHHH----HHHHhcccccccccceeccCccCCC--------------Chhhcc---
Confidence 88888888433332 3555544443332 23333422222211 1 122331 222222
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHH-HHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEE
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLD-LINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFV 269 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~-~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~ 269 (508)
..++...|.+++..+.+|+.+|.. .+. .+.++++|+++....+++|+++ .|++
T Consensus 141 -------~~~~~ayv~~~~NeTi~Gv~v~~~p~~~-----------------~~~~~v~D~SS~ilsr~iDvsk--~dvi 194 (365)
T COG1932 141 -------FSDNDAYVHFCWNETISGVEVPELPDIG-----------------SDGLLVADASSAILSRPIDVSK--YDVI 194 (365)
T ss_pred -------cCCCccEEEEecCCcccceEccCCCCCC-----------------CCceEEEecccHHhcCCCChhH--cceE
Confidence 223357789999999999998831 111 2389999999999999999997 7899
Q ss_pred EEeccccccCCCcceEEEEechhHhhhccc-cccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 270 VMSFYKIFGYPTGLGALIMRNDAAKLLKNT-YFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 270 ~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
+++.+|.+| |.|++++++++++++++.+. ++.. .++. .........-||++..++.+..+++|+.+
T Consensus 195 yagaQKnlG-paGltvvIvr~~~l~r~~~~~~P~i---------f~y~---~~~~~~s~yNTPptfa~y~~~lv~~Wlk~ 261 (365)
T COG1932 195 YAGAQKNLG-PAGLTVVIVRPDLLERAESYTLPSI---------FDYL---THADNGSMYNTPPTFAWYLLGLVFKWLKS 261 (365)
T ss_pred EEehhhccC-ccceEEEEEcHHHHhcccccCCchH---------hhch---hhhccCCccCCcHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999999999887654 2211 1111 11123334467777777788888999887
Q ss_pred c-ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCe
Q 010538 349 L-TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQ 427 (508)
Q Consensus 349 ~-g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~ 427 (508)
. |++.+.+|..+.++.|.+.+.+.. -++-.-.+. .|+-..|+|.+.+.+ ++. .+.+.++++|..
T Consensus 262 ~GGl~~~~~rn~~ka~~LY~~id~s~------fy~~~v~~~-----~RS~mnV~f~~~~~~---ld~-~fv~eae~~gl~ 326 (365)
T COG1932 262 QGGLEALEARNQAKAQLLYDWIDKSD------FYRNLVAKA-----NRSRMNVTFTLVDAE---LDK-GFVAEAEAAGLI 326 (365)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCC------ccccccchh-----hccceeEEEEcCcHH---HHH-HHHHHHHHcCCc
Confidence 4 799999999999999999998863 122221223 344678888887432 333 366777788888
Q ss_pred eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 428 LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 428 v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
..-|+ +..|.+|+|+..-...|+|+.|++.|++|.+
T Consensus 327 ~lkGh-------------------------------------r~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 327 YLKGH-------------------------------------RSVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred eeccc-------------------------------------cCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 76652 1245699999999999999999999998865
No 251
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.80 E-value=2.6e-17 Score=171.79 Aligned_cols=323 Identities=12% Similarity=0.075 Sum_probs=205.9
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .|--+|.+++++.+.+. .. ....... ......++.++++++.+. + .+.|++++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~-~~-~~~~~~~-----~~~~~~~l~~~l~~~~~~--~--~~~~~~SG 106 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQAD-KV-TLTSRAF-----HSDQLGPWYEKVAKLTGK--D--MVLPMNTG 106 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHh-hc-ccccccc-----CCHHHHHHHHHHHhcCCC--C--eEEEcCCh
Confidence 6788999843 34458889888766543 21 1111111 123345567778887754 4 68999999
Q ss_pred HHHHHHHHhhcC-C--------CCCCeEEEecc-cccchHHHHHHHHhcCC---------eEEEEccCCccCcccccccc
Q 010538 113 TAALKLVGEAFP-W--------SHQSSYMYTME-NHNSVLGIREYALSQGA---------AAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 113 t~al~~~~~~l~-~--------~~g~~vl~~~~-~h~s~~~~~~~~~~~G~---------~v~~v~~~~~~~~~~l~~~~ 173 (508)
++|+..++.... + .+++.|++... -|......+......+. .+..+|.
T Consensus 107 seA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 173 (396)
T PRK04073 107 AEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY------------- 173 (396)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------------
Confidence 999988777542 1 23356666654 44444443332210000 0111221
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
.|+++++ +.+ .+++++|+++.++|++|.+.| +++|.++|++ +|+++|+|
T Consensus 174 -------~d~~~l~--~~i------~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~------------~g~lli~D 226 (396)
T PRK04073 174 -------GDLEALK--AAI------TPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKE------------ENVLFIAD 226 (396)
T ss_pred -------CCHHHHH--Hhc------ccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEe
Confidence 1466777 444 457899999999999999998 5678887876 99999999
Q ss_pred cccc-CCCC----CCCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQ----PPDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~----~~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
++|+ +|.. ..+......|++++ +|.+|++. -+|++++++++.+.+.+...+
T Consensus 227 Ev~~g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~--------------------- 283 (396)
T PRK04073 227 EIQTGLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVAANRDILGVFTPGSHG--------------------- 283 (396)
T ss_pred cchhCCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEEEcHHHHhhhcCCCCC---------------------
Confidence 9987 3321 12333345787775 59888441 289999999887665432110
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 324 ELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 324 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
.. .+.+....++..++++.+.+. .+.++..+++++|.+.|+++.. +.+..+.+ .+.++.+.
T Consensus 284 --~t-~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~----~~i~~~~~---------~g~~~~~~ 344 (396)
T PRK04073 284 --ST-FGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDN----PMIKEVRG---------RGLFIGVE 344 (396)
T ss_pred --CC-CCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcC----Ccccceec---------ceEEEEEE
Confidence 01 112445566666788876553 4567788899999999987621 12221111 26777777
Q ss_pred eeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC
Q 010538 404 LKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS 483 (508)
Q Consensus 404 ~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 483 (508)
++.. ...+.+.|.++||.+.+. .+++||+++++.+
T Consensus 345 ~~~~------~~~~~~~l~~~Gv~~~~~---------------------------------------~~~~iRi~p~l~~ 379 (396)
T PRK04073 345 LNEP------ARPYCEALKEEGLLCKET---------------------------------------HETVIRFAPPLVI 379 (396)
T ss_pred ecch------HHHHHHHHHHCCeEEecC---------------------------------------CCCEEEEECCccc
Confidence 7531 234778888899998641 1468999999999
Q ss_pred CHHHHHHHHHhhhhhh
Q 010538 484 TFEDAKVNRCSSFDFV 499 (508)
Q Consensus 484 t~eev~~l~~~~~~~~ 499 (508)
|.||++++++.|++++
T Consensus 380 t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 380 TKEELDWAFEKIKAVL 395 (396)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 252
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.1e-17 Score=172.92 Aligned_cols=313 Identities=11% Similarity=-0.032 Sum_probs=192.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~ 161 (508)
....+.+++.++.+-+.+.. ++++++++|++.++.++ +++|++||++...|+++.... ..+++.|+++..++.+
T Consensus 63 nPt~~~Le~~la~le~~~~~----v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~ 137 (395)
T PRK05967 63 TPTTDALCKAIDALEGSAGT----ILVPSGLAAVTVPFLGF-LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE 137 (395)
T ss_pred ChHHHHHHHHHHHHhCCCCE----EEECcHHHHHHHHHHHh-cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC
Confidence 34466778888888776533 45555789999999998 799999999998888776554 4667889999998643
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
. .+.++ +++ .++|++|++++++||++.+.|+++|.++||+
T Consensus 138 ~--------------------~e~l~--~al------~~~TklV~lesPsNP~l~v~dl~~I~~la~~------------ 177 (395)
T PRK05967 138 I--------------------GAGIA--KLM------RPNTKVVHTEAPGSNTFEMQDIPAIAEAAHR------------ 177 (395)
T ss_pred C--------------------HHHHH--Hhc------CcCceEEEEECCCCCCCcHHHHHHHHHHHHH------------
Confidence 1 34456 444 5679999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhc
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~ 319 (508)
+|+++++|++++.+.. ....++|+|+++.|.+|+++|-.+ .|+++.+++..+++....
T Consensus 178 ~g~~vvVD~t~a~p~~-~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~------------------- 237 (395)
T PRK05967 178 HGAIVMMDNTWATPLY-FRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAH------------------- 237 (395)
T ss_pred hCCEEEEECCccCcee-cChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHH-------------------
Confidence 9999999999976521 233346899999999998883322 576666665544433110
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCccc-----
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSY----- 393 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~----- 393 (508)
.....+.+....+.+...++. +..+.++..+.+..+.+.|++.+ .+ +++-|.-. ..+
T Consensus 238 -----~~~G~~~~p~da~l~~rgl~T-----l~lR~~~~~~na~~lA~~L~~hp------~v~~V~yPgl~-s~p~~~~~ 300 (395)
T PRK05967 238 -----GTLGLCAGPDDTYQILRGLRT-----MGIRLEHHRKSALEIARWLEGRP------DVARVLHPALP-SFPGHEIW 300 (395)
T ss_pred -----HHcCCCCCHHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCC------CCcEEECCCCC-CCccHHHH
Confidence 111223333333333333333 45555666777777777777763 34 33333210 000
Q ss_pred ----CCCCceEEEEeeCCC--CCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCcccc
Q 010538 394 ----HDTGSMVSFNLKRPD--GSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDII 467 (508)
Q Consensus 394 ----~~~~~~v~~~~~~~~--~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 467 (508)
..-+++++|.+++.. +.+ ...++...|+-..+.++-|...+.- .+ ....+..+.+ .
T Consensus 301 ~~~~~g~gg~~sf~l~~~~~~~~~-~~~~f~~~l~l~~~~~slG~~~sLi-~~--~~~~~~~~~~-~------------- 362 (395)
T PRK05967 301 KRDFSGASGIFSFVLAAGPEKGKA-KAHAFLDALEIFGLGYSWGGYESLA-LH--VKLGDRTVAK-A------------- 362 (395)
T ss_pred HHhCCCCceEEEEEEcCCCcccHH-HHHHHHHhCCcceEccCCCCcceee-ee--CCCChhHhhh-c-------------
Confidence 012689999997420 111 1123444444334444444322111 00 0011111111 1
Q ss_pred CCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 468 HGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 468 ~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
+..++.||+|++.-+.++=++.+.++|.
T Consensus 363 -~~~~~liRlSvGlEd~~dLi~Dl~~Al~ 390 (395)
T PRK05967 363 -PYAGPVIRLQIGLEDVPDLKADLERGFA 390 (395)
T ss_pred -cCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 1235789999998766665665555554
No 253
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.80 E-value=6.3e-17 Score=167.77 Aligned_cols=328 Identities=12% Similarity=0.073 Sum_probs=205.9
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+..+|.+.+++.+.+. .. ......+ ......++.+.+++++|.+ ++++++|+
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~-~~-~~~~~~~-----~~~~~~~l~~~la~~~g~~----~~~~~~sg 93 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLE-KL-VHVSNLY-----YTEPQEELAEKLVEHSGAD----RVFFCNSG 93 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHh-hc-ccccccc-----CCHHHHHHHHHHHhhCCCC----EEEEeCCc
Confidence 5566777754 33445778777765443 21 1111111 2345778899999999864 68999999
Q ss_pred HHHHHHHHhhcC--CC----CCCeEEEecccccchHHHHHHHHhcCCeEE----EEccCCccCccccccccccccccccc
Q 010538 113 TAALKLVGEAFP--WS----HQSSYMYTMENHNSVLGIREYALSQGAAAF----AIDVEEAVDNDGLSESLVTSTKISLL 182 (508)
Q Consensus 113 t~al~~~~~~l~--~~----~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~----~v~~~~~~~~~~l~~~~~~~~~~~~d 182 (508)
++|+.+++..+. .. ++++|++....|..+....... +.... ..+...+..... -.|
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----------~~d 159 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA---TGQPKYQKGFEPLVPGFSYAP-----------YND 159 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh---cCChhhhccCCCCCCCceeeC-----------CCC
Confidence 999998887552 11 3688888775554443332222 21111 112211110000 004
Q ss_pred hhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccc-cC---HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC
Q 010538 183 PIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSR-FN---LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ 257 (508)
Q Consensus 183 ~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~-~~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~ 257 (508)
++.++ +.+ ++++++|+++++++++|.. .+ +++|.++|++ +|+++++|++++ ++..
T Consensus 160 ~~~l~--~~~------~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~------------~~~~~i~De~~~~~~~~ 219 (379)
T TIGR00707 160 IESLK--KAI------DDETAAVIVEPIQGEGGVNPASAEFLKALREICKD------------KDALLIFDEVQTGIGRT 219 (379)
T ss_pred HHHHH--HHh------hhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHH------------cCCEEEEeccccCCCcc
Confidence 67777 444 3568999999888888865 44 5566666665 999999999987 4332
Q ss_pred ----CCCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCC
Q 010538 258 ----PPDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTAS 332 (508)
Q Consensus 258 ----~~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 332 (508)
+.+......|++ +++|.++ |+ .+|+++++++.++.+.+...+ . ..+.+
T Consensus 220 g~~~~~~~~~~~~d~~--t~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~-----------------------~-~~~~~ 272 (379)
T TIGR00707 220 GKFFAYEHYGIEPDII--TLAKGLG-GGVPIGATLAKEEVAEAFTPGDHG-----------------------S-TFGGN 272 (379)
T ss_pred chhhhHHhcCCCCCEE--EEccccc-CCcccEEEEEcHHHHhhhcCCCCC-----------------------C-CCCCC
Confidence 112222345665 5679998 52 389999998887766543111 0 11235
Q ss_pred hhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc
Q 010538 333 FLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF 412 (508)
Q Consensus 333 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 412 (508)
...++++.++++.+.. ..+.++++++++++++.|+++. ........ ...+.++++.++..
T Consensus 273 ~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~-----~~~g~~~~~~~~~~----- 332 (379)
T TIGR00707 273 PLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELG-------KNYPNKEV-----RGKGLMLGIELEAP----- 332 (379)
T ss_pred HHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHH-------hhCCCCcc-----ccCceEEEEEecCc-----
Confidence 5667777778887653 3567888889999998887652 11110110 01267888887542
Q ss_pred CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHH
Q 010538 413 GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNR 492 (508)
Q Consensus 413 ~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~ 492 (508)
...+.+.|.++||.++++. .+++|++++..+|.+++++++
T Consensus 333 -~~~~~~~l~~~Gv~v~~~~---------------------------------------~~~lRi~~~~~~t~~~i~~~~ 372 (379)
T TIGR00707 333 -CKDIVKKALEKGLLVNCAG---------------------------------------PKVLRFLPPLIITKEEIDEAV 372 (379)
T ss_pred -HHHHHHHHHHCCcEEeeCC---------------------------------------CCEEEEECCCcCCHHHHHHHH
Confidence 2357888999999998631 368999999999999999999
Q ss_pred Hhhhhh
Q 010538 493 CSSFDF 498 (508)
Q Consensus 493 ~~~~~~ 498 (508)
++|++.
T Consensus 373 ~~l~~~ 378 (379)
T TIGR00707 373 SALEEA 378 (379)
T ss_pred HHHHHh
Confidence 998764
No 254
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=1.1e-17 Score=171.98 Aligned_cols=232 Identities=13% Similarity=0.040 Sum_probs=158.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhc-CCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQ-GAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~-G~~v~~v~~~ 161 (508)
....+++++++|++.+.+ .++.++|+++|+.+++.. +++|++||++...|.....+....... +.++...
T Consensus 53 ~p~~~~le~~lA~leg~~----~~v~~~sG~aAi~~~l~~--l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--- 123 (364)
T PRK07269 53 NPTRAKLEETLAAIESAD----YALATSSGMSAIVLAFSV--FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--- 123 (364)
T ss_pred CccHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHH--hCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec---
Confidence 344677899999999864 578899999999988854 478999999987776655554433222 2222211
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
. |+++++ +++ +++|++|++++++||+|.+.|+++|.++|++
T Consensus 124 ----~---------------d~~~l~--~~i------~~~TklV~lesP~NPtg~~~di~~I~~la~~------------ 164 (364)
T PRK07269 124 ----N---------------TEEELI--AAI------EEDTDIVYIETPTNPLMVEFDIEKVAKLAHA------------ 164 (364)
T ss_pred ----C---------------CHHHHH--Hhc------CcCceEEEEECCCCCCCeeeCHHHHHHHHHH------------
Confidence 1 466777 444 5789999999999999999999999999998
Q ss_pred CCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec-hhHhhhccccccCceEEecccchhhhhh
Q 010538 242 GRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN-DAAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 242 ~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
+|+++++|.+++.+...-+ ...++|+++.|++|+++++.. .|+++.++ ++.++++...
T Consensus 165 ~gi~vvvD~t~~~~~~~~p-l~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~------------------ 225 (364)
T PRK07269 165 KGAKVIVDNTFYSPIYQRP-IELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL------------------ 225 (364)
T ss_pred cCCEEEEECCCcccccCCc-hhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH------------------
Confidence 8999999999766543222 245899999999999986654 47667654 4444333110
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcccCCCC
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSYHDTG 397 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ 397 (508)
.......+....+-+...++ .++.+.++..+++.++.+.|++.+ .+ +++-|.. +
T Consensus 226 ------~~~G~~~s~~~a~l~~~~L~-----tL~~r~~~~~~na~~~a~~L~~~p------~v~~v~ypg~--------g 280 (364)
T PRK07269 226 ------NTTGAVLSPFDSYLLMRGLK-----TLSLRMERSTANAQEVVAFLKKSP------AVKEVLYTGK--------G 280 (364)
T ss_pred ------HHhCCCCCHHHHHHHHcCCC-----cHHHHHHHHHHHHHHHHHHHHhCC------CccEEeCCCc--------C
Confidence 00111222222222222222 357777888899999999998763 45 3443432 8
Q ss_pred ceEEEEeeC
Q 010538 398 SMVSFNLKR 406 (508)
Q Consensus 398 ~~v~~~~~~ 406 (508)
++++|.+.+
T Consensus 281 g~~sf~~~~ 289 (364)
T PRK07269 281 GMISFKVAD 289 (364)
T ss_pred cEEEEEECC
Confidence 999999853
No 255
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.80 E-value=2.1e-17 Score=173.42 Aligned_cols=161 Identities=11% Similarity=0.059 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~~ 162 (508)
...+++++.+|++.|.+ ..++++|++.|+..++.++ .++|++|+++...|++.... ...++..|++++.++.+
T Consensus 57 p~~~~le~~lA~l~g~~----~~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~- 130 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGV----AALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD- 130 (418)
T ss_pred hhHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-
Confidence 34678899999999974 4688899999999999887 67899999998887765443 44567789999998753
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
|+++++ +++ .+++++|++++++||+|.+.|+++|.++|++ +
T Consensus 131 -------------------d~~~l~--~~l------~~~t~~V~le~p~NPtg~v~dl~~I~~la~~------------~ 171 (418)
T TIGR01326 131 -------------------DPEEFE--KAI------DENTKAVFAETIGNPAINVPDIEAIAEVAHA------------H 171 (418)
T ss_pred -------------------CHHHHH--Hhc------CcCCeEEEEECCCCCCCeecCHHHHHHHHHH------------c
Confidence 256677 554 4578999999999999999999999999998 8
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEech
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRND 291 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~ 291 (508)
|+++++|++++.+.....+ ..++|+++.|++|+++ +.| +|+++++++
T Consensus 172 ~i~livD~t~~~~~~~~~l-~~g~Divv~S~sK~l~-g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 172 GVPLIVDNTFATPYLCRPI-DHGADIVVHSATKYIG-GHGTAIGGVIVDGG 220 (418)
T ss_pred CCEEEEECCCchhhcCCch-hcCCeEEEECcccccc-CCccceEEEEEecc
Confidence 9999999999876432222 4579999999999999 445 888888653
No 256
>PRK07049 methionine gamma-lyase; Validated
Probab=99.80 E-value=1.8e-17 Score=173.92 Aligned_cols=224 Identities=12% Similarity=0.019 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~~~~~ 164 (508)
...+++.+|++.|.+ ++++++|++.|+.+++.++ .++|+.|+++...|+.+.... ..++..|++++.++.. .
T Consensus 85 ~~~Le~~lA~leg~~----~~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~--~ 157 (427)
T PRK07049 85 SEIVEDRLAVYEGAE----SAALFSSGMSAIATTLLAF-VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG--L 157 (427)
T ss_pred HHHHHHHHHHHhCCC----cEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC--C
Confidence 567889999999865 3677778888999999888 688999999988888776653 3456679987666522 1
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC-CC
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK-GR 243 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~-~g 243 (508)
|.++++ +++.+ ....++|++|++++++||||.++|+++|.++++.+ -+++ ++
T Consensus 158 -----------------d~~~l~--~~l~~-~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~-------~~~~~~~ 210 (427)
T PRK07049 158 -----------------SEAAIG--AAAEA-AAAKGRVSLILIETPANPTNSLVDVAAVRRVADAI-------EARQGHR 210 (427)
T ss_pred -----------------CHHHHH--HHHHh-hccCCCceEEEEECCCCCCCcccCHHHHHHHHHHh-------hhcccCC
Confidence 123333 22211 11135789999999999999999999999999840 0111 68
Q ss_pred eEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccC
Q 010538 244 WMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQG 321 (508)
Q Consensus 244 ~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (508)
+++++|.++........+ ..++|+++.|++|.+++..| +|+++.++++++.+.....
T Consensus 211 ~~vvvDety~~~~~~~pl-~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~-------------------- 269 (427)
T PRK07049 211 PIIACDNTLLGPVFQKPL-EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRS-------------------- 269 (427)
T ss_pred CEEEEECCccccccCCcc-ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHH--------------------
Confidence 999999996543321222 34689999999999986556 7998888877665543211
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 322 VEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 322 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
...++.+....+.+..+++. +..+.++..+.++.+.+.|++.+
T Consensus 270 ----~~g~~ls~~~a~l~~r~L~t-----l~~R~~~~~~~a~~la~~L~~~p 312 (427)
T PRK07049 270 ----AIGTQLDPHSCWMLGRSLET-----LVLRMERANRNARAVAEFLRDHP 312 (427)
T ss_pred ----hcCCCCCHHHHHHHHcCCCh-----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 11223343434444334432 45555666888889999998874
No 257
>PLN02368 alanine transaminase
Probab=99.79 E-value=1.2e-17 Score=174.26 Aligned_cols=249 Identities=12% Similarity=0.021 Sum_probs=166.8
Q ss_pred HHHHHHHHHHc----C--CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 87 RAAREQVLDYF----N--ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 87 ~~~r~~la~~~----~--~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
..+|+.+|+++ | ++++ +|++|+|+++++.+++.++...+|+.|+++...|+.+..... ..|.+++.+|+
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~---~~g~~~v~v~~ 184 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATIS---LLGGTLVPYYL 184 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChh--hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHH---HcCCEEEEEec
Confidence 34555555554 6 5677 899999999999999998843689999999977777765544 45899999998
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+.+... .+|+++++ +++.+......+|+++++++++||||.+++.+++.++++ +|+
T Consensus 185 ~~~~~~-------------~~d~~~le--~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~---------~a~ 240 (407)
T PLN02368 185 EESENW-------------GLDVNNLR--QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILK---------FCY 240 (407)
T ss_pred ccccCC-------------CCCHHHHH--HHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHH---------HHH
Confidence 653211 12678887 555321111237899999999999999999998888877 566
Q ss_pred CCCeEEEEeccccC----CCCC-CCCC----C-------CCCcEEEEeccccc-cCCCc--ceEEEE---echhHhhhcc
Q 010538 241 KGRWMVLIDAAKGC----VTQP-PDLS----K-------YPVDFVVMSFYKIF-GYPTG--LGALIM---RNDAAKLLKN 298 (508)
Q Consensus 241 ~~g~~vivD~a~~~----g~~~-~d~~----~-------~~~D~~~~S~~K~~-g~P~G--~G~l~~---~~~~~~~l~~ 298 (508)
++|++||+|.++.. +..+ .++. . .+.-+++.|++|.| + .+| +||+++ ++++++.+..
T Consensus 241 ~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~-~~GlRiGy~i~~~~~~~li~~~~~ 319 (407)
T PLN02368 241 QERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWG-ECGQRGGYFEMTNIPPKTVEEIYK 319 (407)
T ss_pred HcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCccccc-CCccceEEEEEeCCCHHHHHHHHH
Confidence 79999999999864 2111 2211 1 11347788999987 6 557 899995 6677665544
Q ss_pred ccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH-------h--cChHHHHHHHHHHHHHHHHHH
Q 010538 299 TYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN-------S--LTVPAICRHIASLGMYVRKVL 369 (508)
Q Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~-------~--~g~~~i~~~~~~l~~~l~~~L 369 (508)
.. ... .+.+.....++.++++--. . ..++++.+.+++.++++.+.|
T Consensus 320 ~~------------------------~~~-~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L 374 (407)
T PLN02368 320 VA------------------------SIA-LSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGF 374 (407)
T ss_pred Hh------------------------ccc-CCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 31 011 1234444455554553100 0 012456788889999999999
Q ss_pred hcccCCCCCceEEEecCCCCCcccCCCCceEEEEe
Q 010538 370 LSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNL 404 (508)
Q Consensus 370 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (508)
+++ +|+.+..|.+ +.+++.++
T Consensus 375 ~~~------~g~~~~~P~G--------afy~~~~i 395 (407)
T PLN02368 375 NSC------KNVVCNFTEG--------AMYSFPQI 395 (407)
T ss_pred hCC------CCeEeCCCCe--------eeEeccCC
Confidence 988 4787766554 55666544
No 258
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.79 E-value=1.1e-16 Score=165.90 Aligned_cols=335 Identities=13% Similarity=0.085 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
...++..+.+++++|.+ ++++++|+|.|+.+++.++..++|++|+++...|+++...+ ...|++++.++++.+
T Consensus 31 ~~~~~~e~~la~~~g~~----~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~---~~~G~~~v~~d~d~~ 103 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA----KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF---VLRGAKIVFVDIRPD 103 (375)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHH---HHcCCEEEEEecCCC
Confidence 34677788899998884 68999999999999887776788999999998888775544 456999999998764
Q ss_pred c-CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 164 V-DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 164 ~-~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
. .+ |+++++ +++ +++|++|+++| ++|...++++|.++|++ +
T Consensus 104 ~~~~---------------d~~~le--~~i------~~~tk~i~~~~---~~G~~~~~~~i~~la~~------------~ 145 (375)
T PRK11706 104 TMNI---------------DETLIE--AAI------TPKTRAIVPVH---YAGVACEMDTIMALAKK------------H 145 (375)
T ss_pred cCCc---------------CHHHHH--Hhc------CCCCeEEEEeC---CCCCccCHHHHHHHHHH------------c
Confidence 3 34 688888 554 45789888764 58999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCC--CCcEEEEecc--ccccCCCcceEEEEe-chhHhhhccccccCceEEecccchhhhh
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKY--PVDFVVMSFY--KIFGYPTGLGALIMR-NDAAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~--~~D~~~~S~~--K~~g~P~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
|++||+|++|++|.. .+-... ..|+-++|+| |.++ ++.-|+++++ +++.++++.....|..... .+..
T Consensus 146 ~i~vIeD~a~a~g~~-~~~~~~g~~~~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~ 218 (375)
T PRK11706 146 NLFVVEDAAQGVMST-YKGRALGTIGHIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQ-----FFRG 218 (375)
T ss_pred CCEEEEECccccccc-cCCeeeecCcCEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcch-----hhcc
Confidence 999999999998863 222211 2478888988 9887 6322545554 4565555444322211000 0000
Q ss_pred hccCccccccCCCCCh-hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEec-CCCCCcccCC
Q 010538 318 RRQGVEELFEDGTASF-LSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYG-TYTSEVSYHD 395 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~-~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~-~~~~~~~~~~ 395 (508)
.... ......|+... ..+.+ ...+..+.. ++.+.++-+++.+++.+.|.+++. .+.+++.. +... ..
T Consensus 219 ~~~~-~~~~~~g~~~~~~~~~a-a~~~~ql~~--l~~~~~~R~~~~~~~~~~L~~~~~---~~~~~~~~~~~~~----~~ 287 (375)
T PRK11706 219 QVDK-YTWVDIGSSYLPSELQA-AYLWAQLEA--ADRINQRRLALWQRYYDALAPLAE---AGRIELPSIPDDC----KH 287 (375)
T ss_pred CCCc-ceeeecccccCcCHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCc---CCeeecCCCCCCC----ce
Confidence 0000 00011222211 11111 111122222 566777777888888888877621 00233321 1111 01
Q ss_pred CCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCC-ccCCCccccCCCCCce
Q 010538 396 TGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGH-VCWDDNDIIHGKPTGA 474 (508)
Q Consensus 396 ~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~ 474 (508)
..+++++.+++. .+..++.+.|.++||.++....+... ++. ....+..+ .|-.. .......
T Consensus 288 ~~~~~~~~~~~~----~~r~~l~~~L~~~gI~~~~~~~p~~~--~~~--------~~~~~~~~~~~p~a----~~~~~~~ 349 (375)
T PRK11706 288 NAHMFYIKLRDL----EDRSALINFLKEAGIMAVFHYIPLHS--SPA--------GERFGRFHGEDRYT----TKESERL 349 (375)
T ss_pred eeEEEEEEECCc----CCHHHHHHHHHHCCCCccccCCccCc--chh--------hHhcCCCCCCChHH----HHHHhCc
Confidence 134555666432 23456899999999998754321110 000 00000000 00000 0113567
Q ss_pred EEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
+-+-++..-|.+|++++++.+++++
T Consensus 350 l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 350 LRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred EeccCCCCCCHHHHHHHHHHHHHHh
Confidence 8888998899999999999998764
No 259
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.79 E-value=5.5e-18 Score=167.34 Aligned_cols=313 Identities=15% Similarity=0.142 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHcC--------CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEE
Q 010538 85 IVRAAREQVLDYFN--------ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAF 156 (508)
Q Consensus 85 ~~~~~r~~la~~~~--------~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~ 156 (508)
.....|+++|+++. .+|+ .+++++|+|.|++++.-.| ..||+..+++..-||++..-++ -+.|++++
T Consensus 122 Gl~~frqa~A~Fm~~~r~~~v~fdP~--~~Vv~~G~T~ane~l~fcL-adpgdafLvPtPyY~gfdrdl~--~rTgveiv 196 (471)
T KOG0256|consen 122 GLPSFRQAVAEFMERARGNRVKFDPE--RVVVTNGATSANETLMFCL-ADPGDAFLVPTPYYPGFDRDLR--WRTGVEIV 196 (471)
T ss_pred CchHHHHHHHHHHHHHhCCCCccCcc--ceEEecccchhhHHHHHHh-cCCCceeeecCCCCCcccccce--eccCceEE
Confidence 34567777777754 4788 8999999999999999998 6899999999988887754333 24689998
Q ss_pred EEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 157 AIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 157 ~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
.|........ +.+++++| +++++....+.+++-|.+++++||.|++++.+++..++.
T Consensus 197 pv~c~Ss~~f-------------~itv~alE--~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~-------- 253 (471)
T KOG0256|consen 197 PVHCSSSNGF-------------QITVEALE--AALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLN-------- 253 (471)
T ss_pred EEEeecCCCc-------------cccHHHHH--HHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHH--------
Confidence 8887653322 22688888 777655556778999999999999999999999999988
Q ss_pred CCCCCCCeEEEEeccccCCC---CC-CCC------C--CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhcccccc
Q 010538 237 SPFSKGRWMVLIDAAKGCVT---QP-PDL------S--KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFS 302 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~g~---~~-~d~------~--~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g 302 (508)
.+.++++.+|+|+.++.-. .. .++ . ..+.--++.|.+|=||-| | .|++|..++-.-......
T Consensus 254 -Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~Glp-GfRvGviYS~ne~VvsaA~km-- 329 (471)
T KOG0256|consen 254 -FASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLP-GFRVGVIYSNNEDVVSAATKM-- 329 (471)
T ss_pred -HHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCC-ceEEEEEEecChHHHHHHHHH--
Confidence 6777999999999986421 10 011 0 112235788999999945 7 899998776542221111
Q ss_pred CceEEecccchhhhhhccCccccccCCCCChh-HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE
Q 010538 303 GGTVAASIADIDFVKRRQGVEELFEDGTASFL-SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC 381 (508)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~-~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~ 381 (508)
.+|..-+.-+- .++.+- +=+++.+..+.+..+|++...+++.++|+++ |+
T Consensus 330 ---------------------ssf~~vSs~tQ~~la~LL-SD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-------gI 380 (471)
T KOG0256|consen 330 ---------------------SSFGLVSSQTQYLLASLL-SDEEFTREYLRENNKRLRIRHRYIVEGLKAL-------GI 380 (471)
T ss_pred ---------------------hhccCCcHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-------CC
Confidence 00100000011 122222 2244555567888999999999999999998 78
Q ss_pred EEecCCCCCcccCCCCceEEEEeeCC-CCCcc-CHHHHHHH-HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCC
Q 010538 382 TIYGTYTSEVSYHDTGSMVSFNLKRP-DGSWF-GYREVEKL-ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGH 458 (508)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~-~~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~ 458 (508)
..+.... +-++|+++... +...+ ....+.+. +.+-++.+++|.+|.
T Consensus 381 ~cl~s~A--------GlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~----------------------- 429 (471)
T KOG0256|consen 381 PCLKSNA--------GLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCH----------------------- 429 (471)
T ss_pred ceeecCC--------eeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcce-----------------------
Confidence 8876654 77888887642 11111 12234444 444599999998763
Q ss_pred ccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 459 VCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 459 ~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
|. .+||+|++|... .++.++-.++.+++++.
T Consensus 430 -C~---------EpGWFRvcFAn~-~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 430 -CH---------EPGWFRVCFANM-SEETLEVAMRRLKQFLD 460 (471)
T ss_pred -ec---------CCCeEEEEeccC-CHHHHHHHHHHHHHHHH
Confidence 22 279999999842 33444447888888875
No 260
>PRK08637 hypothetical protein; Provisional
Probab=99.79 E-value=1.4e-17 Score=173.35 Aligned_cols=308 Identities=13% Similarity=0.028 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHcC-----CCCCC-ceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEc
Q 010538 86 VRAAREQVLDYFN-----ASMKD-YKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAID 159 (508)
Q Consensus 86 ~~~~r~~la~~~~-----~~~~~-~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~ 159 (508)
...+|+.+++++. ..++. .+|++|+|+++++.+++.++ ..+|+.|++....|+.+..... ...|.+++.+|
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~--~~~g~~vv~v~ 122 (388)
T PRK08637 46 IPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF-VDQGDTVLLPDHNWGNYKLTFN--TRRGAEIVTYP 122 (388)
T ss_pred CHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh-cCCCCEEEEcCCCCccHHHHHH--HhcCCEEEEec
Confidence 4555666666542 33210 16899999999999999998 5789999988877776654322 23589999999
Q ss_pred cC-CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCC
Q 010538 160 VE-EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISP 238 (508)
Q Consensus 160 ~~-~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~ 238 (508)
+. ++..+ |+++++ +.++. ...+.++++++++++||||.+++.+++.++++ +
T Consensus 123 ~~~~~~~~---------------d~~~l~--~~~~~--~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~---------~ 174 (388)
T PRK08637 123 IFDEDGGF---------------DTDALK--EALQA--AYNKGKVIVILNFPNNPTGYTPTEKEATAIVE---------A 174 (388)
T ss_pred ccCCCCcC---------------CHHHHH--HHHHh--hccCCCEEEEEeCCCCCCCCCCCHHHHHHHHH---------H
Confidence 83 33334 577777 55431 11245577888999999999999888887766 2
Q ss_pred CC-----CCCeEEEEeccccC----CCCCCCC-C---CC--CCc-EEEEeccccccCCCc--ceEEEEe------chhHh
Q 010538 239 FS-----KGRWMVLIDAAKGC----VTQPPDL-S---KY--PVD-FVVMSFYKIFGYPTG--LGALIMR------NDAAK 294 (508)
Q Consensus 239 ~~-----~~g~~vivD~a~~~----g~~~~d~-~---~~--~~D-~~~~S~~K~~g~P~G--~G~l~~~------~~~~~ 294 (508)
|+ +++++||+|.++.. +....++ . .. ++- +.+.|++|.++.| | +||+++. +++.+
T Consensus 175 ~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~p-GlRlG~~~~~~~~~~~~~l~~ 253 (388)
T PRK08637 175 IKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVW-GFRVGFITFGTKAGSSQTVKE 253 (388)
T ss_pred HHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCc-ccceEEEEEccccCCcHHHHH
Confidence 32 28999999998752 2111121 1 11 221 2345999987745 6 8999975 34544
Q ss_pred hhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 295 LLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN-SLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 295 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
.+...... ..+......+.....++..+++.-. ...+....+.+++..+.+.+.|++..
T Consensus 254 ~~~~~~~~--------------------~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~ 313 (388)
T PRK08637 254 ALEKKVKG--------------------LIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGK 313 (388)
T ss_pred HHHHHHHH--------------------HhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 44321100 0000111223333344443432100 00123333445555566666665431
Q ss_pred CCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH-hhCCCeeccCCCCCchHHHhhcCCChhhhhh
Q 010538 374 HENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHSDLLS 452 (508)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~ 452 (508)
..+++.+..+.+ +.++|+++++. +..++.+.| +++||.+...
T Consensus 314 ---~~~~~~~~~~~~--------g~~~~~~l~~~-----~~~~l~~~l~~~~gv~~~~~--------------------- 356 (388)
T PRK08637 314 ---YDDAWQAYPFNS--------GYFMCLKLKGV-----DAEELRVHLLEKYGIGTIAL--------------------- 356 (388)
T ss_pred ---CCCCcccccccc--------eEEEEecCChH-----HHHHHHHHHhhhcceEEEec---------------------
Confidence 012455554433 67888888632 233466666 5789987531
Q ss_pred hhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 453 NIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
..+++|++++. .+.++++..++.|.++++-
T Consensus 357 ------------------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 357 ------------------NETDLRIAFSC-VEEEDIPELFDSIYKAIKD 386 (388)
T ss_pred ------------------cCCceEEEeec-CCHHHHHHHHHHHHHHHHh
Confidence 14679999986 6789999999998887763
No 261
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=3e-17 Score=169.44 Aligned_cols=241 Identities=16% Similarity=0.070 Sum_probs=161.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHH-HHHHhcCCeEEEEcc
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIR-EYALSQGAAAFAIDV 160 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~-~~~~~~G~~v~~v~~ 160 (508)
.....+++.+.++++.|.+. .+.+++++.|+.+++.++ +++||+||++...|.....+. ..+...|++++.++.
T Consensus 62 ~~P~~~~lE~~la~leg~~~----av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAEH----ALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred CChhHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 34556778899999999864 356667778999999998 788999999887776666554 566778999999988
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+....++ +. .+++++|++.++.||++.+.|+++|.++||+
T Consensus 137 ~~~~~~~------------------l~-----------~~~tklv~~e~~snpt~~v~Di~~I~~la~~----------- 176 (384)
T PRK06434 137 DRLNSLD------------------FD-----------PSNYDLIYAESITNPTLKVPDIKNVSSFCHE----------- 176 (384)
T ss_pred CChhhee------------------ec-----------CCCeeEEEEEcCCCCCceeecHHHHHHHHHH-----------
Confidence 6422220 11 2368999999999999999999999999997
Q ss_pred CCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEech-hHhhhccccccCceEEecccchhhhh
Q 010538 241 KGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRND-AAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 241 ~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
++ ++||++++.+...-.+ ..++|++++|.||+++++.+ -|+++.+++ ..++++....
T Consensus 177 -~~--lvVD~t~~s~~~~~pl-~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~---------------- 236 (384)
T PRK06434 177 -ND--VIVDATFASPYNQNPL-DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK---------------- 236 (384)
T ss_pred -cC--eEEECCCCCcccCCch-hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH----------------
Confidence 77 4679998765442222 35799999999999987764 355555443 3333321100
Q ss_pred hccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcc--cC
Q 010538 318 RRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVS--YH 394 (508)
Q Consensus 318 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~--~~ 394 (508)
......+. +.+++-...-..++.+.++..++++.+.+.|++.+ .+ +++-|.-.... ..
T Consensus 237 --------~~G~~~~~-----~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p------~v~~V~yPgl~~~~~~~~ 297 (384)
T PRK06434 237 --------TLGSNPDP-----IQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSK------KISNVYYPDTEIGKKVLR 297 (384)
T ss_pred --------hcCCCCCH-----HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCC------CccEEECCChHHHHHhcC
Confidence 00111121 22222222223467788888999999999998874 44 34333310000 00
Q ss_pred CCCceEEEEeeC
Q 010538 395 DTGSMVSFNLKR 406 (508)
Q Consensus 395 ~~~~~v~~~~~~ 406 (508)
.-+++++|.+++
T Consensus 298 g~g~~~sf~l~~ 309 (384)
T PRK06434 298 GFGGMLSFELRS 309 (384)
T ss_pred CCCceEEEEECC
Confidence 127899999964
No 262
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.79 E-value=4.3e-17 Score=181.04 Aligned_cols=309 Identities=12% Similarity=0.061 Sum_probs=227.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCC--CCCCeEEEecccccchHHHHH-HHHhcCCeEE
Q 010538 80 LATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPW--SHQSSYMYTMENHNSVLGIRE-YALSQGAAAF 156 (508)
Q Consensus 80 ~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~--~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~ 156 (508)
...-+.+-..+..++++.|.+.. +..+..++|.+.++++.+... +++++|++++..||.+...++ +++..|++++
T Consensus 105 QG~Le~l~e~Qt~i~eLtGm~~a--NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 105 QGRLEALLNFQTVVSDLTGLPVA--NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCCChh--hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 34556667789999999999987 788899999888877777432 334789999999999887666 6677899999
Q ss_pred EEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 157 AIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 157 ~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
.++.+ +++ +.+ ++..++++. .|..|.+.|+++|.+++|+
T Consensus 183 ~~~~~-----------------------~l~--~~~--------~~~~v~~q~-Pn~~G~ied~~~i~~~~h~------- 221 (939)
T TIGR00461 183 VVDCS-----------------------DIK--KAV--------DVFGCLLQY-PATDGSILDYKQLIDALHS------- 221 (939)
T ss_pred EEcHH-----------------------HHh--hcC--------CEEEEEEEC-CCCCeEEecHHHHHHHHHH-------
Confidence 88542 233 221 356666665 4778999999999999998
Q ss_pred CCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccc-----ccCCCcceEEEEechhHhhhccccccCceEEeccc
Q 010538 237 SPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKI-----FGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIA 311 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~-----~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 311 (508)
+|+++++++.........+..++|+|+++++.++| ||||. .|++.+++++...+...+.|+..-.....
T Consensus 222 -----~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~l~r~lPgrivG~s~D~~G~~ 295 (939)
T TIGR00461 222 -----HKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPH-AAFFAVKDEYNRKMPGRIVGVSKDALGNT 295 (939)
T ss_pred -----cCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCc-eeeeeecHhhHhhCCCCceeEEecCCCCc
Confidence 89999998877777777888899999998888874 33563 79999999987777666665421000000
Q ss_pred chhhhhhccCccccccCCCCChhHHH---HHHHH--HHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecC
Q 010538 312 DIDFVKRRQGVEELFEDGTASFLSIA---SIRHG--FNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGT 386 (508)
Q Consensus 312 ~~~~~~~~~~~~~~~~~gt~~~~~~~---~l~~a--l~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~ 386 (508)
...+......+.-+++-+|.|+-..- ++.++ +.++...|++++.+++..++.+|.+.|.+. |+++..+
T Consensus 296 ~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-------G~~~~~~ 368 (939)
T TIGR00461 296 ALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-------PHELINK 368 (939)
T ss_pred cceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCC
Confidence 01111112234677888898875433 33335 567777899999999999999999999885 7888766
Q ss_pred CCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccc
Q 010538 387 YTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDI 466 (508)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 466 (508)
+- ...+.++++..+ ..++.+.|.++||.++..
T Consensus 369 ~f--------F~~~~v~~~~~~-----~~~i~~~~~~~gi~l~~~----------------------------------- 400 (939)
T TIGR00461 369 TW--------FDTLTVKVGNGI-----SSELLKAAEEFNINLRAV----------------------------------- 400 (939)
T ss_pred Cc--------cceEEEEeCCCC-----HHHHHHHHHHCCCeeeec-----------------------------------
Confidence 21 455666663222 245888999999997652
Q ss_pred cCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 467 IHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 467 ~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
.++.+++|++-++|.+||+.+++++.
T Consensus 401 ----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 ----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 14689999999999999999999984
No 263
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.1e-17 Score=158.53 Aligned_cols=324 Identities=14% Similarity=0.054 Sum_probs=224.4
Q ss_pred CHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeE
Q 010538 53 SELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSY 131 (508)
Q Consensus 53 ~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~v 131 (508)
+|.++++..+.+ .++-..+.+ ....| +.+.....+.++|++-+-+. .++.+++-.|++.++.++ ..+.+.|
T Consensus 83 hPeii~a~~~al-eeyGaGlssvrfIcG--tq~iHk~LE~kiAqfh~rED----~ilypscfdANag~feai-l~pedAv 154 (417)
T KOG1359|consen 83 HPEIINAGQKAL-EEYGAGLSSVRFICG--TQDIHKLLESKIAQFHGRED----TILYPSCFDANAGAFEAI-LTPEDAV 154 (417)
T ss_pred ChHHHHHHHHHH-HHhCCCccceeEEec--chHHHHHHHHHHHHHhCCCc----eEEeccccccchHHHHHh-cChhhhh
Confidence 777888776544 343334443 23344 45677888999999988763 355566666888888888 6788999
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSEC 211 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~ 211 (508)
+..+.+|.|++..++++++++- +++ -.++ ..+. .+.+.+-++|+...+.
T Consensus 155 fSDeLNhASIIdGirLckry~h----~dv-----------------------~~l~--~~l~--~a~k~r~klv~TDg~F 203 (417)
T KOG1359|consen 155 FSDELNHASIIDGIRLCKRYRH----VDV-----------------------FDLE--HCLI--SACKMRLKLVVTDGVF 203 (417)
T ss_pred hccccccchhhhhhHHHhhhcc----chh-----------------------HHHH--HHHH--HhhhheEEEEEeccee
Confidence 9999999999999998875431 221 1111 1111 1234577999999999
Q ss_pred CCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC--------CCCCCCcEEEEeccccccCCCcc
Q 010538 212 NFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD--------LSKYPVDFVVMSFYKIFGYPTGL 283 (508)
Q Consensus 212 n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d--------~~~~~~D~~~~S~~K~~g~P~G~ 283 (508)
++.|.+.|+++|..++++ +|+++++|.+|+-|..-.. --.-++|++..+..|.+||..|
T Consensus 204 SMDGdiaPl~ei~~La~k------------YgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G- 270 (417)
T KOG1359|consen 204 SMDGDIAPLEEISQLAKK------------YGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG- 270 (417)
T ss_pred ccCCCcccHHHHHHHHHh------------cCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-
Confidence 999999999999999998 9999999999985432221 1122689999999999886665
Q ss_pred eEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 010538 284 GALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGM 363 (508)
Q Consensus 284 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 363 (508)
|+.-.+.+++..++..-- +.-|. .+.++.......++++++.. -..+..+.....+
T Consensus 271 Gyttgp~~li~llrqr~R---------------------pylFS-nslppavV~~a~ka~dllm~--s~~~i~~~~a~~q 326 (417)
T KOG1359|consen 271 GYTTGPKPLISLLRQRSR---------------------PYLFS-NSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQ 326 (417)
T ss_pred CCccCChhHHHHHHhcCC---------------------ceeec-CCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHH
Confidence 888888887665542200 11111 12222222223455665543 3556667788899
Q ss_pred HHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhc
Q 010538 364 YVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYL 443 (508)
Q Consensus 364 ~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~ 443 (508)
++++.+... |+++.+.. .+|..+.+.+... ..+..+.|-+.||.|..-+....|.+
T Consensus 327 rfr~~me~a-------GftIsg~~---------hPI~pv~lGda~l----A~~~ad~lLk~Gi~Vigfs~PvVP~g---- 382 (417)
T KOG1359|consen 327 RFREFMEAA-------GFTISGAS---------HPICPVMLGDARL----ASKMADELLKRGIYVIGFSYPVVPKG---- 382 (417)
T ss_pred HHHHHHHhc-------CceecCCC---------CCccceecccHHH----HHHHHHHHHhcCceEEeecCCcCCCC----
Confidence 999998875 89987654 4677777765321 23467788889999988666555542
Q ss_pred CCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 444 GLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 444 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
...+|+.++..+|+||||++++++.+..+|.+.
T Consensus 383 ----------------------------kariRVqiSAaHt~edid~~i~Af~~vgr~~~~ 415 (417)
T KOG1359|consen 383 ----------------------------KARIRVQISAAHTEEDIDRLIEAFSEVGRFLNV 415 (417)
T ss_pred ----------------------------ceEEEEEEehhcCHHHHHHHHHHHHHHHHhhcc
Confidence 467999999999999999999998887777543
No 264
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=7.8e-18 Score=153.21 Aligned_cols=166 Identities=20% Similarity=0.187 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
++++++.++++++.+.+ ++++++|+|+|+.+++.++ ..+++.|+++...|++... ..+...|++++.++.+....
T Consensus 2 ~~~~~~~l~~~~~~~~~--~~~~~~~~t~a~~~~~~~~-~~~~~~v~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 2 LEELEEKLARLLQPGND--KAVFVPSGTGANEAALLAL-LGPGDEVIVDANGHGSRYW--VAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHHcCCCCC--cEEEeCCcHHHHHHHHHHh-CCCCCEEEEeecccceehh--hHHHhcCCEEEEeccCCCCc
Confidence 46788999999986666 7999999999999999998 4568899999999988863 34456799999998865433
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeE
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWM 245 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~ 245 (508)
.. . +.++++ +. ...++++++++++++|++|...|+++|.++|++ +|++
T Consensus 77 ~~-~------------~~~~~~--~~-----~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~------------~~~~ 124 (170)
T cd01494 77 GG-L------------DVAILE--EL-----KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKE------------YGIL 124 (170)
T ss_pred cc-h------------hhhhhh--hc-----cccCceEEEEEecCcCCCCeEcCHHHHHHHHHH------------cCCE
Confidence 21 0 112333 21 225788999999999999999999999999998 8999
Q ss_pred EEEeccccCCCCCC---CCCCCCCcEEEEeccccccCCCcceEEEEe
Q 010538 246 VLIDAAKGCVTQPP---DLSKYPVDFVVMSFYKIFGYPTGLGALIMR 289 (508)
Q Consensus 246 vivD~a~~~g~~~~---d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~ 289 (508)
+++|++++.+..+. +....++|+++.|+||++++ .|+|+++++
T Consensus 125 li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 125 LLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred EEEecccccccccccccccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 99999999877765 56677899999999999995 589999875
No 265
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.78 E-value=8.2e-17 Score=163.11 Aligned_cols=331 Identities=15% Similarity=0.061 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA 163 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~ 163 (508)
....+.++++++++|++.. +.++|+|.|+.+++.++...+||+||++...+.+.. +..-..|++++.|+++.+
T Consensus 34 ~~v~~FE~~~ae~~G~k~a----va~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa---n~i~~~Ga~PVFvDid~~ 106 (374)
T COG0399 34 PFVRRFEQAFAEYLGVKYA----VAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA---NAVLLVGAKPVFVDIDPD 106 (374)
T ss_pred hHHHHHHHHHHHHhCCCeE----EEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH---HHHHHcCCeEEEEecCCc
Confidence 3467788999999999854 777888889999999887899999999987665544 444456999999999964
Q ss_pred -cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 164 -VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 164 -~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
..+ |++.++ ++| +++||.|+..|. -|...|+++|.++|++ |
T Consensus 107 T~ni---------------d~~~ie--~aI------t~~tKAIipVhl---~G~~~dm~~i~~la~~------------~ 148 (374)
T COG0399 107 TLNI---------------DPDLIE--AAI------TPRTKAIIPVHL---AGQPCDMDAIMALAKR------------H 148 (374)
T ss_pred ccCC---------------CHHHHH--HHc------ccCCeEEEEehh---ccCCCCHHHHHHHHHH------------c
Confidence 566 799999 554 778999998876 6999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCCC--CcEEEEecc--ccccCCCcceEEEEech-hHhhhccccccCceEEecccchhhhh
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYP--VDFVVMSFY--KIFGYPTGLGALIMRND-AAKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~--~D~~~~S~~--K~~g~P~G~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
|++||.|++|+.|..--.- +.| -|+-++|+| |.+..-.| |.+..+++ +.++++-....|..... .|..
T Consensus 149 ~l~vIEDaAqa~Ga~y~gk-~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~ela~k~~~lr~hG~~~~~-----~~~y 221 (374)
T COG0399 149 GLPVIEDAAQAHGATYKGK-KVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEELAEKARSLRNHGLSRDA-----VFKY 221 (374)
T ss_pred CCeEEEEcchhccCeecCc-ccccccceEEEEecCCCCccccCc-eEEEeCCHHHHHHHHHHHHhCcCCCc-----cccc
Confidence 9999999999998764332 222 256666666 76661223 66666654 34444333222211000 0000
Q ss_pred hccCccccccCCC-CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCC
Q 010538 318 RRQGVEELFEDGT-ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDT 396 (508)
Q Consensus 318 ~~~~~~~~~~~gt-~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 396 (508)
...+.|. .. +--+.+|+.+.+-..++++.++-+++.++..+.|++++ ++.+..+... ..+
T Consensus 222 ------~~~~~G~N~r---m~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~------~~~~p~~~~~----~~~ 282 (374)
T COG0399 222 ------LHEELGYNYR---LTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLP------GITLPPEPDG----AVH 282 (374)
T ss_pred ------eeeecccccC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CccccCCCCC----cee
Confidence 0001111 11 22233333333223367777777889999999998873 4544433321 111
Q ss_pred -CceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceE
Q 010538 397 -GSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAI 475 (508)
Q Consensus 397 -~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 475 (508)
..+..+.+++. ..+...+...|+++||. .+.++.+-..++++.. .+......-++ -.......+
T Consensus 283 ~~~~~~i~~~~~---~~~R~~l~~~L~~~gi~--~~~~~~P~~~~~~~~~--------~~~~~~~~lp~--ae~~~~r~l 347 (374)
T COG0399 283 AWHLYTILVDEE---GISRDALMESLKEAGVG--AVVYFRPLHLQPAYRQ--------LGYFPEGDLPN--AEDLSERIL 347 (374)
T ss_pred eeeeeEEEecCC---CCCHHHHHHHHHhCCCC--ceEEeeccccchhhhc--------ccccccCCCch--HHHHhhCeE
Confidence 23334444432 23456699999999888 2223322111111110 00000000000 001135689
Q ss_pred EEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 476 RVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 476 Ris~~~~~t~eev~~l~~~~~~~~~ 500 (508)
++-++..-|.+|++++++.++++++
T Consensus 348 ~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 348 SLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred EccCCCCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998764
No 266
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.78 E-value=3.2e-16 Score=163.77 Aligned_cols=339 Identities=12% Similarity=0.065 Sum_probs=210.2
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+. |--+|.+++++.+... . +......+ .....+.+++.++++.+. + .++|++++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~-~-~~~~~~~~-----~~~~~~~~~~~l~~~~~~--~--~~~~~~SG 97 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQ-K-LTLTSRAF-----YNDVLGLAEKYITDLFGY--D--KVLPMNSG 97 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHH-h-cccccccc-----cCHHHHHHHHHHHhCCCC--C--EEEEeCCc
Confidence 67778887542 2248888888766542 2 11111111 134677888899988875 3 68899999
Q ss_pred HHHHHHHHhhcC--------C-CCCCeEEEecc-cccchHHHHHHHHhcCCeEE--EEccCCcc-Ccccccccccccccc
Q 010538 113 TAALKLVGEAFP--------W-SHQSSYMYTME-NHNSVLGIREYALSQGAAAF--AIDVEEAV-DNDGLSESLVTSTKI 179 (508)
Q Consensus 113 t~al~~~~~~l~--------~-~~g~~vl~~~~-~h~s~~~~~~~~~~~G~~v~--~v~~~~~~-~~~~l~~~~~~~~~~ 179 (508)
++|+..++.... . ..++.|++... .|........... +.... ..+..... .+.
T Consensus 98 s~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------------ 163 (400)
T PTZ00125 98 AEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST--DPKCYNNFGPFVPGFELVD------------ 163 (400)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC--CcchhccCCCCCCCceEeC------------
Confidence 999998887652 0 12355665554 4444443333211 10000 00110000 000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-C
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-C 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~ 254 (508)
-.|+++++ +.+. .+++++|++..++|++|.+.| +++|.++|++ +|+++|+|++|+ +
T Consensus 164 ~~d~~~le--~~l~-----~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~------------~~~lli~Dev~~g~ 224 (400)
T PTZ00125 164 YNDVEALE--KLLQ-----DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKK------------YNVLLIVDEIQTGL 224 (400)
T ss_pred CCCHHHHH--HHhC-----CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEeccccCC
Confidence 01577888 6653 257899999999999999998 8888888887 999999999986 4
Q ss_pred CCC----CCCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 255 VTQ----PPDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 255 g~~----~~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
|.. ..+......|++++| |.++++. .+|++++++++.+.+.....+. . .
T Consensus 225 g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~~~~~~~~~~-----------------------t-~ 278 (400)
T PTZ00125 225 GRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDDVMLVIKPGEHGS-----------------------T-Y 278 (400)
T ss_pred CccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHHHHhhccCCCCCC-----------------------C-C
Confidence 321 122233356887765 9888432 4899999999877655321100 0 1
Q ss_pred CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC
Q 010538 330 TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG 409 (508)
Q Consensus 330 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 409 (508)
+.+....++..++++++.+.+ +.++..++.+++++.|+++.. ..+.+..+.+ .+.++++.++..+.
T Consensus 279 ~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~--~~~~~~~~~~---------~g~~~~v~~~~~~~ 344 (400)
T PTZ00125 279 GGNPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLK--KSPWVKEIRG---------KGLLNAIVFDHSDG 344 (400)
T ss_pred CcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHh--cCCCeEEEec---------ccEEEEEEEccCcc
Confidence 123445556666788776543 456677778888888866410 0012221211 16677777754221
Q ss_pred CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHH
Q 010538 410 SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAK 489 (508)
Q Consensus 410 ~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~ 489 (508)
.....+.+.|.++||.+.++. .+.+||++++.+|.+|++
T Consensus 345 --~~~~~~~~~l~~~Gv~v~~~~---------------------------------------~~~lRi~~~~~~~~~~i~ 383 (400)
T PTZ00125 345 --VNAWDLCLKLKENGLLAKPTH---------------------------------------DNIIRFAPPLVITKEQLD 383 (400)
T ss_pred --hHHHHHHHHHHHCCeEEeecC---------------------------------------CCEEEEECCccCCHHHHH
Confidence 233457788888999987631 468999999999999999
Q ss_pred HHHHhhhhhhhhh
Q 010538 490 VNRCSSFDFVNFS 502 (508)
Q Consensus 490 ~l~~~~~~~~~~~ 502 (508)
++++.+.+.++-+
T Consensus 384 ~~l~~l~~~l~~~ 396 (400)
T PTZ00125 384 QALEIIKKVLKSF 396 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999877654
No 267
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.3e-16 Score=166.61 Aligned_cols=160 Identities=13% Similarity=0.023 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHH-HHhcCCeEEEEccCC
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREY-ALSQGAAAFAIDVEE 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~-~~~~G~~v~~v~~~~ 162 (508)
...+.+++.+|++.|... .+.++|++.|+.+++.++ .++||+||++...|.+....... +...|+++.+++..
T Consensus 61 Ptv~~lE~~la~leg~~~----av~~~SG~aAi~~al~al-l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~- 134 (432)
T PRK06702 61 PTLAAFEQKLAELEGGVG----AVATASGQAAIMLAVLNI-CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPN- 134 (432)
T ss_pred cHHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHh-cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCC-
Confidence 346778999999999964 467899999999999888 78999999999777766555443 57789999998642
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
+ |+++++ ++| +++|++|++.++.||++.+.|+++|.++|++ +
T Consensus 135 ---~---------------d~~~l~--~~I------~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~------------~ 176 (432)
T PRK06702 135 ---L---------------TADEIV--ALA------NDKTKLVYAESLGNPAMNVLNFKEFSDAAKE------------L 176 (432)
T ss_pred ---C---------------CHHHHH--HhC------CcCCeEEEEEcCCCccccccCHHHHHHHHHH------------c
Confidence 2 467788 554 6789999999999999999999999999998 9
Q ss_pred CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-ceEEEE
Q 010538 243 RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-LGALIM 288 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-~G~l~~ 288 (508)
|+++++|.+.+.+.. ....+.++|+++.|.+|+++|..+ +|.+++
T Consensus 177 gi~livD~T~~tP~~-~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 177 EVPFIVDNTLATPYL-CQAFEHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred CCEEEEECCCCchhh-CChhhcCCCEEEEccccccCCCcceeceEEE
Confidence 999999999853311 122356899999999999997755 444443
No 268
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=2.8e-16 Score=163.69 Aligned_cols=334 Identities=13% Similarity=0.083 Sum_probs=201.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .+.-+|.+++++.++.. ...... ..+ ......++.++++++.+ .+ +++|++|+
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~-~~~~~~-~~~-----~~~~~~~la~~l~~~~~--~~--~v~~~~sG 97 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAE-KLWHVS-NLY-----RIPEQERLAERLVENSF--AD--KVFFTNSG 97 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHH-hcCccc-ccc-----CChHHHHHHHHHHhhCC--CC--EEEEcCCc
Confidence 6788999755 35557888888766543 211111 111 12334556677777763 35 79999999
Q ss_pred HHHHHHHHhhcC---CCCC----CeEEEecccccchHHHHHHHHhcCCeEEE---EccCCccC-cccccccccccccccc
Q 010538 113 TAALKLVGEAFP---WSHQ----SSYMYTMENHNSVLGIREYALSQGAAAFA---IDVEEAVD-NDGLSESLVTSTKISL 181 (508)
Q Consensus 113 t~al~~~~~~l~---~~~g----~~vl~~~~~h~s~~~~~~~~~~~G~~v~~---v~~~~~~~-~~~l~~~~~~~~~~~~ 181 (508)
++|+..++.++. ..+| .+|++.+..|++...+...+ .+..... .|...+.. +. -+
T Consensus 98 seA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~ 163 (389)
T PRK01278 98 AEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAA--GGQEKYLEGFGPLVPGFDQVP------------FG 163 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhc--cCChhhcccCCCCCCCceEeC------------CC
Confidence 999999877652 2233 37887776666554333222 1211110 01111000 00 02
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCc-cccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCCC-
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSG-SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQP- 258 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG-~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~~- 258 (508)
|++.++ +++ ++++++|++..+++++| ..+|.+.+.++++ +|+++|+++|+|++|+ +|...
T Consensus 164 d~~~l~--~~l------~~~~~avivep~~~~~G~~~~~~~~l~~l~~---------l~~~~g~~lI~DEv~~g~g~~g~ 226 (389)
T PRK01278 164 DIEALK--AAI------TPNTAAILIEPIQGEGGIRPAPDEFLKGLRQ---------LCDENGLLLIFDEVQCGMGRTGK 226 (389)
T ss_pred CHHHHH--Hhh------CCCeEEEEEecccCCCCCcCCCHHHHHHHHH---------HHHHcCCEEEEeccccCCCcCCc
Confidence 577888 555 35789999999999999 5556555555444 4445999999999987 32211
Q ss_pred ---CCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCCh
Q 010538 259 ---PDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASF 333 (508)
Q Consensus 259 ---~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 333 (508)
.+......|++ +++|.++ + | +|+++++++..+.+.....+ .. .+.|.
T Consensus 227 ~~~~~~~~~~pdi~--t~sK~l~-~-G~~ig~~~~~~~~~~~~~~~~~~-----------------------~t-~~~~~ 278 (389)
T PRK01278 227 LFAHEWAGVTPDIM--AVAKGIG-G-GFPLGACLATEEAAKGMTPGTHG-----------------------ST-YGGNP 278 (389)
T ss_pred ceeecccCCCCCEE--EEehhcc-C-CcceEEEEEcHHHHhccCCCCCC-----------------------CC-CCccH
Confidence 11222345654 5679887 5 4 89999998876655432111 11 12445
Q ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccC
Q 010538 334 LSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFG 413 (508)
Q Consensus 334 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 413 (508)
...++..++++.+.+ +...++..++.+++.+.|+.+.. ..++ ++..... .+.++++.+.. +
T Consensus 279 ~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~l~~--~~~~--~~~~v~g------~G~~~~i~~~~------~ 339 (389)
T PRK01278 279 LAMAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEGLVD--RFPD--VIEEVRG------KGLLLGLKCVV------P 339 (389)
T ss_pred HHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHh--hCCC--ceeeEec------ccEEEEEEEec------C
Confidence 556666677887644 34556777777777777765421 0011 1111111 15666666632 1
Q ss_pred HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHH
Q 010538 414 YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRC 493 (508)
Q Consensus 414 ~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~ 493 (508)
...+.+.|.++||.+.++. .+.+|+++++..|+++++++++
T Consensus 340 ~~~~~~~l~~~GV~~~p~~---------------------------------------~~~lR~~p~~~~~~~~i~~~l~ 380 (389)
T PRK01278 340 NRDLVQALRDEGLLTVGAG---------------------------------------DNVVRLLPPLIITEEEIDEALE 380 (389)
T ss_pred HHHHHHHHHHCCeEEeecC---------------------------------------CCEEEEeCCcccCHHHHHHHHH
Confidence 2347788888899987641 4689999998899999999999
Q ss_pred hhhhhhh
Q 010538 494 SSFDFVN 500 (508)
Q Consensus 494 ~~~~~~~ 500 (508)
.+.++++
T Consensus 381 ~l~~~l~ 387 (389)
T PRK01278 381 RLERAAE 387 (389)
T ss_pred HHHHHHH
Confidence 9988764
No 269
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.76 E-value=7.9e-16 Score=162.03 Aligned_cols=339 Identities=13% Similarity=0.091 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhc--------CCCCCCeEEEecccccchHHHHHHHHhcCCeEE
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAF--------PWSHQSSYMYTMENHNSVLGIREYALSQGAAAF 156 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l--------~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~ 156 (508)
...+.++.+|+++|.+ .+++++|+|+|+.+++.++ ..++|++||++...|+++...+. ..|++++
T Consensus 64 ~~~~fe~~lA~~~g~~----~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~---~~G~~pv 136 (438)
T PRK15407 64 FNDAFEKKLAEFLGVR----YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII---QNGLVPV 136 (438)
T ss_pred hHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH---HcCCEEE
Confidence 3677899999999985 4788999999999988876 45789999999988887765544 4599999
Q ss_pred EEccCC-ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccc
Q 010538 157 AIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILE 235 (508)
Q Consensus 157 ~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~ 235 (508)
.++++. ...+ |+++++ +++ +++|++|+++|. +|...++++|.++|++
T Consensus 137 ~vdvd~~~~~i---------------d~~~le--~~i------~~~tkaVi~~~~---~G~p~dl~~I~~la~~------ 184 (438)
T PRK15407 137 FVDVELPTYNI---------------DASLLE--AAV------SPKTKAIMIAHT---LGNPFDLAAVKAFCDK------ 184 (438)
T ss_pred EEecCCCcCCc---------------CHHHHH--HHc------CcCCeEEEEeCC---CCChhhHHHHHHHHHH------
Confidence 998863 3344 688888 444 568899998874 7889999999999998
Q ss_pred cCCCCCCCeEEEEeccccCCCCCCC--CCCCCCcEEEEecc--c-cccCCCcceEEEEechhHhhhccccccCceEEec-
Q 010538 236 ISPFSKGRWMVLIDAAKGCVTQPPD--LSKYPVDFVVMSFY--K-IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAAS- 309 (508)
Q Consensus 236 ~~~~~~~g~~vivD~a~~~g~~~~d--~~~~~~D~~~~S~~--K-~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~- 309 (508)
+|++||+|++|+.|...-+ +...+ |+.++|+| | +..|. | |+++.+++.+....+.+..++.....
T Consensus 185 ------~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~~ge-G-G~l~t~d~~l~~~~~~~~~~G~~~~~~ 255 (438)
T PRK15407 185 ------HNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHITMGE-G-GAVFTNDPLLKKIIESFRDWGRDCWCA 255 (438)
T ss_pred ------CCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCccccC-c-eEEEECCHHHHHHHHHHHHhCcccccc
Confidence 9999999999999887644 23333 88888887 4 33323 5 88888877655433333222211000
Q ss_pred c--c---chhhhhhccCc----cccc---cCCC-CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCC
Q 010538 310 I--A---DIDFVKRRQGV----EELF---EDGT-ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHEN 376 (508)
Q Consensus 310 ~--~---~~~~~~~~~~~----~~~~---~~gt-~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~ 376 (508)
. . ...+....... ...+ ..|. .....+ .+|+-..+-..++.+.++-+++++++.+.|..+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel---~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~-- 330 (438)
T PRK15407 256 PGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDM---QAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED-- 330 (438)
T ss_pred cccccccccccccccccccccccccccccccccccCccHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--
Confidence 0 0 00000000000 0000 1121 111212 22222211122577778888889999999987631
Q ss_pred CCceEEEecCCCCCcccCCCC-ceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcC---CC-hhhhh
Q 010538 377 GADVCTIYGTYTSEVSYHDTG-SMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLG---LS-HSDLL 451 (508)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~---~~-~s~~~ 451 (508)
.+.+...+.. .... ....+.+++.. .++..++.+.|.++||.++..... +-..++++. .. ...+.
T Consensus 331 ---~~~~~~~~~~----~~~~~~~~~i~~~~~~--~~~Rd~l~~~L~~~GI~~~~~~~~-~~~~~p~~~~~~~~~~~~~P 400 (438)
T PRK15407 331 ---FLILPEATPN----SDPSWFGFPITVKEDA--GFTRVELVKYLEENKIGTRLLFAG-NLTRQPYFKGVKYRVVGELT 400 (438)
T ss_pred ---ccccCcCCCC----CeeEEEEEEEEECCcC--CCCHHHHHHHHHHCCCCccccCCC-ccccChhhhhcCCCCCCCCh
Confidence 1222211111 0111 23344443321 234567999999999987753210 000011110 00 00000
Q ss_pred hhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 452 SNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.+ .......+-+-+|..-|++|++++++.++++++
T Consensus 401 ~a--------------e~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 401 NT--------------DRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HH--------------HHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 00 001245677878877899999999999998875
No 270
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.76 E-value=2.8e-16 Score=162.19 Aligned_cols=328 Identities=14% Similarity=0.098 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccC-C
Q 010538 84 DIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVE-E 162 (508)
Q Consensus 84 ~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~-~ 162 (508)
...++.++.+++++|.+ .++.++|+|.|+.+++.++..++|++|+++...++++...+. ..|++++.++++ .
T Consensus 25 ~~~~~fE~~~a~~~g~~----~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~---~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK----YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAIL---WAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHH---HTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHH---HhccEEEEEeccCC
Confidence 45788899999999976 568889999999999999988999999999988877765544 459999999998 4
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
...+ |++.++ +. ++++|+.|+++|. -|...|+++|.++|++ +
T Consensus 98 ~~~i---------------d~~~~~--~~------i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~------------~ 139 (363)
T PF01041_consen 98 TLNI---------------DPEALE--KA------ITPKTKAILVVHL---FGNPADMDAIRAIARK------------H 139 (363)
T ss_dssp TSSB----------------HHHHH--HH------HHTTEEEEEEE-G---GGB---HHHHHHHHHH------------T
T ss_pred cCCc---------------CHHHHH--HH------hccCccEEEEecC---CCCcccHHHHHHHHHH------------c
Confidence 5666 788898 44 4678999998875 6899999999999998 9
Q ss_pred CeEEEEeccccCCCCCCC--CCCCCCcEEEEecc--ccccCCCcceEEEEechh-HhhhccccccCceEEecccchhhhh
Q 010538 243 RWMVLIDAAKGCVTQPPD--LSKYPVDFVVMSFY--KIFGYPTGLGALIMRNDA-AKLLKNTYFSGGTVAASIADIDFVK 317 (508)
Q Consensus 243 g~~vivD~a~~~g~~~~d--~~~~~~D~~~~S~~--K~~g~P~G~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~ 317 (508)
|++||.|++|+.|...-. +... -|+.++|+| |.+....| |+++.+++. .++++.....|.. . .....+
T Consensus 140 ~i~lIeD~a~a~g~~~~g~~~G~~-gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~~-~--~~~~~~-- 212 (363)
T PF01041_consen 140 GIPLIEDAAQAFGARYKGRPVGSF-GDIAIFSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGRS-R--DAFRRY-- 212 (363)
T ss_dssp T-EEEEE-TTTTT-EETTEETTSS-SSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEE-T--SECSTT--
T ss_pred CCcEEEccccccCceeCCEeccCC-CCceEecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCcC-c--cccccc--
Confidence 999999999999864322 1222 389999986 77653434 888887644 3334322211110 0 000000
Q ss_pred hccCccccccCC-CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCC
Q 010538 318 RRQGVEELFEDG-TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDT 396 (508)
Q Consensus 318 ~~~~~~~~~~~g-t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 396 (508)
......| ...+..+.+.. ++..+. .++.+.++-+++.+++.+.|...+ ++.....+.... ...
T Consensus 213 -----~~~~~~g~n~rm~~~~AAi-gl~QL~--~L~~~~~~R~~~a~~y~~~L~~~~------~~~~~~~~~~~~--~~~ 276 (363)
T PF01041_consen 213 -----RHELPPGYNFRMSELQAAI-GLAQLK--RLDEIIARRRENAQRYREALAGIP------GIKPPPIPDGAE--RSS 276 (363)
T ss_dssp -----EESSSS--B-B-BHHHHHH-HHHHHH--THHHHHHHHHHHHHHHHHHHTTGT------TEEEEGCGTTTE--EBC
T ss_pred -----cccccCCcccccHHHHHHH-HHHHHH--HhhhhHHHHHHHHHHHHHHHhcCC------Cccccccccccc--ccc
Confidence 0000001 01111121111 222222 267777788899999999999984 675554333200 011
Q ss_pred CceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCC----hhhhhhhhhcCCccCCCccccCCCCC
Q 010538 397 GSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLS----HSDLLSNIEAGHVCWDDNDIIHGKPT 472 (508)
Q Consensus 397 ~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~----~s~~~~~~~~~~~~~~~~~~~~~~~~ 472 (508)
.....+.+++... .+...+.+.|.++||.++... +.+-..++.+.-. +..+..+- ....
T Consensus 277 ~~~f~i~~~~~~~--~~rd~l~~~L~~~GI~~~~~~-~~pl~~~~~~~~~~~~~~~~~P~ae--------------~l~~ 339 (363)
T PF01041_consen 277 YYRFPIRLPDEAL--ADRDELVEALRARGIETRPHY-PKPLHRQPVYRSYPYYAPGDLPNAE--------------RLSQ 339 (363)
T ss_dssp ESSEEEEETCCGC--STHHHHHHHHHHTTBEEBCST-SSCGGGSGGGTTGEEEETSSSHHHH--------------HHHH
T ss_pred ccccccccccccc--chHHHHHHHHHHCCCcccccc-cCchhhhHHHHhcCccccCCCHHHH--------------HHHh
Confidence 3345556654321 234679999999999998764 1111111111100 00011111 0125
Q ss_pred ceEEEecCCCCCHHHHHHHHHhhh
Q 010538 473 GAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 473 ~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
..+.+-++..-|.+|++++++.|+
T Consensus 340 r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 340 RLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred CeEECcCCCCCCHHHHHHHhhccC
Confidence 689999999999999999998874
No 271
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=6.1e-16 Score=161.39 Aligned_cols=334 Identities=13% Similarity=0.098 Sum_probs=198.5
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. ++-+|.+.+++.+.+ .... .....+ ......++.++++++.+. + ++++++|+
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~-~~~~-~~~~~~-----~~~~~~~la~~l~~~~~~--~--~v~~~~gg 105 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQA-AKLI-HTSNLY-----YIEPQEELAEKLVELSGM--D--KVFFCNSG 105 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHH-hhcc-cccccc-----CCHHHHHHHHHHHhhcCC--C--EEEECCCc
Confidence 67778887652 333577777765543 2211 111111 134556677888888765 5 79999999
Q ss_pred HHHHHHHHhhcCCCCC------CeEEEecccccchHHHHHHHHhcCCeEEE---EccCCccCccccccccccccccccch
Q 010538 113 TAALKLVGEAFPWSHQ------SSYMYTMENHNSVLGIREYALSQGAAAFA---IDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 113 t~al~~~~~~l~~~~g------~~vl~~~~~h~s~~~~~~~~~~~G~~v~~---v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
++|+.+++..+....+ +.|++....+.........+ .+..... .+...+ +.. .-..|+
T Consensus 106 ~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~--~~~---------~~~~d~ 172 (396)
T PRK02627 106 AEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSA--TGQPKYQEGFEPLVEG--FIY---------VPFNDI 172 (396)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHh--cCCccccccCCCCCCC--ceE---------eCCCCH
Confidence 9999999886521111 56766654443332221111 1211111 111110 000 001157
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCc-cccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC----
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSG-SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ---- 257 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG-~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~---- 257 (508)
++++ +++ .+++++|++..++|++| ..+|.+.+.++.+ +|+++|+++|+|++++ +|..
T Consensus 173 ~~l~--~~i------~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~---------l~~~~~~~lI~DE~~~g~g~~g~~~ 235 (396)
T PRK02627 173 EALK--AAI------TDKTAAVMLEPIQGEGGVNPADKEYLQALRE---------LCDENGILLILDEVQTGMGRTGKLF 235 (396)
T ss_pred HHHH--Hhc------CCCeEEEEEecccCCCCCccCCHHHHHHHHH---------HHHHcCCEEEEechhcCCCccCcee
Confidence 7788 554 46789999999999999 5666544444333 3344999999999987 3322
Q ss_pred CCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhH
Q 010538 258 PPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLS 335 (508)
Q Consensus 258 ~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 335 (508)
..+......|++ +++|.++ + | +|++++++++++.+.+.... ...+.+...
T Consensus 236 ~~~~~~~~pdi~--t~sK~~~-~-G~rig~~~~~~~~~~~~~~~~~~------------------------~t~~~~~~~ 287 (396)
T PRK02627 236 AYQHYGIEPDIM--TLAKGLG-G-GVPIGAVLAKEKVADVFTPGDHG------------------------STFGGNPLA 287 (396)
T ss_pred eehhcCCCCCEE--EEcchhh-C-CcccEEEEEcHHHHhccCCCCCC------------------------CCCCCCHHH
Confidence 111222245655 4669888 5 4 89999998876655432100 011234455
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHH
Q 010538 336 IASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYR 415 (508)
Q Consensus 336 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 415 (508)
.++..++++.+.+ +...++.+++.+++++.|.++.. ..+.+..+ .+ .+.++++.+.. +..
T Consensus 288 ~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~--~~-------~g~~~~i~~~~------~~~ 347 (396)
T PRK02627 288 CAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLE--KYPGIKEV--RG-------LGLMIGIELDR------PAA 347 (396)
T ss_pred HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHH--hCCCeeee--cc-------CcEEEEEEecC------cHH
Confidence 6666667776544 34567777777777777765420 00112111 11 26778888721 224
Q ss_pred HHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhh
Q 010538 416 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 416 ~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~ 495 (508)
++.+.|.++||.+.++. .+++|+++++..|.++++++++.|
T Consensus 348 ~~~~~l~~~Gv~v~~~~---------------------------------------~~~lRi~~~~~~~~~~i~~~~~~l 388 (396)
T PRK02627 348 EIVKKALEKGLLINVTG---------------------------------------DNVLRLLPPLIISKEEIDEAVDRL 388 (396)
T ss_pred HHHHHHHHCCeEEeecC---------------------------------------CCEEEEECCcccCHHHHHHHHHHH
Confidence 57788888899997741 367999999899999999999999
Q ss_pred hhhhh
Q 010538 496 FDFVN 500 (508)
Q Consensus 496 ~~~~~ 500 (508)
.++++
T Consensus 389 ~~~l~ 393 (396)
T PRK02627 389 EEVLK 393 (396)
T ss_pred HHHHH
Confidence 88764
No 272
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.75 E-value=4.2e-17 Score=167.47 Aligned_cols=293 Identities=17% Similarity=0.118 Sum_probs=187.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~ 162 (508)
...+.++++.+|+.+|++.. ..+++|+|.++..++.++ .++|+.|+++...|-|++..+.+. |+++++++...
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t---~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN~HkSv~~alil~---ga~Pvyi~p~~ 137 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKT---FFLVNGSTSGNQAMIMAL-CRPGDKVLVDRNCHKSVYNALILS---GAIPVYIPPED 137 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEE---EEESSHHHHHHHHHHHHH-TTTTCEEEEETT--HHHHHHHHHH---TEEEEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCeE---EEEecCchHHHHHHHHHh-cCCCCEEEEcCCcHHHHHHHHHHc---CCeEEEecCCc
Confidence 34588899999999999865 788899999999999998 689999999999999998876655 99999997652
Q ss_pred c-cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCC
Q 010538 163 A-VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 163 ~-~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
+ ..+ ...+..-.++.+.++ ++|++.. ....+++|+++++ |..|.+.|+++|.++||+
T Consensus 138 ~~~gi------~~~i~~~~~~~~~i~--~~l~~~p-~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~------------ 195 (417)
T PF01276_consen 138 NEYGI------IGGISPDEFNEEDIE--EALKEHP-DAKAPRLVVLTSP-TYYGVCYDIKEIAEICHK------------ 195 (417)
T ss_dssp -TTS-------BEEB-GGGGSHHHHH--HHHHHCT-TCHCESEEEEESS--TTSEEE-HHHHHHHHCC------------
T ss_pred cccCC------ccCCChhhhhHHHHH--HHHHhCc-cccCceEEEEeCC-CCCeEEECHHHHHHHhcc------------
Confidence 1 111 000111111336676 5554321 1112566888885 668999999999999998
Q ss_pred CCeEEEEeccccC--CC--CCCCCCCCCCc-------EEEEeccccccCCCcceEEEEechh-H--hhhccccccCceEE
Q 010538 242 GRWMVLIDAAKGC--VT--QPPDLSKYPVD-------FVVMSFYKIFGYPTGLGALIMRNDA-A--KLLKNTYFSGGTVA 307 (508)
Q Consensus 242 ~g~~vivD~a~~~--g~--~~~d~~~~~~D-------~~~~S~~K~~g~P~G~G~l~~~~~~-~--~~l~~~~~g~~~~~ 307 (508)
++++|+||+||+. +. .|.+-..+++| +++-|.||++++.+..+++.++.+. + ++++..
T Consensus 196 ~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-------- 267 (417)
T PF01276_consen 196 HGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-------- 267 (417)
T ss_dssp TECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH--------
T ss_pred cCCEEEEEccccccccCCCCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH--------
Confidence 9999999999874 22 23334456899 9999999998878778999998774 2 222221
Q ss_pred ecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 308 ASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
-..+...+|+++.++++..|..++....-+++.++..++++.+++.++++. ...++++++|.
T Consensus 268 ---------------l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~---~~~~~~~~~~~ 329 (417)
T PF01276_consen 268 ---------------LSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLN---DIWGFKVLGPE 329 (417)
T ss_dssp ---------------HHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHC---CT-SSEESS-S
T ss_pred ---------------HHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcC---CCceEecCCcc
Confidence 233456779999999999999988332246677888888999999983311 11356666654
Q ss_pred CCCcc------cC---------------CCCceEEEEeeCC------CCCccCHHHHHHHHhhCCCeecc
Q 010538 388 TSEVS------YH---------------DTGSMVSFNLKRP------DGSWFGYREVEKLASLSGIQLRT 430 (508)
Q Consensus 388 ~~~~~------~~---------------~~~~~v~~~~~~~------~~~~~~~~~l~~~L~~~gI~v~~ 430 (508)
.-... +. --+.=+++.+++. ....+....+.+.|+++||++--
T Consensus 330 ~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek 399 (417)
T PF01276_consen 330 DVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEK 399 (417)
T ss_dssp EECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SE
T ss_pred ccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEe
Confidence 21000 00 0011234444331 12235556789999999999753
No 273
>PLN02397 aspartate transaminase
Probab=99.74 E-value=1.6e-16 Score=167.26 Aligned_cols=297 Identities=11% Similarity=0.028 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHcCCC---C--CCceEEE--cCChHHH--HHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEE
Q 010538 86 VRAAREQVLDYFNAS---M--KDYKCIF--TSGATAA--LKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAF 156 (508)
Q Consensus 86 ~~~~r~~la~~~~~~---~--~~~~i~~--t~g~t~a--l~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~ 156 (508)
..+.|+.+++++.-. . ++ +|.. +.+++.+ +...+..+ ..+|++|++++..|+.+....+ ..|++++
T Consensus 93 ~~~LR~aia~~~~~~~~~~~~~~-~i~~~~i~~g~Ga~~l~~~~~~~-~~pGd~Vlv~~P~y~~y~~~~~---~~g~~~~ 167 (423)
T PLN02397 93 LAEFNKLSAKLAYGADSPAIKEN-RVATVQCLSGTGSLRLGAEFLAR-FYPGSTIYIPNPTWGNHHNIFR---DAGVPVR 167 (423)
T ss_pred CHHHHHHHHHHHcCCCCchhhcC-eeEeeecccchHHHHHHHHHHHH-hCCCCEEEEeCCCchhHHHHHH---HcCCeEE
Confidence 556677777765321 1 11 3311 3333333 33333333 3589999999977777765544 4599999
Q ss_pred EEccC-Cc-cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccc
Q 010538 157 AIDVE-EA-VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERIL 234 (508)
Q Consensus 157 ~v~~~-~~-~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~ 234 (508)
.+|+. .+ ..+ |++.++ +.+.+ ..++++++++++++||||.+++.+++.++++
T Consensus 168 ~v~l~~~~~~~~---------------d~~~l~--~~l~~---~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~------ 221 (423)
T PLN02397 168 TYRYYDPKTRGL---------------DFDGLL--EDLKA---APDGSFVLLHACAHNPTGVDPTPEQWEQISD------ 221 (423)
T ss_pred EeecccCcCCcc---------------CHHHHH--HHHHh---CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHH------
Confidence 99873 22 223 566665 44421 1357899999999999999999998887776
Q ss_pred ccCCCCCCCeEEEEeccccCCCC------CCC---CCCCC-CcEEEEeccccccCCCc--ceEEE--E-echhHhhhccc
Q 010538 235 EISPFSKGRWMVLIDAAKGCVTQ------PPD---LSKYP-VDFVVMSFYKIFGYPTG--LGALI--M-RNDAAKLLKNT 299 (508)
Q Consensus 235 ~~~~~~~~g~~vivD~a~~~g~~------~~d---~~~~~-~D~~~~S~~K~~g~P~G--~G~l~--~-~~~~~~~l~~~ 299 (508)
+|+++|++||+|.++..-.. ... +...+ .-+++.|++|.|+ ++| +||++ + +++.++.+...
T Consensus 222 ---~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~-~~G~RvG~~v~~~~~~~~~~~~~~~ 297 (423)
T PLN02397 222 ---LIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMG-LYGERVGALSVVCKSADVAVRVKSQ 297 (423)
T ss_pred ---HHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCC-CccccceEEEEEeCCHHHHHHHHHH
Confidence 56669999999999753211 011 11111 2377889999999 778 89986 3 34433322211
Q ss_pred cccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHH---Hh--cChHHHHHHHHHHHHHHHHHHhcccC
Q 010538 300 YFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLI---NS--LTVPAICRHIASLGMYVRKVLLSLRH 374 (508)
Q Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~---~~--~g~~~i~~~~~~l~~~l~~~L~~l~~ 374 (508)
+..- .+....+ .+.....++..+++-- .+ ..++.+++++.+.++.+.+.|+++..
T Consensus 298 ~~~~-------------------~~~~~~~-~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~ 357 (423)
T PLN02397 298 LKLI-------------------ARPMYSN-PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGS 357 (423)
T ss_pred HHHH-------------------HhcccCC-CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0000 0001112 2222233333333210 01 01567788999999999999988610
Q ss_pred CCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhh
Q 010538 375 ENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNI 454 (508)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~ 454 (508)
+.++.+..|++ +.++|++++. ....++++++||.+..
T Consensus 358 ---~~~~~~~~p~g--------g~fl~~~l~~--------~~~~~Ll~~~~V~v~~------------------------ 394 (423)
T PLN02397 358 ---PGDWSHITKQI--------GMFSFTGLNK--------EQVDRMTKEYHIYMTR------------------------ 394 (423)
T ss_pred ---CCCCCcccCCc--------eEEEecCCCH--------HHHHHHHHhCCEEECC------------------------
Confidence 01244444443 6777776631 1255566788999852
Q ss_pred hcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 455 EAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.+ |+++.. .+.++++++++.|++.++
T Consensus 395 -----------------~~--Ri~~~~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 395 -----------------DG--RISMAG-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred -----------------CC--eEEEee-CCHHHHHHHHHHHHHHHh
Confidence 23 999963 588999999999998875
No 274
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=7.7e-16 Score=160.61 Aligned_cols=323 Identities=14% Similarity=0.086 Sum_probs=201.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChH-HHHHHHHhhcCCC--CCCeEEEecccccchHHHHHHHHhcCCeEEEE
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGAT-AALKLVGEAFPWS--HQSSYMYTMENHNSVLGIREYALSQGAAAFAI 158 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t-~al~~~~~~l~~~--~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v 158 (508)
...+..++.+.+++++|++... ..++++|+| .++.+++.++... +++.||++...|.++...+.+ .|++++.|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~---~G~~pv~V 178 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST---AGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH---cCCeEEEe
Confidence 4567788899999999997431 467788888 6888888887532 578999999999888766665 49999999
Q ss_pred cc--CC-ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC-CCCCccccCHHHHHHHHcCCcccc
Q 010538 159 DV--EE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE-CNFSGSRFNLDLINIMKKNPERIL 234 (508)
Q Consensus 159 ~~--~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~i~~i~~l~~~~~~~~ 234 (508)
+. ++ ...+ |+++++ ++|.+. ++++.++++..+ ++..|...|+++|.++|++
T Consensus 179 d~~~d~~~~~i---------------D~e~Le--~aIt~~---~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k----- 233 (444)
T TIGR03531 179 ETVLDGDELTT---------------DVEDIE--RAIEEI---GPDNILCVLSTTSCFAPRSPDDIEEIAKICAN----- 233 (444)
T ss_pred eeeecCcCCCc---------------CHHHHH--HHHHhc---cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHH-----
Confidence 85 22 3334 788998 666421 224455555444 3555689999999999998
Q ss_pred ccCCCCCCCeEEEEeccccCCCCCC-CC----CCC-CCcEEEEeccccccCCCcceEEEEe-chhHhhhccccccCceEE
Q 010538 235 EISPFSKGRWMVLIDAAKGCVTQPP-DL----SKY-PVDFVVMSFYKIFGYPTGLGALIMR-NDAAKLLKNTYFSGGTVA 307 (508)
Q Consensus 235 ~~~~~~~~g~~vivD~a~~~g~~~~-d~----~~~-~~D~~~~S~~K~~g~P~G~G~l~~~-~~~~~~l~~~~~g~~~~~ 307 (508)
+|+++|+|++|+.+.... .+ ... .+|++++|+||++..|.+.|+++.+ +++.+.+...+.+.
T Consensus 234 -------~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~---- 302 (444)
T TIGR03531 234 -------YDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGR---- 302 (444)
T ss_pred -------cCCEEEEECcCcCcChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCC----
Confidence 999999999998754321 11 112 3799999999988867665666674 45555554432211
Q ss_pred ecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 308 ASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
..+.+.+ .++.++..+...|++++.++..++++++.+.|+++.. .-|.+++..+
T Consensus 303 ----------------------~~~s~~~-~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~---~~~~~~~~~~ 356 (444)
T TIGR03531 303 ----------------------ASASPSL-DVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAE---RHGERLLDTP 356 (444)
T ss_pred ----------------------CCChHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCcEeecCC
Confidence 0111222 2333444445567899999999999999999987521 1144555432
Q ss_pred CCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCe----eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCC
Q 010538 388 TSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQ----LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDD 463 (508)
Q Consensus 388 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~----v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 463 (508)
.- .--+.+.+....+. +...+...|-.++|. |.+|..-..+. . ....+|.+ |.
T Consensus 357 ~n-------~is~~~~~~~~~~~--~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~-~---------~~~~~~~~--~~-- 413 (444)
T TIGR03531 357 EN-------PISSAMTLSTLKGK--DPTMLGSMLYSRRVTGPRVVTNGDSKTVGG-C---------EFKGYGSH--TS-- 413 (444)
T ss_pred CC-------ceeEEEeccccccc--CHHHHHHHHHhCCCCCceeecCCCceEECC-E---------Eeeccccc--cc--
Confidence 20 12233344332221 234577777666663 23332100000 0 00111111 11
Q ss_pred ccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 464 NDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 464 ~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.+...++-++...-.|.+|||.+++.|.+.
T Consensus 414 -----~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 414 -----NYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred -----CCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 123456777777778999999999887753
No 275
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.73 E-value=3.6e-15 Score=155.96 Aligned_cols=331 Identities=14% Similarity=0.080 Sum_probs=209.3
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. +..+|.+++++.+.... +....... ......++.++++++++. + .+.|++++
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~--~~~~~~~~-----~~~~~~~l~~~l~~~~~~--~--~~~~~~SG 103 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQK--LTLSSRAF-----YNDVFGEFAEYVTKLFGY--D--KVLPMNTG 103 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHh--cccccccc-----CCHHHHHHHHHHHhhcCC--C--EEEEeCcc
Confidence 56678887542 22378888887665432 11111111 234567788889999874 3 68999999
Q ss_pred HHHHHHHHhhcC---------CCCCCeEEEeccc-ccchHHHHHHHHh------cC---CeEEEEccCCccCcccccccc
Q 010538 113 TAALKLVGEAFP---------WSHQSSYMYTMEN-HNSVLGIREYALS------QG---AAAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 113 t~al~~~~~~l~---------~~~g~~vl~~~~~-h~s~~~~~~~~~~------~G---~~v~~v~~~~~~~~~~l~~~~ 173 (508)
++|+..++.... ..++..|++.... |.++...+..... .+ ..+..+|..
T Consensus 104 s~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 171 (401)
T TIGR01885 104 AEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN------------ 171 (401)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC------------
Confidence 999998887641 1234567766655 4444444332110 11 112222221
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
|++.++ +.+++. .+++..|++..+.+++|.+.| +++|.++|++ +|+++++|
T Consensus 172 --------d~~~le--~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~------------~~~lli~D 226 (401)
T TIGR01885 172 --------NLEALE--EALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK------------HNVLLIAD 226 (401)
T ss_pred --------CHHHHH--HHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEe
Confidence 355566 555321 356788889999999999998 7888888887 99999999
Q ss_pred cccc-CCC--CC--CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVT--QP--PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~--~~--~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
++|. +|. .. .+...+..|++++| |.+++. .-+|+++.++++++.+.+...+
T Consensus 227 Ev~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~~~~~~~~~~--------------------- 283 (401)
T TIGR01885 227 EIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVMLTIKPGEHG--------------------- 283 (401)
T ss_pred chhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHHhhccCCCCC---------------------
Confidence 9975 221 11 12233467888765 977732 1278899988887655432110
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 324 ELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 324 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
.. .+.+....++..++++.+.+. .+.++..++.+++++.|+++.. .++..... .+.+..+.
T Consensus 284 --~t-~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~~-------~~~~~~~g------~g~~~~i~ 344 (401)
T TIGR01885 284 --ST-YGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLPK-------PIITEVRG------RGLLNAIV 344 (401)
T ss_pred --CC-CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhccC-------CceeEEee------cCeeEEEE
Confidence 01 122455566777788887653 4567888899999999998731 22211111 26676666
Q ss_pred eeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC
Q 010538 404 LKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS 483 (508)
Q Consensus 404 ~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 483 (508)
++.... .....++.+.|.++||.+.++ .++.+|+++++..
T Consensus 345 ~~~~~~-~~~~~~l~~~l~~~Gv~v~~~---------------------------------------~~~~lRi~p~l~~ 384 (401)
T TIGR01885 345 IDESKT-GRTAWDLCLKLKEKGLLAKPT---------------------------------------HGNIIRLAPPLVI 384 (401)
T ss_pred eccCcc-hhHHHHHHHHHHhCCEEEEec---------------------------------------CCCEEEEeCCccC
Confidence 644311 112346888888999998652 1468999999999
Q ss_pred CHHHHHHHHHhhhhhh
Q 010538 484 TFEDAKVNRCSSFDFV 499 (508)
Q Consensus 484 t~eev~~l~~~~~~~~ 499 (508)
|++||++++++|.+++
T Consensus 385 t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 385 TEEQLDEGLEIIKKVI 400 (401)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998765
No 276
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.72 E-value=2e-15 Score=155.65 Aligned_cols=244 Identities=16% Similarity=0.103 Sum_probs=163.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEcc
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDV 160 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~ 160 (508)
.......+++.++++-|+. .+++++++..|+..++.++ .++|++|+++..-|.......+ .+...|+++..++.
T Consensus 53 gnPt~~~le~~la~Le~g~----~a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 53 GNPTVRALEQRLAALEGGE----DALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp C-HHHHHHHHHHHHHHT-S----EEEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred ccccHHHHHHHHHHhhccc----ceeeccchHHHHHHHHHhh-cccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 3455677889999999984 4677788888999888888 6889999999888877776655 46778999999876
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
. |+++++ +++ .++|++|++..+.||+..+.|+++|++++|+
T Consensus 128 ~--------------------d~~~l~--~~l------~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~----------- 168 (386)
T PF01053_consen 128 T--------------------DLEALE--AAL------RPNTKLVFLESPSNPTLEVPDLEAIAKLAKE----------- 168 (386)
T ss_dssp T--------------------SHHHHH--HHH------CTTEEEEEEESSBTTTTB---HHHHHHHHHH-----------
T ss_pred h--------------------hHHHHH--hhc------cccceEEEEEcCCCcccccccHHHHHHHHHH-----------
Confidence 3 356666 444 4689999999999999999999999999998
Q ss_pred CCC-eEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEec--hhHhhhccccccCceEEecccchhh
Q 010538 241 KGR-WMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRN--DAAKLLKNTYFSGGTVAASIADIDF 315 (508)
Q Consensus 241 ~~g-~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~ 315 (508)
+| ++++||.+.+.+.. .+.-+.|+|+++.|+.|.++|-.. .|++++++ +..+.++..
T Consensus 169 -~g~~~~vVDnT~atp~~-~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~---------------- 230 (386)
T PF01053_consen 169 -HGDILVVVDNTFATPYN-QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF---------------- 230 (386)
T ss_dssp -TTT-EEEEECTTTHTTT-C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH----------------
T ss_pred -hCCceEEeeccccceee-eccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcch----------------
Confidence 88 99999999866532 233345799999999999985532 57777665 444333321
Q ss_pred hhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCccc-
Q 010538 316 VKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSY- 393 (508)
Q Consensus 316 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~- 393 (508)
.+....+.+....+.+...++ .+..+.++..+.+..+.+.|++.+ .++ ++-|.-.. .+
T Consensus 231 --------~~~~G~~~~p~da~ll~rgl~-----Tl~~R~~~~~~nA~~lA~~L~~hp------~V~~V~yPgl~s-~p~ 290 (386)
T PF01053_consen 231 --------RRLLGATLSPFDAWLLLRGLR-----TLPLRMERQNENAEALAEFLEEHP------KVKRVYYPGLPS-HPQ 290 (386)
T ss_dssp --------HHHHT-B--HHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTST------TEEEEEETTSTT-STT
T ss_pred --------hhhcCccchHHHHHHHhcCCC-----cHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEEccccc-ccc
Confidence 111112233333333333333 356677888888899999998874 454 55552110 00
Q ss_pred --------CCCCceEEEEeeCC
Q 010538 394 --------HDTGSMVSFNLKRP 407 (508)
Q Consensus 394 --------~~~~~~v~~~~~~~ 407 (508)
..-+++++|.+++.
T Consensus 291 ~~~~~~~~~g~ggl~sf~l~~~ 312 (386)
T PF01053_consen 291 HELAKRQMSGGGGLLSFELKGG 312 (386)
T ss_dssp HHHHHHHCSSCTSEEEEEESSH
T ss_pred eeeeeecccccCceeEEEeccc
Confidence 01257999999874
No 277
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.71 E-value=2.1e-14 Score=148.91 Aligned_cols=331 Identities=12% Similarity=0.066 Sum_probs=196.0
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. +..+|.+++++.+.+. .... ..... ......++.+.+++..+. + .++|++++
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~-~~~~-~~~~~-----~~~~~~~la~~l~~~~~~--~--~~~~~~sG 95 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLD-DIWH-VSNLF-----TNSLQEEVASLLAENSAG--D--LVFFCNSG 95 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-hccc-ccccc-----CCHHHHHHHHHHHhcCCC--C--EEEEeCCc
Confidence 67788886443 4557888888766543 2111 11110 123344444555554432 4 69999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEec-ccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCC
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTM-ENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~-~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
++|+..++.... ..+++.|++.+ ..|.+...+..........-...|....... .--.|++.++ +
T Consensus 96 ~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~d~~~l~--~ 162 (377)
T PRK02936 96 AEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTH-----------VPFNDIKALK--E 162 (377)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceE-----------eCCCCHHHHH--H
Confidence 999998887532 23445566664 4554555444322100000001111110000 0001467777 5
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC--CCCCC-
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ--PPDLS- 262 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~--~~d~~- 262 (508)
.+ .+++++|++..+++++|...+ +++|.++|++ +|+++|+|++|. +|.. ++...
T Consensus 163 ~~------~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~------------~~~~lI~DEv~~g~g~~g~~~~~~~ 224 (377)
T PRK02936 163 VM------NEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKK------------FGALLIIDEVQTGIGRTGTLFAYEQ 224 (377)
T ss_pred hc------cCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEeccccCCCcCchhhHHHh
Confidence 44 456899999999998887753 6667777776 999999999986 2221 22211
Q ss_pred -CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHH
Q 010538 263 -KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASI 339 (508)
Q Consensus 263 -~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 339 (508)
....|++ +++|.++ + | +|+++.++++.+.+.+... ......+...+++.
T Consensus 225 ~~~~~di~--t~sK~l~-~-G~~ig~v~~~~~~~~~~~~~~~------------------------~~t~~~~~~~~aaa 276 (377)
T PRK02936 225 FGLDPDIV--TVAKGLG-N-GIPVGAMIGKKELGTAFGPGSH------------------------GSTFGGNPLAMAAA 276 (377)
T ss_pred hCCCCcEE--EEccccc-C-CCccEEEEEcHHHHhhccCCCC------------------------CCCCCCCHHHHHHH
Confidence 2235655 5779888 5 4 7999998887665543210 01112455667777
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHH
Q 010538 340 RHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEK 419 (508)
Q Consensus 340 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 419 (508)
.++++.+.. +...+++.++.+++++.|++... +.+.+..+.+ .+.++++.+++. ...+.+
T Consensus 277 ~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~v~~---------~g~~~~i~~~~~------~~~~~~ 336 (377)
T PRK02936 277 KEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELE--HLECVKNIRG---------KGLMIGIECTEE------VAPVIE 336 (377)
T ss_pred HHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh--hCCcEEeEee---------cceEEEEEecch------HHHHHH
Confidence 778876633 34456667777777777765310 0012221211 167888887642 234788
Q ss_pred HHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 420 LASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 420 ~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
.|.++||.+.++. .+.+|++++...|+++++++++.|.+.
T Consensus 337 ~l~~~gv~v~~~g---------------------------------------~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 337 QLREEGLLVLSAG---------------------------------------PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHCCeEEecCC---------------------------------------CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 8899999986531 468999999999999999999998765
No 278
>PRK15029 arginine decarboxylase; Provisional
Probab=99.71 E-value=2.1e-15 Score=165.53 Aligned_cols=239 Identities=10% Similarity=0.062 Sum_probs=171.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~ 162 (508)
...+.++.+.+|+.+|++.. ..+++|+|.++..++.+. .++|+.|++....|-|++..+.+ .|+++++++...
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t---~FlvNGST~gn~a~i~a~-~~~gd~Vlv~RN~HKSv~~al~L---~ga~Pvyl~P~~ 276 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRS---WSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSIEQGLIL---TGAKPVYMVPSR 276 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcE---EEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHH---cCCeEEEecccc
Confidence 34578899999999999865 788899999999999998 68999999999999999876655 499999996543
Q ss_pred c--cCccccccccccccccccchhhhhcCCCCCCCC----CCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 163 A--VDNDGLSESLVTSTKISLLPIQRRKGASFPERD----PAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 163 ~--~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~----~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
+ +-.-.+ +.=.++++.++ ++|+++. ....+++.++++++ |..|.+.+++.|.++||+
T Consensus 277 ~~~Gi~~~i-------~~~~~~~e~i~--~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~------- 339 (755)
T PRK15029 277 NRYGIIGPI-------YPQEMQPETLQ--KKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEK------- 339 (755)
T ss_pred cccCCccCC-------CccccCHHHHH--HHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHh-------
Confidence 1 111000 00012367777 6654321 11234458888885 668999999999999998
Q ss_pred CCCCCCCeEEEEeccccC--CC---CCC--CC-----CCCCCc-EEEEeccccccCCCcceEEEEech--hHh--hhccc
Q 010538 237 SPFSKGRWMVLIDAAKGC--VT---QPP--DL-----SKYPVD-FVVMSFYKIFGYPTGLGALIMRND--AAK--LLKNT 299 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~--g~---~~~--d~-----~~~~~D-~~~~S~~K~~g~P~G~G~l~~~~~--~~~--~l~~~ 299 (508)
+|++++||+||+. +. .|. .+ ...++| +++-|.||++++.+..+++.++.. .+. +++..
T Consensus 340 -----~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~ 414 (755)
T PRK15029 340 -----TSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQA 414 (755)
T ss_pred -----cCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHH
Confidence 8999999999875 11 111 11 125788 889999999887776788888554 111 11111
Q ss_pred cccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhccc
Q 010538 300 YFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLR 373 (508)
Q Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 373 (508)
-..+.+.+|+++-++++..|..++....-..+.++..+++..+++.+.+++
T Consensus 415 -----------------------l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 415 -----------------------YMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred -----------------------HHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 233456779999999999999988752235667778888888999987764
No 279
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.8e-14 Score=137.16 Aligned_cols=318 Identities=13% Similarity=0.095 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCC--CCC--CeEEEe-cccccchHHHHHHHHhcCCe-E
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPW--SHQ--SSYMYT-MENHNSVLGIREYALSQGAA-A 155 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~--~~g--~~vl~~-~~~h~s~~~~~~~~~~~G~~-v 155 (508)
...+++++...+.+-+|++-.+..|.+|+|+..+.--+...+.- ..| ..|+.+ +.+|-++... |.+ =
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~-------~l~~d 148 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADA-------GLEED 148 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccc-------ccCcc
Confidence 35567777788888888754433899999999998766665532 222 345544 5455443221 111 1
Q ss_pred EEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccc
Q 010538 156 FAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILE 235 (508)
Q Consensus 156 ~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~ 235 (508)
..|......++.. .-..++..|.+++. +++.|.+|+++-+.||||.++.-+++.++..
T Consensus 149 ~fVs~kP~iel~~-----~g~FKY~vDF~~l~----------i~e~~g~ic~SRPtNPTGNVlTdeE~~klda------- 206 (417)
T COG3977 149 LFVSAKPNIELLP-----AGQFKYHVDFEHLH----------IGESTGAICVSRPTNPTGNVLTDEELAKLDA------- 206 (417)
T ss_pred ceeeccCCccccc-----ccceeeccCHHHcc----------cccccceEEecCCCCCCCCcccHHHHHHHHH-------
Confidence 1122222111100 01245566777776 4678999999999999999999999999887
Q ss_pred cCCCCCCCeEEEEeccccCCCCCCCCCCC----C-CcEEEEeccccccCCCc-ceEEEEechhHhhhccccccCceEEec
Q 010538 236 ISPFSKGRWMVLIDAAKGCVTQPPDLSKY----P-VDFVVMSFYKIFGYPTG-LGALIMRNDAAKLLKNTYFSGGTVAAS 309 (508)
Q Consensus 236 ~~~~~~~g~~vivD~a~~~g~~~~d~~~~----~-~D~~~~S~~K~~g~P~G-~G~l~~~~~~~~~l~~~~~g~~~~~~~ 309 (508)
+|++||+++++|.+++++...+.+++. + --+.|+|.+|..- |+- ||+++++++.+..+...- + .++
T Consensus 207 --lA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GL-PG~R~GIiIane~viqaitnmn--~-iis-- 278 (417)
T COG3977 207 --LARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGL-PGSRCGIIIANEKVIQAITNMN--G-IIS-- 278 (417)
T ss_pred --HhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCC-CCcceeEEEccHHHHHHHHhcc--c-eee--
Confidence 788899999999999987766666544 2 2478999999555 732 999999999877655431 0 000
Q ss_pred ccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChH-----HHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q 010538 310 IADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVP-----AICRHIASLGMYVRKVLLSLRHENGADVCTIY 384 (508)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~-----~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~ 384 (508)
..+|.. +-+.+.+++.+..+. -|+--+++..+.....|++.- ....+.+.
T Consensus 279 ----------------Lap~~~------G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~l---p~~~~~iH 333 (417)
T COG3977 279 ----------------LAPGRM------GPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYL---PEYRCLIH 333 (417)
T ss_pred ----------------ecCCCc------cHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhc---Cccceeee
Confidence 111111 111122222222222 222233344444444443321 01246665
Q ss_pred cCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCc
Q 010538 385 GTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDN 464 (508)
Q Consensus 385 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 464 (508)
.|.+ .-++|+.+++.+ +....+.++|+++|+.+-+|+.+.++..+ ++. |
T Consensus 334 kpEG--------AIFlWLWf~dLP---Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~-----ewp---------H------ 382 (417)
T COG3977 334 KPEG--------AIFLWLWFKDLP---ITTEELYQRLKARGVLMVPGHYFFPGLDK-----EWP---------H------ 382 (417)
T ss_pred cCCc--------ceeehhhhccCC---CCHHHHHHHHHhCeEEEecccccCCCCCC-----CCC---------C------
Confidence 5544 577777777754 44567999999999999999998886532 111 1
Q ss_pred cccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 465 DIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 465 ~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.+.++|+|+.. +.++++.=++.+.+-|+
T Consensus 383 ------~hqC~Rmn~~~--~~~~ie~Gva~lae~ve 410 (417)
T COG3977 383 ------THQCMRMNYVP--EPEKIEKGVAILAEEVE 410 (417)
T ss_pred ------ccceEEEecCC--CHHHHHHHHHHHHHHHH
Confidence 36799999875 78888888888776554
No 280
>PLN02624 ornithine-delta-aminotransferase
Probab=99.70 E-value=1.6e-14 Score=153.77 Aligned_cols=336 Identities=13% Similarity=0.098 Sum_probs=202.9
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. |--+|.+++++.+++.. . ......+ ..+...++.+.++++++. + .+.|++++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~-~-~~~~~~~-----~~~~~~~la~~L~~~~~~--~--~~~f~~SG 141 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEK-L-TLSSRAF-----YNDKFPEFAEYLTSMFGY--D--MVLPMNTG 141 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHh-c-CCccccc-----CCHHHHHHHHHHHhhcCC--C--eEEEeCCh
Confidence 67889997432 33488999888765532 1 1111111 123445677778888763 4 68999999
Q ss_pred HHHHHHHHhhcCC--------CCCC-eEEEecc-cccchHHHHHHHHh----cC-----CeEEEEccCCccCcccccccc
Q 010538 113 TAALKLVGEAFPW--------SHQS-SYMYTME-NHNSVLGIREYALS----QG-----AAAFAIDVEEAVDNDGLSESL 173 (508)
Q Consensus 113 t~al~~~~~~l~~--------~~g~-~vl~~~~-~h~s~~~~~~~~~~----~G-----~~v~~v~~~~~~~~~~l~~~~ 173 (508)
++|+..++..... .++. .|+.... -|......+..... .+ ..+..+|.+
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------------ 209 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG------------ 209 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC------------
Confidence 9999887753321 1123 4555443 23222222221100 00 011222221
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
|++.++ +.++. ..+++++|++..+++++|.+.| +++|.++|++ ||+++|+|
T Consensus 210 --------d~~~l~--~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~------------~gillI~D 264 (474)
T PLN02624 210 --------DLDALE--KIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSK------------HNVLMIAD 264 (474)
T ss_pred --------CHHHHH--HHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEe
Confidence 345556 55532 2357899999999999999999 7788888887 99999999
Q ss_pred cccc-CCCC----CCCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQ----PPDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~----~~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
++|. +|.. ..+......|++++| |.+|+. -.+|+++++++++..+.+...+
T Consensus 265 Ev~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~~~~~~~~~--------------------- 321 (474)
T PLN02624 265 EIQTGLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVMLCIKPGEHG--------------------- 321 (474)
T ss_pred ccccCcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHhHhccCCcC---------------------
Confidence 9997 3321 122233457888865 977743 1379999988776555433111
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce-EEEecCCCCCcccCCCCceEEE
Q 010538 324 ELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV-CTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 324 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
...+.+....++..++++.+.+. .+.++..++.+++++.|+++.. ..+. +.-+.+ .+.++.+
T Consensus 322 ---~T~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~--~~~~~i~~vrg---------~G~~~~i 384 (474)
T PLN02624 322 ---STFGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQK--QFPKLIKEVRG---------RGLLNAV 384 (474)
T ss_pred ---CCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEEe---------eEEEEEE
Confidence 01123455666777788877653 4556777777888877766410 0011 211111 1556666
Q ss_pred EeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCC
Q 010538 403 NLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYM 482 (508)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 482 (508)
.+...........++.+.|.++||.+.++. .+.+||++++.
T Consensus 385 ~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~---------------------------------------~~~lR~~p~l~ 425 (474)
T PLN02624 385 VLNSPKLGPVSAYDVCLKLKERGLLAKPTH---------------------------------------DTIIRLAPPLS 425 (474)
T ss_pred EecCCCcChHHHHHHHHHHHhCCeEEecCC---------------------------------------CCEEEEECCcc
Confidence 664321000112357788899999987631 46899999999
Q ss_pred CCHHHHHHHHHhhhhhhhh
Q 010538 483 STFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 483 ~t~eev~~l~~~~~~~~~~ 501 (508)
+|++||+.+++.|.++++.
T Consensus 426 ~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 426 ISEDELQECSKALSDVLEH 444 (474)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988754
No 281
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=4.2e-15 Score=156.51 Aligned_cols=347 Identities=12% Similarity=0.083 Sum_probs=207.0
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .|--+|.+.+++.++. .... ....... ......++.+++++.+....+ .+.|++++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~-~~~~-~~~~~~~----~~~~~~~la~~l~~~~p~~~~--~v~f~~sG 111 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQL-DRLD-HVIFAGF----THEPAERLAQRLVALTPGGLD--HVFFSDSG 111 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHH-hhCC-Ccccccc----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 7888999743 3555788888876544 3211 1110000 123344566777777653345 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEecccccch-HHHHHHHHhcC---------CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTMENHNSV-LGIREYALSQG---------AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~~h~s~-~~~~~~~~~~G---------~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . .+..+||.....|.+. ..+........ ..+..+|.......
T Consensus 112 seA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--------- 182 (423)
T PRK05964 112 SVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYE--------- 182 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhH---------
Confidence 999988776431 1 2345677766555443 33332211000 01122222110000
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeC-CCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEec
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPS-ECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDA 250 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~-~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~ 250 (508)
..+++.++ +.+.+ ..+++..|++.. ++...|.+.+ +++|.++|++ ||+++|+|+
T Consensus 183 ----~~~~~~l~--~~l~~---~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~------------~g~llI~DE 241 (423)
T PRK05964 183 ----QATLDALE--ALLEK---HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR------------HGVLLIFDE 241 (423)
T ss_pred ----HHHHHHHH--HHHHh---CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH------------cCCEEEEec
Confidence 01255565 55532 135677777766 5788888875 5566666665 999999999
Q ss_pred ccc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccc
Q 010538 251 AKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEE 324 (508)
Q Consensus 251 a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (508)
+|. +|..- .+.....+|++++| |++++. ..+|+++.++++.+.+.+.. .+. .
T Consensus 242 v~tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~~~~i~~~~~~~~-~~~-------------------~ 299 (423)
T PRK05964 242 IATGFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLCTAEIFEAFYSDD-RAK-------------------A 299 (423)
T ss_pred hhhCCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEEEcHHHHHhhhcCC-ccc-------------------c
Confidence 985 33211 12222357887665 988744 24889999988876553210 000 0
Q ss_pred cccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 325 LFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 325 ~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
.+..+| .|..++++..++++.+.+ +.+.+++.++.+++++.|+++.. .+.+ .+.. ..+.++.+
T Consensus 300 ~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~---~~~i---~~vr------g~Gl~~~i 364 (423)
T PRK05964 300 FMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRD---LPGV---ADVR------VLGAIGAV 364 (423)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcc---CCCe---EEee------cccEEEEE
Confidence 011233 466677777778887765 34678889999999998887621 1222 1111 12677788
Q ss_pred EeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCC
Q 010538 403 NLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYM 482 (508)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 482 (508)
.+.+.+... ....+.+.|.++||.+.+. .+.+|+++++.
T Consensus 365 ~l~~~~~~~-~~~~l~~~l~~~Gv~v~~~----------------------------------------~~~lR~~p~l~ 403 (423)
T PRK05964 365 ELDRPVLER-DGPALRAFALERGVLLRPL----------------------------------------GNTIYLMPPYI 403 (423)
T ss_pred EeccCcchh-HHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEeCCcc
Confidence 885432100 1235788888999998652 35799999999
Q ss_pred CCHHHHHHHHHhhhhhhhh
Q 010538 483 STFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 483 ~t~eev~~l~~~~~~~~~~ 501 (508)
+|++|||++++++.+.++.
T Consensus 404 ~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 404 ITAEELDRITDAIVEVADE 422 (423)
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 9999999999999988754
No 282
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.69 E-value=4.7e-15 Score=147.91 Aligned_cols=317 Identities=15% Similarity=0.116 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHcC----CCC-CCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 86 VRAAREQVLDYFN----ASM-KDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 86 ~~~~r~~la~~~~----~~~-~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
...+...+.++.+ .++ ++-+|++|+|.|.|+..+++.+ ...|+.|++....+++.+ ..++..|++++.|++
T Consensus 102 ~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~-~N~gd~vlie~~ty~~AL---~s~~a~gv~~ipv~m 177 (472)
T KOG0634|consen 102 IPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL-INRGDHVLIEEYTYPSAL---QSMEALGVKIIPVKM 177 (472)
T ss_pred cHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh-hcCCCceEEecccchHHH---HhccccCceEEeccc
Confidence 4444555555444 332 2236999999999999999999 677899998876666554 445556999999999
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCCCCC---CCCce-EEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPA---GDAYN-LFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~---~~~t~-lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
+.++.. ++.++ +.+.+...- .++++ +.+++..+||||..++.+.-.++.+
T Consensus 178 d~~Gi~----------------pE~l~--~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~-------- 231 (472)
T KOG0634|consen 178 DQDGID----------------PESLE--EILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQ-------- 231 (472)
T ss_pred cCCCCC----------------HHHHH--HHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHH--------
Confidence 877754 66666 444332221 24444 5578999999999999987776666
Q ss_pred CCCCCCCeEEEEeccccCCCCC-----------------------CCCCCCCCc---EEEEeccccccCCCc--ceEEEE
Q 010538 237 SPFSKGRWMVLIDAAKGCVTQP-----------------------PDLSKYPVD---FVVMSFYKIFGYPTG--LGALIM 288 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~g~~~-----------------------~d~~~~~~D---~~~~S~~K~~g~P~G--~G~l~~ 288 (508)
||++|+++||.|..+.+-..+ .++..++.| +=..|++|.++ | | +||+-+
T Consensus 232 -LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-P-GlRlG~it~ 308 (472)
T KOG0634|consen 232 -LARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-P-GLRLGWITG 308 (472)
T ss_pred -HHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-C-cceeEEeec
Confidence 666799999999987641111 112222333 44569999999 9 5 899999
Q ss_pred echhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcC----hHHHHHHHHHHHHH
Q 010538 289 RNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLT----VPAICRHIASLGMY 364 (508)
Q Consensus 289 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g----~~~i~~~~~~l~~~ 364 (508)
++.++++.-.. ... . ..+ |+.....-+.+.++.+.+.| +..++..+...++.
T Consensus 309 ~~~~l~ril~~---ae~-~-------------------t~~-pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~ 364 (472)
T KOG0634|consen 309 NSLFLKRILDL---AEV-A-------------------TSG-PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNA 364 (472)
T ss_pred CHHHHHHHhhh---cce-e-------------------ecC-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98876543221 111 0 001 22222222333333333322 45666777777888
Q ss_pred HHHHHhcccCCCCCce-EEEecCCCCCcccCCCCceEEEEeeCCC---CCccC--HHHHHHHHhhCCCeeccCCCCCchH
Q 010538 365 VRKVLLSLRHENGADV-CTIYGTYTSEVSYHDTGSMVSFNLKRPD---GSWFG--YREVEKLASLSGIQLRTGCFCNPGA 438 (508)
Q Consensus 365 l~~~L~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~--~~~l~~~L~~~gI~v~~g~~~~~~~ 438 (508)
+...|.+.. +.. +++..|.+ +.++|++++-.. ...++ ...+...+.++||.+.+|..+....
T Consensus 365 ~l~Al~kyl----p~~~~~~~~P~a--------GmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p 432 (472)
T KOG0634|consen 365 LLSALDKYL----PKSVCEYHPPKA--------GMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDP 432 (472)
T ss_pred HHHHHHHhC----CCCeeEEecCCc--------ceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcC
Confidence 888886642 123 45554443 899999996110 01122 1346677789999999997655421
Q ss_pred HHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 439 CAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 439 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
. . ....-.+|+|++++. .|++++.++++...++
T Consensus 433 ~----------------------~------s~~kiffRls~a~a~-~e~l~~g~~rf~~~ik 465 (472)
T KOG0634|consen 433 E----------------------S------SWSKIFFRLSIAFAE-PEKLDEGIERFGSVIK 465 (472)
T ss_pred c----------------------c------CCCcceEEEEeecCC-HHHHHHHHHHHHHHHH
Confidence 0 0 001248999999654 4477776666655443
No 283
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.4e-14 Score=142.11 Aligned_cols=162 Identities=12% Similarity=0.050 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~ 164 (508)
...+++++|.+=|.-.. +.++++..|+..++..+ .++||+|+.+..-|.+...... .+++.|+++++|+.+
T Consensus 64 ~~vlE~RiAaLEGG~aa----~a~aSG~AA~~~ai~~l-a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~--- 135 (426)
T COG2873 64 TDVLEERIAALEGGVAA----LAVASGQAAITYAILNL-AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD--- 135 (426)
T ss_pred HHHHHHHHHHhhcchhh----hhhccchHHHHHHHHHh-ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC---
Confidence 45567889988887655 55677888999999998 7899999999888877666655 458899999999764
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
|++.++ ++ ++++||+|++....||.+.+.|++.|.++||+ +|+
T Consensus 136 -----------------d~~~~~--~a------I~~nTkavf~EtigNP~~~v~Die~ia~iAh~------------~gv 178 (426)
T COG2873 136 -----------------DPENFE--AA------IDENTKAVFAETIGNPGLDVLDIEAIAEIAHR------------HGV 178 (426)
T ss_pred -----------------CHHHHH--HH------hCcccceEEEEeccCCCccccCHHHHHHHHHH------------cCC
Confidence 467778 44 47899999999999999999999999999998 999
Q ss_pred EEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHh
Q 010538 245 MVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAK 294 (508)
Q Consensus 245 ~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~ 294 (508)
+++||.+-+.+.. +..-+.++|+++-|..||.||- | +|.+++.....+
T Consensus 179 pliVDNT~atpyl-~rP~~hGADIVvHS~TK~igGh-Gt~iGG~iVD~G~FD 228 (426)
T COG2873 179 PLIVDNTFATPYL-CRPIEHGADIVVHSATKYIGGH-GTAIGGVIVDGGKFD 228 (426)
T ss_pred cEEEecCCCccee-cchhhcCCCEEEEeecccccCC-ccccceEEEeCCccc
Confidence 9999998876543 2222347999999999999944 4 788887655443
No 284
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.4e-14 Score=147.89 Aligned_cols=315 Identities=13% Similarity=0.045 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~ 164 (508)
...+.+.++.+-|.+.. +.++++..|+..++.++ +++||+|+++..-|.+...... .+++.|+++..++.....
T Consensus 65 ~~~lE~~~a~LEg~~~~----~afsSGmaAI~~~~l~l-l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~ 139 (396)
T COG0626 65 RDALEEALAELEGGEDA----FAFSSGMAAISTALLAL-LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDE 139 (396)
T ss_pred HHHHHHHHHHhhCCCcE----EEecCcHHHHHHHHHHh-cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChH
Confidence 45667888888877644 55666677999988888 7889999999887777666654 567789999988754322
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
.++ +++ ..++|++|++..+.||+-.+.|+++|.+++|+ +|+
T Consensus 140 --------------------~~~--~~~-----~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~------------~g~ 180 (396)
T COG0626 140 --------------------ALE--AAI-----KEPNTKLVFLETPSNPLLEVPDIPAIARLAKA------------YGA 180 (396)
T ss_pred --------------------HHH--HHh-----cccCceEEEEeCCCCcccccccHHHHHHHHHh------------cCC
Confidence 223 222 12689999999999999999999999999998 899
Q ss_pred EEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhc-cccccCceEEecccchhhhhhccC
Q 010538 245 MVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLK-NTYFSGGTVAASIADIDFVKRRQG 321 (508)
Q Consensus 245 ~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~ 321 (508)
+++||.+.+-+..-- .-+.|+|+++-|..|.++|-.- .|++..+++.+.... ..
T Consensus 181 ~vvVDNTfatP~~q~-PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~---------------------- 237 (396)
T COG0626 181 LVVVDNTFATPVLQR-PLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA---------------------- 237 (396)
T ss_pred EEEEECCcccccccC-hhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH----------------------
Confidence 999999987654322 2234799999999999884322 464554555543211 11
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCC---------Cc
Q 010538 322 VEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTS---------EV 391 (508)
Q Consensus 322 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~---------~~ 391 (508)
.++...+.+.....+.+...++. +..+.++..+.+..+.+.|++.+ .+ +++-|.-+ +.
T Consensus 238 -~~~~~G~~l~p~dA~l~lRGlkT-----L~~Rm~~~~~nA~~IA~~L~~~p------~V~~V~yPgl~shp~he~~~rq 305 (396)
T COG0626 238 -QRANTGAVLSPFDAWLLLRGLRT-----LALRMERHNENALKIAEFLADHP------KVKKVYYPGLPSHPGHELAKRQ 305 (396)
T ss_pred -HHhhcCCCCCHHHHHHHHhccch-----HHHHHHHHHHHHHHHHHHHhcCC------CeEEEECCCCCCCCcHHHHHHh
Confidence 11111223333334444445444 34455666666777777777753 34 45555310 00
Q ss_pred ccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCC
Q 010538 392 SYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKP 471 (508)
Q Consensus 392 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 471 (508)
- ...+++++|.+.+. +. ..++.+.|+-..+..+.|..-+.-. +++ ...|+.+ ..+.+.--+..
T Consensus 306 ~-~g~gg~~Sf~l~~~--~~--~~~f~~~L~l~~~a~SlGgveSLi~-~pa-~~th~~~----------~~~~r~~~Gi~ 368 (396)
T COG0626 306 M-TGYGGLFSFELKNE--EA--AKKFLDSLKLFKLAESLGGVESLIS-HPA-TMTHASI----------PLEERAKAGIT 368 (396)
T ss_pred c-CCCceEEEEEeCCh--HH--HHHHHHhCCccEEeccCCCcccccc-ccc-ccCcccC----------CHhHHHhcCCC
Confidence 0 01389999999874 11 1224444444444445543211110 000 0011111 11111112234
Q ss_pred CceEEEecCCCCCHHHHHHHHHhhh
Q 010538 472 TGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 472 ~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
++.||+|++.-+.++=++-+-++++
T Consensus 369 ~~LvRlSVGlEd~eDLi~Dl~~Al~ 393 (396)
T COG0626 369 DGLVRLSVGLEDVEDLIADLEQALA 393 (396)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 8999999998555554444444443
No 285
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.68 E-value=4.3e-14 Score=146.56 Aligned_cols=330 Identities=12% Similarity=0.093 Sum_probs=195.0
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. +. +|.+++++.+.+ .....++.. .....++.+++.+...+.. .++|++|+
T Consensus 27 dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~-~~~~~~~~~----------~~~~~~~~la~~l~~~~~~-~~~~~~SG 93 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGF-HPQVQQALQKQA-GLIWHSPNL----------YLNSLQEEVAQKLIGDKDY-LAFFCNSG 93 (375)
T ss_pred CCCEEEECCCCcccccCCC-CHHHHHHHHHHH-HhcCcccCc----------cCCHHHHHHHHHHhcCcCC-EEEEcCcc
Confidence 67778888653 55 788888876654 322222211 1233456666655443331 46899999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEe-cccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCC
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYT-MENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~-~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
|+|+..++.... ..++..|++. ...|.+........ |.....-+... .+..+ ....-.|++.++ +
T Consensus 94 seA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~---~~~~~~~~~~~--~~~~~------~~~~~~dl~~l~--~ 160 (375)
T PRK04260 94 AEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSAT---GQDKIKDGFGD--GVPHF------SYAIFNDLNSVK--A 160 (375)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhcc---CCcccCCCCCC--CCCCe------EEeCCCCHHHHH--H
Confidence 999997776642 2345566665 55576665554332 11100000000 00000 000001567777 5
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC--CCC--C
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ--PPD--L 261 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~--~~d--~ 261 (508)
.+ .+++.+|++..+++++|.+.+ ++++.++|++ +|+++++|++|. +|.. +.. .
T Consensus 161 ~l------~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~------------~~~~~i~De~~~g~g~~g~~~~~~~ 222 (375)
T PRK04260 161 LV------NKNTAAVMLELVQGESGVLPADKDFVKALADYCQE------------TGILLIVDEVQTGMGRTGKLYAFEH 222 (375)
T ss_pred hc------CCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEechhhCCCcccchhhhHh
Confidence 44 346789999999999999877 6888888887 999999999985 2221 111 2
Q ss_pred CCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHH
Q 010538 262 SKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIR 340 (508)
Q Consensus 262 ~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~ 340 (508)
.....|++ |++|.++ |+ -+|++++++++.+.+...... ...+.+....++..
T Consensus 223 ~~~~pdi~--t~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~~------------------------~t~~~~~~~~~aa~ 275 (375)
T PRK04260 223 YGIEPDIF--TLAKGLA-NGVPVGAMLAKSSLGGAFGYGSHG------------------------STFGGNKLSMAAAS 275 (375)
T ss_pred hCCCCCEE--Eeccccc-CCcceEEEEEcHHHHhhcCCCCCC------------------------CCCCcCHHHHHHHH
Confidence 22346755 6789888 52 189999998876554422100 01122344455555
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHH
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKL 420 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 420 (508)
++++.+.. +.+.++.++..+++++.+.++... .+.+..+.. .+.++++.+.. + ...+.+.
T Consensus 276 a~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~---------~g~~~~~~~~~-~-----~~~~~~~ 335 (375)
T PRK04260 276 ATLDIMLT---AGFLEQALENGNYLQEQLQKALQD--KETVTTVRG---------LGYMIGIETTA-D-----LSQLVEA 335 (375)
T ss_pred HHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhh--CCCeeEEec---------cceEEEEEecC-c-----HHHHHHH
Confidence 66665543 345556666666666666543110 011221111 27888888732 1 2347889
Q ss_pred HhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 421 ASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 421 L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
+.++||.+.+. ..+.+|++++...|.+|++++++.+++.
T Consensus 336 l~~~Gi~v~~~---------------------------------------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 336 ARDKGLIVLTA---------------------------------------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHhCCCEEecC---------------------------------------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 99999998652 1467999999999999999999998764
No 286
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.67 E-value=1.2e-16 Score=165.28 Aligned_cols=408 Identities=31% Similarity=0.416 Sum_probs=286.4
Q ss_pred HHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc
Q 010538 30 RATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT 109 (508)
Q Consensus 30 r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t 109 (508)
|+.+|-.+ . |+|+++.+.+.+...+............||++....+....+.+.++|-.+..+++..+.+|+++||
T Consensus 14 r~~e~s~~-~---yldhag~tl~sesq~~g~~~~sq~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp 89 (728)
T KOG2142|consen 14 RDREFSRL-A---YLDHAGRTLFSESQLEGVAFQSQSSENANPHSHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLP 89 (728)
T ss_pred hhHHHHHH-H---HHHhhhhhhhhhcccchhhhhhhccccCCCcccccchHHHHHHHHHHHHHHHHHhccccccccchhH
Confidence 44488876 2 9999999998888777644333334456788766667778889999999999999998888999999
Q ss_pred CChHHHHHHHHhhcCCCC-CCeE---EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhh
Q 010538 110 SGATAALKLVGEAFPWSH-QSSY---MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 110 ~g~t~al~~~~~~l~~~~-g~~v---l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
. .|+|+.+++.++++-. +..| =.+...|.+...........|+-+..+ .. ...+.+- +. .++..
T Consensus 90 ~-~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy-~q-~~~i~~~-----~~----~sls~ 157 (728)
T KOG2142|consen 90 A-LTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSY-SQ-TNEISDS-----EE----FSLSE 157 (728)
T ss_pred H-HHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEe-ee-eeecccc-----cc----ccccc
Confidence 9 9999999999997532 3333 223333333332111111223333333 00 0111000 00 00111
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCC
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYP 265 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~ 265 (508)
.. +......++..+...|..|..+-...+-.+.- ..+.++++|++.-..+-|++.....
T Consensus 158 ~~---------~~ls~~~L~~g~a~~nfeg~kik~ri~d~L~i------------pe~~y~lldtaSrvSaf~Ldaesy~ 216 (728)
T KOG2142|consen 158 SE---------ANLSEHSLFGGAAQSNFEGDKIKLRIMDRLNI------------PESEYVLLDTASRVSAFPLDAESYP 216 (728)
T ss_pred cc---------cCcccchhcccchhcccccceeeeeeeccccc------------CCceEEEEEeecccccccchHhhCC
Confidence 11 11234477777888888888744433333331 2589999999999999999999999
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNL 345 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 345 (508)
.|+... ++|+|+.|. |.+.+.++..+.. |+++.+....-..++.......++++.|+.++-.++.+...+..
T Consensus 217 f~~~~~-lltiFgyet--gAvlv~~r~A~~~-----Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~ 288 (728)
T KOG2142|consen 217 FDFNPK-LLTIFGYET--GAVLVMNRSAELK-----GGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPT 288 (728)
T ss_pred Ccccch-heeecCCCc--hhhHHHhhhhHhh-----cCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccch
Confidence 999999 999999997 5555555544322 55554433333334444556688999999999888887777776
Q ss_pred HHhc--ChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhh
Q 010538 346 INSL--TVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASL 423 (508)
Q Consensus 346 ~~~~--g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~ 423 (508)
+... ++..+..+...+.+++.-.|.+..+ |++.+++++...-+ |...++++.|.+...++..+....+.+.. -
T Consensus 289 ~sRvtG~~ysy~wmt~al~~~whvlLda~~l--G~kdmd~yglS~f~--Pdfqg~sf~fv~g~d~psgfGcl~VkKs~-i 363 (728)
T KOG2142|consen 289 QSRVTGGMYSYSWMTLALANNWHVLLDALAL--GPKDMDSYGLSLFQ--PDFQGPSFYFVFGRDDPSGFGCLEVKKSA-I 363 (728)
T ss_pred HhhhcccchhHHHHHHHHhhhHHHHHhhhcc--CcchHhhhhhhccC--ccceeeeEEEEeccCCCCceeeeeeehhh-h
Confidence 5543 6899999999999999999988754 67777777655432 45678999999987666666665566655 6
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.||..++|++|+.+.++.++|+..++.-..+..+|.|+|-+ + .. +| ++..|.+++..+..++.+
T Consensus 364 ~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~d----g--~~---~s-~~~~~~~~~~a~~~~~v~ 427 (728)
T KOG2142|consen 364 SGLELRTGCFCNIGACKIYPGLYLEMSQKGLSAGKGCGDND----G--QP---VS-GYMQTPADVGAYLSAQVS 427 (728)
T ss_pred hceeccCCCCCCCcceeecccccHHHHHHHhhhccccccCC----C--Cc---cc-ccccchhhhhHHHHHhhh
Confidence 89999999999999999999999999999999999999862 1 22 77 899999999999887664
No 287
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.67 E-value=5.7e-15 Score=160.55 Aligned_cols=253 Identities=15% Similarity=0.111 Sum_probs=171.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHH-HHHHHhcCCeEEEEccC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGI-REYALSQGAAAFAIDVE 161 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~v~~v~~~ 161 (508)
.....++.+.+|+.+|++.. ..+++|+|.++..++.++ ..+|+.||+....|-|+... +.+ .|+++++++..
T Consensus 173 eG~i~eAq~~AA~~fgAd~t---yFlvNGTS~gn~a~i~a~-~~~Gd~VLvdRN~HKSv~hgaLiL---sGa~PVYl~P~ 245 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKT---YFVLNGTSASNKVVTNAL-LTPGDLVLFDRNNHKSNHHGALIQ---AGATPVYLETA 245 (720)
T ss_pred ChHHHHHHHHHHHHhCCCce---EEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHHH---cCCeEEEeecc
Confidence 34578899999999999865 788899999999999998 68999999999999998764 444 49999998754
Q ss_pred Cc--cCccccccccccccccccchhhhhcCCCCCCCCC----CCCCceEEEEeCCCCCCccccCHHHHHHH-HcCCcccc
Q 010538 162 EA--VDNDGLSESLVTSTKISLLPIQRRKGASFPERDP----AGDAYNLFAFPSECNFSGSRFNLDLINIM-KKNPERIL 234 (508)
Q Consensus 162 ~~--~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~----~~~~t~lv~~~~~~n~tG~~~~i~~i~~l-~~~~~~~~ 234 (508)
.+ +-+-. ++.=.++.+.++ ++|++..+ ..+..++++++++ |..|.+.+++.|.++ +|.
T Consensus 246 ~n~~Gi~g~-------I~~~~~~~~~i~--~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~----- 310 (720)
T PRK13578 246 RNPFGFIGG-------IDAHCFDEEYLR--EQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHL----- 310 (720)
T ss_pred ccccCCcCC-------CChHHccHHHHH--HHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhcc-----
Confidence 31 11110 111112345566 55543211 1122588888874 678999999999998 575
Q ss_pred ccCCCCCCCeEEEEeccccC--CCCCC--CC----CCCCCc----EEEEeccccccCCCcceEEEEechhHhhhcccccc
Q 010538 235 EISPFSKGRWMVLIDAAKGC--VTQPP--DL----SKYPVD----FVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFS 302 (508)
Q Consensus 235 ~~~~~~~~g~~vivD~a~~~--g~~~~--d~----~~~~~D----~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g 302 (508)
++ ++++|.||+. +..|. ++ -+.++| +++-|.||++++.+..+++.+++..++.-+..+ .
T Consensus 311 -------~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v-~ 381 (720)
T PRK13578 311 -------CD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYC-P 381 (720)
T ss_pred -------CC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccC-C
Confidence 67 9999999874 22231 11 244788 999999999887766788887665432000000 0
Q ss_pred CceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH-hcccCCCCCceE
Q 010538 303 GGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVL-LSLRHENGADVC 381 (508)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L-~~l~~~~~~~~~ 381 (508)
...+. ..-..+.+.+|+++-++++..+..++....-+.+.+++.+++..+++.+ +.. +++
T Consensus 382 ---------~~r~~----~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~------~~~ 442 (720)
T PRK13578 382 ---------HKRLN----NAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARC------KLI 442 (720)
T ss_pred ---------HHHHH----HHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhC------CCe
Confidence 00000 0022344567889999999998888775334667788888888999988 555 356
Q ss_pred EEec
Q 010538 382 TIYG 385 (508)
Q Consensus 382 ~~~~ 385 (508)
+++.
T Consensus 443 ~~~~ 446 (720)
T PRK13578 443 RPFI 446 (720)
T ss_pred eecc
Confidence 6664
No 288
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.67 E-value=3.3e-15 Score=150.38 Aligned_cols=274 Identities=13% Similarity=0.057 Sum_probs=199.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCC---C-C---CCeEEEecccccchHHHHHHHHhcCCe
Q 010538 82 TCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPW---S-H---QSSYMYTMENHNSVLGIREYALSQGAA 154 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~---~-~---g~~vl~~~~~h~s~~~~~~~~~~~G~~ 154 (508)
...+..++...++.+++.+++. .-..|.|+|+++.+....... + . ..+++++..-|. .|.++++.++++
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~-~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~---a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDS-CGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHA---AFEKAARYFEVE 193 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccc-cCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHH---HHHHHHhhEEEE
Confidence 4566778999999999998762 235678888885554433211 1 1 134555553333 345566678999
Q ss_pred EEEEccCC-ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccc
Q 010538 155 AFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERI 233 (508)
Q Consensus 155 v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~ 233 (508)
++.||++. +..+ |+..+. . .++++|.+++.+.+++|+|.+-|++++.++.-+
T Consensus 194 l~~V~~~~~~~~~---------------D~~k~~--~------~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e---- 246 (491)
T KOG1383|consen 194 LREVPLDEGDYRV---------------DPGKVV--R------MIDENTIMLVGSLPNFPTGEIEDVEKLADLLLE---- 246 (491)
T ss_pred EEeeeccccceEe---------------cHHHHH--H------HhccceEEEEEEcCCCCccchhhHHHHHHHHHH----
Confidence 99999984 4455 688888 4 446789999999999999999999999999886
Q ss_pred cccCCCCCCCeEEEEeccccCCCC--------CCCCCCCCCcEEEEeccc-cccCCCcceEEEEechhHhhh----cccc
Q 010538 234 LEISPFSKGRWMVLIDAAKGCVTQ--------PPDLSKYPVDFVVMSFYK-IFGYPTGLGALIMRNDAAKLL----KNTY 300 (508)
Q Consensus 234 ~~~~~~~~~g~~vivD~a~~~g~~--------~~d~~~~~~D~~~~S~~K-~~g~P~G~G~l~~~~~~~~~l----~~~~ 300 (508)
.+++++++|++.+.-.. ++|+...++..+.+++|| .|. |.|+|+++.+++-...- ..-+
T Consensus 247 -------~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~-~~G~~~vl~r~k~~~~~q~~~~~~w 318 (491)
T KOG1383|consen 247 -------IWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLA-PAGSSWVLYRNKELLPHQLFFHTDW 318 (491)
T ss_pred -------HhCCceeecccCccccccccccCccccccCCCCceeEeeccceeeee-ecCcEEEEEcccccccceEEEeccc
Confidence 28999999999764333 567777788899999999 555 99999988876543111 1222
Q ss_pred ccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce
Q 010538 301 FSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV 380 (508)
Q Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~ 380 (508)
.||-. +...-.|+.+...++++++++-.+...|+.+..+++.+.+..|+++++++. +
T Consensus 319 ~Gg~y-----------------~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~------~ 375 (491)
T KOG1383|consen 319 LGGIY-----------------ASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIK------G 375 (491)
T ss_pred cCccc-----------------cCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccc------c
Confidence 33321 222234666677889999998888899999999999999999999999984 7
Q ss_pred EEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeecc
Q 010538 381 CTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRT 430 (508)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 430 (508)
+.+++++. ++|...+... ++..++...|++.|..+-.
T Consensus 376 i~i~gkp~-----------vs~~~~~s~~--~~i~elsd~l~~~GW~lna 412 (491)
T KOG1383|consen 376 IKIVGKPL-----------VSFILFGSND--VNIFELSDLLRKKGWILNA 412 (491)
T ss_pred ceecCCCc-----------EEEEEccCCc--cchhhhhHHHHhcCcCccc
Confidence 99998643 4444433222 4556799999999998754
No 289
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.67 E-value=6e-14 Score=144.85 Aligned_cols=354 Identities=14% Similarity=0.108 Sum_probs=210.4
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.+-+|+|--+-+.. .....+.+.... .++. .|.. ..-+.+.++.+++++|.+ .+++|+++|.|+++
T Consensus 36 ~~~v~iDLltDsgT-~aMs~~q~a~~~---~GDe--~yag----~~s~~~lE~~va~~~G~~----~av~v~sGT~Al~l 101 (450)
T TIGR02618 36 SEDVYIDLLTDSGT-NAMSDKQWAGLM---MGDE--AYAG----SRNFYHLERTVRELYGFK----YVVPTHQGRGAENL 101 (450)
T ss_pred cCceEEEcccCCCc-HHHHHHHHHHhh---hcch--hhcC----CCcHHHHHHHHHHHHCCC----eEEEcCCHHHHHHH
Confidence 67889988765543 222222122221 1111 1111 222567789999999987 47999999999998
Q ss_pred HHhhcCCCCCCeEEEecccccchHHHHHH-HHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTMENHNSVLGIREY-ALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDP 197 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~~~h~s~~~~~~~-~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~ 197 (508)
+. .+..++|++| +...| ...... .+..|+.+.-++.+...+.. +.-+..-..|+++++ ++|.+.
T Consensus 102 l~-~l~l~pGDeV--psn~~---f~Tt~ahIe~~Gav~vDi~~dea~~~~-----~~~p~~GniD~~~Le--~aI~~~-- 166 (450)
T TIGR02618 102 LS-QIAIKPGDYV--PGNMY---FTTTRYHQEKNGATFVDIIIDEAHDAQ-----LNIPFKGNVDLKKLQ--KLIDEV-- 166 (450)
T ss_pred HH-HhCCCCcCEE--CCcee---HHHHHHHHHhCCeEEEeeecccccccc-----cCCCCCCCcCHHHHH--HHhccc--
Confidence 75 4447889977 33223 222222 35567766666443100000 000111233799999 777532
Q ss_pred CCCCceEEEEeCCCCCC-ccccCH---HHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC-----------CCCCCC
Q 010538 198 AGDAYNLFAFPSECNFS-GSRFNL---DLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT-----------QPPDLS 262 (508)
Q Consensus 198 ~~~~t~lv~~~~~~n~t-G~~~~i---~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~-----------~~~d~~ 262 (508)
..+++++|.+...+|.. |..+|+ +++.++|++ +|++||.|+++.++- ...++.
T Consensus 167 ~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~------------~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ 234 (450)
T TIGR02618 167 GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEA------------HGIKVFYDATRCVENAYFIKEREQGYEDKSIA 234 (450)
T ss_pred cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHH------------cCCEEEEEccchhhChhhhhcccccccCCCHH
Confidence 12345667666666655 898765 566666665 999999999998742 223331
Q ss_pred ----C--CCCcEEEEeccccccCCCcceEEEEe-chhHhhhccc--cccCceEEecccchhhhhhccCccccccCCCCCh
Q 010538 263 ----K--YPVDFVVMSFYKIFGYPTGLGALIMR-NDAAKLLKNT--YFSGGTVAASIADIDFVKRRQGVEELFEDGTASF 333 (508)
Q Consensus 263 ----~--~~~D~~~~S~~K~~g~P~G~G~l~~~-~~~~~~l~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 333 (508)
+ ..+|.+++|++|.+++|.| |++..+ +++.++++.. .++|. ...|....
T Consensus 235 ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~eG~---------------------~tyGgla~ 292 (450)
T TIGR02618 235 EILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVFEGM---------------------PSYGGLAG 292 (450)
T ss_pred HHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhcCCc---------------------cccCchhh
Confidence 1 1589999999998887877 777754 5566665544 22221 12244444
Q ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEe----eCCCC
Q 010538 334 LSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNL----KRPDG 409 (508)
Q Consensus 334 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~ 409 (508)
..+.++..+++..-+ ....++....+++|.+.|.+. |+.++.|.+ ++.|.++. ++.+.
T Consensus 293 r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~-------Gvpv~~p~g--------gh~V~vda~~~lph~~~ 354 (450)
T TIGR02618 293 RDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAA-------GVPIVEPVG--------GHAVFLDARRFLPHIPQ 354 (450)
T ss_pred hhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHC-------CCcccCCCC--------cceEEEEhHHhCCCCCh
Confidence 456666666664332 244566666799999999887 788876654 78888874 45555
Q ss_pred CccCHHHHHHHH-hhCCCeec-cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCC--C--CceEEEecC-CC
Q 010538 410 SWFGYREVEKLA-SLSGIQLR-TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGK--P--TGAIRVSFG-YM 482 (508)
Q Consensus 410 ~~~~~~~l~~~L-~~~gI~v~-~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~--~~~iRis~~-~~ 482 (508)
.++....+...| .+.||.-. -|+...... + .+++ . -..+|+++. --
T Consensus 355 ~~~p~~al~~~ly~~~gir~~e~g~~~~~~~------------------------~---~~~~~~~~~~el~rlaiprr~ 407 (450)
T TIGR02618 355 DQFPAQSLAASIYVETGVRSMERGIVSAGRN------------------------N---VTGEHHRPKLELVRLTIPRRV 407 (450)
T ss_pred hhChHHHHHHHHHHHhCccEEeecceecccC------------------------C---CCCcccCCccceeeecccccc
Confidence 555555555444 67788743 232211110 0 0111 1 257999977 33
Q ss_pred CCHHHHHHHHHhhhhhhh
Q 010538 483 STFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 483 ~t~eev~~l~~~~~~~~~ 500 (508)
-|.+.+|.+++.+..+.+
T Consensus 408 yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 408 YTYAHMDVVADGIIKLYK 425 (450)
T ss_pred ccHhHHHHHHHHHHHHHh
Confidence 488999999999887754
No 290
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=8.8e-14 Score=145.63 Aligned_cols=327 Identities=13% Similarity=0.103 Sum_probs=196.9
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .|.-+|.+.+++.+.+. .... .... . ......++.++++++.+. + .+.|++++
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~-~~~~-~~~~--~---~~~~~~~l~~~l~~~~~~--~--~~~~~~sG 106 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGE-KLWH-ISNV--F---TNEPALRLAKKLIDATFA--E--RVFFANSG 106 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHH-hcCc-ccCc--c---CCHHHHHHHHHHHhhCCC--C--EEEEeCch
Confidence 6778888754 45568888888766543 2111 1111 1 112234677778887653 4 68999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEe-cccccchHHHHHHHHh----cC-----CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYT-MENHNSVLGIREYALS----QG-----AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~-~~~h~s~~~~~~~~~~----~G-----~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . .....|+.. ..-|.+...+...... .| ..+..+|.
T Consensus 107 seA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 171 (403)
T PRK05093 107 AEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF--------------- 171 (403)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC---------------
Confidence 999988876431 1 123445544 4456555443332100 00 11112221
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc--C---HHHHHHHHcCCccccccCCCCCCCeEEEEec
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF--N---LDLINIMKKNPERILEISPFSKGRWMVLIDA 250 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~--~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~ 250 (508)
.|++.++ +.+ .+++++|++..+ +++|.+. | +++|.++|++ ||+++|+|+
T Consensus 172 -----~d~~~l~--~~l------~~~~aaiiiep~-~~~gg~~~~~~~~l~~l~~l~~~------------~g~~lI~DE 225 (403)
T PRK05093 172 -----NDLAAVK--AVI------DDHTCAVVVEPI-QGEGGVIPATPEFLQGLRELCDQ------------HNALLIFDE 225 (403)
T ss_pred -----CCHHHHH--HHh------cCCeEEEEEecc-cCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEec
Confidence 1466777 444 356888988854 5555443 3 5666666665 999999999
Q ss_pred ccc-CCCC--CC--CCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 251 AKG-CVTQ--PP--DLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 251 a~~-~g~~--~~--d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
+|+ +|.. +. .......|+. |++|.++ | | +|++++++++.+.+.+...+
T Consensus 226 v~~g~g~~g~~~~~~~~~~~pdi~--s~sK~l~-~-G~rig~vv~~~~i~~~l~~~~~~--------------------- 280 (403)
T PRK05093 226 VQTGMGRTGDLFAYMHYGVTPDIL--TSAKALG-G-GFPIGAMLTTAEIASHFKVGTHG--------------------- 280 (403)
T ss_pred hhhCCCCCccchhhhhcCCCCCEE--Eeccccc-C-CcceEEEEEcHHHHhhcCCCCCC---------------------
Confidence 987 2221 11 1222346654 6679888 6 6 89999999887766543111
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 324 ELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 324 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
... ..+.+..++..++++.+.. .+..++++++.+++.+.|+++.. ...++.... ..+.++++.
T Consensus 281 --~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~~~~------~~G~~~~~~ 343 (403)
T PRK05093 281 --STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQ-----KYGVFSEIR------GMGLLIGAE 343 (403)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh-----hCCCeEeEe------eCceEEEEE
Confidence 011 2344456666667877643 35668888999999999987621 111111111 115677777
Q ss_pred eeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC
Q 010538 404 LKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS 483 (508)
Q Consensus 404 ~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 483 (508)
++.... -...++...|.++||.+.++ ..+.+|+++++..
T Consensus 344 l~~~~~--~~~~~~~~~l~~~Gv~v~~~---------------------------------------g~~~lRl~~~~~~ 382 (403)
T PRK05093 344 LKPQYK--GRARDFLNAAAEEGVMVLVA---------------------------------------GPDVLRFAPSLVI 382 (403)
T ss_pred ecCcch--hHHHHHHHHHHHCCeEEecC---------------------------------------CCCEEEEeCCCCC
Confidence 753210 01235777888889998752 1468999999999
Q ss_pred CHHHHHHHHHhhhhhhh
Q 010538 484 TFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 484 t~eev~~l~~~~~~~~~ 500 (508)
|.++++.+++.|.++++
T Consensus 383 ~~~~i~~~~~~l~~~l~ 399 (403)
T PRK05093 383 EEADIDEGLARFEKAVA 399 (403)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999988775
No 291
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.66 E-value=1.4e-13 Score=143.75 Aligned_cols=329 Identities=13% Similarity=0.068 Sum_probs=200.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .|.-+|.+++++.++.. ..+. ....+ ......++.++++++++. + .+.|++++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~-~~~~-~~~~~-----~~~~~~~la~~L~~~~~~--~--~~~f~~SG 101 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQAD-KLWH-IGNGY-----TNEPVLRLAKKLVDATFA--D--KVFFCNSG 101 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHH-hccc-ccCcc-----CCHHHHHHHHHHHhhCCC--C--EEEEeCCc
Confidence 6778888754 45558888888766543 2111 11111 123456678888888754 4 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEe-cccccchHHHHHHHHhc---------CCeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYT-MENHNSVLGIREYALSQ---------GAAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~-~~~h~s~~~~~~~~~~~---------G~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . .+...|+.. ...|.+........... ...+..+|.
T Consensus 102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 166 (397)
T TIGR03246 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY--------------- 166 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC---------------
Confidence 999998887652 1 123455554 45565555443321100 001111221
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc-C---HHHHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF-N---LDLINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~-~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
.|++.++ +.+ .+++++|++..++++.|.+. | +++|.++|++ +|+++|+|++
T Consensus 167 -----~d~~~l~--~~l------~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~------------~g~llI~DEv 221 (397)
T TIGR03246 167 -----NDLAAAK--ALI------SDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDR------------HNALLIFDEV 221 (397)
T ss_pred -----CCHHHHH--HHh------ccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEech
Confidence 1467777 554 35689999998888878665 4 5555555665 9999999999
Q ss_pred cc-CCCCC--C--CCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccc
Q 010538 252 KG-CVTQP--P--DLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEE 324 (508)
Q Consensus 252 ~~-~g~~~--~--d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (508)
|. +|... . ......+|+++ +.|.++ . | +|++++++++.+.+.....+
T Consensus 222 ~tG~Gr~G~~~a~~~~gv~pDi~t--~~K~lg-g-G~pigav~~~~~i~~~~~~~~~~---------------------- 275 (397)
T TIGR03246 222 QTGVGRTGELYAYMHYGVTPDILT--SAKALG-G-GFPIGAMLTTTEIAAHLKVGTHG---------------------- 275 (397)
T ss_pred hhcCCccccchhhhhcCCCCCEEE--eehhhh-C-CcceeEEEEcHHHHHhccCCCcC----------------------
Confidence 84 22111 1 11122467774 569776 2 4 79999998887655432110
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEe
Q 010538 325 LFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNL 404 (508)
Q Consensus 325 ~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (508)
... +.+....++..++++.+.+ +++.++++++.+++.+.|+++.. ...++..... .+.++.+.+
T Consensus 276 -~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~-----~~~~~~~vrg------~G~~~~i~~ 339 (397)
T TIGR03246 276 -TTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINA-----RYNVFSEIRG------KGLLIGAVL 339 (397)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh-----cCCCeEeeec------CceEEEEEE
Confidence 011 1344556666677877643 46788899999999999987621 1112221111 155666665
Q ss_pred eCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 405 KRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 405 ~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
..... -....+.+.|.++||.+.+. ..+.+|+++++.+|
T Consensus 340 ~~~~~--~~~~~~~~~l~~~Gv~~~~~---------------------------------------g~~~lR~~p~~~~t 378 (397)
T TIGR03246 340 TEAYQ--GKAKQFVNAAAEEGVIALIA---------------------------------------GPNVVRFAPSLVIS 378 (397)
T ss_pred cCchh--hHHHHHHHHHHHCCeEEeec---------------------------------------CCCEEEEeCCCCCC
Confidence 33110 01235778888999998651 14689999999999
Q ss_pred HHHHHHHHHhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~ 501 (508)
++|++++++++.+.++.
T Consensus 379 ~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 379 DDDIDEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887653
No 292
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.64 E-value=3.9e-14 Score=154.00 Aligned_cols=322 Identities=13% Similarity=0.047 Sum_probs=211.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~ 162 (508)
.....++.+.+|+.+|++.. ..+++|+|.++..++.++ ..+|+.||+....|-|+...+.+ .|+++++++...
T Consensus 194 ~G~i~eAe~~AA~~fgAd~t---yfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~haLil---sga~PVYl~P~r 266 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRS---YMVTNGTSTANKIVGMYS-APAGSTVLIDRNCHKSLTHLMMM---SDVTPIYFRPTR 266 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcE---EEEeCchHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHH---cCCeEEEecccc
Confidence 34578899999999999865 788899999999999998 68999999999999998875544 599999987653
Q ss_pred c--cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 163 A--VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 163 ~--~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+ +-+-. ++.=.++++.++ +.|++.. ...++..++++++ |..|.+.+++.|.++++.
T Consensus 267 n~~Gi~g~-------I~~~~~~~e~i~--~~i~~~p-~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~----------- 324 (714)
T PRK15400 267 NAYGILGG-------IPQSEFQHATIA--KRVKETP-NATWPVHAVITNS-TYDGLLYNTDFIKKTLDV----------- 324 (714)
T ss_pred cccCCccC-------CCccccCHHHHH--HHHHhCc-cccCccEEEEECC-CCccEecCHHHHHHHhCC-----------
Confidence 1 11111 111122467777 6665431 1122336777775 778999999999999997
Q ss_pred CCCeEEEEeccccC--CCCCC--CCCC--CCC---c--EEEEeccccccCCCcceEEEEechhH-hhhccccccCceEEe
Q 010538 241 KGRWMVLIDAAKGC--VTQPP--DLSK--YPV---D--FVVMSFYKIFGYPTGLGALIMRNDAA-KLLKNTYFSGGTVAA 308 (508)
Q Consensus 241 ~~g~~vivD~a~~~--g~~~~--d~~~--~~~---D--~~~~S~~K~~g~P~G~G~l~~~~~~~-~~l~~~~~g~~~~~~ 308 (508)
++ +++|.|++. ...|. +... .+. | +++-|.||++++.+..+++.++...- ++++..
T Consensus 325 -~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a--------- 392 (714)
T PRK15400 325 -KS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEA--------- 392 (714)
T ss_pred -CC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHH---------
Confidence 66 699999874 22221 1111 233 5 99999999988665556665543210 011111
Q ss_pred cccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce--EEEecC
Q 010538 309 SIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV--CTIYGT 386 (508)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~--~~~~~~ 386 (508)
-..+.+.+|+++-++++..+..++....-+.+.++..+++..+++.+.++.+.. .+ ++++.+
T Consensus 393 --------------~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~--~~w~~~~~~~ 456 (714)
T PRK15400 393 --------------YMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTES--DGWFFDVWQP 456 (714)
T ss_pred --------------HHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcc--cCceEEecCh
Confidence 223445678899999999999988753346778888999999999998874100 00 555543
Q ss_pred CCC-------------C---ccc-----CCCCceEEEEeeCCC------CCccCHHHHHHHHhhCCCeeccCCCCCchHH
Q 010538 387 YTS-------------E---VSY-----HDTGSMVSFNLKRPD------GSWFGYREVEKLASLSGIQLRTGCFCNPGAC 439 (508)
Q Consensus 387 ~~~-------------~---~~~-----~~~~~~v~~~~~~~~------~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~ 439 (508)
..- + ... .--..=+++..++.+ ...+....+.+.|+++||.+--.
T Consensus 457 ~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~-------- 528 (714)
T PRK15400 457 DHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKT-------- 528 (714)
T ss_pred hhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEec--------
Confidence 210 0 000 000112333343321 12244556888898889986432
Q ss_pred HhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 440 AKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 440 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
....+=+-++..+|.+++++|+++|.+|-+
T Consensus 529 -------------------------------d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 529 -------------------------------GPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred -------------------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 145677888888999999999999988744
No 293
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.64 E-value=1.9e-13 Score=143.23 Aligned_cols=337 Identities=13% Similarity=0.106 Sum_probs=198.5
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+.-+|.+++++.+++. .... ....+ ......++.++++++++. + .+.|++|+
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~-~~~~-~~~~~-----~~~~~~~la~~l~~~~~~--~--~v~~~~sG 105 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQAS-KFWH-TGNGY-----TNEPVLRLAKKLIDATFA--D--RVFFCNSG 105 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHh-hccc-ccCcc-----CCHHHHHHHHHHHhhCCC--C--eEEEcCCc
Confidence 6778899754 45558888888766542 2111 11111 123345677888887753 4 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEecc-cccchHHHHHHHHhcCCeEE---EEccCCc-cCccccccccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTME-NHNSVLGIREYALSQGAAAF---AIDVEEA-VDNDGLSESLVTSTKIS 180 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~-~h~s~~~~~~~~~~~G~~v~---~v~~~~~-~~~~~l~~~~~~~~~~~ 180 (508)
++|+..++.... . .++..|+.... -|......... .+.... ..|.... ... --
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~---~~~~~~~~~~~~~~~~~~~~------------~~ 170 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSA---GGQPKYSQDFAPLPPDIRHA------------AY 170 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhh---cCCcccccCCCCCCCCeeEe------------CC
Confidence 999988877642 1 23456666544 34333332222 121100 0011000 000 01
Q ss_pred cchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc--CHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC
Q 010538 181 LLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF--NLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ 257 (508)
Q Consensus 181 ~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~--~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~ 257 (508)
+|++.++ +.+ .+++++|++.. .+++|-+. |.+.+.++.+ +|++||+++|+|++|. +|..
T Consensus 171 ~d~~~l~--~~l------~~~~aaviiEP-v~~~gg~~~~~~~~l~~l~~---------l~~~~~~llI~DEv~tG~gr~ 232 (406)
T PRK12381 171 NDLNSAS--ALI------DDQTCAVIVEP-IQGEGGVIPADKAFLQGLRE---------LCDRHNALLIFDEVQTGVGRT 232 (406)
T ss_pred CCHHHHH--Hhc------cCCeeEEEEeC-CcCCCCCcCCCHHHHHHHHH---------HHHHcCCEEEEcchhhCCCCC
Confidence 2466777 554 34678888875 45565443 4444444433 4445999999999984 3221
Q ss_pred C--C--CCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 258 P--P--DLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 258 ~--~--d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
. . .......|++ ++.|.++ + | +|++++++++.+.+.+...+. ..+.
T Consensus 233 G~~~~~~~~~v~pDi~--t~sK~l~-g-G~~ig~~~~~~~~~~~~~~~~~~~------------------------t~~~ 284 (406)
T PRK12381 233 GELYAYMHYGVTPDVL--TTAKALG-G-GFPIGAMLTTEKCASVMTVGTHGT------------------------TYGG 284 (406)
T ss_pred cchhhhHhhCCCCCEE--Eehhhhh-C-CCceEEEEEcHHHHhhcCCCCCCC------------------------CCCC
Confidence 1 1 1122245764 6679887 4 4 899999998876655421110 0123
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW 411 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 411 (508)
+....++..++++.+.+ .++.++++++.+++.+.|+++.. ...++..... .+.++++.++.....
T Consensus 285 ~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~~vrg------~Gl~~~~~l~~~~~~- 349 (406)
T PRK12381 285 NPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINA-----RYGLFSEIRG------LGLLIGCVLNAEYAG- 349 (406)
T ss_pred CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh-----hCCCEEEEec------CeEEEEEEecCchhh-
Confidence 45556666777887653 45788899999999999987620 1111111111 256677776542100
Q ss_pred cCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHH
Q 010538 412 FGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVN 491 (508)
Q Consensus 412 ~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l 491 (508)
....+.+.+.++||.+... .++.+|+++++..|++|++++
T Consensus 350 -~~~~~~~~l~~~Gv~v~~~---------------------------------------g~~~lRl~p~~~~t~~~i~~~ 389 (406)
T PRK12381 350 -KAKQISQEAAKAGVMVLIA---------------------------------------GPNVVRFAPALNISEEEITTG 389 (406)
T ss_pred -HHHHHHHHHHHCCcEEeeC---------------------------------------CCCEEEEeCCccCCHHHHHHH
Confidence 1234778888999998642 136899999999999999999
Q ss_pred HHhhhhhhhhh
Q 010538 492 RCSSFDFVNFS 502 (508)
Q Consensus 492 ~~~~~~~~~~~ 502 (508)
++.+.+.++-+
T Consensus 390 ~~~l~~~l~~~ 400 (406)
T PRK12381 390 LDRFARACERF 400 (406)
T ss_pred HHHHHHHHHHH
Confidence 99999877643
No 294
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=1.5e-13 Score=138.23 Aligned_cols=335 Identities=12% Similarity=0.089 Sum_probs=217.6
Q ss_pred CCCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCC
Q 010538 38 ENGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSG 111 (508)
Q Consensus 38 ~~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g 111 (508)
.++.-|+|..+ .+-.+|.+++++.++. ...+.-+. .+ ..+...++-+.+++..+ ..+ .|.|++|
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~-~kl~h~sn-~~-----~~~~~~~la~~L~~~s~-~~d--~vff~NS 108 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQA-EKLWHVSN-LF-----YNEPQAELAEKLVELSP-FAD--RVFFCNS 108 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHH-HHhhhccc-cc-----CChHHHHHHHHHHhhCc-ccc--EEEEcCC
Confidence 37889999633 4556899998876643 33332111 11 12335566777888877 566 8999999
Q ss_pred hHHHHHHHHhhcC-CCC---CCeEEEecccccc-hHHHHH------HHHhcC---CeEEEEccCCccCcccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSH---QSSYMYTMENHNS-VLGIRE------YALSQG---AAAFAIDVEEAVDNDGLSESLVTST 177 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~---g~~vl~~~~~h~s-~~~~~~------~~~~~G---~~v~~v~~~~~~~~~~l~~~~~~~~ 177 (508)
++||+..++.... +.. ..+||+....+-. .+..+. +.+.++ -.++.+|.+
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn---------------- 172 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN---------------- 172 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC----------------
Confidence 9999998876542 222 3467766544422 111111 111111 112333332
Q ss_pred ccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CC
Q 010538 178 KISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VT 256 (508)
Q Consensus 178 ~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~ 256 (508)
|+++++ +++ +++|..|++.-++-..|.+.+-++.-+.+++ +|++||+++|.|++|.. |.
T Consensus 173 ----Di~al~--~ai------~~~taAvivEPIQGEgGV~~~~~~fl~~lr~--------lCd~~g~LLI~DEVQtG~GR 232 (404)
T COG4992 173 ----DIEALE--AAI------DEDTAAVIVEPIQGEGGVIPAPPEFLKALRE--------LCDEHGALLILDEVQTGLGR 232 (404)
T ss_pred ----CHHHHH--HHh------ccCeEEEEEecccCCCCCCCCCHHHHHHHHH--------HHHHhCeEEEEeccccCCCc
Confidence 567888 555 5689999999999999999997766666665 66779999999999974 22
Q ss_pred CC----CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCC
Q 010538 257 QP----PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTAS 332 (508)
Q Consensus 257 ~~----~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 332 (508)
.- ........|+++.. |.+||---+|.+++++...+.+.|-.+|.. . .-|
T Consensus 233 TGk~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~~~~~~~~~~G~HgST----------------------f--GGN 286 (404)
T COG4992 233 TGKLFAYEHYGVEPDILTLA--KALGGGFPIGAMLATEEIASAFTPGDHGST----------------------F--GGN 286 (404)
T ss_pred cchHHHHHHhCCCCCEEEee--ccccCCccceeeEEchhhhhcCCCCcccCC----------------------C--CcC
Confidence 11 01112237898887 976632238999999665555555433321 1 124
Q ss_pred hhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc
Q 010538 333 FLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF 412 (508)
Q Consensus 333 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 412 (508)
..+.++..++++.+.+ +.+.++.+++.++|.+.|+++.. .+.++..-.. ++-++-+.+....
T Consensus 287 pLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~-----~~~~v~~vRG------~GLmiGiel~~~~---- 348 (404)
T COG4992 287 PLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKR-----RYPLVKEVRG------RGLMIGIELKEPY---- 348 (404)
T ss_pred HHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhh-----cCCceeeeec------ceeEEEEEecCcc----
Confidence 4556666677887766 56778888999999999988742 2223332221 2677777775531
Q ss_pred CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHH
Q 010538 413 GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNR 492 (508)
Q Consensus 413 ~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~ 492 (508)
...++.+.+.++|+.+-... ++.+|+.+..-.|+||++..+
T Consensus 349 ~a~~~~~~~~~~gvL~~~a~---------------------------------------~~ViR~~PpL~i~~eei~~~~ 389 (404)
T COG4992 349 RARDIVRALREEGVLVLPAG---------------------------------------PNVIRFLPPLVITEEEIDEAL 389 (404)
T ss_pred cHHHHHHHHHHCCeEEecCC---------------------------------------CCeEEecCCccCCHHHHHHHH
Confidence 23468999999999976531 569999999999999999999
Q ss_pred Hhhhhhhhh
Q 010538 493 CSSFDFVNF 501 (508)
Q Consensus 493 ~~~~~~~~~ 501 (508)
+.+...++-
T Consensus 390 ~~l~~~l~~ 398 (404)
T COG4992 390 DALERALAA 398 (404)
T ss_pred HHHHHHHHH
Confidence 999987763
No 295
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=1.9e-13 Score=142.48 Aligned_cols=336 Identities=13% Similarity=0.050 Sum_probs=198.3
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+.-+|.+++++.++.. ... .+.... ..+...++.+++++..+ .+ .++|++|+
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~-~~~-~~~~~~-----~~~~~~~la~~l~~~~~--~~--~v~f~~SG 102 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAE-KLI-NPSPAF-----YNEPMAKLAGLLTQHSC--FD--KVFFANSG 102 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHH-hcc-cccccc-----cCHHHHHHHHHHhhccC--CC--EEEEeCCc
Confidence 6778888753 45558888888766542 211 111111 11223334444444322 34 79999999
Q ss_pred HHHHHHHHhhcCC------CCCCeEEEe-cccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhh
Q 010538 113 TAALKLVGEAFPW------SHQSSYMYT-MENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 113 t~al~~~~~~l~~------~~g~~vl~~-~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
++|+..++..... .+...||+. ...|.+...........+......|........ --.|+++
T Consensus 103 seA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~-----------~~~d~~~ 171 (395)
T PRK03715 103 AEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKA-----------ELNDIAS 171 (395)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceee-----------CCchHHH
Confidence 9999988876631 122445555 456666555544321111111111111100000 0014677
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCCC--
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQP-- 258 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~~-- 258 (508)
++ +.+ .+++++|++..+++..|.+.| +++|.++|++ +|+++|+|++|+. |..-
T Consensus 172 l~--~~l------~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~------------~~~llI~DEv~tG~GRtG~~ 231 (395)
T PRK03715 172 VE--KLI------TDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQ------------HGLLLIVDEVQTGCGRTGTL 231 (395)
T ss_pred HH--HHc------CCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEeccccCCCCCcch
Confidence 77 554 346889999999999999988 8888888887 9999999999872 2111
Q ss_pred --CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHH
Q 010538 259 --PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSI 336 (508)
Q Consensus 259 --~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 336 (508)
.+......|++++| |.+++-..+|.++++++... +.+...+ . .. +.+....
T Consensus 232 ~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~i~~-~~~~~~~---------------------~-T~--~g~pl~~ 284 (395)
T PRK03715 232 FAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAEVAV-FEAGDQG---------------------G-TY--NGNPLMT 284 (395)
T ss_pred hhHhhcCCCCceeeeh--hhhhCCcceEEEEEcccccc-ccCCCcC---------------------C-CC--CCCHHHH
Confidence 11112247887665 97774222788888887631 1111000 0 01 2345556
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHH
Q 010538 337 ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYRE 416 (508)
Q Consensus 337 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 416 (508)
++..++++.+.+ +++.++.+++.++|++.|+++.. ..++..+ .+ .+.++.+.+.+... ..
T Consensus 285 aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~---~~~i~~v--rG-------~Glm~~i~l~~~~~-----~~ 344 (395)
T PRK03715 285 AVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSE---ERGLEGE--RG-------EGLLRALLLGKDIG-----PQ 344 (395)
T ss_pred HHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhh---cCCcCeE--Ec-------ceeEEEEEecCchH-----HH
Confidence 666778887764 46778899999999999886521 0112111 11 27888888754211 12
Q ss_pred HHHHHhhC---CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHH
Q 010538 417 VEKLASLS---GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRC 493 (508)
Q Consensus 417 l~~~L~~~---gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~ 493 (508)
+.+.+.+. ||.+... ....+|+++....|++||+.+++
T Consensus 345 ~~~~~~~~~~~Gi~~~~~---------------------------------------~~~~lR~~p~l~~t~~ei~~~~~ 385 (395)
T PRK03715 345 IVEKARDMQPDGLLLNAP---------------------------------------RPNLLRFMPALNVTTEEIDQMIA 385 (395)
T ss_pred HHHHHHhccCCCEEEeec---------------------------------------CCCEEEEeCCcccCHHHHHHHHH
Confidence 44455555 9887531 13679999999999999999999
Q ss_pred hhhhhhhhh
Q 010538 494 SSFDFVNFS 502 (508)
Q Consensus 494 ~~~~~~~~~ 502 (508)
.|.+.++.+
T Consensus 386 ~l~~~l~~~ 394 (395)
T PRK03715 386 MLRSVLDKL 394 (395)
T ss_pred HHHHHHHhh
Confidence 999887643
No 296
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=3.4e-13 Score=146.71 Aligned_cols=323 Identities=13% Similarity=0.048 Sum_probs=210.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC
Q 010538 83 CDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE 162 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~ 162 (508)
.....++.+.+|+.+|++.. ..+++|+|.++..++.+. ..+|+.||+....|-|+...+.+ .|+++++++...
T Consensus 194 ~G~i~eAe~~aA~~fgAd~t---yfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~~aLil---sga~PVYl~P~~ 266 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQS---YIVTNGTSTSNKIVGMYA-APAGSTLLIDRNCHKSLAHLLMM---SDVVPIWLKPTR 266 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcE---EEEeCChHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHH---cCCeeEEecccc
Confidence 34578899999999999865 788899999999999998 78999999999999998875544 599999987553
Q ss_pred c--cCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 163 A--VDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 163 ~--~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+ +-+-. ++.-.++.+.++ +.|++.. ..++++.++++++ |..|.+.+++.|.+++.-
T Consensus 267 n~~Gi~g~-------I~~~~~~~e~I~--~~i~~~p-~~~~p~~vvit~p-TYdGi~yd~~~I~~~~g~----------- 324 (713)
T PRK15399 267 NALGILGG-------IPRREFTRDSIE--EKVAATT-QAQWPVHAVITNS-TYDGLLYNTDWIKQTLDV----------- 324 (713)
T ss_pred cccCCcCC-------CChhhccHHHHH--HHHHhCC-CcCCceEEEEECC-CCCceeeCHHHHHHHhCC-----------
Confidence 1 11110 111122447777 6665431 1134467888875 778999999999988752
Q ss_pred CCCeEEEEeccccC--CCCCC--CCCCC----CCcEE---EEeccccccCCCcceEEEEechhH-hhhccccccCceEEe
Q 010538 241 KGRWMVLIDAAKGC--VTQPP--DLSKY----PVDFV---VMSFYKIFGYPTGLGALIMRNDAA-KLLKNTYFSGGTVAA 308 (508)
Q Consensus 241 ~~g~~vivD~a~~~--g~~~~--d~~~~----~~D~~---~~S~~K~~g~P~G~G~l~~~~~~~-~~l~~~~~g~~~~~~ 308 (508)
. ++++|.||+. ...|. +...+ +.|.+ +-|.||++++.+..+++.++...- ++++..
T Consensus 325 --~-~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a--------- 392 (713)
T PRK15399 325 --P-SIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEA--------- 392 (713)
T ss_pred --C-EEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHH---------
Confidence 1 5689999874 22221 11111 35655 899999988776678887765321 111111
Q ss_pred cccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce-EEEecCC
Q 010538 309 SIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV-CTIYGTY 387 (508)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~-~~~~~~~ 387 (508)
-..+.+.+|+++-++++..+..++....-+.+.++..+++..+++.+.++.+.- .+. ++++.+.
T Consensus 393 --------------~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~-~~w~f~~~~~~ 457 (713)
T PRK15399 393 --------------FMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREES-DGWFFDIWQPE 457 (713)
T ss_pred --------------HHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccc-cCceeeecCcc
Confidence 223445678899999999999988753346777888889999999998763100 000 3454431
Q ss_pred C-------------CC---cc----c-CCCCceEEEEeeCCC------CCccCHHHHHHHHhhCCCeeccCCCCCchHHH
Q 010538 388 T-------------SE---VS----Y-HDTGSMVSFNLKRPD------GSWFGYREVEKLASLSGIQLRTGCFCNPGACA 440 (508)
Q Consensus 388 ~-------------~~---~~----~-~~~~~~v~~~~~~~~------~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~ 440 (508)
. .. .. . .--..=+++..++.+ ...+....+.+.|+++||.+--.
T Consensus 458 ~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~--------- 528 (713)
T PRK15399 458 NVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKT--------- 528 (713)
T ss_pred ccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEec---------
Confidence 0 00 00 0 000112333343321 12345566889999999997532
Q ss_pred hhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 441 KYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 441 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
....+=+-++..+|.+++++|+++|.+|-+
T Consensus 529 ------------------------------d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 529 ------------------------------GPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred ------------------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 145677778888999999999999988744
No 297
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=4.2e-14 Score=141.59 Aligned_cols=340 Identities=16% Similarity=0.125 Sum_probs=224.6
Q ss_pred CeeeeCCC-CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 41 TVYLDHAG-ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 41 ~iyld~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
+=||..+. .++..+.+.+++ +.+..... . +.... ...+...++.+.+|+++|.+.. ++|..|-. .+.+.
T Consensus 144 YNYLGFa~~~g~ca~~~~~~~-~kygl~~c-s--s~~e~--G~~~~hkelE~l~A~f~g~e~a---~vF~mGf~-TNs~~ 213 (519)
T KOG1357|consen 144 YNYLGFAQSVGPCAEASLKSF-DKYGLSRC-S--SRHEA--GTTEEHKELEELVARFLGVEDA---IVFSMGFA-TNSMN 213 (519)
T ss_pred cccccccccCCcCChHHHHHH-HHhccccc-c--cchhc--ccHHHHHHHHHHHHHhcCCcce---EEEecccc-ccccC
Confidence 44666655 455556666554 43422111 1 11122 2456778899999999999877 88887743 44556
Q ss_pred HhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCC
Q 010538 120 GEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAG 199 (508)
Q Consensus 120 ~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~ 199 (508)
+.++ ..++.-|+....+|.|+...+++ .|+.++....++-.+++. .|+ ++|....+.+
T Consensus 214 ~p~l-~~~gsLIiSDelNHaSi~~GaRL---SgAtiRVfkHNdm~~LEr----------------~Lr--d~I~~gqP~T 271 (519)
T KOG1357|consen 214 IPSL-LGKGSLIISDELNHASLITGARL---SGATTRVFRHNDMQGLER----------------LLR--DAIVYGQPKT 271 (519)
T ss_pred ccee-ecCCcceeeccccchheeccccc---cCceEEEEecCCHHHHHH----------------HHH--HHHhcCCCCc
Confidence 6666 67889999999999998766555 488888887765333311 122 3332222222
Q ss_pred C---CceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC---------CCCCCCc
Q 010538 200 D---AYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD---------LSKYPVD 267 (508)
Q Consensus 200 ~---~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d---------~~~~~~D 267 (508)
. +.-+|++....++-|.+.++.++.+++++ +.++++.|++|+.|+.+.. +..-++|
T Consensus 272 hrp~kki~iivegiysmEg~iv~Lp~vvalkkk------------ykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvD 339 (519)
T KOG1357|consen 272 HRPWKKILICVEGIYSMEGTIVDLPEVVALKKK------------YKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVD 339 (519)
T ss_pred CCcchheeeeeccceeccCeecccHHHHHhhcc------------ccEEEEeeccccccccCCCCcceeeccCCCchhhe
Confidence 1 12355556677788999999999999997 9999999999998776321 2233689
Q ss_pred EEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN 347 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 347 (508)
++.+++.|.|| ..| |++-.+++.++.++..... .....+.+.+.......+++.+.
T Consensus 340 ImMGtftKSfg-a~G-Gyiagsk~lid~lrt~s~~----------------------~~yat~~sppvaqq~~ssl~~i~ 395 (519)
T KOG1357|consen 340 IMMGTFTKSFG-AAG-GYIAGSKELIDYLRTPSPS----------------------ALYATSLSPPVAQQILTSVKHIM 395 (519)
T ss_pred eecceehhhcc-ccc-ceecCcHHHHhhhccCCCc----------------------eeecccCChHHHHHHHHHHHhhc
Confidence 99999999999 555 8888888887765533111 11112223333333345566554
Q ss_pred h----cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhh
Q 010538 348 S----LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASL 423 (508)
Q Consensus 348 ~----~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~ 423 (508)
- .+.++..+++.+.+.+++..+++. ++.+++... ++++.+.+-.+..- ..+.+.+.+
T Consensus 396 G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-------gfivyG~~d--------SpVvplll~~~~k~----~~f~r~~l~ 456 (519)
T KOG1357|consen 396 GEDGTNRGRQKIERLAENSRYFRWELQKM-------GFIVYGNND--------SPVVPLLLYGPAKI----VAFSREMLE 456 (519)
T ss_pred CCCcccHHHHHHHHHHhhhHHHHHhhhcC-------cEEEecCCC--------CCcceeeecCcccc----cHHHHHHHh
Confidence 2 235777888999999999999987 799998776 56666665443221 136777777
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
++|.+-...+.+.+.. .+.+|++.+..+|.|+++++++.+...-
T Consensus 457 ~nigvVvvgfPatpl~--------------------------------e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 457 RNIGVVVVGFPATPLL--------------------------------ESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred cCceEEEEeCCCchHH--------------------------------HhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 8877665554443321 5679999999999999999998876543
No 298
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.59 E-value=2.2e-13 Score=135.14 Aligned_cols=360 Identities=14% Similarity=0.162 Sum_probs=187.4
Q ss_pred hHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCC----CCccchhh-hhhHHHHHHHHHHHHHcCCC
Q 010538 26 IDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNP----HSQSDISL-ATCDIVRAAREQVLDYFNAS 100 (508)
Q Consensus 26 ~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~r~~la~~~~~~ 100 (508)
.++++. +|..+...-+-|| -+-+.|++..+. +...++. ..+.. ....-..+ ...+.+.++|+.+|+++|++
T Consensus 10 ~~~l~~-~y~~~ka~~L~Ld-mtRGKPs~eQLd-LS~~lL~-~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~llgv~ 85 (425)
T PF12897_consen 10 LAELRK-QYEELKAKGLKLD-MTRGKPSPEQLD-LSNPLLD-LPGSSDYLADGTDCRNYPGGLDGIPEARELFAELLGVP 85 (425)
T ss_dssp HHHHHH-HHHHHHHTT--EE-S---S--HHHHH-GGGGGGG-SSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHHTS-
T ss_pred HHHHHH-HHHHHHHcCCCcc-cCCCCCCHHHHh-hhHHHhc-CCCCccccCCCccccCCCCccCChHHHHHHHHHHhCCC
Confidence 344565 6655545567788 446666777764 2333443 21111 11001112 33566889999999999999
Q ss_pred CCCceEEEcCChHHHHHH--HHhhcC---------CCC--CCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcc
Q 010538 101 MKDYKCIFTSGATAALKL--VGEAFP---------WSH--QSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDND 167 (508)
Q Consensus 101 ~~~~~i~~t~g~t~al~~--~~~~l~---------~~~--g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~ 167 (508)
++ +|++..+++-.++- +..++. |.. .-+.|++. |+|.+-....+.+|++.+.||+++++.
T Consensus 86 ~~--~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv---PGYDRHFai~E~~Giemi~VpM~~dGP-- 158 (425)
T PF12897_consen 86 PE--NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV---PGYDRHFAITEHFGIEMIPVPMTEDGP-- 158 (425)
T ss_dssp GG--GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE---S--HHHHHHHHHCT-EEEEEEEETTEE--
T ss_pred HH--HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC---CCchHHHHHHHhhCcEEEecCCCCCCC--
Confidence 99 89888887755432 222221 211 23578776 677777777888999999999987763
Q ss_pred ccccccccccccccchhhhhcCCCCCCCCCCCCCceEE-EEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEE
Q 010538 168 GLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLF-AFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMV 246 (508)
Q Consensus 168 ~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv-~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~v 246 (508)
|.+.++ +.+.+ ++..|.+ +++..+||||.+++-+.+.+++.= -+...+..|
T Consensus 159 --------------DmD~Ve--~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m--------~~AA~DFRI 210 (425)
T PF12897_consen 159 --------------DMDMVE--ELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAM--------KTAAPDFRI 210 (425)
T ss_dssp ---------------HHHHH--HHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS----------SSTT-EE
T ss_pred --------------CHHHHH--HHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcC--------CcCCcCeEE
Confidence 577777 55432 4566666 669999999999999988888862 122379999
Q ss_pred EEeccccCCCCC----C----CCC-------CCCCcEEEEeccc-cccCCCcceEEEEechhHhhhccccccCceEEecc
Q 010538 247 LIDAAKGCVTQP----P----DLS-------KYPVDFVVMSFYK-IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASI 310 (508)
Q Consensus 247 ivD~a~~~g~~~----~----d~~-------~~~~D~~~~S~~K-~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 310 (508)
++|.++++-+.- . |+- ..+.-+..+|++| +|. -.|++++-.+++.++.+...+..
T Consensus 211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~-GaGva~~aaS~~Nl~~~~~~~~~-------- 281 (425)
T PF12897_consen 211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFP-GAGVAFFAASEANLAWIKKHLSV-------- 281 (425)
T ss_dssp EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-T-TSS-EEEEE-HHHHHHHHHHHHH--------
T ss_pred EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccC-CcceeeeecCHHHHHHHHHHhcC--------
Confidence 999998875541 1 110 1123378899999 566 33799999998887766544210
Q ss_pred cchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh-c-ChHHHHHHHHHH--------HHHHHHHHh-cccCCCCCc
Q 010538 311 ADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS-L-TVPAICRHIASL--------GMYVRKVLL-SLRHENGAD 379 (508)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~-~-g~~~i~~~~~~l--------~~~l~~~L~-~l~~~~~~~ 379 (508)
...|.-- +-.++ -.+++.+ . |+....++++++ .+.|.++|. .. .
T Consensus 282 ---------------~tIgpdK---vNQLR-Hvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~------~ 336 (425)
T PF12897_consen 282 ---------------QTIGPDK---VNQLR-HVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL------G 336 (425)
T ss_dssp ---------------H-S---H---HHHHH-HHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG------T
T ss_pred ---------------ceeCccH---HHHHH-HHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC------C
Confidence 0011111 11122 2233332 1 333333333222 234444554 32 1
Q ss_pred eEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeecc-CCCCCchHHHhhcCCChhhhhhhhhcCC
Q 010538 380 VCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRT-GCFCNPGACAKYLGLSHSDLLSNIEAGH 458 (508)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~-g~~~~~~~~~~~~~~~~s~~~~~~~~~~ 458 (508)
..+...|.+ +.+++|++.+..+ +.++++.++.||.+++ |..+-.+
T Consensus 337 ia~Wt~P~G--------GYFIsld~~~G~A-----krvV~lakeAGV~LT~AGAtfPyg--------------------- 382 (425)
T PF12897_consen 337 IASWTKPKG--------GYFISLDVLDGTA-----KRVVELAKEAGVALTPAGATFPYG--------------------- 382 (425)
T ss_dssp SEEE---SB--------SS-EEEEESTT-H-----HHHHHHHHHTTEE---TTTTSGGG---------------------
T ss_pred eeEecCCCC--------ceEEEEecCCChH-----HHHHHHHHHhCceeCCCCCCCCCC---------------------
Confidence 234444444 8999999877533 4589999999999987 4433221
Q ss_pred ccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 459 VCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 459 ~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+++ .+..|||+++ |-+.||++..++.+.-+++.+
T Consensus 383 ---~DP------~D~nIRiAPS-~P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 383 ---KDP------RDSNIRIAPS-YPSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp -----T------TS-EEEE--S-SS-HHHHHHHHHHHHHHHHHH
T ss_pred ---CCC------CCCcEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 111 2678999999 468999999999988877653
No 299
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=3.5e-14 Score=132.76 Aligned_cols=290 Identities=14% Similarity=0.097 Sum_probs=195.9
Q ss_pred HHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccc
Q 010538 90 REQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGL 169 (508)
Q Consensus 90 r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l 169 (508)
+..+++--+..++ .|.+.-|+.+.+.+++++...++.++|+..+..|+-+.-.+ .-.+++|+.+|.+.+..+
T Consensus 75 s~a~~~dkpLt~d--nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A---~iNd~eVvkvpl~pdF~l--- 146 (375)
T KOG0633|consen 75 SDALAQDKPLTSD--NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDA---AINDAEVVKVPLNPDFSL--- 146 (375)
T ss_pred hhhcccCCCCCcc--ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEe---ecCCceEEEecCCCCccc---
Confidence 3444555566777 89999999999999999985444488988886665432211 124899999999886665
Q ss_pred ccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 170 SESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
+++++. +.++. +..+|+++++++.||||..+..+.|.++.+-| .+.+|+||
T Consensus 147 ------------nvdai~--evl~~----ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p-----------~nglVVvD 197 (375)
T KOG0633|consen 147 ------------NVDAIA--EVLEL----DSKIKCIFLTSPGNPTGSIIKEDDILKILEMP-----------DNGLVVVD 197 (375)
T ss_pred ------------cHHHHH--HHHhc----cccceEEEEcCCCCCCcccccHHHHHHHHhCC-----------CCcEEEEe
Confidence 566666 44432 34679999999999999999999999999973 47899999
Q ss_pred ccccC----CCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKGC----VTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~~----g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
.++-- +....=++++.--+++-+++|.|| .+| +|+.+.+...++-+...-
T Consensus 198 EAYidFsg~~S~~~lV~kYpNLivlqTlSKsfG-LAGiRvG~~~~~~~ia~iln~~K----------------------- 253 (375)
T KOG0633|consen 198 EAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFG-LAGIRVGYGAFPLSIAEILNRAK----------------------- 253 (375)
T ss_pred eeeEeeccccccchHhHhCCceeehhhhhhhcC-cceeEeecccccHHHHHHHHhcc-----------------------
Confidence 98742 111122344445577789999999 778 788888887765443220
Q ss_pred ccccCCCCChh---HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCcccCCCCce
Q 010538 324 ELFEDGTASFL---SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSYHDTGSM 399 (508)
Q Consensus 324 ~~~~~gt~~~~---~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 399 (508)
...|++ ..+++. |+.--.-.-++..+..+.+-+.+|..+|.+++ .+. ..++.. +++
T Consensus 254 -----aPYNiS~~~s~~AL~-Als~~n~kkme~~rdaiv~er~RL~keLt~v~------~~~~~~gg~d--------aNF 313 (375)
T KOG0633|consen 254 -----APYNISVAGSVAALA-ALSDSNGKKMEDVRDAIVRERERLFKELTEVP------FLNDYPGGSD--------ANF 313 (375)
T ss_pred -----CCccccchhHHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHHhhcCc------cccCCCCccc--------ccE
Confidence 001111 122222 22210111367888888899999999998874 333 222222 788
Q ss_pred EEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 400 VSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 400 v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
+.+++.+.+.. .......+.+.+.||.||--. ... ...|++||++
T Consensus 314 iLi~v~~~~n~-~akkly~q~at~~gVvVRfrg---se~-------------------------------~c~G~lRitv 358 (375)
T KOG0633|consen 314 ILIEVTGGDNG-MAKKLYKQDATKMGVVVRFRG---SEE-------------------------------GCKGYLRITV 358 (375)
T ss_pred EEEEEcCCCcH-HHHHHHHHHHHhcceEEEEcC---Ccc-------------------------------ccceeEEEEc
Confidence 88998765432 233345556678899997421 100 1268999999
Q ss_pred CCCCCHHHHHHHHHhhhhh
Q 010538 480 GYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~~~~ 498 (508)
+ |.||-+.|++-+++|
T Consensus 359 G---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 359 G---TPEENTVLMKCLKQF 374 (375)
T ss_pred C---CcccchHHHHHHHhh
Confidence 9 999999999888876
No 300
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=2.2e-12 Score=136.31 Aligned_cols=360 Identities=11% Similarity=0.027 Sum_probs=205.4
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .|--+|.+.+++.+++. .... ....+. ......++-+.+++.+...-+ .+.|++++
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-~~~~-~~~~~~----~~~~~~~la~~L~~~~p~~~~--~v~f~~sG 110 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTD-KLIH-YTPIYG----FPVEPLLLAEKLIEIAPGDNP--KVSFGLSG 110 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHH-hccC-cccccc----CcHHHHHHHHHHHHhCCCCCC--EEEEcCCH
Confidence 7888999743 35558888888766543 2211 111111 122234455567777765445 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecc-cccchHHHHHHHH-----h--cC--CeEEEEccCCccCcccccccccccccccc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTME-NHNSVLGIREYAL-----S--QG--AAAFAIDVEEAVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~-~h~s~~~~~~~~~-----~--~G--~~v~~v~~~~~~~~~~l~~~~~~~~~~~~ 181 (508)
|+|+..++.... ..+...|+.... -|........... + .+ ..+..+|......... . .........
T Consensus 111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 187 (443)
T PRK08360 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPF-G--KEPGSCKME 187 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccc-c--CchhhhHHH
Confidence 999988766542 234456665543 3433333222110 0 01 1123333321110000 0 000000001
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVT 256 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~ 256 (508)
+.+.++ +.+++ ....++++.|++.-+++++|.+.| ++++.++|++ +|+++|+|++|+ +|.
T Consensus 188 ~~~~~~--~~l~~-~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~------------~g~llI~DEv~~g~gr 252 (443)
T PRK08360 188 CVEYIK--EKFEG-EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDE------------HGILLVVDEVQSGLGR 252 (443)
T ss_pred HHHHHH--HHHHh-ccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEeccccCCCc
Confidence 233344 33321 111367899999888999999998 4456666665 999999999987 332
Q ss_pred CC----CCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC
Q 010538 257 QP----PDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT 330 (508)
Q Consensus 257 ~~----~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 330 (508)
.. ........|++++ +|.++ + | +|++++++++.+.+.....+ . ...
T Consensus 253 ~G~~~a~~~~~~~pDiitl--sK~l~-~-G~pigav~~~~~i~~~~~~~~~~-----------------------~-T~~ 304 (443)
T PRK08360 253 TGKWFAIEHFGVEPDIITL--GKPLG-G-GLPISATIGRAEIMDSLPPLAHA-----------------------F-TLS 304 (443)
T ss_pred CccchhhhhcCCCCCEEEe--ccccc-C-CceeEEEEEcHHHHhhhcCCCCC-----------------------C-CCC
Confidence 21 1111234677755 79888 5 4 89999998887665432110 0 112
Q ss_pred CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC-
Q 010538 331 ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG- 409 (508)
Q Consensus 331 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 409 (508)
.+....++..++++.+.+. .+.++.+++.++|++.|+++.. ...++..... ++.++.+.+.+...
T Consensus 305 ~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~-----~~~~v~~vrg------~Gl~~gie~~~~~~~ 370 (443)
T PRK08360 305 GNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKK-----KHELIGDVRG------IGLMIGVDLVKDRET 370 (443)
T ss_pred cCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHH-----hCCCeeeeec------cceEEEEEEecCCcc
Confidence 3344466666778877653 4678888888888888876521 1111221111 26677777643211
Q ss_pred CccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 410 SWFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 410 ~~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
...+ ...+.+.+.++||.+... ..+.+|+++.+.+|++
T Consensus 371 ~~~~~~~~~~~~~~l~~~Gi~~~~~---------------------------------------~~~~lr~~P~l~~t~~ 411 (443)
T PRK08360 371 KERAYEEAAKVVWRAWELGLIVTFF---------------------------------------SGNVLRIQPPLTIEKE 411 (443)
T ss_pred cCccHHHHHHHHHHHHHCCeEEeec---------------------------------------CCCEEEEeCCCCCCHH
Confidence 0011 134677788899997541 1467999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhc
Q 010538 487 DAKVNRCSSFDFVNFSQFL 505 (508)
Q Consensus 487 ev~~l~~~~~~~~~~~~~~ 505 (508)
||+++++++.+.++-++..
T Consensus 412 ~id~~~~~l~~~l~~~~~~ 430 (443)
T PRK08360 412 VLDEGLDILEEAIEDVEEG 430 (443)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999988766543
No 301
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.57 E-value=2.6e-12 Score=134.73 Aligned_cols=351 Identities=13% Similarity=0.097 Sum_probs=198.9
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCC-CCceEEE-cC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASM-KDYKCIF-TS 110 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~~i~~-t~ 110 (508)
++..|+|..+. +--+|.+++++.++...... .... .. ......++-+++++.+..+. ....+.| ++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~-~~---~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 106 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI--IHSL-DM---ATEAKREFLETFNEIILKPRGLDYKVQFPGP 106 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc--eecc-cc---CcHHHHHHHHHHHHhccCccCCCceEEEeCC
Confidence 78899997443 56689999887665432111 1111 00 12233445566666542221 1014666 48
Q ss_pred ChHHHHHHHHhhcC-CCCCCeEEEecccccc-hHHHHHHHH----h--cC---CeEEEEccCCccCcccccccccccccc
Q 010538 111 GATAALKLVGEAFP-WSHQSSYMYTMENHNS-VLGIREYAL----S--QG---AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 111 g~t~al~~~~~~l~-~~~g~~vl~~~~~h~s-~~~~~~~~~----~--~G---~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
++++|+..++.... ..+..+||.....|-+ ...+..... . .| ..+..+|.......+
T Consensus 107 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------------ 174 (412)
T TIGR02407 107 TGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGD------------ 174 (412)
T ss_pred CchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccc------------
Confidence 99999988776543 2344567665544333 333332210 0 11 122233322100000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc-CHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF-NLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ 257 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~-~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~ 257 (508)
..+++.++ +.+.+.....+++..|++..+.+..|.+. |.+.+.++.+ +|+++|+++|+|++++ +|..
T Consensus 175 ~~~~~~l~--~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~---------lc~~~g~llI~DEV~tG~GRt 243 (412)
T TIGR02407 175 VDTIAYFE--KLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEK---------LCRRHDILLIVDDIQAGCGRT 243 (412)
T ss_pred hhHHHHHH--HHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHH---------HHHHcCCEEEEechhhCCCcc
Confidence 01244555 55532111114678888988999999855 4443333333 4445999999999986 3321
Q ss_pred ----CCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 258 ----PPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 258 ----~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
..+......|++++| |+++ +.| +|+++++++. ..+.+...+ ...+.
T Consensus 244 G~~~a~~~~~v~PDi~~~~--K~lg-~~G~pigav~~~~~~-~~~~~~~~~------------------------~T~~g 295 (412)
T TIGR02407 244 GTFFSFEPAGIEPDIVCLS--KSIS-GYGLPLALTLIKPEL-DVWKPGEHN------------------------GTFRG 295 (412)
T ss_pred chhHHhcccCCCCCEEEec--hhcc-CCccceeEEEEchhh-hccCCCccC------------------------CCCCc
Confidence 122334467888765 9988 655 8999998875 433221110 01123
Q ss_pred ChhHHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC
Q 010538 332 SFLSIASIRHGFNL-INSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS 410 (508)
Q Consensus 332 ~~~~~~~l~~al~~-~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 410 (508)
|....++..++++. +.+ .++.++..++.+++.+.|+.+.. ..+.+ +..... .+.++++.+++.+
T Consensus 296 npl~~aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~l~~--~~~~~-~~~vrg-------~Gl~~~l~l~~~~-- 360 (412)
T TIGR02407 296 NNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDRIVA--EYPEL-IKQVRG-------RGLMQGIECGDGD-- 360 (412)
T ss_pred cHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHh--hCCCc-eEeeec-------ceeEEEEEecChH--
Confidence 44555555667773 543 46778888888888888775421 00111 111111 2678888886531
Q ss_pred ccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHH
Q 010538 411 WFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKV 490 (508)
Q Consensus 411 ~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~ 490 (508)
....+.+.+.++||.+.+.. . .++.||+++...+|++|+++
T Consensus 361 --~~~~~~~~~~~~Gv~v~~~~---~----------------------------------~~~~lr~~p~l~~t~~~i~~ 401 (412)
T TIGR02407 361 --LAGKIAKAAFENGLIIETSG---P----------------------------------NDEVIKLLPPLTIDEETLQQ 401 (412)
T ss_pred --HHHHHHHHHHHCCCEEeccC---C----------------------------------CCCEEEEECCCCCCHHHHHH
Confidence 12347788889999986521 0 14689999999999999999
Q ss_pred HHHhhhhhhh
Q 010538 491 NRCSSFDFVN 500 (508)
Q Consensus 491 l~~~~~~~~~ 500 (508)
+++.+.+.++
T Consensus 402 ~~~~l~~~l~ 411 (412)
T TIGR02407 402 GLDILEQAVE 411 (412)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 302
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.57 E-value=5.9e-12 Score=130.50 Aligned_cols=321 Identities=15% Similarity=0.085 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccC
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVD 165 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~ 165 (508)
+.+.++.+++++|.+. ++.|+++|.|++++.. +..++|++| +...|..... ......|+...-+..++-.+
T Consensus 80 ~~~LE~~vAe~lG~e~----aV~v~sGTaAl~ll~~-l~v~pGd~V--p~n~~f~Tt~--ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 80 FYHLEETVQEYYGFKH----VVPTHQGRGAENLLSR-IAIKPGQYV--PGNMYFTTTR--YHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred HHHHHHHHHHHHCCCe----EEEeCCHHHHHHHHHH-hCCCCcCEE--CCccchHhhH--HHHHhCCcEEEeeecccccc
Confidence 5667899999999973 6899999999998754 447888865 3333322211 11344577544443221000
Q ss_pred ccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCC-ccccC---HHHHHHHHcCCccccccCCCCC
Q 010538 166 NDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFS-GSRFN---LDLINIMKKNPERILEISPFSK 241 (508)
Q Consensus 166 ~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~t-G~~~~---i~~i~~l~~~~~~~~~~~~~~~ 241 (508)
.. +.-+.....|+++++ ++|.+. ..+++.++.+...+|.. |...| ++++.++|++
T Consensus 151 ~~-----~~~p~tgnlD~d~Le--~~I~~~--~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~------------ 209 (460)
T PRK13237 151 AQ-----SDHPFKGNVDLDKLQ--ALIDEV--GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK------------ 209 (460)
T ss_pred cc-----cCCCCCCCcCHHHHH--HHhccc--cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH------------
Confidence 00 000111233799999 777532 12456667666667777 67775 5677777776
Q ss_pred CCeEEEEeccccCCC-----------CCCCCC----C--CCCcEEEEeccccccCCCcceEEEEech-hHhhhccccccC
Q 010538 242 GRWMVLIDAAKGCVT-----------QPPDLS----K--YPVDFVVMSFYKIFGYPTGLGALIMRND-AAKLLKNTYFSG 303 (508)
Q Consensus 242 ~g~~vivD~a~~~g~-----------~~~d~~----~--~~~D~~~~S~~K~~g~P~G~G~l~~~~~-~~~~l~~~~~g~ 303 (508)
+|+.||.|+++.+|. ...++. + ...|.+++|+||.++.|.| |++..+++ +.++++....-.
T Consensus 210 ~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~ 288 (460)
T PRK13237 210 HGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVY 288 (460)
T ss_pred cCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhcccc
Confidence 999999999998872 222221 1 1479999999997776766 88888764 444444331110
Q ss_pred ceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEE
Q 010538 304 GTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTI 383 (508)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~ 383 (508)
+.....|..+.-.+.+++.++....+ ....++-....+||.+.|.+. |+.+
T Consensus 289 -------------------eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~-------Gvpv 339 (460)
T PRK13237 289 -------------------EGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAA-------GVPI 339 (460)
T ss_pred -------------------CCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHC-------CCce
Confidence 00001222222335566655554322 255556667889999999886 7989
Q ss_pred ecCCCCCcccCCCCceEEEEe----eCCCCCccCHHHHHHHH-hhCCCeec-cCCCCCchHHHhhcCCChhhhhhhhhcC
Q 010538 384 YGTYTSEVSYHDTGSMVSFNL----KRPDGSWFGYREVEKLA-SLSGIQLR-TGCFCNPGACAKYLGLSHSDLLSNIEAG 457 (508)
Q Consensus 384 ~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~~l~~~L-~~~gI~v~-~g~~~~~~~~~~~~~~~~s~~~~~~~~~ 457 (508)
+.|.+ ++-+.++. ++.+..++....+...| .+.||.-. -|+......
T Consensus 340 ~~p~g--------gH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~------------------- 392 (460)
T PRK13237 340 VEPVG--------GHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRD------------------- 392 (460)
T ss_pred ecCCC--------ceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccC-------------------
Confidence 87754 67777763 45555555555555444 67788743 222211110
Q ss_pred CccCCCccccCCC--C--CceEEEecC-CCCCHHHHHHHHHhhhhhhhh
Q 010538 458 HVCWDDNDIIHGK--P--TGAIRVSFG-YMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 458 ~~~~~~~~~~~~~--~--~~~iRis~~-~~~t~eev~~l~~~~~~~~~~ 501 (508)
++ +++ . -..+|+++. ---|.+.+|.+++.+..+.+.
T Consensus 393 -----~~---~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 393 -----PK---TGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred -----CC---CCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 00 011 1 257999987 334889999999998877543
No 303
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=1e-12 Score=132.74 Aligned_cols=166 Identities=16% Similarity=0.119 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCcc
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~ 164 (508)
...+.+.++.+-|++.. ++ .+++..|+..++..+ .+.|+.|++...-|......++ ...+.|++...++.+.
T Consensus 79 ~~~le~~iaal~ga~~~---l~-fsSGmaA~~~al~~L-~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~-- 151 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAHA---LL-FSSGMAAITVALLHL-LPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDD-- 151 (409)
T ss_pred hHHHHHHHHHHhCCceE---EE-ecccHHHHHHHHHHh-cCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhh--
Confidence 45567889999998754 44 455555888888877 5888999988877777766654 5567899999988753
Q ss_pred CccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCe
Q 010538 165 DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRW 244 (508)
Q Consensus 165 ~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~ 244 (508)
++.++ +++ .++|++|++.++.||+..+.|+++|.++||+ +|+
T Consensus 152 ------------------~~~~~--~~i------~~~t~~V~~ESPsNPll~v~DI~~l~~la~~------------~g~ 193 (409)
T KOG0053|consen 152 ------------------LKKIL--KAI------KENTKAVFLESPSNPLLKVPDIEKLARLAHK------------YGF 193 (409)
T ss_pred ------------------HHHHH--Hhh------ccCceEEEEECCCCCccccccHHHHHHHHhh------------CCC
Confidence 45556 333 5689999999999999999999999999998 999
Q ss_pred EEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEe-chhHhhhc
Q 010538 245 MVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMR-NDAAKLLK 297 (508)
Q Consensus 245 ~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~-~~~~~~l~ 297 (508)
+|+||.+-+.+ .-.+.-..|+|+++.|..|+++|-.- .|.++++ +++..+++
T Consensus 194 ~vvVDnTf~~p-~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~ 248 (409)
T KOG0053|consen 194 LVVVDNTFGSP-YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLK 248 (409)
T ss_pred EEEEeCCcCcc-cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHH
Confidence 99999998766 33555566899999999999994433 4777775 55554443
No 304
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=8.9e-13 Score=128.83 Aligned_cols=354 Identities=16% Similarity=0.080 Sum_probs=228.3
Q ss_pred CCCCCCCHHHHHHHHHHhhcccc--CCCCCccchhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEc--CChHHHHHHHHh
Q 010538 47 AGATLYSELQMEAIFRDFTTNVY--GNPHSQSDISLATCDIVRA-AREQVLDYFNASMKDYKCIFT--SGATAALKLVGE 121 (508)
Q Consensus 47 ~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t--~g~t~al~~~~~ 121 (508)
++-...+..|++++ -..+.+.| +.|+..|+.|.++.+..+. ++++..+.|+++|+. +-+-+ -+++-|+-.+..
T Consensus 47 aSENFts~aVmeAl-GS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~k-WGVNVQp~SGSPANfavYt 124 (477)
T KOG2467|consen 47 ASENFTSRAVMEAL-GSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEK-WGVNVQPYSGSPANFAVYT 124 (477)
T ss_pred ecccchHHHHHHHH-hHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHH-CceeeccCCCCchhhHHHh
Confidence 45556677888876 44556665 6788888888888777776 666788999998874 32222 355668888999
Q ss_pred hcCCCCCCeEEEecccccchH---HHHHHHHhcCCeEEE-----Ecc--CC-ccCccccccccccccccccchhhhhcCC
Q 010538 122 AFPWSHQSSYMYTMENHNSVL---GIREYALSQGAAAFA-----IDV--EE-AVDNDGLSESLVTSTKISLLPIQRRKGA 190 (508)
Q Consensus 122 ~l~~~~g~~vl~~~~~h~s~~---~~~~~~~~~G~~v~~-----v~~--~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~ 190 (508)
++ .+++++|+--+.-|...+ ..... ..+.... .|. +. .+.+ |.+++++
T Consensus 125 al-l~Ph~RiMGLDLP~GGHLsHGy~T~~---kkISa~SiyFeSmPYkv~~~TG~I---------------DYD~Le~-- 183 (477)
T KOG2467|consen 125 AL-LKPHERIMGLDLPSGGHLSHGYQTPT---KKISATSIYFESMPYKVDPSTGYI---------------DYDKLEK-- 183 (477)
T ss_pred hh-cCCCCeeeeccCCCCCccccccccCC---ceeeeeeeecccCceeeCCCCCce---------------ehHHHHH--
Confidence 98 788899887654443322 11110 1111111 122 32 3445 5778873
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-----CCCCCCCCCCCC
Q 010538 191 SFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-----CVTQPPDLSKYP 265 (508)
Q Consensus 191 ~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-----~g~~~~d~~~~~ 265 (508)
. +..=++++++.- .+..-..+|...+.++|.+ .|++++.|.+|- .|.+|-++..
T Consensus 184 ~-----A~~frPk~iiaG--~SaY~R~~DYaR~R~Iad~------------~gA~Lm~DMAHISgLVAA~vipsPFey-- 242 (477)
T KOG2467|consen 184 T-----ATLFRPKLIIAG--TSAYSRLIDYARFRKIADK------------VGAYLMADMAHISGLVAAGVIPSPFEY-- 242 (477)
T ss_pred H-----HHhcCCcEEEec--cccchhhccHHHHHHHHHh------------cCceeehhhhhHHHHHhcccCCCcccc--
Confidence 2 123356777643 3455678999999999998 899999999985 4566666664
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEec-ccchhhhhhccCccccccCCCCChhHHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAAS-IADIDFVKRRQGVEELFEDGTASFLSIASIRHGFN 344 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~ 344 (508)
+|+++++.||.+-||.| |+++.++.... ..+. .+..+.+. .+...|.. --... |.|.-..+.+++.||+
T Consensus 243 ~DiVTTTTHKsLRGPRg-~mIFyRkGvk~-~~~k--~g~~i~ydlE~kINfaV-----FP~lQ-GGPHNhtIaalAvALk 312 (477)
T KOG2467|consen 243 CDIVTTTTHKSLRGPRG-AMIFYRKGVKS-IKPK--QGKEILYDLEDKINFAV-----FPGLQ-GGPHNHTIAALAVALK 312 (477)
T ss_pred cceeeccccccccCCcc-eeEEEeccCCc-CCCC--CCCcceechhhhhhhhc-----ccccc-CCCCcchHHHHHHHHH
Confidence 99999999998777997 88888775421 1111 01111111 11111110 11122 3444466889999998
Q ss_pred HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhC
Q 010538 345 LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLS 424 (508)
Q Consensus 345 ~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~ 424 (508)
.-..-.+...++++.++++.|.+.|.+. |+++++..++ .++|.+++... .++...+.+.|+.-
T Consensus 313 Qa~tpefk~Yq~qV~~Nakala~~l~~~-------Gy~lvtgGTD-------nHlvLvDLr~~---G~dGarvE~vle~~ 375 (477)
T KOG2467|consen 313 QAMTPEFKEYQKQVLKNAKALASALISR-------GYKLVTGGTD-------NHLVLVDLRPK---GVDGARVEKVLELC 375 (477)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHc-------CceEecCCcc-------ceEEEEecccc---CCchHHHHHHHHHh
Confidence 7666678999999999999999999887 8999987665 67777776532 14445588888887
Q ss_pred CCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC----HHHHHHHHHhhhhhhh
Q 010538 425 GIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST----FEDAKVNRCSSFDFVN 500 (508)
Q Consensus 425 gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t----~eev~~l~~~~~~~~~ 500 (508)
+|...--. |.... ....++.||+..-..+| ++|.+++++.|..-++
T Consensus 376 ~I~~NKNt-vpGD~-----------------------------Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 376 HIALNKNT-VPGDK-----------------------------SALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred hhhhcCCc-CCCCc-----------------------------cccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 88754322 11111 12358899998776664 6777777777666555
Q ss_pred h
Q 010538 501 F 501 (508)
Q Consensus 501 ~ 501 (508)
+
T Consensus 426 i 426 (477)
T KOG2467|consen 426 I 426 (477)
T ss_pred H
Confidence 4
No 305
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=8.1e-13 Score=139.89 Aligned_cols=352 Identities=11% Similarity=0.075 Sum_probs=207.4
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.+++. .... .+.+. ......++.+++++++....+ .+.|++++
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~-~l~~--~~~~~----~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 150 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLA-KQPL--HSQEL----LDPLRAMLAKTLAALTPGKLK--YSFFCNSG 150 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHh-hCcc--ccccc----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 5778899743 35557889888766543 2211 11111 123345556667777654445 79999999
Q ss_pred HHHHHHHHhhcC-CC---CCCeEEEecccccc-hHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhh
Q 010538 113 TAALKLVGEAFP-WS---HQSSYMYTMENHNS-VLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRR 187 (508)
Q Consensus 113 t~al~~~~~~l~-~~---~g~~vl~~~~~h~s-~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~ 187 (508)
|+|+..++.... .. ....||.....|-. ..............-...|.-..... .+ -.|.+.++
T Consensus 151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~--------~~---~~d~~~l~ 219 (459)
T PRK11522 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRH--------VP---FGNIEAMR 219 (459)
T ss_pred hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcc--------cC---CCCHHHHH
Confidence 999988776442 11 13456666543333 22222211000000000111000000 00 01344444
Q ss_pred cCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCCC----
Q 010538 188 KGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQP---- 258 (508)
Q Consensus 188 ~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~~---- 258 (508)
+.+++.....+++..|++..+....|.+.| ++++.++|++ +|+++|+|++|. +|..-
T Consensus 220 --~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~------------~g~llI~DEV~tG~GRtG~~~a 285 (459)
T PRK11522 220 --TALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE------------FGALLILDEVQTGMGRTGKMFA 285 (459)
T ss_pred --HHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEeccceecCCccchhhh
Confidence 433211112356788999999999999998 7788888887 999999999985 33211
Q ss_pred CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC--ChhH
Q 010538 259 PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA--SFLS 335 (508)
Q Consensus 259 ~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~ 335 (508)
.+......|+++++ |.+|+- ..+|.++++++..+.+... . ....+|. |...
T Consensus 286 ~e~~gv~PDivt~g--K~lggG~~Pigav~~~~~i~~~~~~~-----------------------~-~~~~~T~~gnp~~ 339 (459)
T PRK11522 286 CEHENVQPDILCLA--KALGGGVMPIGATIATEEVFSVLFDN-----------------------P-FLHTTTFGGNPLA 339 (459)
T ss_pred hhccCCCCCEEEec--hhhhCCCccceeEEEcHHHHHHhccC-----------------------C-cccCCCCCCCHHH
Confidence 11112247888664 977731 1178999988876543211 0 0112333 5666
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEE-EecCCCCCcccCCCCceEEEEeeCCCCCccCH
Q 010538 336 IASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCT-IYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGY 414 (508)
Q Consensus 336 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 414 (508)
.++..++++.+.+ +++.++..++.++|.+.|+++.. ... ++..-.. .+.++.+.+.+.+. .
T Consensus 340 ~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~~i~~VrG------~Gl~~giel~~~~~----~ 401 (459)
T PRK11522 340 CAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLAR-----EYPDLVQEARG------KGMLMAIEFVDNEI----G 401 (459)
T ss_pred HHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHH-----hCCCceeeEEe------ceeEEEEEecCchH----H
Confidence 7777778888765 35778999999999999987621 111 1111111 26788888754311 2
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
..+.+.|.++||.+.+.. . ....+|+.+....|++|++++++.
T Consensus 402 ~~i~~~l~~~Gvl~~~~~---~----------------------------------~~~~lr~~Ppl~~t~~~id~~l~~ 444 (459)
T PRK11522 402 YNFASEMFRQRVLVAGTL---N----------------------------------NAKTIRIEPPLTLTIEQCEQVLKA 444 (459)
T ss_pred HHHHHHHHHCCeEEEecC---C----------------------------------CCCEEEEECCccCCHHHHHHHHHH
Confidence 347788888999986421 0 147899999999999999999999
Q ss_pred hhhhhhhhhhc
Q 010538 495 SFDFVNFSQFL 505 (508)
Q Consensus 495 ~~~~~~~~~~~ 505 (508)
+.+.++-+...
T Consensus 445 l~~~l~~~~~~ 455 (459)
T PRK11522 445 ARKALAAMRVS 455 (459)
T ss_pred HHHHHHHHHHh
Confidence 99887665543
No 306
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.56 E-value=1.7e-12 Score=122.89 Aligned_cols=349 Identities=15% Similarity=0.136 Sum_probs=230.6
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCC-C---ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEc-CChH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPH-S---QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFT-SGAT 113 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t-~g~t 113 (508)
+..+.|..+ ...+|.+|+..+.++++. |.+.+ + ....+.....+++.+...+.+++++|.. |+|+|. .|+|
T Consensus 6 ~~vvnFaaG-PAklp~~VL~e~qkdl~n--~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn-~~vlf~QGGGt 81 (370)
T KOG2790|consen 6 ERVVNFAAG-PAKLPESVLLEAQKDLLN--FNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDN-YKVLFLQGGGT 81 (370)
T ss_pred cceeecCCC-cccCCHHHHHHHHHHhhc--cCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCc-eeEEEEeCCCc
Confidence 456677644 445688898888777753 22222 1 1233456778899999999999999765 688877 4555
Q ss_pred HHHHHHHhhcC-CCCC---CeEEEecccccchHHHHHHHHhcCCeEEEEc-cCCc--cCccccccccccccccccchhhh
Q 010538 114 AALKLVGEAFP-WSHQ---SSYMYTMENHNSVLGIREYALSQGAAAFAID-VEEA--VDNDGLSESLVTSTKISLLPIQR 186 (508)
Q Consensus 114 ~al~~~~~~l~-~~~g---~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~-~~~~--~~~~~l~~~~~~~~~~~~d~~~l 186 (508)
..+..+...+. .+.| +.|++..... ...+-++++|..-..++ .... +.+ ||.+.+
T Consensus 82 ~qFaAv~lNL~glK~g~~AdYiVTGsWS~----KA~~EAkk~~~~~~V~~~~k~y~ygkv--------------Pd~~~w 143 (370)
T KOG2790|consen 82 GQFAAVPLNLIGLKHGRCADYVVTGSWSA----KAAEEAKKYGTPNIVIPKLKSYTYGKV--------------PDPSTW 143 (370)
T ss_pred ccccccchhhhccccCCccceEEeccccH----HHHHHHHhhCCceEEeccccccccCcC--------------CChhhc
Confidence 54444433332 2333 5677665433 23344556665433333 3222 233 244555
Q ss_pred hcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCC
Q 010538 187 RKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPV 266 (508)
Q Consensus 187 ~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~ 266 (508)
+ .+++.+.|..+...+.-|.-+|.-.+ -. .+|++++.|...-+-..|+|+++ .
T Consensus 144 ~----------~~~da~yvyyCaNETVHGVEf~~~P~---~~------------~~~~vlVaDmSSnflSrpvDvsk--~ 196 (370)
T KOG2790|consen 144 E----------LNPDASYVYYCANETVHGVEFDFIPV---ND------------PKGAVLVADMSSNFLSRPVDVSK--F 196 (370)
T ss_pred c----------cCCCccEEEEecCceeeceecCCCCC---CC------------CCCceEEEecccchhcCCccchh--c
Confidence 5 35666889988888888987775442 12 27999999999999999999998 5
Q ss_pred cEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHH
Q 010538 267 DFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLI 346 (508)
Q Consensus 267 D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 346 (508)
++++++.+|..| |.|+.+++++++++....+..+.- .+|..+ .....-..||+..+++.+.-.++|+
T Consensus 197 gvi~aGAQKN~G-~aG~Tvvivr~dllg~~~~~tP~v---------~dyk~~---~~NnSlyNTpP~f~iy~~~Lv~~~i 263 (370)
T KOG2790|consen 197 GVIFAGAQKNVG-PAGVTVVIVRKDLLGNALDITPSV---------LDYKIM---DKNNSLYNTPPCFGIYVMGLVFEWI 263 (370)
T ss_pred ceEEeccccccC-ccccEEEEEehhhhcccccCCccc---------cceeee---ccccccccCCCeeeeeehhhHHHHH
Confidence 688999999999 999999999999987654432111 111111 1223334688999999999999988
Q ss_pred Hh-cChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCC
Q 010538 347 NS-LTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSG 425 (508)
Q Consensus 347 ~~-~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~g 425 (508)
.+ .|+..+.+...+.++.+.+.+.+.. |+-. .|-.++ .|+-.-|.|++.+. ++....+.+..+++=
T Consensus 264 l~~GGl~a~e~~n~~KskllYd~iD~s~------gfy~-cpVe~~---~RS~MNV~Fri~~d---~Le~eFLkeA~~~~m 330 (370)
T KOG2790|consen 264 LEKGGLAAMEKLNQEKSKLLYDAIDNSN------GFYR-CPVEPS---VRSRMNVPFRIEKD---ELEAEFLKEAAKEHM 330 (370)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHhcC------CeEE-cccchh---hhhhcccceeecch---HHHHHHHHHHHHhhh
Confidence 76 5789999999999999999998863 3322 222221 24467788888642 233333444444333
Q ss_pred CeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 426 IQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 426 I~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+.+. | .+.-|.+|.|+-...+.+++.+|+..|++|.+
T Consensus 331 v~LK-G-------------------------------------hRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 331 VQLK-G-------------------------------------HRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred hccc-c-------------------------------------ccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 3332 2 13468899999999999999999999998865
No 307
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=3.6e-12 Score=134.64 Aligned_cols=358 Identities=11% Similarity=0.072 Sum_probs=207.0
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. |--+|.+.+++.++.. .....+...+ ......++.+++++++.-..+ .+.|++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~-~~~~~~~~~~-----~~~~~~~la~~L~~~~~~~~~--~v~f~~SG 112 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQAD-KLMHGPSGVI-----YYESILKLAEELAEITPGGLD--CFFFSNSG 112 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-hccCcccccc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCcH
Confidence 67889997554 2357888888766542 2111111111 223456677788888743344 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEec-ccccchHHHHHHHH----h---cC---CeEEEEccCCccCc-ccccccccccccc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTM-ENHNSVLGIREYAL----S---QG---AAAFAIDVEEAVDN-DGLSESLVTSTKI 179 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~-~~h~s~~~~~~~~~----~---~G---~~v~~v~~~~~~~~-~~l~~~~~~~~~~ 179 (508)
++|+..++.... ..+...|+... .-|......+.... . .+ ..+..+|....... ... ......
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 188 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGE----DPEVCF 188 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccC----chhHHH
Confidence 999988776532 22334555554 44544444322110 0 00 11233333211000 000 000000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC- 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~- 254 (508)
..+++.++ +.+++ ....+++..|++..+....|.+.| ++++.++|++ ||+++|+|++|+.
T Consensus 189 ~~~~~~l~--~~~~~-~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~------------~g~llI~DEv~tG~ 253 (433)
T PRK08117 189 LECLRDLE--SLFKH-QVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR------------HGILLIFDEVQTGF 253 (433)
T ss_pred HHHHHHHH--HHHHh-ccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEecchhcc
Confidence 01334444 33321 011346889999999999999998 8888888887 9999999999873
Q ss_pred CCC--CCCCCCC--CCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 255 VTQ--PPDLSKY--PVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 255 g~~--~~d~~~~--~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
|.. .+..... ..|+ .++.|.++ + | +|++++++++.+.+.....+. .
T Consensus 254 gr~G~~~~~~~~gv~pDi--~t~sK~lg-~-G~pigav~~~~~i~~~~~~~~~~~------------------------T 305 (433)
T PRK08117 254 GRTGEWFAAQTFGVVPDI--MTIAKGIA-S-GLPLSAVVASKELMEQWPLGSHGT------------------------T 305 (433)
T ss_pred CccccchhHhhcCCCCCE--eehhhhcc-C-CCcceeEEEcHHHHhhccCCCCCC------------------------C
Confidence 111 1111122 3566 46679888 4 4 799999988876553221100 0
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD 408 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 408 (508)
.+.|...+++..++++.+.+ +.+.+++.++.+++.+.|+++.. ...++.... -.+.++.+.+.+.+
T Consensus 306 ~~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~~~~vr------g~Gl~~gi~~~~~~ 371 (433)
T PRK08117 306 FGGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKE-----KHPVIGDVR------GIGLMIGIEIVDPD 371 (433)
T ss_pred CCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----cCCceeeee------cCCcEEEEEEecCC
Confidence 12355667777778887654 35677888888999888877521 111111111 12556666664322
Q ss_pred C--CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 409 G--SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 409 ~--~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
. ..-....+.+.+.++||.+.+.. . ..+.+|+++...+|.+
T Consensus 372 ~~~~~~~~~~~~~~l~~~Gv~~~~~g---~----------------------------------~~~~lRl~p~~~~t~~ 414 (433)
T PRK08117 372 GEPDGDAVEKILDKCLEKGLLFYLCG---N----------------------------------AGNVLRMIPPLTVTKE 414 (433)
T ss_pred CCcchHHHHHHHHHHHHCCCEEeecC---C----------------------------------CCCEEEEeCCccCCHH
Confidence 1 11112346778888999875410 0 1468999999999999
Q ss_pred HHHHHHHhhhhhhhhh
Q 010538 487 DAKVNRCSSFDFVNFS 502 (508)
Q Consensus 487 ev~~l~~~~~~~~~~~ 502 (508)
||+++++.+.+.++-+
T Consensus 415 ~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 415 EIDEGLDILDEALTEY 430 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998877543
No 308
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.55 E-value=2.4e-15 Score=149.44 Aligned_cols=253 Identities=15% Similarity=0.138 Sum_probs=165.8
Q ss_pred CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeE
Q 010538 52 YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSY 131 (508)
Q Consensus 52 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~v 131 (508)
++|.+++++.+.... +. ++.......++++.+++++|.+. .+|++++|.|+.++++++. ++++.|
T Consensus 7 ~~~~m~~a~~~a~~g----d~------~Yg~D~~~~~l~~~i~~l~g~e~----a~f~~sGT~An~~al~~~~-~~~~~v 71 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG----DD------AYGEDPTTARLEERIAELFGKEA----ALFVPSGTMANQLALRAHL-RPGESV 71 (290)
T ss_dssp S-HHEEHHHHHTTSB-----C------CTTSSHHHHHHHHHHHHHHTSSE----EEEESSHHHHHHHHHHHHH-HTTEEE
T ss_pred CCHHHHHHHHccccC----Cc------ccCCChhHHHHHHHHHHHcCCCE----EEEeCCCChHHHHHHHHHH-hcCCce
Confidence 678888887442211 11 22345668889999999999974 4699999999999999995 889999
Q ss_pred EEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCC
Q 010538 132 MYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSEC 211 (508)
Q Consensus 132 l~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~ 211 (508)
++....|......-......|.++..++.+..+.+ ++++++ +++.+.....+++++|+++..+
T Consensus 72 i~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l---------------~~~~l~--~~~~~~~~h~~~~~~v~le~t~ 134 (290)
T PF01212_consen 72 ICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKL---------------TPEDLE--AAIEEHGAHHPQPAVVSLENTT 134 (290)
T ss_dssp EEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB----------------HHHHH--HHHHHHTGTSGGEEEEEEESSB
T ss_pred eccccceeeeeccchhhHhcCcEEEECCCcccCCC---------------CHHHHH--HHhhhccccCCCccEEEEEecC
Confidence 99988776554432222347999999988765777 688888 6664422234679999999977
Q ss_pred CCC-ccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc------CCCCCCCCCCCCCcEEEEeccccccCCCcce
Q 010538 212 NFS-GSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG------CVTQPPDLSKYPVDFVVMSFYKIFGYPTGLG 284 (508)
Q Consensus 212 n~t-G~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~------~g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G 284 (508)
+.. |+++++++|.++++ +|+++|+.+++||+-- .+..+-++. ..+|.+++|++|.+|.|.| +
T Consensus 135 ~~~GG~~~s~~el~ai~~---------~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~G-a 203 (290)
T PF01212_consen 135 ELAGGTVYSLEELRAISE---------LAREHGLPLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGG-A 203 (290)
T ss_dssp TTTTSB---HHHHHHHHH---------HHHHHT-EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSE-E
T ss_pred cCCCCeeCCHHHHHHHHH---------HHHhCceEEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccc-e
Confidence 754 99999888888777 6777999999999842 233333333 2699999999998886765 8
Q ss_pred EEEEechhHhhhcccc--ccCceEEecccchhhhhhccCccccccCCCCChhHHHH--HHHHHHHHHhcChHHHHHHHHH
Q 010538 285 ALIMRNDAAKLLKNTY--FSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIAS--IRHGFNLINSLTVPAICRHIAS 360 (508)
Q Consensus 285 ~l~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--l~~al~~~~~~g~~~i~~~~~~ 360 (508)
+|+++++++++..... .|++. ...| ++.... ...++..+ +.+ .....+-.+
T Consensus 204 vl~~~~~~i~~~~~~~k~~gg~~--------------------~~~G---~~~a~~~~~~~~l~~l-~~~-~~~~~~~~~ 258 (290)
T PF01212_consen 204 VLAGNKEFIAKARRQRKRLGGGM--------------------RQAG---VLAAAELYQFAALRAL-ELW-LERARHANA 258 (290)
T ss_dssp EEEESHHHHHHHHHHHHHHTHHH--------------------HHTT---HHHHHHHHHHHHHCHE-ECS-HHHHHCHHH
T ss_pred EEEechHHHHHHHHHHHHhccCe--------------------eecc---eeeeechhhHHHHHHH-Hhh-HHHHHHHHH
Confidence 8889998766433221 12110 0111 111100 11222221 222 556677788
Q ss_pred HHHHHHHHHhcc
Q 010538 361 LGMYVRKVLLSL 372 (508)
Q Consensus 361 l~~~l~~~L~~l 372 (508)
.+++|.+.|+.+
T Consensus 259 ~A~~La~~l~~~ 270 (290)
T PF01212_consen 259 MAKRLAAGLEAL 270 (290)
T ss_dssp HHHCHHHCHHEE
T ss_pred HHHHHHHHHHHC
Confidence 899999999998
No 309
>PLN00144 acetylornithine transaminase
Probab=99.55 E-value=2.3e-12 Score=133.82 Aligned_cols=337 Identities=12% Similarity=0.058 Sum_probs=193.5
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.++.. .. ......+. .....++-+++++..+ .+ .+.|++++
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~-~~~~~~~~-----~~~~~~la~~l~~~~~--~~--~v~f~~sG 81 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAG-TL-AHVSNVYH-----TIPQVELAKRLVASSF--AD--RVFFCNSG 81 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHH-hc-CCcccccc-----CHHHHHHHHHHHhcCC--CC--eEEEeCCc
Confidence 6788999733 34558888888766553 21 11111111 1223344455556543 34 79999999
Q ss_pred HHHHHHHHhhcC-CC-------C------CCeEEEeccc-ccchHHHHHHHHhcCCeEEEEccCCccCcccccccccccc
Q 010538 113 TAALKLVGEAFP-WS-------H------QSSYMYTMEN-HNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTST 177 (508)
Q Consensus 113 t~al~~~~~~l~-~~-------~------g~~vl~~~~~-h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~ 177 (508)
|+|+..++.... .. + ..+|+..... |................-...|....... .+
T Consensus 82 seA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~--------~~- 152 (382)
T PLN00144 82 TEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTF--------VE- 152 (382)
T ss_pred HHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEE--------eC-
Confidence 999987766431 11 0 2456665543 33333322211000000000010000000 00
Q ss_pred ccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc
Q 010538 178 KISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG 253 (508)
Q Consensus 178 ~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~ 253 (508)
-.|++.++ +.+. ..+++.|++..++++.|...+ .++|.++|++ ||+++|+|++++
T Consensus 153 --~~d~~~l~--~~~~-----~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~------------~g~llI~DEv~t 211 (382)
T PLN00144 153 --YGNLEAAR--KLIQ-----KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDE------------AGALLVFDEVQC 211 (382)
T ss_pred --CCCHHHHH--HhcC-----CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEechhh
Confidence 01467777 5553 245678888777888444332 4455666665 999999999987
Q ss_pred C-CCCC--C--CCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccccc
Q 010538 254 C-VTQP--P--DLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE 327 (508)
Q Consensus 254 ~-g~~~--~--d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (508)
. |... + +......|+ .++.|.++ |+ -+|++++++++.+.+.+...+ .
T Consensus 212 g~gr~g~~~~~~~~~~~PDi--~t~sK~l~-~G~pig~v~~~~~~~~~~~~~~~~------------------------~ 264 (382)
T PLN00144 212 GLGRTGYLWAHEAYGVEPDI--MTLAKPLA-GGLPIGAVLVTEKVASAINPGDHG------------------------S 264 (382)
T ss_pred CCCccchHhhhhhcCCCCCE--EEeccccc-CCcceEEEEEcHHHHhccCCCCCC------------------------C
Confidence 3 2221 1 233445784 45569887 52 189999998887665542111 0
Q ss_pred CCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcccCCCCceEEEEeeC
Q 010538 328 DGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSYHDTGSMVSFNLKR 406 (508)
Q Consensus 328 ~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 406 (508)
....+....++..++++++.+ ..+.+++.++.+++.+.|+++.. ..+.+ .+.+ .+.++++.+.
T Consensus 265 T~~~~pl~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~~~~--~~~~~~~vrg----------~G~~~~l~l~- 328 (382)
T PLN00144 265 TFAGGPLVCNAALAVLDKISK---PGFLASVAKKGEYLRELLRRKLG--GNPHVKEVRG----------VGLLVGIQLD- 328 (382)
T ss_pred CCCCCHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHHHh--hCCCceeeec----------CceEEEEEec-
Confidence 112344556666778888865 45567777777777777765411 00111 1111 2788888883
Q ss_pred CCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 407 PDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 407 ~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
... ..+...+.++||.+.++. ..+.||+++..-.|++
T Consensus 329 ~~~-----~~~~~~~~~~Gv~i~~~~--------------------------------------~~~~lrl~p~~~~~~~ 365 (382)
T PLN00144 329 VPA-----GPLVDACRDSGLLVLTAG--------------------------------------KGDVVRLVPPLVISEA 365 (382)
T ss_pred Ccc-----HHHHHHHHHCCeEEeecC--------------------------------------CCCEEEEeCCCccCHH
Confidence 222 347888889999997641 1368999999888899
Q ss_pred HHHHHHHhhhhhhhhh
Q 010538 487 DAKVNRCSSFDFVNFS 502 (508)
Q Consensus 487 ev~~l~~~~~~~~~~~ 502 (508)
|++.+++.+.+.+..+
T Consensus 366 ~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 366 ELEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999887543
No 310
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.54 E-value=3e-12 Score=134.95 Aligned_cols=350 Identities=13% Similarity=0.045 Sum_probs=191.3
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. |..+|.+++++.++.. +.. . +.. ......++++++++++... + .|.|++|+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~~---~--~~~---~~~~~~~lae~l~~~~~~~-~--~v~~~~sG 113 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE-RGT---S--YGA---PTEAEILLAKEIISRVPSV-E--MVRFVNSG 113 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHH-hCC---c--CCC---CCHHHHHHHHHHHHhCCcc-c--EEEEeCCH
Confidence 67889997442 4567889888766543 211 1 110 1234567788888887653 4 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
++|+..++.... ..++++||+....|.....+.......+......|..... ...... .....--.|+++++ +.
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~d~~~l~--~~ 188 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGV-PEDFAK--LTLVLPYNDLEALE--EV 188 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCC-Cccccc--ceEEeCCCCHHHHH--HH
Confidence 999998776531 2455788877755555432222111111111111111000 000000 00000001466776 55
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC--C--CCCCC
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ--P--PDLSK 263 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~--~--~d~~~ 263 (508)
+.+. .++++.|++....+.+|.+.| +++|.++|++ +|+++|+|++|..-.. . .....
T Consensus 189 i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~------------~~~llI~DEv~~g~r~g~~~~~~~~~ 253 (423)
T TIGR00713 189 FEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEE------------YGSLLIFDEVMTGFRVALGGAQEYFG 253 (423)
T ss_pred HHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHH------------hCCEEEEEccccccccCcchhHHHhC
Confidence 5321 256788888655555899988 4566666665 9999999999853211 0 11112
Q ss_pred CCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHH
Q 010538 264 YPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRH 341 (508)
Q Consensus 264 ~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 341 (508)
...|++ +++|.++ + | +|++++++++.+.+.+. +. .........+...+++..+
T Consensus 254 ~~pDi~--t~sK~l~-~-G~pig~v~~~~~i~~~~~~~--~~-------------------~~~~~T~~~~~~~~aaa~a 308 (423)
T TIGR00713 254 VEPDLT--TLGKIIG-G-GLPVGAFGGRREIMERLAPE--GP-------------------VYQAGTLSGNPLAMAAGLA 308 (423)
T ss_pred CCcchh--hhhhhhc-C-CCceeeeeEHHHHHHhhCcC--CC-------------------eeeccCCCCCHHHHHHHHH
Confidence 235755 5779888 4 4 79999999887766531 00 0000111245555666667
Q ss_pred HHHHHHhcC-hHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC------ccC-
Q 010538 342 GFNLINSLT-VPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS------WFG- 413 (508)
Q Consensus 342 al~~~~~~g-~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~- 413 (508)
+++.+.+.+ .+...+....+++.|.+.+++... ...+.+ .+.++.+.+...... ..+
T Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~v~~----------~g~~~~v~~~~~~~~~~~~~~~~~~ 373 (423)
T TIGR00713 309 TLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGI-----PHTVNR----------VGSMFSLFFTEEEVTNYADAKKSDT 373 (423)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEe----------eccEEEEEEecCCCCChhhhhcccH
Confidence 888776532 233344444444444444444310 011111 156666655421100 001
Q ss_pred --HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHH
Q 010538 414 --YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVN 491 (508)
Q Consensus 414 --~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l 491 (508)
...+.+.|.++||.+..+. .+.+|+++. .|.+|++.+
T Consensus 374 ~~~~~~~~~l~~~Gv~v~~~~---------------------------------------~~~~~l~~~--~t~~~i~~~ 412 (423)
T TIGR00713 374 ELFAKFFHEMLDKGVFLPPSQ---------------------------------------FEACFLSAA--HTEEDIENT 412 (423)
T ss_pred HHHHHHHHHHHHCCeEEecCC---------------------------------------ccceeeECC--CCHHHHHHH
Confidence 1246667778999986421 245788875 699999999
Q ss_pred HHhhhhhhhh
Q 010538 492 RCSSFDFVNF 501 (508)
Q Consensus 492 ~~~~~~~~~~ 501 (508)
++.+.++++.
T Consensus 413 ~~~l~~~l~~ 422 (423)
T TIGR00713 413 IEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHhh
Confidence 9999887653
No 311
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.53 E-value=1.6e-11 Score=129.33 Aligned_cols=351 Identities=12% Similarity=0.076 Sum_probs=198.0
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCC-CCceEEE-cC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASM-KDYKCIF-TS 110 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~~i~~-t~ 110 (508)
++.-|+|..+ .|--+|.+.+++.+++..... .+.... ......++-+++++.+..+. .+..+.| ++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~~~----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 110 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI--THGLDM----HTTAKREFLETFEETILKPRGLDYKVQFTGP 110 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccc--cccccc----CcHHHHHHHHHHHHhhcCCcCCCceEEEeCC
Confidence 7888999743 355588898887665532111 111100 11233445556666543221 1114666 48
Q ss_pred ChHHHHHHHHhhcC-CCCCCeEEEecccccc-hHHHHHHHH----h--cC---CeEEEEccCCccCcccccccccccccc
Q 010538 111 GATAALKLVGEAFP-WSHQSSYMYTMENHNS-VLGIREYAL----S--QG---AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 111 g~t~al~~~~~~l~-~~~g~~vl~~~~~h~s-~~~~~~~~~----~--~G---~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
++++|+..++.... ..+..+||.....|-+ ......... + .+ ..+..+|......-+
T Consensus 111 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------------ 178 (425)
T PRK09264 111 TGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGD------------ 178 (425)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccc------------
Confidence 99999988766542 2344566666543333 332222110 0 11 123334432100000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-C
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-C 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~ 254 (508)
..|++.++ +.+.+.....+++..|++..+....|.+.+ +++|.++|++ ||+++|+|++|+ +
T Consensus 179 ~~~~~~l~--~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~------------~g~llI~DEV~tG~ 244 (425)
T PRK09264 179 VDTLAYLE--KLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRK------------HDILLIVDDIQAGC 244 (425)
T ss_pred hhHHHHHH--HHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHH------------cCcEEEEechhhCC
Confidence 01345566 555321111246788999888888887653 5566666665 999999999986 2
Q ss_pred CCC----CCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 255 VTQ----PPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 255 g~~----~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
|.. ..+......|++++| |.++ +.| +|++++++++ ..+.+...+ ..
T Consensus 245 GrtG~~~~~~~~~v~PDi~t~~--K~l~-~~G~pigav~~~~~i-~~~~~~~~~------------------------~T 296 (425)
T PRK09264 245 GRTGTFFSFERAGITPDIVTLS--KSIS-GYGLPMALVLIKPEL-DVWKPGEHN------------------------GT 296 (425)
T ss_pred ccccHHHHHhhcCCCCCEEEec--cccC-CCccceEEEEEchhh-hccCCCccC------------------------CC
Confidence 211 112223357887665 9888 656 6999998775 222221100 01
Q ss_pred CCCChhHHHHHHHHH-HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC
Q 010538 329 GTASFLSIASIRHGF-NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP 407 (508)
Q Consensus 329 gt~~~~~~~~l~~al-~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 407 (508)
.+.|..+.++..+++ +++.+ .++.++++++.++|.+.|+++.. ..+.+ +....+ .+.++++.+++.
T Consensus 297 ~~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~--~~~~~-~~~vrg-------~Gl~~~i~l~~~ 363 (425)
T PRK09264 297 FRGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAA--KYPGL-GAEVRG-------RGMMQGIDFGDG 363 (425)
T ss_pred CCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHH--hCCCc-eeccee-------cccEEEEEecCh
Confidence 123344455555666 44332 46788888999999888876521 00111 111111 267778887542
Q ss_pred CCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHH
Q 010538 408 DGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFED 487 (508)
Q Consensus 408 ~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ee 487 (508)
. ....+.+.+.++||.+.+.. .....||+++.+.+|++|
T Consensus 364 ~----~~~~l~~~~~~~Gv~~~~~~-------------------------------------~~~~~lr~~p~l~~t~~e 402 (425)
T PRK09264 364 E----LAGKIAAEAFENGLIIETSG-------------------------------------PEDEVVKLLPPLTIDEEE 402 (425)
T ss_pred H----HHHHHHHHHHHCCCEEeccC-------------------------------------CCCCEEEEeCCCCCCHHH
Confidence 1 12347788889999986521 014689999999999999
Q ss_pred HHHHHHhhhhhhhhhh
Q 010538 488 AKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 488 v~~l~~~~~~~~~~~~ 503 (508)
|+++++.+.+.++.+.
T Consensus 403 i~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 403 LEEGLDILEEAVAEVL 418 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998876543
No 312
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.53 E-value=5.5e-12 Score=132.76 Aligned_cols=337 Identities=12% Similarity=0.064 Sum_probs=201.2
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .+--+|.+++++.+++. ... ..+.+. ......++.+++++++....+ .+.|++++
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~-~l~--~~~~~~----~~~~~~~lAe~L~~~~p~~~~--~v~f~~SG 143 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLA-KQP--LHSQEL----LDPLRALLAKTLAALTPGKLK--YSFFCNSG 143 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHH-hCC--Cccccc----CCHHHHHHHHHHHHhCCCCcC--EEEEeCCc
Confidence 6788999633 45568999988766543 221 111111 123344556667777654445 79999999
Q ss_pred HHHHHHHHhhcCC----CCCCeEEEeccc-ccchHHHHHHHHh------c---CCeEEEEccCCccCccccccccccccc
Q 010538 113 TAALKLVGEAFPW----SHQSSYMYTMEN-HNSVLGIREYALS------Q---GAAAFAIDVEEAVDNDGLSESLVTSTK 178 (508)
Q Consensus 113 t~al~~~~~~l~~----~~g~~vl~~~~~-h~s~~~~~~~~~~------~---G~~v~~v~~~~~~~~~~l~~~~~~~~~ 178 (508)
++|+..++..... ++...||+.... |............ + ...+..+|..
T Consensus 144 sEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~----------------- 206 (442)
T TIGR03372 144 TESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG----------------- 206 (442)
T ss_pred hHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-----------------
Confidence 9999887764321 134567666543 3333333221100 0 0112223322
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG- 253 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~- 253 (508)
|.+.++ +.+++-....+++..|++..+....|.+.| ++++.++|++ +|+++|+|++|.
T Consensus 207 ---d~~~~~--~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~------------~g~llI~DEV~tG 269 (442)
T TIGR03372 207 ---DIEAML--KALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE------------FGALLILDEVQTG 269 (442)
T ss_pred ---CHHHHH--HHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH------------cCCEEEEeecccC
Confidence 233333 222110011356889999999999999998 7888888887 999999999985
Q ss_pred CCCCCC----CCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 254 CVTQPP----DLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 254 ~g~~~~----d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
+|..-. +......|++++ .|.+|+= ..+|.+++++++.+.+... . ....
T Consensus 270 ~GRtG~~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv~~~~i~~~~~~~-----------------------~-~~~~ 323 (442)
T TIGR03372 270 MGRTGKMFACEHEGVQPDILCL--AKALGGGVMPIGATIATEAVFSVLFDN-----------------------P-FLHT 323 (442)
T ss_pred CCccccchhhhhcCCCCCeeee--hhhhcCCcccceEEEecHHHHHhhhcc-----------------------C-cccc
Confidence 332211 111224788875 5977621 0168888888876554211 0 0011
Q ss_pred CCC--ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeC
Q 010538 329 GTA--SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKR 406 (508)
Q Consensus 329 gt~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 406 (508)
+|. |..+.++..++++.+.+. ++.++.+++.++|++.|+++.. ..+. .+..-.. .+.++.+.+.+
T Consensus 324 ~T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~--~~~~--~i~~vRG------~Gl~~giel~~ 390 (442)
T TIGR03372 324 TTFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAA--EYPD--LIIEARG------KGLLMAIEFRD 390 (442)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHH--hCCC--ceEEEec------ceEEEEEEeCC
Confidence 233 556677777788887663 4667778888888888876520 0010 1111111 27788888754
Q ss_pred CCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 407 PDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 407 ~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
.+ ....+.+.+.++||.+.... + ..+.+|+++....|.+
T Consensus 391 ~~----~~~~i~~~l~~~Gvl~~~~~---~----------------------------------~~~~lr~~Ppl~~t~~ 429 (442)
T TIGR03372 391 NE----IGYAFAKELFQQNILVAGTL---N----------------------------------NAKSIRIEPPLTITIE 429 (442)
T ss_pred hH----HHHHHHHHHHHCCcEEeecC---C----------------------------------CCCEEEEECCcccCHH
Confidence 21 11347788888999986421 0 1468999999999999
Q ss_pred HHHHHHHhhhhh
Q 010538 487 DAKVNRCSSFDF 498 (508)
Q Consensus 487 ev~~l~~~~~~~ 498 (508)
|+|++++++.+.
T Consensus 430 ~id~~~~~l~~~ 441 (442)
T TIGR03372 430 QCALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 313
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.52 E-value=1.2e-12 Score=134.61 Aligned_cols=279 Identities=16% Similarity=0.194 Sum_probs=159.6
Q ss_pred CeeeeCCCCCCCCHHHHHH-HHHHhhccccC--CCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHH
Q 010538 41 TVYLDHAGATLYSELQMEA-IFRDFTTNVYG--NPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALK 117 (508)
Q Consensus 41 ~iyld~~~~~~~~~~~~~a-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~ 117 (508)
.-|+.-++.+-.-|+++.. +... .+++. .|... ..+...-+.+-+....++++.|.+.. ...+-.++|.+-.
T Consensus 67 ~~fiG~G~y~~~~P~~i~~~i~~~--~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdva--NaSlyd~atA~aE 141 (429)
T PF02347_consen 67 TSFIGAGSYTHYVPAVIDRNILSR--PEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVA--NASLYDGATAAAE 141 (429)
T ss_dssp TS---CTTT-----HHHHH-HHCC--HHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE---SEBSSCCHHHHH
T ss_pred CccccccccCceeChhhcCccccC--hhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCcc--CCCCCChhHHHHH
Confidence 3344445544445566655 3321 12221 13221 12344566677899999999999865 4566778887665
Q ss_pred HHHhhcCC--CCCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCC
Q 010538 118 LVGEAFPW--SHQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPE 194 (508)
Q Consensus 118 ~~~~~l~~--~~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~ 194 (508)
.+..+... +.+.+|+++..-||.+...++ ++...|++++.+|.+..+..+
T Consensus 142 a~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------------------------- 194 (429)
T PF02347_consen 142 AMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------------------------- 194 (429)
T ss_dssp HHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB----------------------------
T ss_pred HHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc---------------------------
Confidence 55444432 234599999999999887655 345578999999887544430
Q ss_pred CCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC-CCCCCCCCCCcEEEEec
Q 010538 195 RDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT-QPPDLSKYPVDFVVMSF 273 (508)
Q Consensus 195 ~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~-~~~d~~~~~~D~~~~S~ 273 (508)
++++..|++++++ ..|.+.++++|.+++|+ +|+++++ ++.-... .-....++|+|+++++
T Consensus 195 ----~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~------------~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~- 255 (429)
T PF02347_consen 195 ----DDDTAAVMVQNPN-TFGVFEDIKEIADIAHA------------AGALVIV-GADPNALGGLKSPGEYGADIVVGE- 255 (429)
T ss_dssp ----STTEEEEEEESS--TTSB--THHHHHHHHHH------------TT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-
T ss_pred ----ccCeEEEEeecCC-CCceEeeHHHHHHHHHH------------cCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-
Confidence 3678999999874 67999999999999998 8999887 6542211 1123356799999776
Q ss_pred cccccCCC-----cceEEEEechhHhhhccccccCceEEecccchhhhh--hccCccccccCCCCChh---HHHHHH--H
Q 010538 274 YKIFGYPT-----GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK--RRQGVEELFEDGTASFL---SIASIR--H 341 (508)
Q Consensus 274 ~K~~g~P~-----G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~gt~~~~---~~~~l~--~ 341 (508)
||.||.|. |.|++-+++++...+.-.+.|-.. .......|.. ....+.-+++-.|.|+- .+.++. .
T Consensus 256 ~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~--D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~ 333 (429)
T PF02347_consen 256 HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTK--DADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAI 333 (429)
T ss_dssp CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEE--BCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHH
T ss_pred CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccc--cccccceeeeccccccccccccchhhhhhhhHHHHHHHHHH
Confidence 77665443 389999999987665544443110 0011111111 11122344555666552 233333 2
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHhcc
Q 010538 342 GFNLINSLTVPAICRHIASLGMYVRKVLLSL 372 (508)
Q Consensus 342 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l 372 (508)
-+.++...|+.++.+++..++.|+.+.|++.
T Consensus 334 Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 334 YLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3556677899999999999999999999886
No 314
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.51 E-value=1.9e-11 Score=126.53 Aligned_cols=363 Identities=13% Similarity=0.097 Sum_probs=216.9
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++..|||..+ .+--+|.+++++.++. .... ..+..+.. .+...+.-+++.+++..+ .+ .+.|+++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~-~~~~-h~~~~~~~----~e~~v~~ae~L~~~~p~~~~~--~~~f~~s 125 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQL-AKLN-HTHTRDLY----YEPYVELAEKLTALAPGSGLK--KVFFGNS 125 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHH-HHhh-cccCCccc----chhHHHHHHHHHHhCCcccCC--eEEecCC
Confidence 7899999876 4556899999876644 2221 11222111 123444556666666653 44 7899999
Q ss_pred hHHHHHHHHhhcCC-CCCCeEEEecccc-cchHHHHHHHHh----------cCCeEEEEccCCccCc-cccccccccccc
Q 010538 112 ATAALKLVGEAFPW-SHQSSYMYTMENH-NSVLGIREYALS----------QGAAAFAIDVEEAVDN-DGLSESLVTSTK 178 (508)
Q Consensus 112 ~t~al~~~~~~l~~-~~g~~vl~~~~~h-~s~~~~~~~~~~----------~G~~v~~v~~~~~~~~-~~l~~~~~~~~~ 178 (508)
+++|+..++..... .++..||.....| ......+.+-.. ....|..+|......- -.... ...
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~----~~~ 201 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGG----EEC 201 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCch----hhh
Confidence 99999988765532 3345666665444 333333332111 1123666665421110 00000 000
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CC-
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VT- 256 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~- 256 (508)
-....+.++ ..+.+......++..+++..++...|.+.|.+..-+-+++ +|++||+++|+|++|+. |.
T Consensus 202 ~~~~~~~~e--~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~--------~~~~~gillI~DEVQtG~GRT 271 (447)
T COG0160 202 GDDALEYIE--RALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRK--------LCREHGILLIADEVQTGFGRT 271 (447)
T ss_pred hHHHHHHHH--HHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHH--------HHHHcCCEEEEeccccCCCcc
Confidence 001133344 3332223334578999999999999999985543333333 44459999999999974 21
Q ss_pred -CCCCCCCC--CCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCCh
Q 010538 257 -QPPDLSKY--PVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASF 333 (508)
Q Consensus 257 -~~~d~~~~--~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 333 (508)
.-+.+... ..|++++| |.+|+---+|.++.++++.. ..|-..++ +. .-|.
T Consensus 272 G~~fa~E~~gv~PDivt~a--K~ig~G~Pl~avv~r~ei~~-~~~g~~~~----------------------Tf--~GNp 324 (447)
T COG0160 272 GKMFAFEHFGVEPDIVTLA--KSLGGGLPLSAVVGRAEIMD-WPPGGHGG----------------------TF--GGNP 324 (447)
T ss_pred ccchhhhhcCCCCCEEEec--ccccCCCceeEEeccHHhcc-cCCcccCC----------------------CC--CcCH
Confidence 11222222 47999998 97773111899999998854 33321111 11 1234
Q ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC-CCcc
Q 010538 334 LSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD-GSWF 412 (508)
Q Consensus 334 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~ 412 (508)
.+.++..+.++.+.+ +.+.++..++.++|++.|.++. .....+++-.. ++-++-+.+.... ..+.
T Consensus 325 va~Aaa~AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~-----~~~~~IgdVRG------~Glm~giE~v~d~~t~~p 390 (447)
T COG0160 325 VACAAALAVLDVIEE---ENLLERAAELGEYLRDRLEELQ-----EKHPLIGDVRG------LGLMIGVELVKDRDTKEP 390 (447)
T ss_pred HHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHH-----hhcCceecccc------cceEEEEEEecCCCCCCC
Confidence 456666667776665 4778999999999999998763 23445555433 3677777765321 1111
Q ss_pred C---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHH
Q 010538 413 G---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAK 489 (508)
Q Consensus 413 ~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~ 489 (508)
+ ..++...+.++|+.+.. |.. ..+.+||.+-.-.|.|++|
T Consensus 391 ~~~~~~~i~~~~~~~Glil~~---~G~----------------------------------~~nviRi~PPL~is~e~~d 433 (447)
T COG0160 391 DAELAAKIVARAFERGLLLLT---CGP----------------------------------HGNVLRILPPLTISDEELD 433 (447)
T ss_pred CHHHHHHHHHHHHHcCCEEec---cCC----------------------------------CCcEEEEeCCcccCHHHHH
Confidence 2 24577888899987654 211 2689999999999999999
Q ss_pred HHHHhhhhhhhh
Q 010538 490 VNRCSSFDFVNF 501 (508)
Q Consensus 490 ~l~~~~~~~~~~ 501 (508)
..++.|.+.++.
T Consensus 434 ~~l~il~~al~~ 445 (447)
T COG0160 434 EGLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHHHh
Confidence 999999987754
No 315
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.50 E-value=1.1e-11 Score=124.29 Aligned_cols=349 Identities=13% Similarity=0.080 Sum_probs=222.5
Q ss_pred eeeCCCCCCCCHHHHH-HHHHHhhccccCCCCCccc--hhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHH
Q 010538 43 YLDHAGATLYSELQME-AIFRDFTTNVYGNPHSQSD--ISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLV 119 (508)
Q Consensus 43 yld~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~ 119 (508)
|+..+.....-|+++. .+++. ..|-.....|. .+...-+..-.....++++.|.+-. +-.+--++|.+-..+
T Consensus 79 fiG~GyY~~~~P~vI~rnile~---pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA--NASm~DeaTAaAEAm 153 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILEN---PEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA--NASMLDEATAAAEAM 153 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcC---ccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc--cchhhhhHHHHHHHH
Confidence 4555555555666665 44321 11212222222 1222344455678899999999876 566777888777666
Q ss_pred HhhcCCCC--CCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCC
Q 010538 120 GEAFPWSH--QSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERD 196 (508)
Q Consensus 120 ~~~l~~~~--g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~ 196 (508)
..+....+ .++++++..-||.....++ +++-.|++++.++.++ .+.++ +.
T Consensus 154 ~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d--------------------~~~l~--~~----- 206 (450)
T COG0403 154 LMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADD--------------------LDDLE--SA----- 206 (450)
T ss_pred HHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccch--------------------hhhhh--hc-----
Confidence 66654333 5899999999999988776 4556788998887762 33444 22
Q ss_pred CCCCCceEEEEeCCCCCCc-cccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccc-cCCCCCCCCCCCCCcEEEEecc
Q 010538 197 PAGDAYNLFAFPSECNFSG-SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAK-GCVTQPPDLSKYPVDFVVMSFY 274 (508)
Q Consensus 197 ~~~~~t~lv~~~~~~n~tG-~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~-~~g~~~~d~~~~~~D~~~~S~~ 274 (508)
....+..+++..++ ..| ...+++++.+.+|+ +|++++|=.-- +++. --...++|+|+++++++
T Consensus 207 -~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~------------~~al~~v~aDplaL~L-L~pPGe~GADIvvG~~Q 271 (450)
T COG0403 207 -DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHS------------AGALVIVAADPLALGL-LKPPGEFGADIVVGSAQ 271 (450)
T ss_pred -cccCeEEEEEecCC-CCCccchhHHHHHHHHhh------------cCCEEEEEechhHhhc-cCCccccCCceEEecCc
Confidence 24577889989875 567 77779999999998 78877764322 1222 23345679999999999
Q ss_pred c-----cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhh--ccCccccccCCCCChhH---HHHHHHH--
Q 010538 275 K-----IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKR--RQGVEELFEDGTASFLS---IASIRHG-- 342 (508)
Q Consensus 275 K-----~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~gt~~~~~---~~~l~~a-- 342 (508)
- .||||. +|++-+++++..++.-.+.|-. ........|... ...+.-|++-.|.|+-. +.++.++
T Consensus 272 rfGvPmgfGGPh-ag~fA~~~~~~R~mPGRlVG~S--~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y 348 (450)
T COG0403 272 RFGVPMGFGGPH-AGYFAVKDEFKRQMPGRLVGVS--VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMY 348 (450)
T ss_pred ccCCCcCCCCcc-eeeeeEhHhHhhcCCCceeeee--ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHH
Confidence 7 355553 8999999998655443443311 011111122211 12334566667777632 2333333
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHh
Q 010538 343 FNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLAS 422 (508)
Q Consensus 343 l~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~ 422 (508)
+-++...|+.+|..++.+++.++.++|++.. .|++++.+.- -..+.++++.. . ...+.+...
T Consensus 349 ~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~-----~g~~~~~~~f--------Fdt~~v~~~~~-~----~~~l~~~~~ 410 (450)
T COG0403 349 AVYHGPQGLKEIAERIHRLAAYLAAGLKEIG-----AGVELVFDHF--------FDTFTVRVPEE-V----AEALLAAAI 410 (450)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHhhcC-----CceEeccccc--------eeeEEEecchh-H----HHHHHHHHH
Confidence 4466677999999999999999999999663 2688876521 35556666531 0 123455555
Q ss_pred hCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 423 LSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 423 ~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
..|+-++.- ..+.+=+++.--+|.++|+.+++++...
T Consensus 411 ~~G~~L~~~---------------------------------------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 411 AGGINLRRV---------------------------------------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hcCCceeee---------------------------------------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 667776541 1457888888889999999999987643
No 316
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.50 E-value=1.2e-11 Score=129.93 Aligned_cols=350 Identities=12% Similarity=0.095 Sum_probs=199.8
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++..|+|..+. +--+|.+++++.+++. .. ........ ......++-++++++.... .+ .+.|+++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-~~-~~~~~~~~----~~~~~~~la~~l~~~~p~~~~~--~~~f~~s 109 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQ-QF-THTAYQIV----PYESYVTLAEKINALAPVSGQA--KTAFFTT 109 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHH-hc-cCcccCcc----CCHHHHHHHHHHHHhCCCCCCc--eEEEeCC
Confidence 78889997543 5558888888766543 21 11111101 1122334445566666432 24 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEeccc-ccchHHHHHHHH-----hcC-----CeEEEEccCCccCcccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMEN-HNSVLGIREYAL-----SQG-----AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~-h~s~~~~~~~~~-----~~G-----~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
+++|+..++.... ..+..+|+..... |........... +.+ ..+..+|......- + ..
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~--~--------~~ 179 (421)
T PRK09792 110 GAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHG--I--------ST 179 (421)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccc--c--------cH
Confidence 9999987766542 2334566666543 333333322210 001 01222332211000 0 00
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc-C---HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF-N---LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC- 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~-~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~- 254 (508)
..+.+.++ +.+++. ...++++.|++..+++++|... | +++|.++|++ +|+++|+|++++.
T Consensus 180 ~~~~~~l~--~~~~~~-~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~------------~g~llI~DEv~tg~ 244 (421)
T PRK09792 180 QDSLDAIE--RLFKSD-IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDE------------HGIVMIADEVQSGF 244 (421)
T ss_pred HHHHHHHH--HHHHhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEeccccCC
Confidence 01245565 444321 0135678999988899999876 6 4455555554 9999999999763
Q ss_pred CCCC--CCCCC--CCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 255 VTQP--PDLSK--YPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 255 g~~~--~d~~~--~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
|... ..... ...|+. ++.|.++ +. -+|++++++++.+.+.+...+ ...
T Consensus 245 gr~G~~~a~~~~~~~pDi~--t~gK~l~-~G~pigav~~~~~i~~~~~~~~~~------------------------~T~ 297 (421)
T PRK09792 245 ARTGKLFAMDHYADKPDLM--TMAKSLA-GGMPLSGVVGNANIMDAPAPGGLG------------------------GTY 297 (421)
T ss_pred CCCCchhHHHhcCCCCcEE--Eeehhhc-CCCceEEEEEcHHHHhccCCCCcC------------------------CCC
Confidence 2221 12222 246765 4569887 41 289999998887655432111 011
Q ss_pred CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC
Q 010538 330 TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG 409 (508)
Q Consensus 330 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 409 (508)
..|....++..++++++.+. ++.++.+++.+++.+.|+++.. ..|. +....+ .+.++++.+.+.+.
T Consensus 298 ~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~--~~p~--v~~vrG-------~Gl~~~ie~~~~~~ 363 (421)
T PRK09792 298 AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKE--SVPA--IAAVRG-------LGSMIAAEFNDPQT 363 (421)
T ss_pred CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHH--hCCC--cceecc-------cceEEEEEecCCcc
Confidence 23444555666678877653 5677888888888888876521 0011 111222 27888888864321
Q ss_pred Cc---cCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 410 SW---FGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 410 ~~---~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
.. .....+.+.+.++||.+... . ...+.||+.+.+-.|++
T Consensus 364 ~~~~~~~~~~l~~~~~~~Gv~i~~~----g---------------------------------~~~~~irl~P~l~i~~~ 406 (421)
T PRK09792 364 GEPSAAIAQKIQQRALAQGLLLLTC----G---------------------------------AYGNVIRFLYPLTIPDA 406 (421)
T ss_pred CCcchHHHHHHHHHHHHCCcEEeec----C---------------------------------CCCCEEEEeCCCcCCHH
Confidence 10 12345777788899998531 0 01578999999999999
Q ss_pred HHHHHHHhhhhhh
Q 010538 487 DAKVNRCSSFDFV 499 (508)
Q Consensus 487 ev~~l~~~~~~~~ 499 (508)
|++++++.+.+.+
T Consensus 407 ei~~~~~~l~~~l 419 (421)
T PRK09792 407 QFDAAMKILQDAL 419 (421)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988765
No 317
>PRK06541 hypothetical protein; Provisional
Probab=99.50 E-value=1.4e-11 Score=130.80 Aligned_cols=361 Identities=11% Similarity=0.036 Sum_probs=201.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.++...-.+..+. .+ ..+...++-+++++++..+.+ .+.|++++
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~-~~-----~~~~~~~la~~l~~~~p~~~~--~v~f~~sG 121 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLW-SY-----AHPPAIELAERLAALAPGDLN--RVFFTTGG 121 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcccc-cc-----CCHHHHHHHHHHHHhCCCCcC--EEEEcCCc
Confidence 7888999743 3555788988876654321111111 11 122334455667777654445 89999999
Q ss_pred HHHHHHHHhhcC-C---C---CCCeEEEeccc-ccchHHHHHHHH----hc--C---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-W---S---HQSSYMYTMEN-HNSVLGIREYAL----SQ--G---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-~---~---~g~~vl~~~~~-h~s~~~~~~~~~----~~--G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . . +..+||..... |........... +. + ..+..+|...........+ ..
T Consensus 122 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~ 199 (460)
T PRK06541 122 SEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGD--DP 199 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCC--CH
Confidence 999987765432 1 1 23566665443 333332222110 00 0 1122333221000000000 00
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
....+..++.++ +.+.+. ..+.+..|++..++++.|.+.| +++|.++|++ +|+++|+|++
T Consensus 200 ~~~~~~~~~~l~--~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~------------~g~llI~DEV 263 (460)
T PRK06541 200 EAFGRWAADRIE--EAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDR------------YDVLLVSDEV 263 (460)
T ss_pred HHHHHHHHHHHH--HHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEech
Confidence 000000124455 444211 1246788888888999999998 7777777776 9999999999
Q ss_pred c-cCCCCCCC--C--CCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccc
Q 010538 252 K-GCVTQPPD--L--SKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEEL 325 (508)
Q Consensus 252 ~-~~g~~~~d--~--~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (508)
| ++|....- . .....|++++ .|.+++-. -+|+++++++..+.+.+.. .. .
T Consensus 264 ~tGfGR~G~~~a~~~~gv~PDivt~--gK~l~~G~~pigav~~~~~i~~~~~~~~-~~---------------------~ 319 (460)
T PRK06541 264 ICAFGRLGEMFGCERFGYVPDIITC--AKGITSGYSPLGAMIASDRLFEPFLDGP-TM---------------------F 319 (460)
T ss_pred hhCCCcCchhhhhhhcCCCCCEEEe--cccccCCccceeEEEEcHHHHHHhhcCC-Cc---------------------c
Confidence 8 55532211 1 1224788865 59777210 2799999988876554320 00 0
Q ss_pred ccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 326 FEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 326 ~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
+..+| .|....++..++++.+.+ +.+.++..++.++|.+.|+++.. .+.+..+. + .+.++.+.
T Consensus 320 ~~~~T~~gnp~~~aaala~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~---~~~v~~vr--g-------~Gl~~~ie 384 (460)
T PRK06541 320 LHGYTFGGHPVSAAVALANLDIFER---EGLLDHVRDNEPAFRATLEKLLD---LPIVGDVR--G-------DGYFYGIE 384 (460)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhc---CCCeEEEE--e-------cceEEEEE
Confidence 01112 334455556667777654 35678899999999999987621 11111111 1 26677777
Q ss_pred eeCCCC--CccC--------HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCc
Q 010538 404 LKRPDG--SWFG--------YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTG 473 (508)
Q Consensus 404 ~~~~~~--~~~~--------~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (508)
+..... ..++ ...+.+.+.++||.+.+.. ....
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------------------------------~g~~ 427 (460)
T PRK06541 385 LVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-------------------------------------RGDP 427 (460)
T ss_pred EecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-------------------------------------CCCC
Confidence 642110 0010 0235667778999987521 0136
Q ss_pred eEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 474 AIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 474 ~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.+|+++....|++||+++++++.+.+.-
T Consensus 428 ~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 428 VVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999987753
No 318
>PRK06062 hypothetical protein; Provisional
Probab=99.50 E-value=4.4e-11 Score=126.66 Aligned_cols=360 Identities=12% Similarity=0.050 Sum_probs=203.1
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .+--+|.+++++.++...-...++ .+ ......++-++++++.....+ .+.|++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 121 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--AH-----ANDARSEAARLIAERAPGDLS--KVFFTNGG 121 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--cc-----CCHHHHHHHHHHHHhCCCCCC--EEEEcCCh
Confidence 7889999854 355588999888665432111111 11 123344556667777654445 89999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccc-cchHHHHHHHHh---cC-----CeEEEEccCCccCccccccccccccccccc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENH-NSVLGIREYALS---QG-----AAAFAIDVEEAVDNDGLSESLVTSTKISLL 182 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h-~s~~~~~~~~~~---~G-----~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d 182 (508)
++|+..++.... ..+..+||.....| ......+..... .. ..+..++........ +.. ..........
T Consensus 122 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~-~~~~~~~~~~ 199 (451)
T PRK06062 122 ADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSE-FHA-TTEEEECERA 199 (451)
T ss_pred HHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccc-cCC-CChHHHHHHH
Confidence 999988776542 23445666665433 333333222100 00 011122211100000 000 0000000001
Q ss_pred hhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCC
Q 010538 183 PIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQ 257 (508)
Q Consensus 183 ~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~ 257 (508)
++.++ +.++.. ..+++..|++..+....|.+.| ++++.++|++ +|+++|+|++|+ +|..
T Consensus 200 ~~~le--~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~------------~g~lLI~DEV~tGfGRt 263 (451)
T PRK06062 200 LAHLE--RVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR------------HGIVLIADEVMAGFGRT 263 (451)
T ss_pred HHHHH--HHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH------------cCCEEEeeccccCCCcC
Confidence 45555 444211 1256788999889888899999 7788888887 999999999987 3321
Q ss_pred C----CCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCC
Q 010538 258 P----PDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTAS 332 (508)
Q Consensus 258 ~----~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 332 (508)
- .+......|+++++ |.+++-. -+|.+++++++.+.+.+..+..+ . ..+-|
T Consensus 264 G~~~a~~~~gv~PDi~t~g--K~lggG~~Pigav~~~~~i~~~~~~~~~~~~---------------------~-T~~gn 319 (451)
T PRK06062 264 GKWFAIEHFGVVPDLITFA--KGVNSGYVPLGGVAISEAIAATFADRPYPGG---------------------L-TYSGH 319 (451)
T ss_pred cHHHHHHhcCCCCCeeeec--hhhhcCCcCcEEEEEcHHHHHHhccCCCCCC---------------------C-CCCCC
Confidence 1 11112247888765 9777310 17888999887665542110000 0 01224
Q ss_pred hhHHHHHHHHHHHHHhcChHHHHHHHHHHH-HHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC--
Q 010538 333 FLSIASIRHGFNLINSLTVPAICRHIASLG-MYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG-- 409 (508)
Q Consensus 333 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~-~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 409 (508)
..+.++..++++.+.+. .+.++..++. ++|.+.|+++.. ...++..-. -.+.++.+.+.....
T Consensus 320 pl~~Aaa~a~L~~l~~~---~l~~~~~~~G~~~l~~~L~~l~~-----~~~~v~~vr------G~Gl~~gve~~~~~~~~ 385 (451)
T PRK06062 320 PLACAAAVATINAMEEE---GIVENAARIGAEVLGPGLRELAE-----RHPSVGEVR------GLGVFWALELVADRETR 385 (451)
T ss_pred HHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHh-----cCCcEEeEe------ccccEEEEEEccccccc
Confidence 55666777788887664 4667777776 577777766421 111111111 125666666642111
Q ss_pred Ccc--------CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC
Q 010538 410 SWF--------GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY 481 (508)
Q Consensus 410 ~~~--------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 481 (508)
..+ ....+.+.+.++||.+.+. .+.+|+++.+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------------------------------------~~~lrl~ppl 425 (451)
T PRK06062 386 EPLAPYGASSAAMAAVKAACKERGLLPFVN----------------------------------------GNRIHVVPPC 425 (451)
T ss_pred CCCcccchhhHHHHHHHHHHHHCCcEEeec----------------------------------------CCEEEEECCc
Confidence 001 1235777888899997541 3579999999
Q ss_pred CCCHHHHHHHHHhhhhhhhhhh
Q 010538 482 MSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 482 ~~t~eev~~l~~~~~~~~~~~~ 503 (508)
.+|++||+++++.+.+.++-++
T Consensus 426 ~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 426 TVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred cCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998876543
No 319
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.49 E-value=3.2e-11 Score=127.37 Aligned_cols=358 Identities=12% Similarity=0.028 Sum_probs=202.6
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. +.-+|.+++++.+++ ......+.... ......++.+++++++....+ .+.|++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql-~~l~~~~~~~~-----~~~~~~~la~~l~~~~p~~~~--~v~f~~sG 115 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQA-GELDYAPAFQM-----GHPKAFELANRIAEIAPGGLN--HVFFTNSG 115 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHH-HhCCCcccCCc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 78889998543 666888988876554 32211111111 122334566667777643344 79999999
Q ss_pred HHHHHHHHhhcC-C-----C-CCCeEEEecccc-cchHHHHHHH------HhcC---CeEEEEccCCc-cC--ccccccc
Q 010538 113 TAALKLVGEAFP-W-----S-HQSSYMYTMENH-NSVLGIREYA------LSQG---AAAFAIDVEEA-VD--NDGLSES 172 (508)
Q Consensus 113 t~al~~~~~~l~-~-----~-~g~~vl~~~~~h-~s~~~~~~~~------~~~G---~~v~~v~~~~~-~~--~~~l~~~ 172 (508)
++|+..++.... . + ...+||+....| .......... +.++ ..+..+|.... .. +..-
T Consensus 116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--- 192 (442)
T PRK13360 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG--- 192 (442)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCC---
Confidence 999988766432 1 1 234666665433 3222222110 0011 12333433210 00 0000
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEE
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLI 248 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~viv 248 (508)
....-....+.++ +.+... ..+++..|++..+....|.+.| +++|.++|++ +|+++|+
T Consensus 193 --~~~~~~~~~~~le--~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~------------~g~llI~ 254 (442)
T PRK13360 193 --QPEHGAELADELE--RLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDK------------HGILLIF 254 (442)
T ss_pred --hHHHHHHHHHHHH--HHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEE
Confidence 0000000134555 444211 1256789999999999999999 8888888887 9999999
Q ss_pred eccc-cCCCCC--C--CCCCCCCcEEEEeccccccC---CCcceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 249 DAAK-GCVTQP--P--DLSKYPVDFVVMSFYKIFGY---PTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 249 D~a~-~~g~~~--~--d~~~~~~D~~~~S~~K~~g~---P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
|++| ++|..- . +......|++++| |.+++ | +|.+.++++..+.+...-..+. .+
T Consensus 255 DEv~tG~GrtG~~~a~~~~gv~PDivt~g--K~l~gG~~P--~gav~~~~~i~~~~~~~~~~~~---------~~----- 316 (442)
T PRK13360 255 DEVITGFGRLGAPFAAQYFGVTPDLLTCA--KGLTNGAIP--MGAVFVSSEIHDAFMQGPEAGI---------EF----- 316 (442)
T ss_pred echhhCCCCCccchhhhhcCCCCceeeee--eccccCccc--eEEEEEcHHHHHHhhcCCcccc---------cc-----
Confidence 9998 454321 1 1122246887665 97762 3 7888888887654432100000 00
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceE
Q 010538 321 GVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMV 400 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (508)
...+ ..+.|....++..++++.+.+. .+.++..++.+++++.|+++.. .+.+ .+-.. ++.+.
T Consensus 317 --~~~~-T~~g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~---~~~v---~~vrG------~Gl~~ 378 (442)
T PRK13360 317 --FHGY-TYSGHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRD---APHV---IDIRN------LGLVG 378 (442)
T ss_pred --ccCC-CCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhc---CCCe---eeeec------cceEE
Confidence 0000 1123566677777888888764 4667888889999998876520 0111 11110 13344
Q ss_pred EEEeeCCC-CCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 401 SFNLKRPD-GSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 401 ~~~~~~~~-~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
.+.+.... +..-....+.+.+.++||.+..+ .+.+|+++
T Consensus 379 ~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------------------------------------~~~lr~~P 418 (442)
T PRK13360 379 AVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----------------------------------------GDILALSP 418 (442)
T ss_pred EEEEecCCCCcchhHHHHHHHHHHCCcEEEec----------------------------------------CCEEEEeC
Confidence 44443211 11011234667778899998642 35799999
Q ss_pred CCCCCHHHHHHHHHhhhhhhhh
Q 010538 480 GYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.+.+|.+|||++++.+.+.++-
T Consensus 419 pl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 419 PLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred CCccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887753
No 320
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.49 E-value=2.7e-11 Score=126.77 Aligned_cols=338 Identities=13% Similarity=0.083 Sum_probs=192.8
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.++.. .... ....+ ......++-+++.++.... + .+.|++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~~~-~~~~~-----~~~~~~~la~~L~~~~~~~-~--~v~f~~sG 107 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAG-KLWH-TSNVF-----YSAPPLKLAEELVTASRFA-E--KVFLCNSG 107 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHH-hccc-ccccc-----CCHHHHHHHHHHHhhCCCC-C--EEEEcCch
Confidence 7888999743 35558889888766543 2211 11111 1122334455566655322 4 79999999
Q ss_pred HHHHHHHHhhcC-C---C----CCCeEEEeccc-ccchHHHHHHHHhcCCeEEE---EccCCccCccccccccccccccc
Q 010538 113 TAALKLVGEAFP-W---S----HQSSYMYTMEN-HNSVLGIREYALSQGAAAFA---IDVEEAVDNDGLSESLVTSTKIS 180 (508)
Q Consensus 113 t~al~~~~~~l~-~---~----~g~~vl~~~~~-h~s~~~~~~~~~~~G~~v~~---v~~~~~~~~~~l~~~~~~~~~~~ 180 (508)
++|+..++.... . + ...+|+..... |......... .|..... -|....... .. -
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~---~~~~~~~~~~~~~~~~~~~--------~~---~ 173 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTA---TAQPKYQEGYEPLPGGFRY--------VD---F 173 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHh---cCCcccccCCCCCCCCceE--------cC---C
Confidence 999988775432 1 1 12356665543 3333332221 1111000 011000000 00 1
Q ss_pred cchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC-----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-C
Q 010538 181 LLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN-----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-C 254 (508)
Q Consensus 181 ~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~-----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~ 254 (508)
+|++.++ ++++ .+++.+|++... +.+|.+++ +++|.++|++ +|+++|+|++|+ +
T Consensus 174 ~d~~~l~--~~~~-----~~~~aavi~eP~-~~~gg~~~~~~~~l~~l~~l~~~------------~g~llI~DEv~tg~ 233 (408)
T PRK04612 174 NDVEALE--AAMA-----GGDVAAVMLEPI-QGEGGVMPAAPGFLARVRALCDQ------------HDALLVLDEIQCGM 233 (408)
T ss_pred CCHHHHH--HhhC-----CCCEEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEeccccCC
Confidence 2567777 5553 234566666554 44555544 4455666665 999999999986 3
Q ss_pred CCCC--CCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC
Q 010538 255 VTQP--PDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT 330 (508)
Q Consensus 255 g~~~--~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 330 (508)
|... ......++...+.++.|.++ + | +|+++++++..+.+.....+ .. .+
T Consensus 234 gr~G~~~a~~~~~~~pdi~t~~K~l~-~-G~piga~~~~~~~~~~~~~~~~~-----------------------~t-~~ 287 (408)
T PRK04612 234 GRTGTLFAHWQEQVTPDIVTLAKALG-G-GFPIGAMLAGPKVAETMQFGAHG-----------------------TT-FG 287 (408)
T ss_pred CcCCchhhhhhcCCCCCEEEEcchhc-C-CCceEEEEECHHHHhhhcCCCcC-----------------------CC-CC
Confidence 3321 11111234444455669887 4 3 79999888876555432110 01 12
Q ss_pred CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC
Q 010538 331 ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS 410 (508)
Q Consensus 331 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 410 (508)
.+....++..++++.+.+ +++.+++.++.++|.+.|+++.. ...++..... ++.++.+.+......
T Consensus 288 ~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~-----~~~~i~~vrg------~Gl~~~i~~~~~~~~ 353 (408)
T PRK04612 288 GNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNA-----EFGVFAQVRG------RGLMLGAVLAPAHAG 353 (408)
T ss_pred CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----hCCCeeeeec------cceEEEEEecCchhh
Confidence 345566666778887765 46778889999999999887621 1222222211 266777776421111
Q ss_pred ccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHH
Q 010538 411 WFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKV 490 (508)
Q Consensus 411 ~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~ 490 (508)
....+.+.+.++|+.+.+. ..+.+|+++++..|++||+.
T Consensus 354 --~a~~i~~~l~~~Gvlv~~~---------------------------------------g~~~lRl~Ppl~it~eeid~ 392 (408)
T PRK04612 354 --QAGAILDLAAEHGLLLLQA---------------------------------------GPDVLRFVPALNLTDAELAD 392 (408)
T ss_pred --HHHHHHHHHHHCCeEEeeC---------------------------------------CCCEEEEcCCccCCHHHHHH
Confidence 1235778888999998541 14689999999999999999
Q ss_pred HHHhhhhhhhh
Q 010538 491 NRCSSFDFVNF 501 (508)
Q Consensus 491 l~~~~~~~~~~ 501 (508)
+++.+.+.++.
T Consensus 393 ~l~~l~~~l~~ 403 (408)
T PRK04612 393 GLARLRLALAD 403 (408)
T ss_pred HHHHHHHHHHH
Confidence 99999887643
No 321
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.49 E-value=2.6e-11 Score=129.79 Aligned_cols=360 Identities=14% Similarity=0.079 Sum_probs=202.9
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-CCCCCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN-ASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-~~~~~~~i~~t~g 111 (508)
++.-|+|..+ .|--+|.+++++.+++. ... ..... .+ .......++.+++.+++. .+.+ .+.|+++
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~-~~~-~~~~~--~~-~~~~~~~~lae~L~~~~~~~~~~--~v~f~~S 159 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLN-KLP-FYHSF--WN-RTTKPSLDLAKELLEMFTARKMG--KVFFTNS 159 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHh-hcc-ceecc--cc-cCcHHHHHHHHHHHhhcCCCCCC--EEEEeCC
Confidence 6788999543 45558888888766542 211 00110 00 012334455566666643 3445 7999999
Q ss_pred hHHHHHHHHhhcC------C-CCCCeEEEec-ccccchHHHHHHHH------hcCC---eEEEEccCCccC--ccccccc
Q 010538 112 ATAALKLVGEAFP------W-SHQSSYMYTM-ENHNSVLGIREYAL------SQGA---AAFAIDVEEAVD--NDGLSES 172 (508)
Q Consensus 112 ~t~al~~~~~~l~------~-~~g~~vl~~~-~~h~s~~~~~~~~~------~~G~---~v~~v~~~~~~~--~~~l~~~ 172 (508)
+++|+..++.... - .....||... .-|.+....+.... .++. .+..++...... +..-
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--- 236 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGE--- 236 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCC---
Confidence 9999998877552 1 1234555554 45555443332210 0110 012222110000 0000
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEE
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLI 248 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~viv 248 (508)
..........++++ +.+.+ ...+++..|++..+....|.+.| ++++.++|++ +|+++|+
T Consensus 237 -~~~~~~~~~~~~le--~~l~~--~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~------------~g~lLI~ 299 (504)
T PLN02760 237 -TEEEFSTRLADNLE--NLILK--EGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKK------------YDILFIA 299 (504)
T ss_pred -cHHHHHHHHHHHHH--HHHHh--cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEe
Confidence 00000000123344 33321 11246788899888888899999 8888888887 9999999
Q ss_pred eccc-cCCCCCC----CCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 249 DAAK-GCVTQPP----DLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 249 D~a~-~~g~~~~----d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
|+++ ++|..-. +......|+++++ |.+|+- ..+|.+++++++.+.+.+.....+
T Consensus 300 DEV~TGfGRtG~~~a~e~~gv~PDivtlg--K~lggG~~PigAv~~~~~i~d~~~~~~~~~~------------------ 359 (504)
T PLN02760 300 DEVICAFGRLGTMFGCDKYNIKPDLVSLA--KALSSAYMPIGAVLVSPEISDVIHSQSNKLG------------------ 359 (504)
T ss_pred cchhhCCcccchhhHHHhcCCCCcEEEec--ccccCCccccceEeecHHHHhhhhccccccc------------------
Confidence 9999 4543221 1112247887776 977631 016888899888765543200000
Q ss_pred cccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceE
Q 010538 323 EELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMV 400 (508)
Q Consensus 323 ~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (508)
.....+| -|..++++..++++.+.+ +++.++.+++.++|++.|+++. ...++..-. -.+.++
T Consensus 360 -~~~h~~T~~gnPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~------~~~~v~~vr------G~Gl~~ 423 (504)
T PLN02760 360 -SFAHGFTYSGHPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAFS------GSPIIGEIR------GTGLIL 423 (504)
T ss_pred -CcccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHh------cCCCeeeEE------eCceEE
Confidence 0001112 245566677778888766 3568889999999999987752 111121111 126677
Q ss_pred EEEeeCCCCC-c-cC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCc
Q 010538 401 SFNLKRPDGS-W-FG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTG 473 (508)
Q Consensus 401 ~~~~~~~~~~-~-~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (508)
.+.+.+.... + +. ...+.+.+.++||.+.+. ..
T Consensus 424 gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------------------g~ 463 (504)
T PLN02760 424 GTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------------------------------------GD 463 (504)
T ss_pred EEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------------------------------------CC
Confidence 7776432210 0 10 234667778899998652 24
Q ss_pred eEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 474 AIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 474 ~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.+|+++.+-.|++||+++++++.+.++.
T Consensus 464 ~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 464 NIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999998877644
No 322
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.48 E-value=6.6e-11 Score=124.75 Aligned_cols=351 Identities=11% Similarity=0.042 Sum_probs=191.2
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCC-CCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASM-KDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~~i~~t~g 111 (508)
++..|+|..+. +--+|.+.+++.++.. .. ....... .. . ....++-+.+++..+.+. + .++|+++
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~-~~-~~~~~~~-~~--~-~~~~~la~~l~~~~~~~~~~--~~~f~~s 110 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLK-KL-SHTCFQV-LA--Y-EPYLELCEKMNQKVPGDFAK--KTLLVTT 110 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHh-hC-CCccccc-cC--C-HHHHHHHHHHHHhCCCCCCC--EEEEeCC
Confidence 77888998543 4448888887765442 21 1111110 00 1 112244555666665433 3 6888888
Q ss_pred hHHHHHHHHhhcC--CCCCCeEEEecccccchHHHHHHHHh-----cCC-----eEEE--EccCCccCcccccccccccc
Q 010538 112 ATAALKLVGEAFP--WSHQSSYMYTMENHNSVLGIREYALS-----QGA-----AAFA--IDVEEAVDNDGLSESLVTST 177 (508)
Q Consensus 112 ~t~al~~~~~~l~--~~~g~~vl~~~~~h~s~~~~~~~~~~-----~G~-----~v~~--v~~~~~~~~~~l~~~~~~~~ 177 (508)
+++|+..++.... ..++..|.....-|.........-.. .|. .+.. +|.+..+ .
T Consensus 111 Gsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~----------- 178 (425)
T PRK08088 111 GSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-V----------- 178 (425)
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-c-----------
Confidence 8887765544331 22334444444444444333222100 000 0011 1111110 0
Q ss_pred ccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc
Q 010538 178 KISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG 253 (508)
Q Consensus 178 ~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~ 253 (508)
....+++.++ +.+++. ...++.+.|++..+....|.+.+ .++|.++|++ +|+++|+|++++
T Consensus 179 ~~~~~~~~l~--~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~------------~~~~lI~Dev~~ 243 (425)
T PRK08088 179 SEDDAIASIE--RIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDE------------HGIMLIADEVQT 243 (425)
T ss_pred cHHHHHHHHH--HHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEecccc
Confidence 0001244566 544310 11346778888777777777766 5666666665 999999999987
Q ss_pred C-CCCC--CCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 254 C-VTQP--PDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 254 ~-g~~~--~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
. |... ..+...+++.-+.|++|.++ | | +|++++++++++.+.....+ ..
T Consensus 244 g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~-G~rig~v~~~~~~~~~~~~~~~~------------------------~t 297 (425)
T PRK08088 244 GAGRTGTLFAMEQMGVAADLTTFAKSIA-G-GFPLAGVTGRAEVMDAIAPGGLG------------------------GT 297 (425)
T ss_pred CCCcCcchhHHhhcCCCCCEEEEecccc-C-CCcceeeEecHHHHhhcCCCCCC------------------------CC
Confidence 3 2221 11112233333577789888 6 4 89999999887766532110 11
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD 408 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 408 (508)
.+.+....++..+.++.... +.+.++.+++.+++.+.|.++.. ..+.+.-+ .+ .+.++++.+.+..
T Consensus 298 ~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~--~~~~~~~v--~g-------~G~~~~l~l~~~~ 363 (425)
T PRK08088 298 YAGNPIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAE--KHPEIGDV--RG-------LGAMIAIELFEDG 363 (425)
T ss_pred CCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEE--ec-------cceEEEEEEecCC
Confidence 12344445555556665433 45666666777777776665421 00222111 11 1778888884321
Q ss_pred C----CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 409 G----SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 409 ~----~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
. .......+.+.+.++||.+.++.. ..+.+|+++....|
T Consensus 364 ~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~-------------------------------------~~~~iRl~~~~~~t 406 (425)
T PRK08088 364 DHSKPNAKLTAQIVARARDKGLILLSCGP-------------------------------------YYNVLRILVPLTIE 406 (425)
T ss_pred CCCCCCHHHHHHHHHHHHhCCCEEecCCC-------------------------------------CCCEEEEECCCCcC
Confidence 1 111234577888889998765211 14679999999999
Q ss_pred HHHHHHHHHhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~ 501 (508)
.+|++..++.+.+.++.
T Consensus 407 ~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 407 DAQIRQGLEIIAQCFDE 423 (425)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987753
No 323
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.47 E-value=9.9e-11 Score=123.21 Aligned_cols=356 Identities=12% Similarity=0.036 Sum_probs=198.7
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC-CCCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA-SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~~~~~~i~~t~g 111 (508)
++.-|+|..+. +--+|.+++++.+++. .. ........ ......++-+++++++.. ..+ .+.|+++
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~-~~-~~~~~~~~----~~~~~~~la~~l~~~~p~~~~~--~v~f~~s 102 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVA-EF-THTCFMVT----PYEGYVALAEKLNRIAPGSGPK--KSVFFNS 102 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHH-hc-cCcccccc----CChHHHHHHHHHHHhCCCCCCC--EEEEeCC
Confidence 67889997433 5558889888766543 21 11111101 112233445556666642 234 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEecccc-cchHHHHHHHH-----hcC-----CeEEEEccCCccCcccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMENH-NSVLGIREYAL-----SQG-----AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~h-~s~~~~~~~~~-----~~G-----~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
+++|+..++.... ..+...|+.....| ........... ..+ ..+..+|........ .. ......
T Consensus 103 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~ 178 (420)
T TIGR00700 103 GAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDG-LL---DKQLST 178 (420)
T ss_pred cHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccc-cc---ccchhH
Confidence 9999988766432 23445566555433 33333332110 011 112223321100000 00 000000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC- 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~- 254 (508)
..+++.++ +.+.. ....+++..|++..+...+|.+.| +++|.++|++ ||+++|+|+++..
T Consensus 179 ~~~~~~~~--~~~~~-~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~------------~gillI~DEV~tg~ 243 (420)
T TIGR00700 179 DGELAAAR--AIFVI-DVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE------------HGIVFIADEVQTGF 243 (420)
T ss_pred HHHHHHHH--HHHHh-hcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEEecccCC
Confidence 11234455 33310 112367899999989999999888 5666666766 9999999999863
Q ss_pred CCCC--CCCC--CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 255 VTQP--PDLS--KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 255 g~~~--~d~~--~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
|... ..+. ....|+++ ++|.++ + | +|++++++++.+.+.+...+. .
T Consensus 244 gr~g~~~a~~~~~~~pDi~~--lsK~l~-~-G~pig~v~~~~~i~~~~~~~~~~~------------------------T 295 (420)
T TIGR00700 244 ARTGAMFACEHEGPEPDLIT--TAKSLA-D-GLPLSGVTGRAEIMDAPAPGGLGG------------------------T 295 (420)
T ss_pred cccchhHHHhhcCCCCCEEE--eecccc-C-CcceEEEEecHHHHhhcCCCCcCC------------------------C
Confidence 2211 1111 22467665 569887 4 4 899999998876654321111 1
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD 408 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 408 (508)
.+.|....++..++++++.+. .+.++..++.+++++.|+++.. ..+.+.-+.. .+.++++.+.+.+
T Consensus 296 ~~~~pl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~--~~~~~~~vrg---------~G~~~~i~~~~~~ 361 (420)
T TIGR00700 296 YAGNPLACAAALAVLAIIESE---GLIERARQIGRLVTDRLTTLKA--VDPRIGDVRG---------LGAMIAVELVDPG 361 (420)
T ss_pred CCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHh--hCCCEEEeec---------cceEEEEEEecCC
Confidence 123445566666678877654 4556677777777777765421 0022222211 2677777764321
Q ss_pred CCc---cCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 409 GSW---FGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 409 ~~~---~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
... -....+.+.+.++||.+.++..+ .+.+|+++..-.|.
T Consensus 362 ~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-------------------------------------~~~lRl~p~l~~~~ 404 (420)
T TIGR00700 362 TTEPDAGLAERIATAAHAAGLLLLTCGMF-------------------------------------GNIIRFLPPLTIGD 404 (420)
T ss_pred CCCccHHHHHHHHHHHHHCCeEEeccCCC-------------------------------------CCEEEEECCCCcCH
Confidence 100 01234556667899999875311 36899999887899
Q ss_pred HHHHHHHHhhhhhhh
Q 010538 486 EDAKVNRCSSFDFVN 500 (508)
Q Consensus 486 eev~~l~~~~~~~~~ 500 (508)
+++++.++.+.++++
T Consensus 405 ~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 405 ELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999887763
No 324
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=7.9e-11 Score=123.87 Aligned_cols=355 Identities=13% Similarity=0.064 Sum_probs=199.0
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++.-|+|..+. +--+|.+++++.+++. ... ....... ......++-+++++++... .+ .+.|+++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-~l~-~~~~~~~----~~~~~~~la~~l~~~~p~~~~~--~v~f~~S 109 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLD-RFT-HTCHQVV----PYENYVRLAERLNALVPGDFAK--KTIFVTT 109 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHh-hcc-CcccCcc----CCHHHHHHHHHHHHhCCCCCCC--EEEECCc
Confidence 78889997443 5568888888766442 211 1111001 1223344556666766533 24 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEeccc-ccchHHHHHHHH-----hcC-----CeEEEEccCCccC-ccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMEN-HNSVLGIREYAL-----SQG-----AAAFAIDVEEAVD-NDGLSESLVTSTK 178 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~-h~s~~~~~~~~~-----~~G-----~~v~~v~~~~~~~-~~~l~~~~~~~~~ 178 (508)
+++|+..++.... ..+...|+..... |........... +.+ ..+..+|...... .+
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----------- 178 (425)
T PRK07495 110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVS----------- 178 (425)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccccccc-----------
Confidence 9999988776432 2344566665543 333322222100 001 1233344322100 00
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc-CHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCC
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF-NLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVT 256 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~-~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~ 256 (508)
.....+.++ +.+.+ ....++++.|++..+...+|.+. |.+.+.++.+ +|+++|+++|+|+++. +|.
T Consensus 179 ~~~~~~~l~--~~~~~-~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~---------l~~~~g~llI~DEv~tG~gr 246 (425)
T PRK07495 179 VEQSLAALD--KLFKA-DVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRE---------LCDQHGILLIADEVQTGFAR 246 (425)
T ss_pred HHHHHHHHH--HHHHh-ccCCCceEEEEECCccCCCCCccCCHHHHHHHHH---------HHHHcCCEEEEechhhcCCc
Confidence 001233444 33321 01134678888877777788554 4443333333 4445999999999986 322
Q ss_pred CC--CCCCCC--CCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 257 QP--PDLSKY--PVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 257 ~~--~d~~~~--~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
.. .-.... ..|+++ +.|.++ ++ -+|++++++++.+.+.+...+ .....
T Consensus 247 ~G~~~a~~~~gv~pDi~t--lsK~l~-~G~pigav~~~~~i~~~~~~~~~~------------------------~T~~~ 299 (425)
T PRK07495 247 TGKLFAMEHHEVAADLTT--MAKGLA-GGFPLAAVTGRAEIMDAPGPGGLG------------------------GTYGG 299 (425)
T ss_pred CCCceeecccCCCCCEEe--ehhhhc-CCccceEEEEcHHHHhccCCCCcC------------------------CCCCC
Confidence 21 111222 356554 459777 31 179999998887655432110 01123
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW 411 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 411 (508)
|....++..++++++.+ ..+.++.+++.++|.+.|+++.. .+..+..-. -.+.++++.+.+.+...
T Consensus 300 ~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vr------G~Gl~~~iel~~~~~~~ 365 (425)
T PRK07495 300 NPLGIAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRE-----TVPEIADIR------GPGFMNAVEFNDADSGL 365 (425)
T ss_pred CHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHh-----hCCCeeeee------cCceEEEEEEecCCCCC
Confidence 45556666678888865 35778888888888888876521 111111111 12678888875432111
Q ss_pred cC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHH
Q 010538 412 FG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDA 488 (508)
Q Consensus 412 ~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev 488 (508)
.+ ...+.+.+.++|+.+... .. ..+.+|+.+.+-.|++|+
T Consensus 366 ~~~~~~~~~~~~~~~~Gvl~~~~---g~----------------------------------~~~~~r~~Ppl~it~~~i 408 (425)
T PRK07495 366 PSAEFANRVRLKALEKGLILLTC---GV----------------------------------HGNVIRFLAPITIQDDVF 408 (425)
T ss_pred ccHHHHHHHHHHHHHCCeEEeec---CC----------------------------------CCCEEEEeCCCccCHHHH
Confidence 11 234677777899998541 00 147899999999999999
Q ss_pred HHHHHhhhhhhhhh
Q 010538 489 KVNRCSSFDFVNFS 502 (508)
Q Consensus 489 ~~l~~~~~~~~~~~ 502 (508)
+++++.+.+.++-+
T Consensus 409 d~~~~~l~~~l~~~ 422 (425)
T PRK07495 409 AEALDILEASILEA 422 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999877543
No 325
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.46 E-value=6.1e-11 Score=125.40 Aligned_cols=360 Identities=11% Similarity=0.009 Sum_probs=201.8
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. |--+|.+++++.+++ ......+...+ ......++.+++++++....+ .|.|++++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql-~~l~~~~~~~~-----~~~~~~~la~~L~~~~p~~~~--~v~f~~sG 118 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQA-ATLDYAPAFQM-----GHPLAFELAERLAELAPGGLD--HVFFTNSG 118 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHH-HhccCcccccc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 67889997443 556888888876544 32111111111 122334456667777654345 79999999
Q ss_pred HHHHHHHHhhcC-C-----C-CCCeEEEecccc-cchHHHHHH------HHhcC---CeEEEEccCC-cc--Cccccccc
Q 010538 113 TAALKLVGEAFP-W-----S-HQSSYMYTMENH-NSVLGIREY------ALSQG---AAAFAIDVEE-AV--DNDGLSES 172 (508)
Q Consensus 113 t~al~~~~~~l~-~-----~-~g~~vl~~~~~h-~s~~~~~~~------~~~~G---~~v~~v~~~~-~~--~~~~l~~~ 172 (508)
++|+..++.... + + ...+||.....| ......... ...++ ..+..+|... .. ....
T Consensus 119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 194 (445)
T PRK09221 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSK---- 194 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCC----
Confidence 999988766432 1 1 234566655433 222222111 00001 1122333211 00 0000
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEE
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLI 248 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~viv 248 (508)
.....-....+.++ +.+++. ..+++..|++..+....|.+.| ++++.++|++ +|+++|+
T Consensus 195 -~~~~~~~~~~~~l~--~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~------------~g~llI~ 257 (445)
T PRK09221 195 -GQPEHGAELADDLE--RLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDK------------HGILLIF 257 (445)
T ss_pred -ChHHHHHHHHHHHH--HHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHH------------cCCEEEE
Confidence 00000000123444 333211 1256889999999999999999 8888888887 9999999
Q ss_pred ecccc-CCCC--CCCCC--CCCCcEEEEeccccccC--CCcceEEEEechhHhhhccccccCceEEecccchhhhhhccC
Q 010538 249 DAAKG-CVTQ--PPDLS--KYPVDFVVMSFYKIFGY--PTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQG 321 (508)
Q Consensus 249 D~a~~-~g~~--~~d~~--~~~~D~~~~S~~K~~g~--P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (508)
|++|+ +|.. ..-.. ....|++++| |.+++ .+ +|.++++++..+.+...-..... +
T Consensus 258 DEV~tG~GRtG~~~~~~~~gv~PDi~~~g--K~l~gG~~P-i~av~~~~~i~~~~~~~~~~~~~---------~------ 319 (445)
T PRK09221 258 DEVITGFGRLGAAFAAERFGVTPDIITFA--KGLTNGAIP-MGAVIASDEIYDAFMQGPEYAIE---------F------ 319 (445)
T ss_pred eehhhCCCcCchhhHHHhcCCCCCEEEec--cccccCccc-ceeeEEcHHHHHhhccCcccccc---------c------
Confidence 99984 4421 11112 2235887766 86652 21 68888888876655321000000 0
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 322 VEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 322 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
..... .+.|...+++..++++.+.+. .+.++..++.++|++.|+++. ....+.+-.. .+.+..
T Consensus 320 -~~~~T-~~~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~------~~~~v~~vrg------~Gl~~~ 382 (445)
T PRK09221 320 -FHGYT-YSAHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLK------GLPHVIDIRN------IGLVAG 382 (445)
T ss_pred -ccccC-CCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhc------cCCCEEEEec------CceEEE
Confidence 00011 113445566666788887653 467899999999999998762 1111111111 145555
Q ss_pred EEeeCCCC-CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC
Q 010538 402 FNLKRPDG-SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG 480 (508)
Q Consensus 402 ~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 480 (508)
+.+..... .......+.+.+.++||.++.+ .+.+|+++.
T Consensus 383 v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----------------------------------------~~~lr~~Pp 422 (445)
T PRK09221 383 IELAPRPGAPGARGYEAFMKCFEKGLLVRYT----------------------------------------GDTIALSPP 422 (445)
T ss_pred EEEecccccccchHHHHHHHHHHCCeEEeec----------------------------------------CCEEEEECC
Confidence 55543211 1011234778888899998642 357999999
Q ss_pred CCCCHHHHHHHHHhhhhhhhhh
Q 010538 481 YMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 481 ~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+.+|++||+++++.+.+.++-+
T Consensus 423 l~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 423 LIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ccCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999887543
No 326
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=8.8e-11 Score=124.24 Aligned_cols=358 Identities=11% Similarity=0.069 Sum_probs=202.3
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++.-|+|..+ .+--+|.+++++.++.. ... ....... ..+...++.+++++++... .+ .|.|+++
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~-~~~-~~~~~~~----~~~~~~~lae~L~~~~p~~~~~--~v~f~~S 111 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQAD-KFI-HYTPAYM----YHEPLVRLAKKLCELAPGDFEK--RVTFGLS 111 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHH-hcc-Ccccccc----CCHHHHHHHHHHHHhCCCCCCC--EEEECCc
Confidence 7888999733 34457888888766542 211 1111100 1233455666777776543 24 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEecc-cccchHHHHHHHH-----h--cC---CeEEEEccCCccC--cccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTME-NHNSVLGIREYAL-----S--QG---AAAFAIDVEEAVD--NDGLSESLVTST 177 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~-~h~s~~~~~~~~~-----~--~G---~~v~~v~~~~~~~--~~~l~~~~~~~~ 177 (508)
+++|+..++.... ..+...||.... -|......+.... + .+ ..+..+|...... .... ..+
T Consensus 112 GseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~ 186 (445)
T PRK08593 112 GSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP-----DAN 186 (445)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC-----cHH
Confidence 9999998776432 233455665543 4444433332211 0 01 1133344321100 0000 000
Q ss_pred ccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc
Q 010538 178 KISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG 253 (508)
Q Consensus 178 ~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~ 253 (508)
.....++.++ +.+++. ...+++..|++..+....|.+.| ++++.++|++ +|+++|+|+++.
T Consensus 187 ~~~~~~~~~~--~~~~~~-~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~------------~g~llI~DEv~t 251 (445)
T PRK08593 187 FVEEYLAPLK--EMFEKY-LPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCRE------------HGILFAVDDIQQ 251 (445)
T ss_pred HHHHHHHHHH--HHHHhh-cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEechhh
Confidence 0000123333 222110 01356899999999998899877 6677777776 999999999984
Q ss_pred -CCCCCC----CCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 254 -CVTQPP----DLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 254 -~g~~~~----d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
+|..-. +......|++++ .|.+++-..+|+++.++++.+.+.+... .+ .
T Consensus 252 g~GrtG~~~a~~~~gv~pDi~t~--gK~l~~G~p~gav~~~~~i~~~~~~~~~-----------------------~~-T 305 (445)
T PRK08593 252 GLGRTGKWSSISHFNITPDLMSF--GKSLAGGMPMSAIVGRKEIMESLEAPAH-----------------------LF-T 305 (445)
T ss_pred CCCcCchHHHHHhcCCCCCEeee--cccccCCcccEEEEEcHHHHhhhccCCC-----------------------CC-C
Confidence 432211 111224687765 5976621117999999888765542100 01 1
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD 408 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 408 (508)
...|....++..++++.+.+ +++.++..++.++|++.|+++.. ...+++.-.. .+.++.+.+....
T Consensus 306 ~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~v~~vrG------~Gl~~gi~l~~~~ 371 (445)
T PRK08593 306 TGANPVSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVS-----KYNFVGDVRG------YGLSIGIDIVSDK 371 (445)
T ss_pred CCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEEec------cceEEEEEEecCC
Confidence 12344556666778887765 35678888888888888876521 1111221111 2555566654211
Q ss_pred C----CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 409 G----SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 409 ~----~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
. ..-....+.+.+.++||.+.+. ..+.+|+++.+.+|
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------------------------------------~~~~lr~~p~l~~t 412 (445)
T PRK08593 372 KLKTRDNEAALKICNYCFEHGVVIIAV---------------------------------------AGNVLRFQPPLVIT 412 (445)
T ss_pred CcCCCcHHHHHHHHHHHHHCCeEEecc---------------------------------------CCCEEEEECCCccC
Confidence 0 0001234777788899987541 13689999999999
Q ss_pred HHHHHHHHHhhhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~~~ 503 (508)
++||+++++++.+.++.++
T Consensus 413 ~~~id~~~~~l~~~l~~~~ 431 (445)
T PRK08593 413 YEQLDTALNTIEQAFTALE 431 (445)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998876543
No 327
>PRK12403 putative aminotransferase; Provisional
Probab=99.46 E-value=9.7e-11 Score=124.40 Aligned_cols=359 Identities=14% Similarity=0.104 Sum_probs=200.5
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+.-+|.+++++.++. .... . .+... + .......++.++++++++...+ .+.|++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~-~~~~-~-~~~~~-~-~~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 124 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQM-EQLP-Y-YNMFF-H-TTHPAVIELSELLFSLLPGHYS--HAIYTNSG 124 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHH-HhCC-C-eeccc-c-cCCHHHHHHHHHHHHhCCCCcC--EEEEeCCc
Confidence 7788999432 3445788888876654 2211 0 11110 0 1133455667778888865445 79999999
Q ss_pred HHHHHHHHhhcC------CCCCCeEEEeccc--ccchHHHHHHHHhc-----C---CeEEEEccCCccCc-ccccccccc
Q 010538 113 TAALKLVGEAFP------WSHQSSYMYTMEN--HNSVLGIREYALSQ-----G---AAAFAIDVEEAVDN-DGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~------~~~g~~vl~~~~~--h~s~~~~~~~~~~~-----G---~~v~~v~~~~~~~~-~~l~~~~~~ 175 (508)
++|+..++.... -+++..++++... |.+........... + ..+..+|....... .++ ..
T Consensus 125 seA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~ 200 (460)
T PRK12403 125 SEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGEL----TP 200 (460)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCC----Ch
Confidence 999998877652 1223445444333 66655443321100 0 01222321100000 000 00
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
...-....+.++ +.+.+ ...+++..|++..+....|.+.| ++.+.++|++ +|+++|+|++
T Consensus 201 ~~~~~~~~~~le--~~~~~--~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~------------~g~lLI~DEV 264 (460)
T PRK12403 201 AEFGRRAALQLE--EKILE--LGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQ------------YDVLLCADEV 264 (460)
T ss_pred HHHHHHHHHHHH--HHHHH--hCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEecc
Confidence 000000123333 22211 11246788889889888899988 7788888887 9999999999
Q ss_pred cc-CCCCCC----CCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccc
Q 010538 252 KG-CVTQPP----DLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEEL 325 (508)
Q Consensus 252 ~~-~g~~~~----d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (508)
|+ +|..-. +.-....|++++ .|.+++-. -+|.++++++..+.+.+. +. ..
T Consensus 265 ~tGfGRtG~~~a~e~~gv~PDiv~~--gK~lggG~~Piga~v~~~~i~~~~~~~--~~--------------------~~ 320 (460)
T PRK12403 265 IGGFGRTGEWFAHEHFGFEPDTLSI--AKGLTSGYVPMGGLVLSKRIAEALVEQ--GG--------------------VF 320 (460)
T ss_pred ccCCCcCchhhhhhhcCCCCCeEEE--cccccccccceEEEEECHHHHHHHhcC--CC--------------------cc
Confidence 85 332211 111223699975 49666211 268888888876554321 00 00
Q ss_pred ccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHH-HHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 326 FEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIA-SLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 326 ~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~-~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
...+| .|..+.++..++++.+.+. .+.++.. ++.++|++.|+++.. ...+++.-.. .+.++.+
T Consensus 321 ~~~~T~~gnPl~~Aaala~L~~i~~~---~l~~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vrG------~Gl~~gi 386 (460)
T PRK12403 321 AHGLTYSGHPVAAAVAIANLKALRDE---GVVTRVKDDTGPYLQRCLREVFG-----DHPLVGEVQG------AGLVAAL 386 (460)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHh-----cCCCEEeEee------cceEEEE
Confidence 01223 4566677777788887664 3566775 777888777765421 1112222111 2677777
Q ss_pred EeeCCCC--CccC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceE
Q 010538 403 NLKRPDG--SWFG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAI 475 (508)
Q Consensus 403 ~~~~~~~--~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 475 (508)
.+..... ..+. ...+.+.+.++|+.+.+. .+.+
T Consensus 387 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------------------~~~~ 426 (460)
T PRK12403 387 QFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----------------------------------------LGRM 426 (460)
T ss_pred EEccCccccccccchhHHHHHHHHHHHhCCEEEEec----------------------------------------CCEE
Confidence 7743211 1111 112344556789998641 2458
Q ss_pred EEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 476 RVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 476 Ris~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
|+++.+-.|++|++++++.+.+.++-+
T Consensus 427 ~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 427 IMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988765
No 328
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=7.4e-11 Score=124.11 Aligned_cols=349 Identities=13% Similarity=0.104 Sum_probs=197.2
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC-CCCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA-SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~~~~~~i~~t~g 111 (508)
++.-|+|..+. +--+|.+++++.+++ ... ........ ......++-+++++++.. ..+ .+.|+++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql-~~~-~~~~~~~~----~~~~~~~la~~l~~~~p~~~~~--~~~f~~s 109 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQL-DQF-THTAYQIV----PYASYVTLAERINALAPIDGPA--KTAFFTT 109 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHH-hhc-cccccccc----CChHHHHHHHHHHHhCCCCCCc--eEEEeCC
Confidence 78889997443 556888888876544 321 11111101 112233444666677653 234 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEeccc-ccchHHHHHHHHh-----cC-----CeEEEEccCCccCcccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMEN-HNSVLGIREYALS-----QG-----AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~-h~s~~~~~~~~~~-----~G-----~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
+|+|+..++.... ..+...|+..... |............ .+ ..+..+|......-. .-
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------~~ 179 (421)
T PRK06777 110 GAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGV----------SV 179 (421)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCc----------CH
Confidence 9999988766432 3344566665543 3333333221100 00 011122211100000 00
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcc-ccC---HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGS-RFN---LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC- 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~-~~~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~- 254 (508)
..+++.++ +.+++. ...+++..|++..+....|. +.| +++|.++|++ +|+++|+|+++..
T Consensus 180 ~~~~~~l~--~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~------------~g~llI~DEv~tg~ 244 (421)
T PRK06777 180 EEALSSVE--RLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDE------------HGILLIADEVQTGF 244 (421)
T ss_pred HHHHHHHH--HHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEechhhCC
Confidence 11244455 444210 11356788889888888886 456 4455555554 9999999999873
Q ss_pred CCCC--CCCC--CCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 255 VTQP--PDLS--KYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 255 g~~~--~d~~--~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
|... .... ....|+++ +.|.++ + | +|+++.++++.+.+.+...+. .
T Consensus 245 gr~g~~~~~~~~~~~pDiv~--~sK~l~-~-G~pigav~~~~~i~~~~~~~~~~~------------------------T 296 (421)
T PRK06777 245 ARTGKLFAMEYYDVKPDLIT--MAKSLG-G-GMPISAVVGRAEVMDAPAPGGLGG------------------------T 296 (421)
T ss_pred ccCCchhhhhhcCCCCCEEe--eehhhc-C-CCceEEEEEcHHHHhccCCCCCCC------------------------C
Confidence 2211 1112 22467664 669887 4 4 899999988876554331110 1
Q ss_pred CCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCC
Q 010538 329 GTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPD 408 (508)
Q Consensus 329 gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 408 (508)
...|....++..++++.+.+ +.+.++.+++.++|.+.|+++.. ..+.+.-+.+ .+.++.+.+....
T Consensus 297 ~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~--~~~~i~~vrg---------~G~~~~i~~~~~~ 362 (421)
T PRK06777 297 YAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKA--SCPAIVDIRA---------RGSMVAVEFNDPQ 362 (421)
T ss_pred CCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHH--hCCCeEEecC---------ceEEEEEEEecCc
Confidence 12355566777778887655 56788899999999999987521 0122222222 1555565554321
Q ss_pred CCccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 409 GSWFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 409 ~~~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
...-+ ...+.+.+.++||.+.++.. ..+++|+++.+-.|.
T Consensus 363 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~-------------------------------------~g~~lr~~ppl~i~~ 405 (421)
T PRK06777 363 TGKPSPEFTRQYQRQALEEGLLLLSCGV-------------------------------------HGNVIRFLYPLTIPD 405 (421)
T ss_pred cCCccHHHHHHHHHHHHhCCeEEeecCC-------------------------------------CCCEEEEeCCCCCCH
Confidence 10000 12355556789999977421 136899999888999
Q ss_pred HHHHHHHHhhhhhh
Q 010538 486 EDAKVNRCSSFDFV 499 (508)
Q Consensus 486 eev~~l~~~~~~~~ 499 (508)
++++++++++.+++
T Consensus 406 ~~i~~~~~~l~~~l 419 (421)
T PRK06777 406 AQFSKALNILTRLL 419 (421)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988775
No 329
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=2.3e-10 Score=121.17 Aligned_cols=354 Identities=11% Similarity=0.042 Sum_probs=199.8
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++..|+|..+ .|--+|.+++++.++.. .. ....... .......++-+++++.+... .+ .+.|+++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~-~~~~~~~----~~~~~~~~la~~l~~~~p~~~~~--~v~f~~s 125 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVA-RF-THTCFMV----TPYEGYVAVAEQLNRLTPGDHEK--RSALFNS 125 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHH-hc-cCccccc----cCCHHHHHHHHHHHHhCCCCCCC--EEEEeCC
Confidence 7888999844 44558888888766542 21 1111100 01233445566677776533 24 7899999
Q ss_pred hHHHHHHHHhhc-CCCCCCeEEEecccccchH-HHHHHHH-----hcC-----CeEEEEccCCcc-Cccccccccccccc
Q 010538 112 ATAALKLVGEAF-PWSHQSSYMYTMENHNSVL-GIREYAL-----SQG-----AAAFAIDVEEAV-DNDGLSESLVTSTK 178 (508)
Q Consensus 112 ~t~al~~~~~~l-~~~~g~~vl~~~~~h~s~~-~~~~~~~-----~~G-----~~v~~v~~~~~~-~~~~l~~~~~~~~~ 178 (508)
+++|+..++... ...+.++||+....|.+.. ....... +.+ ..+..+|..... ..... .......
T Consensus 126 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 203 (443)
T PRK06058 126 GAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGL--ATDGEEA 203 (443)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccccccc--ccchHHH
Confidence 999998877632 1234466776654444333 2222110 011 112222211000 00000 0000000
Q ss_pred cccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-
Q 010538 179 ISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG- 253 (508)
Q Consensus 179 ~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~- 253 (508)
.....+.++ +.+ ..+++..|++..++...|.+.| +++|.++|++ +|+++|.|+++.
T Consensus 204 ~~~~~~~l~--~~~-----~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~------------~gillI~DEV~tG 264 (443)
T PRK06058 204 AARAITVIE--KQV-----GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRE------------NGVVFIADEVQTG 264 (443)
T ss_pred HHHHHHHHH--Hhh-----CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEeccccC
Confidence 001123333 222 1356788888877777777776 5566666766 999999999986
Q ss_pred CCCCC--C--CCCCCCCcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccccc
Q 010538 254 CVTQP--P--DLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE 327 (508)
Q Consensus 254 ~g~~~--~--d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (508)
+|... . +......|+++++ |.++ . | +|++++++++.+.+.+...+.
T Consensus 265 fgRtG~~fa~~~~gv~PDiv~~g--K~l~-~-G~Pi~av~~~~~i~~~~~~~~~~~------------------------ 316 (443)
T PRK06058 265 FARTGAWFACEHEGIVPDLITTA--KGIA-G-GLPLSAVTGRAEIMDAPHPGGLGG------------------------ 316 (443)
T ss_pred CCcChhhhHHHhcCCCCCEEEEc--cccc-C-CCccEEEEEcHHHHhhccCCCCCC------------------------
Confidence 32211 1 1112346898886 9776 3 4 899999998876554331110
Q ss_pred CCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC
Q 010538 328 DGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP 407 (508)
Q Consensus 328 ~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 407 (508)
....|..+.++..++++.+.+ +++.++..++.++|.+.|+++.. ...++..-.. .+.++.+.+...
T Consensus 317 T~~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vrg------~G~~~~i~~~~~ 382 (443)
T PRK06058 317 TYGGNPVACAAALAAIETIEE---DDLVARARQIEALMTDRLRALAA-----EDDRIGDVRG------RGAMIAIELVKP 382 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHh-----hCCcEEeeec------cceEEEEEEecC
Confidence 112345556666777887655 35678888889999999877521 1112211111 266776766432
Q ss_pred CCCccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 408 DGSWFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 408 ~~~~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
....-+ ...+.+.+.++||.+.++.. ..+++|+.+.+-.|
T Consensus 383 ~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~-------------------------------------~~~~lr~~Ppl~~t 425 (443)
T PRK06058 383 GTTEPDAELTKALAAAAHAAGVIVLTCGT-------------------------------------YGNVIRLLPPLVIG 425 (443)
T ss_pred CCCCCcHHHHHHHHHHHHHCCeEEeccCC-------------------------------------CCCEEEEECCCccC
Confidence 110001 13456666789999876310 14689999999999
Q ss_pred HHHHHHHHHhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVN 500 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~ 500 (508)
++||+++++++.++++
T Consensus 426 ~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 426 DELLREGLDVLEAALA 441 (443)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988765
No 330
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.44 E-value=9.9e-11 Score=124.29 Aligned_cols=359 Identities=14% Similarity=0.125 Sum_probs=194.0
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCC-CCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASM-KDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~~i~~t~g 111 (508)
++.-|+|..+ .|--+|.+++++.+++. ... ....... ......++-+++++++.... + .+.|+++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~~-~~~~~~~----~~~~~~~la~~L~~~~p~~~~~--~v~f~~s 123 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVD-QYI-HTGFNVM----MYEPYIELAEKLAALAPGSFDK--KVLFLNS 123 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHH-hcc-Ccccccc----ccHHHHHHHHHHHHhCCCCCCC--EEEEcCC
Confidence 7788999743 35568889888766543 211 1111000 12334455666777775432 4 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEeccc-ccchHHHHHHHHh-------cC---CeEEEEccCCccCc-cccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMEN-HNSVLGIREYALS-------QG---AAAFAIDVEEAVDN-DGLSESLVTSTK 178 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~-h~s~~~~~~~~~~-------~G---~~v~~v~~~~~~~~-~~l~~~~~~~~~ 178 (508)
+|+|+..++.... ..+...||..... |......+..... ++ ..+..+|....... ..+ . ...
T Consensus 124 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~ 198 (451)
T PRK06918 124 GAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGL----T-EEQ 198 (451)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccC----c-hHH
Confidence 9999988776442 2344566665443 3333333221100 00 11222332110000 000 0 000
Q ss_pred c-ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHH-HHHHHcCCccccccCCCCCCCeEEEEecccc-CC
Q 010538 179 I-SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDL-INIMKKNPERILEISPFSKGRWMVLIDAAKG-CV 255 (508)
Q Consensus 179 ~-~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~-i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g 255 (508)
. ..-.+.++ +.+.. ....+++..|++.-++...|.+.|.++ +.++.+ +|+++|+++|+|+++. ++
T Consensus 199 ~~~~~~~~~~--~~~~~-~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~---------l~~~~gillI~DEV~tg~g 266 (451)
T PRK06918 199 YDDFMIEEFK--NFFIS-EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRN---------ICSEHGILFVADEIQTGFA 266 (451)
T ss_pred HHHHHHHHHH--HHHHh-hcCCCceEEEEECcccCCCCCccCCHHHHHHHHH---------HHHHcCCEEEEeccccCcC
Confidence 0 00011222 11100 011346788888877777788777443 333333 4445999999999976 33
Q ss_pred CC--CCCCCCCC--CcEEEEeccccccCCCc--ceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 256 TQ--PPDLSKYP--VDFVVMSFYKIFGYPTG--LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 256 ~~--~~d~~~~~--~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
.. +..+..++ .|++ +++|.++ + | +|++++++++.+.+.+...+. ..
T Consensus 267 r~g~~~a~~~~~v~pDi~--t~sK~l~-~-G~pig~v~~~~~i~~~~~~~~~~~------------------------T~ 318 (451)
T PRK06918 267 RTGKYFAIEHFDVVPDLI--TVSKSLG-A-GVPISGVIGRKEIMDESAPGELGG------------------------TY 318 (451)
T ss_pred ccCceehhHhcCCCCCEE--eeehhhc-C-CCccEEEEEcHHHHhccCCCCcCc------------------------CC
Confidence 22 22223333 6755 5679888 5 4 899999988876554321110 11
Q ss_pred CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEee-CCC
Q 010538 330 TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLK-RPD 408 (508)
Q Consensus 330 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~ 408 (508)
..+....++..++++++.+. .+.++.+++.+++.+.|+++.. ..+.+.-+.. .+.+..+.+. +.+
T Consensus 319 ~g~~l~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~l~~l~~--~~~~~~~vrg---------~G~~~~~~~~~~~~ 384 (451)
T PRK06918 319 AGSPLGCAAALAVLDIIEKE---NLNDRAIELGKVVMNRFEEMKN--KYNCIGDVRG---------LGAMCAFELVQDRK 384 (451)
T ss_pred CcCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHh--hCCCceeecc---------ceeEEEEEEccCCC
Confidence 23444555666677877553 4556777788888888876521 0011111111 1455555542 111
Q ss_pred ---CCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 409 ---GSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 409 ---~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
........+.+.+.++||.+.++.. ..+.+|+++..-.|.
T Consensus 385 ~~~~~~~~~~~l~~~~~~~Gvlv~~~~~-------------------------------------~~~~lrl~p~l~~t~ 427 (451)
T PRK06918 385 TKEPDKTLTANICKEANKRGLLLLSAGT-------------------------------------YGNVIRVLMPLVITD 427 (451)
T ss_pred cCCCcHHHHHHHHHHHHHCCeEEeecCC-------------------------------------CCCEEEEECCCccCH
Confidence 0101123466667889999977421 136899999887899
Q ss_pred HHHHHHHHhhhhhhhh
Q 010538 486 EDAKVNRCSSFDFVNF 501 (508)
Q Consensus 486 eev~~l~~~~~~~~~~ 501 (508)
++++.+++.|.+.++-
T Consensus 428 ~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 428 EQLEEGLTIIEESLQA 443 (451)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988754
No 331
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.43 E-value=1.3e-11 Score=129.60 Aligned_cols=275 Identities=14% Similarity=0.091 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCcc
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAV 164 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~ 164 (508)
...++.+.+|+.+|++.. ..+++|+|.|+..++.++ .++||.||+....|-|+...+-++ |+..+++....+.
T Consensus 71 ~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~-~~~GD~VLvdRN~HKSi~~glila---Ga~Pvyl~p~~np 143 (557)
T COG1982 71 PIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAV-LTPGDKVLVDRNCHKSIHHGLILA---GATPVYLEPSRNP 143 (557)
T ss_pred cHHHHHHHHHHHhCCCce---EEEECCccHHHHHHHHhh-cCCCCEEEecCCccHHHHHHHHHc---CCceEEecCCCCc
Confidence 467889999999999876 677899999999999998 799999999999999988775544 8888877544321
Q ss_pred ---CccccccccccccccccchhhhhcCCCCCCCCCCCCCc-eEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 165 ---DNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAY-NLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 165 ---~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t-~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
-+-.+ +.+.++ +++.++ +.. ++++++. .+..|+++++++|.+.++.
T Consensus 144 ~~gi~ggI------------~~~~~~--~~l~~~----~~~~k~~vitn-pTYdGv~~n~~~i~~~~~~----------- 193 (557)
T COG1982 144 LYGIIGGI------------PLETFK--EALLAH----PDAEKLAVITN-PTYDGVCYNLRKIVELLHH----------- 193 (557)
T ss_pred cccccCCC------------CHHHHH--HHHHhC----hhhheeEEEec-CccceEeecHHHHHHHHhh-----------
Confidence 11111 567776 444321 233 6777776 4678999999999999997
Q ss_pred CCCeEEEEeccccC-----CCCCCCCCCCCCcEEEEeccccccCCCcceEEEEech-hH--hhhccccccCceEEecccc
Q 010538 241 KGRWMVLIDAAKGC-----VTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRND-AA--KLLKNTYFSGGTVAASIAD 312 (508)
Q Consensus 241 ~~g~~vivD~a~~~-----g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~-~~--~~l~~~~~g~~~~~~~~~~ 312 (508)
.++|+.+|.+|.+ +..|....+.+.|+++-|.||.+++-.-...+.+++. .+ +++...
T Consensus 194 -~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea------------- 259 (557)
T COG1982 194 -YGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEA------------- 259 (557)
T ss_pred -cCceEEhhhcCcccccccccCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHH-------------
Confidence 8999999999875 2222222235789999999998885544677777652 11 111111
Q ss_pred hhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHH---HHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCC
Q 010538 313 IDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAI---CRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTS 389 (508)
Q Consensus 313 ~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i---~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~ 389 (508)
-..+.+.+|+++.++++..|-.+....|.... .....+.++.+++...++. ++.++.+...
T Consensus 260 ----------~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~------~~~~~~~~~~ 323 (557)
T COG1982 260 ----------LMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIG------FFPVLQPEKL 323 (557)
T ss_pred ----------HHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC------Ceeecccccc
Confidence 22344567888888888886555555554332 5677788888888887773 6777776531
Q ss_pred CcccC------C-------CCceEEEEeeCCCCCccCHHHHHHHHhhCCCeec
Q 010538 390 EVSYH------D-------TGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLR 429 (508)
Q Consensus 390 ~~~~~------~-------~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 429 (508)
-.+.. - -+.=+++..+ ...+....+.+.|+++||...
T Consensus 324 ~~~~~whgf~~~~~~~~~lDP~Klti~tp---~~Gipg~~v~~~L~e~gii~e 373 (557)
T COG1982 324 DPPTGWHGFEDYADDQYFLDPTKLTITTP---EFGIPGAIVAKYLREHGIIPE 373 (557)
T ss_pred CCcccccccccccccceeccccEEEEecC---CCCCcHHHHHHHHHHcCCeee
Confidence 00000 0 0111223322 223555679999999999864
No 332
>PRK07678 aminotransferase; Validated
Probab=99.43 E-value=9.4e-11 Score=124.24 Aligned_cols=364 Identities=9% Similarity=0.026 Sum_probs=199.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+.-+|.+++++.++.. .....+. .+ ......++.+.++++++.. . .+.|++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~~~~~~-~~-----~~~~~~~lae~l~~~~~~~-~--~v~f~~sG 114 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLK-TLSYFPL-TQ-----SHEPAIKLAEKLNEWLGGE-Y--VIFFSNSG 114 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHH-hcCcccc-cc-----CCHHHHHHHHHHHHhCCCC-C--EEEEeCCc
Confidence 7889999743 35558889888766543 2211111 11 1122345566677777543 4 79999999
Q ss_pred HHHHHHHHhhcC-C-----C-CCCeEEEecccccc-hHHHHHHHHh------c---CCeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-W-----S-HQSSYMYTMENHNS-VLGIREYALS------Q---GAAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-~-----~-~g~~vl~~~~~h~s-~~~~~~~~~~------~---G~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . + +..+||.....|-. .......... + ...+..+|........ .. ..
T Consensus 115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ 190 (451)
T PRK07678 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMP-GI---ES 190 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcccccc-cc---CC
Confidence 999988766532 1 1 23566665543332 3222221100 0 0112223321110000 00 00
Q ss_pred cccc-ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEec
Q 010538 176 STKI-SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDA 250 (508)
Q Consensus 176 ~~~~-~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~ 250 (508)
.... ...++.++ +.+.+ ...+++..|++.-+....|.+.| ++++.++|++ +|+++|+|+
T Consensus 191 ~~~~~~~~~~~l~--~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~------------~g~llI~DE 254 (451)
T PRK07678 191 EDIYDLECVKEID--RVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK------------HGALLISDE 254 (451)
T ss_pred hHHHHHHHHHHHH--HHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH------------cCCEEEEee
Confidence 0000 00122233 33321 12357889999888888898887 4456666665 999999999
Q ss_pred ccc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccc
Q 010538 251 AKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEE 324 (508)
Q Consensus 251 a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (508)
++. +|..- .+.-....|+++++ |.+|+- .-+|.+.+++++.+.+.+....+ .
T Consensus 255 V~tGfGRtG~~~~~~~~gv~PDivt~g--K~lggG~~Pi~av~~~~~i~~~~~~~~~~~--------------------~ 312 (451)
T PRK07678 255 VICGFGRTGKAFGFMNYGVKPDIITMA--KGITSAYLPLSATAVKKEIYEAFKGKGEYE--------------------H 312 (451)
T ss_pred hhhcCCcCchhHHHHhcCCCCCEEEee--cccccCCcceeEEEEcHHHHHHHhccCccc--------------------c
Confidence 984 44321 11112247999886 976631 01799999999876554321000 0
Q ss_pred cccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 325 LFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 325 ~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
-...+| -|...+++..++++.+.+. .+.++..++.++|.+.|+++.. ...++.... -++.++.+
T Consensus 313 ~~h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~-----~~~~v~~vr------g~Gl~~~i 378 (451)
T PRK07678 313 FRHVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELG-----EHPLVGDIR------GKGLLVGI 378 (451)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHh-----cCCCEEEEE------eeceEEEE
Confidence 001122 3455666667788877653 5677888888888888864311 111111111 12667777
Q ss_pred EeeCCCCC-c-cC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 403 NLKRPDGS-W-FG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 403 ~~~~~~~~-~-~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
.+...... . .+ ...+.+.+.++||.+.+.. ...+. ..+.+|+
T Consensus 379 ~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g-~~v~~--------------------------------~~~~lrl 425 (451)
T PRK07678 379 ELVNDKETKEPADNDKVASVVAACKEKGLIIGKNG-DTVAG--------------------------------YNNVLTL 425 (451)
T ss_pred EEecCCcccCcCchHHHHHHHHHHHHCCcEEeecC-ccccC--------------------------------CCCEEEE
Confidence 76421110 0 01 2356777888999986421 00000 1367999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
++.+-+|++||+++++++.+.++-
T Consensus 426 ~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 426 SPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999887753
No 333
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=2.1e-10 Score=121.29 Aligned_cols=357 Identities=13% Similarity=0.062 Sum_probs=199.1
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCC-CCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNAS-MKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~~i~~t~g 111 (508)
++.-|+|..+. |--+|.+++++.+++. ... ....... ......++.+++++.+... .+ .+.|+++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-~~~-~~~~~~~----~~~~~~~lAe~L~~~~p~~~~~--~v~f~~S 123 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAE-KFL-HYSLTDF----YYEPAVELAERLVEIAPGGFEK--KVFFTNS 123 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHH-hcc-CccCccc----CCHHHHHHHHHHHHhCCCCCCC--EEEECCc
Confidence 67889997443 3446888888766543 211 1111000 1223445666677776432 34 7999999
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEecccc-cchHHHHHHHHh-------cC---CeEEEEccCCccCcccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMENH-NSVLGIREYALS-------QG---AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~h-~s~~~~~~~~~~-------~G---~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
+|+|+..++.... ..+..+|+.....| ......+..... ++ ..+..+|........ +. ........
T Consensus 124 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 201 (441)
T PRK05769 124 GTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNP-WG-IENPEECG 201 (441)
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcccccc-cc-CCchHHHH
Confidence 9999988776432 23445677665433 333333221100 00 112233321100000 00 00000000
Q ss_pred ccchhhhhcCC-CCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-
Q 010538 180 SLLPIQRRKGA-SFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG- 253 (508)
Q Consensus 180 ~~d~~~l~~~~-~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~- 253 (508)
....+.++ + .+++ ....+++..|++..+....|.+.| ++++.++|++ +|+++|+|++++
T Consensus 202 ~~~~~~le--~~~~~~-~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~------------~g~lli~DEv~tG 266 (441)
T PRK05769 202 NAVLDFIE--DYLFKK-LVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK------------YGILLIDDEVQTG 266 (441)
T ss_pred HHHHHHHH--HHHHhh-ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEechhhC
Confidence 00123344 3 1111 011356899999999999999999 8888888887 999999999987
Q ss_pred CCCCC--CCCCC--CCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 254 CVTQP--PDLSK--YPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 254 ~g~~~--~d~~~--~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
+|... +.... ...|++++| |.+++-..+|+++++++.... .+...+. ..
T Consensus 267 ~gr~G~~~a~~~~gv~pDivt~~--K~l~~G~p~gav~~~~~i~~~-~~~~~~~----------------------T~-- 319 (441)
T PRK05769 267 MGRTGKMFAIEHFGVEPDIITLA--KAIAGGLPLGAVIGRAELMFL-PPGSHAN----------------------TF-- 319 (441)
T ss_pred CCcccceehhhccCCCCCEEEEc--ccccCCcccEEEEEehhhhhc-CCCCCCC----------------------CC--
Confidence 33221 11112 235888754 966632237888888887532 1111000 01
Q ss_pred CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC
Q 010538 330 TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG 409 (508)
Q Consensus 330 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 409 (508)
+.+...+++..++++.+.+ ++.++..++.++|++.|+++.. ...++.... -.+.++.+.+.+...
T Consensus 320 ~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~-----~~~~~~~vr------g~G~~~~i~~~~~~~ 384 (441)
T PRK05769 320 GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKE-----KYEFIGDVR------GLGLMIGVELVKDRK 384 (441)
T ss_pred CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH-----hCCCeeeee------cceEEEEEEeccCCc
Confidence 1244556666677887654 6678888899999998876520 111222111 126677777643211
Q ss_pred C--ccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHH
Q 010538 410 S--WFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFED 487 (508)
Q Consensus 410 ~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ee 487 (508)
. .-....+.+.+.++||.+.+. ....+|+++.+..|++|
T Consensus 385 ~~~~~~~~~~~~~~~~~Gil~~~~---------------------------------------~~~~lr~~p~l~~t~~~ 425 (441)
T PRK05769 385 EPDPKLRDKVLYEAFKRGLLLLGA---------------------------------------GKSAIRIIPPLIITEEE 425 (441)
T ss_pred cccHHHHHHHHHHHHhCCcEEecC---------------------------------------CCCEEEEeCCCCCCHHH
Confidence 0 001134667777899998541 13679999999999999
Q ss_pred HHHHHHhhhhhhhh
Q 010538 488 AKVNRCSSFDFVNF 501 (508)
Q Consensus 488 v~~l~~~~~~~~~~ 501 (508)
|+++++++.+.++.
T Consensus 426 id~~~~~l~~~l~~ 439 (441)
T PRK05769 426 ADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887753
No 334
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.42 E-value=1e-10 Score=123.00 Aligned_cols=351 Identities=10% Similarity=0.039 Sum_probs=199.1
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+. +--+|.+++++.++. ..........+ ......++.+++++++....+ .+.|++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~-~~~~~~~~~~~-----~~~~~~~la~~L~~~~p~~~~--~v~f~~SG 112 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQI-DAMSHVMFGGI-----THPPAIELCRKLVAMTPQPLE--CVFLADSG 112 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHH-hhcCCcccccc-----CCHHHHHHHHHHHhhCCCCcC--EEEEeCCc
Confidence 78889997542 455788888876644 32211111000 122344556667777654445 79999999
Q ss_pred HHHHHHHHhhcC-C-----CCCCeEEEecccc-cchHHHHHHHH-------hcC---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-W-----SHQSSYMYTMENH-NSVLGIREYAL-------SQG---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-~-----~~g~~vl~~~~~h-~s~~~~~~~~~-------~~G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . .+..+||.....| ........... .++ ..+..+|.......++.
T Consensus 113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------ 186 (428)
T PRK07986 113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEW------ 186 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhh------
Confidence 999988766432 1 2345676665443 32222221100 000 01112221100000000
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC-CCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEec
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE-CNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDA 250 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~ 250 (508)
-.-|+++++ +.+++ ..+++..|++..+ +...|.+.| +++|.++|++ +|+++|+|+
T Consensus 187 ---~~~d~~~l~--~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~------------~g~lLI~DE 246 (428)
T PRK07986 187 ---DERDIAPFA--RLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDR------------EGILLIADE 246 (428)
T ss_pred ---HHHHHHHHH--HHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHH------------cCCEEEEec
Confidence 001345555 44432 1346677887764 555566544 4566666666 999999999
Q ss_pred ccc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccc
Q 010538 251 AKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEE 324 (508)
Q Consensus 251 a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (508)
+|. +|..- .+......|++++ .|.+++- .-+|.+++++++.+.+.+...+. + ..
T Consensus 247 v~tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~-----------~-------~~ 306 (428)
T PRK07986 247 IATGFGRTGKLFACEHAGIAPDILCL--GKALTGGTMTLSATLTTREVAETISNGEAGC-----------F-------MH 306 (428)
T ss_pred cccCCccCCCeeeecccCCCCCEEEe--chhhhCCcccCcchhchHHHHHHhhcCCCCc-----------c-------cc
Confidence 984 22211 1222234688864 5966521 12677788888876654311000 0 00
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEe
Q 010538 325 LFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNL 404 (508)
Q Consensus 325 ~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (508)
. ...+.|....++..++++.+.+. .+.++..++.++|.+.|+++.. .+.+ ++-. -++.++.+.+
T Consensus 307 ~-~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~---~~~i---~~vR------g~Gl~~~ve~ 370 (428)
T PRK07986 307 G-PTFMGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRD---APMV---ADVR------VLGAIGVVET 370 (428)
T ss_pred C-CCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhc---CCCE---EeEe------ccceEEEEEe
Confidence 0 01123456677777788887664 4578888999999998887520 1222 2111 1267777777
Q ss_pred eCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 405 KRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 405 ~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
.... ....+.+.+.++|+.+++. .+.+|+.+.+-.|
T Consensus 371 ~~~~----~~~~~~~~l~~~Gl~~~~~----------------------------------------g~~i~~~Ppl~it 406 (428)
T PRK07986 371 TRPV----NMAALQRFFVEQGVWIRPF----------------------------------------GKLIYLMPPYIIL 406 (428)
T ss_pred CCcc----cHHHHHHHHHHCCcEEEec----------------------------------------CCEEEEeCCCCCC
Confidence 5431 2235788888999998651 3579999999999
Q ss_pred HHHHHHHHHhhhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~~~ 503 (508)
++|++++++.+.+.++---
T Consensus 407 ~~ei~~~~~~l~~~l~~~~ 425 (428)
T PRK07986 407 PEQLQRLTAAVNRAVQDET 425 (428)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9999999999998775433
No 335
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.42 E-value=1.4e-10 Score=116.39 Aligned_cols=323 Identities=11% Similarity=0.043 Sum_probs=210.6
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCceEEEcC--ChHHHH--HHHHhhcCC----CCCCeEEEecccccchHHHHHHHHhc
Q 010538 80 LATCDIVRAAREQVLDYFNASMKDYKCIFTS--GATAAL--KLVGEAFPW----SHQSSYMYTMENHNSVLGIREYALSQ 151 (508)
Q Consensus 80 ~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~--g~t~al--~~~~~~l~~----~~g~~vl~~~~~h~s~~~~~~~~~~~ 151 (508)
....+++.++.+++.++.|.+. |.+.+ |+..=+ .++++++.. ...+++|+++..|.+.-+.+.++
T Consensus 105 qG~l~li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~--- 177 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMA--- 177 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhc---
Confidence 4467788899999999999874 45543 333211 234444422 24578999999998887776665
Q ss_pred CCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccc-cCHHHHHHHHcCC
Q 010538 152 GAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSR-FNLDLINIMKKNP 230 (508)
Q Consensus 152 G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~-~~i~~i~~l~~~~ 230 (508)
|.+|+.|+.++++.+ |+++|+ +.+ .+++..+.++.+++- |.. -++.+|++++|+
T Consensus 178 G~~VV~V~~~~~G~V---------------DlddLk--~k~------~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~- 232 (496)
T COG1003 178 GFKVVVVKCDENGNV---------------DLDDLR--AKA------EDNLAALMITNPSTL-GVFEEDIREICEIVHE- 232 (496)
T ss_pred CceEEEEecCCCCCc---------------cHHHHH--HHh------ccceeEEEeccCccc-ccchhhHHHHHHHHHH-
Confidence 999999999999988 689998 443 578999999998664 554 569999999998
Q ss_pred ccccccCCCCCCCeEEEEecccc---CCCCCCCCCCCCCcEEEEeccccccCCCc-----ceEEEEechhHhhhcccccc
Q 010538 231 ERILEISPFSKGRWMVLIDAAKG---CVTQPPDLSKYPVDFVVMSFYKIFGYPTG-----LGALIMRNDAAKLLKNTYFS 302 (508)
Q Consensus 231 ~~~~~~~~~~~~g~~vivD~a~~---~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-----~G~l~~~~~~~~~l~~~~~g 302 (508)
+|..|..|||.. +|. ....++|.|++-..+||+|+.|.| .|=+.++..+ .|...+
T Consensus 233 -----------~Gg~vY~DGANlNA~vG~--~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L----~pfLP~ 295 (496)
T COG1003 233 -----------AGGQVYYDGANLNAIVGL--ARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHL----APFLPG 295 (496)
T ss_pred -----------cCCEEEecCcchhhhhcc--ccccccccceEEeecccccccCCCCCCCCCCceehHhhc----cccCCC
Confidence 999999999854 232 223456799999999999886654 6777777554 343333
Q ss_pred Cc----eEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 010538 303 GG----TVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGA 378 (508)
Q Consensus 303 ~~----~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~ 378 (508)
.. ...+.. ++..........-..|+ ++-+.-.++-+..+...|+++..+...-.++|+...|+..
T Consensus 296 p~~~~~~~~y~~---~~~~~~s~g~~~a~~Gs--~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~------ 364 (496)
T COG1003 296 PVVYHDVGEYRL---DYDGKKSIGVSAAPYGS--ASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY------ 364 (496)
T ss_pred CcccCCCccccc---cCCCCccceeeccccCc--chHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc------
Confidence 10 000000 00000000000011122 2222223344566667788999999999999999999864
Q ss_pred ceEEE-ecCCCCCcccCCCCceEEEEeeC-CCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhc
Q 010538 379 DVCTI-YGTYTSEVSYHDTGSMVSFNLKR-PDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEA 456 (508)
Q Consensus 379 ~~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~ 456 (508)
+.+ +.+... ..+-+.+.... .+...+...++.++|.+.|+..-+-++.
T Consensus 365 --y~~~y~~~~~------~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FP---------------------- 414 (496)
T COG1003 365 --YPVPYTGENR------VAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFP---------------------- 414 (496)
T ss_pred --CccccCCCCc------ceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCc----------------------
Confidence 444 333211 13333333331 1222366778999999999986553321
Q ss_pred CCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhhh
Q 010538 457 GHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~~ 504 (508)
-...+.+=|=+.---+.+++|+++++|..+.+..+.
T Consensus 415 ------------liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 415 ------------LIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred ------------cccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112577888888888999999999999999877653
No 336
>PRK06105 aminotransferase; Provisional
Probab=99.40 E-value=3e-10 Score=120.71 Aligned_cols=363 Identities=13% Similarity=0.058 Sum_probs=203.9
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+. +--+|.+++++.++...-.+....+.+ ......++.+++++++..+.+ .+.|++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 118 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHK-----SHGPVIDLAEKLVAMAPVPMS--KVFFTNSG 118 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeeccccc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 78899997543 345888888876654321000111111 123344566777777755445 79999999
Q ss_pred HHHHHHHHhhcC------C-CCCCeEEEec-ccccchHHHHHHHH------hcC---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP------W-SHQSSYMYTM-ENHNSVLGIREYAL------SQG---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~------~-~~g~~vl~~~-~~h~s~~~~~~~~~------~~G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... - ....+||... .-|........... ..| ..+..+|...........+ ..
T Consensus 119 seAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~ 196 (460)
T PRK06105 119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGE--SE 196 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCC--Ch
Confidence 999988877631 0 1234566554 33443333221110 011 1122222211000000000 00
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
........++++ +.+.+ ...+++..|++..+....|.+.| ++.+.++|++ +|+++|+|++
T Consensus 197 ~~~~~~~~~~le--~~~~~--~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~------------~~~llI~DEv 260 (460)
T PRK06105 197 EAFATRLANELE--ALILA--EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRK------------YDILLVADEV 260 (460)
T ss_pred HHHHHHHHHHHH--HHHHH--cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCeEEEecc
Confidence 000000123444 33321 11246788999888888899888 6677777776 9999999999
Q ss_pred cc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccc
Q 010538 252 KG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEEL 325 (508)
Q Consensus 252 ~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (508)
|. +|..- .+......|++++| |.+++- ..+|.+++++++.+.+.+.....+ ..
T Consensus 261 ~tG~GRtG~~f~~~~~~v~PDi~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~-------------------~~ 319 (460)
T PRK06105 261 ICGFGRTGNMFGCETFGIKPDILVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIG-------------------TF 319 (460)
T ss_pred ccCCCcCchhhhHHhcCCCCCeeeee--cccccCcccceEEEEcHHHHHHHhcccccCc-------------------cc
Confidence 84 54321 12222347888776 976621 017889999888665543200000 00
Q ss_pred ccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 326 FEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 326 ~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
...+| -|....++..++++.+.+ +++.++..++.++|.+.|+++. ...++..-. -.+.++.+.
T Consensus 320 ~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~------~~~~v~~vr------G~Gl~~gie 384 (460)
T PRK06105 320 GHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALA------DHPLVGEVR------GVGLIAAVE 384 (460)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhh------cCCCeEEEE------ecceEEEEE
Confidence 01122 344556666668888776 3667888999999999988762 111121111 126677777
Q ss_pred eeCCCC--CccC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEE
Q 010538 404 LKRPDG--SWFG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIR 476 (508)
Q Consensus 404 ~~~~~~--~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iR 476 (508)
+..... ..++ ...+...+.++|+.+.+. .+.+|
T Consensus 385 ~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----------------------------------------g~~i~ 424 (460)
T PRK06105 385 LVADKATKTPFEPPGKVGARANAAAHEHGVISRAM----------------------------------------GDTLA 424 (460)
T ss_pred EecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----------------------------------------CCEEE
Confidence 643211 0011 134667778899998651 35799
Q ss_pred EecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 477 VSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 477 is~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+++.+-.|++|++++++.+.+.++.+
T Consensus 425 l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 425 FCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHH
Confidence 99999899999999999998877544
No 337
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.40 E-value=1.2e-10 Score=122.90 Aligned_cols=343 Identities=13% Similarity=0.028 Sum_probs=196.0
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. |..+|.+++++.+... ... .. +. .......+.+++++++. ..+ .+.|++|+
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~-~~~---~~-~~----~~~~~~~la~~L~~~~~-~~~--~v~~~~sG 115 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAE-KGL---SF-GA----PTELEVELAELVIELVP-SIE--MVRMVNSG 115 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHH-hCC---cC-CC----CCHHHHHHHHHHHHhCC-CCC--EEEEecCH
Confidence 56778887542 3568888888766543 211 11 11 12334567777777763 245 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHh-----cC-----CeEEEEccCCccCcccccccccccccccc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALS-----QG-----AAAFAIDVEEAVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~-----~G-----~~v~~v~~~~~~~~~~l~~~~~~~~~~~~ 181 (508)
++|+..++.... ..+++.||+....|.+...+...... .+ .....++.+ ..... -.
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------~~ 182 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKH-TLTAP------------YN 182 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccc-eEEcC------------CC
Confidence 999998887642 23456777766555444322111100 00 000000000 00000 01
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ 257 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~ 257 (508)
|++.++ +.+.+ ..+++..|++..+...+|.+.| +++|.++|++ +|+++|+|++|.....
T Consensus 183 d~~~l~--~~i~~---~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~------------~~~llI~DEv~~G~r~ 245 (426)
T PRK00062 183 DLEAVE--ELFEE---YGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDE------------HGALLIFDEVMTGFRV 245 (426)
T ss_pred CHHHHH--HHHHh---CCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEeechhcccc
Confidence 456666 44432 1356789999988888999998 7778887876 9999999999873111
Q ss_pred -C---CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCCh
Q 010538 258 -P---PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASF 333 (508)
Q Consensus 258 -~---~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 333 (508)
. .+......|++ +++|.+++-..+|++++++++.+.+.+. +. ...+...+.+.
T Consensus 246 g~~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~--~~-------------------~~~~~T~~~~p 302 (426)
T PRK00062 246 ALGGAQGYYGVTPDLT--TLGKIIGGGLPVGAFGGRREIMEQLAPL--GP-------------------VYQAGTLSGNP 302 (426)
T ss_pred CCccHHHHhCCCcchH--hhhhHhhCCCcceeeeEHHHHHHhhccC--CC-------------------ceecccCcCCH
Confidence 0 01111135654 5669777211178888888887766421 00 00011112455
Q ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc--
Q 010538 334 LSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW-- 411 (508)
Q Consensus 334 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 411 (508)
...++..++++.+.+. ++.++.+++.+++++.|+++... . ++..-.. + .+.++.+.+.......
T Consensus 303 ~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~--~-~~~~~vr-g-------~G~~~~i~l~~~~~~~~~ 368 (426)
T PRK00062 303 LAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKK--A-GIPLTVN-R-------VGSMFGLFFTDEPVTNYA 368 (426)
T ss_pred HHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHH--c-CCceEEE-E-------ecceEEEEEecCCCcchh
Confidence 5666777788877553 56777778888887777643100 0 1111101 1 1677777765321110
Q ss_pred ----cC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 412 ----FG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 412 ----~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
.+ ...+...|.++||.+.+.. .+.+|++ ..+|
T Consensus 369 ~~~~~~~~~~~~i~~~l~~~Gv~v~~~~---------------------------------------~~~~~~~--~~~t 407 (426)
T PRK00062 369 DAKKSDTERFARFFHAMLDEGVYLAPSQ---------------------------------------FEAGFVS--AAHT 407 (426)
T ss_pred hhccccHHHHHHHHHHHHHCCeEeecCC---------------------------------------cCceeee--ccCC
Confidence 01 1357788889999986521 2346665 5679
Q ss_pred HHHHHHHHHhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~ 501 (508)
++|++++++.+.+.++.
T Consensus 408 ~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 408 DEDIEKTLEAARKAFAA 424 (426)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887754
No 338
>PRK07482 hypothetical protein; Provisional
Probab=99.39 E-value=2.5e-10 Score=121.30 Aligned_cols=366 Identities=12% Similarity=0.040 Sum_probs=201.6
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+. +--+|.+++++.++...-.+..+...+ ..+...++-+++++++....+ .+.|++++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-----~~~~~~~lAe~L~~~~p~~~~--~v~f~~sG 120 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGH-----GTEASITLSKRIIDRAPAGMS--KVYYGLSG 120 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcccccccc-----CCHHHHHHHHHHHHhCCCCcC--EEEEeCch
Confidence 78899998654 455888888876654321111111011 123345556667777654445 79999999
Q ss_pred HHHHHHHHhhcC------C-CCCCeEEEecccccc-hHHHHHHH------HhcC---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP------W-SHQSSYMYTMENHNS-VLGIREYA------LSQG---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~------~-~~g~~vl~~~~~h~s-~~~~~~~~------~~~G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
|+|+..++.... - ....+||.....|-. ........ ...+ ..+..++............ ..
T Consensus 121 SEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~ 198 (461)
T PRK07482 121 SDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGM--SE 198 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCC--CH
Confidence 999988776542 1 123566665543322 22211110 0011 1122222211000000000 00
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHH----HHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLD----LINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~----~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
......+++.++ +.+.+. ..+++..|++.-+....|.+.|.+ +|.++|+ ++|+++|+|++
T Consensus 199 ~~~~~~~~~~l~--~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~------------~~giLlI~DEV 262 (461)
T PRK07482 199 EQFSAYCADELE--ELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLK------------KYDILLIADEV 262 (461)
T ss_pred HHHHHHHHHHHH--HHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHH------------HhCCEEEEecc
Confidence 000011345555 444211 135688888888888888887644 5555555 49999999999
Q ss_pred cc-CCCCC----CCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccc
Q 010538 252 KG-CVTQP----PDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEEL 325 (508)
Q Consensus 252 ~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (508)
+. +|..- .+......|+++++ |.+++-. .+|.++++++..+.+.......+ ..
T Consensus 263 ~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~-------------------~~ 321 (461)
T PRK07482 263 VTGFGRLGSMFGSDHYGIEPDLITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEHG-------------------AI 321 (461)
T ss_pred ccCCCcCcchhhHHhcCCCCCEEEEc--cccccCccccceeeecHHHHHHHhcccccCC-------------------cc
Confidence 86 33221 11112247999987 9765211 26888888887654432100000 00
Q ss_pred ccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEE
Q 010538 326 FEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 326 ~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
...+| -|..+.++..++++.+.+ +++.++.+++.++|.+.|+++.. ...++..-. -.+.++.+.
T Consensus 322 ~h~~T~~gnpl~~Aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~v~~vr------G~Glm~gie 387 (461)
T PRK07482 322 GHGWTYSGHPICAAAALANLDILER---ENLVGNAAEVGAYFRARLRAAFG-----DHPLVGEVR------GVGMLAAVE 387 (461)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHh-----cCCCEEEEe------eceeEEEEE
Confidence 01122 345566666777887765 35667788888888888875421 111111111 126677777
Q ss_pred eeCCCC--CccC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEE
Q 010538 404 LKRPDG--SWFG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIR 476 (508)
Q Consensus 404 ~~~~~~--~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iR 476 (508)
+..... ..++ ...+...+.++|+.++++. ..+.+|
T Consensus 388 l~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~--------------------------------------~~~~i~ 429 (461)
T PRK07482 388 FVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP--------------------------------------HGDILG 429 (461)
T ss_pred eccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC--------------------------------------CCCEEE
Confidence 743111 1111 1346777888999986421 036799
Q ss_pred EecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 477 VSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 477 is~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+.+.+-.|++||+++++.+.+.++.+
T Consensus 430 ~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 430 FAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887654
No 339
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.39 E-value=9.2e-12 Score=124.09 Aligned_cols=299 Identities=11% Similarity=0.090 Sum_probs=191.0
Q ss_pred CCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCC-ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 40 GTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHS-QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 40 ~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
..-|+|.-+++. .+-.+.. .++.. ..|++. .|...+-..-+...+..+..+..|.+... +-+|++|++-++.-
T Consensus 101 HprffNQl~~gl-D~~~Lag---~wlT~-t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~-DgIf~pggsisn~Y 174 (510)
T KOG0629|consen 101 HPRFFNQLSSGL-DPIGLAG---EWLTS-TANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGG-DGIFAPGGSISNMY 174 (510)
T ss_pred CCcchhhhccCC-CHHHHHH---HHHHh-ccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCC-CceecCCchhHHHH
Confidence 456777766665 5544322 22222 123432 34444545556677888889999998742 57899888877654
Q ss_pred HHhhcC---C----------CCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhh
Q 010538 119 VGEAFP---W----------SHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 119 ~~~~l~---~----------~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
++.+-. + -|.-.+.+++..|.|+.....++...--.++.|+.+..+.+ .+++
T Consensus 175 a~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm---------------~~~d 239 (510)
T KOG0629|consen 175 AMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKM---------------IPDD 239 (510)
T ss_pred HHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccCcc---------------chHH
Confidence 443321 1 12346777889999998887776443477899999988887 5788
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC-----
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD----- 260 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d----- 260 (508)
++ +.|-+....+..+.+|..++..+..|+..|++.|+++|++ |+.|++||+|-+.|..-.-
T Consensus 240 Le--~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k------------~~lWmHvDAAwGGglLmS~k~R~k 305 (510)
T KOG0629|consen 240 LE--KKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEK------------HKLWMHVDAAWGGGLLMSRKHRHK 305 (510)
T ss_pred HH--HHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHh------------cCEEEEeecccccccccChhhHhh
Confidence 87 5553333334457999999999999999999999999997 9999999999876544211
Q ss_pred CCCC-CCcEEEEeccccccCCCcceEEEEechhH-hhhccccccCceEEecccchhhh-hhccCccccccCCC-CChhHH
Q 010538 261 LSKY-PVDFVVMSFYKIFGYPTGLGALIMRNDAA-KLLKNTYFSGGTVAASIADIDFV-KRRQGVEELFEDGT-ASFLSI 336 (508)
Q Consensus 261 ~~~~-~~D~~~~S~~K~~g~P~G~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~gt-~~~~~~ 336 (508)
+.-. .+|.++.++||+.|.|--|+.++.+.+-+ ...... ...+......++ .-.+.+......|- .+..-+
T Consensus 306 l~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~-----~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKl 380 (510)
T KOG0629|consen 306 LTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQM-----SAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKL 380 (510)
T ss_pred ccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhccc-----chhhhhccCceeecccccccchhhcCccccHHHH
Confidence 1111 57899999999999888899988876642 211111 000000000011 01112233344442 333333
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 337 ASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 337 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
+-++.|- ...|.++...++.++++||.+.|++.. +...+...
T Consensus 381 WlmwkaK---G~~Gfe~~v~k~~~lA~yl~~~lrer~------~~~~l~~~ 422 (510)
T KOG0629|consen 381 WLMWKAK---GTQGFEAQVDKCLRLAEYLYDRLRERE------GFEMLFEL 422 (510)
T ss_pred HHHHHhc---ccccHHHHHHHHHHHHHHHHHHHHhcc------cceehhcC
Confidence 4333332 235889999999999999999999873 55555443
No 340
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=1.7e-10 Score=121.37 Aligned_cols=347 Identities=10% Similarity=0.059 Sum_probs=198.9
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|||..+. +--+|.+++++.++.. ... ....... ......++.+++++.+....+ .+.|++++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~~-~~~~~~~----~~~~~~~lae~L~~~~p~~~~--~v~f~~sG 113 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLA-KMS-HIMFGGF----THEPAVELAQKLLEILPPSLN--KIFFADSG 113 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHH-hcC-Ccccccc----CCHHHHHHHHHHHhhCCCCcC--EEEEeCCc
Confidence 78889997543 4558888888766442 211 1111001 122344556667776654445 89999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEeccc-ccchHHHHHHH-----Hh--cC---CeEEEEccCCccCccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTMEN-HNSVLGIREYA-----LS--QG---AAAFAIDVEEAVDNDGLSESLV 174 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~~-h~s~~~~~~~~-----~~--~G---~~v~~v~~~~~~~~~~l~~~~~ 174 (508)
++|+..++.... . .+...|+..... |.......... .+ .+ ..+..+|......-+.
T Consensus 114 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~------ 187 (429)
T PRK06173 114 SVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEE------ 187 (429)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchh------
Confidence 999988765432 1 123556666543 33222221110 00 00 0122233211000000
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC-CCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE-CNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
....+++.++ +.+.+ ..+++..|++..+ +...|.+.| ++++.++|+ ++|+++|+|
T Consensus 188 ---~~~~~l~~l~--~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~------------~~g~llI~D 247 (429)
T PRK06173 188 ---WNDEAIEPLQ--DLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCD------------QYGVLLIFD 247 (429)
T ss_pred ---HHHHHHHHHH--HHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHH------------HcCCeEEec
Confidence 0000244455 44432 1356888888875 777788765 334444455 599999999
Q ss_pred ccccC-CCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKGC-VTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~~-g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
++|.. |..- .+......|++++ .|.+++- .-++.+++++++.+.+.+.. . .
T Consensus 248 Ev~tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG~~p~~a~~~~~~i~~~~~~~~-~--------------------~ 304 (429)
T PRK06173 248 EIATGFGRTGKLFALEHAGVVPDIMCI--GKALTGGYLTLSATITTEAIAQTICSGE-A--------------------K 304 (429)
T ss_pred chhcCCCcCCcchHHHhcCCCCCEEEe--ehhhhCCccccceEEecHHHHHHHhcCC-C--------------------C
Confidence 99842 2211 1112224788875 5966521 12688888888766543210 0 0
Q ss_pred ccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
.....+| .+...+++..++++.+.+. .+.+++.++.++|.+.|+++. +...+..-. -++.++.
T Consensus 305 ~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~------~~~~v~~vR------g~Gl~~~ 369 (429)
T PRK06173 305 CFMHGPTFMANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAA------EFDSVAEVR------VLGAIGV 369 (429)
T ss_pred ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhh------cCCCeeeee------ccceEEE
Confidence 0001112 3556677777788887764 457888999999999987641 111122111 1277888
Q ss_pred EEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC
Q 010538 402 FNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY 481 (508)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 481 (508)
+.+.+.. ....+.+.|.++||.+++. .+.+|+.+.+
T Consensus 370 iel~~~~----~~~~i~~~l~e~Gi~v~~~----------------------------------------g~~l~~~Ppl 405 (429)
T PRK06173 370 VEMKEPV----NMATLQPRFVEHGIWVRPF----------------------------------------GKLVYIMPPF 405 (429)
T ss_pred EEeCCcc----cHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEeCCc
Confidence 8886431 2235888899999998652 3589999999
Q ss_pred CCCHHHHHHHHHhhhhhhhh
Q 010538 482 MSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 482 ~~t~eev~~l~~~~~~~~~~ 501 (508)
-.|++|++++++++.+.+.-
T Consensus 406 ~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 406 IISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999987753
No 341
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.38 E-value=3.7e-11 Score=121.10 Aligned_cols=359 Identities=11% Similarity=-0.013 Sum_probs=216.8
Q ss_pred eeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCC--------CceEEEcCChH
Q 010538 42 VYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMK--------DYKCIFTSGAT 113 (508)
Q Consensus 42 iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~~i~~t~g~t 113 (508)
-|+.+-.++.--|..+..++... .+..+..+...+...++..-+-.+++++++.|.. . --++.++++
T Consensus 75 ~fhAyfpa~~s~~siladmLs~~----i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~G-gGviQ~tas 149 (511)
T KOG0628|consen 75 HFHAYFPAGNSYPSILADMLSGG----IGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDG-GGVIQGTAS 149 (511)
T ss_pred ceeeEccCccchHHHHHHHHhcc----cccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCC-cceEecCcc
Confidence 34444444333344544444322 2223322333444556666688999999987533 0 123344555
Q ss_pred HHHHHHHhhcC------CCC------------CCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccccc
Q 010538 114 AALKLVGEAFP------WSH------------QSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 114 ~al~~~~~~l~------~~~------------g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++...++.+-. .+. .=++.+++..|.|+-..... .|++++.++.+.+..+
T Consensus 150 es~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i---~~VklR~l~td~n~~m--------- 217 (511)
T KOG0628|consen 150 ESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLI---AGVKLRALPTDENFGM--------- 217 (511)
T ss_pred hhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhh---cceeEEEeecccCcCC---------
Confidence 55443332211 111 12566678889887654333 4789999998875555
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCC
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCV 255 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g 255 (508)
+.+.|. ++|.+..+.+--+-+++.+-..+.+-...++++|..+|++ +|+|++||++++..
T Consensus 218 ------r~~~L~--~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~------------~glWLHVDAAYAGs 277 (511)
T KOG0628|consen 218 ------RGDTLR--KAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE------------EGLWLHVDAAYAGS 277 (511)
T ss_pred ------CHHHHH--HHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh------------cCEEEEeehhhccc
Confidence 567777 6665544444456777888888888889999999999998 99999999999843
Q ss_pred CCC-CCCCCC-----CCcEEEEeccccccCCCcceEEEEechhH-h---hhccccccCceEEecccchhhhhhccCcccc
Q 010538 256 TQP-PDLSKY-----PVDFVVMSFYKIFGYPTGLGALIMRNDAA-K---LLKNTYFSGGTVAASIADIDFVKRRQGVEEL 325 (508)
Q Consensus 256 ~~~-~d~~~~-----~~D~~~~S~~K~~g~P~G~G~l~~~~~~~-~---~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (508)
+-- ..++.+ .+|.+.+..|||+..---|..+|+++... . ...|.+..+.......+...|..+. .+|
T Consensus 278 a~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl---~rR 354 (511)
T KOG0628|consen 278 AFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPL---GRR 354 (511)
T ss_pred cccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCcccccccc---ccc
Confidence 211 111111 47999999999877444589999988731 0 1234433332211223333343221 233
Q ss_pred ccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEee
Q 010538 326 FEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLK 405 (508)
Q Consensus 326 ~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 405 (508)
|+ -.-++-.++.+.-.++.+..++..+|++.+.+.+.+- +.+++..+.- -+.++|+++
T Consensus 355 fR--------SLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d------~~FE~~~~~~--------lgLvcFRlk 412 (511)
T KOG0628|consen 355 FR--------SLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD------PRFEIVNKRI--------LGLVCFRLK 412 (511)
T ss_pred hh--------hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC------Ccceeecccc--------cceeEEeec
Confidence 32 1223344454444456666677778888888888776 4688887754 799999998
Q ss_pred CCCCCccCHHHHHHHHhh-CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC-CCC
Q 010538 406 RPDGSWFGYREVEKLASL-SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG-YMS 483 (508)
Q Consensus 406 ~~~~~~~~~~~l~~~L~~-~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~ 483 (508)
+.+. ++ ..+.+++.. ..|.+.+.+ .. ..-.+|++++ ..+
T Consensus 413 ~~N~--~n-e~Ll~~in~~g~i~l~~~~---l~---------------------------------gk~vlRf~V~s~~t 453 (511)
T KOG0628|consen 413 GDNE--IN-EALLNRLNSSGRIHLVPAS---LH---------------------------------GKFVLRFAVCSPLT 453 (511)
T ss_pred CCcH--HH-HHHHHHHHhcCcEEEEEee---ec---------------------------------ceEEEEEEecCCCC
Confidence 7532 22 335555554 456554422 10 1457999988 558
Q ss_pred CHHHHHHHHHhhhhhhhh
Q 010538 484 TFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 484 t~eev~~l~~~~~~~~~~ 501 (508)
+.+||++..+.|.+....
T Consensus 454 ~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 454 NESDIDEAWKIIFEAADE 471 (511)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 899999999988876654
No 342
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=3.8e-10 Score=119.59 Aligned_cols=363 Identities=11% Similarity=0.051 Sum_probs=202.1
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.+++. .........+ ......++-+++++.++...+ .+.|++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-~~~~~~~~~~-----~~~~~~~lAe~L~~~~p~~~~--~v~f~~sG 123 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLD-TLEHAMLAGC-----THEPAIELAERLAALTGGTLG--HAFFASDG 123 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHH-hcCCcccccc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCC
Confidence 7888999743 35668888888766543 2110011011 122334556667777665445 79999999
Q ss_pred HHHHHHHHhhcC-------CCCCCeEEEecccccc-hHHHHHHHH----h--cC---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP-------WSHQSSYMYTMENHNS-VLGIREYAL----S--QG---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~-------~~~g~~vl~~~~~h~s-~~~~~~~~~----~--~G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
|+|+..++.... ..+..+||.....|-. ......... + ++ ..+..+|........ ..+ ..
T Consensus 124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~--~~ 200 (453)
T PRK06943 124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGAR-PGE--TA 200 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccc-cCC--CH
Confidence 999988776541 1223566666544432 222221110 0 00 112233322110000 000 00
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeC-CCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPS-ECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG- 253 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~-~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~- 253 (508)
.+...-+++.++ +.+++ ..+++..|++.- ++...|.+.|-+..-+-+++ +|++||+++|+|+++.
T Consensus 201 ~~~~~~~~~~l~--~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~--------lc~~~gillI~DEV~TG 267 (453)
T PRK06943 201 ADVAARALADVR--RLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRA--------LCDRYGVHLIADEIAVG 267 (453)
T ss_pred HHHHHHHHHHHH--HHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHH--------HHHHcCCEEEeechhhC
Confidence 000001235555 44432 235788888887 47778887763322222222 4445999999999985
Q ss_pred CCCCCC----CCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 254 CVTQPP----DLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 254 ~g~~~~----d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
+|..-. +.-....|+++++ |.+++= .-+|.+++++++.+.+.+....+ ..+..
T Consensus 268 ~GRtG~~fa~~~~gv~PDivt~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~--------------------~~~~~ 325 (453)
T PRK06943 268 CGRTGTFFACEQAGVWPDFLCLS--KGISGGYLPLSLVLSRDAIFAAFYDDDVTR--------------------GFLHS 325 (453)
T ss_pred CCCCcchhHHHhCCCCCCeEeee--hhhccCcccceEEEEcHHHHHhhcccCccC--------------------CccCC
Confidence 443211 1112347999997 955521 12799999998876554210000 00112
Q ss_pred CC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeC
Q 010538 329 GT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKR 406 (508)
Q Consensus 329 gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 406 (508)
+| -|..+.++..++++.+.+. ++.++..++.++|.+.|+++.. .+.+.-+ .+ ++.++.+.+..
T Consensus 326 ~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~---~~~v~~v--rG-------~Gl~~gvel~~ 390 (453)
T PRK06943 326 HSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAA---HPQVRHL--RQ-------RGTIFAFDVAL 390 (453)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhc---CCCEEeE--ec-------cccEEEEEEcc
Confidence 22 3555666777778877663 4667888888888888877520 1223211 11 26777777752
Q ss_pred -CCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 407 -PDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 407 -~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
.+...-....+.+.+.++|+.+.+. .+.+|+++.+-.|+
T Consensus 391 ~~~~~~~~~~~i~~~~~~~Gll~~~~----------------------------------------g~~l~~~Ppl~it~ 430 (453)
T PRK06943 391 DGDAARTFSRRFFEAALERELLLRPI----------------------------------------GTTVYLMPPYVLDD 430 (453)
T ss_pred CCCcchHHHHHHHHHHHHCCcEEEec----------------------------------------CCEEEEeCCCcCCH
Confidence 1111001234677788899998641 24699999999999
Q ss_pred HHHHHHHHhhhhhhhhh
Q 010538 486 EDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 486 eev~~l~~~~~~~~~~~ 502 (508)
+||+++++.+.+.++.+
T Consensus 431 ~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 431 DEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887654
No 343
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.38 E-value=2.8e-10 Score=120.63 Aligned_cols=365 Identities=13% Similarity=0.105 Sum_probs=202.6
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+.+++.++.. ... .....+. ......++-+++++.+....+ .+.|++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~-~~~-~~~~~~~----~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 122 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVA-LIQ-HSMIGYT----HSERAIRVAEKLAEISPIENP--KVLFGLSG 122 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHH-hcc-ccccCcc----CCHHHHHHHHHHHhhCCCCcC--EEEEeCch
Confidence 6788999843 34558888888766542 211 1111111 112334456667777654445 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecc-cccchHHHHHHHH-----hcC-----CeEEEEccCCccCcc-cccccccccccc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTME-NHNSVLGIREYAL-----SQG-----AAAFAIDVEEAVDND-GLSESLVTSTKI 179 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~-~h~s~~~~~~~~~-----~~G-----~~v~~v~~~~~~~~~-~l~~~~~~~~~~ 179 (508)
++|+..++.... ..+...||.... -|........... +.+ ..+..+|........ ...+.-.+....
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 999988776542 234456666544 3443333332211 011 123444443210000 000000000000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCH----HHHHHHHcCCccccccCCCCCCCeEEEEecccc-C
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNL----DLINIMKKNPERILEISPFSKGRWMVLIDAAKG-C 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i----~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~ 254 (508)
....+.++ +.+.+.....+++..|++.-+....|.+.|. +++.++|++ +|+++|+|++|+ +
T Consensus 203 ~~~~~~le--~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~------------~g~llI~DEv~tG~ 268 (457)
T PRK05639 203 NRFLDYLE--NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE------------HGILLVMDEVQTGI 268 (457)
T ss_pred HHHHHHHH--HHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEechhhcc
Confidence 00112333 2221100113578999998888888887773 355555554 999999999987 2
Q ss_pred CCCC----CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC
Q 010538 255 VTQP----PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT 330 (508)
Q Consensus 255 g~~~----~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 330 (508)
|..- .+......|++++ .|.+++-.++|++++++++.+ .. .+.. .....
T Consensus 269 GrtG~~~a~~~~gv~PDiv~~--gK~l~gG~pi~av~~~~~i~~-~~----~~~~--------------------~~T~~ 321 (457)
T PRK05639 269 GRTGKWFASEWFEVKPDLIIF--GKGVASGMGLSGVIGRKELMD-LT----SGSA--------------------LLTPA 321 (457)
T ss_pred CcCchHHHHHhcCCCCCEEEe--chhhcCCCcceeEEehHHHHh-hc----CCCc--------------------ccCCC
Confidence 2111 1111225799996 497763234799999988865 21 1100 00112
Q ss_pred CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC-
Q 010538 331 ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG- 409 (508)
Q Consensus 331 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 409 (508)
.|....++..++++.+.+ +++.++..++.++|++.|+++.. ...++..-.. .+.++.+.+.....
T Consensus 322 g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~~~~VrG------~Gl~~gve~~~~~~~ 387 (457)
T PRK05639 322 ANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLEMKE-----SFEVIGDVRG------KGLMIGVEIVKENGK 387 (457)
T ss_pred cCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHH-----hCCCEEeecc------ceeEEEEEEecCCCC
Confidence 344556666677887765 45667788888999988877521 1222222111 26667766643211
Q ss_pred -CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHH
Q 010538 410 -SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDA 488 (508)
Q Consensus 410 -~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev 488 (508)
..-....+.+.+.++|+.+.+.. ...+.+|+++.+-.|++|+
T Consensus 388 ~~~~~~~~~~~~~~~~Gv~~~~~g-------------------------------------~~~~~lr~~Ppl~it~~~i 430 (457)
T PRK05639 388 PDPELTGKICWRAFELGLILPSYG-------------------------------------MFGNVIRITPPLVITKEIA 430 (457)
T ss_pred CCHHHHHHHHHHHHhCCeEEeecC-------------------------------------CCCCEEEEeCCCccCHHHH
Confidence 00012346777788999986520 0146899999999999999
Q ss_pred HHHHHhhhhhhhhhh
Q 010538 489 KVNRCSSFDFVNFSQ 503 (508)
Q Consensus 489 ~~l~~~~~~~~~~~~ 503 (508)
+++++++.+.++.+.
T Consensus 431 d~~~~~l~~~l~~~~ 445 (457)
T PRK05639 431 EKGLEIMERAIKDAL 445 (457)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887654
No 344
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.37 E-value=1.8e-10 Score=118.20 Aligned_cols=352 Identities=14% Similarity=0.033 Sum_probs=209.8
Q ss_pred CCCeeeeCC--CCC-CCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHH
Q 010538 39 NGTVYLDHA--GAT-LYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAA 115 (508)
Q Consensus 39 ~~~iyld~~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~a 115 (508)
.+-+|.|-- +.| .|++...++++. -++. |.. ..-+.++++.+++++|.+. +++|..++.+
T Consensus 39 s~dV~IDLrSDTgT~apS~~m~aAM~~--GDD~-------Y~g----dpSv~~Lee~vael~G~E~----alpthqGRga 101 (467)
T TIGR02617 39 SEDVFIDLLTDSGTGAVTQSMQAAMMR--GDEA-------YSG----SRSYYALAESVKNIFGYQY----TIPTHQGRGA 101 (467)
T ss_pred CCCeEEECccCCCCCCCCHHHHHHHHc--CCcc-------ccc----CchHHHHHHHHHHHhCCce----EEECCCCchH
Confidence 455666654 444 367777766643 1111 111 1225677899999999974 5889888988
Q ss_pred HHHHHhhcCCCCCCeEEEecc----cccchHH-HHHHHHhcCCeEEEEccC----------CccCccccccccccccccc
Q 010538 116 LKLVGEAFPWSHQSSYMYTME----NHNSVLG-IREYALSQGAAAFAIDVE----------EAVDNDGLSESLVTSTKIS 180 (508)
Q Consensus 116 l~~~~~~l~~~~g~~vl~~~~----~h~s~~~-~~~~~~~~G~~v~~v~~~----------~~~~~~~l~~~~~~~~~~~ 180 (508)
-+++...+..++|+++++... .|..... +...+...|+.++.++.+ .++.+
T Consensus 102 E~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~-------------- 167 (467)
T TIGR02617 102 EQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNF-------------- 167 (467)
T ss_pred HHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCc--------------
Confidence 888888885446777775443 3433333 222344568888776432 13444
Q ss_pred cchhhhhcCCCCCCCCCCCCCceEEEEeCC-CCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-----
Q 010538 181 LLPIQRRKGASFPERDPAGDAYNLFAFPSE-CNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC----- 254 (508)
Q Consensus 181 ~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~----- 254 (508)
|+++++ ++|++..+ ++...+..+-. |..-|..+|++.|.++.+ +|+++|+.++.|++--+
T Consensus 168 -dl~~le--~~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~---------la~~~GIplhLDgARl~nNA~f 233 (467)
T TIGR02617 168 -DLEGLE--RGIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYE---------IAKKYDIPVVMDSARFAENAYF 233 (467)
T ss_pred -CHHHHH--HHHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHH---------HHHHcCCcEEEEhHHHHHHhhh
Confidence 788998 88764211 12222222222 334588999888777766 66779999999997422
Q ss_pred ------CCCCCCCCC------CCCcEEEEeccccccCCCcceEEEEech----hHhhhccccccCceEEecccchhhhhh
Q 010538 255 ------VTQPPDLSK------YPVDFVVMSFYKIFGYPTGLGALIMRND----AAKLLKNTYFSGGTVAASIADIDFVKR 318 (508)
Q Consensus 255 ------g~~~~d~~~------~~~D~~~~S~~K~~g~P~G~G~l~~~~~----~~~~l~~~~~g~~~~~~~~~~~~~~~~ 318 (508)
+....++++ ..+|.+++|++|-+|.|-| |+|.++++ +.++.+....-.
T Consensus 234 Ik~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~--------------- 297 (467)
T TIGR02617 234 IKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQ--------------- 297 (467)
T ss_pred hhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhcccc---------------
Confidence 344454432 2689999999998887877 78887766 222333321100
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCc
Q 010538 319 RQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGS 398 (508)
Q Consensus 319 ~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (508)
+.....|..+.-.+-+++..|+... -+...++-....+||.+.|.+. |+.++. .+ ++
T Consensus 298 ----EGf~tYGGlagrd~ea~a~Gl~e~~---~~~yl~~ri~qv~yl~~~L~~~-------Gvpi~~-~G--------gh 354 (467)
T TIGR02617 298 ----EGFPTYGGLEGGAMERLAVGLYDGM---NLDWLAYRINQVQYLVNGLEEI-------GVVCQQ-AG--------GH 354 (467)
T ss_pred ----cCCcCcCchhHHHHHHHHhhhhhcc---cHHHHHHHHHHHHHHHHHHHhC-------CCcEEe-cC--------cc
Confidence 1112235555555666666665432 2444455566688999999886 777766 32 45
Q ss_pred eEEEE----eeCCCCCccCHHHHHHHH-hhCCCeec-cCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCC--
Q 010538 399 MVSFN----LKRPDGSWFGYREVEKLA-SLSGIQLR-TGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGK-- 470 (508)
Q Consensus 399 ~v~~~----~~~~~~~~~~~~~l~~~L-~~~gI~v~-~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-- 470 (508)
-+.++ +++.+..++....+...| .+.||.-. -|+...... + .+++
T Consensus 355 av~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd------------------------~---~~~~~~ 407 (467)
T TIGR02617 355 AAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRD------------------------P---KTGKQL 407 (467)
T ss_pred EEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccC------------------------C---CCCccC
Confidence 55554 355666666555555544 67788732 232211110 0 0011
Q ss_pred C--CceEEEecC-CCCCHHHHHHHHHhhhhhhhh
Q 010538 471 P--TGAIRVSFG-YMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 471 ~--~~~iRis~~-~~~t~eev~~l~~~~~~~~~~ 501 (508)
. -..+|+++. ---|.+.+|.+++.+..+.+.
T Consensus 408 ~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 408 PCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1 257999977 334889999999998877643
No 345
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.37 E-value=3.6e-10 Score=118.94 Aligned_cols=348 Identities=14% Similarity=0.074 Sum_probs=196.4
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. |--+|.+++++.++.. ... .... ......++-+++.+.+....+ .+.|++++
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~~---~~~~-----~~~~~~~la~~L~~~~~~~~~--~v~f~~SG 119 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE-RGT---SYGL-----TSEQEILFAEELFSYLGLEDH--KIRFVSSG 119 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHH-hCC---CCCC-----CCHHHHHHHHHHHHhCCCCcC--EEEEeCch
Confidence 67889998443 4558888888766542 211 1111 122344455666677654334 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccchHHH-HHHHHhcCCe---EEEEc-cCC-ccCccccccccccccccccchhh
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNSVLGI-REYALSQGAA---AFAID-VEE-AVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~-~~~~~~~G~~---v~~v~-~~~-~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
++|+..++.... ..+...|+.....|-+...+ .......+.. ..... ... ..... ... -.|++.
T Consensus 120 sEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~d~~~ 190 (433)
T PRK00615 120 TEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTL------SLP---YNDFQI 190 (433)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeE------eCC---CCCHHH
Confidence 999988776542 33445666655433222111 1100000100 00000 000 00000 000 013556
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHH----HHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-C--
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLD----LINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-P-- 258 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~----~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-~-- 258 (508)
++ +.+.+. .+++..|++..+....|.+.|.+ +|.++|++ ||+++|+|++|. |.. .
T Consensus 191 l~--~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~------------~g~llI~DEv~t-G~R~G~~ 252 (433)
T PRK00615 191 FQ--TVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR------------TGSLSIMDEVVT-GFRVAQG 252 (433)
T ss_pred HH--HHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH------------cCCEEEEEcccc-cccccHh
Confidence 66 555321 35678999998999999999865 77777776 999999999984 321 0
Q ss_pred --CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC--CChh
Q 010538 259 --PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT--ASFL 334 (508)
Q Consensus 259 --~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~ 334 (508)
........|++++ .|.+|+-.-+|++++++++.+.+.+. + ..+..+| .|..
T Consensus 253 ga~~~~gv~PDi~~~--gK~lggG~p~~av~~~~~i~~~~~~~--~---------------------~~~~~~T~~g~p~ 307 (433)
T PRK00615 253 GAAAIYHVKPDITVY--GKILGGGLPAAAVVAHKSIMDHLAPE--G---------------------TIFQAGTLSGNPL 307 (433)
T ss_pred HHHHhcCCCCCeEEE--cccccCCcceeeeeecHHHHhhhcCC--C---------------------CcccCCCCcccHH
Confidence 0111224788775 59776211168889999887665431 0 0011223 3556
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc--
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF-- 412 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 412 (508)
.+++..++++.+.+ +.+.+++.++.++|.+.|+++....+.+ +.... .+.++.+.+.+.....+
T Consensus 308 ~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r----------~G~~~~i~~~~~~~~~~~~ 373 (433)
T PRK00615 308 AMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR----------YGSMFSFFFNENRPNNLAE 373 (433)
T ss_pred HHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe----------eceEEEEEEeCCCCCChHH
Confidence 67777778888765 3457888888888877776531100011 22222 26677777753211100
Q ss_pred -------CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 413 -------GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 413 -------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
....+.+.|.++||.+.++.. +. ..++.-+|+
T Consensus 374 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--------------------------------------~~---~~ls~~ht~ 412 (433)
T PRK00615 374 AQLSDIEAFQTFYQSAFSKGVYLSPSPF--------------------------------------EA---SFLSSAHSM 412 (433)
T ss_pred HhhCCHHHHHHHHHHHHHCCeeecCccc--------------------------------------cc---cceecCCCH
Confidence 012477788889999866320 11 145555699
Q ss_pred HHHHHHHHhhhhhhhhhhh
Q 010538 486 EDAKVNRCSSFDFVNFSQF 504 (508)
Q Consensus 486 eev~~l~~~~~~~~~~~~~ 504 (508)
+|||++++++.++++-+-.
T Consensus 413 ~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 413 ENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999998876543
No 346
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.37 E-value=1.4e-10 Score=121.78 Aligned_cols=346 Identities=11% Similarity=0.084 Sum_probs=196.0
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.++.. ... ....... ......++.+++++++....+ .+.|++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~-~~~-~~~~~~~----~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 109 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQID-TMS-HVMFGGL----THEPAIKLTRKLLNLTDNGLD--HVFYSDSG 109 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHH-hCC-CcccCCc----CCHHHHHHHHHHHhhCCCCcC--EEEEeCCc
Confidence 7889999743 35557888888766543 211 1111000 122344556667777654445 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEeccc-ccchHHHHHHHHh-------cC---CeEEEEccCCccCccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTMEN-HNSVLGIREYALS-------QG---AAAFAIDVEEAVDNDGLSESLV 174 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~~-h~s~~~~~~~~~~-------~G---~~v~~v~~~~~~~~~~l~~~~~ 174 (508)
++|+..++.... . ....+|+..... |............ .+ ..+..+|.... .....
T Consensus 110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~----- 183 (422)
T PRK05630 110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV-RGSSP----- 183 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc-cCCCh-----
Confidence 999987765431 1 123456665543 3333322211100 00 11222332210 00000
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC-CCCCccccCH----HHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE-CNFSGSRFNL----DLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~i----~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
+......+.++ +.+ .+++..|++.-. ....|.+.|- +++.++|+ ++|+++|+|
T Consensus 184 --~~~~~~~~~~~--~~~------~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~------------~~g~llI~D 241 (422)
T PRK05630 184 --QEISEYLRSLE--LLI------DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCD------------KHDILLIAD 241 (422)
T ss_pred --HHHHHHHHHHH--HHH------hhceEEEEEechhcCcCCcccCCHHHHHHHHHHHH------------HcCCEEEEe
Confidence 00000123344 222 246788888774 7777887663 34445555 599999999
Q ss_pred cccc-CCCCC----CCCCCCCCcEEEEeccccccC--CCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 250 AAKG-CVTQP----PDLSKYPVDFVVMSFYKIFGY--PTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 250 ~a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~--P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
+++. +|..- .+......|+++++ |.+++ ++ +|+++++++..+.+.... +.+. +
T Consensus 242 Ev~tG~GrtG~~~a~~~~gv~PDi~t~g--K~l~gG~~p-~~av~~~~~i~~~~~~~~-~~~~---------~------- 301 (422)
T PRK05630 242 EIATGFGRTGELFATLAAGVTPDIMCVG--KALTGGFMS-FAATLCTDKVAQLISTPN-GGGA---------L------- 301 (422)
T ss_pred cceeCCCcCchhhHHHhcCCCCCeeeee--chhhcCccc-cceeeccHHHHHHHhccC-CCCc---------c-------
Confidence 9985 23211 11122347888665 97743 33 688888988876553210 0000 0
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 323 EELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 323 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
. .......|....++..++++.+.+. ...+++.++.++|++.|+++.. .+.+ .+-. -++.++.+
T Consensus 302 ~-h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~---~~~v---~~vR------g~Gl~~~i 365 (422)
T PRK05630 302 M-HGPTFMANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAH---LPGV---ADVR------VLGAIGVV 365 (422)
T ss_pred c-cCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhc---CCCe---eeee------ccccEEEE
Confidence 0 0001124556677777788888664 4567888889999888875420 1122 1111 13788888
Q ss_pred EeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCC
Q 010538 403 NLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYM 482 (508)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 482 (508)
.+.+.. ....+.+.+.++|+.+.+. .+.+|+.+.+-
T Consensus 366 e~~~~~----~~~~~~~~~~~~Gl~~~~~----------------------------------------g~~l~~~PpL~ 401 (422)
T PRK05630 366 EMEQPV----DMEEATQAAVDHGVWLRPF----------------------------------------GRLVYVMPPYI 401 (422)
T ss_pred EECCcc----cHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEECCcc
Confidence 885431 1235778888999998641 35799999999
Q ss_pred CCHHHHHHHHHhhhhhhh
Q 010538 483 STFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 483 ~t~eev~~l~~~~~~~~~ 500 (508)
.|++|++++++.+.+.++
T Consensus 402 it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 402 TTSEQIAQICAALAAAVK 419 (422)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999988765
No 347
>PRK07036 hypothetical protein; Provisional
Probab=99.36 E-value=1.3e-09 Score=115.96 Aligned_cols=361 Identities=13% Similarity=0.108 Sum_probs=200.8
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+. +--+|.+.+++.++...-.+..+.... ......++-+++++++....+ .+.|++|+
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~sG 121 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDM-----TNAPAAELAAKLAELAPGDLN--HVFLTTGG 121 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccccc-----CCHHHHHHHHHHHHhCCCCcC--EEEEeCCc
Confidence 78889997543 555888888876654321111111000 122344555666676654445 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEeccc-ccchHHHHHHHHhc------C---CeEEEEccCCccCc-cccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTMEN-HNSVLGIREYALSQ------G---AAAFAIDVEEAVDN-DGLSESLV 174 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~~-h~s~~~~~~~~~~~------G---~~v~~v~~~~~~~~-~~l~~~~~ 174 (508)
|+|+..++.... . .+..+|+..... |............. + ..+..+|....... ... .
T Consensus 122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~ 197 (466)
T PRK07036 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGM----S 197 (466)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCC----C
Confidence 999988776431 1 113566665433 32222221110000 0 11222322110000 000 0
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEec
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDA 250 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~ 250 (508)
........++.++ +.+.+ ...+++..|++..+....|.+.| ++.+.++|++ +|+++|+|+
T Consensus 198 ~~~~~~~~~~~~~--~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~------------~g~llI~DE 261 (466)
T PRK07036 198 EAAFCDFLVDEFE--DKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRR------------YDILYISDE 261 (466)
T ss_pred hHHHHHHHHHHHH--HHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHH------------cCCEEEEee
Confidence 0000000122333 22211 12357889999989888899988 6677777776 999999999
Q ss_pred ccc-CCCCC--CCCC---CCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 251 AKG-CVTQP--PDLS---KYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 251 a~~-~g~~~--~d~~---~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
+++ +|..- .-.. ....|+++++ |.+++- .-+|.+++++++.+.+.+....+.
T Consensus 262 V~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~------------------- 320 (466)
T PRK07036 262 VVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTSGYQPLGAVIISERLLDVISGPNAKGN------------------- 320 (466)
T ss_pred chhCCCcCchhhhhhhhcCCCCCEEEEc--cccccCccccEEEEEcHHHHHHHhcccCcCc-------------------
Confidence 985 44321 1111 2247898886 976631 017999999988765543100000
Q ss_pred ccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
.....+| -|...+++..++++.+.+ +++.++..++.++|++.|+++.. .+. +..-. -.+.++.
T Consensus 321 ~~~~~~T~~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~---~~~---v~~vr------G~Gl~~~ 385 (466)
T PRK07036 321 VFTHGFTYSGHPVACAAALKNIEIMER---EGLCEHVREVGPYFEERLASLRE---LPL---VGDVR------GDHLMAC 385 (466)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhcc---CCC---EEEEE------eeceEEE
Confidence 0001112 345556666777887765 35778888999999998876520 111 11111 1267777
Q ss_pred EEeeCCCC-C---ccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 402 FNLKRPDG-S---WFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 402 ~~~~~~~~-~---~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
+.+...+. . ..+ ...+.+.+.++||.+.+. .+.
T Consensus 386 ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------------------------------~~~ 425 (466)
T PRK07036 386 VECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL----------------------------------------EHL 425 (466)
T ss_pred EEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec----------------------------------------CCE
Confidence 77743211 0 001 134667778899998641 256
Q ss_pred EEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+|+++.+-.|++||+++++.+.+.++-+
T Consensus 426 ~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 426 CVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred EEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998877554
No 348
>PRK07480 putative aminotransferase; Validated
Probab=99.36 E-value=8.5e-10 Score=117.02 Aligned_cols=354 Identities=13% Similarity=0.074 Sum_probs=196.7
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhcccc-CCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVY-GNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g 111 (508)
++.-|+|..+. +.-+|.+++++.+++. ... ......+ ......++.+++++++....+ .+.|+++
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~S 119 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMR-ELPYYNTFFKT-----THPPAIELAAKLAEVAPPGFN--HVFFTNS 119 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHH-hcCCccccccc-----CCHHHHHHHHHHHHhCCCCcC--EEEEeCC
Confidence 67889998543 5557888888766543 211 1111011 123345566777777754445 7999999
Q ss_pred hHHHHHHHHhhcCC-------CCCCeEEEecc-cccchHHHHHHH------HhcCC---eEEEEccCCccC--ccccccc
Q 010538 112 ATAALKLVGEAFPW-------SHQSSYMYTME-NHNSVLGIREYA------LSQGA---AAFAIDVEEAVD--NDGLSES 172 (508)
Q Consensus 112 ~t~al~~~~~~l~~-------~~g~~vl~~~~-~h~s~~~~~~~~------~~~G~---~v~~v~~~~~~~--~~~l~~~ 172 (508)
+++|+..++..... ....+||.... -|.......... +..+. .+..++...... .+..
T Consensus 120 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--- 196 (456)
T PRK07480 120 GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMT--- 196 (456)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCC---
Confidence 99999887764321 12345666543 343333222110 00010 111222110000 0000
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEE
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLI 248 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~viv 248 (508)
....-...++.++ +.+.+ ...+++..|++..+....|.+.| ++.+.++|++ +|+++|+
T Consensus 197 --~~~~~~~~~~~l~--~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~------------~g~llI~ 258 (456)
T PRK07480 197 --PEEFGLAAARQLE--AKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRK------------YDILLVA 258 (456)
T ss_pred --hHHHHHHHHHHHH--HHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH------------cCCEEEE
Confidence 0000000023443 22211 11356888899888888899888 5566666665 9999999
Q ss_pred ecccc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhc--cc-cccCceEEecccchhhhhhc
Q 010538 249 DAAKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLK--NT-YFSGGTVAASIADIDFVKRR 319 (508)
Q Consensus 249 D~a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~--~~-~~g~~~~~~~~~~~~~~~~~ 319 (508)
|+++. +|..- .+......|+++++ |.+++= .-+|.++++++..+.+. +. +..+.
T Consensus 259 DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~--------------- 321 (456)
T PRK07480 259 DEVICGFGRTGEWFGSQHFGIKPDLMTIA--KGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGF--------------- 321 (456)
T ss_pred echhhCCCcCcchhhhhhcCCCCCeeeee--hhhccCCccceEEEEcHHHHHHHhcCCCCcccCC---------------
Confidence 99985 44321 11122247888776 966631 01788899988866542 11 00000
Q ss_pred cCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHH-HHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcccCCCC
Q 010538 320 QGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHI-ASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSYHDTG 397 (508)
Q Consensus 320 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~-~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ 397 (508)
..+-|....++..++++.+.+. .+.++. .++.++|.+.|+++.. .+.+ .+.+ .+
T Consensus 322 --------T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~~g~~l~~~l~~l~~---~~~i~~vrG----------~G 377 (456)
T PRK07480 322 --------TYSGHPVAAAVALANLRILRDE---GIVERVRDDTGPYLQKRLRELAD---HPLVGEVRG----------VG 377 (456)
T ss_pred --------CCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhhc---CCCeeeEEe----------ec
Confidence 1123455666777788887664 455677 4777888777766420 1111 1111 26
Q ss_pred ceEEEEeeCCCC--Ccc-C----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCC
Q 010538 398 SMVSFNLKRPDG--SWF-G----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGK 470 (508)
Q Consensus 398 ~~v~~~~~~~~~--~~~-~----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 470 (508)
.++.+.+..... ..+ + ...+.+.+.++||.+.+.
T Consensus 378 lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~--------------------------------------- 418 (456)
T PRK07480 378 LVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV--------------------------------------- 418 (456)
T ss_pred ceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec---------------------------------------
Confidence 677777742211 101 0 134566777899998541
Q ss_pred CCceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 471 PTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 471 ~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
.+.+|+++.+-.|++||+++++.+.+.++-+
T Consensus 419 -~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 419 -GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3579999999999999999999999887655
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=7.9e-10 Score=117.34 Aligned_cols=356 Identities=12% Similarity=0.072 Sum_probs=199.6
Q ss_pred CCCeeeeCCC-----CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChH
Q 010538 39 NGTVYLDHAG-----ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGAT 113 (508)
Q Consensus 39 ~~~iyld~~~-----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t 113 (508)
++.-|+|..+ .+--+|.+++++.+++. ... .....+ ..+...++.+++++++....+ .+.|++|++
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~-~~~-~~~~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~sGs 140 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMA-KLP-FSPRRF-----TNETAIECAEKLTEIAGGELN--RVLFAPGGT 140 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHH-hCC-CccCcc-----CCHHHHHHHHHHHHhCCCCCC--EEEECCCcH
Confidence 6788999764 34458888888766543 221 111111 123455667778888764445 799999999
Q ss_pred HHHHHHHhhcC-CCCCCeEEEec-ccccchHHHHHHHHh------cC---CeEEEEccCCccC--ccccccccccccccc
Q 010538 114 AALKLVGEAFP-WSHQSSYMYTM-ENHNSVLGIREYALS------QG---AAAFAIDVEEAVD--NDGLSESLVTSTKIS 180 (508)
Q Consensus 114 ~al~~~~~~l~-~~~g~~vl~~~-~~h~s~~~~~~~~~~------~G---~~v~~v~~~~~~~--~~~l~~~~~~~~~~~ 180 (508)
+|+..++.... ..+...|++.. .-|............ .+ ..+..+|...... ..+. ...-.
T Consensus 141 eAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 214 (459)
T PRK06082 141 SAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA------DGSDV 214 (459)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh------hHHHH
Confidence 99988776432 23345555553 344433333222100 00 1122233211000 0000 00000
Q ss_pred cchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC---HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CC
Q 010538 181 LLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN---LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VT 256 (508)
Q Consensus 181 ~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~---i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~ 256 (508)
..++.++ +.+++ .+++..|++..+.+..+.+.| ++++.++|++ +|+++|+|++++. |.
T Consensus 215 ~~~~~l~--~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~------------~g~llI~DEV~tG~GR 276 (459)
T PRK06082 215 HYADYLE--YVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDK------------HNVLLIIDEIPNGMGR 276 (459)
T ss_pred HHHHHHH--HHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEechhhCCCc
Confidence 0134455 44432 236788888878776433455 5666666666 9999999999873 22
Q ss_pred CC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 257 QP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 257 ~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
.- .+......|++++ .|.+++- .-+|.+++++++........ . ......
T Consensus 277 tG~~fa~e~~gv~PDiv~~--gKgl~gG~~P~~av~~~~~i~~~~~~~~----------------------~--~~T~~g 330 (459)
T PRK06082 277 TGEWFTHQAYGIEPDILCI--GKGLGGGLVPIAAMITKDKYNTAAQISL----------------------G--HYTHEK 330 (459)
T ss_pred cchhhHhHhhCCCCCEEEe--cccccCCCCcceEEEEcHHHHhhccCCC----------------------C--CCCCCc
Confidence 11 0111224798885 5977631 01688888887643221000 0 001123
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC-C
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG-S 410 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 410 (508)
|..+.++..++++.+.+. .+.++..++.++|.+.|+++.. ...++..-. -.+.++.+.+..... .
T Consensus 331 npl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vr------G~Gl~~~ve~~~~~~~~ 396 (459)
T PRK06082 331 SPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKA-----KYPLIGDVR------GIGLLWGVELVTDRHTK 396 (459)
T ss_pred CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHh-----hCCCeeeee------eccceeEEEEccCcccc
Confidence 455566667778877653 4678888999999999877521 111222211 126777777753111 1
Q ss_pred ccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHH
Q 010538 411 WFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFED 487 (508)
Q Consensus 411 ~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ee 487 (508)
..+ ...+...+.++|+.+.+. ..+.+|+++.+-.|++|
T Consensus 397 ~~~~~~~~~~~~~~~~~Gvl~~~~---------------------------------------~~~~i~~~Ppl~it~~e 437 (459)
T PRK06082 397 ERAYDEAEAVLYRCLNNGLSFKVS---------------------------------------QGNVIQLSPPLIITREE 437 (459)
T ss_pred CccHHHHHHHHHHHHhCCCEEEec---------------------------------------CCCEEEEeCCCccCHHH
Confidence 111 234566677899988652 14689999999999999
Q ss_pred HHHHHHhhhhhhhh-hhhcc
Q 010538 488 AKVNRCSSFDFVNF-SQFLN 506 (508)
Q Consensus 488 v~~l~~~~~~~~~~-~~~~~ 506 (508)
|+++++++.+.+.- .|-+|
T Consensus 438 id~~~~~l~~~l~~~~~~~~ 457 (459)
T PRK06082 438 LTQALAILEEAIAKICQDFN 457 (459)
T ss_pred HHHHHHHHHHHHHHHhhhcc
Confidence 99999999987643 44444
No 350
>PRK05965 hypothetical protein; Provisional
Probab=99.35 E-value=1e-09 Score=116.65 Aligned_cols=364 Identities=13% Similarity=0.027 Sum_probs=201.5
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+. +--+|.+++++.++.. .... ....+.. ......++-+++++++..+.+ .+.|++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~-~~~~-~~~~~~~---~~~~~~~lae~L~~~~p~~~~--~v~f~~sG 116 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMR-ELPY-ATGYFHF---GSEPAIRLAAKLAERAPGSLN--HVYFTLGG 116 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHH-hcCC-ccccccc---CCHHHHHHHHHHHhhCCCCcC--EEEEeCCh
Confidence 78899998543 4458889888766543 2110 0000000 122234556667777654445 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEeccc-ccchHHHHHHHH------hcC---CeEEEEccCCccC--c-cccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTMEN-HNSVLGIREYAL------SQG---AAAFAIDVEEAVD--N-DGLSES 172 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~~-h~s~~~~~~~~~------~~G---~~v~~v~~~~~~~--~-~~l~~~ 172 (508)
++|+..++.... . ....+||..... |........... ..| ..+..+|...... . ++.
T Consensus 117 SEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (459)
T PRK05965 117 SDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP--- 193 (459)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh---
Confidence 999988776532 1 123456666544 433322222110 011 0112222210000 0 000
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccc
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAK 252 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~ 252 (508)
.....-.++.++ +.+.+. ..+++..|++..++...|.+.|.+..-+-+++ +|++||+++|+|+++
T Consensus 194 ---~~~~~~~~~~l~--~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~--------lc~~~gillI~DEV~ 258 (459)
T PRK05965 194 ---QAIIAASVAALR--AKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE--------ACRELGILFVADEVI 258 (459)
T ss_pred ---HHHHHHHHHHHH--HHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHH--------HHHHcCCEEEEechh
Confidence 000000123455 444211 12567888888888888988774433333333 444599999999998
Q ss_pred c-CCCCC--CCC--CCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccc
Q 010538 253 G-CVTQP--PDL--SKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELF 326 (508)
Q Consensus 253 ~-~g~~~--~d~--~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 326 (508)
. +|..- .-. .....|+++++ |.+++- .-+|.+++++++.+.+.+.....+ ...
T Consensus 259 tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~-------------------~~~ 317 (459)
T PRK05965 259 TGFGRTGPLFACEAEGVVPDLMTVA--KGLTSGYVPMGAVLMSDHVYQGIADGAGAAA-------------------PVG 317 (459)
T ss_pred ccCccCchhhhHhhcCCCCCeEEec--hhhccCCcceeEEEEcHHHHHHHhccccccc-------------------ccc
Confidence 6 33221 111 12247999997 965521 128999999988765532100000 000
Q ss_pred cCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEe
Q 010538 327 EDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNL 404 (508)
Q Consensus 327 ~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (508)
..+| -|..+.++..++++.+.+ +++.++..++.++|.+.|+++.. .+ ++.+-. -++.++.+.+
T Consensus 318 h~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~l~~l~~---~~---~v~~vr------G~Gl~~gie~ 382 (459)
T PRK05965 318 HGYTYSAHPVSAAVGLEVLRLYHE---GGLLANGQKAGPRFAAGLDALRA---HP---LVGDVR------GRGLLGALEL 382 (459)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhcc---CC---CEEEEe------ecceEEEEEE
Confidence 1112 344556666667887766 45678888999999999987620 12 122111 1266777776
Q ss_pred eCCCC--Ccc-----CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 405 KRPDG--SWF-----GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 405 ~~~~~--~~~-----~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
..... ..+ -...+.+.+.++|+.+++. ....+|+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------------------------------------g~~~i~~ 423 (459)
T PRK05965 383 VADKATKTPFDAALDPADRIFDRAYANGLVFRAF---------------------------------------GDGVLGF 423 (459)
T ss_pred eccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------------------------------------CCcEEEE
Confidence 42110 000 1234667778899998641 1357999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
.+.+-.|++|++++++.+.+.++.+
T Consensus 424 ~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 424 APALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877643
No 351
>PRK07481 hypothetical protein; Provisional
Probab=99.35 E-value=5.6e-10 Score=118.31 Aligned_cols=361 Identities=14% Similarity=0.111 Sum_probs=199.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC-CCCCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA-SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~~~~~~i~~t~g 111 (508)
++..|+|..+ .+--+|.+.+++.+++..-.+....... ......++.++++++++. ..+ .+.|+++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~~lae~L~~~~~~~~~~--~v~f~~s 112 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGT-----THPRAIELSYELIDMFAPEGMR--RVFFSSG 112 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceeccccc-----CCHHHHHHHHHHHHhcCCCCCC--EEEEcCc
Confidence 7888999743 3455788888876654321110010000 122334456667777642 234 7999999
Q ss_pred hHHHHHHHHhhcCC-------CCCCeEEEecccccc-hHHHHHHHHh------cC---CeEEEEccCCccC--cc--ccc
Q 010538 112 ATAALKLVGEAFPW-------SHQSSYMYTMENHNS-VLGIREYALS------QG---AAAFAIDVEEAVD--ND--GLS 170 (508)
Q Consensus 112 ~t~al~~~~~~l~~-------~~g~~vl~~~~~h~s-~~~~~~~~~~------~G---~~v~~v~~~~~~~--~~--~l~ 170 (508)
+++|+..++..... ....+|+.....|-. .......... .+ ..+..++...... .+ +.+
T Consensus 113 GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 192 (449)
T PRK07481 113 GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE 192 (449)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence 99999887764321 123556666544333 3222211100 00 1122222211000 00 000
Q ss_pred cccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEE
Q 010538 171 ESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMV 246 (508)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~v 246 (508)
+ +... ..+.++ +.+.. ...+++..|++..+....|.+.| ++.+.++|++ +|+++
T Consensus 193 ~---~~~~---~~~~le--~~i~~--~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~------------~g~ll 250 (449)
T PRK07481 193 E---LARI---CARLLE--REIAF--QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDR------------HGILL 250 (449)
T ss_pred H---HHHH---HHHHHH--HHHHh--cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHH------------cCCEE
Confidence 0 0000 012233 22210 11356899999889888898877 5566666665 99999
Q ss_pred EEecccc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhcc
Q 010538 247 LIDAAKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQ 320 (508)
Q Consensus 247 ivD~a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 320 (508)
|.|+++. +|..- .+......|+++.+ |.+++- .-+|.++++++..+.+.+.....
T Consensus 251 I~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~----------------- 311 (449)
T PRK07481 251 IADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVPLGATMVNARIADAFEANADFG----------------- 311 (449)
T ss_pred EEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcCceEEEEcHHHHHHHhccCccc-----------------
Confidence 9999976 33221 11222347999887 966631 01799999988876554321000
Q ss_pred CccccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCc
Q 010538 321 GVEELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGS 398 (508)
Q Consensus 321 ~~~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (508)
......+| -|....++..++++.+.+ +++.++.+++.++|.+.|+++.. ...++..-. -.+.
T Consensus 312 --~~~~h~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vr------G~Gl 375 (449)
T PRK07481 312 --GAIMHGYTYSGHPVACAAALATLDIVVR---EDLPANAAKRGAYLLEGLQPLKE-----RFELVGDVR------GKGL 375 (449)
T ss_pred --cccccCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhh-----cCCCeEEEe------ecce
Confidence 00011223 245556666667777655 46778888899999988877621 111222111 1266
Q ss_pred eEEEEeeCCC--CCccC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCC
Q 010538 399 MVSFNLKRPD--GSWFG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKP 471 (508)
Q Consensus 399 ~v~~~~~~~~--~~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 471 (508)
++.+.+.... ....+ ...+.+.+.++||.+.+.
T Consensus 376 m~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---------------------------------------- 415 (449)
T PRK07481 376 MLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS---------------------------------------- 415 (449)
T ss_pred EEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------------------------------------
Confidence 7777764211 10011 134667777899998652
Q ss_pred CceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 472 TGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 472 ~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
.+.+|+++.+-.|++|||++++.+.+.++.+.
T Consensus 416 g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 416 GTKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 24589999998999999999999998886654
No 352
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.35 E-value=2e-10 Score=121.32 Aligned_cols=349 Identities=13% Similarity=0.071 Sum_probs=190.5
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHH-hhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRD-FTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g 111 (508)
++..|+|..+. +--+|.+++++.++ ...... +... + ......++.+.+.+.+++++..+.+ .+.|++|
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~-~~~~-~-~~~~~~~la~~l~~~l~~~~p~~~~--~v~f~~S 130 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLI-NRPA-L-GNFPSKDWAKILKEGILKVAPKGQD--QVWTGMS 130 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhc-cccc-C-CcHHHHHHHHHHHHhHHhhCCCCcC--EEEEeCC
Confidence 78899998664 55588898888663 222211 1111 1 1111223333333334555543335 7999999
Q ss_pred hHHHHHHHHhhcC-C-----C-------------------C---CCeEEEeccc-ccchHHHHHHHHh-----cC---Ce
Q 010538 112 ATAALKLVGEAFP-W-----S-------------------H---QSSYMYTMEN-HNSVLGIREYALS-----QG---AA 154 (508)
Q Consensus 112 ~t~al~~~~~~l~-~-----~-------------------~---g~~vl~~~~~-h~s~~~~~~~~~~-----~G---~~ 154 (508)
+++|+..++.... . + . ...||..... |............ .+ ..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 9999988766441 0 0 0 1256666544 4334433322110 01 11
Q ss_pred EEEEccCCc-cCccc-cccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHc
Q 010538 155 AFAIDVEEA-VDNDG-LSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKK 228 (508)
Q Consensus 155 v~~v~~~~~-~~~~~-l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~ 228 (508)
+..+|.... ..... .++ ....-..+++.++ +.+++ ..+++..|++..+....|.+.| ++.+.++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~---~~~~~~~~l~~l~--~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~ 282 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKE---NAKEEQRCLEEVE--DLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITK 282 (464)
T ss_pred ceecCCCCccccccccccc---chhHHHHHHHHHH--HHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 112222110 00000 000 0000001344555 44432 2356899999999999999998 777777777
Q ss_pred CCccccccCCCCCCCeEEEEecccc-CCCCC-------CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhcccc
Q 010538 229 NPERILEISPFSKGRWMVLIDAAKG-CVTQP-------PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTY 300 (508)
Q Consensus 229 ~~~~~~~~~~~~~~g~~vivD~a~~-~g~~~-------~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~ 300 (508)
+ +|+++|+|+++. +|..- .++. ...|+++++ |.++ |.|+++.+ +.+....+..
T Consensus 283 ~------------~g~lLI~DEV~tGfGrtG~~fa~e~~gv~-~~PDi~t~g--K~lg---~gG~~~~~-~~~~~~~~~~ 343 (464)
T TIGR00699 283 K------------HNVAFIVDEVQTGVGATGKFWAHEHWNLD-DPPDMVTFS--KKFQ---TAGYFFHD-PAFRPNKPYR 343 (464)
T ss_pred H------------cCCEEEEeeeeeCCCCCcchhHHHhcCCC-CCCCEEEeh--hhhc---cCCccccc-hhccCCCCcc
Confidence 6 999999999985 33211 1222 137887775 9875 22443332 2211001110
Q ss_pred ccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce
Q 010538 301 FSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV 380 (508)
Q Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~ 380 (508)
. ......|....++..++++.+.+ +++.++..++.++|.+.|+++.. .
T Consensus 344 ~------------------------~~T~~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~-----~ 391 (464)
T TIGR00699 344 Q------------------------FNTWMGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQK-----K 391 (464)
T ss_pred c------------------------ccCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH-----h
Confidence 0 01122445556666677887765 35667777888888888876520 1
Q ss_pred EE-EecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCc
Q 010538 381 CT-IYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHV 459 (508)
Q Consensus 381 ~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 459 (508)
.. ++..... .-.+.++.+.+++.. ....+.+.+.++|+.+...
T Consensus 392 ~~~~i~~vRg----~G~Glm~gie~~~~~----~~~~i~~~~~~~Gvl~~~~---------------------------- 435 (464)
T TIGR00699 392 YPEFIQNLRG----KGRGTFIAWDTPDEA----KRDKLLKKARNNGVNIGGC---------------------------- 435 (464)
T ss_pred CCCceeeecc----cCeEEEEEEecCCHH----HHHHHHHHHHHCCcEEecC----------------------------
Confidence 11 1111100 012788888875321 1235778888899998641
Q ss_pred cCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhh
Q 010538 460 CWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDF 498 (508)
Q Consensus 460 ~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~ 498 (508)
..+.|||++.+-.|++||+.+++++.+.
T Consensus 436 -----------g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 436 -----------GVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred -----------CCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 1368999999999999999999998764
No 353
>PRK06917 hypothetical protein; Provisional
Probab=99.34 E-value=1.1e-09 Score=115.97 Aligned_cols=365 Identities=13% Similarity=0.067 Sum_probs=199.6
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+.+++.+++..-.+..+ ..+ ..+...++.+++++++....+ .+.|++++
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~sG 100 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-SQF-----TSEPAEKLAKKLSDLSPGDLN--WSFFVNSG 100 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-ccc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCh
Confidence 7788999743 355588898887665532111101 011 123345566777777754445 79999999
Q ss_pred HHHHHHHHhhcC-------CCCCCeEEEecccccc-hHHHHHHHHhcCC---------eEEEEccCCccC--cccccccc
Q 010538 113 TAALKLVGEAFP-------WSHQSSYMYTMENHNS-VLGIREYALSQGA---------AAFAIDVEEAVD--NDGLSESL 173 (508)
Q Consensus 113 t~al~~~~~~l~-------~~~g~~vl~~~~~h~s-~~~~~~~~~~~G~---------~v~~v~~~~~~~--~~~l~~~~ 173 (508)
|+|+..++.... ..+..+|+.....|-. ...........+. .+..+|...... .+..
T Consensus 101 sEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~---- 176 (447)
T PRK06917 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKV---- 176 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCC----
Confidence 999988776541 1223567666544433 3333321110000 112222110000 0000
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCC-ccccC----HHHHHHHHcCCccccccCCCCCCCeEEEE
Q 010538 174 VTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFS-GSRFN----LDLINIMKKNPERILEISPFSKGRWMVLI 248 (508)
Q Consensus 174 ~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~t-G~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~viv 248 (508)
....-..+++.++ ..+++. ..+++..|++.-+.... |.+.| ++.+.++|+ ++|+++|+
T Consensus 177 -~~~~~~~~~~~le--~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~------------~~g~llI~ 239 (447)
T PRK06917 177 -YPTCQLACATELE--TAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICD------------HYDILFIA 239 (447)
T ss_pred -hHHHHHHHHHHHH--HHHHhc--CCCceEEEEEeccccCcCceecCCHHHHHHHHHHHH------------HcCCEEEE
Confidence 0000001234455 444321 12467888887766543 56666 334555555 49999999
Q ss_pred ecccc-CCCCCC----CCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 249 DAAKG-CVTQPP----DLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 249 D~a~~-~g~~~~----d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
|+++. +|..-. +......|+++++ |.+++=. -+|.+.+++++.+.+.+.. +
T Consensus 240 DEv~tGfGRtG~~~a~~~~gv~PDi~~~g--K~l~~G~~Pi~a~~~~~~i~~~~~~~~---~------------------ 296 (447)
T PRK06917 240 DEVMTGLGRTGAMFAMEHWGVEPDIMTLG--KGLGAGYTPIAATVVSDRVMEPILRGS---R------------------ 296 (447)
T ss_pred echhhCcCcccchhhHHhcCCCCCEEEee--ehhccCCcceEEEEEcHHHHHHHhccC---c------------------
Confidence 99986 222111 1112247888775 9766311 1788888988866543210 0
Q ss_pred cccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceE
Q 010538 323 EELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMV 400 (508)
Q Consensus 323 ~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (508)
..+..+| .|...+++..++++.+.+. ++.++..++.++|.+.|+++.. ...++..-. -.+.++
T Consensus 297 -~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vr------G~Gl~~ 361 (447)
T PRK06917 297 -SIMSGHTLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQ-----QSTIIGDVR------GKGLLI 361 (447)
T ss_pred -ccccccCCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHh-----cCCCEEEEe------ecceEE
Confidence 0011122 3455666777778877653 5678888899999988877621 111121111 126677
Q ss_pred EEEeeCCCC--Ccc-----CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCc
Q 010538 401 SFNLKRPDG--SWF-----GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTG 473 (508)
Q Consensus 401 ~~~~~~~~~--~~~-----~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (508)
.+.+...+. ... -...+.+.+.++||.+.+...... +...+
T Consensus 362 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~--------------------------------g~~~~ 409 (447)
T PRK06917 362 GVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQD--------------------------------GKEGD 409 (447)
T ss_pred EEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccC--------------------------------CCCCC
Confidence 777642110 000 023466777889999875311000 01246
Q ss_pred eEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 474 AIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 474 ~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
.+|+++.+-.|++||+++++++.+.++.+
T Consensus 410 ~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 410 AVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999887653
No 354
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.34 E-value=5.9e-10 Score=117.41 Aligned_cols=346 Identities=11% Similarity=0.083 Sum_probs=193.9
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+. +--+|.+++++.++.. . ......... ......++-+++++++...-+ .+.|++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~-~-~~~~~~~~~----~~~~~~~la~~l~~~~~~~~~--~v~f~~sG 114 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQID-K-MSHVMFGGF----THKPAIELCQKLVKMTPNALD--CVFLADSG 114 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHH-h-cCCcccccc----CCHHHHHHHHHHHhhCCCCCC--EEEEeCCc
Confidence 67789997542 4558888888766442 2 111111101 112234455667777654445 89999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEeccc-ccchHHHHHHHHh--------cC--CeEEEEccCCccCccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTMEN-HNSVLGIREYALS--------QG--AAAFAIDVEEAVDNDGLSESLV 174 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~~-h~s~~~~~~~~~~--------~G--~~v~~v~~~~~~~~~~l~~~~~ 174 (508)
|+|+..++.... . .+...||..... |............ .+ ..+..+|.........
T Consensus 115 seA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~------ 188 (427)
T TIGR00508 115 SVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEE------ 188 (427)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccch------
Confidence 999887766432 1 123456655543 3333322221100 00 0011111100000000
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC-CCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE-CNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
.-..+.++++ +.+.+ ..+++..|++..+ +...|.+.+ +++|.++|++ +|+++|+|
T Consensus 189 ---~~~~~~~~l~--~~l~~---~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~------------~~~llI~D 248 (427)
T TIGR00508 189 ---WNEEAITPLA--KLMEL---HSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQ------------YDILLIAD 248 (427)
T ss_pred ---hHHHHHHHHH--HHHHh---cCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHH------------cCCEEEEe
Confidence 0001344555 44422 1345778888875 555555443 4455555555 99999999
Q ss_pred cccc-CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
++|. +|... .+......|+++. .|.+++- .-++.++.++++.+.+.....+.
T Consensus 249 Ev~tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~-------------------- 306 (427)
T TIGR00508 249 EIATGFGRTGKLFACEHAGVVPDILCV--GKALTGGYMTLSATVTTDKVAQTISSGEAGC-------------------- 306 (427)
T ss_pred ccccCCCcCCccchhhhcCCCCCEEEe--chhhhcCcccceEEEEcHHHHHHHhcCCCCc--------------------
Confidence 9984 22211 1112235788875 6966521 12578888888766554310000
Q ss_pred ccccCC--CCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDG--TASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~g--t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
....+ ..|...+++..++++.+.+. ++.++.+++.++|++.|+++.. .+.+ .... -.+.++.
T Consensus 307 -~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~---~~~i---~~vr------g~G~~~~ 370 (427)
T TIGR00508 307 -FMHGPTFMGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRK---NPVV---KDVR------VLGAIGV 370 (427)
T ss_pred -cccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhc---CCCE---EeEe------ccccEEE
Confidence 00011 13456677777788887653 4568889999999999987621 1111 1111 1277888
Q ss_pred EEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCC
Q 010538 402 FNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGY 481 (508)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 481 (508)
+.+.+.. ....+.+.|.++||.+.+. ...+|+++..
T Consensus 371 i~~~~~~----~~~~~~~~l~~~Gv~~~~~----------------------------------------~~~l~~~ppl 406 (427)
T TIGR00508 371 VEMYKPV----NVEELQKKFVEQGVWIRPF----------------------------------------GKLIYVMPPY 406 (427)
T ss_pred EEECCcc----CHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEECCC
Confidence 8875421 2345888888999998541 2469999999
Q ss_pred CCCHHHHHHHHHhhhhhhh
Q 010538 482 MSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 482 ~~t~eev~~l~~~~~~~~~ 500 (508)
-+|.+||+++++++.+.+.
T Consensus 407 ~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 407 IITTEQLQKLTAALIEALH 425 (427)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 9999999999999988764
No 355
>PRK06149 hypothetical protein; Provisional
Probab=99.34 E-value=8.8e-10 Score=127.05 Aligned_cols=355 Identities=14% Similarity=0.086 Sum_probs=203.2
Q ss_pred CCCeeeeCCC----CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHAG----ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~~----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~ 114 (508)
++.-|+|..+ .|--+|.+++++.+++. ... ..+.+ ......+..+++++++....+ .+.|++++++
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~-~l~--~~~~~-----~~~~~~elae~L~~~~p~~~~--~v~f~~SGsE 652 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWS-LLN--TNSRF-----HYAAVAEFSERLAALAPDGLD--TVFLVNSGSE 652 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHH-hcc--ccccc-----cCHHHHHHHHHHHHhCCCCcC--EEEEeCCchH
Confidence 5678888754 33347888888866543 221 11111 123445566778887744345 7999999999
Q ss_pred HHHHHHhhcC-CCCCCeEEEec-ccccchHHHHHHHHh----cC------CeEEEEccCCcc--Cccccccccccccccc
Q 010538 115 ALKLVGEAFP-WSHQSSYMYTM-ENHNSVLGIREYALS----QG------AAAFAIDVEEAV--DNDGLSESLVTSTKIS 180 (508)
Q Consensus 115 al~~~~~~l~-~~~g~~vl~~~-~~h~s~~~~~~~~~~----~G------~~v~~v~~~~~~--~~~~l~~~~~~~~~~~ 180 (508)
|+..++.... ..+...||+.. .-|............ .+ .-+..++..... ...+.+ ... .
T Consensus 653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~---~~~-~-- 726 (972)
T PRK06149 653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGAD---SAA-D-- 726 (972)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcc---cHH-H--
Confidence 9998877321 23344555554 445433332221100 00 012223221110 010000 000 0
Q ss_pred cchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccc-cCC
Q 010538 181 LLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAK-GCV 255 (508)
Q Consensus 181 ~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~-~~g 255 (508)
..+.++ +.+++.....+++..|++..+....|.+.| ++++.++|++ +|+++|+|++| ++|
T Consensus 727 -~~~~~~--~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~------------~g~llI~DEV~tGfG 791 (972)
T PRK06149 727 -YVRDVV--AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRA------------RGGVCIADEVQVGYG 791 (972)
T ss_pred -HHHHHH--HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHH------------cCCEEEEEeehhcCC
Confidence 011211 111100112356788999888888899999 7788888887 99999999999 454
Q ss_pred CCCC---CC--CCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC
Q 010538 256 TQPP---DL--SKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT 330 (508)
Q Consensus 256 ~~~~---d~--~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 330 (508)
..-- -+ .....|+++++ |.+|+-..+|++++++++.+.+.+. +. .+...+
T Consensus 792 RtG~~~~a~e~~gv~PDivt~g--K~lg~G~Pl~av~~~~~i~~~~~~~--~~---------------------~~sT~~ 846 (972)
T PRK06149 792 RLGHYFWGFEQQGVVPDIITMA--KGMGNGHPLGAVITRREIAEALEAE--GY---------------------FFSSTG 846 (972)
T ss_pred ccCccchhhhhcCCCCCEEEec--ccccCCeeeEEEEEcHHHHhhhccC--Cc---------------------ccCCCC
Confidence 4321 11 12247998665 9766312279999999887655431 00 000112
Q ss_pred CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC-CC
Q 010538 331 ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP-DG 409 (508)
Q Consensus 331 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 409 (508)
-|..+.++..++++.+.+ +++.++.+++.++|++.|+++.. ...+++.-.. .+.++.+.+... ..
T Consensus 847 gnP~~~aaala~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~-----~~~~i~~vrG------~Gl~~gvel~~~~~~ 912 (972)
T PRK06149 847 GSPVSCRIGMAVLDVLRE---EKLQENARRVGDHLKARLEALAD-----RHPLIGAVHG------MGLYLGVELVRDRQT 912 (972)
T ss_pred CCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH-----hCCCeEEEee------cceEEEEEEecCccc
Confidence 345556666677887765 35678888888999888877521 1111222111 267777776421 10
Q ss_pred Ccc---CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHH
Q 010538 410 SWF---GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFE 486 (508)
Q Consensus 410 ~~~---~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~e 486 (508)
..- ....+.+.+.++||.+.+.. ...+.+||.+.+-.|++
T Consensus 913 ~~~~~~~~~~i~~~l~~~Gvl~~~~g-------------------------------------~~~~vl~~~Ppl~it~~ 955 (972)
T PRK06149 913 LEPATEETAAICDRLLELGVIMQPTG-------------------------------------DHLNILKIKPPLCLDRE 955 (972)
T ss_pred CCCChHHHHHHHHHHHhCCeEEeecC-------------------------------------CCCCEEEEECCCcCCHH
Confidence 000 12357778888999987521 01478999999999999
Q ss_pred HHHHHHHhhhhhhh
Q 010538 487 DAKVNRCSSFDFVN 500 (508)
Q Consensus 487 ev~~l~~~~~~~~~ 500 (508)
|++.+++.+.+.+.
T Consensus 956 ~id~~~~~l~~~l~ 969 (972)
T PRK06149 956 SADFFVDMLDRVLT 969 (972)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988765
No 356
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=5.6e-10 Score=118.61 Aligned_cols=364 Identities=12% Similarity=0.053 Sum_probs=200.6
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.+++. .........+ ......++-+++++++....+ .+.|++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-~l~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~SG 125 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLN-KIAHSTLLGL-----ANVPSILLAEKLIEVVPEGLK--KVFYSDSG 125 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHH-hCCCcccccc-----CCHHHHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 7888999744 25668889888766543 2211111011 122344566677777754445 79999999
Q ss_pred HHHHHHHHhhcCC-------CCCCeEEEeccc-ccchHHHHHHHHh------cC---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFPW-------SHQSSYMYTMEN-HNSVLGIREYALS------QG---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~~-------~~g~~vl~~~~~-h~s~~~~~~~~~~------~G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++..... .+..+||..... |............ ++ ..+..+|........ ... ..
T Consensus 126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~-~~~--~~ 202 (460)
T PRK06916 126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSP-YGN--DK 202 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccc-cCC--Ch
Confidence 9999887764321 223566666543 3333322221100 00 112223321100000 000 00
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeC-CCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecccc-
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPS-ECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKG- 253 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~-~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~- 253 (508)
......+++.++ +.+++ ..+++..|++.- +....|.+.|-++..+.+++ +|+++|+++|+|+++.
T Consensus 203 ~~~~~~~~~~l~--~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~--------lc~~~g~llI~DEV~TG 269 (460)
T PRK06916 203 AEIVKKHLEELE--ELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRN--------LCTKYNVLFITDEVATG 269 (460)
T ss_pred HHHHHHHHHHHH--HHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHH--------HHHHcCCEEEeechhhC
Confidence 000011344455 44431 235678888877 57777887753322222222 4445999999999976
Q ss_pred CCCCC----CCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccC
Q 010538 254 CVTQP----PDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFED 328 (508)
Q Consensus 254 ~g~~~----~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (508)
+|..- .+......|+++++ |.+++- ..+|.+++++++.+.+.+..... ...+..
T Consensus 270 ~GRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~ei~~~~~~~~~~~-------------------~~~~~~ 328 (460)
T PRK06916 270 FGRTGKMFACEHENVTPDIMTAG--KGLTGGYLPIAITVTTDEIYNAFYGDYEEQ-------------------KTFFHG 328 (460)
T ss_pred CCcCchhhHHHhcCCCCCeeeee--hhhhcCccccceeeecHHHHHHhhcccccc-------------------CccccC
Confidence 33211 11112247998876 955521 12799999998866543211000 000111
Q ss_pred CC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeC
Q 010538 329 GT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKR 406 (508)
Q Consensus 329 gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 406 (508)
+| -|...+++..++++.+.+. .+.+++.++.++|.+.|+++. ...++++-. -.+.++.+.+..
T Consensus 329 ~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~------~~~~v~~vr------G~Glm~giel~~ 393 (460)
T PRK06916 329 HSYTGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLF------ALKHVGDIR------QLGLMVGIELVK 393 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhh------cCCCeEEee------cCCceeeEEeec
Confidence 22 2555566667778877653 467888999999999998762 111121111 126667776643
Q ss_pred CCC--Ccc----C-HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEec
Q 010538 407 PDG--SWF----G-YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSF 479 (508)
Q Consensus 407 ~~~--~~~----~-~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 479 (508)
... ..+ . ...+.+.+.++||.+.+. .+.+|+.+
T Consensus 394 ~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------------------g~~l~~~P 433 (460)
T PRK06916 394 NKETKEPFEWTERVGVQVCKRSRELGMLTRPL----------------------------------------GNTIVFMP 433 (460)
T ss_pred ccccccCCCchhhHHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEeC
Confidence 211 000 0 134777788899998651 35799999
Q ss_pred CCCCCHHHHHHHHHhhhhhhhhh
Q 010538 480 GYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 480 ~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
.+-.|++||+++++++.+.++-+
T Consensus 434 pl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 434 PLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred CcccCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999887654
No 357
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.32 E-value=5.4e-10 Score=113.89 Aligned_cols=355 Identities=14% Similarity=0.050 Sum_probs=196.1
Q ss_pred CCCeeeeCCC-CCC-----CCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG-ATL-----YSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~-~~~-----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|.|+.. .++ -+|.+.+++.+..... ...+..+. ..-.+-+.+.+.+..- + .|-|++++
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G--------~~fg~Pte-~Ei~~Aell~~~~p~~-e--~vrfvnSG 118 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG--------LSFGAPTE-LEVELAELLIERVPSI-E--KVRFVNSG 118 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhc--------CCCCCCCH-HHHHHHHHHHHhcCcc-c--EEEEecch
Confidence 7788888854 332 3788888876654321 11111122 2233446677777653 3 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccc-hHHHHHHHHhcCCeEEEEccCCccCcccc-ccccccccccccchhhhhcC
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNS-VLGIREYALSQGAAAFAIDVEEAVDNDGL-SESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s-~~~~~~~~~~~G~~v~~v~~~~~~~~~~l-~~~~~~~~~~~~d~~~l~~~ 189 (508)
|+|.+.+++... ..+.++|+..+..|-. ...++--+. .|..-.-.|... +-..++ +..+.++ +. |++.++
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~ag-sg~~t~g~p~s~-Gvp~~~a~~ti~~~-yN--D~~al~-- 191 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAG-SGAATLGSPSSP-GVPADVAKHTLVLP-YN--DLEALE-- 191 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcC-cCcccCCCCCCC-CCChhhhccEEEec-CC--CHHHHH--
Confidence 999988765542 2445677666554433 333322211 111100001100 000000 0000000 00 466777
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC----CCCCCC
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP----DLSKYP 265 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~----d~~~~~ 265 (508)
+++++. .++...|.+.-+....|.+.|.++..+-.++ +|+++|+++|.|++...-..++ +.-...
T Consensus 192 ~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~--------lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~ 260 (432)
T COG0001 192 EAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRE--------LTEEHGALLIFDEVITGFRVALGGAQGYYGVE 260 (432)
T ss_pred HHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHH--------HHHHcCcEEEEecchhhcccCCcccccccCcC
Confidence 666432 5678999998888889999996644444444 4445999999998865311111 111223
Q ss_pred CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC--ChhHHHHHHHHH
Q 010538 266 VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA--SFLSIASIRHGF 343 (508)
Q Consensus 266 ~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~~l~~al 343 (508)
.|+.+.+ |..||---+|.+-.+++..+.+.|. ..-+..||. |..++++-.+++
T Consensus 261 PDlttlG--KiIGGGlP~ga~gGr~eiM~~~~p~-----------------------g~vyqaGT~sgnplamaAG~atl 315 (432)
T COG0001 261 PDLTTLG--KIIGGGLPIGAFGGRAEIMEQLAPL-----------------------GPVYQAGTLSGNPLAMAAGLATL 315 (432)
T ss_pred cchhhhh--hhhcCCcceeeeccHHHHHhhhCCC-----------------------CCccccCCCCCcHHHHHHHHHHH
Confidence 6777766 9666311289999999998876665 122344554 445566666777
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCcc---------CH
Q 010538 344 NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWF---------GY 414 (508)
Q Consensus 344 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---------~~ 414 (508)
+.+.+. +...+++.++.++|++.|++.-... ++.+.... .+.++.+.+.+.+.... ..
T Consensus 316 ~~l~~~--~~~y~~l~~~~~~L~~gl~~~~~~~---g~~~~v~~--------~gsm~~i~F~~~~~~n~~da~~sd~~~~ 382 (432)
T COG0001 316 EELMTE--EGVYERLDALGERLAEGLRAAAERH---GIPLTVNR--------VGSMFGIFFTEEGVRNYADAKRSDVERF 382 (432)
T ss_pred HHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHh---CCCeEEee--------ecceEEEEecCCCCCCHHHHHhhchHHH
Confidence 776552 2356777777777777776532111 22222221 25666666544211100 01
Q ss_pred HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHh
Q 010538 415 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCS 494 (508)
Q Consensus 415 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~ 494 (508)
.++.+.|.++||.+.++.+ ...=+| .-+|++||++.+++
T Consensus 383 ~~~~~~~l~~GV~l~ps~~---------------------------------------ea~flS--~ahte~di~~~~~a 421 (432)
T COG0001 383 AKFFHHLLNRGVYLAPSQF---------------------------------------EAGFLS--TAHTEEDIDRTLEA 421 (432)
T ss_pred HHHHHHHHhCCcccCCccc---------------------------------------cceeee--cccCHHHHHHHHHH
Confidence 2344566778998876421 122333 34699999999999
Q ss_pred hhhhhhhh
Q 010538 495 SFDFVNFS 502 (508)
Q Consensus 495 ~~~~~~~~ 502 (508)
+.+.++-+
T Consensus 422 ~~~~~~~~ 429 (432)
T COG0001 422 ADEAFKEL 429 (432)
T ss_pred HHHHHHHh
Confidence 88766543
No 358
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.32 E-value=8.4e-11 Score=118.46 Aligned_cols=259 Identities=16% Similarity=0.159 Sum_probs=158.9
Q ss_pred CCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 39 NGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 39 ~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
-+.+-.-+.+-+..++.+++++.... .. +-+-......+ ........+.+..+...++. .++++++.+.|+.+
T Consensus 26 ~G~v~~t~lG~s~~~~e~iea~~~~~-~~-~v~Le~~l~~g-~~~~R~~~~~~~~~~~~~ae----a~~ivnnn~aAVll 98 (395)
T COG1921 26 IGTVLMTNLGRSLYSPEAIEAMKEAM-RA-PVELETDLKTG-KRGARLTELAELLCGLTGAE----AAAIVNNNAAAVLL 98 (395)
T ss_pred hhhheeccCCCccCCHHHHHHHHHHh-cc-cceeeeecccc-hhhHHHHHHHHHHhcccchh----heeeECCcHHHHHH
Confidence 45666777778888999999875533 21 11111111111 11222223333333333333 56888888889999
Q ss_pred HHhhcCCCCCCeEEEec-----ccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCC
Q 010538 119 VGEAFPWSHQSSYMYTM-----ENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFP 193 (508)
Q Consensus 119 ~~~~l~~~~g~~vl~~~-----~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~ 193 (508)
+..++. + +.+++++. ..|+.+-..+ +..|++++++-..... ...+++ .+
T Consensus 99 ~~~al~-~-~~EvVis~g~lV~gg~~~v~d~~---~~aG~~l~EvG~tn~t-----------------~~~d~~--~A-- 152 (395)
T COG1921 99 TLNALA-E-GKEVVVSRGELVEGGAFRVPDII---RLAGAKLVEVGTTNRT-----------------HLKDYE--LA-- 152 (395)
T ss_pred HHhhhc-c-CCeEEEEccccccCCCCChhHHH---HHcCCEEEEecccCcC-----------------CHHHHH--HH--
Confidence 888883 3 44555553 2344444444 4459999888654332 245667 44
Q ss_pred CCCCCCCCceEEEEeCCCCC-CccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCC-CCCCC---CCCCcE
Q 010538 194 ERDPAGDAYNLFAFPSECNF-SGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQ-PPDLS---KYPVDF 268 (508)
Q Consensus 194 ~~~~~~~~t~lv~~~~~~n~-tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~-~~d~~---~~~~D~ 268 (508)
++++|+++.-.|.+|. --...+.+++.+++|+ +|+++++|.+.+.-.. ..++. ..|+|.
T Consensus 153 ----Ine~ta~llkV~s~~~~f~~~l~~~~l~~ia~~------------~~lpvivD~aSg~~v~~e~~l~~~la~GaDL 216 (395)
T COG1921 153 ----INENTALLLKVHSSNYGFTGMLSEEELVEIAHE------------KGLPVIVDLASGALVDKEPDLREALALGADL 216 (395)
T ss_pred ----hccCCeeEEEEeeccccccccccHHHHHHHHHH------------cCCCEEEecCCccccccccchhHHHhcCCCE
Confidence 4677787776666653 2234678889999998 9999999998865322 22333 448999
Q ss_pred EEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHh
Q 010538 269 VVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINS 348 (508)
Q Consensus 269 ~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 348 (508)
+++|++|++|||+ .|+++++++++++++..-. .+.++.+- ..++++.+|++.+..
T Consensus 217 V~~SgdKllgGPq-aGii~GkKelI~~lq~~~l---------------------~Ralrv~K---~tla~l~~aLe~y~~ 271 (395)
T COG1921 217 VSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPL---------------------KRALRVDK---ETLAALEAALELYLQ 271 (395)
T ss_pred EEEecchhcCCCc-cceEechHHHHHHHHhhhh---------------------hhhhhcCc---HhHHHHHHHHHHHcC
Confidence 9999999999998 5999999999988765411 23333333 347788889997655
Q ss_pred cChHHHHHHHHHHHHHHHHHHhc
Q 010538 349 LTVPAICRHIASLGMYVRKVLLS 371 (508)
Q Consensus 349 ~g~~~i~~~~~~l~~~l~~~L~~ 371 (508)
........+..++.....+.|.+
T Consensus 272 ~~~~~~~~~~~~~l~~~~~~l~~ 294 (395)
T COG1921 272 PEILGERLRTLRLLTQPAEALLA 294 (395)
T ss_pred chhhhhhhHHHHhhccHHHHHHH
Confidence 32223333444444444455544
No 359
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.32 E-value=5.1e-10 Score=124.52 Aligned_cols=338 Identities=11% Similarity=0.031 Sum_probs=209.9
Q ss_pred eeeeCCCCCCCCHHHH-HHHHH--HhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHH
Q 010538 42 VYLDHAGATLYSELQM-EAIFR--DFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKL 118 (508)
Q Consensus 42 iyld~~~~~~~~~~~~-~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~ 118 (508)
.|+..+...-.-|.++ ..+++ .|++.+ .|... ..+...-+.+-....+++++.|.+.. +-.+-.++|.+-..
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY--TPYQp-EisQG~Lqal~e~Qtmi~~LtGm~va--NASl~D~atA~aEA 156 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAY--TPYQP-EIAQGRLEALLNFQQMTIDLTGLDLA--NASLLDEATAAAEA 156 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCchhhhcC--CCCCc-hhhhHHHHHHHHHHHHHHHHhCchhh--hhhhccchhHHHHH
Confidence 4555555555556666 44433 111111 12211 12333455566788899999998755 44555666654443
Q ss_pred HHhhcCCC--CCCeEEEecccccchHHHHH-HHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCC
Q 010538 119 VGEAFPWS--HQSSYMYTMENHNSVLGIRE-YALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER 195 (508)
Q Consensus 119 ~~~~l~~~--~g~~vl~~~~~h~s~~~~~~-~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~ 195 (508)
+..+.... ...+|+++..-||.+...++ +++..|++++.-+ + + +.+
T Consensus 157 ~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~~------~--------------------~--~~~--- 205 (954)
T PRK12566 157 MALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVDA------V--------------------D--NLA--- 205 (954)
T ss_pred HHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEcc------h--------------------h--hcC---
Confidence 33333222 25689999999999887666 4566788877511 1 1 111
Q ss_pred CCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccc--cCCCCCCCCCCCCCcEEEEec
Q 010538 196 DPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAK--GCVTQPPDLSKYPVDFVVMSF 273 (508)
Q Consensus 196 ~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~--~~g~~~~d~~~~~~D~~~~S~ 273 (508)
++++..|++..+ |..|.+.|+++|.+++|+ +|++++ +++. +.+.. -...++|+|++++++
T Consensus 206 ---~~~~~~v~vq~P-~~~G~i~d~~~i~~~~h~------------~gal~~-~~~d~laL~ll-~~Pge~GADI~vG~~ 267 (954)
T PRK12566 206 ---AHAVFGALLQYP-DTHGEIRDLRPLIDQLHG------------QQALAC-VAADLLSLLVL-TPPGELGADVVLGST 267 (954)
T ss_pred ---CCCEEEEEEECC-CCceEEccHHHHHHHHHH------------cCCEEE-EEeCHHHHhCC-CChhhcCCcEEeeCC
Confidence 235778888876 568999999999999998 788755 4332 22222 224678999999977
Q ss_pred cc-----cccCCCcceEEEEechhHhhhccccccCceEEecccchhhhh--hccCccccccCCCCChhH---HHHHHHH-
Q 010538 274 YK-----IFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVK--RRQGVEELFEDGTASFLS---IASIRHG- 342 (508)
Q Consensus 274 ~K-----~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~gt~~~~~---~~~l~~a- 342 (508)
+- .||||. .|++-+++++..++.-.+.|-.. .......|.. ....+.-|++-.|.|+-. +.++.++
T Consensus 268 Q~fGvp~~~GGP~-ag~~a~~~~~~R~~PGRivG~s~--D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~ 344 (954)
T PRK12566 268 QRFGVPMGYGGPH-AAYFACRDDYKRAMPGRIIGVSR--DARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGF 344 (954)
T ss_pred CcCCCCCCCCCCC-eeeeeehHHHHhhCCCCccceee--cCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 64 466663 79999999876655544444211 1111111111 112234566778888742 3333333
Q ss_pred -HHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHH
Q 010538 343 -FNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLA 421 (508)
Q Consensus 343 -l~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L 421 (508)
+-++...|+.++.+++..++.+|.+.|.+. |+++..+. + -.-+.+++.. + ..++.+..
T Consensus 345 Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-------g~~~~~~~--f------F~~~~v~~~~-~-----~~~~~~~a 403 (954)
T PRK12566 345 YAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-------GIKRLNRH--F------FDTLTLEVGG-A-----QAAIIESA 403 (954)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-------CCccccCC--c------cceEEEEccC-C-----HHHHHHHH
Confidence 234456689999999999999999999885 78776542 1 2344444421 1 23477777
Q ss_pred hhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhh
Q 010538 422 SLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 422 ~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~ 496 (508)
.+.||-++.- .++.+.||+.--+|.+|++.++.++.
T Consensus 404 ~~~~~n~r~~---------------------------------------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 404 EAARINLRIL---------------------------------------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHCCCeeEEe---------------------------------------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 7889988752 14679999999999999999998873
No 360
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.31 E-value=1.3e-09 Score=115.36 Aligned_cols=366 Identities=11% Similarity=0.052 Sum_probs=193.1
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceE-EEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKC-IFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i-~~t~g 111 (508)
++.-|+|..+ .+--+|.+++++.++........+ .+ .......++-+++++++......+.+ .++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~--~~----~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT--LD----LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc--cc----cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 7788999743 355688898888665432111111 10 11233445556777776432100144 44689
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEecccccch-HHHHHHHH----hcC-----CeEEEEccCCccCccccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMENHNSV-LGIREYAL----SQG-----AAAFAIDVEEAVDNDGLSESLVTSTKIS 180 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~h~s~-~~~~~~~~----~~G-----~~v~~v~~~~~~~~~~l~~~~~~~~~~~ 180 (508)
+++|+..++.... ..+...|++....|-.. ........ +.+ ..+..+|........ ... .......
T Consensus 111 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 187 (442)
T TIGR00709 111 GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCP-FGI--GGEAGSN 187 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcccccc-ccC--CchhHHH
Confidence 9999988776432 33455677665444333 33322211 011 112333332111000 000 0000000
Q ss_pred cchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC-HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCCC
Q 010538 181 LLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN-LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQP 258 (508)
Q Consensus 181 ~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~-i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~~ 258 (508)
...+.++ +.+++-....+++..|++..+.+..|.+.| .+.+.++.+ +|+++|+++|.|+++. +|..-
T Consensus 188 ~~~~~~~--~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~---------lc~~~g~llI~DEV~tGfGRtG 256 (442)
T TIGR00709 188 ASIEYFE--NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIRE---------VTRKHDIKLILDEVQAGFGRSG 256 (442)
T ss_pred HHHHHHH--HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHH---------HHHHcCCEEEEeccccCCCCCC
Confidence 0001112 111100011245677777777777787754 333333322 4445999999999986 33221
Q ss_pred --CCC--CCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 259 --PDL--SKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 259 --~d~--~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
... .....|++++ .|.+++=.-+|+++++++ .+.+.+...+ ...+.|..
T Consensus 257 ~~~a~~~~gv~PDiv~~--gK~l~~G~Pigav~~~~~-~~~~~~~~~~------------------------~T~~gnpl 309 (442)
T TIGR00709 257 TMFAFEHAGIEPDFVVM--SKAVGGGLPLAVLLIAPE-FDAWQPAGHT------------------------GTFRGNQL 309 (442)
T ss_pred chhHHHHcCCCCcEEEE--cccccCCcccEEEEEchH-HhccCCCcCC------------------------CCCCcCHH
Confidence 111 1224688886 497663112899998877 3433221110 01124555
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC-----
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG----- 409 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----- 409 (508)
..++..++++.+.+. .+.++..++.++|.+.|+++.. ...++..... .+.++.+.+.+...
T Consensus 310 a~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~-----~~~~v~~vrG------~Gl~~~ie~~~~~~~~~~~ 375 (442)
T TIGR00709 310 AMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIK-----EHPCIGNVRG------RGLMQGIMIVDERQSKDAT 375 (442)
T ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHH-----hCCCeeeeec------cceEEEEEEccCccccccc
Confidence 566667788877653 5667888888999888876521 1112222111 26777777743211
Q ss_pred --Cc--c-CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCC
Q 010538 410 --SW--F-GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMST 484 (508)
Q Consensus 410 --~~--~-~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 484 (508)
.. . -...+...+.++|+.+.+.. ...+.+|+.+..-.|
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------------------------------------~~~~~l~~~Ppl~it 418 (442)
T TIGR00709 376 GAYPRDCELAAAIQGACFENGLLLETGG-------------------------------------REGEVFRLLCPITID 418 (442)
T ss_pred ccCCcchHHHHHHHHHHHHCCeEEeecC-------------------------------------CCCCEEEEECCCCCC
Confidence 00 0 02346667778999986521 014789999999999
Q ss_pred HHHHHHHHHhhhhhhhhh
Q 010538 485 FEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 485 ~eev~~l~~~~~~~~~~~ 502 (508)
++|++++++++.+.+..+
T Consensus 419 ~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 419 QEECEEGISRFKQAVEEA 436 (442)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999877543
No 361
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.31 E-value=2.1e-09 Score=114.35 Aligned_cols=359 Identities=11% Similarity=0.079 Sum_probs=200.8
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .+--+|.+.+++.++.. .........+ ......++.+++++++....+ .+.|++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-~l~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~sG 116 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVD-QLEHVILAGF-----SHEPVIELSERLVKITPPGLS--RCFYADNG 116 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHH-hcCCcccccc-----CCHHHHHHHHHHHHhCCCCcC--EEEEeCCc
Confidence 7888999743 35558888888766543 2110000011 123344556667776653445 79999999
Q ss_pred HHHHHHHHhhcC------C-CCCCeEEEecccc-cchHHHHHHHHh------cC---CeEEEEccCCccCc-cccccccc
Q 010538 113 TAALKLVGEAFP------W-SHQSSYMYTMENH-NSVLGIREYALS------QG---AAAFAIDVEEAVDN-DGLSESLV 174 (508)
Q Consensus 113 t~al~~~~~~l~------~-~~g~~vl~~~~~h-~s~~~~~~~~~~------~G---~~v~~v~~~~~~~~-~~l~~~~~ 174 (508)
++|+..++.... - .+..+||.....| .........-.. ++ ..+..+|....... ... .
T Consensus 117 sEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~----~ 192 (466)
T PRK07030 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGM----S 192 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCC----C
Confidence 999988776531 1 2234566555433 333222221000 00 01222332110000 000 0
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeC-CCCCCccccCH----HHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPS-ECNFSGSRFNL----DLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~-~~n~tG~~~~i----~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
....-..+++.++ +.+++ ..+++..|++.- ++...|.+.|. +.+.++|++ +|+++|+|
T Consensus 193 ~~~~~~~~l~~le--~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~------------~g~llI~D 255 (466)
T PRK07030 193 WEEHSRRMFAHME--QTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDR------------YGVHLIHD 255 (466)
T ss_pred HHHHHHHHHHHHH--HHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHH------------cCCEEEEe
Confidence 0000001234455 44432 235678888887 57777887773 455555555 99999999
Q ss_pred cccc-CCCCCC----CCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQPP----DLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~~~----d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
+++. +|..-. +......|+++++ |.+++= .-+|.+++++++.+.+....... .
T Consensus 256 EV~TGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~-------------------~ 314 (466)
T PRK07030 256 EIAVGFGRTGTMFACEQAGIRPDFLCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPTL-------------------R 314 (466)
T ss_pred ehhhCcCccccchHHHhcCCCCCEEeee--hhccCCcccceEEEecHHHHHHHhcccccc-------------------c
Confidence 9976 443211 1122347999997 965521 12799999998866543210000 0
Q ss_pred ccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
.....+| -|..+.++..++++.+.+ +++.++..++.++|.+.|+++.. .+.+.-+ .+ ++.++.
T Consensus 315 ~~~h~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~---~~~v~~v--rG-------~Gl~~g 379 (466)
T PRK07030 315 AFLHSHSYTGNPLACAAALATLDIFEQ---DNVIENNRALARRMAEATAHLAD---HPHVAEV--RQ-------TGMILA 379 (466)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhc---CCCEEEe--Ee-------ceeEEE
Confidence 0011122 355667777778888766 45678888999999999877620 1222111 11 267777
Q ss_pred EEeeCCCCC--cc--C---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 402 FNLKRPDGS--WF--G---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 402 ~~~~~~~~~--~~--~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
+.+...... .+ . ...+.+.+.++|+.+.+. .+.
T Consensus 380 ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------------------g~~ 419 (466)
T PRK07030 380 IEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL----------------------------------------GSV 419 (466)
T ss_pred EEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----------------------------------------CCE
Confidence 776431110 00 0 134667778899998641 357
Q ss_pred EEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+|+.+.+-.|++||+.+++.+.+.++.+
T Consensus 420 i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 420 VYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888765
No 362
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.30 E-value=1.9e-09 Score=111.01 Aligned_cols=314 Identities=11% Similarity=0.051 Sum_probs=186.0
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+.-+|.+++++.+++ .+... ....+ ..+...++.++++++.+. + .+.|++++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql-~~~~~-~~~~~-----~~~~~~~la~~l~~~~~~--~--~v~~~~SG 90 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQL-EKLVV-AGPMF-----EHEEKEEMLEELSKWVNY--E--YVYMGNSG 90 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHH-HhcCC-ccCCc-----CCHHHHHHHHHHHhhcCC--C--EEEEeCch
Confidence 6788999733 4555788988876644 33211 11111 123455666778888754 4 68999999
Q ss_pred HHHHHHHHhhcCC-CCCCeEEEecccccc-hHHHHHHHHh----cCC-----eEEEEccCCccCcccccccccccccccc
Q 010538 113 TAALKLVGEAFPW-SHQSSYMYTMENHNS-VLGIREYALS----QGA-----AAFAIDVEEAVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 113 t~al~~~~~~l~~-~~g~~vl~~~~~h~s-~~~~~~~~~~----~G~-----~v~~v~~~~~~~~~~l~~~~~~~~~~~~ 181 (508)
|+|+..++..... ++.++|++....|-+ .......... .+. .+..+|. +
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~--------------------~ 150 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF--------------------N 150 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC--------------------C
Confidence 9999988876643 333677777654433 3222211000 011 1111111 1
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccC---
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC--- 254 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~--- 254 (508)
|++.++ +.+ .++++.|++.......|...+ ++++.++|++ +|+++|+|++++.
T Consensus 151 d~~~l~--~~i------~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~------------~gillI~DEv~tG~Rt 210 (364)
T PRK04013 151 DVEAAK--EAI------TKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTED------------VGALLIADEVQSGLRT 210 (364)
T ss_pred CHHHHH--HHh------cCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEechhhcCCC
Confidence 355666 444 357899999988887777665 6677777776 9999999999873
Q ss_pred CCC-CCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCCh
Q 010538 255 VTQ-PPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASF 333 (508)
Q Consensus 255 g~~-~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 333 (508)
|.. ..+.-....|+++++ |.+++-.-+|.++.+++. .+...+ . ...-|.
T Consensus 211 G~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~~----~~~~~~-~-----------------------T~~gnp 260 (364)
T PRK04013 211 GKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFDV----ERGKHG-S-----------------------TFGGNP 260 (364)
T ss_pred CchhHHHhcCCCCCEEEec--ccccCCceeEEEEecccc----cCCCcC-C-----------------------CCCcCH
Confidence 210 011112347888886 966621116777776654 111100 0 112345
Q ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccC
Q 010538 334 LSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFG 413 (508)
Q Consensus 334 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 413 (508)
.+.++..+.++.+.+.++ .++.++. + ..+.. +. +.+-.. ++-++.+.+...
T Consensus 261 ~~~aaa~a~l~~i~~~~l---~~~~~~~---l-~~l~~-------~~---v~~vRG------~Gl~~gve~~~~------ 311 (364)
T PRK04013 261 LACKAVAVTLRILRRERL---VEKAGEK---F-IEIKG-------ER---VVTTRG------RGLMIGIVLKKP------ 311 (364)
T ss_pred HHHHHHHHHHHHHHhccH---HHHHHHH---H-HHhcc-------Cc---ceeeee------CcEEEEEEeCCc------
Confidence 566677778888877543 3333332 2 12211 11 122111 267777777532
Q ss_pred HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHH
Q 010538 414 YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRC 493 (508)
Q Consensus 414 ~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~ 493 (508)
...+.+.+.++|+.+.+. ..+.+|+.+..-.|++|++.+++
T Consensus 312 ~~~i~~~~~~~Gll~~~~---------------------------------------g~~vlr~~Ppl~it~~~i~~~~~ 352 (364)
T PRK04013 312 VGKYVEELQNRGYLVHTA---------------------------------------GQRVIRLLPPLIISKDTMEEAKS 352 (364)
T ss_pred HHHHHHHHHhCCcEEeeC---------------------------------------CCCEEEEeCCcccCHHHHHHHHH
Confidence 234778888899998641 13689999999999999999999
Q ss_pred hhhhhhhh
Q 010538 494 SSFDFVNF 501 (508)
Q Consensus 494 ~~~~~~~~ 501 (508)
.+.+.++-
T Consensus 353 ~l~~~l~~ 360 (364)
T PRK04013 353 AIEGVIND 360 (364)
T ss_pred HHHHHHHH
Confidence 99987754
No 363
>PRK07046 aminotransferase; Validated
Probab=99.29 E-value=5e-09 Score=111.01 Aligned_cols=350 Identities=11% Similarity=0.001 Sum_probs=192.6
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.++.. ... ... . ......++.+.+.+.++ .+ .+.|++++
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~-~~~--~~~-~-----~~~~~~~lAe~l~~~~~--~~--~v~F~nSG 139 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQAR-RGL--TTM-L-----PSEDAAWVGEELARRFG--LP--YWQVATTA 139 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHH-hCC--CCC-C-----CCHHHHHHHHHHHHHhC--CC--EEEEECCH
Confidence 6788999643 23446888888766543 211 111 1 12233445566767764 45 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccchH-HHHHHHHhcCCeEEEEccCCccCcccc-ccccccccccccchhhhhcC
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNSVL-GIREYALSQGAAAFAIDVEEAVDNDGL-SESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~-~~~~~~~~~G~~v~~v~~~~~~~~~~l-~~~~~~~~~~~~d~~~l~~~ 189 (508)
|+|...+++... ..+.+.|+.....|-... ...... ..+ ....-+.. .+....+ ...+.... .|++.++
T Consensus 140 tEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~-~~~-~~~~~~~~-~g~~~~~~~~~~~~~~---nd~~~l~-- 211 (453)
T PRK07046 140 TDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDL-VDG-RPVQRPGL-LGQVHDLTATTRVVEF---NDLAALE-- 211 (453)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhc-cCC-CCCCCCCC-CCCCccccCceEeeCC---CCHHHHH--
Confidence 999988776542 344566776654443332 111111 011 00000000 0000000 00000000 1467777
Q ss_pred CCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc----CCCCCCCC
Q 010538 190 ASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG----CVTQPPDL 261 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~----~g~~~~d~ 261 (508)
+.+. .+++..|++.-+....|.+.| ++++.++|++ +|+++|+|++++ .|... ..
T Consensus 212 ~~l~-----~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~------------~g~llI~DEV~tfr~g~Gg~~-~~ 273 (453)
T PRK07046 212 AALA-----DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRR------------YGTLLVIDETHTISSGPGGYT-RA 273 (453)
T ss_pred HHhC-----CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH------------hCCEEEEEccccCccCCcchh-HH
Confidence 5552 246788898888888888888 4667777776 999999999985 33211 11
Q ss_pred CCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC--ChhHHHHH
Q 010538 262 SKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA--SFLSIASI 339 (508)
Q Consensus 262 ~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~~l 339 (508)
-....|+++++ |.+|+=..+|.+.++++..+.+.+...... .......+|. |...+++.
T Consensus 274 ~gv~PDi~t~g--K~lggG~Pi~av~g~~~i~~~~~~~~~~~~-----------------~~~~~~~~T~~gnpl~~aa~ 334 (453)
T PRK07046 274 HGLEPDFLVVG--KPIAGGVPCAVYGFSAELAERAQAAKASAP-----------------PGHSGIGTTLSANALAMAAM 334 (453)
T ss_pred hCCCccceeeh--hhhcCCCcceeeeehHHHHHHHhhccccCC-----------------CCCceeCCCCcccHHHHHHH
Confidence 12247888765 966631228999999998776543210000 0001123343 45556666
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc-------c
Q 010538 340 RHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW-------F 412 (508)
Q Consensus 340 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~ 412 (508)
.++++.+.+ ++..++..++.++|.+.|+++....+. .+.+.+. +.++.+.+.+..... .
T Consensus 335 ~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~~-~~~v~g~----------G~~~~i~~~~~~~~~~~~~~~~~ 400 (453)
T PRK07046 335 RATLAEVMT---EAAYAHMLALAARLAAGLRAVIARHGL-PWHVTRV----------GARVEFQFAPTPPRNGAEAAAAL 400 (453)
T ss_pred HHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEEe----------CcEEEEEEeCCCCCCHHHHhccc
Confidence 677777654 346788888888888888753210000 1122222 345555543211100 0
Q ss_pred C---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHH
Q 010538 413 G---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAK 489 (508)
Q Consensus 413 ~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~ 489 (508)
+ ...+...+.++||.+.+. .+.+++++. +|++||+
T Consensus 401 ~~~~~~~~~~~~~~~Gv~~~~~----------------------------------------~~~~~~~p~--~t~~did 438 (453)
T PRK07046 401 DPELEAALHLYLLNRGVLITPF----------------------------------------HNMMLVCPA--TTAADVD 438 (453)
T ss_pred CHHHHHHHHHHHHHCCCEEecc----------------------------------------cCcEEEeCC--CCHHHHH
Confidence 1 123555666789987641 245788875 7999999
Q ss_pred HHHHhhhhhhhhh
Q 010538 490 VNRCSSFDFVNFS 502 (508)
Q Consensus 490 ~l~~~~~~~~~~~ 502 (508)
++++++.+.++.+
T Consensus 439 ~~~~~~~~~l~~~ 451 (453)
T PRK07046 439 RLVAAFDACLGEL 451 (453)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998877543
No 364
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.29 E-value=9e-10 Score=116.21 Aligned_cols=204 Identities=13% Similarity=0.074 Sum_probs=123.7
Q ss_pred CCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCCCC----CCCCCCCCcEE
Q 010538 199 GDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVTQP----PDLSKYPVDFV 269 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~~~----~d~~~~~~D~~ 269 (508)
.+++..|++..+....|.+.| +++|.++|++ +|+++|+|++|+ +|... .+......|++
T Consensus 216 ~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~------------~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 216 PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDE------------HDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEecchhccCccchHHHHHhcCCCCCEE
Confidence 467899999989988898864 4456666665 999999999987 44431 12223358999
Q ss_pred EEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC--CCChhHHHHHHHHHHHHH
Q 010538 270 VMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG--TASFLSIASIRHGFNLIN 347 (508)
Q Consensus 270 ~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~l~~al~~~~ 347 (508)
+++ |.+ | ..|++ ..++..+..... +++.. ...+ +.|....++..++++.+.
T Consensus 284 ~~g--K~~--~-~~g~~-~~~~i~~~~~~~-~~~~~--------------------~~~~T~~gnpl~~aaa~a~L~~l~ 336 (431)
T TIGR03251 284 AFG--KKT--Q-VCGIM-AGRRVDEVADNV-FAVPS--------------------RLNSTWGGNLVDMVRATRILEIIE 336 (431)
T ss_pred Eec--ccC--c-cceEE-ecchHHHhhhhc-ccCcc--------------------ccCCCCCCCHHHHHHHHHHHHHHH
Confidence 875 754 3 23555 444321111111 11100 0112 235566777778888876
Q ss_pred hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCe
Q 010538 348 SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQ 427 (508)
Q Consensus 348 ~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~ 427 (508)
+.+ +.+++.++.++|.+.|+++.. ..++ ++.+... .+.++.+.+++.+ ....+.+.|.++||.
T Consensus 337 ~~~---l~~~~~~~g~~l~~~L~~l~~--~~~~--~i~~vrg------~G~~~~i~~~~~~----~~~~~~~~l~~~Gvl 399 (431)
T TIGR03251 337 EER---LVDNARVQGAHLLARLHELAA--EFPH--LVSNPRG------RGLMCAFDLPSTA----DRDEVIRQLYREGVL 399 (431)
T ss_pred hcC---HHHHHHHHHHHHHHHHHHHHH--hCcc--ceecccc------cceeEEEEeCCHH----HHHHHHHHHHhCCeE
Confidence 654 445556666666666654310 0011 2222211 2677788875421 123477888899999
Q ss_pred eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 428 LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 428 v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
+.+.. .+.+|+++++.+|++|++++++++.+
T Consensus 400 ~~~~g---------------------------------------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 400 LLGCG---------------------------------------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EecCC---------------------------------------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 86521 35799999999999999999998764
No 365
>PRK07483 hypothetical protein; Provisional
Probab=99.28 E-value=4e-09 Score=111.55 Aligned_cols=367 Identities=14% Similarity=0.095 Sum_probs=199.4
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .+--+|.+++++.+++..-.+..+. .+ ..+...++.+++++++....+ .+.|++++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~-~~-----~~~~~~~lae~L~~~~p~~~~--~v~f~~sG 99 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS-FF-----TTEPAEALADRLVAAAPAGLE--HVYFVSGG 99 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc-cc-----CCHHHHHHHHHHHHhCCCCCC--EEEEcCCc
Confidence 7888999754 4555888888876654321111111 01 123344556677777653345 79999999
Q ss_pred HHHHHHHHhhcC-C------CCCCeEEEecc-cccchHHHHHHHH------hcC---CeEEEEccCC-ccCccccccccc
Q 010538 113 TAALKLVGEAFP-W------SHQSSYMYTME-NHNSVLGIREYAL------SQG---AAAFAIDVEE-AVDNDGLSESLV 174 (508)
Q Consensus 113 t~al~~~~~~l~-~------~~g~~vl~~~~-~h~s~~~~~~~~~------~~G---~~v~~v~~~~-~~~~~~l~~~~~ 174 (508)
++|+..++.... . ....+||.... -|........... ..+ ..+..+|... ..... .++ .
T Consensus 100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~--~ 176 (443)
T PRK07483 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQR-AGE--S 176 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccc-cCC--C
Confidence 999988766432 1 22345666543 3433333322110 000 1112222110 00000 000 0
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCC-CCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 175 TSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECN-FSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 175 ~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n-~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
........++.++ +.+.+ ...+++..|++..+.. .-|.+.| ++.+.++|++ ||+++|+|
T Consensus 177 ~~~~~~~~~~~l~--~~~~~--~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~------------~gillI~D 240 (443)
T PRK07483 177 DEAYGQRLADELE--AKILE--LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDR------------YGVLLILD 240 (443)
T ss_pred HHHHHHHHHHHHH--HHHHh--cCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHH------------hCCEEEEe
Confidence 0000000123444 33321 1135678888887775 3477776 4455555555 99999999
Q ss_pred cccc-CCCCC----CCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
+++. +|..- .+......|+++++ |.+++-. -+|.++++++..+.+.+.- +
T Consensus 241 EV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~-~--------------------- 296 (443)
T PRK07483 241 EVMCGMGRTGTLFACEEDGVAPDLVTIA--KGLGAGYQPIGAVLASDRIYDAIADGS-G--------------------- 296 (443)
T ss_pred cceeCcccCcHHHHHhhcCCCCCeeeeh--hhhccCccccEEEEEcHHHHHHHhcCC-C---------------------
Confidence 9986 33211 01112247999986 9655211 2799999988866554210 0
Q ss_pred ccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
.....+| -|..+.++..++++.+.+ +.+.++..++.++|.+.|+++.. ...++..-. -++.++.
T Consensus 297 ~~~h~~T~~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~-----~~~~i~~vR------G~Glm~g 362 (443)
T PRK07483 297 FFQHGHTYLGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLG-----QHPHVGDIR------GRGLFVG 362 (443)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHh-----cCCCeeeEe------ecccEEE
Confidence 0001122 345556666777887766 45678888888998888876411 111111111 1266777
Q ss_pred EEeeCCCC--CccC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 402 FNLKRPDG--SWFG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 402 ~~~~~~~~--~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
+.+..... ..++ ...+.+.+.++|+.+.+...+..+ ..++.
T Consensus 363 ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~--------------------------------~~~~~ 410 (443)
T PRK07483 363 VELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDG--------------------------------VRGDH 410 (443)
T ss_pred EEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccC--------------------------------CCCCE
Confidence 77643210 0011 134677788899998753111000 01468
Q ss_pred EEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
+|+.+-+-.|++|+|++++++.+.++.+
T Consensus 411 l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 411 VLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887654
No 366
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.28 E-value=1.2e-09 Score=116.09 Aligned_cols=349 Identities=13% Similarity=0.117 Sum_probs=188.9
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+.+++.+++. ... .... ......++-+++.+.+.. .+ .+.|++++
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~-~~~---~~~~-----~~~~~~~lAe~l~~~~p~-~~--~v~f~~SG 164 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMK-KGT---SFGA-----PCLLENVLAEMVIDAVPS-VE--MVRFVNSG 164 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHh-hCC---CCCC-----CCHHHHHHHHHHHHhCCC-CC--EEEEeCCh
Confidence 6788999744 33446888888766543 211 1111 112233445566666643 35 89999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCC
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGAS 191 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~ 191 (508)
|+|+..++.... ..+..+|+.....|-....+.-.....|......|...........+...... .|++.++ +.
T Consensus 165 sEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---nd~~~l~--~~ 239 (474)
T PLN02482 165 TEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY---NDLEAVK--KL 239 (474)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC---CChHHHH--HH
Confidence 999988776542 23456676655433332211111000010000001000000000000000000 0355666 55
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCccccCHH----HHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC-C----CCC
Q 010538 192 FPERDPAGDAYNLFAFPSECNFSGSRFNLD----LINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP-P----DLS 262 (508)
Q Consensus 192 l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~----~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~-~----d~~ 262 (508)
+++ ..+++..|++..+....|.+.|.+ .+.++|++ +|+++|+|+++. |..- . ..-
T Consensus 240 l~~---~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~------------~g~lLI~DEV~t-GfR~g~~ga~~~~ 303 (474)
T PLN02482 240 FEA---NKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKE------------NGALLVFDEVMT-GFRIAYGGAQEYF 303 (474)
T ss_pred HHh---CCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEecccc-CeecCcchHhHHh
Confidence 532 235678999999999999988854 56666665 999999999985 3211 0 001
Q ss_pred CCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC--CChhHHHHHH
Q 010538 263 KYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT--ASFLSIASIR 340 (508)
Q Consensus 263 ~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~l~ 340 (508)
....|++++ .|.+|+=.-+|.+.+++++.+.+.+. + ..+..+| .|...+++..
T Consensus 304 gv~PDi~t~--gK~lggG~Pigav~g~~ei~~~~~~~---~--------------------~~~~~~T~~gnpl~~aAal 358 (474)
T PLN02482 304 GITPDLTTL--GKVIGGGLPVGAYGGRREIMEMVAPA---G--------------------PMYQAGTLSGNPLAMTAGI 358 (474)
T ss_pred CCCCCEEEe--cchhhCCCceEEEEEcHHHHHhhccC---C--------------------CcccccCcchhHHHHHHHH
Confidence 124688766 59776311178888998887765431 0 0112233 3445566666
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC------CccC-
Q 010538 341 HGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG------SWFG- 413 (508)
Q Consensus 341 ~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~- 413 (508)
++++.+.+ +.+.+++.++.++|++.|+++.... ++.+..... .+++.+.+...+. ..-+
T Consensus 359 a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~---g~~~~~~~v--------~g~~gi~f~~~~~~~~~~~~~~d~ 424 (474)
T PLN02482 359 HTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKA---GHEMCGGYI--------SGMFGFFFTEGPVYNFADAKKSDT 424 (474)
T ss_pred HHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEccc--------ceEEEEEEecCCccChhhhccCCH
Confidence 67787754 4577888899999999887752100 111221111 3355444432110 0001
Q ss_pred --HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHH
Q 010538 414 --YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVN 491 (508)
Q Consensus 414 --~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l 491 (508)
...+.+.+.++||.+.+... +. + .+..-+|++|||++
T Consensus 425 ~~~~~~~~~l~~~Gv~~~~~~~--------------------------------------~~--~-~psl~ht~~dId~~ 463 (474)
T PLN02482 425 AKFARFHRGMLEEGVYLAPSQF--------------------------------------EA--G-FTSLAHTEEDIDFT 463 (474)
T ss_pred HHHHHHHHHHHHCCeEEeccCC--------------------------------------CC--C-cCCCCCCHHHHHHH
Confidence 13466777789999865210 01 1 25666799999999
Q ss_pred HHhhhhhhh
Q 010538 492 RCSSFDFVN 500 (508)
Q Consensus 492 ~~~~~~~~~ 500 (508)
++++.+.++
T Consensus 464 l~al~~~l~ 472 (474)
T PLN02482 464 IAAAERVLA 472 (474)
T ss_pred HHHHHHHHH
Confidence 999988765
No 367
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.27 E-value=2.5e-09 Score=112.80 Aligned_cols=346 Identities=14% Similarity=0.078 Sum_probs=192.6
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|..+ .+--+|.+++++.++.. .. +.... ......++.+++.+.+. ..+ .+.|++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-~~---~~~~~-----~~~~~~~la~~l~~~~p-~~~--~v~f~~sG 118 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAE-NG---VLYGT-----PTELEIEFAKMLKEAIP-SLE--KVRFVNSG 118 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHH-hC---CccCC-----CCHHHHHHHHHHHHhCC-CCc--EEEEeCCH
Confidence 6788999743 34447888888766543 21 11111 11223445556666654 234 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecccccch-HHHHHHHHhcCCeEEEE--ccCCccCccccccccccccccccchhhhhc
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYTMENHNSV-LGIREYALSQGAAAFAI--DVEEAVDNDGLSESLVTSTKISLLPIQRRK 188 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~~~~h~s~-~~~~~~~~~~G~~v~~v--~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~ 188 (508)
++|+..++.... ..+...||.....|-.. ...+.. .|...... |...........+....+ -.|++.++
T Consensus 119 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~- 191 (428)
T PRK12389 119 TEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVA---AGSGPSTLGTPDSAGVPKSIAQEVITVP---FNDIEALK- 191 (428)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHh---cCCcccccCCCCCCCCCCcccCceEEcC---CCCHHHHH-
Confidence 999988776442 33456677665444332 222221 11111000 000000000000000000 01456666
Q ss_pred CCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCC----C
Q 010538 189 GASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPP----D 260 (508)
Q Consensus 189 ~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~----d 260 (508)
+.+.+. .+++..|++..+....|.+.| +++|.++|++ +|+++|+|++++..-... .
T Consensus 192 -~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~------------~g~llI~DEV~tG~Rt~~~~a~~ 255 (428)
T PRK12389 192 -EALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHE------------AGALVIYDEVITAFRFMYGGAQD 255 (428)
T ss_pred -HHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEEccccccccCcchhhH
Confidence 555321 356788999889999999998 7788888887 999999999987431111 0
Q ss_pred CCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC--CCChhHHHH
Q 010538 261 LSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG--TASFLSIAS 338 (508)
Q Consensus 261 ~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~ 338 (508)
......|+++++ |.+++=.-+|.+.+++++.+.+.+. +. .+..+ ..|....++
T Consensus 256 ~~gv~PDivt~g--K~lggG~Pi~av~~~~~i~~~~~~~--~~---------------------~~~~~T~~gnpl~~Aa 310 (428)
T PRK12389 256 LLGVEPDLTALG--KIIGGGLPIGAYGGRKDIMEQVAPL--GP---------------------AYQAGTMAGNPASMAA 310 (428)
T ss_pred HhCCCCCeeeec--hhhcCCCceeEEeEHHHHHhhhccC--CC---------------------cccccCCccCHHHHHH
Confidence 112247887665 9666311178888888887655421 00 01112 234556666
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce-EEEecCCCCCcccCCCCceEEEEeeCCCCCc------
Q 010538 339 IRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV-CTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW------ 411 (508)
Q Consensus 339 l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------ 411 (508)
..++++.+.+. ++.++..++.++|++.|+++... .+. +.+... .+++.+.+.......
T Consensus 311 ala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~--~~~~~~v~r~----------~g~~gi~~~~~~~~~~~~~~~ 375 (428)
T PRK12389 311 GIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEK--HGITITINRL----------KGALTVYFTDEKVTNYDQAER 375 (428)
T ss_pred HHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEEec----------CcEEEEEEeCCCCCChhhhcc
Confidence 77778877653 57788899999999988764200 011 111111 335555553211100
Q ss_pred cC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHH
Q 010538 412 FG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDA 488 (508)
Q Consensus 412 ~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev 488 (508)
.+ ...+.+.+.++||.+.+.. .+.+. +.+-.|++|+
T Consensus 376 ~~~~~~~~~~~~l~~~Gv~~~~~~---------------------------------------~~~~~--~~l~~t~e~i 414 (428)
T PRK12389 376 SDGEAFGKFFKLMLNQGINLAPSK---------------------------------------YEAWF--LTTAHTEEDI 414 (428)
T ss_pred cCHHHHHHHHHHHHHCCcEeecCC---------------------------------------CCCee--ecCCCCHHHH
Confidence 01 2346777888999987631 12233 4456799999
Q ss_pred HHHHHhhhhhhh
Q 010538 489 KVNRCSSFDFVN 500 (508)
Q Consensus 489 ~~l~~~~~~~~~ 500 (508)
+++++++.+.++
T Consensus 415 d~~~~~l~~~l~ 426 (428)
T PRK12389 415 EETLEAVDRAFA 426 (428)
T ss_pred HHHHHHHHHHHH
Confidence 999999987764
No 368
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.26 E-value=3.1e-09 Score=113.03 Aligned_cols=362 Identities=10% Similarity=0.028 Sum_probs=195.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC-----CCCCceEE
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA-----SMKDYKCI 107 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~~i~ 107 (508)
++.-|+|..+ .+--+|.+++++.++.. .........+. .....++-+++++++.. ..+ .+.
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~-~l~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~--~v~ 133 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAG-ELEQVMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLS--KVF 133 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHH-hCCCccccccC-----CHHHHHHHHHHHHhCCCcccCCCCC--EEE
Confidence 6788999743 35568888888766442 21100010111 12234555666676643 234 799
Q ss_pred EcCChHHHHHHHHhhcC-C------CCCCeEEEecccc-cchHHHHHHHHh------cC---CeEEEEccCCccCccccc
Q 010538 108 FTSGATAALKLVGEAFP-W------SHQSSYMYTMENH-NSVLGIREYALS------QG---AAAFAIDVEEAVDNDGLS 170 (508)
Q Consensus 108 ~t~g~t~al~~~~~~l~-~------~~g~~vl~~~~~h-~s~~~~~~~~~~------~G---~~v~~v~~~~~~~~~~l~ 170 (508)
|++++++|+..++.... + ....+||.....| ............ ++ ..+..+|........ ..
T Consensus 134 f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~-~~ 212 (472)
T PRK08742 134 YADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAE-PG 212 (472)
T ss_pred EeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccc-cC
Confidence 99999999988776542 1 1235666665433 333322221100 00 012233321100000 00
Q ss_pred cccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeC-CCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 171 ESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPS-ECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~-~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
+ .....-..+++.++ +.+++ ..+++..|++.- +....|.+.|.+..-+-+++ +|+++|+++|+|
T Consensus 213 ~--~~~~~~~~~~~~l~--~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~--------lc~~~gillI~D 277 (472)
T PRK08742 213 Q--SAEDYALQAADALQ--ALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRARE--------LCDAHGAFLIAD 277 (472)
T ss_pred C--CHHHHHHHHHHHHH--HHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHHH--------HHHHcCCEEEEe
Confidence 0 00000000244555 44421 135678888877 47777887774433333333 455599999999
Q ss_pred cccc-CCCCC----CCCCCCCCcEEEEeccccccCCC-cceEEEEechhHhhhccccccCceEEecccchhhhhhccCcc
Q 010538 250 AAKG-CVTQP----PDLSKYPVDFVVMSFYKIFGYPT-GLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVE 323 (508)
Q Consensus 250 ~a~~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (508)
+++. +|..- .+......|+++++ |.+++-. -+|.+++++++.+.+.+....+
T Consensus 278 EV~TGfGRtG~~~a~e~~gv~PDiv~~g--Kgl~gG~~Plaav~~~~ei~~~~~~~~~~~-------------------- 335 (472)
T PRK08742 278 EIATGFGRTGTLFACEQAGVMPDLLCLS--KGLTGGFLPLSAVLATQQLYDAFLDDSRER-------------------- 335 (472)
T ss_pred chhhCCCCCccchHHHhcCCCCCEEEEc--ccccCCCCCcceeeccHHHHHHhhccCccC--------------------
Confidence 9986 44321 11112347999997 9665211 2789999988865443210000
Q ss_pred ccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEE
Q 010538 324 ELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVS 401 (508)
Q Consensus 324 ~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 401 (508)
.....+| -|....++..++++.+.+. ++.++..++.++|.+.++.+. ...++.+-.. ++.++.
T Consensus 336 ~~~h~~T~~gnpl~~Aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~~~~~~------~~~~i~dvRG------~Gl~~g 400 (472)
T PRK08742 336 AFLHSHSYTGNPLACAAALATLDIFADD---DVIARNQPTAARMTQLAAQIG------EHPHVADVRQ------AGMVVA 400 (472)
T ss_pred ccCcCCCCCccHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHh------cCCCeeeEec------cceEEE
Confidence 0001122 3556677777788887764 455666777777776655431 1111222111 267777
Q ss_pred EEeeCCCC--CccC-----HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCce
Q 010538 402 FNLKRPDG--SWFG-----YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGA 474 (508)
Q Consensus 402 ~~~~~~~~--~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (508)
+.+..... ..+. ...+.+.+.++||.+++. .+.
T Consensus 401 iel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------------------g~v 440 (472)
T PRK08742 401 FELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----------------------------------------GDV 440 (472)
T ss_pred EEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----------------------------------------CCE
Confidence 77742111 0011 134667777899998651 368
Q ss_pred EEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 475 IRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 475 iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
||+.+.+-.|++||+.+++.+.+.++.
T Consensus 441 i~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 441 LYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987654
No 369
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.26 E-value=3.9e-09 Score=112.15 Aligned_cols=362 Identities=13% Similarity=0.078 Sum_probs=193.7
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCC-CceEEEc-C
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMK-DYKCIFT-S 110 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~~~i~~t-~ 110 (508)
++..|+|..+ .+--+|.+++++.+++..... .....+ ......++-+++.+++..... ...+.|+ +
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~-----~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHTLDL-----TTPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhc-cccccc-----CCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 7888999733 355588888887665422111 010011 112233334555555532210 0146665 7
Q ss_pred ChHHHHHHHHhhcC-CCCCCeEEEeccc-ccchHHHHHHHHh------cC---CeEEEEccCCccCcccccccccccccc
Q 010538 111 GATAALKLVGEAFP-WSHQSSYMYTMEN-HNSVLGIREYALS------QG---AAAFAIDVEEAVDNDGLSESLVTSTKI 179 (508)
Q Consensus 111 g~t~al~~~~~~l~-~~~g~~vl~~~~~-h~s~~~~~~~~~~------~G---~~v~~v~~~~~~~~~~l~~~~~~~~~~ 179 (508)
++++|+..++.... ..+...||..... |......+..... .+ ..+..+|........ ... ......
T Consensus 135 SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~--~~~~~~ 211 (464)
T PRK06938 135 TGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCP-FGL--GGEAGV 211 (464)
T ss_pred CcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcccccc-ccC--chhhHH
Confidence 99999988776542 2344566665543 3333333322100 00 112333332110000 000 000000
Q ss_pred ccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-C
Q 010538 180 SLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-C 254 (508)
Q Consensus 180 ~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~ 254 (508)
..+.+.++ +.+.+.....+++..|++.-+....|.+.| ++++.++|+ ++|+++|+|+++. +
T Consensus 212 ~~~~~~l~--~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~------------~~giLlI~DEV~tGf 277 (464)
T PRK06938 212 RANLHYLE--NLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE------------EAGIPLIVDEIQSGF 277 (464)
T ss_pred HHHHHHHH--HHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH------------HcCCEEEEeccccCC
Confidence 01244555 444321111136788888888887788877 335555555 4999999999986 3
Q ss_pred CCCC----CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCC
Q 010538 255 VTQP----PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGT 330 (508)
Q Consensus 255 g~~~----~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 330 (508)
|..- .+.-....|+++++ |.+++-.-+|.++.+++. +.+.+...++ ...
T Consensus 278 GRtG~~~a~e~~gv~PDiv~~g--KglggG~PlsAv~~~~~~-~~~~~~~~~~------------------------T~~ 330 (464)
T PRK06938 278 GRTGKMFAFEHAGIIPDVVVLS--KAIGGSLPLAVVVYREWL-DTWQPGAHAG------------------------TFR 330 (464)
T ss_pred CcCcHHHHHHhcCCCCCEEEee--ccccCCCceEEEeehhHh-hccCCCCCCC------------------------CCC
Confidence 3211 11112247999997 966631227888888764 3332211110 012
Q ss_pred CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC
Q 010538 331 ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS 410 (508)
Q Consensus 331 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 410 (508)
-|..+.++..+.++.+.+ +++.++.+++.++|.+.|+++.. ...++..-.. .+.++.+.+......
T Consensus 331 gnpla~Aaa~a~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~-----~~~~i~~VrG------~Glm~gie~~~~~~~ 396 (464)
T PRK06938 331 GNQMAMAAGSATLRYIKE---HRLAEHAAAMGERLREHLRQLQR-----DYPQLGDVRG------RGLMLGVEIVDPQGE 396 (464)
T ss_pred cCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHH-----hCCCeeeeec------cceEEEEEeccCccc
Confidence 344556666667777655 46778888899999998877521 1112222111 266777777432110
Q ss_pred ------c-cC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecC
Q 010538 411 ------W-FG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFG 480 (508)
Q Consensus 411 ------~-~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 480 (508)
. .+ ...+...+.++|+.+.++. ...+.+|+.+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-------------------------------------~~~~~l~~~Pp 439 (464)
T PRK06938 397 PDALGHPPANGELASLIQRECLRRGLILELGG-------------------------------------RHGSVVRFLPP 439 (464)
T ss_pred ccccccCCccHHHHHHHHHHHHHCCeEEeecC-------------------------------------CCCCEEEEECC
Confidence 0 00 1345667778999986521 01468999999
Q ss_pred CCCCHHHHHHHHHhhhhhhhh
Q 010538 481 YMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 481 ~~~t~eev~~l~~~~~~~~~~ 501 (508)
+-.|++|++++++++.+.+..
T Consensus 440 l~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 440 LIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred CccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999887653
No 370
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.26 E-value=2.5e-09 Score=113.17 Aligned_cols=353 Identities=12% Similarity=0.079 Sum_probs=188.8
Q ss_pred CCCeeeeCCC------CCCCCHHHHH--HHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-CCCCCceEEEc
Q 010538 39 NGTVYLDHAG------ATLYSELQME--AIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN-ASMKDYKCIFT 109 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~--a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-~~~~~~~i~~t 109 (508)
++.-|+|..+ .|--+|.+++ ++.+++..-.+..+..... ......++-++++++.+ -..+ .+.|+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~----~~~~~~~la~~l~~~~~p~~~~--~v~f~ 116 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDV----YTVEMARFVDTFARVLGDPELP--HLFFV 116 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCc----CCHHHHHHHHHHHhhcCCCCCC--EEEEe
Confidence 5778888643 3555888888 7655442211111111101 12233345556666653 2234 79999
Q ss_pred CChHHHHHHHHhhcC-C-------C-----CCCeEEEecccc-cchHHHHHHHHh----cC-CeE---EEEccCC-ccCc
Q 010538 110 SGATAALKLVGEAFP-W-------S-----HQSSYMYTMENH-NSVLGIREYALS----QG-AAA---FAIDVEE-AVDN 166 (508)
Q Consensus 110 ~g~t~al~~~~~~l~-~-------~-----~g~~vl~~~~~h-~s~~~~~~~~~~----~G-~~v---~~v~~~~-~~~~ 166 (508)
+|+++|+..++.... . + ...+||.....| ............ .. ... ..+|... ....
T Consensus 117 ~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (443)
T PRK08297 117 DGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPL 196 (443)
T ss_pred CchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCC
Confidence 999999988776541 1 1 124576665444 333322221100 00 000 0011000 0000
Q ss_pred -c-ccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCC
Q 010538 167 -D-GLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 167 -~-~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~ 240 (508)
. ..++ ....-.-++++++ +.+.+ ..+++..|++.-+....|.+.| ++++.++|++
T Consensus 197 ~~~~~~~---~~~~~~~~~~~~~--~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~----------- 257 (443)
T PRK08297 197 PGEDLEE---VEALEAEALAQAR--AAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDE----------- 257 (443)
T ss_pred cccccch---hhHHHHHHHHHHH--HHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHH-----------
Confidence 0 0000 0000001234444 34422 2467899999888888888755 4455555555
Q ss_pred CCCeEEEEecccc-CCCCCC----CCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhh
Q 010538 241 KGRWMVLIDAAKG-CVTQPP----DLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDF 315 (508)
Q Consensus 241 ~~g~~vivD~a~~-~g~~~~----d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 315 (508)
+|+++|+|+++. +|.... +......|+++++ |.++ + |.+++.++..+.....+.+
T Consensus 258 -~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~-~---~a~l~~~~i~~~~~~~~~~------------- 317 (443)
T PRK08297 258 -HDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFG--KKTQ-V---CGIMAGRRVDEVEDNVFAV------------- 317 (443)
T ss_pred -cCCEEEEechhhccCccchHHHHHhcCCCCCEEEec--cccc-c---cceecchHHHHhhhhhccC-------------
Confidence 999999999985 444311 0112247999865 9764 3 3344444432211111100
Q ss_pred hhhccCccccccCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE--EEecCCCCCc
Q 010538 316 VKRRQGVEELFEDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC--TIYGTYTSEV 391 (508)
Q Consensus 316 ~~~~~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~--~~~~~~~~~~ 391 (508)
.....+| .|....++..++++.+.+ +++.+++.++.++|.+.|+++.. ..+.+ .+. +
T Consensus 318 --------~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~--~~~~~~~~vr---g--- 378 (443)
T PRK08297 318 --------SSRINSTWGGNLVDMVRARRILEVIEE---DGLVENAARQGEYLLARLEELAA--EFPAVVSNVR---G--- 378 (443)
T ss_pred --------ccccCCCCCccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH--HCCCcceeee---c---
Confidence 0011233 345556666667777655 35677888888888888876521 00111 111 1
Q ss_pred ccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCC
Q 010538 392 SYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKP 471 (508)
Q Consensus 392 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 471 (508)
.+.++.+.+.+.. ....+.+.+.++||.+.++.
T Consensus 379 ----~G~~~~i~~~~~~----~~~~~~~~l~~~Gvl~~~~~--------------------------------------- 411 (443)
T PRK08297 379 ----RGLMCAFDLPTTA----DRDEVIRRLWEEGVLVLPCG--------------------------------------- 411 (443)
T ss_pred ----cceEEEEEecCHH----HHHHHHHHHHHCCEEEecCC---------------------------------------
Confidence 2678888875421 12347777888999986521
Q ss_pred CceEEEecCCCCCHHHHHHHHHhhhhhhhhh
Q 010538 472 TGAIRVSFGYMSTFEDAKVNRCSSFDFVNFS 502 (508)
Q Consensus 472 ~~~iRis~~~~~t~eev~~l~~~~~~~~~~~ 502 (508)
...+|+++.+.+|++|++.+++++.+.++.+
T Consensus 412 ~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999999887644
No 371
>PRK06148 hypothetical protein; Provisional
Probab=99.23 E-value=4.8e-09 Score=121.19 Aligned_cols=358 Identities=16% Similarity=0.130 Sum_probs=202.1
Q ss_pred CCCeeeeCC----CCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHH
Q 010538 39 NGTVYLDHA----GATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATA 114 (508)
Q Consensus 39 ~~~iyld~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~ 114 (508)
++.-|+|.. ..|--+|.+++++.+++. .. +.+..+ ......++-+++++.+....+ .+.|++++|+
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~-~l--~~~~~~-----~~~~~~~lAe~L~~~~p~~~~--~v~f~nSGsE 691 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAA-RL--NTNTRY-----LHDAIVAYAERLTATLPDGLT--VAFFVNSGSE 691 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHh-hc--CCcCCc-----CCHHHHHHHHHHHHhCCCCcC--EEEEeCCcHH
Confidence 678899973 345558889888766543 22 122211 122344556666676654445 7899999999
Q ss_pred HHHHHHhhcC-CCCCCeEEEeccc-ccchHHHHHHH-----HhcC----CeEEEEccCC--ccCcccccccccccccccc
Q 010538 115 ALKLVGEAFP-WSHQSSYMYTMEN-HNSVLGIREYA-----LSQG----AAAFAIDVEE--AVDNDGLSESLVTSTKISL 181 (508)
Q Consensus 115 al~~~~~~l~-~~~g~~vl~~~~~-h~s~~~~~~~~-----~~~G----~~v~~v~~~~--~~~~~~l~~~~~~~~~~~~ 181 (508)
|+..++.... ..+...||+.... |.......... ...+ ..+..++... ......- + ......
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~-~~~~~~--- 766 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWP-D-AEHGRR--- 766 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCC-h-hhhHHH---
Confidence 9988776542 2344566665443 33332222110 0001 1111111110 0000000 0 000000
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecccc-CCC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKG-CVT 256 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~-~g~ 256 (508)
..+.++ +.++.-....+++..|++..+....|.+.| ++++.++|++ +|+++|.|++|. +|.
T Consensus 767 ~~~~l~--~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~------------~g~llI~DEVqtGfGR 832 (1013)
T PRK06148 767 FAESVA--EQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRA------------AGGVCIADEVQVGFGR 832 (1013)
T ss_pred HHHHHH--HHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH------------hCCEEEEEecccCCCC
Confidence 012222 222100112356888999888888898888 5666666766 999999999985 443
Q ss_pred CC---CCC--CCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 257 QP---PDL--SKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 257 ~~---~d~--~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
.- .-. .....|+++++ |.+|+-.-+|.+++++++.+.+.+-. . .+....-
T Consensus 833 tG~~~~a~e~~gv~PDivt~g--K~lggG~Plgav~~~~ei~~~~~~g~---~--------------------~~~Tf~g 887 (1013)
T PRK06148 833 VGSHWWAFETQGVVPDIVTMG--KPIGNGHPMGAVVTTREIADSFDNGM---E--------------------YFNTFGG 887 (1013)
T ss_pred CCCcchhhhhcCCCcceeeec--ccccCCcceEEEEEcHHHHhhccCCC---c--------------------cccCCCC
Confidence 22 111 12247998886 97663122899999988876554210 0 0001123
Q ss_pred ChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC-C
Q 010538 332 SFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG-S 410 (508)
Q Consensus 332 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 410 (508)
|..+.++..++++.+.+ +++.++..++.++|++.|+++.. ...+++.-.. .+.++.+.+...+. .
T Consensus 888 npla~aaa~a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~-----~~~~i~~VrG------~Gl~~gvel~~~~~~~ 953 (1013)
T PRK06148 888 NPVSCAIGLAVLDIIED---EDLQRNALEIGNYLLAGLRELQD-----RFDIIGDVRG------MGLFLGIELVTDRKTK 953 (1013)
T ss_pred CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHH-----hCCCceEEee------eceEEEEEecCCcccc
Confidence 45556666667887765 46778888999999998877521 1112221111 25666777643111 1
Q ss_pred ccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHH
Q 010538 411 WFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFED 487 (508)
Q Consensus 411 ~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ee 487 (508)
..+ ...+...+.++||.+.+. .+ ..+.+|+.+..-.|++|
T Consensus 954 ~~~~~~~~~i~~~~~~~Gvl~~~~---g~----------------------------------~~~vlr~~Ppl~it~~~ 996 (1013)
T PRK06148 954 APATAIARYVKNGARERGILIGTE---GP----------------------------------HDNVLKIRPPLIFSRAD 996 (1013)
T ss_pred CccHHHHHHHHHHHHhCCeEEecc---CC----------------------------------CCCEEEEeCCccCCHHH
Confidence 111 234677778899998652 00 15789999999999999
Q ss_pred HHHHHHhhhhhhhh
Q 010538 488 AKVNRCSSFDFVNF 501 (508)
Q Consensus 488 v~~l~~~~~~~~~~ 501 (508)
+|++++.+.+.+..
T Consensus 997 id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 997 ADHLLEVLDDVLAA 1010 (1013)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 372
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=4.4e-09 Score=102.07 Aligned_cols=337 Identities=13% Similarity=0.070 Sum_probs=212.3
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|||+-+ .+..+|.+++++.+++. ...- .. .....+...+..+.+.++++.+ .|+-++.+
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~-kLtl-ss-----rafYnd~~~~f~~~vt~lf~~~----kvlpmnTG 125 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQAD-KLTL-SS-----RAFYNDVLGEFAEYVTKLFGYD----KVLPMNTG 125 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHh-Hhhh-hh-----HHHhhhhHHHHHHHHHHhcCcc----eeeecccc
Confidence 6788998743 45568899988876553 2110 01 1123566777888999999986 45666666
Q ss_pred HHHHHHHHhhcC-----C---CCCCeEEEe-cccccc-hHHHHH------HHHhcC----CeEEEEccCCccCccccccc
Q 010538 113 TAALKLVGEAFP-----W---SHQSSYMYT-MENHNS-VLGIRE------YALSQG----AAAFAIDVEEAVDNDGLSES 172 (508)
Q Consensus 113 t~al~~~~~~l~-----~---~~g~~vl~~-~~~h~s-~~~~~~------~~~~~G----~~v~~v~~~~~~~~~~l~~~ 172 (508)
.+|...++.... . +.+..++++ ..++-+ ....+. ....+| ..+..||.+
T Consensus 126 aEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~----------- 194 (427)
T KOG1402|consen 126 AEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG----------- 194 (427)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----------
Confidence 888877664432 1 223334433 322211 111000 001111 112233332
Q ss_pred cccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccc
Q 010538 173 LVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAK 252 (508)
Q Consensus 173 ~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~ 252 (508)
|.++++ .+|+ +++.+.+++.-.+-.-|.+.|....-+-+++ ||.+|++++|.|..|
T Consensus 195 ---------d~eale--~~l~-----~~~vaaFivEPIQGEaGVvvP~~GYL~~vre--------LCtkynvl~I~DEvQ 250 (427)
T KOG1402|consen 195 ---------DAEALE--VALK-----SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRE--------LCTKYNVLLIADEVQ 250 (427)
T ss_pred ---------CHHHHH--HHhc-----CCCeeEEEeeccccccceEeCCchhHHHHHH--------HHHhhcEEEEehhhh
Confidence 356666 5553 5788999999999999999995544444443 444599999999999
Q ss_pred cCCC-----CCCCCCCCCCcEEEEecccccc-CCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccc
Q 010538 253 GCVT-----QPPDLSKYPVDFVVMSFYKIFG-YPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELF 326 (508)
Q Consensus 253 ~~g~-----~~~d~~~~~~D~~~~S~~K~~g-~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 326 (508)
+.-. ...|......|++... |.++ |..-+..++.+++..-.++|-.+|..
T Consensus 251 TGl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~im~~~~pgeHgsT---------------------- 306 (427)
T KOG1402|consen 251 TGLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADDDIMLNIKPGEHGST---------------------- 306 (427)
T ss_pred hcccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHHHHhccCCCccccc----------------------
Confidence 7521 2334455568999887 8665 22226778888888655565533221
Q ss_pred cCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceE-EEecCCCCCcccCCCCceEEEEee
Q 010538 327 EDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVC-TIYGTYTSEVSYHDTGSMVSFNLK 405 (508)
Q Consensus 327 ~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 405 (508)
.| -|+.+.....++++.+.+ +.+.++..+|...|+..|.+++. .+ .++..-.. ++-+..+.+.
T Consensus 307 -yg-gNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~-----~~p~~v~~VRG------rGl~~ai~i~ 370 (427)
T KOG1402|consen 307 -YG-GNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQK-----KFPHVVKEVRG------RGLLNAIVIN 370 (427)
T ss_pred -cC-CChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccc-----cccchhheeec------cceEEEEEec
Confidence 11 244555666678998876 78899999999999999998842 11 11222211 2555555554
Q ss_pred CCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCH
Q 010538 406 RPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTF 485 (508)
Q Consensus 406 ~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 485 (508)
..+....+..++.-.++++|....+.+ .+.||+++-.-.++
T Consensus 371 ~~~~~~~~aw~~cl~lk~~g~LAkptH---------------------------------------~~IiRfaPPL~I~e 411 (427)
T KOG1402|consen 371 PSKTSGQDAWDVCLALKENGLLAKPTH---------------------------------------GNIIRFAPPLVISE 411 (427)
T ss_pred cccccchhHHHHHHcccccccccCCCC---------------------------------------CCeEEecCCcccCH
Confidence 333333456678888889999876642 56899999999999
Q ss_pred HHHHHHHHhhhhhhh
Q 010538 486 EDAKVNRCSSFDFVN 500 (508)
Q Consensus 486 eev~~l~~~~~~~~~ 500 (508)
+|++.-++++.+.+.
T Consensus 412 ~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 412 EDLREGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987664
No 373
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=3.9e-10 Score=111.51 Aligned_cols=333 Identities=15% Similarity=0.084 Sum_probs=194.8
Q ss_pred CchHHHHHHhhccCCCCCeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-----
Q 010538 24 KSIDQIRATEFKRLENGTVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN----- 98 (508)
Q Consensus 24 ~~~~~~r~~~f~~~~~~~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~----- 98 (508)
+.+..+|+ -...+ ...--||.+. .|..+++.. ..++...-+ ... ++..++.++-+|+.+|+++.
T Consensus 64 ~PiTF~RQ-vlal~-~~p~lLd~~~---fp~Dai~RA-~~~L~~~gG-s~G----aYS~SqGv~~vR~~VA~~I~rRDG~ 132 (475)
T KOG0258|consen 64 KPITFLRQ-VLALC-QYPELLDSPE---FPTDAIKRA-KRILNDCGG-SLG----AYSDSQGVPGVRKHVAEFIERRDGI 132 (475)
T ss_pred CChhHHHH-HHHHh-cChhhcCCCC---CCHHHHHHH-HHHHHhcCC-ccc----ccccccCChhHHHHHHHHHHhccCC
Confidence 45667776 54333 2333455443 577777665 445543222 111 22234557778888888875
Q ss_pred -CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCcccccccccccc
Q 010538 99 -ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTST 177 (508)
Q Consensus 99 -~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~ 177 (508)
++|+ +|.+|.|++.|+..++..+...+.+-|+++...||=+.+.+... |...+..-+++...+
T Consensus 133 p~~p~--dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~---~~~~v~YyLdEe~~W----------- 196 (475)
T KOG0258|consen 133 PADPE--DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLL---GGTQVPYYLDEESNW----------- 196 (475)
T ss_pred CCCHH--HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHh---CCcccceeeccccCC-----------
Confidence 5666 89999999999999999886667788999999999887766554 666655556654444
Q ss_pred ccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC-
Q 010538 178 KISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT- 256 (508)
Q Consensus 178 ~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~- 256 (508)
+.|.++++ ..+++.. ..=+++++++-++-||||.++..+-|.++++ .|.+.++.++.|.++---.
T Consensus 197 --~ld~~el~--~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~---------fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 197 --SLDVAELE--RSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIIC---------FAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred --CCCHHHHH--HHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHH---------HHHHcCeEEechHHHHhhcc
Confidence 22677777 6665432 2335678888889999999999888888777 5667999999998853211
Q ss_pred ----CCCCCC-------CC---CCc-EEEEecccccc---CCCcceEEEE---echhHhhhc--------cccccCceEE
Q 010538 257 ----QPPDLS-------KY---PVD-FVVMSFYKIFG---YPTGLGALIM---RNDAAKLLK--------NTYFSGGTVA 307 (508)
Q Consensus 257 ----~~~d~~-------~~---~~D-~~~~S~~K~~g---~P~G~G~l~~---~~~~~~~l~--------~~~~g~~~~~ 307 (508)
.-.+++ .. .+- +-..|.||.+. ++.| |++=+ .++....+. |.+.|-.
T Consensus 263 ~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-GYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~--- 338 (475)
T KOG0258|consen 263 TTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-GYMESLNRDPRVKQQIKKLASIKLCPQVSGQK--- 338 (475)
T ss_pred CCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-CeeecccCChhHHHHHHHHHhhhhcCCccchh---
Confidence 111111 11 122 33447778443 2443 55543 222222111 1111100
Q ss_pred ecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 308 ASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
.... ....-.+|.+++.. +..+ .+.+.+.++..++.+.+.++++. |+....++
T Consensus 339 -------~vdl---~VnPP~Pgd~Sy~~---------~~~E--kd~il~~l~~ra~l~~~~~ns~~------gi~cn~~q 391 (475)
T KOG0258|consen 339 -------LVDL---VVNPPKPGDPSYDL---------FSSE--KDGILSSLRSRAKLTEDAFNSLE------GISCNPVQ 391 (475)
T ss_pred -------hhce---ecCCCCCCCcchhh---------hhhh--hHhHHHHHHHHhHHHHHHHhhcC------ceeeccCc
Confidence 0000 00000112222211 1111 35666777788888999999984 78887665
Q ss_pred CCCcccCCCCceEEEE---eeC-------CCCCccCHHHHHHHHhhCCCeeccCCCCCch
Q 010538 388 TSEVSYHDTGSMVSFN---LKR-------PDGSWFGYREVEKLASLSGIQLRTGCFCNPG 437 (508)
Q Consensus 388 ~~~~~~~~~~~~v~~~---~~~-------~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~ 437 (508)
+ .+-.|. ++. ..+...|..--.++|+..||.+-+|+.+...
T Consensus 392 G---------AMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~ 442 (475)
T KOG0258|consen 392 G---------AMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQK 442 (475)
T ss_pred c---------ceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCC
Confidence 3 443332 221 0111123333567888999999999977654
No 374
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.21 E-value=5.6e-09 Score=110.89 Aligned_cols=357 Identities=13% Similarity=0.091 Sum_probs=190.9
Q ss_pred CCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceE-EEcCC
Q 010538 39 NGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKC-IFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i-~~t~g 111 (508)
++.-|+|..+. +--+|.+++++.++....... ... .. ......++-+++++.+.....++.+ .++++
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~--~~~-~~---~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S 129 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL--HTL-DL---TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS 129 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccc--ccc-cc---CCHHHHHHHHHHHHhCCCccccceEEEeCCC
Confidence 67889998443 555888888876654221100 111 00 1233445566667776432111124 55589
Q ss_pred hHHHHHHHHhhcC-CCCCCeEEEecccccch-HHHHHHHHh------c---CCeEEEEccCCccCccccccccccccccc
Q 010538 112 ATAALKLVGEAFP-WSHQSSYMYTMENHNSV-LGIREYALS------Q---GAAAFAIDVEEAVDNDGLSESLVTSTKIS 180 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~~g~~vl~~~~~h~s~-~~~~~~~~~------~---G~~v~~v~~~~~~~~~~l~~~~~~~~~~~ 180 (508)
+++|+..++.... ..+...||.....|-.. ......... . ...+..+|........ + .....
T Consensus 130 GsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~ 202 (459)
T PRK06931 130 GADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCP-L------GIGGE 202 (459)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcccccc-c------cCCch
Confidence 9999988776432 34456677665444333 333222100 0 1123334432110000 0 00000
Q ss_pred cchhh----hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccc
Q 010538 181 LLPIQ----RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAK 252 (508)
Q Consensus 181 ~d~~~----l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~ 252 (508)
.+.+. ++ +.+++.....+++..|++.-+....|.+.| ++.+.++|++ +|+++|+|+++
T Consensus 203 ~~~~~~~~~~~--~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~------------~g~LlI~DEV~ 268 (459)
T PRK06931 203 AGVKALTYYFE--NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK------------HGILLIVDEVQ 268 (459)
T ss_pred hHHHHHHHHHH--HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH------------cCCEEEEecch
Confidence 01111 11 111100011345788888878888888877 3455555554 99999999998
Q ss_pred c-CCCCC----CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCcccccc
Q 010538 253 G-CVTQP----PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFE 327 (508)
Q Consensus 253 ~-~g~~~----~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (508)
. +|..- .+......|+++++ |.+++-.-+|.+..+++. +.+.+...++
T Consensus 269 tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~~~-~~~~~~~~~~------------------------ 321 (459)
T PRK06931 269 AGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKKEF-DAWQPGGHTG------------------------ 321 (459)
T ss_pred hcCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHHHH-hhccCCCCCC------------------------
Confidence 6 33211 11112247999887 966521126777777653 4333211110
Q ss_pred CCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCC
Q 010538 328 DGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRP 407 (508)
Q Consensus 328 ~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 407 (508)
..+-|..+.++..+.++.+.+. .+.++..++.++|.+.|+++.. ...++..-.. .+.++.+.+...
T Consensus 322 T~~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~-----~~~~i~~vrG------~Glm~giel~~~ 387 (459)
T PRK06931 322 TFRGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQK-----RYPCIGNVRG------RGLMIGIEIVDE 387 (459)
T ss_pred CCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHH-----hCCCeEeEec------CceEEEEEEccC
Confidence 0123445566666677777653 4667888888888888876521 1111221111 267777777432
Q ss_pred CCC-------ccC---HHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 408 DGS-------WFG---YREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 408 ~~~-------~~~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
... ..+ ...+.+.+.++|+.+.++. ...+.+|+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------------------------------------~~~~~l~~ 430 (459)
T PRK06931 388 RQPADAMGSYPADGELAAAIQKACFENGLLLERGG-------------------------------------RNGNVVRL 430 (459)
T ss_pred cccccccccCCccHHHHHHHHHHHHHCCcEEeecC-------------------------------------CCCCEEEE
Confidence 110 001 1345666778999986521 01468999
Q ss_pred ecCCCCCHHHHHHHHHhhhhhhh
Q 010538 478 SFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~~~~~~ 500 (508)
.+.+-.|++|++++++++.+.+.
T Consensus 431 ~Ppl~it~~eid~~~~~l~~~l~ 453 (459)
T PRK06931 431 LPPLLITQAECEEFIDRFEQALL 453 (459)
T ss_pred ECCCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999988764
No 375
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.21 E-value=7.9e-12 Score=124.86 Aligned_cols=205 Identities=17% Similarity=0.187 Sum_probs=44.7
Q ss_pred CCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCC
Q 010538 47 AGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWS 126 (508)
Q Consensus 47 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~ 126 (508)
-+-+++++.+++++.+.. . .|.|-......+.+ ...+..+.+.++.+.|++.. +++++...|+.+++.++ .
T Consensus 13 LGRs~l~~~a~~a~~~~a-~-~Y~nLE~dl~~G~R-g~R~~~v~~ll~~ltgAeaA----~VvNnnaAAv~L~l~~l--a 83 (367)
T PF03841_consen 13 LGRSPLSEEAIEAVAEVA-S-GYSNLEYDLETGKR-GSRYAHVEELLCELTGAEAA----LVVNNNAAAVLLALNTL--A 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccc-c-cccccccccccccc-cccccccccccccccccccc----ccccccccccccccccc--c
Confidence 345566777877764422 1 12222211111211 22345677888999999865 55666667888888887 3
Q ss_pred CCCeEEEecccccchHH---HHHHHHhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCce
Q 010538 127 HQSSYMYTMENHNSVLG---IREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYN 203 (508)
Q Consensus 127 ~g~~vl~~~~~h~s~~~---~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~ 203 (508)
.|.+|+++..+-..+.. +-+.++..|+++++|-...... +++++ + +++++|.
T Consensus 84 ~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~-----------------~~Dye--~------AI~e~Ta 138 (367)
T PF03841_consen 84 KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTH-----------------LSDYE--K------AITENTA 138 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-----------------ccccc--c------ccccccc
Confidence 56788888877665544 3345677799998886644333 45567 4 4478999
Q ss_pred EEEEeCCCCCC--c--cccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-------CCC-CCCC---CCCCCcE
Q 010538 204 LFAFPSECNFS--G--SRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-------VTQ-PPDL---SKYPVDF 268 (508)
Q Consensus 204 lv~~~~~~n~t--G--~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-------g~~-~~d~---~~~~~D~ 268 (508)
++.-.|.+|.. | .-.+++++.+++|+ |++++++|...+. |.. ..++ -+.|+|+
T Consensus 139 ~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~------------~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDl 206 (367)
T PF03841_consen 139 ALLKVHTSNFRIQGFTGEVSLEELAELAKE------------HGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADL 206 (367)
T ss_dssp ----------------------HHHHHHHH------------HT--EEEE-TTHHHHHHHTT----------CCCCT-SE
T ss_pred ccccccccccccccccccccHHHHHHHHhh------------cCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCE
Confidence 99888877763 2 24589999999998 9999999987732 111 1223 3458999
Q ss_pred EEEeccccccCCCcceEEEEechhHhhhcc
Q 010538 269 VVMSFYKIFGYPTGLGALIMRNDAAKLLKN 298 (508)
Q Consensus 269 ~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~ 298 (508)
+++|+-|.+|||+ .|+++.+++++++++.
T Consensus 207 V~fSGdKlLGGPQ-aGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 207 VTFSGDKLLGGPQ-AGIIVGKKELIEKLKK 235 (367)
T ss_dssp EEEETTSSSSS-S--EEEEEEHHHHHHHHH
T ss_pred EEEECCCcCCCCC-eEEEEeCHHHHHHHhh
Confidence 9999999999998 6999999999988763
No 376
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=5.4e-09 Score=104.04 Aligned_cols=346 Identities=15% Similarity=0.109 Sum_probs=196.9
Q ss_pred chHHHHHHhhccCC-CC------CeeeeCCCCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHH-
Q 010538 25 SIDQIRATEFKRLE-NG------TVYLDHAGATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDY- 96 (508)
Q Consensus 25 ~~~~~r~~~f~~~~-~~------~iyld~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~- 96 (508)
.+..+-+ .|.... ++ =+|-|-.+-++..+.|.++- +.+.. .+....+.+ .+......+.++++
T Consensus 12 pIlgL~e-~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae-~~l~~----~~~~k~Yl~---i~G~~~f~~~~~~ll 82 (396)
T COG1448 12 PILGLKE-AFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAE-KRLLE----QEKTKNYLP---IEGLPEFLEAVQKLL 82 (396)
T ss_pred chhHHHH-HHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHH-HHhhc----cccccccCC---cCCcHHHHHHHHHHh
Confidence 4555555 555442 22 36778888888777776553 43432 222221211 12233444555554
Q ss_pred cCCCCC---CceE--EEcCChHHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCc-cCcccc
Q 010538 97 FNASMK---DYKC--IFTSGATAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEA-VDNDGL 169 (508)
Q Consensus 97 ~~~~~~---~~~i--~~t~g~t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~-~~~~~l 169 (508)
||.+.. .-.+ +=|.|+|.|+.+...-+. ..++..|-+++..-++...+ .+..|.+|...|..+. ....
T Consensus 83 FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I---f~~aGl~v~~Y~Yyd~~~~~~-- 157 (396)
T COG1448 83 FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAI---FEAAGLEVETYPYYDAETKGL-- 157 (396)
T ss_pred cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH---HHhcCCceeeeeccccccccc--
Confidence 553311 0022 456899999988877663 34556688888665555544 4456999999987542 2111
Q ss_pred ccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 170 SESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
|.+.+. +.|++ ..++.-++.=..+|||||.-++.++..++++ +.++.+++.++|
T Consensus 158 ------------df~~ml--a~L~~---a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~---------~~~~r~lip~~D 211 (396)
T COG1448 158 ------------DFDGML--ADLKT---APEGSVVLLHGCCHNPTGIDPTEEQWQELAD---------LIKERGLIPFFD 211 (396)
T ss_pred ------------cHHHHH--HHHHh---CCCCCEEEEecCCCCCCCCCCCHHHHHHHHH---------HHHHcCCeeeee
Confidence 344443 33321 1223233333677999999999987776666 344589999999
Q ss_pred ccc-cCCCCCCCCC--------CCCC-cEEEEeccccccCCCc--ceEEEEec---hhHhhhccccccCceEEecccchh
Q 010538 250 AAK-GCVTQPPDLS--------KYPV-DFVVMSFYKIFGYPTG--LGALIMRN---DAAKLLKNTYFSGGTVAASIADID 314 (508)
Q Consensus 250 ~a~-~~g~~~~d~~--------~~~~-D~~~~S~~K~~g~P~G--~G~l~~~~---~~~~~l~~~~~g~~~~~~~~~~~~ 314 (508)
-|+ +++.- ++-. +.+. -+++.|++|.|| .+| +|.+.+-- +...++...+.
T Consensus 212 ~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfg-LYgERVGa~~vva~~~~~a~~v~sqlk------------- 276 (396)
T COG1448 212 IAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFG-LYGERVGALSVVAEDAEEADRVLSQLK------------- 276 (396)
T ss_pred hhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhh-hhhhccceeEEEeCCHHHHHHHHHHHH-------------
Confidence 764 44332 3211 1122 478889999999 877 77766532 22211111100
Q ss_pred hhhhccCccccccCCCCChhHHHHHHHH-----H--HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 315 FVKRRQGVEELFEDGTASFLSIASIRHG-----F--NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 315 ~~~~~~~~~~~~~~gt~~~~~~~~l~~a-----l--~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
. .-|....+|+-.+......- | +|..+ +..+++|+.++++.|++.|++... ...+..+..+
T Consensus 277 ------~-~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~E--l~~Mr~Ri~~mR~~lv~~L~~~~~---~~~f~~i~~Q 344 (396)
T COG1448 277 ------A-IIRTNYSNPPAHGAAVVATILNNPELRAEWEQE--LEEMRQRILEMRQALVDALKALGA---PRNFDFIISQ 344 (396)
T ss_pred ------H-HHHhccCCCchhhHHHHHHHhCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhCC---CcccchHhhc
Confidence 0 11112233333322222111 2 34334 789999999999999999988420 1235555443
Q ss_pred CCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCcccc
Q 010538 388 TSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDII 467 (508)
Q Consensus 388 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 467 (508)
.+|.++. + ++...+.++.+++||.+..
T Consensus 345 ---------~GMFsy~--G-----ls~~QV~rLree~~IY~v~------------------------------------- 371 (396)
T COG1448 345 ---------RGMFSYT--G-----LSPEQVDRLREEFGIYLVA------------------------------------- 371 (396)
T ss_pred ---------CceeecC--C-----CCHHHHHHHHHhccEEEec-------------------------------------
Confidence 4555444 3 4445688888889999754
Q ss_pred CCCCCceEEEecCCCCCHHHHHHHHHhhhh
Q 010538 468 HGKPTGAIRVSFGYMSTFEDAKVNRCSSFD 497 (508)
Q Consensus 468 ~~~~~~~iRis~~~~~t~eev~~l~~~~~~ 497 (508)
.| ||++... |...|+++.+.+.+
T Consensus 372 ----sG--Ri~vaGl-~~~ni~~va~ai~~ 394 (396)
T COG1448 372 ----SG--RINVAGL-NTSNIDYVAKAIAA 394 (396)
T ss_pred ----CC--eeeeccC-ChhhHHHHHHHHHh
Confidence 23 8887753 67889999888765
No 377
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.06 E-value=1.1e-08 Score=101.38 Aligned_cols=179 Identities=13% Similarity=0.065 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEc--CChHHHHHHHHhhcCCCCCCeEEEecccccchHH-HHH-------HHHhcCCeE
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFT--SGATAALKLVGEAFPWSHQSSYMYTMENHNSVLG-IRE-------YALSQGAAA 155 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t--~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~-~~~-------~~~~~G~~v 155 (508)
.+.+.+..|+.|+++.. ++=. -|+|+|+.+++.++ +++||+++.....-...+. .+. .++.+|++.
T Consensus 56 Rd~le~iyA~vfgaE~A---LVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y 131 (403)
T PF06838_consen 56 RDKLERIYADVFGAEDA---LVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKY 131 (403)
T ss_dssp HHHHHHHHHHHCT-SEE---EEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EE
T ss_pred HHHHHHHHHHHhCchhh---hhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCcee
Confidence 44566778999999865 4432 48889999999999 7999999976543333222 121 134568999
Q ss_pred EEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCC-CccccCHHHHHHHHcCCcccc
Q 010538 156 FAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNF-SGSRFNLDLINIMKKNPERIL 234 (508)
Q Consensus 156 ~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~-tG~~~~i~~i~~l~~~~~~~~ 234 (508)
+.||+..++.+ |.+.++ +++ +++||+|.+.--.-. +=..+.+++|.++++.+
T Consensus 132 ~~v~L~~dg~~---------------D~~~i~--~~~------~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~v---- 184 (403)
T PF06838_consen 132 REVPLTEDGTI---------------DWEAIK--KAL------KPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFV---- 184 (403)
T ss_dssp EE--B-TTSSB----------------HHHHH--HHH------HTTEEEEEEE-S-TTSSS----HHHHHHHHHHH----
T ss_pred EEEeecCCCCc---------------CHHHHH--Hhh------ccCceEEEEecCCCCCCCCCCCHHHHHHHHHHH----
Confidence 99999988888 688888 444 578999998643211 11234455555554310
Q ss_pred ccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccC---CCcceEEEEechhHhhhccc
Q 010538 235 EISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGY---PTGLGALIMRNDAAKLLKNT 299 (508)
Q Consensus 235 ~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~---P~G~G~l~~~~~~~~~l~~~ 299 (508)
-..+.+++++||.+++--.......+.++|++++|+=|..|| |+| |++..+++++++....
T Consensus 185 ---k~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiAptG-GYIaGr~~lVe~~a~R 248 (403)
T PF06838_consen 185 ---KEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPTG-GYIAGRKDLVERAAYR 248 (403)
T ss_dssp ---HHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHHHHHHH
T ss_pred ---HhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCcC-CEEechHHHHHHHHhh
Confidence 012379999999999987777777788999999999996552 666 9999999998876543
No 378
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.03 E-value=1.6e-09 Score=109.37 Aligned_cols=310 Identities=12% Similarity=0.008 Sum_probs=169.2
Q ss_pred HHHHHHHHcCCCCCCceEEEcCChHH-HHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCc
Q 010538 89 AREQVLDYFNASMKDYKCIFTSGATA-ALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDN 166 (508)
Q Consensus 89 ~r~~la~~~~~~~~~~~i~~t~g~t~-al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~ 166 (508)
....+-+.+|+.... ..++++-+|. .+.+.+.++. -+.++.|+.+..+|.|.+..+..+ |.+++.||....++.
T Consensus 61 l~~d~~~~~G~~~~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~A---Gl~~~vV~~~~~~d~ 136 (389)
T PF05889_consen 61 LVLDALRLAGLRSVK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERA---GLEPVVVENVLEGDE 136 (389)
T ss_dssp HHHHHHHHTTHTTHC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHT---T-EEEEE-EEEETTE
T ss_pred HHHHHHHHcCCcccc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhc---CCeEEEeeccCCCCe
Confidence 334445567776431 4566666653 4555566653 235688999999998877665554 999999985432211
Q ss_pred cccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC-HHHHHHHHcCCccccccCCCCCCCeE
Q 010538 167 DGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN-LDLINIMKKNPERILEISPFSKGRWM 245 (508)
Q Consensus 167 ~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~-i~~i~~l~~~~~~~~~~~~~~~~g~~ 245 (508)
+.-|.+.++ +.+++ .++...+.++++.+-..|..-| +++|+++|++ +|++
T Consensus 137 ------------l~td~~~ie--~~i~~---~G~~~iLcvltttscfapr~~D~i~~IakiC~~------------~~IP 187 (389)
T PF05889_consen 137 ------------LITDLEAIE--AKIEE---LGADNILCVLTTTSCFAPRLPDDIEEIAKICKE------------YDIP 187 (389)
T ss_dssp ------------EEEHHHHHH--HHHHH---HCGGGEEEEEEESSTTTTB----HHHHHHHHHH------------HT--
T ss_pred ------------eeccHHHHH--HHHHH---hCCCCeEEEEEecCccCCCCCccHHHHHHHHHH------------cCCc
Confidence 111455565 44422 2456688888999999999999 9999999998 9999
Q ss_pred EEEeccccC---------------CCCCCCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecc
Q 010538 246 VLIDAAKGC---------------VTQPPDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASI 310 (508)
Q Consensus 246 vivD~a~~~---------------g~~~~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 310 (508)
.++.+|+++ |..|..++..+.||++.++||..+++ .+..+..+...|.|-.
T Consensus 188 hlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~--------~~~~i~~vs~~YpGRa------ 253 (389)
T PF05889_consen 188 HLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASF--------DPSGILAVSKEYPGRA------ 253 (389)
T ss_dssp EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEES--------SHHHHHHHHHTSHSHB------
T ss_pred eEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEec--------CHHHHHHHHHHhhhhh------
Confidence 999999999 87766666666666666666644423 2344444444433211
Q ss_pred cchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCC
Q 010538 311 ADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSE 390 (508)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~ 390 (508)
..+| ..-+-..+..+...|+......-.++-.++.++|+++... -+-++...+.
T Consensus 254 -----------------s~sp----~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee---~~e~ll~~p~-- 307 (389)
T PF05889_consen 254 -----------------SASP----SLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEE---VGERLLETPR-- 307 (389)
T ss_dssp -----------------TSHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTEEBSSSTT--
T ss_pred -----------------hccc----chHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhhcCCCC--
Confidence 0111 1112233444444455666666666666666666543210 1233332221
Q ss_pred cccCCCCceEEEEeeCCCCCc-cCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCC
Q 010538 391 VSYHDTGSMVSFNLKRPDGSW-FGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHG 469 (508)
Q Consensus 391 ~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 469 (508)
..-.+.|.++...... -+...+...|..+||.=.-+..+..... -.|. ..
T Consensus 308 -----N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~----------------tsh~--------~~ 358 (389)
T PF05889_consen 308 -----NHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQ----------------TSHS--------SN 358 (389)
T ss_dssp ------SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEE----------------ETTS--------S-
T ss_pred -----CCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcc----------------cccC--------CC
Confidence 1344555555432211 0124588899888765111110110000 0010 11
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 470 KPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 470 ~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+...++-++-.+-.+.||||.+++.|+++++
T Consensus 359 yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 359 YPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp -SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 2357899988888999999999999998874
No 379
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=3.4e-08 Score=98.08 Aligned_cols=307 Identities=14% Similarity=0.132 Sum_probs=185.8
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc
Q 010538 81 ATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV 160 (508)
Q Consensus 81 ~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~ 160 (508)
.+.+..-+..+.+|+++|++.. |+...|-+ ++..++-++ .+.||.|++...-+-.+...++.. .-.+.....
T Consensus 136 Gt~DvHldlE~~iakF~G~E~a---ivYs~gF~-ti~S~ipaf-sKrGDIi~~de~~nfaIq~GlqlS---RS~i~~Fkh 207 (467)
T KOG1358|consen 136 GTIDVHLDLEKRIAKFMGTEDA---IVYSYGFS-TIESAIPAF-SKRGDIIFVDEAVNFAIQKGLQLS---RSTISYFKH 207 (467)
T ss_pred ccceeecccHHHHHHhhCCcce---eeeccccc-hhhhcchhh-hccCcEEEEehhhhHHHHHHHhhh---hheeEEecC
Confidence 3456666788999999999876 77777665 677788888 577899988875554444444433 334444444
Q ss_pred CCccCccccccccccccccccchhhhhcCCCCCCC---CCCCC---C-ceEEEEeCCCCCCccccCHHHHHHHHcCCccc
Q 010538 161 EEAVDNDGLSESLVTSTKISLLPIQRRKGASFPER---DPAGD---A-YNLFAFPSECNFSGSRFNLDLINIMKKNPERI 233 (508)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~---~~~~~---~-t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~ 233 (508)
++..++ + ..+.+. ...++ . -+.+++.-..-++|.+.|+.+|.++..+
T Consensus 208 ndm~~l--------------------e--rll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~K---- 261 (467)
T KOG1358|consen 208 NDMEDL--------------------E--RLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNK---- 261 (467)
T ss_pred CCHHHH--------------------H--HhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhh----
Confidence 332211 1 111100 01111 2 3566777788889999999999999997
Q ss_pred cccCCCCCCCeEEEEeccccCCCCC---------CCCCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCc
Q 010538 234 LEISPFSKGRWMVLIDAAKGCVTQP---------PDLSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGG 304 (508)
Q Consensus 234 ~~~~~~~~~g~~vivD~a~~~g~~~---------~d~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~ 304 (508)
+...+++|...++|... +.+.--.+|++++|..-.++ -.| |++.+ +.++-..++. ++.
T Consensus 262 --------yk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala-s~G-gFc~G-~~~i~~hQrL--Sg~ 328 (467)
T KOG1358|consen 262 --------YKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA-SGG-GFCAG-KSFIADHQRL--SGS 328 (467)
T ss_pred --------heEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc-ccC-ceeec-ceeeEeeeec--ccc
Confidence 89999999998775432 22332358999999887777 333 55554 4333222322 111
Q ss_pred eEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q 010538 305 TVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIY 384 (508)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~ 384 (508)
.+-|....|+....+ ...++..+.+. ..+.+.++.....+...|+... ++.+.
T Consensus 329 ------------------~Y~fSAslPp~la~a-a~~ai~i~~~~--p~~~~~L~~k~~~~H~~l~~~s------~~~v~ 381 (467)
T KOG1358|consen 329 ------------------GYCFSASLPPYLAGA-AIKAILIEEWN--PEIVQPLRAKVAKFHAALSSNS------GFIVS 381 (467)
T ss_pred ------------------ceeeeccCchhhhhh-HHHHHHHHhhC--cchhhhhhccccccchhhhcCC------ceEEe
Confidence 222334445544333 33466655543 3466777777788888887763 67777
Q ss_pred cCCCCCcccCCCCceEEEEeeCCCCCccCH-----HHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCc
Q 010538 385 GTYTSEVSYHDTGSMVSFNLKRPDGSWFGY-----REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHV 459 (508)
Q Consensus 385 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 459 (508)
+.+. ++++.+.+.+..+..=+. ..+.+.+.+ |+.+... ..++..+.
T Consensus 382 ~~~~--------SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a-----------------~~~~~~e~--- 432 (467)
T KOG1358|consen 382 GSPE--------SPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRA-----------------KYLEKLER--- 432 (467)
T ss_pred cCcC--------CceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhh-----------------hhhhhccc---
Confidence 7654 799888887643321000 112223333 5555432 11111111
Q ss_pred cCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 460 CWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 460 ~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
| ..+..+||++..-.++||++++...+++..
T Consensus 433 ~---------~~~pSiri~~~a~~seeel~ra~~~ik~~~ 463 (467)
T KOG1358|consen 433 C---------PIPPSIRICVSAGMSEEELERAAELIKEVA 463 (467)
T ss_pred C---------CCCCcEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 1 124579999999999999999999988653
No 380
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.02 E-value=3e-08 Score=98.55 Aligned_cols=354 Identities=14% Similarity=0.098 Sum_probs=199.9
Q ss_pred hccCCCCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEE
Q 010538 34 FKRLENGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCI 107 (508)
Q Consensus 34 f~~~~~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~ 107 (508)
|-..+++..|||.-+ .+-.+|.++.++.++. ...|.... .+ ...-..+.-+.++..+-.+-. .+.
T Consensus 43 ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl-~~l~H~t~-~~-----~~~pi~~~Ae~L~s~~P~~l~--~vf 113 (442)
T KOG1404|consen 43 YLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQL-KKLYHTTS-GY-----LNPPIHDLAEALVSKLPGDLK--VVF 113 (442)
T ss_pred EEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhh-hhhEEeec-cc-----cCCcHHHHHHHHHHhCCCCce--EEE
Confidence 444457899999743 4556899998887765 33332111 11 111233445666677776666 789
Q ss_pred EcCChHHHHHHHHhhcC--CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC--------------ccCcccccc
Q 010538 108 FTSGATAALKLVGEAFP--WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE--------------AVDNDGLSE 171 (508)
Q Consensus 108 ~t~g~t~al~~~~~~l~--~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~--------------~~~~~~l~~ 171 (508)
|++++++|+.+++.... +..-+.|-....-|.+....+.. .|.....-+... .+.+.. +.
T Consensus 114 F~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~gl---t~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~-~~ 189 (442)
T KOG1404|consen 114 FVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGL---TGLSPWKQNFPGVASGVHHTMNPDPYRGIFGG-SN 189 (442)
T ss_pred EecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhccc---ccCCcccccCCCCCCcccccCCCCcccccCCC-Cc
Confidence 99999999988766542 22223444444455444333221 111111111110 000000 00
Q ss_pred ccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCH----HHHHHHHcCCccccccCCCCCCCeEEE
Q 010538 172 SLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNL----DLINIMKKNPERILEISPFSKGRWMVL 247 (508)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i----~~i~~l~~~~~~~~~~~~~~~~g~~vi 247 (508)
.-.....+ .++++ +.+.. ........++...++..-|.+.+. ++..++|++ +|.++|
T Consensus 190 ~~e~~d~~---a~~l~--d~i~~--~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k------------~Ggl~I 250 (442)
T KOG1404|consen 190 EEEASDRY---AKELE--DLILY--DGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRK------------RGGLFI 250 (442)
T ss_pred hhhhHHHH---HHHHH--HHHHh--cCCCceeEEEeehhccCCccccCCchHHHHHHHHHHH------------cCCEEE
Confidence 00000111 12222 22211 112346777778888888888884 455566665 999999
Q ss_pred EeccccC-CCCC--CCCCCCC--CcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCc
Q 010538 248 IDAAKGC-VTQP--PDLSKYP--VDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGV 322 (508)
Q Consensus 248 vD~a~~~-g~~~--~d~~~~~--~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (508)
.|++|+. |..- ..+...+ .|+++.+ |.+|+-.-+|.++..++...-+.......
T Consensus 251 aDEVqtGfGRtG~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~EIa~v~~~~~~~f------------------- 309 (442)
T KOG1404|consen 251 ADEVQTGFGRTGHMWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTPEIADVLNQKSSHF------------------- 309 (442)
T ss_pred ehhhhhccccccccccccccCCCccHHHHH--hhccCCCcceeeecCHHHHHHHHhccccc-------------------
Confidence 9999874 2211 1222222 4777665 97773334899999999876554432111
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEE
Q 010538 323 EELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSF 402 (508)
Q Consensus 323 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (508)
+..|..+.+..+++ +.++.+.+ ++++++..+...||.+.|.++. ....++++-.. ++-++-+
T Consensus 310 ---nTyggnP~a~avg~-aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~-----d~h~iIGdVRG------~GLm~Gv 371 (442)
T KOG1404|consen 310 ---NTYGGNPVACAVGL-AVLKVIKE---ENLQENAAEVGSYLLEKLAALK-----DKHPIIGDVRG------RGLMLGV 371 (442)
T ss_pred ---cccCCCchhHHHHH-HHHHHHHH---HhHHHHHHHHHHHHHHHHHHHh-----hcCCceeeccc------ceeEEEE
Confidence 11233333333333 46777665 7889999999999999998875 35566666543 2556666
Q ss_pred EeeCCC--CC---ccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEE
Q 010538 403 NLKRPD--GS---WFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRV 477 (508)
Q Consensus 403 ~~~~~~--~~---~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 477 (508)
.+-+-. .. +.--..+.+...++|+.+.-|. .....+||
T Consensus 372 E~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~-------------------------------------i~G~vfri 414 (442)
T KOG1404|consen 372 ELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGG-------------------------------------IHGNVFRI 414 (442)
T ss_pred EEecccCCCCCcchHHHHHHHHHHHHhCeeeeccc-------------------------------------ccceEEEe
Confidence 653221 11 1111235666778899984432 23568999
Q ss_pred ecCCCCCHHHHHHHHHhh
Q 010538 478 SFGYMSTFEDAKVNRCSS 495 (508)
Q Consensus 478 s~~~~~t~eev~~l~~~~ 495 (508)
++-.-.|.||++.+++..
T Consensus 415 aPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 415 APPLCITKEDIDFAVEYF 432 (442)
T ss_pred cCCeeccHHHHHHHHHHH
Confidence 999999999998888765
No 381
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.99 E-value=1.1e-07 Score=98.38 Aligned_cols=354 Identities=13% Similarity=0.076 Sum_probs=199.6
Q ss_pred CCCCeeeeCCCC------CCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcC-CCCCCceEEEcC
Q 010538 38 ENGTVYLDHAGA------TLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFN-ASMKDYKCIFTS 110 (508)
Q Consensus 38 ~~~~iyld~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-~~~~~~~i~~t~ 110 (508)
.++.-|||.-++ +--.+.+.+++.++...--+..+... +..-..++-++++++.. .+-+ .|.|++
T Consensus 41 ~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~------t~~Pa~~LA~~L~~~aP~~~l~--~vFf~~ 112 (449)
T COG0161 41 IDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGF------THEPAIELAEKLAELAPEGGLD--HVFFTD 112 (449)
T ss_pred CCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhccc------CCchHHHHHHHHHHhCCCCCcc--EEEEeC
Confidence 367888887543 33367777777655432111222211 12224556677888887 4466 899999
Q ss_pred ChHHHHHHHHhhcC------CCCCC-eEEEe-cccccchHHHHHH------H-HhcC---CeEEEEccCC---ccCcccc
Q 010538 111 GATAALKLVGEAFP------WSHQS-SYMYT-MENHNSVLGIREY------A-LSQG---AAAFAIDVEE---AVDNDGL 169 (508)
Q Consensus 111 g~t~al~~~~~~l~------~~~g~-~vl~~-~~~h~s~~~~~~~------~-~~~G---~~v~~v~~~~---~~~~~~l 169 (508)
|+|+|+.+++.... -++.. ++|+- ..-|.+.+..... . ...+ ..+..+|... .....+-
T Consensus 113 sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~ 192 (449)
T COG0161 113 SGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEG 192 (449)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCC
Confidence 99999988775531 22333 35544 3444443332211 1 0011 1222332211 0000000
Q ss_pred ccccccccccccchhhhhcCCCCCCCCCCC-CCceEEEEeCCCCC-CccccCHH----HHHHHHcCCccccccCCCCCCC
Q 010538 170 SESLVTSTKISLLPIQRRKGASFPERDPAG-DAYNLFAFPSECNF-SGSRFNLD----LINIMKKNPERILEISPFSKGR 243 (508)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~-~~t~lv~~~~~~n~-tG~~~~i~----~i~~l~~~~~~~~~~~~~~~~g 243 (508)
..+.....++++ +.|.+ .+ ++...+++.-+... .|.++|.+ ++.++|++ ||
T Consensus 193 ------~~~~~~~a~~le--~~i~~---~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~k------------y~ 249 (449)
T COG0161 193 ------DEEFAEAADELE--ALILE---HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDK------------YG 249 (449)
T ss_pred ------hHHHHHHHHHHH--HHHHh---cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHH------------cC
Confidence 000012355666 55533 24 56677777666665 88888844 66666665 99
Q ss_pred eEEEEecccc-CCC-------CCCCCCCCCCcEEEEeccccccCC-CcceEEEEechhHhhhccccccCceEEecccchh
Q 010538 244 WMVLIDAAKG-CVT-------QPPDLSKYPVDFVVMSFYKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADID 314 (508)
Q Consensus 244 ~~vivD~a~~-~g~-------~~~d~~~~~~D~~~~S~~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 314 (508)
+++|.|++-. +|. ...++ ..|+++.+ |.+.+- .-+|.++++++..+.+..-. .+ .
T Consensus 250 ILlI~DEV~tGFGRTG~~FA~e~~gi---~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~-~~-~--------- 313 (449)
T COG0161 250 ILLIADEVATGFGRTGKMFACEHAGI---VPDILCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGD-AG-A--------- 313 (449)
T ss_pred cEEEeecceeCCCcCchhhhhhhcCC---CCCeeeec--ccccccchhhHhHhhhHHHHHHHhccc-CC-e---------
Confidence 9999998853 332 22232 37999988 854411 11788999998876554321 11 0
Q ss_pred hhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhc-ccCCCCCceEEEecCCCCCccc
Q 010538 315 FVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLS-LRHENGADVCTIYGTYTSEVSY 393 (508)
Q Consensus 315 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-l~~~~~~~~~~~~~~~~~~~~~ 393 (508)
| .-.+. -+-|..+.++..+.++.+.+ +.+.++..++..+|.+.|++ +. +...+++-..
T Consensus 314 f-------~HG~T-YsghPlacAaAla~L~i~e~---e~l~~~~~~~~~~l~~~L~~~l~------~~p~VgdVR~---- 372 (449)
T COG0161 314 F-------MHGHT-YSGNPLACAAALANLDILEE---EDLLERVAEIGAYLQAGLQAALA------DHPLVGDVRG---- 372 (449)
T ss_pred e-------ccCCc-cccCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhcc------cCCcEEEeec----
Confidence 0 00000 12233333334445666655 56678888999999999987 32 1223333221
Q ss_pred CCCCceEEEEeeCCCCCc--c---CHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccC
Q 010538 394 HDTGSMVSFNLKRPDGSW--F---GYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIH 468 (508)
Q Consensus 394 ~~~~~~v~~~~~~~~~~~--~---~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 468 (508)
.+-+..+.+....+.. + -...+.+.+.++|+.+|+.
T Consensus 373 --~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~------------------------------------- 413 (449)
T COG0161 373 --LGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL------------------------------------- 413 (449)
T ss_pred --cceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-------------------------------------
Confidence 2566666765332211 1 0234777888999999984
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHhhhhhhhh
Q 010538 469 GKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 469 ~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~ 501 (508)
.+.+=+++-+-.|.+|++++++.+.+-++-
T Consensus 414 ---g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 414 ---GDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred ---CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 347888888899999999999999988764
No 382
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.99 E-value=2.6e-07 Score=97.55 Aligned_cols=262 Identities=11% Similarity=0.010 Sum_probs=137.6
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++.-|+|..+ .+--+|.+++++.++. .... ..... .....++.+++++++.. .+ .+.|++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~-~~~~---~~~~~-----~~~~~~la~~l~~~~p~-~~--~v~f~~sG 113 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREAL-QDGC---NFTRP-----SAIELDAAESFLELIDG-AD--MVKFCKNG 113 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHH-HhCc---CCCCC-----CHHHHHHHHHHHHhCCc-cc--eEEEecCH
Confidence 6788999743 3455888888876654 3221 11111 11222445666676642 24 79999999
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEe-cccccchHHHHHHHHhcCCeEEE--Ecc---CCccCccccccccccccccccchhh
Q 010538 113 TAALKLVGEAFP-WSHQSSYMYT-MENHNSVLGIREYALSQGAAAFA--IDV---EEAVDNDGLSESLVTSTKISLLPIQ 185 (508)
Q Consensus 113 t~al~~~~~~l~-~~~g~~vl~~-~~~h~s~~~~~~~~~~~G~~v~~--v~~---~~~~~~~~l~~~~~~~~~~~~d~~~ 185 (508)
|+|+..++.... ..+...|+.. ...+-+...|.. |..... ++. ....... -.|++.
T Consensus 114 seA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~------------~~d~~~ 176 (431)
T PRK06209 114 SDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFI-----GTTPMSAGIPASVSALTVTFR------------YNDIAS 176 (431)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeccCcccccccccc-----ccCCCCCCCChhHhccccccC------------CCCHHH
Confidence 999988776432 2334455544 111111111111 111000 000 0000000 013566
Q ss_pred hhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC--CC-
Q 010538 186 RRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD--LS- 262 (508)
Q Consensus 186 l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d--~~- 262 (508)
++ +.+++ ..+++..|++..+....+..-.+++|.++|++ +|+++|+|++|. |....- ..
T Consensus 177 l~--~~l~~---~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~------------~g~lLI~DEv~t-G~~~~~~g~~~ 238 (431)
T PRK06209 177 LE--ALFED---HPGRIACVILEPATADEPQDGFLHEVRRLCHE------------NGALFILDEMIT-GFRWHMRGAQK 238 (431)
T ss_pred HH--HHHHh---CCCCEEEEEEccccCCCCCHHHHHHHHHHHHH------------cCCEEEEEcccc-cCCcCcchhhH
Confidence 66 55532 12456777776654443333336777777776 999999999984 332110 11
Q ss_pred --CCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccc-cCC--CCChhHHH
Q 010538 263 --KYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELF-EDG--TASFLSIA 337 (508)
Q Consensus 263 --~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~g--t~~~~~~~ 337 (508)
....|++++ .|.+|+-.-+|++..++++.+.+....... ...+ ..+ ++|...++
T Consensus 239 ~~gv~PDi~t~--gK~lggG~p~~av~~~~~i~~~~~~~~~~~-------------------~~~~~~~~T~~~np~~~a 297 (431)
T PRK06209 239 LYGIVPDLSCF--GKALGNGFAVSALAGKREYMELGGLEHTDR-------------------ERVFLLSTTHGAETHALA 297 (431)
T ss_pred HhCCCcceeee--hhhhcCCcccEEEEEHHHHHhhhcccccCC-------------------CCceeeccCCCCCHHHHH
Confidence 124687665 597774111688888887765311000000 0001 112 34566788
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhc
Q 010538 338 SIRHGFNLINSLTVPAICRHIASLGMYVRKVLLS 371 (508)
Q Consensus 338 ~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 371 (508)
+..++++.+.+. .+.++..++.++|++.|++
T Consensus 298 aa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 298 AAIATMAIYRDE---DVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred HHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHH
Confidence 888889988764 3567777777777777755
No 383
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.96 E-value=8.2e-08 Score=94.69 Aligned_cols=292 Identities=11% Similarity=0.042 Sum_probs=148.9
Q ss_pred hHHHHHHHHHHHHHcC-CCCCCceEEEcCChHHHHHHHHhhcCCC---C--CCeEEEecccccchHHHHHHHHhcCCeEE
Q 010538 83 CDIVRAAREQVLDYFN-ASMKDYKCIFTSGATAALKLVGEAFPWS---H--QSSYMYTMENHNSVLGIREYALSQGAAAF 156 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~-~~~~~~~i~~t~g~t~al~~~~~~l~~~---~--g~~vl~~~~~h~s~~~~~~~~~~~G~~v~ 156 (508)
....++..+++=+.+| +-.+++.|+|..|+|+.++.++-+|.-. . -..|+....-||++.....++.... .+
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~--y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRL--YK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTT--EE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccC--cc
Confidence 4445555555656666 4555679999999999999999988422 1 2368888877776654443332111 11
Q ss_pred EEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCcccccc
Q 010538 157 AIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEI 236 (508)
Q Consensus 157 ~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~ 236 (508)
+ .++. ..+. ...++.+-+=+++++|||.|.+- ..+++.
T Consensus 123 w-----~Gda-----------------~~~~--------~~~~~~~~IElVTSPNNPDG~lr-----~~V~~g------- 160 (363)
T PF04864_consen 123 W-----AGDA-----------------SNFK--------NSDNPSPYIELVTSPNNPDGQLR-----EAVLNG------- 160 (363)
T ss_dssp E-----EEEC-----------------CCGT--------T-S-CCGEEEEEESS-TTT-----------SSTT-------
T ss_pred c-----cccH-----------------Hhhc--------cCCCCCCeEEEEeCCCCCccccc-----chhcCC-------
Confidence 1 1211 1111 11124456667899999999763 123343
Q ss_pred CCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccCCCc--ceEEEEechhHh-hhccccccCceEEecccch
Q 010538 237 SPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG--LGALIMRNDAAK-LLKNTYFSGGTVAASIADI 313 (508)
Q Consensus 237 ~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G--~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~~~ 313 (508)
.+..+|.|-++..++--.--...+-|+..++.+|.-| -+| +||.+++++... ++...+. -
T Consensus 161 -----~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~SK~TG-HAGSR~GWAlVKD~~Va~kM~~y~~-l---------- 223 (363)
T PF04864_consen 161 -----SSGKVIHDLAYYWPHYTPITAPADHDIMLFTLSKLTG-HAGSRFGWALVKDEEVAKKMTKYME-L---------- 223 (363)
T ss_dssp -----TEEEEEEE-TT-STTTS---S-B--SEEEEEHHHHCS--GGG-EEEEEES-HHHHHHHHHHHH-H----------
T ss_pred -----CCcceeeeeeeecccccccCCCCCCceEEEEEecccC-ccccccceeeecCHHHHHHHHHHHH-H----------
Confidence 6788999999998765333334577999999999777 667 899999987643 2322210 0
Q ss_pred hhhhhccCccccccCCCCChhHHHHHHHHHHHHH-------------hcChHHHHHHHHHHHHHHHHHHhcccCCCCCce
Q 010538 314 DFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN-------------SLTVPAICRHIASLGMYVRKVLLSLRHENGADV 380 (508)
Q Consensus 314 ~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~-------------~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~ 380 (508)
...|..--.++-++. -|+.+. +.|.+.+.+|-.+|++ .+.+.. .
T Consensus 224 ------------nTiGvS~dsQLRa~k-iLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~----~~~~S~------r 280 (363)
T PF04864_consen 224 ------------NTIGVSRDSQLRALK-ILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRA----AVSASK------R 280 (363)
T ss_dssp ------------HCSS--HHHHHHHHH-HHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHH----HHCCSS------S
T ss_pred ------------hcccCcHHHHHHHHH-HHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHH----HHHhcC------c
Confidence 001111111111111 111111 1122333333333333 333221 1
Q ss_pred EEEecCCC--C-C--cccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhh
Q 010538 381 CTIYGTYT--S-E--VSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIE 455 (508)
Q Consensus 381 ~~~~~~~~--~-~--~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~ 455 (508)
+.+-.-+. . + -.....+.+.|++....+.. +....|++.||..+.|..|..
T Consensus 281 FSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~-----DC~~~l~~~~I~tr~G~~fga------------------- 336 (363)
T PF04864_consen 281 FSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDE-----DCYAVLREAKIITRSGVLFGA------------------- 336 (363)
T ss_dssp EEE---SCEEETTTTCEEE---SEEEEEESSCGGS-----SHHHHHHCTTEEEEEGGGGTS-------------------
T ss_pred eecCcCCchhccccccccCCCCCeEEEecCCcccc-----cHHHHHHhCCcccCCCCccCC-------------------
Confidence 22211100 0 0 00011368899998754322 278899999999999975433
Q ss_pred cCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 456 AGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
...++|+|+- .+.++.+-|++.|..+|
T Consensus 337 ---------------~~ryVRlSml--~~~d~Fd~l~~rL~~lv 363 (363)
T PF04864_consen 337 ---------------DSRYVRLSML--KRDDDFDQLLERLSKLV 363 (363)
T ss_dssp ----------------TTEEEEESS--S-HHHHHHHHHHHHCCH
T ss_pred ---------------CCCeEEEecc--CCHHHHHHHHHHHHhhC
Confidence 2679999987 49999999999988764
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.80 E-value=7.9e-07 Score=93.20 Aligned_cols=321 Identities=12% Similarity=0.046 Sum_probs=202.1
Q ss_pred chhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHH-H---HHHHHhhcCCCC----CCeEEEecccccchHHHHHHH
Q 010538 77 DISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATA-A---LKLVGEAFPWSH----QSSYMYTMENHNSVLGIREYA 148 (508)
Q Consensus 77 ~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~-a---l~~~~~~l~~~~----g~~vl~~~~~h~s~~~~~~~~ 148 (508)
.......+++..+.+.+.++.|.+. +.|.+++-. + =..+++++.... ..+.+++-..|.+.-+.+.++
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Ma 650 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMA 650 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhc
Confidence 3445567888888899999988863 456544332 1 123444443332 356788888887777666665
Q ss_pred HhcCCeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCcccc-CHHHHHHHH
Q 010538 149 LSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRF-NLDLINIMK 227 (508)
Q Consensus 149 ~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~-~i~~i~~l~ 227 (508)
|.+|+.|..+.++.+ |..+++ +..++ ..++...+.++.+++. |..- .+++++++.
T Consensus 651 ---gmkvvpV~~~~~G~i---------------d~~dLk--~kaek---h~~~Laa~MvTYPST~-GvfE~~i~d~cd~i 706 (1001)
T KOG2040|consen 651 ---GMKVVPVGCDANGNI---------------DMVDLK--AKAEK---HKDNLAALMVTYPSTH-GVFEEGIDDICDII 706 (1001)
T ss_pred ---CCEEEEeeccCCCCc---------------cHHHHH--HHHHH---hhhhhheeEEeccccc-ccccccHHHHHHHH
Confidence 999999999888888 455665 33322 3456778888887665 5544 499999999
Q ss_pred cCCccccccCCCCCCCeEEEEecccc---CC-CCCCCCCCCCCcEEEEeccccccCCCc-----ceEEEEechhHhhhcc
Q 010538 228 KNPERILEISPFSKGRWMVLIDAAKG---CV-TQPPDLSKYPVDFVVMSFYKIFGYPTG-----LGALIMRNDAAKLLKN 298 (508)
Q Consensus 228 ~~~~~~~~~~~~~~~g~~vivD~a~~---~g-~~~~d~~~~~~D~~~~S~~K~~g~P~G-----~G~l~~~~~~~~~l~~ 298 (508)
|+ ||--|..||+.- +| +.| ..+|.|+.-...||+|+-|.| +|=+-+++.+ .|
T Consensus 707 He------------hGGQVYlDGANMNAqVGlc~p---Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HL----ap 767 (1001)
T KOG2040|consen 707 HE------------HGGQVYLDGANMNAQVGLCRP---GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL----AP 767 (1001)
T ss_pred Hh------------cCCEEEecCCCccceecccCC---ccccccceeecccceeeecCCCCCCCCCccchhhhc----cc
Confidence 98 999999999843 22 233 344689999999998874543 5666666654 44
Q ss_pred ccccCceEEecccchhhhhhccCccccccCCCC---Ch--hHHHH-HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcc
Q 010538 299 TYFSGGTVAASIADIDFVKRRQGVEELFEDGTA---SF--LSIAS-IRHGFNLINSLTVPAICRHIASLGMYVRKVLLSL 372 (508)
Q Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~---~~--~~~~~-l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l 372 (508)
...+...++... .......|+. ++ ..+.. -++-++++...|+..-.+-..-.++|+.++|+..
T Consensus 768 fLP~HpVvs~~~-----------~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h 836 (1001)
T KOG2040|consen 768 FLPSHPVVSPGR-----------PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH 836 (1001)
T ss_pred cCCCCCccCCCC-----------CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc
Confidence 433322111000 0000001110 01 11112 2445778888888888888888899999999875
Q ss_pred cCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCC-CccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhh
Q 010538 373 RHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDG-SWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLL 451 (508)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~ 451 (508)
. .+-+.++.+. -.+-+.+++...+. ..+..-+++++|.+.|...-+=+ +-
T Consensus 837 Y------kil~~~~~~~------vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTms-wP---------------- 887 (1001)
T KOG2040|consen 837 Y------KILFRGENGL------VAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMS-WP---------------- 887 (1001)
T ss_pred c------ceeEecCCcc------eeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccc-cc----------------
Confidence 2 2222233321 12223334333322 22566789999999998843311 10
Q ss_pred hhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhhhhh
Q 010538 452 SNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~~~~ 503 (508)
..|++=|-+.-.-+.+|+|+++++|-.+-+.++
T Consensus 888 -------------------V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 888 -------------------VAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred -------------------cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 267888888888899999999999987766554
No 385
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.78 E-value=2.8e-06 Score=95.45 Aligned_cols=218 Identities=11% Similarity=0.063 Sum_probs=130.3
Q ss_pred CCceEEEEeCC-CCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCCC----CCCCCCCCcEEEEec
Q 010538 200 DAYNLFAFPSE-CNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQP----PDLSKYPVDFVVMSF 273 (508)
Q Consensus 200 ~~t~lv~~~~~-~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~~----~d~~~~~~D~~~~S~ 273 (508)
+++..|++.-+ +...|.+.|-+...+.+++ +|+++|+++|.|+++.. |..- .+......|+++++
T Consensus 583 ~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~--------lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g- 653 (817)
T PLN02974 583 GHIAALIIEPVLHGAGGMLLIDPLFQRALVQ--------VCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA- 653 (817)
T ss_pred CCEEEEEEeccccCCCCcccCCHHHHHHHHH--------HHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec-
Confidence 46788888774 6777888874433333333 44459999999999863 2221 11112247999998
Q ss_pred cccccCC-CcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCC--CCChhHHHHHHHHHHHHHhcC
Q 010538 274 YKIFGYP-TGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG--TASFLSIASIRHGFNLINSLT 350 (508)
Q Consensus 274 ~K~~g~P-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~l~~al~~~~~~g 350 (508)
|.+++- .-+|.++++++..+.+...-.. ...+..+ +-|..+.++..++++++.+.+
T Consensus 654 -KgLtgG~~Plaa~l~~~~I~~~f~~~~~~--------------------~~~~hg~Ty~gnpl~cAaala~L~~~~~~~ 712 (817)
T PLN02974 654 -KLLTGGLVPLAATLATEEVFEAFRGPSKL--------------------DALLHGHSYTAHPMGCAAAAKALQWYKDPS 712 (817)
T ss_pred -ccccCCCCccEEEEEcHHHHHhhcccccc--------------------CCcccCCCCCcCHHHHHHHHHHHHHHHccc
Confidence 965521 1279999999987655311000 0000111 234556666667788876642
Q ss_pred -hHHHHHHHHHHHHHHHHHHh-cccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCC-ccC---HHHHHHHHh-h
Q 010538 351 -VPAICRHIASLGMYVRKVLL-SLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGS-WFG---YREVEKLAS-L 423 (508)
Q Consensus 351 -~~~i~~~~~~l~~~l~~~L~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~---~~~l~~~L~-~ 423 (508)
.+.+.++..++.+++.+.|. .+.. .+.+.-+ . -.+.++.+.+.+.... .+. ...+.+.+. +
T Consensus 713 ~~~~l~~~~~~l~~~l~~~l~~~l~~---~p~V~~V---R------g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~ 780 (817)
T PLN02974 713 TNPNLIPPGSRLRELWDEELVRAISS---LPNVERV---V------SLGTVLALELDAEGSGSGYSSLYARSVVRRLRRE 780 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh---CCCeeEE---E------eeeeEEEEEEecCCcccccchHHHHHHHHHHHHh
Confidence 24556666666666666662 2210 0222111 1 1267788887542211 111 134666677 8
Q ss_pred CCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 424 SGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 424 ~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
+|+.+++. .+.||+.+.+.++.+|++++++.|.+-+
T Consensus 781 ~Gl~~r~~----------------------------------------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 781 DGIYARPL----------------------------------------GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCEEEEec----------------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 99998762 3689999999999999999999987643
No 386
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.69 E-value=1.5e-06 Score=88.99 Aligned_cols=269 Identities=13% Similarity=0.089 Sum_probs=150.7
Q ss_pred CCCeeeeCC------CCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCCh
Q 010538 39 NGTVYLDHA------GATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGA 112 (508)
Q Consensus 39 ~~~iyld~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~ 112 (508)
++..|+|.. ..+--+|.+.+++.+....-.+..+. .. ......++-+++.+.++-..+ .+.|++|+
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~-~~-----~~~~~~~la~~L~~~~p~~~~--~v~f~~sG 85 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFS-GF-----THPEAAELAEKLAELFPGGLD--RVFFANSG 85 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTT-TS-----EEHHHHHHHHHHHHHSSTTEE--EEEEESSH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhccccccc-ce-----eccchhhhhhhhhhccccccc--eeeeccCc
Confidence 677788884 33444788887765543221111111 11 223455667778888854444 89999999
Q ss_pred HHHHHHHHhhcC------C-CCCCeEEEecccccc-hHHHHHH-----HHh-cC---CeEEEEccCCccCcccccccccc
Q 010538 113 TAALKLVGEAFP------W-SHQSSYMYTMENHNS-VLGIREY-----ALS-QG---AAAFAIDVEEAVDNDGLSESLVT 175 (508)
Q Consensus 113 t~al~~~~~~l~------~-~~g~~vl~~~~~h~s-~~~~~~~-----~~~-~G---~~v~~v~~~~~~~~~~l~~~~~~ 175 (508)
++|+..++.... . .....|+.....|-. ....... .+. .+ ..+..+|....... .. ....
T Consensus 86 seAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~--~~~~ 162 (339)
T PF00202_consen 86 SEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAAD-EE--EQAC 162 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHH-HH--HHHH
T ss_pred hHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchh-hh--HHHH
Confidence 999988776653 1 234567766544433 3333221 111 11 23455555432110 00 0000
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEecc
Q 010538 176 STKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAA 251 (508)
Q Consensus 176 ~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a 251 (508)
... ..+.+. ....+++..|++.-+....|.+.+ +++|.++|++ +|+++|+|++
T Consensus 163 ~~~---~~~~~~--------~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~------------~gillI~DEV 219 (339)
T PF00202_consen 163 LNA---LEELIA--------ALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCRE------------HGILLIADEV 219 (339)
T ss_dssp HHH---HHHHHH--------HHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHH------------TT-EEEEEET
T ss_pred HHH---HHHHHH--------hhcCCcEEEEEEeccccccCccccccchhhehcccccc------------cccceecccc
Confidence 000 011111 111456788888888888888776 3455555665 9999999999
Q ss_pred ccC-CCCCCCC----CCCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccc
Q 010538 252 KGC-VTQPPDL----SKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELF 326 (508)
Q Consensus 252 ~~~-g~~~~d~----~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 326 (508)
++. |..-.-+ .....|+++++ |.+++-.-+|.+++++++.+.+.+...
T Consensus 220 ~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~------------------------- 272 (339)
T PF00202_consen 220 QTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVLGSEEIMEAFQPGSH------------------------- 272 (339)
T ss_dssp TTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEEHHHHTTSCTTSS-------------------------
T ss_pred cccccccCCccceecccccCcccccc--cchhhhhhcccccccchhhcccccccc-------------------------
Confidence 874 3222111 12357999998 966632338999999998765544321
Q ss_pred cCCC--CChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcc
Q 010538 327 EDGT--ASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSL 372 (508)
Q Consensus 327 ~~gt--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l 372 (508)
.+| -+..++++..++++.+.+ +++.++..++.++|.+.|+++
T Consensus 273 -~~T~~g~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 273 -GSTFGGNPLSCAAALATLEILEE---EDLLERVRELGERLREGLREL 316 (339)
T ss_dssp -TCTTTT-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHH
T ss_pred -ccccccchHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHHHHHHH
Confidence 122 234456666667777766 345677788888888887765
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.55 E-value=3.1e-06 Score=88.88 Aligned_cols=298 Identities=13% Similarity=0.104 Sum_probs=177.9
Q ss_pred HHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHH-HHhcCCeEEEEccCCccCcc
Q 010538 89 AREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREY-ALSQGAAAFAIDVEEAVDND 167 (508)
Q Consensus 89 ~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~-~~~~G~~v~~v~~~~~~~~~ 167 (508)
-...++++.|.+.. .-.+..-+|.|-..+..+.....+.++++....||..+...+. ++.+|+++...+...
T Consensus 168 yQTmi~dlTGL~~a--NASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~----- 240 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMA--NASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKE----- 240 (1001)
T ss_pred hHHhhhhccCCccc--chhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecCHHH-----
Confidence 45678899998876 5555556666666655555555667799999999988776653 333555544433211
Q ss_pred ccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEE
Q 010538 168 GLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVL 247 (508)
Q Consensus 168 ~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vi 247 (508)
.. ...+...-+.+..+. ..|.+.|.+++.+.++. .|..++
T Consensus 241 ------------------~~---------~s~~~v~gvlvQYP~-t~G~i~d~~el~~~a~~------------~~s~vv 280 (1001)
T KOG2040|consen 241 ------------------AD---------YSSKDVSGVLVQYPD-TEGSVLDFDELVELAHA------------NGSLVV 280 (1001)
T ss_pred ------------------hh---------ccccceeEEEEEcCC-CCCcccCHHHHHHHhhc------------cCceEE
Confidence 11 002345666666654 46999999999999997 666654
Q ss_pred EeccccCCCCCCCCCCCCCcEEEEeccccccCCCc-----ceEEEEechhHhhhccccccCceEEecccchhhh--hhcc
Q 010538 248 IDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGYPTG-----LGALIMRNDAAKLLKNTYFSGGTVAASIADIDFV--KRRQ 320 (508)
Q Consensus 248 vD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~P~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--~~~~ 320 (508)
+-.---.-++--+..++|+|+.++|.+. ||.|-| .||+.+++++...+.-.+.|-. ........+- ....
T Consensus 281 ~atDLLaLtiLrpPgefGaDIavGSsQR-FGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvt--kD~~gk~a~RLALQTR 357 (1001)
T KOG2040|consen 281 MATDLLALTILRPPGEFGADIAVGSSQR-FGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVT--KDALGKEAYRLALQTR 357 (1001)
T ss_pred EeehhhHHHccCChhhcCceeeeccccc-cCccccCCCchHHHHHHHHHHHhhCCCceEeee--ecccccHHHHHHHHHH
Confidence 4321111222233457789999999998 444544 4666666665433332322210 0001111111 1111
Q ss_pred CccccccCCCCChhHHHHHHH----HHH-HHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCC
Q 010538 321 GVEELFEDGTASFLSIASIRH----GFN-LINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHD 395 (508)
Q Consensus 321 ~~~~~~~~gt~~~~~~~~l~~----al~-~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~ 395 (508)
.+.-++.-.|.|+-..-++-+ ... ++...|++.|.+|+..++-+|...|++. +-++....-
T Consensus 358 EQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-------ghel~~k~f------- 423 (1001)
T KOG2040|consen 358 EQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-------GHELQHKPF------- 423 (1001)
T ss_pred HHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-------chhhccccc-------
Confidence 223445566777643333221 111 3344589999999999999999999886 556654421
Q ss_pred CCceEEEEeeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceE
Q 010538 396 TGSMVSFNLKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAI 475 (508)
Q Consensus 396 ~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 475 (508)
--.+.+++.. . ..++.....+++|-++.- .++.|
T Consensus 424 -FDTLkI~~~~-s-----~~~~l~rA~~~~iNlr~~---------------------------------------ed~ti 457 (1001)
T KOG2040|consen 424 -FDTLKIRCGC-S-----AEEVLDRAAKRQINLRLV---------------------------------------EDGTI 457 (1001)
T ss_pred -cceEEEEecC-c-----HHHHHHHHHhhcCceEEe---------------------------------------ecCce
Confidence 2234444433 1 223566666667776641 26789
Q ss_pred EEecCCCCCHHHHHHHHHhhh
Q 010538 476 RVSFGYMSTFEDAKVNRCSSF 496 (508)
Q Consensus 476 Ris~~~~~t~eev~~l~~~~~ 496 (508)
-+|+---.+.+|++.|+..+.
T Consensus 458 gvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 458 GVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred EEeecccccHHHHHHHHHHHc
Confidence 999988899999999987754
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.48 E-value=2e-06 Score=82.82 Aligned_cols=180 Identities=13% Similarity=0.052 Sum_probs=122.5
Q ss_pred hhHHHH-HHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHH-H-------HHHHHhcC
Q 010538 82 TCDIVR-AAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLG-I-------REYALSQG 152 (508)
Q Consensus 82 ~~~~~~-~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~-~-------~~~~~~~G 152 (508)
..++-+ .+.+-.|+.+|++..--..-|. ++|+|+..++.++ ++|||+++.--..-...+. . ...+..+|
T Consensus 62 ydD~GRdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~-LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 62 YDDLGRDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGI-LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred ccccchhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhc-cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence 334333 3556679999998761122333 5677999999998 7999998876543332221 1 12355678
Q ss_pred CeEEEEccCCccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCC----CCCCccccCHHHHHHHHc
Q 010538 153 AAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSE----CNFSGSRFNLDLINIMKK 228 (508)
Q Consensus 153 ~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~----~n~tG~~~~i~~i~~l~~ 228 (508)
++.+.||+..++.+ |.+.++ .+ ++++||+|.+.-. .-|+=.+.+++++...+|
T Consensus 140 i~Y~~v~Lt~~gki---------------D~~~v~--~~------i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk 196 (416)
T COG4100 140 IKYKAVPLTADGKI---------------DIQAVK--TA------ISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVK 196 (416)
T ss_pred cceeecccccCCcc---------------cHHHHH--Hh------cCccceEEEEEeccCcCCCCcccHHHHHHHHHHHH
Confidence 99999999888888 678888 44 4689999988542 223333444555566666
Q ss_pred CCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEeccccccC-CCc-ceEEEEechhHhhh
Q 010538 229 NPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFGY-PTG-LGALIMRNDAAKLL 296 (508)
Q Consensus 229 ~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g~-P~G-~G~l~~~~~~~~~l 296 (508)
+ .+.+++++||.+++--.........++|++.+|+=|.-|| -.- -|++..+.++.+..
T Consensus 197 ~----------inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 197 E----------INPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred h----------cCCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 5 2479999999999877666777777899999999995442 100 27888888887754
No 389
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.47 E-value=7e-05 Score=75.53 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=119.5
Q ss_pred CCCeeeeCCC------CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhhHHHHHHHHHHHHHcCC-CCCCceEEEcCC
Q 010538 39 NGTVYLDHAG------ATLYSELQMEAIFRDFTTNVYGNPHSQSDISLATCDIVRAAREQVLDYFNA-SMKDYKCIFTSG 111 (508)
Q Consensus 39 ~~~iyld~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~~~~~~i~~t~g 111 (508)
++.=|+|+.+ .+.-.|.+.+++..++.. .+ ++.. +.-+.+ .-.+.+.+.+.++- .++ .|.|+++
T Consensus 54 ~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k--~~--hs~~--~~~t~e-av~l~~~l~~~~~~~~~~--rvff~ns 124 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGHANPEVARALAEQAKK--LG--HSSN--GYFTLE-AVELEEVLSAVLGKGSAE--RVFFCNS 124 (433)
T ss_pred CcceeeeeccceeccccCCCCHHHHHHHHHHHhh--he--eccC--ccccHH-HHHHHHHHHhcccCCCcc--EEEEecC
Confidence 5566787754 344467777776554432 11 1111 011122 22344455555532 455 8999999
Q ss_pred hHHHHHHHHhhcC-CC----CCC--eEEEe-cccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccccccccch
Q 010538 112 ATAALKLVGEAFP-WS----HQS--SYMYT-MENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTSTKISLLP 183 (508)
Q Consensus 112 ~t~al~~~~~~l~-~~----~g~--~vl~~-~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~ 183 (508)
+|+|+..++.... .. +-+ .+|.- ..-|...+..+... +..-..+|.++.. .+.....--|.
T Consensus 125 GTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~---~~s~y~~~~~p~~--------p~v~~~~ynd~ 193 (433)
T KOG1401|consen 125 GTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT---GNSKYGLPFDPIA--------PDVVTAEYNDS 193 (433)
T ss_pred CcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh---cccccCCCCCCCC--------CceeecccCCH
Confidence 9999988765431 11 111 25544 44444444444432 2222222222100 00000111145
Q ss_pred hhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCCCCC--
Q 010538 184 IQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQPPD-- 260 (508)
Q Consensus 184 ~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~~~d-- 260 (508)
.+++ +.++. .++....|++..+.-.-|.+..-.+.....++ .|+++|+++|.|+++.. |..-.-
T Consensus 194 t~l~--k~~~~---h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k--------~C~~~~vl~I~DEV~tG~gR~g~~~a 260 (433)
T KOG1401|consen 194 TALE--KLFES---HKGEIAAVIVEPIQGAGGIIPADPEFLIGLRK--------ECDDNGVLLIFDEVQTGLGRLGYGWA 260 (433)
T ss_pred HHHH--HHHHh---CCCceEEEEEecccCCCCcccCCHHHHHHHHH--------HHhhcCceEEeehhhhCccccchHHH
Confidence 6666 55533 34567888888888776766553333333332 45669999999999863 221110
Q ss_pred --CCCCCCcEEEEeccccccCCCcceEEEEechhHhhhccc
Q 010538 261 --LSKYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNT 299 (508)
Q Consensus 261 --~~~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~ 299 (508)
.-....|+.+.. |.+++---+|..+++++..+.+.|-
T Consensus 261 ~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~~~i~~~ 299 (433)
T KOG1401|consen 261 QEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVAEMISPG 299 (433)
T ss_pred HHHhCcCCcceeeh--hhccCCceeEEEeehHHHHhhcCCC
Confidence 001236888776 9665212289999999998877654
No 390
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.43 E-value=5.7e-05 Score=74.80 Aligned_cols=329 Identities=16% Similarity=0.069 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhc----CCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccC
Q 010538 86 VRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAF----PWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 86 ~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l----~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~ 161 (508)
+..+.+.+.+.+|.+ -++-|.-+-.|=++++..+ ...+|++.++....|-.... ...+..|..++-++.+
T Consensus 81 ~~~L~~avkdifGfq----~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr--~h~~~ng~~~~n~~~~ 154 (471)
T COG3033 81 YYALADAVKDIFGFQ----YTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTR--GHIQINGATPRNVYVD 154 (471)
T ss_pred HHHHHHHHHHhcCce----eeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchh--HHHHhcCCcccccccc
Confidence 344556677778864 3455655554544444433 12345555555444433322 2344568888888776
Q ss_pred CccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEe-CCCCCCccccCHHHHHHHHcCCccccccCCCC
Q 010538 162 EAVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFP-SECNFSGSRFNLDLINIMKKNPERILEISPFS 240 (508)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~-~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~ 240 (508)
+..+-+ ...+.+=..|++.++ ..|++.. -++...|+++ ..++.-|.-.+++.+.++.+ +|+
T Consensus 155 ea~d~~-----~~~pFKGd~D~~kLe--~lidevG--~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~---------ia~ 216 (471)
T COG3033 155 EAFDTE-----VKYPFKGNFDLEKLE--RLIDEVG--ADNVPYIVLTITNNSAGGQPVSMANMKAVYE---------IAK 216 (471)
T ss_pred cccccc-----ccCCCCCccCHHHHH--HHHHHhC--cccCcEEEEEEeccccCCCcchHHhHHHHHH---------HHH
Confidence 422110 012333344788888 7775432 2334444443 34555677777665555544 444
Q ss_pred CCCeEEEEeccccC-----------CCCCCCCCCC------CCcEEEEeccc-cccCCCcceEEEEech----hHhhhcc
Q 010538 241 KGRWMVLIDAAKGC-----------VTQPPDLSKY------PVDFVVMSFYK-IFGYPTGLGALIMRND----AAKLLKN 298 (508)
Q Consensus 241 ~~g~~vivD~a~~~-----------g~~~~d~~~~------~~D~~~~S~~K-~~g~P~G~G~l~~~~~----~~~~l~~ 298 (508)
+++++++.|++--+ |....++.++ -+|-++.|+-| .+. +-| |++.++++ +.+.++.
T Consensus 217 ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lv-nmG-Gfl~~~D~~~fDvy~~~~~ 294 (471)
T COG3033 217 KYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLV-NMG-GFLCFKDDSFFDVYEECRT 294 (471)
T ss_pred HcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccccee-ccc-cEEEecCccHHHHHHHHHh
Confidence 59999999987422 4444444322 47999999999 666 656 89999887 3333332
Q ss_pred c-cccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCC
Q 010538 299 T-YFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENG 377 (508)
Q Consensus 299 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~ 377 (508)
. +..-+ .-..|....-.+.+++..|..- ...+-+ ++-....+||.+.|.+.
T Consensus 295 ~~V~~eG--------------------~~tYGgl~GrdmealAvGL~e~--~~~~yl-~~Rv~Qv~YL~~~l~~~----- 346 (471)
T COG3033 295 LVVVQEG--------------------FPTYGGLAGRDMEALAVGLREG--VNFDYL-AHRVAQVQYLADGLEEA----- 346 (471)
T ss_pred heEeecc--------------------ccccCcccchhHHHHHHHHHHh--cCcHHH-HHHHHHHHHHHHHHHhc-----
Confidence 2 11111 0112333344455555555432 223334 44456689999999987
Q ss_pred CceEEEecCCCCCcccCCCCceEEEE----eeCCCCCccCHHHHHHHH-hhCCCeecc-CCCCCchHHHhhcCCChhhhh
Q 010538 378 ADVCTIYGTYTSEVSYHDTGSMVSFN----LKRPDGSWFGYREVEKLA-SLSGIQLRT-GCFCNPGACAKYLGLSHSDLL 451 (508)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~l~~~L-~~~gI~v~~-g~~~~~~~~~~~~~~~~s~~~ 451 (508)
|+.++.|.+ ++-+.++ +++.+.+.+....+...| .+.||.... |.....+.. -
T Consensus 347 --GVpi~~paG--------GHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~--k--------- 405 (471)
T COG3033 347 --GVPIVQPAG--------GHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDP--K--------- 405 (471)
T ss_pred --CCeeEecCC--------CceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCC--C---------
Confidence 798888875 5666665 345555556555555444 678998643 322111110 0
Q ss_pred hhhhcCCccCCCccccCCCCCceEEEecCCC-CCHHHHHHHHHhhhhhhhh
Q 010538 452 SNIEAGHVCWDDNDIIHGKPTGAIRVSFGYM-STFEDAKVNRCSSFDFVNF 501 (508)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-~t~eev~~l~~~~~~~~~~ 501 (508)
=|.. ....-..+|+++--- -|.+.+|.+++.++.+.+.
T Consensus 406 --tg~q----------~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 406 --TGKQ----------HPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred --cccc----------CCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 0000 111236799997633 3788999999988876543
No 391
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.71 E-value=0.0027 Score=61.66 Aligned_cols=390 Identities=16% Similarity=0.115 Sum_probs=199.8
Q ss_pred HHHHHHHHhcccCCCC------CCCCchHHHHHHhhccCCCCCeeeeC----CCCCCCCHHHHHHHHHHhhccccCCCCC
Q 010538 5 DKEEFLKEFGEDYGYP------NAPKSIDQIRATEFKRLENGTVYLDH----AGATLYSELQMEAIFRDFTTNVYGNPHS 74 (508)
Q Consensus 5 ~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~f~~~~~~~iyld~----~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 74 (508)
.|+|-|+-+-++-+.. ..|..+-+-.. +|-..+++.-|||. +-.+-.+|.++++...++... +.+.
T Consensus 6 SK~etlklRk~hIG~~Cq~Fy~sDP~kivRaq~-QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~---~tN~ 81 (452)
T KOG1403|consen 6 SKTETLKLRKQHIGQACQLFYRSDPLKIVRAQG-QYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATI---STNN 81 (452)
T ss_pred hhHHHHhHHHhccCcceeEEecCCchhhehhcc-ceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHh---cccc
Confidence 3566666655543221 11222333332 45555678888886 235667999999987765331 1222
Q ss_pred ccchhhhhhHHHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcC--CCCCCeEEEecccccchHHH-HH---HH
Q 010538 75 QSDISLATCDIVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFP--WSHQSSYMYTMENHNSVLGI-RE---YA 148 (508)
Q Consensus 75 ~~~~~~~~~~~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~--~~~g~~vl~~~~~h~s~~~~-~~---~~ 148 (508)
.+ -..++.+-+++..+.+=+.+ .+.|++++++|+.++++... .+..|.|.+. ..|-+.+.. ++ +-
T Consensus 82 RF----lhd~lv~cA~~l~stlPeLs----vc~F~NSGSEANDLALRLAR~ftkhqDvItld-HAYHGHl~s~mE~SPYK 152 (452)
T KOG1403|consen 82 RF----LHDELVQCARTLTSTLPELS----VCFFVNSGSEANDLALRLARNFTKHQDVITLD-HAYHGHLQSVMEVSPYK 152 (452)
T ss_pred hh----hHHHHHHHHHHHhhcCCCce----EEEEecCCchhhHHHHHHHHhhcccCceEEEe-chhccceeeeeecccee
Confidence 11 12455666777777766644 57999999999998876542 2334555433 333222211 11 10
Q ss_pred HhcC---CeEEEE---ccCC--ccCc-cccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccC
Q 010538 149 LSQG---AAAFAI---DVEE--AVDN-DGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFN 219 (508)
Q Consensus 149 ~~~G---~~v~~v---~~~~--~~~~-~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~ 219 (508)
-..| .+..+| |..+ .+.. ++.-+.-++...++.+++.+.+ ..+ ..+.....++..+.++.-|.++|
T Consensus 153 F~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~-d~~----~~g~gvAAfiAEslQSCGGQiiP 227 (452)
T KOG1403|consen 153 FNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQ-DQL----AKGQGVAAFIAESLQSCGGQIIP 227 (452)
T ss_pred ccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHH-HHH----hcCCcHHHHHHHHHHhcCCcccC
Confidence 1112 121222 2211 0110 0000111222344444444431 111 12334455556677788899999
Q ss_pred HH----HHHHHHcCCccccccCCCCCCCeEEEEeccccC-CCC---CCCCCC--CCCcEEEEeccccccCCCcceEEEEe
Q 010538 220 LD----LINIMKKNPERILEISPFSKGRWMVLIDAAKGC-VTQ---PPDLSK--YPVDFVVMSFYKIFGYPTGLGALIMR 289 (508)
Q Consensus 220 i~----~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~-g~~---~~d~~~--~~~D~~~~S~~K~~g~P~G~G~l~~~ 289 (508)
.. ++.+.++. +|-..|.|.+|.. |.. -..+.. .=.|+++.. |-+|.-.-++.+...
T Consensus 228 PagYFq~Va~~Vr~------------aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmg--KpmGNGhPVa~Vatt 293 (452)
T KOG1403|consen 228 PAGYFQAVADAVRS------------AGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMG--KPMGNGHPVAAVATT 293 (452)
T ss_pred chhHHHHHHHHHhc------------CCCeEEeehhhhcccccchhhhhhhhhccccchheec--ccCCCCCeeeEEecc
Confidence 54 55666665 8999999999852 221 111111 125777766 744422127888888
Q ss_pred chhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 010538 290 NDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVPAICRHIASLGMYVRKVL 369 (508)
Q Consensus 290 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L 369 (508)
++..+.+... +. ++-...|..+. +.+...+.++.+. -++++.+..+..++|...|
T Consensus 294 keIA~Af~at----gv-----------------~YFNTyGGnPV-sCAv~laVm~v~e---~E~Lq~ha~~vG~~L~~lL 348 (452)
T KOG1403|consen 294 KEIAQAFHAT----GV-----------------EYFNTYGGNPV-SCAVGLAVMRVCE---DENLQEHAQQVGEKLEVLL 348 (452)
T ss_pred HHHHHHhccc----cc-----------------eehhccCCCch-hHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHH
Confidence 8876554432 10 11111122222 2222223444443 3788888888999998888
Q ss_pred hcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCc-cCH---HHHHHHHh-hCCCeeccCCCCCchHHHhhcC
Q 010538 370 LSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSW-FGY---REVEKLAS-LSGIQLRTGCFCNPGACAKYLG 444 (508)
Q Consensus 370 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~---~~l~~~L~-~~gI~v~~g~~~~~~~~~~~~~ 444 (508)
+++. ...+++++-.. -+-++-+++-.....+ .+. .-+...|+ .++|.++..-
T Consensus 349 ~~~k-----~kh~~IGDvRG------vGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG------------ 405 (452)
T KOG1403|consen 349 RRLK-----QKHECIGDVRG------VGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG------------ 405 (452)
T ss_pred HHHh-----hhccceecccc------ceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC------------
Confidence 7653 23455665432 1334444442211111 111 12344444 4578876521
Q ss_pred CChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhh
Q 010538 445 LSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFV 499 (508)
Q Consensus 445 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~ 499 (508)
-.++.+.|-+-.-.++++++.++..+.+++
T Consensus 406 -------------------------Ph~NilKiKPPmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 406 -------------------------PHRNILKIKPPMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred -------------------------CCCceeecCCCcccChhhHHHHHHHHHHHH
Confidence 125778887766667888888877776665
No 392
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0021 Score=62.84 Aligned_cols=276 Identities=13% Similarity=0.119 Sum_probs=145.0
Q ss_pred CChHHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcC-CeEEEEccCCccCccccccccccccccccchhhhh
Q 010538 110 SGATAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQG-AAAFAIDVEEAVDNDGLSESLVTSTKISLLPIQRR 187 (508)
Q Consensus 110 ~g~t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G-~~v~~v~~~~~~~~~~l~~~~~~~~~~~~d~~~l~ 187 (508)
-|+|.|+.+...-+. +-+...|.++...-++.. ..++..| .++...+..+...- ..|.+.+.
T Consensus 106 lsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~---~if~~aGf~tv~~Y~yWd~~~k-------------~~d~e~~L 169 (410)
T KOG1412|consen 106 LSGTGALRIAADFLATFYNKNTVYVSNPTWENHH---AIFEKAGFTTVATYPYWDAENK-------------CVDLEGFL 169 (410)
T ss_pred ccccchhhhhHHHHHHhcccceeEecCCchhHHH---HHHHHcCCceeeeeeeecCCCc-------------eecHHHHH
Confidence 466667766554442 223556776653333333 2345567 55666665432211 11455554
Q ss_pred cCCCCCCCCCCCCCceEEEEeCC-CCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEecc-ccCCCCCCCCCCC-
Q 010538 188 KGASFPERDPAGDAYNLFAFPSE-CNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAA-KGCVTQPPDLSKY- 264 (508)
Q Consensus 188 ~~~~l~~~~~~~~~t~lv~~~~~-~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a-~~~g~~~~d~~~~- 264 (508)
+.|+. .|.-.++.+..+ +||||.=-.-+....+++- + +..+.+.+.|-+ |++..-++|-..|
T Consensus 170 --sdl~~----APe~si~iLhaCAhNPTGmDPT~EQW~qia~v--------i-k~k~lf~fFDiAYQGfASGD~~~DawA 234 (410)
T KOG1412|consen 170 --SDLES----APEGSIIILHACAHNPTGMDPTREQWKQIADV--------I-KSKNLFPFFDIAYQGFASGDLDADAWA 234 (410)
T ss_pred --HHHhh----CCCCcEEeeeccccCCCCCCCCHHHHHHHHHH--------H-HhcCceeeeehhhcccccCCccccHHH
Confidence 44322 244456666555 8999987777755555442 1 126888888855 5665555554433
Q ss_pred -------CC-cEEEEeccccccCCCc--ceEEEE--echh-HhhhccccccCceEEecccchhhhhhccCccccccCCCC
Q 010538 265 -------PV-DFVVMSFYKIFGYPTG--LGALIM--RNDA-AKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTA 331 (508)
Q Consensus 265 -------~~-D~~~~S~~K~~g~P~G--~G~l~~--~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 331 (508)
+. =|++-|+.|.|| .++ +|.+-+ ++.. +..+..... ...+.....|
T Consensus 235 iR~fV~~g~e~fv~QSFaKNfG-lYneRvGnltvv~~n~a~i~~v~SQl~--------------------lviR~~~SNP 293 (410)
T KOG1412|consen 235 IRYFVEQGFELFVCQSFAKNFG-LYNERVGNLTVVVNNPAVIAGVKSQLT--------------------LVIRSNWSNP 293 (410)
T ss_pred HHHHHhcCCeEEEEhhhhhhcc-cccccccceEEEecChhHHHHHHHHHH--------------------HHHhhccCCC
Confidence 33 266779999887 554 565543 3332 211111100 0011111112
Q ss_pred ChhHHHHHHH------HH-HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCce-EEEecCCCCCcccCCCCceEEEE
Q 010538 332 SFLSIASIRH------GF-NLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADV-CTIYGTYTSEVSYHDTGSMVSFN 403 (508)
Q Consensus 332 ~~~~~~~l~~------al-~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~ 403 (508)
+..+.--... -. +|.++ +..+..|+.+++..|++.|..+. .|| +.-+. ++.++.+|.
T Consensus 294 PAyGArIV~kvL~tP~lre~W~~s--ik~MssRI~~MR~aLrd~L~aL~----TPGtWDHI~---------~QiGMFSyT 358 (410)
T KOG1412|consen 294 PAYGARIVHKVLSTPELREQWIQS--IKTMSSRIKKMRTALRDHLVALK----TPGTWDHIT---------QQIGMFSYT 358 (410)
T ss_pred cchhhHHHHHHhcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC----CCCcHHHHH---------hhccceeec
Confidence 2111111111 11 23333 78899999999999999998873 222 11111 225665554
Q ss_pred eeCCCCCccCHHHHHHHHhhCCCeeccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCC
Q 010538 404 LKRPDGSWFGYREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMS 483 (508)
Q Consensus 404 ~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 483 (508)
+ +.+..+..+.+.+.|.+.. .| ||+++..|
T Consensus 359 --G-----Ltp~qV~~li~~h~vyLl~-----------------------------------------~G--RInisGLN 388 (410)
T KOG1412|consen 359 --G-----LTPAQVDHLIENHKVYLLS-----------------------------------------DG--RINISGLN 388 (410)
T ss_pred --C-----CCHHHHHHHHHhceEEEec-----------------------------------------CC--cEeeeccc
Confidence 3 3334455555667777543 34 55555444
Q ss_pred CHHHHHHHHHhhhhhhhhhh
Q 010538 484 TFEDAKVNRCSSFDFVNFSQ 503 (508)
Q Consensus 484 t~eev~~l~~~~~~~~~~~~ 503 (508)
-..|+++.+++.+-|++++
T Consensus 389 -~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 389 -MKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred -cccHHHHHHHHHHHHHhhc
Confidence 3568888888888777764
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.10 E-value=0.0082 Score=59.74 Aligned_cols=201 Identities=15% Similarity=0.117 Sum_probs=120.0
Q ss_pred CCceEEEEeCCCCCCccccC----HHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC--------CCCCCCCCCCc
Q 010538 200 DAYNLFAFPSECNFSGSRFN----LDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT--------QPPDLSKYPVD 267 (508)
Q Consensus 200 ~~t~lv~~~~~~n~tG~~~~----i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~--------~~~d~~~~~~D 267 (508)
..+..+++.-.++.-|.-.- ...+.+++++ ||+.+|||.+|..|. ...++.. .+|
T Consensus 270 ~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~K------------h~v~fivDEVQTGgGaTGk~WaHehw~l~~-PpD 336 (484)
T KOG1405|consen 270 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKK------------HGVAFIVDEVQTGGGATGKFWAHEHWNLDS-PPD 336 (484)
T ss_pred CCeEEEEeechhccCCCccCCHHHHHHHHHHHHh------------cCeEEEeeeeecCCCccCceeeehhcCCCC-Ccc
Confidence 34566777777777776544 5577777776 999999999997532 2233332 578
Q ss_pred EEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHH
Q 010538 268 FVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLIN 347 (508)
Q Consensus 268 ~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 347 (508)
.+++| |-|- - | | .+-++++ +|.-. +. ....+.|-| .-..-+...++.+.
T Consensus 337 ~vTFS--KK~q-~-g-G-ffh~~~f----rpn~p----------Yr---------ifNTWmGdP--~k~lll~~vv~~I~ 385 (484)
T KOG1405|consen 337 VVTFS--KKFQ-T-G-G-FFHDEEF----RPNEP----------YR---------IFNTWMGDP--SKNLLLEEVVQEIK 385 (484)
T ss_pred ceehh--hhhh-c-C-c-cccCccc----CCCch----------HH---------HhhhhcCCh--HHHHHHHHHHHHHh
Confidence 88877 7444 2 2 4 3334333 22200 00 001122332 23445566667665
Q ss_pred hcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCCCCCcccCCCCceEEEEeeCCCCCccCHHHHHHHHhhCCCe
Q 010538 348 SLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTYTSEVSYHDTGSMVSFNLKRPDGSWFGYREVEKLASLSGIQ 427 (508)
Q Consensus 348 ~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~L~~~gI~ 427 (508)
+ +.+.+......++|..+|.++.. ..|+ .+..-.+ |+.+++++.+..... .++...++.+|+.
T Consensus 386 ~---~~Ll~n~~~vG~~l~~gL~~Lq~--~~p~-~~~~~RG-------rGTF~a~d~ps~~~R----dk~i~~~~~nGv~ 448 (484)
T KOG1405|consen 386 R---EDLLNNVAHVGKALLKGLLELQA--KYPG-KINNLRG-------RGTFIAWDCPSGSIR----DKLILIARLNGVN 448 (484)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHH--hCch-hhhcccc-------cceEEEEeCCChHHH----HHHHHHHHHcCce
Confidence 5 56667777788888887765421 0011 1111111 488899998765322 3577888889998
Q ss_pred eccCCCCCchHHHhhcCCChhhhhhhhhcCCccCCCccccCCCCCceEEEecCCCCCHHHHHHHHHhhhhhhh
Q 010538 428 LRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAIRVSFGYMSTFEDAKVNRCSSFDFVN 500 (508)
Q Consensus 428 v~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~eev~~l~~~~~~~~~ 500 (508)
+.. | ....||+-++.--++...+-+++.+.+.++
T Consensus 449 ~GG---C------------------------------------g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 449 LGG---C------------------------------------GDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred ecc---c------------------------------------ccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 643 2 245688888877788888888888776653
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.74 E-value=0.024 Score=51.00 Aligned_cols=54 Identities=11% Similarity=0.112 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHcC----CCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEeccccc
Q 010538 83 CDIVRAAREQVLDYFN----ASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHN 139 (508)
Q Consensus 83 ~~~~~~~r~~la~~~~----~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~ 139 (508)
..+.+++.+.+.+.+| ++++ +|++|+|++.|+.+++.++ ..+|+.|+++...|+
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd--~Ivvt~Ga~~al~~l~~~l-~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDAD--MIVLSAGATAANEIIMFCI-ADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchh--heEEcCCHHHHHHHHHHHH-cCCCCEEEEeCCCCC
Confidence 3445555666666655 4677 8999999999999999999 688999999886665
No 395
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=93.38 E-value=0.043 Score=58.71 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=150.4
Q ss_pred HHHHHHHHhcccCCCCCCCCchHHHHHHhhccCCCC--CeeeeCCCCCCCCHHHHHHHHHHhh---ccccCC--CCCccc
Q 010538 5 DKEEFLKEFGEDYGYPNAPKSIDQIRATEFKRLENG--TVYLDHAGATLYSELQMEAIFRDFT---TNVYGN--PHSQSD 77 (508)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~f~~~~~~--~iyld~~~~~~~~~~~~~a~~~~~~---~~~~~~--~~~~~~ 77 (508)
+-++-|..|.+.|+.--.+..++.+|..+|-.+... ..-+++.+.+..+-.....+...-. .+...| -+..+.
T Consensus 90 ~~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~ls~~~L~~ 169 (728)
T KOG2142|consen 90 ALTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANLSEHSLFG 169 (728)
T ss_pred HHHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCcccchhcc
Confidence 345666777777766665668999998777666311 2445555544433311111100000 000000 001111
Q ss_pred hhhhhhHHHHH-HHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccc--hHHHHHHHHhcCCe
Q 010538 78 ISLATCDIVRA-AREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNS--VLGIREYALSQGAA 154 (508)
Q Consensus 78 ~~~~~~~~~~~-~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s--~~~~~~~~~~~G~~ 154 (508)
+......... .++.+-++++.+.++|-+++|.+-..+..+.+.+.+..-... ++.-..||+ +..+.+.++..|++
T Consensus 170 -g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyetgAvlv~~r~A~~~Ggk 247 (728)
T KOG2142|consen 170 -GAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYETGAVLVMNRSAELKGGK 247 (728)
T ss_pred -cchhcccccceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCchhhHHHhhhhHhhcCc
Confidence 1111111111 677788899998888899999999999999999986544444 777788886 33334445556766
Q ss_pred EEEEccCC-ccCccccccccccccccccchhhhhcCCCCCCCC--CCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCc
Q 010538 155 AFAIDVEE-AVDNDGLSESLVTSTKISLLPIQRRKGASFPERD--PAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPE 231 (508)
Q Consensus 155 v~~v~~~~-~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~--~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~ 231 (508)
+...-..+ ...+ --+.++ +.+.+.. -.+-..-+..++...-.||..+++..+.=...
T Consensus 248 t~sa~f~wp~~~l---------------~s~~lk--kr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~--- 307 (728)
T KOG2142|consen 248 TASAEFSWPMLYL---------------LSEKLK--KRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALA--- 307 (728)
T ss_pred cceeecccchHHH---------------HHHHHH--HHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHh---
Confidence 55443322 1111 012233 2221110 01112456778888999999999998873333
Q ss_pred cccccCCCCCCCeEEEEeccccCCCCCCC---CCCCCCcEEEEeccccccC--CCcceEEEEechhHhhh
Q 010538 232 RILEISPFSKGRWMVLIDAAKGCVTQPPD---LSKYPVDFVVMSFYKIFGY--PTGLGALIMRNDAAKLL 296 (508)
Q Consensus 232 ~~~~~~~~~~~g~~vivD~a~~~g~~~~d---~~~~~~D~~~~S~~K~~g~--P~G~G~l~~~~~~~~~l 296 (508)
.++.+..|+-+. |....+ +.....||...|+++.+|- |.|.|++.+++-.+-.+
T Consensus 308 ----------~~whvlLda~~l-G~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l 366 (728)
T KOG2142|consen 308 ----------NNWHVLLDALAL-GPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGL 366 (728)
T ss_pred ----------hhHHHHHhhhcc-CcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhhhhce
Confidence 699999998776 322222 2333589999999998884 56799999988775433
No 396
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=92.51 E-value=0.37 Score=48.25 Aligned_cols=206 Identities=14% Similarity=0.100 Sum_probs=102.8
Q ss_pred CChHHHHHHHHhhcC-CCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCC--cc--Cccccccccccccccccchh
Q 010538 110 SGATAALKLVGEAFP-WSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEE--AV--DNDGLSESLVTSTKISLLPI 184 (508)
Q Consensus 110 ~g~t~al~~~~~~l~-~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~--~~--~~~~l~~~~~~~~~~~~d~~ 184 (508)
-++|.|+.+...-+. +-++..|.++...-.+.. ......|+.+....... .. +++.+ ++
T Consensus 127 lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~---~if~~ag~~~~~yrYyd~~t~gld~~g~-------------le 190 (427)
T KOG1411|consen 127 LSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHK---NIFKDAGLPVKFYRYYDPKTRGLDFKGM-------------LE 190 (427)
T ss_pred ccCcchhhHHHHHHHhhccccceeecCCcccccC---ccccccCcceeeeeeccccccccchHHH-------------HH
Confidence 366667766544332 345677777763322222 22333477776664432 11 22111 34
Q ss_pred hhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccc-cCCCCCCCCCC
Q 010538 185 QRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAK-GCVTQPPDLSK 263 (508)
Q Consensus 185 ~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~-~~g~~~~d~~~ 263 (508)
++. ++- +.-.++.=...+||||.=-..+...++.+ +.++.+.+-+.|.++ ++..-.+|-..
T Consensus 191 dl~--~~p-------~gs~ilLhaCaHNPTGvDPt~eqw~ki~~---------~~~~k~~~pffDmAYQGfaSG~~d~DA 252 (427)
T KOG1411|consen 191 DLG--EAP-------EGSIILLHACAHNPTGVDPTKEQWEKISD---------LIKEKNLLPFFDMAYQGFASGDLDKDA 252 (427)
T ss_pred HHh--cCC-------CCcEEEeehhhcCCCCCCccHHHHHHHHH---------HhhhccccchhhhhhcccccCCchhhH
Confidence 444 221 22233333556899998766665444443 223378888889774 44433444322
Q ss_pred --------CCCc-EEEEeccccccCCCc--ceEEEE---echhHhhhccccccCceEEecccchhhhhhccCccccccCC
Q 010538 264 --------YPVD-FVVMSFYKIFGYPTG--LGALIM---RNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDG 329 (508)
Q Consensus 264 --------~~~D-~~~~S~~K~~g~P~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 329 (508)
.+.. +++-|+-|.+| ..| +|.+-+ +.+...+....+.- ..+.+. .
T Consensus 253 ~avR~F~~~g~~~~laQSyAKNMG-LYgERvGa~svvc~~ad~A~rV~SQlk~-------------------liRpmY-S 311 (427)
T KOG1411|consen 253 QAVRLFVEDGHEILLAQSYAKNMG-LYGERVGALSVVCKDADEAKRVESQLKI-------------------LIRPMY-S 311 (427)
T ss_pred HHHHHHHHcCCceEeehhhhhhcc-hhhhccceeEEEecCHHHHHHHHHHHHH-------------------Hhcccc-c
Confidence 2344 55669999888 666 555532 33333222211000 011111 1
Q ss_pred CCChh--HHHHHHH---H--HHHHHhcChHHHHHHHHHHHHHHHHHHhcc
Q 010538 330 TASFL--SIASIRH---G--FNLINSLTVPAICRHIASLGMYVRKVLLSL 372 (508)
Q Consensus 330 t~~~~--~~~~l~~---a--l~~~~~~g~~~i~~~~~~l~~~l~~~L~~l 372 (508)
+|+.. .+++-.- . -+|+.+ ++.+..|+..+++.|.+.|++.
T Consensus 312 nPP~hGArIv~~Il~d~~l~~~W~~e--vk~MadRi~~mR~~L~d~L~~~ 359 (427)
T KOG1411|consen 312 NPPLHGARIVATILSDPDLKNQWLGE--VKGMADRIISMRQQLFDALEKE 359 (427)
T ss_pred CCCccchhhhhhccCChHHHHHHHHH--HHHHHHhhhhhHHHHhHHhhcC
Confidence 22221 1222110 0 123333 6788899999999999999875
No 397
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=88.77 E-value=0.47 Score=45.71 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=85.2
Q ss_pred HHHHHHHhhcC-CCC-CCeEEEecccccchHHHHHHHHhcCCeEEEEc-c-CCccCccccccccccccccccchhhhhcC
Q 010538 114 AALKLVGEAFP-WSH-QSSYMYTMENHNSVLGIREYALSQGAAAFAID-V-EEAVDNDGLSESLVTSTKISLLPIQRRKG 189 (508)
Q Consensus 114 ~al~~~~~~l~-~~~-g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~-~-~~~~~~~~l~~~~~~~~~~~~d~~~l~~~ 189 (508)
+.+.+.+.++. .+| ...|+-...+.-|.+..+-. .|.+.+.|. + +++.-+ -|++.++
T Consensus 87 mslslc~~s~r~krpkakyiiw~ridqks~~ksi~~---agfepiiie~i~d~d~l~--------------tdleav~-- 147 (432)
T KOG3843|consen 87 MSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIH---AGFEPIIIENILDGDELI--------------TDLEAVE-- 147 (432)
T ss_pred ccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHh---cCCCceeeeccccchHHH--------------HhHHHHH--
Confidence 34555555552 223 35666666666665554333 377766653 2 222111 2456665
Q ss_pred CCCCCCCCCCCCceEEEEeC--CCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCC------CCC
Q 010538 190 ASFPERDPAGDAYNLFAFPS--ECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQP------PDL 261 (508)
Q Consensus 190 ~~l~~~~~~~~~t~lv~~~~--~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~------~d~ 261 (508)
+.+.+. ++. .++++.+ .+...-.-..+++|+.+|.. |+++.+|..+++.-... ---
T Consensus 148 ~~iee~---g~d-cilci~sttscfapr~pd~leaiaaica~------------~diphivnnayglqsee~i~~iaa~~ 211 (432)
T KOG3843|consen 148 AIIEEL---GED-CILCIHSTTSCFAPRSPDNLEAIAAICAA------------HDIPHIVNNAYGLQSEECIHKIAAAA 211 (432)
T ss_pred HHHHHh---CCc-eEEEEeecccccCCCCCchHHHHHHHHHc------------cCchhhhccccccchHHHHHHHHHHh
Confidence 444322 333 3333322 22222333448999999998 99999999887641100 001
Q ss_pred CCCCCcEEEEeccccccCCCcceEEEE--echhHhhhcccccc
Q 010538 262 SKYPVDFVVMSFYKIFGYPTGLGALIM--RNDAAKLLKNTYFS 302 (508)
Q Consensus 262 ~~~~~D~~~~S~~K~~g~P~G~G~l~~--~~~~~~~l~~~~~g 302 (508)
..-.+|.++-|.-|.|-.|-| |.+++ ++.++..+...++|
T Consensus 212 ~~grida~vqsldknf~vpvg-gaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 212 ECGRIDAFVQSLDKNFMVPVG-GAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred hhccHHHHHHHhhhcceeecc-hhHhhHhHHHHHHHHHHhCCC
Confidence 111479999999998887977 55553 56666666665554
No 398
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=57.65 E-value=73 Score=31.87 Aligned_cols=75 Identities=16% Similarity=0.063 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHHHHcC--CCCCCceEEEcCChHHHHHHHHhhcCCCCCC--eEEEecccccchHH--HHHHHHhcCCeE
Q 010538 82 TCDIVRAAREQVLDYFN--ASMKDYKCIFTSGATAALKLVGEAFPWSHQS--SYMYTMENHNSVLG--IREYALSQGAAA 155 (508)
Q Consensus 82 ~~~~~~~~r~~la~~~~--~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~--~vl~~~~~h~s~~~--~~~~~~~~G~~v 155 (508)
..+..+.+++.+++.-- .... ++++|.|.+.+...++... .+.+. +|++. +.+|..-+ +++.+++.|+.+
T Consensus 98 ~i~~~~~a~~~ia~~~a~~i~dg--~~IlTh~~S~~v~~~l~~A-~~~~k~~~V~Vt-ESRP~~eG~~~ak~L~~~gI~~ 173 (301)
T COG1184 98 FIDRVEKAKERIAEIGAERIHDG--DVILTHSFSKTVLEVLKTA-ADRGKRFKVIVT-ESRPRGEGRIMAKELRQSGIPV 173 (301)
T ss_pred HHHHHHHHHHHHHHHHHhhccCC--CEEEEecCcHHHHHHHHHh-hhcCCceEEEEE-cCCCcchHHHHHHHHHHcCCce
Confidence 44455566666655432 2233 6888977777766655554 23343 45544 56776543 566788889888
Q ss_pred EEEcc
Q 010538 156 FAIDV 160 (508)
Q Consensus 156 ~~v~~ 160 (508)
..|+-
T Consensus 174 ~~I~D 178 (301)
T COG1184 174 TVIVD 178 (301)
T ss_pred EEEec
Confidence 88763
No 399
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.80 E-value=2.8e+02 Score=26.65 Aligned_cols=127 Identities=7% Similarity=-0.089 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCe--EEEEccCC
Q 010538 85 IVRAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAA--AFAIDVEE 162 (508)
Q Consensus 85 ~~~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~--v~~v~~~~ 162 (508)
..-+..+.+.++++++.. |-+ ...| +..++..++..+.+.+|++.+.++.++--..++.+..|+. |..+-...
T Consensus 60 d~g~fl~~li~~~~ak~~---lel-GvfT-GySaL~~Alalp~dGrv~a~eid~~~~~~~~~~~k~agv~~KI~~i~g~a 134 (237)
T KOG1663|consen 60 DKGQFLQMLIRLLNAKRT---LEL-GVFT-GYSALAVALALPEDGRVVAIEIDADAYEIGLELVKLAGVDHKITFIEGPA 134 (237)
T ss_pred HHHHHHHHHHHHhCCceE---EEE-eccc-CHHHHHHHHhcCCCceEEEEecChHHHHHhHHHHHhccccceeeeeecch
Confidence 344566778888888643 222 2222 3334444444567889998888887765556666666643 33332221
Q ss_pred ccCccccccccccccccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC
Q 010538 163 AVDNDGLSESLVTSTKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG 242 (508)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~ 242 (508)
-. .++++. +.. ......++++.+ .-.=...-.++...+.+ .
T Consensus 135 ~e-----------------sLd~l~--~~~-----~~~tfDfaFvDa--dK~nY~~y~e~~l~Llr-------------~ 175 (237)
T KOG1663|consen 135 LE-----------------SLDELL--ADG-----ESGTFDFAFVDA--DKDNYSNYYERLLRLLR-------------V 175 (237)
T ss_pred hh-----------------hHHHHH--hcC-----CCCceeEEEEcc--chHHHHHHHHHHHhhcc-------------c
Confidence 11 133333 211 123456777765 22233355777888888 4
Q ss_pred CeEEEEeccccCC
Q 010538 243 RWMVLIDAAKGCV 255 (508)
Q Consensus 243 g~~vivD~a~~~g 255 (508)
|-++++|-+-..|
T Consensus 176 GGvi~~DNvl~~G 188 (237)
T KOG1663|consen 176 GGVIVVDNVLWPG 188 (237)
T ss_pred ccEEEEeccccCC
Confidence 9999999876665
No 400
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=42.22 E-value=1.8e+02 Score=24.13 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=53.8
Q ss_pred HHHHHHHHHHcCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccC
Q 010538 87 RAAREQVLDYFNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 87 ~~~r~~la~~~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~ 161 (508)
.+..+.+++-||.+.- =.+=+|--|+-..+++-.+ ..|++.+...|.......+++..|+.|...|.-
T Consensus 22 ~~~v~~i~~~~gI~di---N~IKPGIgEaTRvLLRRvP----~~vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~d~ 89 (100)
T PF15608_consen 22 WAEVERIAERYGISDI---NLIKPGIGEATRVLLRRVP----WKVLVRDPDDPDLAHLLLLAEEKGVPVEVYPDL 89 (100)
T ss_pred HHHHHHHHHHhCCCCc---ccccCChhHHHHHHHhcCC----CEEEECCCCCccHHHHHHHHHHcCCcEEEeCCC
Confidence 3455778999998643 2556899999998888764 688888888899888888899999999888743
No 401
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=40.76 E-value=2.1e+02 Score=28.91 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=32.6
Q ss_pred eCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCC
Q 010538 208 PSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPD 260 (508)
Q Consensus 208 ~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d 260 (508)
+.-+|..|.+++-+....+++. +-+-..+..|+|..|+.|.+.+.
T Consensus 169 P~D~~t~G~iIdDe~~r~lV~p--------lp~G~~lt~I~DSCHSGgliDlp 213 (362)
T KOG1546|consen 169 PCDHNTQGPIIDDEIFRILVRP--------LPKGCKLTAISDSCHSGGLIDLP 213 (362)
T ss_pred cccccccccccchHHHHHHHhc--------cCCCceEEEEeecccCCCcccch
Confidence 3445667888888888888886 44444567888999988876644
No 402
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=40.76 E-value=29 Score=35.14 Aligned_cols=85 Identities=18% Similarity=0.104 Sum_probs=59.4
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCCCCCCCCCCCCcEEEEecccccc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIFG 278 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~g 278 (508)
+++.+-|.+- .++|-|.+..-+.|.+..++ +.++.-+++.+++..+-|..-+... +|=++++.+=+.|
T Consensus 95 ~~~vk~vvL~-inSPGG~v~as~~i~~~l~~--------l~~~~PV~v~v~~~AASGGY~IA~a---Ad~I~a~p~si~G 162 (317)
T COG0616 95 DPSVKAVVLR-INSPGGSVVASELIARALKR--------LRAKKPVVVSVGGYAASGGYYIALA---ADKIVADPSSITG 162 (317)
T ss_pred CCCCceEEEE-EECcCCchhHHHHHHHHHHH--------HhhcCCEEEEECCeecchhhhhhcc---CCEEEecCCceee
Confidence 4566767665 47899999999998888886 4444457777776654444434443 7888888777777
Q ss_pred CCCcceEEEEechhHhhhcc
Q 010538 279 YPTGLGALIMRNDAAKLLKN 298 (508)
Q Consensus 279 ~P~G~G~l~~~~~~~~~l~~ 298 (508)
| +|++...+.+.+.+..
T Consensus 163 -S--IGVi~~~~~~~~l~~k 179 (317)
T COG0616 163 -S--IGVISGAPNFEELLEK 179 (317)
T ss_pred -e--ceeEEecCCHHHHHHh
Confidence 5 7888887776555543
No 403
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=36.40 E-value=2.1e+02 Score=30.59 Aligned_cols=161 Identities=8% Similarity=0.024 Sum_probs=92.2
Q ss_pred chhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCC-eEEEEeccccC--C-CC
Q 010538 182 LPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGR-WMVLIDAAKGC--V-TQ 257 (508)
Q Consensus 182 d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g-~~vivD~a~~~--g-~~ 257 (508)
|...++ +.|++....+.++-+++-.-..+..|...-+-.|.++|++ |. .|++.-|-.-. - ..
T Consensus 275 Dhh~fe--KiideDlaagkkPLilia~iGasi~GqnDmi~kildi~ea------------hakfWLHasGhaiAALt~ae 340 (838)
T KOG0630|consen 275 DHHLFE--KIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEA------------HAKFWLHASGHAIAALTCAE 340 (838)
T ss_pred cHHHHH--HHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHH------------hhheeEeeccchhhheeecC
Confidence 566777 6666554556666777777778888999999999999997 44 78877652211 1 11
Q ss_pred CCCCC---CCCCcEEEEeccccccCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChh
Q 010538 258 PPDLS---KYPVDFVVMSFYKIFGYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFL 334 (508)
Q Consensus 258 ~~d~~---~~~~D~~~~S~~K~~g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 334 (508)
|-+.. +...|..+...--|+|-|. .-++...+.+....... + ..+.-+ .++ .+
T Consensus 341 pnnil~HV~eqldSMal~ialWLGiPS-aPiV~LHRPleg~aaSa--------f-esdpi~-------rek-----Ld-- 396 (838)
T KOG0630|consen 341 PNNILGHVEEQLDSMALNIALWLGIPS-APIVLLHRPLEGSAASA--------F-ESDPIL-------REK-----LD-- 396 (838)
T ss_pred cccchhHHHHHHhhccchhHHHhCCCC-CceEEeecccccccchh--------c-ccChHH-------HHh-----hc--
Confidence 11111 1124566666566898664 55555554431100000 0 000000 011 11
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEecCC
Q 010538 335 SIASIRHGFNLINSLTVPAICRHIASLGMYVRKVLLSLRHENGADVCTIYGTY 387 (508)
Q Consensus 335 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~~~~~~~~~~~~~~~ 387 (508)
...++.++..+...-+.++......+.+.+.+.+.+. +++++++-.
T Consensus 397 -aLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~------~eiemig~d 442 (838)
T KOG0630|consen 397 -ALPLWTALQALGGKAIADMIENAFLLCKILFEGASAC------EEIEMIGHD 442 (838)
T ss_pred -cchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcC------CceeEeccC
Confidence 2344556666554445666677778889999999887 478877643
No 404
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=32.31 E-value=1.6e+02 Score=29.62 Aligned_cols=56 Identities=16% Similarity=0.061 Sum_probs=31.1
Q ss_pred eEEEcCChHH-HHHHHHhhcCCCCCCeEEEecccccchH--HHHHHHHhcCCeEEEEccC
Q 010538 105 KCIFTSGATA-ALKLVGEAFPWSHQSSYMYTMENHNSVL--GIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 105 ~i~~t~g~t~-al~~~~~~l~~~~g~~vl~~~~~h~s~~--~~~~~~~~~G~~v~~v~~~ 161 (508)
++++|.|.+. +...+..+......-+|++. +..|..- ...+.+...|+.+..|+..
T Consensus 122 ~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~-EsrP~~~G~~~a~~L~~~GI~vtlI~Ds 180 (310)
T PRK08535 122 DVIMTHCNSSAALSVIKTAHEQGKDIEVIAT-ETRPRNQGHITAKELAEYGIPVTLIVDS 180 (310)
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEe-cCCchhhHHHHHHHHHHCCCCEEEEehh
Confidence 5777765444 44445444422223345555 4455432 3445566789999988754
No 405
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=30.87 E-value=1.9e+02 Score=29.04 Aligned_cols=56 Identities=14% Similarity=0.055 Sum_probs=30.7
Q ss_pred eEEEcCChHH-HHHHHHhhcCCCCCCeEEEecccccch--HHHHHHHHhcCCeEEEEccC
Q 010538 105 KCIFTSGATA-ALKLVGEAFPWSHQSSYMYTMENHNSV--LGIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 105 ~i~~t~g~t~-al~~~~~~l~~~~g~~vl~~~~~h~s~--~~~~~~~~~~G~~v~~v~~~ 161 (508)
++++|.|.+. +...+..+......-.|++.+ ..|.. ....+.+...|+.+..|+..
T Consensus 117 ~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~E-srP~~~G~~~a~~L~~~gI~vtlI~Ds 175 (301)
T TIGR00511 117 DVVMTHCNSEAALSVIKTAFEQGKDIEVIATE-TRPRKQGHITAKELRDYGIPVTLIVDS 175 (301)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCcEEEEEec-CCCcchHHHHHHHHHHCCCCEEEEehh
Confidence 5777765444 444444444222233555553 44543 23455566789999988743
No 406
>PRK07708 hypothetical protein; Validated
Probab=28.06 E-value=3.8e+02 Score=25.49 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=60.0
Q ss_pred CCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC-CeEEEEeccccCCCCCCCCCCCCCcEEEEeccccc
Q 010538 199 GDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG-RWMVLIDAAKGCVTQPPDLSKYPVDFVVMSFYKIF 277 (508)
Q Consensus 199 ~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~-g~~vivD~a~~~g~~~~d~~~~~~D~~~~S~~K~~ 277 (508)
+++++-+.+.-- .|....++++.++.++ +..+. .+.+.+||+... .-
T Consensus 39 ~~~~~~~~~~d~---~~~~~~~k~~~~~~~~--------~~~ep~~~~vY~DGs~~~---------------------n~ 86 (219)
T PRK07708 39 TGRVKELEFYDE---MDTEWSLKELKKLSKE--------VEEEPHEILVYFDGGFDK---------------------ET 86 (219)
T ss_pred cCCceeEEEecC---CCCEeeHHHHhhhhhh--------hccCCCcEEEEEeeccCC---------------------CC
Confidence 566676666543 6888999999999987 55554 477778885411 12
Q ss_pred cCCCcceEEEEechhHhhhccccccCceEEecccchhhhhhccCccccccCCCCChhHHHHHHHHHHHHHhcChH
Q 010538 278 GYPTGLGALIMRNDAAKLLKNTYFSGGTVAASIADIDFVKRRQGVEELFEDGTASFLSIASIRHGFNLINSLTVP 352 (508)
Q Consensus 278 g~P~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 352 (508)
+ +.|.|+++..+.-..... . ... .......|.|.+-+.++..+++...+.|+.
T Consensus 87 g-~aG~GvVI~~~~g~~~~~-~-~~~-------------------~~l~~~~TNN~AEy~Ali~aL~~A~e~g~~ 139 (219)
T PRK07708 87 K-LAGLGIVIYYKQGNKRYR-I-RRN-------------------AYIEGIYDNNEAEYAALYYAMQELEELGVK 139 (219)
T ss_pred C-CcEEEEEEEECCCCEEEE-E-Eee-------------------ccccccccCcHHHHHHHHHHHHHHHHcCCC
Confidence 3 667888887543210000 0 000 000113467777888888888877766643
No 407
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=26.14 E-value=62 Score=33.67 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=63.4
Q ss_pred cCCCCCCceEEEcCChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEccCCccCccccccccccc
Q 010538 97 FNASMKDYKCIFTSGATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDVEEAVDNDGLSESLVTS 176 (508)
Q Consensus 97 ~~~~~~~~~i~~t~g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~~~~~~~~~l~~~~~~~ 176 (508)
+|++.- -+-++ |-.++=..+...+.....+.-++....||++....-++ ..-++..++.++....+. .
T Consensus 63 LGa~a~--l~Gvv-G~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s--~nQQllRvD~Ee~~~~~~-------~ 130 (467)
T COG2870 63 LGANAY--LVGVV-GKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLS--RNQQLLRLDFEEKFPIED-------E 130 (467)
T ss_pred cCCCEE--EEEee-ccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeec--ccceEEEecccccCcchh-------H
Confidence 566543 33333 44444444444443333344455556777765442222 223455555443222110 0
Q ss_pred cccccchhhhhcCCCCCCCCCCCCCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEe
Q 010538 177 TKISLLPIQRRKGASFPERDPAGDAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLID 249 (508)
Q Consensus 177 ~~~~~d~~~l~~~~~l~~~~~~~~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD 249 (508)
+. -.+.++ ++| ++.++++++- +--|...+++.+.++|++ .|++|++|
T Consensus 131 ~~---ll~~~~--~~l-------~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~------------~~~pVLvD 177 (467)
T COG2870 131 NK---LLEKIK--NAL-------KSFDALVLSD--YAKGVLTNVQKMIDLARE------------AGIPVLVD 177 (467)
T ss_pred HH---HHHHHH--HHh-------hcCCEEEEec--cccccchhHHHHHHHHHH------------cCCcEEEC
Confidence 11 134444 333 3457777774 567999999999999998 99999999
No 408
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=25.77 E-value=6.2e+02 Score=24.53 Aligned_cols=42 Identities=5% Similarity=-0.122 Sum_probs=28.3
Q ss_pred CCceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCCCeEEEEeccccCCC
Q 010538 200 DAYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKGRWMVLIDAAKGCVT 256 (508)
Q Consensus 200 ~~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~g~~vivD~a~~~g~ 256 (508)
....+|++.+. ......-.+.+..+.+ .|.+|++|.+..-|.
T Consensus 155 ~~fD~iFiDad--K~~Y~~y~~~~l~ll~-------------~GGviv~DNvl~~G~ 196 (247)
T PLN02589 155 GTFDFIFVDAD--KDNYINYHKRLIDLVK-------------VGGVIGYDNTLWNGS 196 (247)
T ss_pred CcccEEEecCC--HHHhHHHHHHHHHhcC-------------CCeEEEEcCCCCCCc
Confidence 45788998864 4444444556666666 488899998876554
No 409
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=23.80 E-value=2.8e+02 Score=27.19 Aligned_cols=73 Identities=12% Similarity=0.020 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHcC--CCCCCceEEEcCChHHHHHHHHhhcCCCCC--CeEEEecccccchH--HHHHHHHhcCCeEEEEc
Q 010538 86 VRAAREQVLDYFN--ASMKDYKCIFTSGATAALKLVGEAFPWSHQ--SSYMYTMENHNSVL--GIREYALSQGAAAFAID 159 (508)
Q Consensus 86 ~~~~r~~la~~~~--~~~~~~~i~~t~g~t~al~~~~~~l~~~~g--~~vl~~~~~h~s~~--~~~~~~~~~G~~v~~v~ 159 (508)
...+++.+++..- .+.. ++++|-|.+..+..++... .+.| -+|++.+ ..|..- .+++.+...|+.+..++
T Consensus 90 ~~~~~~~I~~~~~~~I~~~--~~ILT~~~S~~v~~~l~~a-~~~~~~~~V~v~e-s~P~~eG~~~a~~L~~~gi~v~~i~ 165 (282)
T PF01008_consen 90 IEQAREKIADHASELINDG--DTILTHGYSSTVERFLLSA-KKKGKKFRVIVLE-SRPYNEGRLMAKELAEAGIPVTLIP 165 (282)
T ss_dssp HHHHHHHHHHHHHCCC-TT--EEEEEES--SHHHHHHHHH-HHTTEEEEEEEE---TTTTHHHTHHHHHHHTT-EEEEE-
T ss_pred HHHHHHHHHHHHHHhccCC--eEEEEeCCchHHHHHHHHH-HHcCCeEEEEEcc-CCcchhhhhHHHHhhhcceeEEEEe
Confidence 4444455544322 2444 6888877776665554443 2333 3455553 444433 25566677899999988
Q ss_pred cCC
Q 010538 160 VEE 162 (508)
Q Consensus 160 ~~~ 162 (508)
...
T Consensus 166 d~~ 168 (282)
T PF01008_consen 166 DSA 168 (282)
T ss_dssp GGG
T ss_pred chH
Confidence 643
No 410
>PF02686 Glu-tRNAGln: Glu-tRNAGln amidotransferase C subunit; InterPro: IPR003837 Glu-tRNAGln amidotransferase is a heterotrimeric enzyme that is required for correct decoding of glutamine codons during translation. The Glu-tRNA Gln amidotransferase enzyme is an important translational fidelity mechanism replacing incorrectly charged Glu-tRNAGln with the correct Gln-tRANGln via transmidation of the misacylated Glu-tRNAGln []. This activity supplements the lack of glutaminyl-tRNA synthetase activity in Gram-positive eubacteria, cyanobacteria, archaea, and organelles [].; GO: 0006450 regulation of translational fidelity; PDB: 2DQN_C 3IP4_C 2G5I_C 2F2A_C 2G5H_C 2DF4_C 3AL0_C 3KFU_G 3H0R_I 3H0L_U ....
Probab=23.40 E-value=82 Score=23.80 Aligned_cols=24 Identities=17% Similarity=0.131 Sum_probs=20.6
Q ss_pred CHHHHHHHHHhhhhhhhhhhhccC
Q 010538 484 TFEDAKVNRCSSFDFVNFSQFLNS 507 (508)
Q Consensus 484 t~eev~~l~~~~~~~~~~~~~~~~ 507 (508)
|++|++.+..-+.++++|++.|+.
T Consensus 2 ~eeE~~~~~~~l~~il~~~~~l~~ 25 (72)
T PF02686_consen 2 TEEELEKLTKQLNDILDYVEKLQE 25 (72)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhh
Confidence 689999999999999999888763
No 411
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=21.47 E-value=6.7e+02 Score=24.79 Aligned_cols=56 Identities=16% Similarity=0.060 Sum_probs=29.9
Q ss_pred eEEEcCChH-HHHHHHHhhcCCCCCCeEEEecccccchH--HHHHHHHhcCCeEEEEccC
Q 010538 105 KCIFTSGAT-AALKLVGEAFPWSHQSSYMYTMENHNSVL--GIREYALSQGAAAFAIDVE 161 (508)
Q Consensus 105 ~i~~t~g~t-~al~~~~~~l~~~~g~~vl~~~~~h~s~~--~~~~~~~~~G~~v~~v~~~ 161 (508)
++++|.|.+ .++..+..+......-+|++. +..|..- .....+...|+.+..|+-.
T Consensus 111 ~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~-EsrP~~qG~~la~eL~~~GI~vtlI~Ds 169 (275)
T PRK08335 111 DVIITHSFSSAVLEILKTAKRKGKRFKVILT-ESAPDYEGLALANELEFLGIEFEVITDA 169 (275)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCceEEEEe-cCCCchhHHHHHHHHHHCCCCEEEEecc
Confidence 467775544 455555555422222345544 4455332 2344566679998888643
No 412
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=20.83 E-value=8e+02 Score=25.58 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=44.2
Q ss_pred CceEEEEeCCCCCCccccCHHHHHHHHcCCccccccCCCCCC---CeEEEEeccccCCCCCCCCC-------CCCCcEEE
Q 010538 201 AYNLFAFPSECNFSGSRFNLDLINIMKKNPERILEISPFSKG---RWMVLIDAAKGCVTQPPDLS-------KYPVDFVV 270 (508)
Q Consensus 201 ~t~lv~~~~~~n~tG~~~~i~~i~~l~~~~~~~~~~~~~~~~---g~~vivD~a~~~g~~~~d~~-------~~~~D~~~ 270 (508)
+.+.+.+.| .|++.+.+++++ +++. ..+|++|+++++.-.-.++. ++++=.++
T Consensus 144 ~a~~~~f~H--------nD~~~Le~~l~~---------~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~V 206 (388)
T COG0156 144 RAEVRRFKH--------NDLDHLEALLEE---------ARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYV 206 (388)
T ss_pred CCcEEEecC--------CCHHHHHHHHHh---------hhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEE
Confidence 457777777 478888888875 1112 59999999999854434443 22444555
Q ss_pred Eeccc--cccCCCcceEE
Q 010538 271 MSFYK--IFGYPTGLGAL 286 (508)
Q Consensus 271 ~S~~K--~~g~P~G~G~l 286 (508)
=-.|= .+| |.|-|++
T Consensus 207 DEAHa~Gv~G-~~GrG~~ 223 (388)
T COG0156 207 DEAHAVGVLG-PNGRGLA 223 (388)
T ss_pred EccccccccC-CCCccHH
Confidence 56666 566 8776665
No 413
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=20.62 E-value=3.2e+02 Score=26.34 Aligned_cols=81 Identities=7% Similarity=-0.043 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhhcCCCCCCeEEEecccccchHHHHHHHHhcCCeEEEEcc---CCccCccccccccccccccccchhhhh
Q 010538 111 GATAALKLVGEAFPWSHQSSYMYTMENHNSVLGIREYALSQGAAAFAIDV---EEAVDNDGLSESLVTSTKISLLPIQRR 187 (508)
Q Consensus 111 g~t~al~~~~~~l~~~~g~~vl~~~~~h~s~~~~~~~~~~~G~~v~~v~~---~~~~~~~~l~~~~~~~~~~~~d~~~l~ 187 (508)
.++.|+..++..+. -...-++++..-.-.....++++..|++|..+.. ..+..+-.+ +++.+.
T Consensus 106 t~~~A~~~AL~alg--~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i------------~p~~i~ 171 (239)
T TIGR02990 106 TPSSAAVDGLAALG--VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARI------------SPDCIV 171 (239)
T ss_pred CHHHHHHHHHHHcC--CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeec------------CHHHHH
Confidence 44457777888772 2344455543332334456678889999887732 222223222 567766
Q ss_pred cCCCCCCCCCCCCCceEEEEeC
Q 010538 188 KGASFPERDPAGDAYNLFAFPS 209 (508)
Q Consensus 188 ~~~~l~~~~~~~~~t~lv~~~~ 209 (508)
+++.+. ..+....|+++.
T Consensus 172 --~~~~~~--~~~~aDAifisC 189 (239)
T TIGR02990 172 --EAALAA--FDPDADALFLSC 189 (239)
T ss_pred --HHHHHh--cCCCCCEEEEeC
Confidence 554322 245667777764
Done!