BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010539
(508 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/526 (81%), Positives = 476/526 (90%), Gaps = 24/526 (4%)
Query: 3 QSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVI 62
Q+LK R + + G P +VVCVD PRP+++NT NFLEAA LS+SFR++PRP+KPLKVVI
Sbjct: 40 QALKTRTRRRSTAG--PLQVVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVI 97
Query: 63 AGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGAYPNIQ 100
AGAGLAGLSTAKYLADAGHKPLLLEARDVL GAYPN+Q
Sbjct: 98 AGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQ 157
Query: 101 NLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE 160
NLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDFP+VLPAPLNGI AILRNNEMLTWPE
Sbjct: 158 NLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPE 217
Query: 161 KVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDEL 220
K+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQGVP+RVT EVFIAMSKALNFINPDEL
Sbjct: 218 KIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDEL 277
Query: 221 SMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND 280
SMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++KIELND
Sbjct: 278 SMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELND 337
Query: 281 DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 340
DGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPVIN+HIW
Sbjct: 338 DGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIW 397
Query: 341 FDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEII 400
FDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SMLELVFAPAEEWIS +DS+II
Sbjct: 398 FDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDII 457
Query: 401 DATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLA 460
DATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLA
Sbjct: 458 DATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLA 517
Query: 461 GDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
GDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G +L+EA++
Sbjct: 518 GDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/529 (81%), Positives = 471/529 (89%), Gaps = 23/529 (4%)
Query: 1 MGQSLK-IRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLK 59
MG +L+ ++ R F P +VVCVDYPRP+++NT NF+EAAYLSS+FR SPRP KPL
Sbjct: 41 MGLTLRPAPIRAPKRNHFSPLRVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLKPLN 100
Query: 60 VVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGAYP 97
+VIAGAGLAGLSTAKYLADAGHKP+LLEARDVL GAYP
Sbjct: 101 IVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYP 160
Query: 98 NIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLT 157
+QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLP+PLNGI AILRNNEMLT
Sbjct: 161 YVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLT 220
Query: 158 WPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINP 217
WPEKVKFAIGLLPA++GGQ YVEAQDGL+VQEWM+KQGVP+RV EVFIAMSKALNFINP
Sbjct: 221 WPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALNFINP 280
Query: 218 DELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIE 277
DELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV++IQSLGGEV LNSR+QKIE
Sbjct: 281 DELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIE 340
Query: 278 LNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 337
LNDDGTVK+FLL NG V++GDAYVFATPVDILKL LP+NWK + YF+RL+KLVGVPVIN+
Sbjct: 341 LNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINV 400
Query: 338 HIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDS 397
HIWFDRKLKNTYDHLLFSRS LLSVYADMS+TCKEYY+PNQSMLELVFAPAEEWIS SD
Sbjct: 401 HIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDD 460
Query: 398 EIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGF 457
+II ATM ELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRP+QRSP+EGF
Sbjct: 461 DIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGF 520
Query: 458 YLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
YLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD LLA RG+ R+A+AS+
Sbjct: 521 YLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASV 569
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/532 (80%), Positives = 474/532 (89%), Gaps = 26/532 (4%)
Query: 1 MGQSLKIRVKTGTR----KGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSK 56
MG LKIR T K P KVVC+DYPRP++DNT N+LEAA+LSS+FR SPRP+K
Sbjct: 51 MGHKLKIRTPHATTRRLVKDLGPLKVVCIDYPRPELDNTVNYLEAAFLSSTFRASPRPTK 110
Query: 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VG 94
PL++VIAGAGL GLSTAKYLADAGHKP+LLEARDVL G
Sbjct: 111 PLEIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFG 170
Query: 95 AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNE 154
AYPNIQNLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDF E LPAPLNGILAIL+NNE
Sbjct: 171 AYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFSEALPAPLNGILAILKNNE 230
Query: 155 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 214
MLTWPEKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNF
Sbjct: 231 MLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNF 290
Query: 215 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 274
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++
Sbjct: 291 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIK 350
Query: 275 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 334
KIELN+DG+VK+F+L++G+ I+GDA+VFA PVDI KL LPE+WKE+ YF++LEKLVGVPV
Sbjct: 351 KIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPV 410
Query: 335 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 394
IN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYYNPNQSMLELVFAPAEEWIS
Sbjct: 411 INVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISR 470
Query: 395 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 454
SDSEIIDATMKELA LFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCRPLQRSP+
Sbjct: 471 SDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPI 530
Query: 455 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +L+EAS+
Sbjct: 531 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQKKLSEASV 582
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/532 (79%), Positives = 472/532 (88%), Gaps = 26/532 (4%)
Query: 1 MGQSLKIR----VKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSK 56
M LKIR + K F P KVVC+DYPRP++DNT N+LEAA+LSSSFR+SPRP+K
Sbjct: 50 MSHRLKIRNPHSITRRLAKDFRPLKVVCIDYPRPELDNTVNYLEAAFLSSSFRSSPRPTK 109
Query: 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VG 94
PL++VIAGAGL GLSTAKYLADAGHKP+LLEARDVL G
Sbjct: 110 PLEIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFG 169
Query: 95 AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNE 154
AYPN+QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAPLNGILAIL+NNE
Sbjct: 170 AYPNMQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILKNNE 229
Query: 155 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 214
MLTWPEKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNF
Sbjct: 230 MLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNF 289
Query: 215 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 274
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++
Sbjct: 290 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIK 349
Query: 275 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 334
KIELN+DG+VK F+L +G+ I+GDA+VFATPVDI KL LPE+WKE+ YF++LEKLVGVPV
Sbjct: 350 KIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPV 409
Query: 335 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 394
IN+HIWFDRKLKNT D+LLFSRS LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+S
Sbjct: 410 INVHIWFDRKLKNTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVFAPAEEWVSR 469
Query: 395 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 454
SDSEIIDATMKELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCR LQRSPV
Sbjct: 470 SDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPV 529
Query: 455 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +LAE S+
Sbjct: 530 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQRKLAETSV 581
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/500 (81%), Positives = 446/500 (89%), Gaps = 22/500 (4%)
Query: 21 KVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAG 80
+VVC D PRP+++ NFLEAA LS+SFR+SPRP K L+VV+ GAGLAGLSTAKYLADAG
Sbjct: 61 QVVCKDCPRPELEGAVNFLEAAQLSASFRSSPRPEKGLEVVVVGAGLAGLSTAKYLADAG 120
Query: 81 HKPLLLEARDVL----------------------VGAYPNIQNLFGELGINDRLQWKEHS 118
HKP+LLE+RDVL GAYPN+QNLFGELGINDRLQWKEHS
Sbjct: 121 HKPILLESRDVLGGKIAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHS 180
Query: 119 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 178
MIFAMPNKPGEFSRFDFPEVLPAPLNGI AILRNNEMLTWPEKV+FAIGLLPA++GGQAY
Sbjct: 181 MIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNNEMLTWPEKVRFAIGLLPAMVGGQAY 240
Query: 179 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 238
VEAQDGLTV EWMR+QGVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 241 VEAQDGLTVTEWMRRQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 300
Query: 239 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 298
SKMAFLDGNPPERLC+PIV+HIQSLGG +LNSR+QKIELN DGTVK+F+L NGN+I GD
Sbjct: 301 SKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQKIELNPDGTVKHFVLGNGNIITGD 360
Query: 299 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 358
AYV A PVDILKL LP+ W+E+ YF++L+KLVGVPVIN+HIWFDRKLKNTYDHLLF+RS
Sbjct: 361 AYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINVHIWFDRKLKNTYDHLLFTRSP 420
Query: 359 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 418
LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEWIS SDSEII+ TMKELAKLFPDEI+AD
Sbjct: 421 LLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISRSDSEIIERTMKELAKLFPDEIAAD 480
Query: 419 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 478
QSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYT QKYLASMEGAVLS
Sbjct: 481 QSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTNQKYLASMEGAVLS 540
Query: 479 GKLCAQAIVQDYVLLAARGK 498
GKLCAQ+IVQDY LL R K
Sbjct: 541 GKLCAQSIVQDYELLVRRSK 560
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/517 (80%), Positives = 458/517 (88%), Gaps = 23/517 (4%)
Query: 3 QSLKIRVKTGT-RKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVV 61
+SL +R K R+ +VVC D+PRP ++NT NFLEA LSS FR S +P+KPL+VV
Sbjct: 49 KSLVLRNKGKRFRRRLGALQVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVV 108
Query: 62 IAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGAYPNI 99
IAGAGLAGLSTAKYLADAGHKP+LLEARDVL GAYPNI
Sbjct: 109 IAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNI 168
Query: 100 QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWP 159
QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAPLNGI AILRNNEMLTWP
Sbjct: 169 QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWP 228
Query: 160 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDE 219
EKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQGVPDRV EVFIAMSKALNFINPDE
Sbjct: 229 EKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDE 288
Query: 220 LSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELN 279
LSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN
Sbjct: 289 LSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELN 348
Query: 280 DDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHI 339
DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HI
Sbjct: 349 PDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHI 408
Query: 340 WFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEI 399
WFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+ SD+EI
Sbjct: 409 WFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEI 468
Query: 400 IDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYL 459
I+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYL
Sbjct: 469 IEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYL 528
Query: 460 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 496
AGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R
Sbjct: 529 AGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/517 (80%), Positives = 458/517 (88%), Gaps = 23/517 (4%)
Query: 3 QSLKIRVKTGT-RKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVV 61
+SL +R K R+ +VVC D+PRP ++NT NFLEA LSS FR S +P+KPL+VV
Sbjct: 49 KSLVLRNKGKRFRRRLGALQVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVV 108
Query: 62 IAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGAYPNI 99
IAGAGLAGLSTAKYLADAGHKP+LLEARDVL GAYPNI
Sbjct: 109 IAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNI 168
Query: 100 QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWP 159
QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAPLNGI AILRNNEMLTWP
Sbjct: 169 QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWP 228
Query: 160 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDE 219
EKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQGVPDRV EVFIAMSKALNFINPDE
Sbjct: 229 EKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDE 288
Query: 220 LSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELN 279
LSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN
Sbjct: 289 LSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELN 348
Query: 280 DDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHI 339
DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HI
Sbjct: 349 PDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHI 408
Query: 340 WFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEI 399
WFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+ SD+EI
Sbjct: 409 WFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEI 468
Query: 400 IDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYL 459
I+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYL
Sbjct: 469 IEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYL 528
Query: 460 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 496
AGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R
Sbjct: 529 AGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/503 (80%), Positives = 443/503 (88%), Gaps = 22/503 (4%)
Query: 21 KVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAG 80
+VVC D+PRP +++T N+LEA LSS FR S RPSKPL+VV+AGAGLAGLSTAKYLADAG
Sbjct: 60 QVVCKDFPRPPLESTINYLEAGQLSSFFRNSERPSKPLQVVVAGAGLAGLSTAKYLADAG 119
Query: 81 HKPLLLEARDVL----------------------VGAYPNIQNLFGELGINDRLQWKEHS 118
HKP+LLEARDVL GAYPNIQNLFGEL I DRLQWKEHS
Sbjct: 120 HKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELRIEDRLQWKEHS 179
Query: 119 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 178
MIFAMPNKPGEFSRFDFPE LPAP+NGI AILRNNEMLTWPEKVKFAIGLLPA++GGQ Y
Sbjct: 180 MIFAMPNKPGEFSRFDFPETLPAPINGIWAILRNNEMLTWPEKVKFAIGLLPAMVGGQPY 239
Query: 179 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 238
VEAQDGLTV EWM+KQGVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 240 VEAQDGLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 299
Query: 239 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 298
SKMAFLDGNPPERLC+PIV+HI+S GGEVRLNSR++KIELN DGTVK+F L++G I GD
Sbjct: 300 SKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIKKIELNPDGTVKHFALSDGTQITGD 359
Query: 299 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 358
AYV ATPVDI KL +P+ W E+ YFK+LEKLVGVPVIN+HIWFDRKL NTYDHLLFSRSS
Sbjct: 360 AYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINVHIWFDRKLNNTYDHLLFSRSS 419
Query: 359 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 418
LLSVYADMS+TCKEYY+PN+SMLELVFAPA+EWI SD+EIIDATM+ELAKLFPDEI+AD
Sbjct: 420 LLSVYADMSVTCKEYYDPNRSMLELVFAPADEWIGRSDTEIIDATMEELAKLFPDEIAAD 479
Query: 419 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 478
QSKAKI+KYH+VKTPRSVYKT+PNCEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 480 QSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 539
Query: 479 GKLCAQAIVQDYVLLAARGKGRL 501
GKLCAQ+IVQDY LA R + L
Sbjct: 540 GKLCAQSIVQDYSRLALRSQKSL 562
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 277/460 (60%), Positives = 338/460 (73%), Gaps = 30/460 (6%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGA 95
++VVIAGAGLAGL+ AKYLADAG P++LE RDVL GA
Sbjct: 1 MRVVIAGAGLAGLACAKYLADAGFTPVVLERRDVLGGKIAAWKDEDGDWYETGLHIFFGA 60
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
YPN+ LF EL I DRLQWKEHSMIF P KPG +SRFDFP++ PAP+NG++AILRNN+M
Sbjct: 61 YPNMLQLFKELDIEDRLQWKEHSMIFNQPEKPGTYSRFDFPDI-PAPINGLVAILRNNDM 119
Query: 156 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI 215
LTWPEK++F +GLLPAI+ GQ+YVE D T EWM KQ +P R+ EVFIAMSKALNFI
Sbjct: 120 LTWPEKIRFGLGLLPAIVQGQSYVEEMDKYTWSEWMAKQNIPPRIEKEVFIAMSKALNFI 179
Query: 216 NPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQK 275
+PDE+S +L ALNRFLQEK+GSKMAFLDG PPERLC P+V++I GGEV +N +++
Sbjct: 180 DPDEISATILLTALNRFLQEKNGSKMAFLDGAPPERLCQPLVDYITERGGEVHINKPLKE 239
Query: 276 IELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLV 330
I LN+DG+VK +L+ VI D YV A PVD LK +P W+E FK+++ L
Sbjct: 240 ILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVPAPWREYPEFKQIQGLE 299
Query: 331 GVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEE 390
GVPVIN+H+WFDRKL + DHLLFSRS LLSVYADMS TC+EY +P++SMLELV APA++
Sbjct: 300 GVPVINLHLWFDRKLTDI-DHLLFSRSPLLSVYADMSNTCREYSDPDKSMLELVLAPAQD 358
Query: 391 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 450
WI SD EI+ ATM E+ +LFP + D + A+++K HVVKTPRSVYK P + CRP Q
Sbjct: 359 WIGKSDEEIVAATMAEIKQLFPQHFNGD-NPARLLKSHVVKTPRSVYKATPGRQACRPDQ 417
Query: 451 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 490
R+ V FYLAGD+T QKYL SMEGAVLSGK CAQAI D+
Sbjct: 418 RTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAIAADF 457
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/477 (58%), Positives = 341/477 (71%), Gaps = 30/477 (6%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGA 95
++V IAGAGLAGLS AKYLADAGH P++ E RDVL GA
Sbjct: 1 MRVAIAGAGLAGLSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGA 60
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
YPN+ LF EL I DRLQWK HSMIF P KPG +SRFDFP++ PAP+NG+ AIL NN+M
Sbjct: 61 YPNMLQLFKELNIEDRLQWKSHSMIFNQPTKPGTYSRFDFPDI-PAPINGVAAILSNNDM 119
Query: 156 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI 215
LTW EK+KF +GLLPA+I GQ+YVE D + EW+RKQ +P+RV EVFIAM+KALNFI
Sbjct: 120 LTWEEKIKFGLGLLPAMIRGQSYVEEMDQYSWTEWLRKQNIPERVNDEVFIAMAKALNFI 179
Query: 216 NPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQK 275
+PDE+S +L ALNRFLQEK GS MAFLDG PPERLC PIVEH+Q+ GG+V LN+ +++
Sbjct: 180 DPDEISATVVLTALNRFLQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKE 239
Query: 276 IELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLV 330
LNDD +V+ F + +I+ DAYV A PVD LKL LP+ WK M YF++L+ L
Sbjct: 240 FVLNDDSSVQAFRIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGLQ 299
Query: 331 GVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEE 390
GVPVINIH+WFDRKL + DHLLFSRS LLSVYADMS TC+EY +P++SMLELVFAPA++
Sbjct: 300 GVPVINIHLWFDRKLTDI-DHLLFSRSPLLSVYADMSNTCREYEDPDRSMLELVFAPAKD 358
Query: 391 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 450
WI SD +I+ ATM E+ KLFP S ++ A++ KY +VKTP SVYK P + RP Q
Sbjct: 359 WIGRSDEDILAATMAEIEKLFPQHFSG-ENPARLRKYKIVKTPLSVYKATPGRQQYRPDQ 417
Query: 451 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMC 507
SP+ F+L GDYT Q+YLASMEGAVLSGKL AQAI+ L R GR AS
Sbjct: 418 ASPIANFFLTGDYTMQRYLASMEGAVLSGKLTAQAIIARQDELQRRSSGRPLAASQA 474
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/489 (30%), Positives = 245/489 (50%), Gaps = 61/489 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD----------------------VLVGA 95
++V I GAGLAG++TA L DAGH+ L EAR V G
Sbjct: 1 MRVAIVGAGLAGMATAVELVDAGHEVELYEARSFIGGKVGSWVDGDGNHIEMGLHVFFGC 60
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y N+ NL ++G L+ KEH+ F N+ G DF + AP NG+ A +++
Sbjct: 61 YYNLFNLMEKVGAKQNLRLKEHTHTFV--NQGGRIGELDFRFLTGAPFNGLKAFFTTSQL 118
Query: 156 LTWPEKVKFAIGLLPAII--------GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIA 207
T +K+ +I L + I G + D ++ EW +G + +++
Sbjct: 119 DT-KDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKMWDP 177
Query: 208 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 267
++ AL FI+ + +S +C+L F S + L+G+P E L PI E+++ G +
Sbjct: 178 IAYALGFIDTENISARCMLTIFQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRGTKF 237
Query: 268 RLNSRVQKIE--LNDDGTVKNFLLTNGNV----IDGDAYVFATPVDILKLQLPENWK-EM 320
+V++I+ + D T L+ N V + DAYV A V +K LPENW+ +
Sbjct: 238 YTRHKVKEIKTKVTDGETRVTGLIINDGVETKTVTADAYVAACDVPGIKNLLPENWRTQW 297
Query: 321 AYFKRLEKLVGVPVINIHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADM 366
+F ++ L VPV + + FD ++L+ + D+LL++ + S +AD+
Sbjct: 298 DFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADL 357
Query: 367 SLTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI 424
+LT +YY P + S+L+LV P + ++ S+ I +K++ LFP +AD + +
Sbjct: 358 ALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPS--AADLN---M 412
Query: 425 VKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 484
Y V+K +S+Y+ P + RP Q +P+ F+LAG YT+Q Y+ SMEGA LSG+ AQ
Sbjct: 413 TWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQ 472
Query: 485 AIVQDYVLL 493
AI+ + L
Sbjct: 473 AILANQARL 481
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 234/481 (48%), Gaps = 59/481 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----------------------DVLVGA 95
LKV I GAGLAG+STA L D GH+ L E+R V G
Sbjct: 65 LKVAIIGAGLAGMSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGC 124
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y N+ L ++G ++ L KEH+ F NK G DF + APL+GI A LR N++
Sbjct: 125 YSNLFRLMKKVGADNNLLVKEHTHTFV--NKGGTIGELDFRFPVGAPLHGIQAFLRTNQL 182
Query: 156 LTWPE-KVKFAIGLLPAII------GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAM 208
+ + + A+ L P + G V D ++ +W +G T ++ +
Sbjct: 183 KVYDKARNAVALALSPVVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRMWDPV 242
Query: 209 SKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 268
AL FI+ D +S +C+L F + S + L G+P L PI ++I GG
Sbjct: 243 RYALGFIDCDNISARCMLTIFTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFH 302
Query: 269 LNSRVQKI--ELNDDGT--VKNFLLTNGN---VIDGDAYVFATPVDILKLQLPENWKEMA 321
L +++ E + DG VK LLT +I DAYV A V +K LP W+E
Sbjct: 303 LRWGCREVLYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLPSEWREWE 362
Query: 322 YFKRLEKLVGVPVINIHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMS 367
F + KL GVPV+ + + ++ R+L+ D+LL++ + S ++D++
Sbjct: 363 MFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLA 422
Query: 368 LTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425
L+ +YY Q S+++ V P + ++ + EII K++ +LFP ++
Sbjct: 423 LSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSS-----RGLEVT 477
Query: 426 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 485
VVK +S+Y+ P +P RP Q++PV+ F+L+G YTKQ Y+ SMEGA LSG+ +
Sbjct: 478 WSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAY 537
Query: 486 I 486
I
Sbjct: 538 I 538
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 241/499 (48%), Gaps = 60/499 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----------------------DVLVGA 95
LKV I GAGLAG+STA L D GH+ + E+R V G
Sbjct: 80 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGC 139
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y N+ L ++G L KEH+ F NK GE DF + APL+GI A L N++
Sbjct: 140 YNNLFRLLKKVGAEKNLLVKEHTHTFV--NKGGEIGELDFRFPVGAPLHGINAFLSTNQL 197
Query: 156 LTWPE-KVKFAIGLLPAII------GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAM 208
+ + + A+ L P + G + D ++ EW +G ++ +
Sbjct: 198 KIYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEWFLSKGGTRASIQRMWDPV 257
Query: 209 SKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 268
+ AL FI+ D +S +C+L F + S + L G+P L PI ++I GG
Sbjct: 258 AYALGFIDCDNMSARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIMDKGGRFH 317
Query: 269 LNSRVQKI--ELNDDGTVKNFLL-----TNGNVIDGDAYVFATPVDILKLQLPENWKEMA 321
L +++ E + DG++ L T ++ DAYV A V +K +P+ W+E+
Sbjct: 318 LRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACDVPGIKRLVPQKWRELE 377
Query: 322 YFKRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMS 367
+F + KLVGVPV+ + + ++ R+LK D+LL++ + S +AD++
Sbjct: 378 FFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLDNLLYTPDADFSCFADLA 437
Query: 368 LTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425
L +YY Q S+L+ V P + ++ S+ EII K++ LFP ++
Sbjct: 438 LASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSS-----QGLEVT 492
Query: 426 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 485
V+K +S+Y+ P +P RP Q++PVE F+LAG YTKQ Y+ SMEGA LSG+ +
Sbjct: 493 WSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAY 552
Query: 486 IVQ-DYVLLAARGKGRLAE 503
I L+A R K AE
Sbjct: 553 ICNVGEQLMALRKKITAAE 571
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 232/490 (47%), Gaps = 59/490 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----------------------DVLVGA 95
LKV I GAGLAG+STA L D GH+ + E+R V G
Sbjct: 83 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGC 142
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y N+ L ++G L K+H+ F N+ GE DF + APL+GI A L N++
Sbjct: 143 YNNLFRLLKKVGAEKNLLVKDHTHTFV--NRGGELGELDFRFPVGAPLHGINAFLTTNQL 200
Query: 156 LTWPE-KVKFAIGLLPAII------GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAM 208
T+ + + A+ L P + G + D ++ EW +G ++ +
Sbjct: 201 KTYDKARNAVALALSPVVRALVDPDGAMTQIRNLDNISFSEWFMSKGGTRTSIQRMWDPV 260
Query: 209 SKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 268
+ AL FI+ D +S +C+L + F + S + L G+P L PI ++I GG
Sbjct: 261 AYALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRDYIIEKGGRFH 320
Query: 269 LNSRVQKIELNDDGTVKNFLL-------TNGNVIDGDAYVFATPVDILKLQLPENWKEMA 321
L ++I + ++ T ++ D Y+ A V +K LP NW+E
Sbjct: 321 LRWGCREILYEKSANGETYVTGLAMSKATQKQIVKADVYIAACDVPGIKRLLPSNWREWE 380
Query: 322 YFKRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMS 367
+F + KLVGVPV+ + + ++ R+L+ D+LL++ + S +AD++
Sbjct: 381 FFDNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLA 440
Query: 368 LTCKE-YYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425
L E YY Q S+L+ V P + ++ + EII K++ LFP ++
Sbjct: 441 LASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSS-----QGLEVT 495
Query: 426 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 485
VVK +S+Y+ P +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+ +
Sbjct: 496 WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAF 555
Query: 486 IVQDYVLLAA 495
I LAA
Sbjct: 556 ICDAGEELAA 565
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 238/499 (47%), Gaps = 60/499 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----------------------DVLVGA 95
LKV I GAGLAG+STA L D GH+ + E+R V G
Sbjct: 80 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGC 139
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y N+ L ++G L KEH+ F NK GE DF + APL+GI A L N++
Sbjct: 140 YNNLFRLMKKVGAEKNLLVKEHTHTFV--NKGGEIGELDFRFPVGAPLHGINAFLSTNQL 197
Query: 156 LTWPE-KVKFAIGLLPAII------GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAM 208
T+ + + A+ L P + G + D ++ +W +G ++ +
Sbjct: 198 KTYDKARNAVALALSPVVRALVDPDGALQQIRDLDSVSFSDWFMSKGGTRASIQRMWDPV 257
Query: 209 SKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 268
+ AL FI+ D +S +C+L F + S + L G+P L PI ++I GG
Sbjct: 258 AYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIIDKGGRFH 317
Query: 269 LNSRVQKI--ELNDDGTVKNFLL-----TNGNVIDGDAYVFATPVDILKLQLPENWKEMA 321
L +++ E + DG++ L T ++ DAYV A V +K +P+ W+E+
Sbjct: 318 LRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACVVPGIKRLVPQKWRELE 377
Query: 322 YFKRLEKLVGVPVINIHIWFD--------------RKLKNTYDHLLFSRSSLLSVYADMS 367
+F + KL+GVPV+ + + ++ K D+LL++ + S +AD++
Sbjct: 378 FFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGLDNLLYTPDADFSCFADLA 437
Query: 368 LTCKE-YYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425
L E YY Q S+L+ V P + ++ + EII K++ LFP ++
Sbjct: 438 LASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSS-----QGLEVT 492
Query: 426 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 485
VVK +S+Y+ P +P RP Q++PVE F+LAG YTKQ Y+ SMEGA LSG+ +
Sbjct: 493 WSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAY 552
Query: 486 IVQ-DYVLLAARGKGRLAE 503
I LLA R K AE
Sbjct: 553 ICDAGEQLLALRKKIAAAE 571
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 240/491 (48%), Gaps = 61/491 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD----------------------VLVGA 95
LKV I GAGLAG+STA L D GH+ + E+R V G
Sbjct: 65 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGC 124
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y N+ L ++G ++ L K+H+ F N+ GE DF + APL+GI A L N++
Sbjct: 125 YNNLFRLMKKVGADENLLVKDHTHTFV--NRGGEIGELDFRLPMGAPLHGIRAFLTTNQL 182
Query: 156 LTWPEKVKFAIGL-----LPAII---GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIA 207
+ +K + A+ L + A+I G + D ++ +W +G ++
Sbjct: 183 KPY-DKARNAVALALSPVVRALIDPNGAMQDIRNLDNISFSDWFLSKGGTRMSIQRMWDP 241
Query: 208 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 267
++ AL FI+ D +S +C+L + F + S + L G+P L PI ++I GG
Sbjct: 242 VAYALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRF 301
Query: 268 RLNSRVQKI---EL-NDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEM 320
L ++I EL N D + + TN ++ D YV A V +K +P W+E
Sbjct: 302 HLRWGCREILYDELSNGDTYITGIAMSKATNKKLVKADVYVAACDVPGIKRLIPSEWREW 361
Query: 321 AYFKRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADM 366
F + KLVGVPV+ + + ++ R+L+ D+LL++ + S ++D+
Sbjct: 362 DLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDL 421
Query: 367 SLTCKE-YYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI 424
+L+ E YY Q S+++ V P + ++ + II+ K++ LFP ++
Sbjct: 422 ALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPS-----SQGLEV 476
Query: 425 VKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 484
+ VVK +S+Y+ P +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+ A
Sbjct: 477 LWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAA 536
Query: 485 AIVQDYVLLAA 495
I LAA
Sbjct: 537 YICSAGEDLAA 547
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 237/484 (48%), Gaps = 60/484 (12%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----------------------DVLVGA 95
++V I GAGLAGL+TA LADAG + + E+R V G
Sbjct: 1 MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGC 60
Query: 96 YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM 155
Y + L ++G L+ KEH+ F NK G DF AP NG+ A ++
Sbjct: 61 YYQLFELMNKVGAFSHLRLKEHTHTFV--NKGGRTGALDFRFFTGAPFNGLKAFFTTSQ- 117
Query: 156 LTWPEKVKFAIGLLPAII--------GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIA 207
L+ +K++ AI L + I G + D ++ +W R G + ++
Sbjct: 118 LSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMWNP 177
Query: 208 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 267
++ AL FI+ + +S +C+L F S + L+G+P E L PI+ ++++ G +V
Sbjct: 178 IAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKV 237
Query: 268 RLNSRVQKI---ELNDDGTVKNFLLTNGNVID---GDAYVFATPVDILKLQLPENWKEMA 321
+V++I E V ++ G+ ++ DAYV A + ++ LP+ W++ +
Sbjct: 238 YTRRQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWS 297
Query: 322 YFKRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMS 367
F + KL VPV + + FD ++LK D+LL++ + S +AD++
Sbjct: 298 EFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLA 357
Query: 368 LTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425
LT +YY Q S+L+LV P + +I S+ I +K++ +LFP + +
Sbjct: 358 LTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSS-----RELNMT 412
Query: 426 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 485
Y VVK +S+Y+ P + RP Q++P+ F+LAG YT+Q Y+ SMEGA +SG+ A+
Sbjct: 413 WYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKV 472
Query: 486 IVQD 489
I+ +
Sbjct: 473 ILDN 476
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 229/448 (51%), Gaps = 41/448 (9%)
Query: 77 ADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFP 136
AD H + L V Y N+ L ++G + L K H+ F NK GE DF
Sbjct: 45 ADGNHIEMGLH---VFFFNYANLFALMRKVGAFENLLPKAHTHTFI--NKGGEVGELDFR 99
Query: 137 EVLPAPLNGILAILRNNEMLTWPEKVK--FAIGLLPAIIGGQAY------VEAQDGLTVQ 188
+ AP NG+ A ++ LTW +K++ A+G P + G Y + A D ++
Sbjct: 100 FPIGAPFNGLKAFFTTSQ-LTWLDKLQNALALGTSPLVRGILDYEGAMKIIRALDRISFA 158
Query: 189 EWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 248
+W R G + ++ ++ AL FI+ + +S +C+L F + SK+ L G+P
Sbjct: 159 DWFRSHGGSEGSLKRMWNPIAYALGFIDTENISARCMLTVFQMFAAKTEASKLNLLAGSP 218
Query: 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIEL---NDDGTVKNFLLTNGNVID---GDAYVF 302
E L PI+++IQ+ G + L RV++IE N V + +G+ ++ D Y+
Sbjct: 219 AEYLHKPILDYIQARGATLHLRRRVREIEYTETNGQTVVTGLQIADGDAVERVEADVYLA 278
Query: 303 ATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD--------RKLKNTYDH--- 351
A V ++ LPE W++ + F + KL VPV + + FD R+ ++ DH
Sbjct: 279 ACDVPGIQRLLPEAWRKWSEFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATG 338
Query: 352 ---LLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKE 406
LL++ + S + D++L+ K+YY Q S+L+ V P + +I+ + +I +K+
Sbjct: 339 LDNLLYTADADFSCFTDLALSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQ 398
Query: 407 LAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQ 466
+ +LFP + + + +VVK +S+Y+ P +P RP Q++P+ F+LAG YT+Q
Sbjct: 399 VHELFPSSRDLNMTWS-----NVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSYTQQ 453
Query: 467 KYLASMEGAVLSGKLCAQAIVQDYVLLA 494
Y+ SMEGA +SG+ A+A+++ + A
Sbjct: 454 DYIDSMEGATISGRRAAKAMLEAQAIAA 481
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 241/515 (46%), Gaps = 61/515 (11%)
Query: 48 FRTSPRPSK--PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR---------------- 89
F P P K LKV I GAGLAG+STA L D GH+ + ++R
Sbjct: 45 FPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGN 104
Query: 90 ------DVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPL 143
V G Y N+ L ++G L K+H+ F NK G DF + AP+
Sbjct: 105 HIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKDHTHTFI--NKDGTIGELDFRFPVGAPI 162
Query: 144 NGILAILRNNEMLTWPE-KVKFAIGLLPAII------GGQAYVEAQDGLTVQEWMRKQGV 196
+GI A L N++ + + + A+ L P + G + D ++ +W +G
Sbjct: 163 HGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGG 222
Query: 197 PDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPI 256
++ ++ AL FI+ D +S +C+L + F + S + L G+P L PI
Sbjct: 223 TRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPI 282
Query: 257 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-------TNGNVIDGDAYVFATPVDIL 309
++I GG + L ++I + + ++ TN ++ D YV A V +
Sbjct: 283 KQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGI 342
Query: 310 KLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFS 355
K LP+ W+E +F + +L GVPV+ + + ++ R+LK D+LL++
Sbjct: 343 KRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYT 402
Query: 356 RSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPD 413
+ S +AD++L +YY Q ++L+ V P + ++ + +II+ ++ +LFP
Sbjct: 403 PDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPS 462
Query: 414 EISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASME 473
++ VVK +S+Y+ P +P RP Q++P++ F+LAG YTKQ Y+ SME
Sbjct: 463 -----SRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSME 517
Query: 474 GAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 508
GA LSG+ + I LA K + A+ P
Sbjct: 518 GATLSGRQASSYICDAGEELAELNKKLSSSATAVP 552
>sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2
SV=1
Length = 490
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 264 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL-------QLPEN 316
G ++R+ RV KI +G NG DA V A P+ +LK +LPE
Sbjct: 237 GLDIRVGHRVTKIVRRYNGV--KVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPE- 293
Query: 317 WKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNP 376
WK+ A + ++ + + K+ ++ + + + L V A+ S C + N
Sbjct: 294 WKQEA------------INDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNL 341
Query: 377 NQSMLE--LVFAPAEEWIS----CSDSEIIDATMKELAKLFPDEI----------SADQS 420
+++ LV+ PA + SD + + +L ++ PD + +D +
Sbjct: 342 HKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVN 401
Query: 421 KAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 480
Y +V P +Y+ + R PV+ + AG+ T + S+ GA +G
Sbjct: 402 SMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGSVHGAYSTGL 451
Query: 481 LCAQ 484
+ A+
Sbjct: 452 MAAE 455
>sp|Q8H191|PAO4_ARATH Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1
SV=1
Length = 497
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 33/235 (14%)
Query: 266 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 325
++RLN RV K+ + V + N + DA + P+ +LK L + E+ +K
Sbjct: 240 DIRLNHRVTKVVRTSNNKVIVAVEGGTNFV-ADAVIITVPIGVLKANLIQFEPELPQWKT 298
Query: 326 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE--L 383
+ G+ V N + K+ +D + L + A S C + N +++ L
Sbjct: 299 -SAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352
Query: 384 VFAPA----EEWISCSDSEIIDATMKELAKLFPD----------EISADQSKAKIVKYHV 429
V+ A ++ SD + M +L K+FPD D + Y V
Sbjct: 353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDV 412
Query: 430 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 484
V P +Y P PV+ + G+ ++ S GA L+G +Q
Sbjct: 413 VGMPEDLY----------PRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQ 457
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 60 VVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
V++ G+G++GL+ A+ L++A K +LE+RD + G
Sbjct: 31 VIVIGSGISGLAAARNLSEASFKVTVLESRDRIGG 65
>sp|Q4JHE1|OXLA_PSEAU L-amino-acid oxidase OS=Pseudechis australis PE=1 SV=1
Length = 517
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
R S P +VV+ GAG+AGLS A LA AGH+ LLEA + + G +N
Sbjct: 48 RTSNPKRVVVVGAGMAGLSAAYVLAGAGHQVTLLEASERVGGRVNTYRN 96
>sp|Q4JHE3|OXLA_OXYSC L-amino-acid oxidase OS=Oxyuranus scutellatus scutellatus PE=2 SV=1
Length = 517
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 24 CVDYPRPDIDNTSNFLEAAY---LSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAG 80
C D R ++ F EA Y L + + S P VV+ GAG+AGLS A LA AG
Sbjct: 18 CADVRRNPLEEC--FREADYEEFLEIARNGLKKTSNPKHVVVVGAGMAGLSAAYVLAGAG 75
Query: 81 HKPLLLEARDVLVGAYPNIQN 101
HK LLEA + + G +N
Sbjct: 76 HKVTLLEASERVGGRVHTYRN 96
>sp|A8QL52|OXLA_BUNFA L-amino-acid oxidase OS=Bungarus fasciatus PE=1 SV=1
Length = 517
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 24 CVDYPRPDIDNTSNFLEAAY---LSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAG 80
C D R ++ F EA Y L + + S P VV+ GAG+AGLS A LA AG
Sbjct: 18 CADDRRSALEEC--FREADYEEFLEIARNGLKKTSNPKHVVVVGAGMAGLSAAYVLAGAG 75
Query: 81 HKPLLLEARDVLVG 94
H+ LLEA D + G
Sbjct: 76 HRVTLLEASDRVGG 89
>sp|P19410|BAICD_EUBSP Bile acid-inducible operon protein CD OS=Eubacterium sp. (strain
VPI 12708) GN=baiCD PE=3 SV=2
Length = 639
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 44 LSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96
L ++ P+ P KV+I G G+AG+ A+ L GH P++ EA D L G +
Sbjct: 359 LCLEYQGMPKTDAPKKVMIVGGGMAGMIAAEVLKTRGHNPVIFEASDKLAGQF 411
>sp|Q96RQ9|OXLA_HUMAN L-amino-acid oxidase OS=Homo sapiens GN=IL4I1 PE=1 SV=1
Length = 567
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN----LFGELG 107
R KP +V++ GAG+AGL AK L+DAGHK +LEA + + G ++ GELG
Sbjct: 55 RTLKPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTYRDQNTGWIGELG 113
>sp|A6MFL0|OXLA_DEMVE L-amino-acid oxidase OS=Demansia vestigiata PE=2 SV=1
Length = 517
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
+ S P +VV+ GAG+AGLS A LA AGH +LLEA + + G +N
Sbjct: 48 QTSNPKRVVVVGAGMAGLSAAYVLAGAGHNVMLLEASERVGGRVNTYRN 96
>sp|A8QL58|OXLA_NAJAT L-amino-acid oxidase (Fragment) OS=Naja atra PE=1 SV=1
Length = 449
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
+ S P VV+ GAG+AGLS A LA AGHK LLEA + + G N
Sbjct: 48 KTSNPKHVVVVGAGMAGLSAAYVLAGAGHKVTLLEASERVGGRVITYHN 96
>sp|A8QL51|OXLA_BUNMU L-amino-acid oxidase OS=Bungarus multicinctus PE=2 SV=1
Length = 517
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
+ S P VV+ GAG+AGLS A L AGH+ LLEA D + G
Sbjct: 48 KTSNPKHVVVVGAGMAGLSAAYVLEKAGHRVTLLEASDRVGG 89
>sp|P81383|OXLA_OPHHA L-amino-acid oxidase OS=Ophiophagus hannah PE=1 SV=3
Length = 491
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 43 YLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
+L+++ + P K+VI GAG++GL+ AK +AGH+ ++LEA D + G
Sbjct: 37 WLATASHGLTKTLNPKKIVIVGAGISGLTAAKLFREAGHEVVILEASDRVGG 88
>sp|O93364|OXLA_CROAD L-amino-acid oxidase OS=Crotalus adamanteus PE=1 SV=1
Length = 516
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
S P +VVI GAG+AGLS A LA AGH+ +LEA + + G
Sbjct: 49 SNPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGG 88
>sp|P56742|OXLA_CROAT L-amino-acid oxidase OS=Crotalus atrox PE=1 SV=2
Length = 516
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
S P +VVI GAG+AGLS A LA AGH+ +LEA + + G
Sbjct: 49 SNPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGG 88
>sp|F8S0Z5|OXLA2_CROAD L-amino-acid oxidase OS=Crotalus adamanteus PE=2 SV=1
Length = 516
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
S P +VVI GAG+AGLS A LA AGH+ +LEA + + G
Sbjct: 49 SNPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGG 88
>sp|Q6TGQ9|OXLA_BOTJR L-amino-acid oxidase (Fragment) OS=Bothrops jararacussu PE=1 SV=1
Length = 497
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
S P +VVI GAG++GLS A LA+AGH+ +LEA + G +N
Sbjct: 44 SNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGQVKTYRN 90
>sp|Q6TGQ8|OXLA_BOTMO L-amino-acid oxidase (Fragment) OS=Bothrops moojeni PE=1 SV=1
Length = 478
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
S P +VVI GAG++GLS A LA+AGH+ +LEA + G +N
Sbjct: 37 SNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGRVKTYRN 83
>sp|Q4JHE2|OXLA_NOTSC L-amino-acid oxidase OS=Notechis scutatus scutatus PE=2 SV=1
Length = 517
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
S P VV+ GAG+AGLS A LA AGH LLEA + + G +N
Sbjct: 50 SNPKHVVVVGAGMAGLSAAYVLAGAGHNVTLLEASERVGGRVNTYRN 96
>sp|B0VXW0|OXLA_SISCA L-amino-acid oxidase OS=Sistrurus catenatus edwardsii PE=2 SV=1
Length = 516
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
S P +VVI GAG++GLS A LA AGH+ +LEA + + G
Sbjct: 49 SNPKRVVIVGAGMSGLSAAYVLAGAGHQVTVLEASERVGG 88
>sp|G8XQX1|OXLA_DABRR L-amino-acid oxidase OS=Daboia russelii PE=1 SV=1
Length = 504
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA-----------RDVLVGAYPNI 99
+ S P +VI GAG++GLS A LA AGHK +LEA R+V G Y N+
Sbjct: 47 KTSNPKHIVIVGAGMSGLSAAYVLAGAGHKVTVLEASERPGGRVRTHRNVKEGWYANL 104
>sp|B5U6Y8|OXLA_ECHOC L-amino-acid oxidase OS=Echis ocellatus PE=1 SV=1
Length = 504
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
+ S P +V+ GAG++GLS A LA AGHK +LEA ++ G
Sbjct: 47 KTSNPKDIVVVGAGMSGLSAAYVLAGAGHKVTVLEASQLVGG 88
>sp|P0DI84|OXLA_VIPAA L-amino-acid oxidase OS=Vipera ammodytes ammodytes PE=1 SV=1
Length = 484
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94
+ S P VV+ GAG++GLS A LA AGHK +LEA + G
Sbjct: 27 KTSNPKHVVVVGAGMSGLSAAYVLAGAGHKVTVLEASERAGG 68
>sp|Q6NSN2|AOF_DANRE Amine oxidase [flavin-containing] OS=Danio rerio GN=mao PE=1 SV=1
Length = 522
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 60 VVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
V++ G G++GLS AK L D+G P++LEAR + G +QN
Sbjct: 8 VIVIGGGISGLSAAKLLVDSGLNPVVLEARSRVGGRTYTVQN 49
>sp|Q21988|AMX1_CAEEL Amine oxidase family member 1 OS=Caenorhabditis elegans GN=amx-1
PE=3 SV=3
Length = 824
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 43 YLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNL 102
Y + FR P K+ I GAG++G+STA++L G +L EA+D G + Q+L
Sbjct: 337 YGAFDFRIDPLNGMRPKIAIIGAGISGISTARHLKHLGIDAVLFEAKDRFGGRMMDDQSL 396
Query: 103 FGELG 107
+G
Sbjct: 397 GVSVG 401
>sp|P86810|OXLA_SIGCA L-amino-acid oxidase OS=Siganus canaliculatus PE=1 SV=2
Length = 527
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
P + VVI GAG+AGL+ AK L DAGH+ ++EA + G +N
Sbjct: 55 PHINTSNHVVIVGAGVAGLTAAKLLQDAGHRVTIVEANSRIGGRVETYRN 104
>sp|P49253|AOF_ONCMY Amine oxidase [flavin-containing] OS=Oncorhynchus mykiss GN=mao
PE=2 SV=2
Length = 522
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 60 VVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
V++ G G++GLS AK L + G P++LEARD + G +QN
Sbjct: 9 VIVIGGGISGLSAAKLLKEKGLSPVVLEARDRVGGRTFTVQN 50
>sp|P81382|OXLA_CALRH L-amino-acid oxidase OS=Calloselasma rhodostoma PE=1 SV=2
Length = 516
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90
S P VVI GAG+AGLS A LA AGH+ +LEA +
Sbjct: 49 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 84
>sp|B5AR80|OXLA_BOTPA L-amino-acid oxidase (Fragment) OS=Bothropoides pauloensis PE=1
SV=1
Length = 503
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88
S P VVI GAG++GLS A LA+AGH+ +LEA
Sbjct: 49 SNPKHVVIVGAGMSGLSAAYVLANAGHQVTVLEA 82
>sp|Q6WP39|OXLA_TRIST L-amino-acid oxidase OS=Trimeresurus stejnegeri PE=1 SV=1
Length = 516
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
S P VVI GAG++GLS A LA AGH+ +LEA + G +N
Sbjct: 49 SNPKHVVIVGAGMSGLSAAYVLAGAGHEVTVLEASERAGGRVRTYRN 95
>sp|Q90W54|OXLA_GLOBL L-amino-acid oxidase OS=Gloydius blomhoffii PE=1 SV=1
Length = 504
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
S P VVI GAG++GLS A L+ AGH+ +LEA + G +N
Sbjct: 49 SNPKHVVIVGAGMSGLSAAYVLSGAGHQVTVLEASERAGGRVRTYRN 95
>sp|B4RBL4|DADA_PHEZH D-amino acid dehydrogenase small subunit OS=Phenylobacterium
zucineum (strain HLK1) GN=dadA PE=3 SV=1
Length = 426
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 22/106 (20%)
Query: 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD--VLVGAYPNIQNLFGELGINDRLQWK 115
+KVV+ GAG+ G++TA YLA AGH+ ++LE +D L ++ N GE+ W
Sbjct: 1 MKVVVLGAGVIGVTTAWYLAKAGHEVVVLERQDGAALETSFANA----GEISPGYASPW- 55
Query: 116 EHSMIFAMPNKPGEFSRFDF---------PEVLPAPLNGILAILRN 152
A P P + ++ P + PA L+ +LA+LRN
Sbjct: 56 ------ASPGVPRKAPKWLLARHAPLIVRPSLDPALLSWLLAMLRN 95
>sp|Q6STF1|OXLA_GLOHA L-amino-acid oxidase OS=Gloydius halys PE=1 SV=1
Length = 504
Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
S P VV+ GAG++GLS A L+ AGH+ +LEA + G +N
Sbjct: 49 SNPKHVVVVGAGMSGLSAAYVLSGAGHQVTVLEASERAGGRVRTYRN 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,334,225
Number of Sequences: 539616
Number of extensions: 8491860
Number of successful extensions: 24436
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 24037
Number of HSP's gapped (non-prelim): 365
length of query: 508
length of database: 191,569,459
effective HSP length: 122
effective length of query: 386
effective length of database: 125,736,307
effective search space: 48534214502
effective search space used: 48534214502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)