Your job contains 1 sequence.
>010539
MGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKV
VIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMI
FAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVE
AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSK
MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAY
VFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLL
SVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQS
KAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK
LCAQAIVQDYVLLAARGKGRLAEASMCP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010539
(508 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129515 - symbol:PDS3 "phytoene desaturase 3" ... 1946 5.1e-234 2
TAIR|locus:2114789 - symbol:ZDS "zeta-carotene desaturase... 294 3.9e-29 2
TAIR|locus:2077670 - symbol:PAO3 "polyamine oxidase 3" sp... 136 9.6e-10 2
TAIR|locus:2018571 - symbol:PAO4 "polyamine oxidase 4" sp... 125 6.8e-08 2
TAIR|locus:2053723 - symbol:PAO2 "AT2G43020" species:3702... 120 3.7e-07 2
TIGR_CMR|SPO_3597 - symbol:SPO_3597 "amine oxidase, flavi... 85 0.00014 2
UNIPROTKB|Q81RW3 - symbol:BAS1785 "Amine oxidase, flavin-... 93 0.00019 2
TIGR_CMR|BA_1924 - symbol:BA_1924 "amine oxidase, flavin-... 93 0.00019 2
UNIPROTKB|O69694 - symbol:Rv3727 "Oxidoreductase" species... 89 0.00019 3
RGD|2321736 - symbol:LOC100360621 "rCG53598-like" species... 125 0.00020 1
ZFIN|ZDB-GENE-030131-9110 - symbol:wu:fa99f01 "wu:fa99f01... 114 0.00042 2
UNIPROTKB|F1RHU4 - symbol:IL4I1 "Uncharacterized protein"... 121 0.00047 1
>TAIR|locus:2129515 [details] [associations]
symbol:PDS3 "phytoene desaturase 3" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA;TAS] [GO:0009536 "plastid" evidence=IEA]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IDA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016705
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0016120 "carotene biosynthetic process"
evidence=IDA] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
InterPro:IPR014102 Pfam:PF01593 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97335 EMBL:AL161538 GO:GO:0009941
GO:GO:0009534 GO:GO:0016117 GO:GO:0016705 GO:GO:0009509
GO:GO:0016166 EMBL:L16237 EMBL:AF360196 EMBL:AY040007
IPI:IPI00523820 PIR:F71403 RefSeq:NP_193157.1 UniGene:At.247
ProteinModelPortal:Q07356 SMR:Q07356 STRING:Q07356 PaxDb:Q07356
PRIDE:Q07356 EnsemblPlants:AT4G14210.1 GeneID:827061
KEGG:ath:AT4G14210 TAIR:At4g14210 eggNOG:COG3349
HOGENOM:HOG000150110 InParanoid:Q07356 KO:K02293 PhylomeDB:Q07356
ProtClustDB:PLN02612 Genevestigator:Q07356 TIGRFAMs:TIGR02731
Uniprot:Q07356
Length = 566
Score = 1946 (690.1 bits), Expect = 5.1e-234, Sum P(2) = 5.1e-234
Identities = 360/416 (86%), Positives = 399/416 (95%)
Query: 91 VLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAIL 150
+ GAYPN+QNLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDFP+VLPAPLNGI AIL
Sbjct: 148 IFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAIL 207
Query: 151 RNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSK 210
RNNEMLTWPEK+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQGVP+RVT EVFIAMSK
Sbjct: 208 RNNEMLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSK 267
Query: 211 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 270
ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LN
Sbjct: 268 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLN 327
Query: 271 SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLV 330
SR++KIELNDDGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLV
Sbjct: 328 SRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLV 387
Query: 331 GVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEE 390
GVPVIN+HIWFDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SMLELVFAPAEE
Sbjct: 388 GVPVINVHIWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEE 447
Query: 391 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 450
WIS +DS+IIDATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQ
Sbjct: 448 WISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQ 507
Query: 451 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
RSP+EGFYLAGDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G +L+EA++
Sbjct: 508 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
Score = 334 (122.6 bits), Expect = 5.1e-234, Sum P(2) = 5.1e-234
Identities = 68/92 (73%), Positives = 79/92 (85%)
Query: 3 QSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVI 62
Q+LK R + + G P +VVCVD PRP+++NT NFLEAA LS+SFR++PRP+KPLKVVI
Sbjct: 40 QALKTRTRRRSTAG--PLQVVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVI 97
Query: 63 AGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
AGAGLAGLSTAKYLADAGHKPLLLEARDVL G
Sbjct: 98 AGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 129
>TAIR|locus:2114789 [details] [associations]
symbol:ZDS "zeta-carotene desaturase" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016719
"carotene 7,8-desaturase activity" evidence=IEA;IDA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016120 "carotene biosynthetic process"
evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
InterPro:IPR014103 Pfam:PF01593 InterPro:IPR016040 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009941 EMBL:AC009465 GO:GO:0016117 GO:GO:0009509
UniGene:At.24092 UniGene:At.71000 eggNOG:COG3349
HOGENOM:HOG000150110 EMBL:U38550 EMBL:AF121947 EMBL:AY059920
EMBL:AY072096 EMBL:AY096583 IPI:IPI00541621 RefSeq:NP_187138.1
RefSeq:NP_974222.1 ProteinModelPortal:Q38893 SMR:Q38893
STRING:Q38893 PaxDb:Q38893 PRIDE:Q38893 DNASU:819647
EnsemblPlants:AT3G04870.1 EnsemblPlants:AT3G04870.2 GeneID:819647
KEGG:ath:AT3G04870 TAIR:At3g04870 InParanoid:Q38893 KO:K00514
OMA:DGNHIEM PhylomeDB:Q38893 ProtClustDB:PLN02487
BioCyc:ARA:AT3G04870-MONOMER BioCyc:MetaCyc:AT3G04870-MONOMER
Genevestigator:Q38893 GO:GO:0052887 GO:GO:0052886 GO:GO:0016719
GO:GO:0052889 TIGRFAMs:TIGR02732 Uniprot:Q38893
Length = 558
Score = 294 (108.6 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 74/235 (31%), Positives = 123/235 (52%)
Query: 290 TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHI----WFD--- 342
TN ++ D YV A V +K LP+ W+E +F + +L GVPV+ + + W
Sbjct: 323 TNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQ 382
Query: 343 -----RKLKNTY--DHLLFSRSSLLSVYADMSLTCK-EYYNPNQ-SMLELVFAPAEEWIS 393
R+LK D+LL++ + S +AD++L +YY Q ++L+ V P + ++
Sbjct: 383 DIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMR 442
Query: 394 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSP 453
+ +II+ ++ +LFP + + + VVK +S+Y+ P +P RP Q++P
Sbjct: 443 MPNDKIIEKVAMQVTELFPSSRGLEVTWSS-----VVKIAQSLYREAPGKDPFRPDQKTP 497
Query: 454 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 508
++ F+LAG YTKQ Y+ SMEGA LSG+ + I LA K + A+ P
Sbjct: 498 IKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSATAVP 552
Score = 260 (96.6 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
Identities = 72/266 (27%), Positives = 126/266 (47%)
Query: 91 VLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAIL 150
V G Y N+ L ++G L K+H+ F NK G DF + AP++GI A L
Sbjct: 112 VFFGCYNNLFRLMKKVGAEKNLLVKDHTHTFI--NKDGTIGELDFRFPVGAPIHGIRAFL 169
Query: 151 RNNEMLTWPE-KVKFAIGLLP---AII---GGQAYVEAQDGLTVQEWMRKQGVPDRVTTE 203
N++ + + + A+ L P A++ G + D ++ +W +G
Sbjct: 170 VTNQLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQR 229
Query: 204 VFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSL 263
++ ++ AL FI+ D +S +C+L + F + S + L G+P L PI ++I
Sbjct: 230 MWDPVAYALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDR 289
Query: 264 GGEVRLNSRVQKI--ELNDDGT--VKNFLL---TNGNVIDGDAYVFATPVDILKLQLPEN 316
GG + L ++I + + DG V + TN ++ D YV A V +K LP+
Sbjct: 290 GGRIHLRWGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKE 349
Query: 317 WKEMAYFKRLEKLVGVPVINIHIWFD 342
W+E +F + +L GVPV+ + + ++
Sbjct: 350 WRESRFFNDIYELEGVPVVTVQLRYN 375
Score = 96 (38.9 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 27 YPRPDIDNTSNFLEAAYLSSSFRTSPRPSK-P-LKVVIAGAGLAGLSTAKYLADAGHKPL 84
Y +D+ + + F P P K P LKV I GAGLAG+STA L D GH+
Sbjct: 24 YVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVD 83
Query: 85 LLEARDVL---VGAYPNIQNLFGELGIN 109
+ ++R + VG++ + + E+G++
Sbjct: 84 IYDSRTFIGGKVGSFVDRRGNHIEMGLH 111
>TAIR|locus:2077670 [details] [associations]
symbol:PAO3 "polyamine oxidase 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0006598 "polyamine
catabolic process" evidence=RCA;IDA] [GO:0046592 "polyamine oxidase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009698 "phenylpropanoid metabolic process" evidence=RCA]
[GO:0009805 "coumarin biosynthetic process" evidence=RCA]
[GO:0042398 "cellular modified amino acid biosynthetic process"
evidence=RCA] InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593
PRINTS:PR00757 UniPathway:UPA00211 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005777 EMBL:AL163527 GO:GO:0006598
eggNOG:COG1231 KO:K13367 GO:GO:0052904 GO:GO:0052903 GO:GO:0046592
GO:GO:0052902 GO:GO:0052901 GO:GO:0046208 HSSP:P50264
HOGENOM:HOG000037651 ProtClustDB:PLN02268 EMBL:AY065025
EMBL:AY143905 EMBL:AY085634 IPI:IPI00545156 PIR:T47787
RefSeq:NP_191464.1 UniGene:At.27590 ProteinModelPortal:Q9LYT1
SMR:Q9LYT1 IntAct:Q9LYT1 PRIDE:Q9LYT1 EnsemblPlants:AT3G59050.1
GeneID:825074 KEGG:ath:AT3G59050 TAIR:At3g59050 InParanoid:Q9LYT1
OMA:DVGCGWL PhylomeDB:Q9LYT1 BioCyc:ARA:AT3G59050-MONOMER
BioCyc:MetaCyc:AT3G59050-MONOMER Genevestigator:Q9LYT1
Uniprot:Q9LYT1
Length = 488
Score = 136 (52.9 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 56/246 (22%), Positives = 104/246 (42%)
Query: 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 314
P++ + S G ++RL+ R+ KI G VK G+ DA V A P+ +LK +
Sbjct: 230 PVINTL-SKGLDIRLSHRITKISRRYSG-VK-VTTEKGDTFVADAAVIALPLGVLKSGM- 285
Query: 315 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYY 374
+ + +L + + ++ + + K+ +D++ + L V A+ S C +
Sbjct: 286 -----ITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFL 340
Query: 375 NPNQSMLE--LVFAPAEEWI----SCSDSEIIDATMKELAKLFPDEIS----------AD 418
N +++ LV+ PA + SD + +L K+ PD S +D
Sbjct: 341 NLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSD 400
Query: 419 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 478
+ Y +V P +Y+ + R P++ + AG+ T Y S+ GA +
Sbjct: 401 INSLGSYSYDIVNKPHDLYERL----------RVPLDNLFFAGEATSSSYPGSVHGAYST 450
Query: 479 GKLCAQ 484
G L A+
Sbjct: 451 GVLAAE 456
Score = 82 (33.9 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 35 TSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
T+ L A S+ + P V++ G G+AG+S A+ L DA + ++LE+RD + G
Sbjct: 7 TNRQLRKAICVSTDEKMKKKRSP-SVIVIGGGMAGISAARTLQDASFQVVVLESRDRIGG 65
>TAIR|locus:2018571 [details] [associations]
symbol:PAO4 "polyamine oxidase 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008131 "primary amine oxidase activity" evidence=ISS]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0006598 "polyamine
catabolic process" evidence=RCA;IDA;IMP] [GO:0046592 "polyamine
oxidase activity" evidence=IDA] [GO:0055114 "oxidation-reduction
process" evidence=IDA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009698 "phenylpropanoid metabolic process"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0042398 "cellular modified amino acid
biosynthetic process" evidence=RCA] InterPro:IPR001613
InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757 InterPro:IPR016040
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005777 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006598 eggNOG:COG1231 EMBL:AC007234
GO:GO:0046592 GO:GO:0052901 GO:GO:0052895 GO:GO:0052894 HSSP:P50264
HOGENOM:HOG000037651 ProtClustDB:PLN02268 EMBL:AF364953
EMBL:AF370508 EMBL:BT000353 IPI:IPI00526751 PIR:D96682
RefSeq:NP_176759.1 UniGene:At.16379 ProteinModelPortal:Q8H191
SMR:Q8H191 STRING:Q8H191 PaxDb:Q8H191 EnsemblPlants:AT1G65840.1
GeneID:842894 KEGG:ath:AT1G65840 TAIR:At1g65840 InParanoid:Q8H191
OMA:GARWLHN PhylomeDB:Q8H191 BioCyc:ARA:AT1G65840-MONOMER
BioCyc:MetaCyc:AT1G65840-MONOMER Genevestigator:Q8H191
Uniprot:Q8H191
Length = 497
Score = 125 (49.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 52/234 (22%), Positives = 95/234 (40%)
Query: 266 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 325
++RLN RV K+ + V + G DA + P+ +LK L + E+ +K
Sbjct: 240 DIRLNHRVTKVVRTSNNKVI-VAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKT 298
Query: 326 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE--L 383
+ G+ V N + K+ +D + L + A S C + N +++ L
Sbjct: 299 -SAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352
Query: 384 VFAPA----EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VY 437
V+ A ++ SD + M +L K+FPD + D ++ + ++ Y
Sbjct: 353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPD--APDPAQYLVTRWGTDPNTLGCYAY 410
Query: 438 KTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 491
+ E P PV+ + G+ ++ S GA L+G +Q Q Y+
Sbjct: 411 DVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNC-QRYI 463
Score = 76 (31.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 60 VVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
V++ G+G++GL+ A+ L++A K +LE+RD + G
Sbjct: 31 VIVIGSGISGLAAARNLSEASFKVTVLESRDRIGG 65
>TAIR|locus:2053723 [details] [associations]
symbol:PAO2 "AT2G43020" species:3702 "Arabidopsis
thaliana" [GO:0008131 "primary amine oxidase activity"
evidence=ISS] [GO:0006598 "polyamine catabolic process"
evidence=IDA] [GO:0046592 "polyamine oxidase activity"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0006598
eggNOG:COG1231 GO:GO:0046592 EMBL:AF364952 EMBL:AC006224
EMBL:AY074846 EMBL:BT029025 IPI:IPI00523923 PIR:A84861
RefSeq:NP_181830.1 UniGene:At.27901 HSSP:P50264
ProteinModelPortal:Q9SKX5 SMR:Q9SKX5 PRIDE:Q9SKX5
EnsemblPlants:AT2G43020.1 GeneID:818904 KEGG:ath:AT2G43020
TAIR:At2g43020 HOGENOM:HOG000037651 InParanoid:Q9SKX5 OMA:DKEWIGM
PhylomeDB:Q9SKX5 ProtClustDB:PLN02268 Genevestigator:Q9SKX5
Uniprot:Q9SKX5
Length = 490
Score = 120 (47.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 61/253 (24%), Positives = 107/253 (42%)
Query: 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL--- 311
P++ + G ++R+ RV KI +G VK NG DA V A P+ +LK
Sbjct: 229 PVINTLAK-GLDIRVGHRVTKIVRRYNG-VK-VTTENGQTFVADAAVIAVPLGVLKSGTI 285
Query: 312 ----QLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMS 367
+LPE WK+ A + L GV + N K+ ++ + + + L V A+ S
Sbjct: 286 KFEPKLPE-WKQEA----INDL-GVGIEN-------KIILHFEKVFWPKVEFLGVVAETS 332
Query: 368 LTCKEYYNPNQSMLE--LVFAPAEEWIS----CSDSEIIDATMKELAKLFPDEI------ 415
C + N +++ LV+ PA + SD + + +L ++ PD +
Sbjct: 333 YGCSYFLNLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYL 392
Query: 416 ----SADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLAS 471
+D + Y +V P +Y+ + R PV+ + AG+ T + S
Sbjct: 393 VSRWGSDVNSMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGS 442
Query: 472 MEGAVLSGKLCAQ 484
+ GA +G + A+
Sbjct: 443 VHGAYSTGLMAAE 455
Score = 74 (31.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 60 VVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
V++ G G G+S A+ L DA + ++LE+RD + G
Sbjct: 30 VIVIGGGFGGISAARTLQDASFQVMVLESRDRIGG 64
>TIGR_CMR|SPO_3597 [details] [associations]
symbol:SPO_3597 "amine oxidase, flavin-containing"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008131 "primary amine
oxidase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593
PRINTS:PR00757 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491
InterPro:IPR006311 PROSITE:PS51318 HOGENOM:HOG000037651
RefSeq:YP_168792.1 ProteinModelPortal:Q5LMG6 GeneID:3196252
KEGG:sil:SPO3597 PATRIC:23380671 OMA:GRADRIW Uniprot:Q5LMG6
Length = 449
Score = 85 (35.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 55 SKPL-KVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
S+P ++++ GAGLAGLS A+ L DAG +++AR + G
Sbjct: 29 SQPQDRILVVGAGLAGLSAARILRDAGRNVTVIDARSRIGG 69
Score = 85 (35.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 59/237 (24%), Positives = 101/237 (42%)
Query: 264 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 323
G ++RL++ V I G V+ L +G+ ID DA V P+ +L+ + +A
Sbjct: 225 GIDIRLSAEVTGIA---PGHVR---LADGSRIDADAIVCTVPLGVLQSGRIRFAEPLAQ- 277
Query: 324 KRLE--KLVGVPVINIHIW--FDR-KLKNTYDHL--LFSRSSLLSVYADMSLTCKEYYNP 376
KRL + + + ++N W FD + D + L R L + ++ T + P
Sbjct: 278 KRLAATRSLRMGLLN-KCWLRFDGIHWPDDVDWIGWLGPRPGLWGEWVSLARTLRA---P 333
Query: 377 NQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSV 436
A A E SD + + A ++ L +F A ++ A+I ++ +
Sbjct: 334 VLVGFNAADA-ATEVEGLSDRDTVAAALEALRSMFGARFPAPRA-AQITRWGQDRHAFGS 391
Query: 437 YKTIPNCEPCRPLQRSPVEG------FYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 487
Y N RP R+ + G + AG+ T Y + GAVLSG+ A+ I+
Sbjct: 392 YSY--NAVGSRPSTRTELAGPDWDGSIWFAGEATSAPYFGTAHGAVLSGRAAAEGIL 446
>UNIPROTKB|Q81RW3 [details] [associations]
symbol:BAS1785 "Amine oxidase, flavin-containing"
species:1392 "Bacillus anthracis" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593
PRINTS:PR00757 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016491 KO:K00274 HSSP:P81382
HOGENOM:HOG000088141 OMA:EVQPYHL RefSeq:NP_844333.1
RefSeq:YP_018569.1 RefSeq:YP_028049.1 ProteinModelPortal:Q81RW3
DNASU:1085964 EnsemblBacteria:EBBACT00000009767
EnsemblBacteria:EBBACT00000014669 EnsemblBacteria:EBBACT00000020792
GeneID:1085964 GeneID:2815133 GeneID:2850031 KEGG:ban:BA_1924
KEGG:bar:GBAA_1924 KEGG:bat:BAS1785 ProtClustDB:CLSK887401
BioCyc:BANT260799:GJAJ-1854-MONOMER
BioCyc:BANT261594:GJ7F-1928-MONOMER Uniprot:Q81RW3
Length = 478
Score = 93 (37.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLF 103
+ P +++I GAG++GL A L +AGHK +LEA + + G I+ F
Sbjct: 20 KTKNPKQIIIVGAGISGLVAASLLKEAGHKVTILEANNRIGGRIYTIREPF 70
Score = 76 (31.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 48/225 (21%), Positives = 94/225 (41%)
Query: 267 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR- 325
++ NS+V I++N + T++ F++T GD + P L+ + + +Y+KR
Sbjct: 258 IQENSKVM-IQVNHEQTIERFMVT------GDVAIVTIPFSALRFVEIQPYNLFSYYKRR 310
Query: 326 -LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEY--YNPNQSMLE 382
+ +L + I I F + + S+ + + Y + P + +
Sbjct: 311 AIRELNYIAATKIAIEFKSRFWEKAGQ--YGGKSITDLPIRFTYY-PSYGIHTPGAATVL 367
Query: 383 LVFAPAEE---WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT 439
+ A+E W S D E I +K LA+++ + + ++ + K P S
Sbjct: 368 ASYTWADEALTWDSLPDRERIRYALKNLAEIYGEIVYSEFVTGTSFSWS--KNPYSC-GA 424
Query: 440 IPNCEPCRPLQ-----RSPVEGFYLAGDYTKQKYLASMEGAVLSG 479
EP + L+ SP + AG++T + M+GA+ SG
Sbjct: 425 FTAFEPGQELELFPYITSPSGKVHFAGEHTTLTH-GWMQGAIESG 468
>TIGR_CMR|BA_1924 [details] [associations]
symbol:BA_1924 "amine oxidase, flavin-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0008131 "primary
amine oxidase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001613
InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016491
KO:K00274 HSSP:P81382 HOGENOM:HOG000088141 OMA:EVQPYHL
RefSeq:NP_844333.1 RefSeq:YP_018569.1 RefSeq:YP_028049.1
ProteinModelPortal:Q81RW3 DNASU:1085964
EnsemblBacteria:EBBACT00000009767 EnsemblBacteria:EBBACT00000014669
EnsemblBacteria:EBBACT00000020792 GeneID:1085964 GeneID:2815133
GeneID:2850031 KEGG:ban:BA_1924 KEGG:bar:GBAA_1924 KEGG:bat:BAS1785
ProtClustDB:CLSK887401 BioCyc:BANT260799:GJAJ-1854-MONOMER
BioCyc:BANT261594:GJ7F-1928-MONOMER Uniprot:Q81RW3
Length = 478
Score = 93 (37.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLF 103
+ P +++I GAG++GL A L +AGHK +LEA + + G I+ F
Sbjct: 20 KTKNPKQIIIVGAGISGLVAASLLKEAGHKVTILEANNRIGGRIYTIREPF 70
Score = 76 (31.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 48/225 (21%), Positives = 94/225 (41%)
Query: 267 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR- 325
++ NS+V I++N + T++ F++T GD + P L+ + + +Y+KR
Sbjct: 258 IQENSKVM-IQVNHEQTIERFMVT------GDVAIVTIPFSALRFVEIQPYNLFSYYKRR 310
Query: 326 -LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEY--YNPNQSMLE 382
+ +L + I I F + + S+ + + Y + P + +
Sbjct: 311 AIRELNYIAATKIAIEFKSRFWEKAGQ--YGGKSITDLPIRFTYY-PSYGIHTPGAATVL 367
Query: 383 LVFAPAEE---WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT 439
+ A+E W S D E I +K LA+++ + + ++ + K P S
Sbjct: 368 ASYTWADEALTWDSLPDRERIRYALKNLAEIYGEIVYSEFVTGTSFSWS--KNPYSC-GA 424
Query: 440 IPNCEPCRPLQ-----RSPVEGFYLAGDYTKQKYLASMEGAVLSG 479
EP + L+ SP + AG++T + M+GA+ SG
Sbjct: 425 FTAFEPGQELELFPYITSPSGKVHFAGEHTTLTH-GWMQGAIESG 468
>UNIPROTKB|O69694 [details] [associations]
symbol:Rv3727 "Oxidoreductase" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0005886 "plasma membrane" evidence=IDA]
GO:GO:0005886 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0016491 EMBL:BX842584 EMBL:CP003248 PIR:H70796
RefSeq:NP_218244.1 RefSeq:NP_338385.1 RefSeq:YP_006517221.1
SMR:O69694 EnsemblBacteria:EBMYCT00000001521
EnsemblBacteria:EBMYCT00000070888 GeneID:13317344 GeneID:885766
GeneID:926430 KEGG:mtc:MT3830 KEGG:mtu:Rv3727 KEGG:mtv:RVBD_3727
PATRIC:18130187 TubercuList:Rv3727 HOGENOM:HOG000220650 OMA:CALVISD
ProtClustDB:CLSK792679 Uniprot:O69694
Length = 602
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 244 LDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFA 303
+DG ER+ P + H+ LG ++ N+RV +E DDG V + ++G D + A
Sbjct: 251 MDGPTSERMVDPWIRHLTRLGVDIHFNTRVGDLEF-DDGRVTALISSDGRRFACDYALLA 309
Query: 304 TPVDILKLQLPENWKEMAYFKRL--EKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLS 361
P L+ +L ++ Y +L + + + N F R L T+ F R +++
Sbjct: 310 VPYLTLR-ELAKSAHVKRYLPQLTQQHALALEASNGIQCFLRDLPATWPP--FIRPGVVT 366
Query: 362 VY--ADMSLTC 370
+ + SL C
Sbjct: 367 THLQSQWSLVC 377
Score = 81 (33.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88
P P+ VVIAGAG+AGL+ A LA+AG + L EA
Sbjct: 3 PSPADT-HVVIAGAGIAGLAAAMILAEAGVRVTLCEA 38
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 405 KELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGD-- 462
K ++L P +SA ++V + +P +V +P P + V LAG+
Sbjct: 458 KVASELPPHLVSAPARGQRMVNF----SPLTVL--MPGARHRSPGICTSVPNLLLAGEVI 511
Query: 463 YTKQK--YLASMEGAVLSGKLCAQAIV 487
Y+ ++ +ME A SG L A+ I+
Sbjct: 512 YSPDLTLFVPTMEKAACSGYLAARQIM 538
>RGD|2321736 [details] [associations]
symbol:LOC100360621 "rCG53598-like" species:10116 "Rattus
norvegicus" [GO:0001716 "L-amino-acid oxidase activity"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0009072
"aromatic amino acid family metabolic process" evidence=IEA]
InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757
RGD:2321736 GO:GO:0031965 GO:GO:0005764 GO:GO:0009072
GeneTree:ENSGT00530000063101 GO:GO:0001716 OrthoDB:EOG43BMP6
IPI:IPI00367483 ProteinModelPortal:D3ZN20
Ensembl:ENSRNOT00000027320 UCSC:RGD:2321736 Uniprot:D3ZN20
Length = 642
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 42/120 (35%), Positives = 63/120 (52%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN----LFGELGI 108
R SKP KVV+ GAG+AGL AK L+DAGHK +LEA + + G ++ GELG
Sbjct: 62 RTSKPQKVVVVGAGVAGLVAAKVLSDAGHKVTILEAGNRIGGRIFTFRDEKTGWIGELGA 121
Query: 109 NDRLQWKEHSMIFAMPNKPG----EFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF 164
R+ H ++ + G +F+++D E + G+ LRN + PEK+ +
Sbjct: 122 M-RMP-SSHRILHQLCRSLGLNLTQFTQYD--ENAWTEVKGVK--LRNYVVEKMPEKLGY 175
>ZFIN|ZDB-GENE-030131-9110 [details] [associations]
symbol:wu:fa99f01 "wu:fa99f01" species:7955 "Danio
rerio" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757
ZFIN:ZDB-GENE-030131-9110 GO:GO:0016491
GeneTree:ENSGT00530000063101 EMBL:BX572648 IPI:IPI00490511
ProteinModelPortal:F1QRA1 Ensembl:ENSDART00000079363 Bgee:F1QRA1
Uniprot:F1QRA1
Length = 511
Score = 114 (45.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 54 PSK-PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN----LFGELGI 108
P+K P V+I GAG AGL+ AK+L DAGHK ++EA D + G +N + ELG
Sbjct: 54 PTKTPKHVLIVGAGAAGLTAAKFLEDAGHKVTIIEASDRIGGRIQTFRNGREGWYAELGA 113
Query: 109 NDRLQWKEHSMIFAMPNK 126
R+ H ++ A+ K
Sbjct: 114 M-RIP-SFHRILLAVAQK 129
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 176 QAYVEAQDGLTV--QEWMRKQGVPDRVTTEVFIAMSKA 211
QA + QDG+TV Q+W R G +T + + S A
Sbjct: 287 QAISQTQDGVTVSYQDW-RNLGEMTNITGDYVLVTSTA 323
>UNIPROTKB|F1RHU4 [details] [associations]
symbol:IL4I1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009072 "aromatic amino acid family metabolic process"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0001716
"L-amino-acid oxidase activity" evidence=IEA] InterPro:IPR001613
InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757 GO:GO:0031965
GO:GO:0005764 GO:GO:0009072 GO:GO:0001716 OMA:MRFVEVD EMBL:CU694867
Ensembl:ENSSSCT00000003547 Uniprot:F1RHU4
Length = 577
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 40/120 (33%), Positives = 63/120 (52%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG---AYPNIQN-LFGELGI 108
R SKP +V++ GAG+AGL AK L+DAGHK +LEA + + G Y + + GELG
Sbjct: 63 RTSKPQRVIVVGAGVAGLVAAKVLSDAGHKVTVLEAANRIGGRIFTYRDRRTGWIGELGA 122
Query: 109 NDRLQWKEHSMIFAMPNKPG-EFSRF-DFPEVLPAPLNGILAILRNNEMLTWPEKVKFAI 166
R+ H ++ + G ++F + E +N + LRN + PEK+ + +
Sbjct: 123 M-RMP-SSHRILHQLCKSLGLNLTKFTQYDENTWTEVNEVK--LRNYVVEKMPEKLGYKL 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 508 508 0.00086 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 619 (66 KB)
Total size of DFA: 302 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.55u 0.10s 42.65t Elapsed: 00:00:02
Total cpu time: 42.55u 0.10s 42.65t Elapsed: 00:00:02
Start: Mon May 20 17:29:05 2013 End: Mon May 20 17:29:07 2013