Query 010539
Match_columns 508
No_of_seqs 290 out of 3126
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 08:59:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 2.8E-35 9.6E-40 292.4 39.5 396 58-487 1-424 (425)
2 1s3e_A Amine oxidase [flavin-c 100.0 5.5E-35 1.9E-39 297.2 30.8 408 56-492 3-456 (520)
3 3nrn_A Uncharacterized protein 100.0 2.9E-32 9.8E-37 270.0 38.2 380 58-486 1-403 (421)
4 3nks_A Protoporphyrinogen oxid 100.0 2.1E-33 7E-38 283.2 27.5 398 57-489 2-473 (477)
5 3i6d_A Protoporphyrinogen oxid 100.0 5.1E-34 1.7E-38 287.3 22.9 402 56-490 4-468 (470)
6 2vvm_A Monoamine oxidase N; FA 100.0 2.6E-33 8.8E-38 283.5 28.0 405 56-492 38-487 (495)
7 2yg5_A Putrescine oxidase; oxi 100.0 4.9E-33 1.7E-37 278.5 28.6 406 56-491 4-452 (453)
8 2ivd_A PPO, PPOX, protoporphyr 100.0 1.1E-32 3.7E-37 277.9 29.4 399 55-492 14-475 (478)
9 3lov_A Protoporphyrinogen oxid 100.0 3.5E-33 1.2E-37 281.2 21.8 404 56-492 3-467 (475)
10 4dgk_A Phytoene dehydrogenase; 100.0 1.6E-31 5.4E-36 271.1 33.0 244 241-495 213-496 (501)
11 1sez_A Protoporphyrinogen oxid 100.0 3.7E-33 1.3E-37 283.2 18.3 406 56-493 12-496 (504)
12 4gde_A UDP-galactopyranose mut 100.0 8.1E-31 2.8E-35 266.9 18.3 400 54-488 7-477 (513)
13 3k7m_X 6-hydroxy-L-nicotine ox 100.0 1.8E-28 6.3E-33 243.7 33.2 390 57-489 1-425 (431)
14 2jae_A L-amino acid oxidase; o 100.0 3.6E-30 1.2E-34 260.1 19.5 241 239-493 229-488 (489)
15 2iid_A L-amino-acid oxidase; f 100.0 3.8E-29 1.3E-33 253.2 26.5 406 56-492 32-486 (498)
16 1b37_A Protein (polyamine oxid 100.0 2.1E-29 7.1E-34 253.0 21.8 233 248-492 204-460 (472)
17 4gut_A Lysine-specific histone 100.0 7.7E-29 2.6E-33 258.4 22.4 223 256-488 536-775 (776)
18 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.1E-27 3.6E-32 230.4 26.1 222 249-489 111-341 (342)
19 4dsg_A UDP-galactopyranose mut 100.0 1.2E-28 4E-33 246.8 19.8 395 55-487 7-452 (484)
20 1rsg_A FMS1 protein; FAD bindi 100.0 3.2E-28 1.1E-32 246.9 20.3 242 249-493 201-510 (516)
21 2xag_A Lysine-specific histone 99.9 5.4E-26 1.8E-30 238.3 28.2 236 242-494 565-833 (852)
22 2z3y_A Lysine-specific histone 99.9 2.6E-25 8.8E-30 230.8 29.8 232 243-491 395-659 (662)
23 3ayj_A Pro-enzyme of L-phenyla 99.9 3.9E-25 1.3E-29 225.3 17.9 255 237-494 335-683 (721)
24 1yvv_A Amine oxidase, flavin-c 99.9 2.4E-23 8.2E-28 199.7 26.6 218 254-493 110-330 (336)
25 2b9w_A Putative aminooxidase; 99.9 3.6E-23 1.2E-27 205.0 23.5 387 56-487 5-423 (424)
26 2bcg_G Secretory pathway GDP d 99.9 1.5E-18 5.2E-23 172.4 33.1 366 56-487 10-438 (453)
27 3p1w_A Rabgdi protein; GDI RAB 99.8 5.4E-19 1.8E-23 173.2 22.5 245 53-307 16-313 (475)
28 1v0j_A UDP-galactopyranose mut 99.8 5.6E-20 1.9E-24 179.5 9.9 343 56-491 6-388 (399)
29 1d5t_A Guanine nucleotide diss 99.8 1.4E-17 4.9E-22 164.3 27.2 364 56-487 5-427 (433)
30 2bi7_A UDP-galactopyranose mut 99.8 1.9E-18 6.7E-23 167.4 18.0 229 57-342 3-260 (384)
31 1i8t_A UDP-galactopyranose mut 99.8 7.3E-19 2.5E-23 169.5 14.2 233 58-345 2-260 (367)
32 2gag_B Heterotetrameric sarcos 99.7 7.5E-16 2.6E-20 151.4 23.6 201 248-488 172-374 (405)
33 3hdq_A UDP-galactopyranose mut 99.7 1.9E-16 6.5E-21 152.3 18.2 334 55-488 27-389 (397)
34 3dje_A Fructosyl amine: oxygen 99.7 2.5E-15 8.6E-20 149.2 25.4 65 248-314 159-226 (438)
35 3nlc_A Uncharacterized protein 99.7 3.9E-15 1.3E-19 149.1 25.1 58 250-308 220-277 (549)
36 1y56_B Sarcosine oxidase; dehy 99.7 2.8E-15 9.7E-20 146.0 22.3 205 248-489 147-355 (382)
37 3dme_A Conserved exported prot 99.7 1.4E-16 4.9E-21 154.5 12.3 61 248-309 148-210 (369)
38 3ps9_A TRNA 5-methylaminomethy 99.7 1.4E-13 4.7E-18 143.8 31.5 59 248-308 415-473 (676)
39 3pvc_A TRNA 5-methylaminomethy 99.6 1.4E-13 4.9E-18 143.8 30.0 59 248-308 410-469 (689)
40 2oln_A NIKD protein; flavoprot 99.6 5.2E-14 1.8E-18 137.8 24.8 59 248-309 151-209 (397)
41 1ryi_A Glycine oxidase; flavop 99.6 1.7E-14 5.9E-19 140.5 21.3 200 248-488 162-361 (382)
42 3nyc_A D-arginine dehydrogenas 99.6 1.1E-14 3.9E-19 141.7 19.3 59 248-309 152-210 (381)
43 3oz2_A Digeranylgeranylglycero 99.6 3.5E-14 1.2E-18 139.0 22.7 62 251-313 103-168 (397)
44 2gf3_A MSOX, monomeric sarcosi 99.6 1.8E-14 6.3E-19 140.7 19.8 204 248-488 148-363 (389)
45 3kkj_A Amine oxidase, flavin-c 99.6 1.6E-13 5.6E-18 128.2 24.8 39 57-95 2-40 (336)
46 3nix_A Flavoprotein/dehydrogen 99.6 1.1E-13 3.8E-18 136.6 23.1 66 249-314 105-173 (421)
47 3axb_A Putative oxidoreductase 99.6 1.8E-14 6.3E-19 143.4 15.7 61 248-309 179-255 (448)
48 3rp8_A Flavoprotein monooxygen 99.6 6.9E-15 2.4E-19 144.5 12.2 55 250-308 127-181 (407)
49 1vg0_A RAB proteins geranylger 99.6 1.8E-11 6.3E-16 123.5 36.5 219 147-385 276-507 (650)
50 2uzz_A N-methyl-L-tryptophan o 99.6 8.6E-14 2.9E-18 135.0 17.7 63 248-314 147-209 (372)
51 3i3l_A Alkylhalidase CMLS; fla 99.6 3E-13 1E-17 137.7 21.9 59 249-308 127-188 (591)
52 3cgv_A Geranylgeranyl reductas 99.5 6.3E-13 2.2E-17 130.1 22.0 59 249-308 101-162 (397)
53 3fmw_A Oxygenase; mithramycin, 99.5 3.6E-13 1.2E-17 136.9 20.3 63 250-314 148-214 (570)
54 3da1_A Glycerol-3-phosphate de 99.5 3.5E-13 1.2E-17 136.9 20.1 60 248-308 168-232 (561)
55 3ihg_A RDME; flavoenzyme, anth 99.5 3.4E-12 1.2E-16 129.7 26.4 66 249-314 119-190 (535)
56 2qa2_A CABE, polyketide oxygen 99.5 9.4E-12 3.2E-16 124.8 25.9 58 54-111 9-72 (499)
57 2rgh_A Alpha-glycerophosphate 99.5 2.5E-12 8.4E-17 131.0 21.5 61 248-309 186-251 (571)
58 2qa1_A PGAE, polyketide oxygen 99.5 4.2E-12 1.4E-16 127.3 22.9 58 54-111 8-71 (500)
59 2i0z_A NAD(FAD)-utilizing dehy 99.5 2.7E-13 9.4E-18 134.4 13.9 59 249-308 133-191 (447)
60 2e1m_A L-glutamate oxidase; L- 99.5 3E-13 1E-17 129.0 12.9 112 180-304 257-369 (376)
61 4at0_A 3-ketosteroid-delta4-5a 99.5 9.6E-13 3.3E-17 132.7 16.7 58 251-308 203-264 (510)
62 1k0i_A P-hydroxybenzoate hydro 99.5 1.8E-12 6.1E-17 126.7 18.2 63 251-314 104-170 (394)
63 1y0p_A Fumarate reductase flav 99.5 1.3E-12 4.4E-17 133.7 17.1 60 249-308 254-317 (571)
64 3v76_A Flavoprotein; structura 99.4 4E-13 1.4E-17 131.1 11.8 57 249-308 131-187 (417)
65 1qo8_A Flavocytochrome C3 fuma 99.4 1.5E-12 5.1E-17 133.0 15.6 60 249-308 249-312 (566)
66 3atr_A Conserved archaeal prot 99.4 3.5E-11 1.2E-15 119.6 23.2 64 250-314 100-169 (453)
67 2dkh_A 3-hydroxybenzoate hydro 99.4 1.4E-10 4.9E-15 119.9 27.5 55 56-110 31-92 (639)
68 3e1t_A Halogenase; flavoprotei 99.4 2.4E-11 8.1E-16 122.6 20.9 63 250-313 111-178 (512)
69 2qcu_A Aerobic glycerol-3-phos 99.4 2.9E-11 9.8E-16 121.6 21.3 60 248-309 147-211 (501)
70 1c0p_A D-amino acid oxidase; a 99.4 2.1E-11 7.3E-16 117.6 19.6 202 248-491 140-359 (363)
71 2gmh_A Electron transfer flavo 99.4 4.1E-11 1.4E-15 122.3 22.4 59 250-308 144-217 (584)
72 1pj5_A N,N-dimethylglycine oxi 99.3 1E-11 3.4E-16 132.7 15.8 59 248-308 149-207 (830)
73 4hb9_A Similarities with proba 99.3 9.3E-11 3.2E-15 115.2 21.7 49 264-313 123-172 (412)
74 2xdo_A TETX2 protein; tetracyc 99.3 9.4E-12 3.2E-16 121.6 14.2 55 55-109 24-87 (398)
75 3g3e_A D-amino-acid oxidase; F 99.3 7.4E-12 2.5E-16 120.2 13.2 190 248-492 140-336 (351)
76 1d4d_A Flavocytochrome C fumar 99.3 3.9E-11 1.3E-15 122.4 17.5 60 249-308 254-317 (572)
77 2wdq_A Succinate dehydrogenase 99.3 5.5E-11 1.9E-15 121.3 18.6 59 250-308 143-206 (588)
78 2r0c_A REBC; flavin adenine di 99.3 1.5E-10 5.1E-15 117.6 20.0 55 56-110 25-85 (549)
79 2gqf_A Hypothetical protein HI 99.3 3.5E-11 1.2E-15 117.0 14.6 59 249-309 108-169 (401)
80 4a9w_A Monooxygenase; baeyer-v 99.3 1.7E-11 6E-16 117.9 12.0 56 251-309 77-133 (357)
81 2vou_A 2,6-dihydroxypyridine h 99.3 5.8E-11 2E-15 116.0 15.8 55 56-110 4-65 (397)
82 2x3n_A Probable FAD-dependent 99.3 1.3E-11 4.6E-16 120.7 11.1 65 249-314 106-173 (399)
83 1rp0_A ARA6, thiazole biosynth 99.3 1.2E-11 4.2E-16 114.6 9.3 39 56-94 38-77 (284)
84 2weu_A Tryptophan 5-halogenase 99.2 1.3E-10 4.4E-15 117.5 17.0 60 249-309 172-231 (511)
85 3alj_A 2-methyl-3-hydroxypyrid 99.2 3.4E-11 1.2E-15 116.8 11.3 60 250-314 107-167 (379)
86 3c4n_A Uncharacterized protein 99.2 1.5E-11 5E-16 120.4 8.1 58 248-308 170-236 (405)
87 2h88_A Succinate dehydrogenase 99.2 3.5E-10 1.2E-14 115.5 18.3 59 250-309 155-218 (621)
88 2e4g_A Tryptophan halogenase; 99.2 1.4E-10 4.9E-15 117.8 15.4 60 249-309 193-253 (550)
89 4ap3_A Steroid monooxygenase; 99.2 5.9E-11 2E-15 120.1 12.4 57 251-307 100-158 (549)
90 4fk1_A Putative thioredoxin re 99.2 2E-11 7E-16 114.6 8.5 38 54-91 3-40 (304)
91 1pn0_A Phenol 2-monooxygenase; 99.2 5.2E-10 1.8E-14 115.8 19.4 55 56-110 7-72 (665)
92 2cul_A Glucose-inhibited divis 99.2 6.4E-11 2.2E-15 106.2 11.0 56 251-308 69-125 (232)
93 2aqj_A Tryptophan halogenase, 99.2 1.3E-10 4.3E-15 118.1 14.0 60 249-309 164-223 (538)
94 1chu_A Protein (L-aspartate ox 99.2 1E-10 3.4E-15 118.2 12.9 59 250-308 138-208 (540)
95 3gwf_A Cyclohexanone monooxyge 99.2 6.7E-11 2.3E-15 119.4 11.3 58 251-308 88-147 (540)
96 2bs2_A Quinol-fumarate reducta 99.2 3.9E-10 1.3E-14 116.0 17.1 58 250-308 158-220 (660)
97 3jsk_A Cypbp37 protein; octame 99.2 6.8E-11 2.3E-15 110.3 9.7 39 56-94 78-118 (344)
98 3uox_A Otemo; baeyer-villiger 99.2 7.1E-11 2.4E-15 119.3 10.2 57 251-307 88-146 (545)
99 2bry_A NEDD9 interacting prote 99.2 6.9E-11 2.4E-15 118.4 10.0 61 250-310 166-232 (497)
100 2ywl_A Thioredoxin reductase r 99.2 2.5E-10 8.7E-15 98.0 12.2 54 251-308 57-110 (180)
101 1mo9_A ORF3; nucleotide bindin 99.2 5.5E-10 1.9E-14 112.8 16.6 59 250-308 255-316 (523)
102 3o0h_A Glutathione reductase; 99.2 1.3E-10 4.6E-15 116.3 11.8 57 250-308 232-288 (484)
103 2pyx_A Tryptophan halogenase; 99.2 3.8E-10 1.3E-14 114.2 15.1 60 249-309 174-234 (526)
104 3ces_A MNMG, tRNA uridine 5-ca 99.1 1.5E-10 5.2E-15 116.9 11.6 60 250-311 124-184 (651)
105 2zxi_A TRNA uridine 5-carboxym 99.1 1.7E-10 6E-15 115.9 11.8 61 250-312 123-184 (637)
106 2gjc_A Thiazole biosynthetic e 99.1 1.4E-10 4.7E-15 107.7 10.1 39 56-94 64-104 (326)
107 3ab1_A Ferredoxin--NADP reduct 99.1 2.1E-10 7.2E-15 110.5 11.6 56 252-308 76-131 (360)
108 2zbw_A Thioredoxin reductase; 99.1 2.1E-10 7.2E-15 109.3 11.2 59 449-508 274-333 (335)
109 1w4x_A Phenylacetone monooxyge 99.1 1.6E-10 5.6E-15 117.2 10.8 42 55-96 14-55 (542)
110 3f8d_A Thioredoxin reductase ( 99.1 3.2E-10 1.1E-14 107.3 11.8 53 252-307 72-124 (323)
111 3lzw_A Ferredoxin--NADP reduct 99.1 2.1E-10 7.3E-15 109.0 9.9 55 251-307 68-122 (332)
112 3itj_A Thioredoxin reductase 1 99.1 1.1E-10 3.8E-15 111.3 7.5 36 55-90 20-55 (338)
113 3c96_A Flavin-containing monoo 99.1 5.5E-10 1.9E-14 109.5 12.5 53 56-108 3-62 (410)
114 2e1m_C L-glutamate oxidase; L- 99.1 3.2E-11 1.1E-15 102.7 2.6 102 388-493 48-155 (181)
115 1kf6_A Fumarate reductase flav 99.1 2.7E-09 9.3E-14 109.0 17.2 59 250-309 134-198 (602)
116 4dna_A Probable glutathione re 99.1 8.1E-10 2.8E-14 110.0 12.8 60 250-311 211-271 (463)
117 3k30_A Histamine dehydrogenase 99.0 2.1E-09 7.2E-14 112.2 15.3 65 31-95 363-429 (690)
118 1jnr_A Adenylylsulfate reducta 99.0 3.7E-09 1.3E-13 109.1 16.7 59 250-308 151-218 (643)
119 3klj_A NAD(FAD)-dependent dehy 99.0 1.1E-09 3.8E-14 105.8 12.1 48 256-307 68-115 (385)
120 3cp8_A TRNA uridine 5-carboxym 99.0 6.9E-10 2.4E-14 112.0 10.6 59 250-310 117-176 (641)
121 2q7v_A Thioredoxin reductase; 99.0 5.4E-10 1.8E-14 105.9 9.4 38 56-94 7-44 (325)
122 2q0l_A TRXR, thioredoxin reduc 99.0 4.6E-10 1.6E-14 105.7 8.6 52 253-307 62-113 (311)
123 2e5v_A L-aspartate oxidase; ar 99.0 2.9E-09 1E-13 105.8 14.5 59 249-309 118-177 (472)
124 3gyx_A Adenylylsulfate reducta 99.0 3.8E-09 1.3E-13 108.6 15.4 59 250-308 166-233 (662)
125 4a5l_A Thioredoxin reductase; 99.0 2.3E-09 8E-14 101.0 13.0 36 56-91 3-38 (314)
126 3d1c_A Flavin-containing putat 99.0 1.7E-09 5.9E-14 104.4 12.4 55 251-308 89-143 (369)
127 3fbs_A Oxidoreductase; structu 99.0 7.1E-10 2.4E-14 103.6 8.0 43 448-492 251-293 (297)
128 2gv8_A Monooxygenase; FMO, FAD 99.0 6.9E-10 2.3E-14 110.0 8.2 41 56-96 5-47 (447)
129 1vdc_A NTR, NADPH dependent th 99.0 7.5E-10 2.5E-14 105.4 7.3 52 252-307 72-123 (333)
130 2a87_A TRXR, TR, thioredoxin r 99.0 1.4E-09 4.6E-14 103.6 8.9 45 451-496 277-321 (335)
131 3s5w_A L-ornithine 5-monooxyge 99.0 3.6E-09 1.2E-13 105.5 12.2 38 56-93 29-71 (463)
132 1fl2_A Alkyl hydroperoxide red 99.0 8.4E-10 2.9E-14 103.8 7.2 54 254-307 60-114 (310)
133 3dk9_A Grase, GR, glutathione 98.9 4.3E-09 1.5E-13 105.3 12.4 59 250-308 228-293 (478)
134 3urh_A Dihydrolipoyl dehydroge 98.9 9.8E-09 3.3E-13 103.0 15.0 43 56-98 24-66 (491)
135 4gcm_A TRXR, thioredoxin reduc 98.9 2.4E-09 8E-14 100.8 9.4 48 447-495 263-310 (312)
136 1hyu_A AHPF, alkyl hydroperoxi 98.9 5.4E-09 1.8E-13 105.4 12.0 55 253-307 270-325 (521)
137 3r9u_A Thioredoxin reductase; 98.9 1.5E-09 5.1E-14 102.3 6.9 38 56-94 3-41 (315)
138 3cty_A Thioredoxin reductase; 98.9 1.7E-09 5.8E-14 102.2 7.2 34 56-89 15-48 (319)
139 1trb_A Thioredoxin reductase; 98.9 1.6E-09 5.6E-14 102.3 7.1 34 56-89 4-37 (320)
140 2xve_A Flavin-containing monoo 98.9 6.4E-09 2.2E-13 103.3 11.5 61 250-310 101-168 (464)
141 3lxd_A FAD-dependent pyridine 98.9 4.6E-09 1.6E-13 103.0 10.0 47 257-307 72-118 (415)
142 3lxd_A FAD-dependent pyridine 98.9 1.1E-08 3.8E-13 100.3 12.5 53 255-308 199-251 (415)
143 3fg2_P Putative rubredoxin red 98.9 9.8E-09 3.4E-13 100.2 11.9 54 254-308 188-241 (404)
144 1y56_A Hypothetical protein PH 98.9 1.8E-08 6.2E-13 100.8 14.1 51 256-308 263-313 (493)
145 1dxl_A Dihydrolipoamide dehydr 98.9 2E-08 6.7E-13 100.3 14.2 42 56-97 5-46 (470)
146 3ef6_A Toluene 1,2-dioxygenase 98.9 1E-08 3.5E-13 100.3 11.9 44 260-307 67-110 (410)
147 3ef6_A Toluene 1,2-dioxygenase 98.9 9E-09 3.1E-13 100.7 11.4 53 254-308 189-241 (410)
148 1xhc_A NADH oxidase /nitrite r 98.8 1.1E-08 3.7E-13 98.3 10.9 33 58-91 9-41 (367)
149 2qae_A Lipoamide, dihydrolipoy 98.8 3.2E-08 1.1E-12 98.7 14.6 41 57-97 2-42 (468)
150 3ics_A Coenzyme A-disulfide re 98.8 1.9E-08 6.6E-13 103.3 13.0 38 55-92 34-73 (588)
151 1q1r_A Putidaredoxin reductase 98.8 1.3E-08 4.4E-13 100.2 10.9 46 258-307 68-113 (431)
152 1v59_A Dihydrolipoamide dehydr 98.8 1.7E-08 5.9E-13 100.9 12.0 41 56-96 4-44 (478)
153 3fg2_P Putative rubredoxin red 98.8 1.4E-08 4.8E-13 99.1 11.1 35 58-92 2-38 (404)
154 3cgb_A Pyridine nucleotide-dis 98.8 2.5E-08 8.5E-13 99.6 13.1 36 57-92 36-73 (480)
155 3l8k_A Dihydrolipoyl dehydroge 98.8 5.5E-09 1.9E-13 104.0 8.2 41 57-97 4-44 (466)
156 2v3a_A Rubredoxin reductase; a 98.8 1.5E-08 5E-13 98.3 10.9 52 255-308 192-243 (384)
157 3qfa_A Thioredoxin reductase 1 98.8 8.4E-08 2.9E-12 96.6 16.7 35 56-90 31-65 (519)
158 3kd9_A Coenzyme A disulfide re 98.8 8E-09 2.7E-13 102.4 9.1 37 56-92 2-40 (449)
159 4b63_A L-ornithine N5 monooxyg 98.8 5.7E-09 1.9E-13 104.6 7.6 56 251-306 146-212 (501)
160 3lad_A Dihydrolipoamide dehydr 98.8 3.3E-08 1.1E-12 98.7 12.8 38 56-93 2-39 (476)
161 1ojt_A Surface protein; redox- 98.8 5.8E-08 2E-12 97.0 13.8 41 56-96 5-45 (482)
162 1ebd_A E3BD, dihydrolipoamide 98.8 5.6E-08 1.9E-12 96.5 13.2 38 57-95 3-40 (455)
163 1nhp_A NADH peroxidase; oxidor 98.8 5.9E-08 2E-12 96.1 13.3 35 58-92 1-37 (447)
164 2bc0_A NADH oxidase; flavoprot 98.8 3.1E-08 1.1E-12 99.2 11.3 37 56-92 34-73 (490)
165 3oc4_A Oxidoreductase, pyridin 98.8 1.9E-08 6.4E-13 99.8 9.5 35 58-92 3-39 (452)
166 3h8l_A NADH oxidase; membrane 98.8 2E-08 6.8E-13 98.3 9.5 43 449-491 293-336 (409)
167 1zmd_A Dihydrolipoyl dehydroge 98.8 8.6E-08 3E-12 95.7 14.3 41 56-96 5-45 (474)
168 3sx6_A Sulfide-quinone reducta 98.7 1.9E-08 6.5E-13 99.3 9.3 35 57-91 4-41 (437)
169 2a8x_A Dihydrolipoyl dehydroge 98.7 4.1E-08 1.4E-12 97.7 11.8 37 57-94 3-39 (464)
170 3h28_A Sulfide-quinone reducta 98.7 1.5E-08 5.3E-13 99.7 8.4 36 57-92 2-39 (430)
171 3dgz_A Thioredoxin reductase 2 98.7 8.8E-08 3E-12 95.9 14.0 34 55-88 4-37 (488)
172 3hyw_A Sulfide-quinone reducta 98.7 1.7E-08 5.8E-13 99.3 8.7 34 58-91 3-38 (430)
173 1q1r_A Putidaredoxin reductase 98.7 3.7E-08 1.3E-12 96.9 10.9 53 256-308 197-250 (431)
174 3ntd_A FAD-dependent pyridine 98.7 6.4E-08 2.2E-12 99.0 12.8 35 58-92 2-38 (565)
175 2gqw_A Ferredoxin reductase; f 98.7 8.6E-08 3E-12 93.6 13.1 48 255-308 192-239 (408)
176 2cdu_A NADPH oxidase; flavoenz 98.7 3.6E-08 1.2E-12 97.8 10.1 35 58-92 1-37 (452)
177 1zk7_A HGII, reductase, mercur 98.7 6.9E-08 2.3E-12 96.2 12.1 40 56-96 3-42 (467)
178 2yqu_A 2-oxoglutarate dehydrog 98.7 8.7E-08 3E-12 95.1 12.6 41 57-97 1-41 (455)
179 2hqm_A GR, grase, glutathione 98.7 4.6E-08 1.6E-12 97.7 10.3 41 56-97 10-50 (479)
180 1nhp_A NADH peroxidase; oxidor 98.7 5.6E-08 1.9E-12 96.2 10.8 55 255-312 196-250 (447)
181 3iwa_A FAD-dependent pyridine 98.7 3.5E-08 1.2E-12 98.4 9.4 36 57-92 3-40 (472)
182 2r9z_A Glutathione amide reduc 98.7 2.6E-07 9E-12 91.7 15.5 40 56-96 3-42 (463)
183 2cdu_A NADPH oxidase; flavoenz 98.7 5.8E-08 2E-12 96.3 10.7 57 255-313 196-252 (452)
184 2gqw_A Ferredoxin reductase; f 98.7 5.7E-08 1.9E-12 94.9 10.3 36 56-91 6-43 (408)
185 3oc4_A Oxidoreductase, pyridin 98.7 1E-07 3.6E-12 94.4 12.3 55 255-312 194-248 (452)
186 1coy_A Cholesterol oxidase; ox 98.7 4.4E-08 1.5E-12 98.3 9.4 62 251-312 227-297 (507)
187 2bc0_A NADH oxidase; flavoprot 98.7 8.5E-08 2.9E-12 96.0 11.5 51 255-308 241-291 (490)
188 1n4w_A CHOD, cholesterol oxida 98.7 3.7E-07 1.3E-11 91.6 16.0 62 251-312 222-292 (504)
189 3dgh_A TRXR-1, thioredoxin red 98.7 4.8E-07 1.6E-11 90.4 16.4 34 55-88 7-40 (483)
190 1lvl_A Dihydrolipoamide dehydr 98.6 2.2E-07 7.7E-12 92.1 13.5 41 56-97 4-44 (458)
191 1xdi_A RV3303C-LPDA; reductase 98.6 4.7E-08 1.6E-12 98.2 8.4 38 57-95 2-42 (499)
192 4g6h_A Rotenone-insensitive NA 98.6 7.7E-08 2.6E-12 96.2 9.8 56 249-306 271-330 (502)
193 2yqu_A 2-oxoglutarate dehydrog 98.6 1.6E-07 5.3E-12 93.2 11.8 54 256-311 214-267 (455)
194 4eqs_A Coenzyme A disulfide re 98.6 2.6E-07 8.7E-12 91.0 13.2 35 58-92 1-37 (437)
195 3iwa_A FAD-dependent pyridine 98.6 1.8E-07 6E-12 93.3 12.1 51 255-307 207-257 (472)
196 1fec_A Trypanothione reductase 98.6 3.8E-07 1.3E-11 91.2 14.5 32 56-87 2-34 (490)
197 2eq6_A Pyruvate dehydrogenase 98.6 3.2E-07 1.1E-11 91.1 13.7 37 57-94 6-42 (464)
198 1ges_A Glutathione reductase; 98.6 1.1E-07 3.6E-12 94.2 10.1 41 56-97 3-43 (450)
199 2hqm_A GR, grase, glutathione 98.6 2.7E-07 9.1E-12 92.1 12.8 52 256-307 232-284 (479)
200 2wpf_A Trypanothione reductase 98.6 3.1E-07 1.1E-11 91.9 13.3 32 56-87 6-38 (495)
201 1ges_A Glutathione reductase; 98.6 3.1E-07 1.1E-11 90.8 12.8 52 256-308 214-265 (450)
202 1kdg_A CDH, cellobiose dehydro 98.6 1.1E-07 3.8E-12 96.6 9.7 58 254-312 199-265 (546)
203 3qvp_A Glucose oxidase; oxidor 98.6 4.8E-07 1.7E-11 91.5 14.1 36 55-90 17-53 (583)
204 3pl8_A Pyranose 2-oxidase; sub 98.6 1.2E-06 4.2E-11 89.8 17.2 39 56-94 45-83 (623)
205 1m6i_A Programmed cell death p 98.6 6.8E-08 2.3E-12 96.6 7.1 38 55-92 9-48 (493)
206 1xdi_A RV3303C-LPDA; reductase 98.6 5.1E-07 1.7E-11 90.6 13.1 56 255-312 228-283 (499)
207 3vrd_B FCCB subunit, flavocyto 98.5 3.1E-07 1.1E-11 89.6 11.1 42 451-492 283-325 (401)
208 2r9z_A Glutathione amide reduc 98.5 4.6E-07 1.6E-11 89.9 12.4 51 256-308 213-264 (463)
209 2eq6_A Pyruvate dehydrogenase 98.5 4.8E-07 1.6E-11 89.9 12.1 52 256-309 216-272 (464)
210 1zmd_A Dihydrolipoyl dehydroge 98.5 5.6E-07 1.9E-11 89.7 12.4 36 57-92 178-213 (474)
211 1v59_A Dihydrolipoamide dehydr 98.5 5.3E-07 1.8E-11 90.0 12.0 36 57-92 183-218 (478)
212 2v3a_A Rubredoxin reductase; a 98.5 1.6E-07 5.5E-12 90.9 8.0 35 56-90 3-39 (384)
213 3fpz_A Thiazole biosynthetic e 98.5 5.6E-08 1.9E-12 91.9 4.5 41 56-96 64-106 (326)
214 2wpf_A Trypanothione reductase 98.5 7.5E-07 2.6E-11 89.2 12.9 53 255-308 240-292 (495)
215 1onf_A GR, grase, glutathione 98.5 7.7E-07 2.6E-11 89.2 13.0 54 256-310 223-277 (500)
216 1zk7_A HGII, reductase, mercur 98.5 6.1E-07 2.1E-11 89.3 12.1 53 255-310 221-273 (467)
217 1fec_A Trypanothione reductase 98.5 7.4E-07 2.5E-11 89.1 12.6 54 255-309 236-289 (490)
218 3ntd_A FAD-dependent pyridine 98.5 4.3E-07 1.5E-11 92.9 11.0 36 57-92 151-186 (565)
219 1onf_A GR, grase, glutathione 98.5 2.4E-07 8.3E-12 92.9 8.8 39 57-96 2-40 (500)
220 2gag_A Heterotetrameric sarcos 98.5 5E-07 1.7E-11 97.5 11.3 39 57-95 128-166 (965)
221 3cgb_A Pyridine nucleotide-dis 98.5 4.6E-07 1.6E-11 90.4 10.1 54 256-312 233-286 (480)
222 1ebd_A E3BD, dihydrolipoamide 98.5 7.6E-07 2.6E-11 88.3 11.3 36 57-92 170-205 (455)
223 2qae_A Lipoamide, dihydrolipoy 98.4 1.1E-06 3.9E-11 87.3 12.4 55 255-311 220-279 (468)
224 4b1b_A TRXR, thioredoxin reduc 98.4 1E-06 3.5E-11 88.4 10.9 56 255-312 268-323 (542)
225 2jbv_A Choline oxidase; alcoho 98.4 2.3E-06 7.7E-11 86.6 13.6 37 56-92 12-49 (546)
226 1ojt_A Surface protein; redox- 98.4 6.5E-07 2.2E-11 89.4 9.5 55 256-312 232-290 (482)
227 4eqs_A Coenzyme A disulfide re 98.4 1.8E-06 6.3E-11 84.8 12.4 49 254-308 192-240 (437)
228 2a8x_A Dihydrolipoyl dehydroge 98.4 1.8E-06 6.2E-11 85.8 12.4 36 57-92 171-206 (464)
229 1ju2_A HydroxynitrIle lyase; f 98.4 9.9E-07 3.4E-11 89.0 10.4 36 56-92 25-60 (536)
230 1lvl_A Dihydrolipoamide dehydr 98.4 1.1E-06 3.9E-11 87.0 10.6 36 57-92 171-206 (458)
231 4b1b_A TRXR, thioredoxin reduc 98.4 1.9E-06 6.4E-11 86.5 12.0 34 57-90 42-75 (542)
232 1xhc_A NADH oxidase /nitrite r 98.4 1.1E-06 3.6E-11 84.4 9.2 35 58-92 144-178 (367)
233 1m6i_A Programmed cell death p 98.3 2.2E-06 7.4E-11 85.7 11.6 51 256-308 232-282 (493)
234 1gte_A Dihydropyrimidine dehyd 98.3 2.4E-07 8.1E-12 100.8 4.6 39 56-94 186-225 (1025)
235 2x8g_A Thioredoxin glutathione 98.3 7.6E-06 2.6E-10 84.0 15.5 35 55-89 105-139 (598)
236 1trb_A Thioredoxin reductase; 98.3 4.3E-06 1.5E-10 78.6 12.2 51 256-307 190-246 (320)
237 1dxl_A Dihydrolipoamide dehydr 98.3 2E-06 6.8E-11 85.7 10.0 36 57-92 177-212 (470)
238 3ics_A Coenzyme A-disulfide re 98.3 3.3E-06 1.1E-10 86.6 11.8 49 255-307 233-281 (588)
239 3lad_A Dihydrolipoamide dehydr 98.3 5.2E-06 1.8E-10 82.8 12.9 52 255-308 226-280 (476)
240 3fim_B ARYL-alcohol oxidase; A 98.3 3.1E-06 1.1E-10 85.4 10.7 36 57-92 2-38 (566)
241 3urh_A Dihydrolipoyl dehydroge 98.3 5.4E-06 1.8E-10 83.0 12.1 36 57-92 198-233 (491)
242 3kd9_A Coenzyme A disulfide re 98.2 4.1E-06 1.4E-10 82.9 10.9 37 56-92 147-183 (449)
243 3ic9_A Dihydrolipoamide dehydr 98.2 6.5E-06 2.2E-10 82.3 12.4 36 57-92 174-209 (492)
244 2vdc_G Glutamate synthase [NAD 98.2 1.1E-06 3.6E-11 86.7 5.9 41 55-95 120-160 (456)
245 3klj_A NAD(FAD)-dependent dehy 98.2 3E-07 1E-11 88.7 1.3 36 57-92 146-181 (385)
246 3cty_A Thioredoxin reductase; 98.2 9.3E-06 3.2E-10 76.3 11.5 34 57-90 155-188 (319)
247 3itj_A Thioredoxin reductase 1 98.2 8.9E-06 3E-10 77.0 11.4 36 56-91 172-207 (338)
248 3dgh_A TRXR-1, thioredoxin red 98.2 1.7E-05 5.7E-10 79.2 13.5 53 256-309 233-290 (483)
249 1o94_A Tmadh, trimethylamine d 98.2 2E-06 6.8E-11 90.2 6.7 67 30-96 360-428 (729)
250 2zbw_A Thioredoxin reductase; 98.1 1.2E-05 4.1E-10 76.1 11.3 51 256-308 197-252 (335)
251 3ihm_A Styrene monooxygenase A 98.1 1.2E-06 4.2E-11 86.0 4.4 35 56-90 21-55 (430)
252 3s5w_A L-ornithine 5-monooxyge 98.1 3E-05 1E-09 77.0 13.6 37 56-92 226-264 (463)
253 1fl2_A Alkyl hydroperoxide red 98.1 2.1E-05 7.1E-10 73.5 11.8 34 57-90 144-177 (310)
254 3dgz_A Thioredoxin reductase 2 98.1 3.5E-05 1.2E-09 77.0 14.0 55 256-311 231-290 (488)
255 2q0l_A TRXR, thioredoxin reduc 98.1 2.4E-05 8.1E-10 73.2 12.0 34 57-90 143-176 (311)
256 3ab1_A Ferredoxin--NADP reduct 98.1 1.5E-05 5E-10 76.3 10.5 35 57-91 163-197 (360)
257 3c4a_A Probable tryptophan hyd 98.1 2.3E-06 7.9E-11 82.7 4.7 35 58-92 1-37 (381)
258 2q7v_A Thioredoxin reductase; 98.1 2.6E-05 8.9E-10 73.4 11.8 34 57-90 152-185 (325)
259 3ic9_A Dihydrolipoamide dehydr 98.1 1.3E-06 4.4E-11 87.4 2.7 73 237-312 196-278 (492)
260 1ps9_A 2,4-dienoyl-COA reducta 98.0 6.8E-06 2.3E-10 85.5 7.6 61 32-95 351-411 (671)
261 3g5s_A Methylenetetrahydrofola 98.0 4.2E-06 1.4E-10 78.5 5.2 36 57-92 1-36 (443)
262 3d1c_A Flavin-containing putat 98.0 2.1E-05 7E-10 75.6 9.6 36 57-92 166-201 (369)
263 1vdc_A NTR, NADPH dependent th 98.0 4.6E-05 1.6E-09 71.9 11.5 35 56-90 158-192 (333)
264 3r9u_A Thioredoxin reductase; 98.0 4.6E-05 1.6E-09 71.2 11.2 34 57-90 147-180 (315)
265 3qfa_A Thioredoxin reductase 1 97.9 9.8E-05 3.4E-09 74.2 13.8 32 58-89 211-242 (519)
266 3f8d_A Thioredoxin reductase ( 97.9 6.7E-05 2.3E-09 70.4 11.8 36 57-92 154-189 (323)
267 2x8g_A Thioredoxin glutathione 97.9 8.5E-05 2.9E-09 76.2 13.1 32 58-89 287-318 (598)
268 3uox_A Otemo; baeyer-villiger 97.9 6.9E-05 2.4E-09 75.6 11.7 50 253-309 341-392 (545)
269 2a87_A TRXR, TR, thioredoxin r 97.8 4.8E-05 1.6E-09 71.9 9.4 35 56-90 154-188 (335)
270 3l8k_A Dihydrolipoyl dehydroge 97.8 5E-05 1.7E-09 75.4 9.9 36 57-92 172-207 (466)
271 3lzw_A Ferredoxin--NADP reduct 97.8 6.5E-05 2.2E-09 70.8 10.0 34 57-90 154-187 (332)
272 1hyu_A AHPF, alkyl hydroperoxi 97.8 8.3E-05 2.9E-09 74.7 11.2 36 56-91 354-389 (521)
273 3gwf_A Cyclohexanone monooxyge 97.8 0.00022 7.6E-09 71.8 14.2 37 56-92 177-213 (540)
274 3fbs_A Oxidoreductase; structu 97.8 7.3E-05 2.5E-09 69.2 9.9 45 257-307 181-225 (297)
275 3t37_A Probable dehydrogenase; 97.8 1E-05 3.6E-10 81.8 4.0 37 56-92 16-53 (526)
276 1lqt_A FPRA; NADP+ derivative, 97.7 1.6E-05 5.6E-10 78.3 4.4 39 56-94 2-47 (456)
277 2gag_A Heterotetrameric sarcos 97.7 8.9E-05 3E-09 80.1 10.1 33 58-90 285-317 (965)
278 1cjc_A Protein (adrenodoxin re 97.7 0.00016 5.5E-09 71.3 10.8 37 56-92 144-201 (460)
279 1cjc_A Protein (adrenodoxin re 97.7 2.9E-05 1E-09 76.6 5.2 39 56-94 5-45 (460)
280 3q9t_A Choline dehydrogenase a 97.7 2.1E-05 7.3E-10 79.5 4.2 36 56-91 5-41 (577)
281 2vdc_G Glutamate synthase [NAD 97.7 9.1E-05 3.1E-09 72.9 8.2 43 452-496 407-449 (456)
282 2e1m_B L-glutamate oxidase; L- 97.6 6.8E-05 2.3E-09 58.9 5.3 104 293-413 4-110 (130)
283 4a5l_A Thioredoxin reductase; 97.6 0.0002 7E-09 66.8 9.5 35 56-90 151-185 (314)
284 1gte_A Dihydropyrimidine dehyd 97.6 0.00042 1.4E-08 75.4 12.8 33 58-90 333-366 (1025)
285 4ap3_A Steroid monooxygenase; 97.6 0.00021 7.2E-09 72.1 9.5 37 56-92 190-226 (549)
286 1o94_A Tmadh, trimethylamine d 97.5 0.00028 9.7E-09 73.9 10.0 35 56-90 527-563 (729)
287 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00042 1.4E-08 72.0 10.5 50 254-308 577-628 (671)
288 1gpe_A Protein (glucose oxidas 97.4 0.00011 3.6E-09 75.0 4.4 38 55-92 22-60 (587)
289 1lqt_A FPRA; NADP+ derivative, 97.3 0.00035 1.2E-08 68.8 7.2 37 56-92 146-203 (456)
290 2xve_A Flavin-containing monoo 97.2 0.0011 3.6E-08 65.6 8.9 36 56-91 196-231 (464)
291 4fk1_A Putative thioredoxin re 97.0 0.0022 7.5E-08 59.4 8.9 42 451-493 261-302 (304)
292 3h8l_A NADH oxidase; membrane 97.0 0.0029 9.8E-08 61.4 9.8 47 255-307 223-269 (409)
293 4gcm_A TRXR, thioredoxin reduc 96.9 0.0011 3.8E-08 61.7 5.8 38 58-95 146-183 (312)
294 3sx6_A Sulfide-quinone reducta 96.8 0.005 1.7E-07 60.3 10.5 49 256-306 214-267 (437)
295 4a9w_A Monooxygenase; baeyer-v 96.8 0.0034 1.2E-07 59.4 8.8 34 56-90 162-195 (357)
296 3fwz_A Inner membrane protein 96.8 0.0018 6.1E-08 52.2 5.7 36 56-91 6-41 (140)
297 3h28_A Sulfide-quinone reducta 96.8 0.004 1.4E-07 60.9 9.1 47 255-307 205-255 (430)
298 1w4x_A Phenylacetone monooxyge 96.7 0.013 4.4E-07 59.1 12.4 37 56-92 185-221 (542)
299 2g1u_A Hypothetical protein TM 96.6 0.0025 8.4E-08 52.4 5.4 37 55-91 17-53 (155)
300 1lss_A TRK system potassium up 96.4 0.0028 9.7E-08 50.8 4.7 34 57-90 4-37 (140)
301 3llv_A Exopolyphosphatase-rela 96.4 0.0036 1.2E-07 50.4 4.9 34 57-90 6-39 (141)
302 4b63_A L-ornithine N5 monooxyg 96.3 0.11 3.9E-06 51.5 16.3 35 56-90 245-281 (501)
303 3ic5_A Putative saccharopine d 96.2 0.0044 1.5E-07 48.0 4.2 34 57-90 5-39 (118)
304 1id1_A Putative potassium chan 96.1 0.0077 2.6E-07 49.2 5.5 33 57-89 3-35 (153)
305 3ado_A Lambda-crystallin; L-gu 95.9 0.0064 2.2E-07 56.1 4.7 36 56-91 5-40 (319)
306 1f0y_A HCDH, L-3-hydroxyacyl-C 95.9 0.0079 2.7E-07 55.5 5.2 35 56-90 14-48 (302)
307 2hmt_A YUAA protein; RCK, KTN, 95.8 0.0087 3E-07 48.1 4.7 34 57-90 6-39 (144)
308 3c85_A Putative glutathione-re 95.8 0.0091 3.1E-07 50.5 4.9 35 56-90 38-73 (183)
309 3k6j_A Protein F01G10.3, confi 95.5 0.016 5.4E-07 56.3 6.0 37 55-91 52-88 (460)
310 3lk7_A UDP-N-acetylmuramoylala 95.5 0.011 3.6E-07 58.1 4.8 51 56-109 8-58 (451)
311 2x5o_A UDP-N-acetylmuramoylala 95.5 0.0096 3.3E-07 58.2 4.3 36 57-92 5-40 (439)
312 3eag_A UDP-N-acetylmuramate:L- 95.4 0.027 9.3E-07 52.5 6.8 49 56-109 3-52 (326)
313 4e12_A Diketoreductase; oxidor 95.3 0.016 5.3E-07 53.0 5.0 34 57-90 4-37 (283)
314 3e8x_A Putative NAD-dependent 95.3 0.018 6.2E-07 50.9 5.1 36 56-91 20-56 (236)
315 2dpo_A L-gulonate 3-dehydrogen 95.3 0.015 5.3E-07 53.8 4.7 36 56-91 5-40 (319)
316 3l4b_C TRKA K+ channel protien 95.3 0.013 4.4E-07 51.2 4.1 33 58-90 1-33 (218)
317 1pzg_A LDH, lactate dehydrogen 95.2 0.021 7.3E-07 53.2 5.6 36 56-91 8-44 (331)
318 3doj_A AT3G25530, dehydrogenas 95.2 0.021 7.3E-07 52.8 5.4 37 55-91 19-55 (310)
319 3dk9_A Grase, GR, glutathione 95.1 0.031 1.1E-06 55.3 6.7 53 57-109 187-244 (478)
320 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.019 6.6E-07 52.3 4.5 34 56-90 11-44 (293)
321 3k96_A Glycerol-3-phosphate de 95.0 0.021 7.1E-07 53.9 4.7 35 56-90 28-62 (356)
322 1kyq_A Met8P, siroheme biosynt 94.8 0.019 6.4E-07 51.6 3.8 35 56-90 12-46 (274)
323 3i83_A 2-dehydropantoate 2-red 94.8 0.027 9.2E-07 52.4 5.0 33 58-90 3-35 (320)
324 4dio_A NAD(P) transhydrogenase 94.8 0.029 1E-06 53.2 5.2 35 56-90 189-223 (405)
325 2raf_A Putative dinucleotide-b 94.8 0.032 1.1E-06 48.2 5.0 36 56-91 18-53 (209)
326 3dfz_A SIRC, precorrin-2 dehyd 94.8 0.028 9.5E-07 48.8 4.6 34 56-89 30-63 (223)
327 2a9f_A Putative malic enzyme ( 94.7 0.03 1E-06 52.6 4.8 38 55-92 186-224 (398)
328 3p2y_A Alanine dehydrogenase/p 94.6 0.03 1E-06 52.7 4.8 35 56-90 183-217 (381)
329 1lld_A L-lactate dehydrogenase 94.6 0.031 1.1E-06 52.0 5.0 35 56-90 6-42 (319)
330 2y0c_A BCEC, UDP-glucose dehyd 94.6 0.029 1E-06 55.2 4.9 35 56-90 7-41 (478)
331 3ghy_A Ketopantoate reductase 94.5 0.036 1.2E-06 51.9 5.2 33 57-89 3-35 (335)
332 3hn2_A 2-dehydropantoate 2-red 94.5 0.028 9.5E-07 52.1 4.4 33 58-90 3-35 (312)
333 2ew2_A 2-dehydropantoate 2-red 94.5 0.031 1.1E-06 51.8 4.6 33 58-90 4-36 (316)
334 1ks9_A KPA reductase;, 2-dehyd 94.4 0.036 1.2E-06 50.7 5.0 33 59-91 2-34 (291)
335 3vtf_A UDP-glucose 6-dehydroge 94.4 0.039 1.3E-06 53.2 5.2 37 55-91 19-55 (444)
336 1zcj_A Peroxisomal bifunctiona 94.4 0.035 1.2E-06 54.5 5.0 36 56-91 36-71 (463)
337 2hjr_A Malate dehydrogenase; m 94.4 0.041 1.4E-06 51.2 5.2 35 57-91 14-49 (328)
338 1vl6_A Malate oxidoreductase; 94.4 0.038 1.3E-06 51.8 4.8 37 56-92 191-228 (388)
339 2gv8_A Monooxygenase; FMO, FAD 94.3 0.033 1.1E-06 54.6 4.7 37 56-92 211-248 (447)
340 3g17_A Similar to 2-dehydropan 94.3 0.037 1.3E-06 50.8 4.6 33 58-90 3-35 (294)
341 3g79_A NDP-N-acetyl-D-galactos 94.3 0.039 1.3E-06 54.0 4.9 36 56-91 17-54 (478)
342 4dna_A Probable glutathione re 94.2 0.063 2.1E-06 52.9 6.5 53 57-109 170-227 (463)
343 4e21_A 6-phosphogluconate dehy 94.2 0.041 1.4E-06 51.9 4.7 36 55-90 20-55 (358)
344 4dll_A 2-hydroxy-3-oxopropiona 94.2 0.038 1.3E-06 51.4 4.5 35 56-90 30-64 (320)
345 3gvi_A Malate dehydrogenase; N 94.1 0.052 1.8E-06 50.2 5.3 37 55-91 5-42 (324)
346 2ewd_A Lactate dehydrogenase,; 94.1 0.046 1.6E-06 50.7 4.9 34 57-90 4-38 (317)
347 3gg2_A Sugar dehydrogenase, UD 94.1 0.039 1.3E-06 53.8 4.6 34 58-91 3-36 (450)
348 3hwr_A 2-dehydropantoate 2-red 94.0 0.044 1.5E-06 50.9 4.6 34 56-90 18-51 (318)
349 2vns_A Metalloreductase steap3 94.0 0.058 2E-06 46.8 5.0 35 56-90 27-61 (215)
350 2v6b_A L-LDH, L-lactate dehydr 94.0 0.045 1.6E-06 50.4 4.6 33 58-90 1-35 (304)
351 1mo9_A ORF3; nucleotide bindin 94.0 0.047 1.6E-06 54.7 5.1 52 58-109 215-271 (523)
352 1t2d_A LDH-P, L-lactate dehydr 94.0 0.061 2.1E-06 49.9 5.4 34 57-90 4-38 (322)
353 3dtt_A NADP oxidoreductase; st 94.0 0.052 1.8E-06 48.2 4.8 35 56-90 18-52 (245)
354 1bg6_A N-(1-D-carboxylethyl)-L 93.9 0.048 1.6E-06 51.6 4.7 34 57-90 4-37 (359)
355 4ffl_A PYLC; amino acid, biosy 93.9 0.06 2.1E-06 51.0 5.4 36 57-92 1-36 (363)
356 4a7p_A UDP-glucose dehydrogena 93.9 0.058 2E-06 52.4 5.3 37 56-92 7-43 (446)
357 3g0o_A 3-hydroxyisobutyrate de 93.8 0.052 1.8E-06 50.0 4.7 35 56-90 6-40 (303)
358 3tl2_A Malate dehydrogenase; c 93.8 0.074 2.5E-06 49.0 5.6 34 56-89 7-41 (315)
359 3mog_A Probable 3-hydroxybutyr 93.8 0.055 1.9E-06 53.2 5.0 35 57-91 5-39 (483)
360 3pid_A UDP-glucose 6-dehydroge 93.7 0.05 1.7E-06 52.4 4.4 36 55-91 34-69 (432)
361 3pef_A 6-phosphogluconate dehy 93.7 0.065 2.2E-06 48.9 5.0 34 58-91 2-35 (287)
362 4g65_A TRK system potassium up 93.6 0.025 8.5E-07 55.4 2.2 36 56-91 2-37 (461)
363 3l6d_A Putative oxidoreductase 93.6 0.088 3E-06 48.5 5.8 35 56-90 8-42 (306)
364 3ego_A Probable 2-dehydropanto 93.5 0.06 2E-06 49.7 4.5 32 58-90 3-34 (307)
365 3l9w_A Glutathione-regulated p 93.5 0.064 2.2E-06 51.6 4.9 36 56-91 3-38 (413)
366 1z82_A Glycerol-3-phosphate de 93.5 0.069 2.4E-06 50.0 5.0 35 56-90 13-47 (335)
367 1x13_A NAD(P) transhydrogenase 93.5 0.074 2.5E-06 51.0 5.2 34 57-90 172-205 (401)
368 3pdu_A 3-hydroxyisobutyrate de 93.4 0.059 2E-06 49.2 4.3 34 58-91 2-35 (287)
369 1mv8_A GMD, GDP-mannose 6-dehy 93.4 0.054 1.9E-06 52.7 4.1 32 59-90 2-33 (436)
370 3ldh_A Lactate dehydrogenase; 93.3 0.11 3.8E-06 48.0 5.9 35 56-90 20-56 (330)
371 4g6h_A Rotenone-insensitive NA 93.3 0.088 3E-06 52.3 5.6 53 58-110 218-289 (502)
372 2h78_A Hibadh, 3-hydroxyisobut 93.3 0.062 2.1E-06 49.5 4.2 34 57-90 3-36 (302)
373 3oj0_A Glutr, glutamyl-tRNA re 93.3 0.032 1.1E-06 44.9 2.0 34 57-90 21-54 (144)
374 1txg_A Glycerol-3-phosphate de 93.3 0.064 2.2E-06 50.2 4.3 30 59-88 2-31 (335)
375 3p7m_A Malate dehydrogenase; p 93.2 0.1 3.4E-06 48.3 5.4 35 56-90 4-39 (321)
376 3c4a_A Probable tryptophan hyd 93.2 0.77 2.6E-05 43.6 11.9 51 250-313 98-148 (381)
377 2uyy_A N-PAC protein; long-cha 93.2 0.11 3.8E-06 48.1 5.8 34 57-90 30-63 (316)
378 1guz_A Malate dehydrogenase; o 93.1 0.087 3E-06 48.6 4.9 34 58-91 1-36 (310)
379 2i6t_A Ubiquitin-conjugating e 93.1 0.081 2.8E-06 48.5 4.6 36 56-91 13-50 (303)
380 3qha_A Putative oxidoreductase 93.1 0.061 2.1E-06 49.4 3.8 35 57-91 15-49 (296)
381 1pjc_A Protein (L-alanine dehy 93.1 0.086 2.9E-06 49.9 5.0 33 58-90 168-200 (361)
382 2wtb_A MFP2, fatty acid multif 93.1 0.081 2.8E-06 54.9 5.1 36 56-91 311-346 (725)
383 4huj_A Uncharacterized protein 93.1 0.049 1.7E-06 47.5 3.0 35 56-90 22-57 (220)
384 2qyt_A 2-dehydropantoate 2-red 93.1 0.058 2E-06 50.0 3.7 32 57-88 8-45 (317)
385 1nyt_A Shikimate 5-dehydrogena 93.1 0.1 3.4E-06 47.2 5.1 35 56-90 118-152 (271)
386 1ur5_A Malate dehydrogenase; o 93.0 0.099 3.4E-06 48.2 5.1 33 58-90 3-36 (309)
387 1jw9_B Molybdopterin biosynthe 93.0 0.084 2.9E-06 46.9 4.5 35 56-90 30-65 (249)
388 1l7d_A Nicotinamide nucleotide 93.0 0.099 3.4E-06 49.9 5.3 35 56-90 171-205 (384)
389 2o3j_A UDP-glucose 6-dehydroge 93.0 0.079 2.7E-06 52.2 4.6 35 56-90 8-44 (481)
390 1y6j_A L-lactate dehydrogenase 93.0 0.096 3.3E-06 48.5 4.9 35 56-90 6-42 (318)
391 3o0h_A Glutathione reductase; 92.9 0.098 3.4E-06 51.8 5.3 53 57-109 191-248 (484)
392 3dfu_A Uncharacterized protein 92.9 0.035 1.2E-06 48.4 1.7 34 56-89 5-38 (232)
393 1jay_A Coenzyme F420H2:NADP+ o 92.8 0.09 3.1E-06 45.4 4.3 32 59-90 2-34 (212)
394 3gpi_A NAD-dependent epimerase 92.8 0.12 4.1E-06 47.0 5.4 35 57-91 3-37 (286)
395 1a5z_A L-lactate dehydrogenase 92.8 0.09 3.1E-06 48.7 4.5 33 58-90 1-35 (319)
396 3qsg_A NAD-binding phosphogluc 92.8 0.09 3.1E-06 48.6 4.5 34 56-89 23-57 (312)
397 3pqe_A L-LDH, L-lactate dehydr 92.8 0.11 3.8E-06 48.0 5.0 35 56-90 4-40 (326)
398 2eez_A Alanine dehydrogenase; 92.8 0.1 3.6E-06 49.5 5.0 34 57-90 166-199 (369)
399 3phh_A Shikimate dehydrogenase 92.7 0.12 4.2E-06 46.2 5.1 34 57-90 118-151 (269)
400 1oju_A MDH, malate dehydrogena 92.7 0.089 3E-06 47.9 4.2 33 58-90 1-35 (294)
401 1hyh_A L-hicdh, L-2-hydroxyiso 92.6 0.1 3.4E-06 48.2 4.6 33 58-90 2-36 (309)
402 4ezb_A Uncharacterized conserv 92.6 0.11 3.6E-06 48.2 4.7 35 57-91 24-59 (317)
403 1dlj_A UDP-glucose dehydrogena 92.6 0.07 2.4E-06 51.3 3.6 31 59-90 2-32 (402)
404 4aj2_A L-lactate dehydrogenase 92.6 0.14 4.8E-06 47.4 5.5 36 55-90 17-54 (331)
405 3ggo_A Prephenate dehydrogenas 92.6 0.13 4.4E-06 47.6 5.2 35 56-90 32-68 (314)
406 3ius_A Uncharacterized conserv 92.5 0.11 3.7E-06 47.3 4.5 34 57-90 5-38 (286)
407 3c24_A Putative oxidoreductase 92.4 0.15 5E-06 46.5 5.4 34 57-90 11-45 (286)
408 1evy_A Glycerol-3-phosphate de 92.4 0.067 2.3E-06 50.8 3.1 32 59-90 17-48 (366)
409 2pv7_A T-protein [includes: ch 92.4 0.16 5.6E-06 46.5 5.6 34 57-90 21-55 (298)
410 3zwc_A Peroxisomal bifunctiona 92.3 0.13 4.5E-06 53.2 5.4 38 55-92 314-351 (742)
411 4gwg_A 6-phosphogluconate dehy 92.3 0.13 4.4E-06 50.4 5.0 36 56-91 3-38 (484)
412 1p77_A Shikimate 5-dehydrogena 92.2 0.11 3.7E-06 46.9 4.2 35 56-90 118-152 (272)
413 1wdk_A Fatty oxidation complex 92.2 0.11 3.7E-06 53.9 4.6 36 56-91 313-348 (715)
414 2vhw_A Alanine dehydrogenase; 92.2 0.14 4.7E-06 48.7 5.0 35 56-90 167-201 (377)
415 3ktd_A Prephenate dehydrogenas 92.2 0.14 5E-06 47.6 5.0 35 56-90 7-41 (341)
416 3nep_X Malate dehydrogenase; h 92.1 0.13 4.4E-06 47.3 4.6 33 58-90 1-35 (314)
417 3ew7_A LMO0794 protein; Q8Y8U8 92.1 0.16 5.6E-06 43.9 5.0 32 59-90 2-34 (221)
418 2f1k_A Prephenate dehydrogenas 92.0 0.13 4.5E-06 46.6 4.6 32 59-90 2-33 (279)
419 2egg_A AROE, shikimate 5-dehyd 92.0 0.14 4.9E-06 46.7 4.8 35 56-90 140-175 (297)
420 1yqg_A Pyrroline-5-carboxylate 92.0 0.12 4.1E-06 46.4 4.2 32 59-90 2-34 (263)
421 3vku_A L-LDH, L-lactate dehydr 92.0 0.14 4.8E-06 47.3 4.7 35 56-90 8-44 (326)
422 2zyd_A 6-phosphogluconate dehy 91.8 0.12 4.1E-06 50.8 4.2 35 56-90 14-48 (480)
423 2g5c_A Prephenate dehydrogenas 91.8 0.16 5.4E-06 46.1 4.7 33 58-90 2-36 (281)
424 2q3e_A UDP-glucose 6-dehydroge 91.7 0.12 4E-06 50.8 4.1 34 57-90 5-40 (467)
425 1pjq_A CYSG, siroheme synthase 91.7 0.15 5E-06 49.9 4.7 34 56-89 11-44 (457)
426 3fi9_A Malate dehydrogenase; s 91.7 0.19 6.5E-06 46.8 5.2 35 56-90 7-44 (343)
427 2rcy_A Pyrroline carboxylate r 91.7 0.16 5.4E-06 45.5 4.6 35 57-91 4-42 (262)
428 1ldn_A L-lactate dehydrogenase 91.6 0.2 6.8E-06 46.3 5.2 35 56-90 5-41 (316)
429 1hdo_A Biliverdin IX beta redu 91.6 0.23 8E-06 42.3 5.4 33 58-90 4-37 (206)
430 3h2s_A Putative NADH-flavin re 91.5 0.19 6.6E-06 43.6 4.9 32 59-90 2-34 (224)
431 2qrj_A Saccharopine dehydrogen 91.5 0.18 6.1E-06 47.6 4.8 35 56-90 213-251 (394)
432 2izz_A Pyrroline-5-carboxylate 91.5 0.18 6E-06 46.9 4.8 35 56-90 21-59 (322)
433 3don_A Shikimate dehydrogenase 91.5 0.17 5.8E-06 45.6 4.5 35 56-90 116-151 (277)
434 1yj8_A Glycerol-3-phosphate de 91.4 0.13 4.4E-06 49.0 3.9 34 58-91 22-62 (375)
435 2aef_A Calcium-gated potassium 91.4 0.086 2.9E-06 46.4 2.5 35 56-91 8-42 (234)
436 3cky_A 2-hydroxymethyl glutara 91.4 0.15 5.2E-06 46.7 4.3 34 57-90 4-37 (301)
437 3d0o_A L-LDH 1, L-lactate dehy 91.4 0.18 6.3E-06 46.5 4.8 35 56-90 5-41 (317)
438 2gf2_A Hibadh, 3-hydroxyisobut 91.4 0.17 5.7E-06 46.3 4.5 32 59-90 2-33 (296)
439 3tri_A Pyrroline-5-carboxylate 91.4 0.22 7.7E-06 45.1 5.3 34 57-90 3-39 (280)
440 2p4q_A 6-phosphogluconate dehy 91.3 0.19 6.6E-06 49.5 5.1 35 56-90 9-43 (497)
441 1x0v_A GPD-C, GPDH-C, glycerol 91.3 0.11 3.7E-06 49.0 3.2 34 58-91 9-49 (354)
442 3k30_A Histamine dehydrogenase 91.3 0.26 8.8E-06 51.2 6.3 54 56-109 522-583 (690)
443 4id9_A Short-chain dehydrogena 91.3 0.19 6.6E-06 47.0 5.0 37 55-91 17-54 (347)
444 2hk9_A Shikimate dehydrogenase 91.2 0.18 6E-06 45.6 4.4 35 56-90 128-162 (275)
445 1vpd_A Tartronate semialdehyde 91.2 0.15 5.3E-06 46.7 4.1 33 58-90 6-38 (299)
446 2rir_A Dipicolinate synthase, 91.2 0.23 7.7E-06 45.6 5.1 35 56-90 156-190 (300)
447 2pzm_A Putative nucleotide sug 91.2 0.23 8E-06 46.1 5.4 36 55-90 18-54 (330)
448 2cvz_A Dehydrogenase, 3-hydrox 91.1 0.16 5.5E-06 46.2 4.1 32 58-90 2-33 (289)
449 3gt0_A Pyrroline-5-carboxylate 91.1 0.22 7.5E-06 44.2 4.9 33 58-90 3-39 (247)
450 3ond_A Adenosylhomocysteinase; 91.1 0.2 7E-06 48.6 4.8 35 56-90 264-298 (488)
451 3d4o_A Dipicolinate synthase s 91.0 0.24 8.4E-06 45.2 5.2 35 56-90 154-188 (293)
452 1edz_A 5,10-methylenetetrahydr 91.0 0.19 6.4E-06 46.0 4.3 34 56-89 176-210 (320)
453 3u62_A Shikimate dehydrogenase 90.9 0.26 8.8E-06 43.8 5.1 32 59-90 110-142 (253)
454 3tnl_A Shikimate dehydrogenase 90.9 0.25 8.6E-06 45.4 5.2 34 56-89 153-187 (315)
455 2pgd_A 6-phosphogluconate dehy 90.9 0.2 7E-06 49.3 4.9 33 58-90 3-35 (482)
456 2zqz_A L-LDH, L-lactate dehydr 90.9 0.23 8E-06 46.0 5.0 35 55-89 7-43 (326)
457 3pwz_A Shikimate dehydrogenase 90.8 0.27 9.1E-06 44.2 5.1 35 56-90 119-154 (272)
458 3jyo_A Quinate/shikimate dehyd 90.7 0.27 9.2E-06 44.5 5.1 35 56-90 126-161 (283)
459 1ez4_A Lactate dehydrogenase; 90.7 0.22 7.4E-06 46.0 4.5 35 56-90 4-40 (318)
460 2ahr_A Putative pyrroline carb 90.7 0.18 6E-06 45.1 3.9 34 57-90 3-36 (259)
461 4hv4_A UDP-N-acetylmuramate--L 90.6 0.17 5.8E-06 50.1 4.0 49 56-110 21-70 (494)
462 3ojo_A CAP5O; rossmann fold, c 90.6 0.17 6E-06 48.7 3.9 35 58-92 12-46 (431)
463 3fbt_A Chorismate mutase and s 90.6 0.25 8.5E-06 44.6 4.7 35 56-90 121-156 (282)
464 1y1p_A ARII, aldehyde reductas 90.6 0.39 1.3E-05 44.7 6.3 36 55-90 9-45 (342)
465 4gbj_A 6-phosphogluconate dehy 90.5 0.19 6.5E-06 46.0 4.0 35 58-92 6-40 (297)
466 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.5 0.2 6.9E-06 49.2 4.3 33 58-90 2-34 (478)
467 2x0j_A Malate dehydrogenase; o 90.5 0.23 7.8E-06 45.1 4.4 33 58-90 1-35 (294)
468 1nvt_A Shikimate 5'-dehydrogen 90.5 0.19 6.6E-06 45.7 4.0 34 56-90 127-160 (287)
469 4b4o_A Epimerase family protei 90.4 0.27 9.4E-06 44.9 5.0 34 58-91 1-35 (298)
470 3c7a_A Octopine dehydrogenase; 90.4 0.13 4.4E-06 49.5 2.9 30 58-87 3-33 (404)
471 3h8v_A Ubiquitin-like modifier 90.4 0.21 7.3E-06 45.2 4.1 35 56-90 35-70 (292)
472 2dvm_A Malic enzyme, 439AA lon 90.4 0.28 9.7E-06 47.1 5.1 35 56-90 185-226 (439)
473 3dhn_A NAD-dependent epimerase 90.4 0.22 7.5E-06 43.3 4.2 35 57-91 4-39 (227)
474 3o8q_A Shikimate 5-dehydrogena 90.4 0.28 9.6E-06 44.3 4.9 35 56-90 125-160 (281)
475 3d1l_A Putative NADP oxidoredu 90.3 0.2 6.8E-06 45.0 3.9 33 58-90 11-44 (266)
476 3rui_A Ubiquitin-like modifier 90.3 0.3 1E-05 45.2 5.0 35 56-90 33-68 (340)
477 2d4a_B Malate dehydrogenase; a 90.3 0.25 8.5E-06 45.4 4.5 32 59-90 1-33 (308)
478 1yb4_A Tartronic semialdehyde 90.2 0.17 5.7E-06 46.3 3.3 32 58-90 4-35 (295)
479 1np3_A Ketol-acid reductoisome 90.1 0.31 1E-05 45.5 5.1 34 57-90 16-49 (338)
480 2iz1_A 6-phosphogluconate dehy 90.1 0.26 8.8E-06 48.5 4.7 34 57-90 5-38 (474)
481 1i36_A Conserved hypothetical 90.1 0.24 8.2E-06 44.4 4.2 30 59-88 2-31 (264)
482 1zud_1 Adenylyltransferase THI 90.0 0.28 9.7E-06 43.5 4.5 35 56-90 27-62 (251)
483 1leh_A Leucine dehydrogenase; 89.9 0.33 1.1E-05 45.6 5.1 34 56-89 172-205 (364)
484 3t4e_A Quinate/shikimate dehyd 89.9 0.36 1.2E-05 44.3 5.2 34 56-89 147-181 (312)
485 3obb_A Probable 3-hydroxyisobu 89.9 0.26 8.7E-06 45.1 4.2 34 57-90 3-36 (300)
486 3i6i_A Putative leucoanthocyan 89.9 0.33 1.1E-05 45.5 5.2 35 56-90 9-44 (346)
487 1mld_A Malate dehydrogenase; o 89.8 0.25 8.7E-06 45.5 4.2 33 58-90 1-36 (314)
488 3vps_A TUNA, NAD-dependent epi 89.8 0.35 1.2E-05 44.6 5.3 36 56-91 6-42 (321)
489 2d5c_A AROE, shikimate 5-dehyd 89.8 0.32 1.1E-05 43.5 4.8 32 59-90 118-149 (263)
490 3rkr_A Short chain oxidoreduct 89.7 0.33 1.1E-05 43.4 4.8 35 56-90 28-63 (262)
491 1lu9_A Methylene tetrahydromet 89.7 0.37 1.3E-05 43.8 5.2 35 56-90 118-153 (287)
492 3r6d_A NAD-dependent epimerase 89.3 0.51 1.7E-05 40.8 5.7 33 58-90 6-40 (221)
493 3gvp_A Adenosylhomocysteinase 89.2 0.34 1.1E-05 46.2 4.6 35 56-90 219-253 (435)
494 3qvo_A NMRA family protein; st 89.2 0.24 8E-06 43.5 3.4 35 56-90 22-58 (236)
495 3b1f_A Putative prephenate deh 89.2 0.3 1E-05 44.4 4.3 34 57-90 6-41 (290)
496 3q2o_A Phosphoribosylaminoimid 89.1 0.51 1.8E-05 45.0 6.0 36 56-91 13-48 (389)
497 1npy_A Hypothetical shikimate 89.1 0.38 1.3E-05 43.2 4.7 33 57-89 119-152 (271)
498 2dkn_A 3-alpha-hydroxysteroid 89.1 0.42 1.4E-05 42.3 5.0 33 58-90 2-35 (255)
499 3hyw_A Sulfide-quinone reducta 89.1 0.26 8.8E-06 47.9 3.9 53 251-307 201-255 (430)
500 3ce6_A Adenosylhomocysteinase; 89.0 0.34 1.1E-05 47.5 4.6 35 56-90 273-307 (494)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=2.8e-35 Score=292.41 Aligned_cols=396 Identities=18% Similarity=0.259 Sum_probs=269.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----------------------hhHHHHHHHcCCCCcccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----------------------PNIQNLFGELGINDRLQW 114 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----------------------~~~~~l~~~lg~~~~~~~ 114 (508)
+||||||||++||+||++|+++|++|+|||+++.++|.. ..+.++++++|+...+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 589999999999999999999999999999998875432 245788889987654333
Q ss_pred cccccee-ecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHHH
Q 010539 115 KEHSMIF-AMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 193 (508)
Q Consensus 115 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (508)
......+ ........+. ... ....+.. ....+...++.+.......... ...+..++.+|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~~l~~ 144 (425)
T 3ka7_A 81 SEMTTVRVPLKKGNPDYV---KGF-KDISFND------FPSLLSYKDRMKIALLIVSTRK------NRPSGSSLQAWIKS 144 (425)
T ss_dssp CCCCEEEEESSTTCCSST---TCE-EEEEGGG------GGGGSCHHHHHHHHHHHHHTTT------SCCCSSBHHHHHHH
T ss_pred cCCceEEeecCCCccccc---ccc-cceehhh------hhhhCCHHHHHHHHHHHHhhhh------cCCCCCCHHHHHHH
Confidence 2211111 1111000000 000 0000000 0112233333333222111000 12246799999998
Q ss_pred cCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhhccCCeEEeecCCccccchHHHHHHHHHcCCEEEeCcee
Q 010539 194 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 273 (508)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V 273 (508)
. +.....+.++.++....+..++++++.......+..... .+. ..++.+| +..+++.|.+.++++|++|+++++|
T Consensus 145 ~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 219 (425)
T 3ka7_A 145 Q-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIHTGQEV 219 (425)
T ss_dssp H-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred h-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEEECCce
Confidence 7 556667777888887778889999998766655554321 222 3456665 7889999999999999999999999
Q ss_pred eEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcch-h--ccHHHHHHhhcCCcCEEEEEEEeccccccccc
Q 010539 274 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW-K--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD 350 (508)
Q Consensus 274 ~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~-~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 350 (508)
++|.. +++.+++|++. |+++.||.||+|+|++.+.+|+++.. . +..+.+++.++.+.+..+++++++++++.. .
T Consensus 220 ~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~ 296 (425)
T 3ka7_A 220 SKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH-T 296 (425)
T ss_dssp EEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS-S
T ss_pred eEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc-C
Confidence 99998 45666678775 76899999999999999999987432 1 446678888898888899999999987543 3
Q ss_pred ccccccCc-cceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeE
Q 010539 351 HLLFSRSS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHV 429 (508)
Q Consensus 351 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
++++..+. ....+...+..++.++|+|.+++.+......+..+. .++.++.++++|.+++|.. .. ....+
T Consensus 297 ~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~-~~-------~~~~v 367 (425)
T 3ka7_A 297 GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGK-RY-------EVLLI 367 (425)
T ss_dssp SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTC-CE-------EEEEE
T ss_pred EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCC-ce-------EEEEE
Confidence 33443322 122234556678889999998887654332222222 2455799999999999872 21 22355
Q ss_pred eecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHH
Q 010539 430 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 487 (508)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il 487 (508)
.+|+.+.+.+.++.. .++..++|++|||+||+++.+.+..+|++|+.||++||++|+
T Consensus 368 ~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 368 QSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 678888888877743 446678899999999999999766899999999999999986
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=5.5e-35 Score=297.23 Aligned_cols=408 Identities=18% Similarity=0.222 Sum_probs=257.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC----------------------hhHHHHHHHcCCCCccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY----------------------PNIQNLFGELGINDRLQ 113 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~----------------------~~~~~l~~~lg~~~~~~ 113 (508)
.++||||||||++||+||+.|+++|++|+|||++++++|.. ..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 35799999999999999999999999999999999886542 34567888888865433
Q ss_pred cccccceeecCCCCCCcccccCCCCCCC---chh--HHHHHHhcCCCCChHHHHHHhhcchh-hHhcCcchhhcccCccH
Q 010539 114 WKEHSMIFAMPNKPGEFSRFDFPEVLPA---PLN--GILAILRNNEMLTWPEKVKFAIGLLP-AIIGGQAYVEAQDGLTV 187 (508)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (508)
......++... +. .+.+....+. +.. .+..++. .+..+..... ............+..++
T Consensus 83 ~~~~~~~~~~~---g~--~~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHVK---GK--SYPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEET---TE--EEEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEEC---CE--EEEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 22222222111 11 1112111221 110 0111110 0000000000 00000011122457899
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHH------hhhccCCeEEeecCCccccchHHHHHHHH
Q 010539 188 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQ 261 (508)
Q Consensus 188 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~g~~~~~l~~~l~~~l~ 261 (508)
.+|+++.+.... .+.++..+....++.++++++..+....+... +....+....++.+| ...+++.|.+.+
T Consensus 149 ~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l- 225 (520)
T 1s3e_A 149 KELLDKLCWTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERIMDLL- 225 (520)
T ss_dssp HHHHHHHCSSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHHHHHH-
T ss_pred HHHHHhhCCCHH-HHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHHHHHHHHHHc-
Confidence 999999866544 46677888888888899999987765443211 111123334455555 677777777655
Q ss_pred HcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEe
Q 010539 262 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWF 341 (508)
Q Consensus 262 ~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 341 (508)
|++|+++++|++|..+++ .+ .|++.+|+++.||+||+|+|+..+.+|+.++..+....++++++.+.++.++++.|
T Consensus 226 --g~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~ 301 (520)
T 1s3e_A 226 --GDRVKLERPVIYIDQTRE-NV-LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYY 301 (520)
T ss_dssp --GGGEESSCCEEEEECSSS-SE-EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEEC
T ss_pred --CCcEEcCCeeEEEEECCC-eE-EEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEe
Confidence 789999999999997443 44 38888888899999999999999988875444444566788889999999999999
Q ss_pred ccccccccc--cccc--ccCccceeecccccccccccCCC-ccEEEEEecC--chhhcCCChHHHHHHHHHHHHHhCCCC
Q 010539 342 DRKLKNTYD--HLLF--SRSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDE 414 (508)
Q Consensus 342 ~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~ 414 (508)
++++|+..+ +..+ ........+++.+ .+++ ..++..++.+ ++.|.+++++++.+.++++|.++||..
T Consensus 302 ~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~------~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~ 375 (520)
T 1s3e_A 302 KEPFWRKKDYCGTMIIDGEEAPVAYTLDDT------KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSL 375 (520)
T ss_dssp SSCGGGGGTEEEEEEECSTTCSCSEEEECC------CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCG
T ss_pred CCCcccCCCCCceeeccCCCCceEEEeeCC------CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcc
Confidence 999986432 2222 1112222222211 2233 2455444443 367888899999999999999999863
Q ss_pred cccccccceEEEeeEeecCC--ceec--cCCCC-CCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHH
Q 010539 415 ISADQSKAKIVKYHVVKTPR--SVYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 489 (508)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~-~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~ 489 (508)
....+. .+....|...+. +.+. +.++. ....+.+++|++||||||++++..|.++|+||+.||++||++|++.
T Consensus 376 ~~~~p~--~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~ 453 (520)
T 1s3e_A 376 EALEPV--HYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 453 (520)
T ss_dssp GGGCCS--EEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcc--EEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHH
Confidence 211111 122233332222 3332 23331 1223456788999999999998777789999999999999999998
Q ss_pred HHH
Q 010539 490 YVL 492 (508)
Q Consensus 490 l~~ 492 (508)
++.
T Consensus 454 l~~ 456 (520)
T 1s3e_A 454 MGK 456 (520)
T ss_dssp TTS
T ss_pred Hhc
Confidence 865
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=2.9e-32 Score=270.04 Aligned_cols=380 Identities=14% Similarity=0.192 Sum_probs=244.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----------------------hhHHHHHHHcCCCCcccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----------------------PNIQNLFGELGINDRLQW 114 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----------------------~~~~~l~~~lg~~~~~~~ 114 (508)
+||+|||||++||+||++|+++|++|+|||++++++|.. ..+.++++++|+...+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 489999999999999999999999999999998875532 245678888887543322
Q ss_pred ccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHHHc
Q 010539 115 KEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQ 194 (508)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (508)
......+... +... .+.. .. ..+...+...+.......... ....+..++.+|+.+.
T Consensus 81 ~~~~~~~~~~---g~~~--~~~~----~~----------~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~l~~~ 137 (421)
T 3nrn_A 81 SNPKGKILWE---GKIF--HYRE----SW----------KFLSVKEKAKALKLLAEIRMN----KLPKEEIPADEWIKEK 137 (421)
T ss_dssp CSSSCEEEET---TEEE--EGGG----GG----------GGCC--------CCHHHHHTT----CCCCCCSBHHHHHHHH
T ss_pred CCCCeEEEEC---CEEE--EcCC----ch----------hhCCHhHHHHHHHHHHHHHhc----cCCCCCCCHHHHHHHh
Confidence 1111111111 1110 0000 00 001111111111111100000 0012347899999998
Q ss_pred CCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhhccCCeEEeecCCccccchHHHHHHHHHcCCEEEeCceee
Q 010539 195 GVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 274 (508)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~ 274 (508)
++.....+.++.++....+..++.+++.......+..... .+. ..++.+| +..+++.|.+.++++|++|+++++|+
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~ 213 (421)
T 3nrn_A 138 IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--WGG-PGLIRGG-CKAVIDELERIIMENKGKILTRKEVV 213 (421)
T ss_dssp TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTC-HHHHHHHHHHHHHTTTCEEESSCCEE
T ss_pred cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--cCC-cceecCC-HHHHHHHHHHHHHHCCCEEEcCCeEE
Confidence 7777777888888888888889999998776665554422 122 3456666 78999999999999999999999999
Q ss_pred EEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEeccccccccccccc
Q 010539 275 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLF 354 (508)
Q Consensus 275 ~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 354 (508)
+|.. +++.+ | +.+|+++.||.||+|+|++.+.+|++....+..+.+++.++.+.+..++++.++++.... .++++
T Consensus 214 ~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~ 288 (421)
T 3nrn_A 214 EINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG-NTIVF 288 (421)
T ss_dssp EEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC-SSEEE
T ss_pred EEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC-CeEEE
Confidence 9996 44444 5 446778999999999999999999975433445677888999889999999999875332 23333
Q ss_pred ccCccceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCC
Q 010539 355 SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR 434 (508)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
..+.-...+...+..++.++|+|..++.+...- ...+.++..+.++++|.+++| ..+ + ..+.+|..
T Consensus 289 ~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~----~~~~~~~~~~~~~~~L~~~~p-~~~-------~--~~~~~~~~ 354 (421)
T 3nrn_A 289 TPGLMINGFNEPSALDKSLAREGYTLIMAHMAL----KNGNVKKAIEKGWEELLEIFP-EGE-------P--LLAQVYRD 354 (421)
T ss_dssp CTTSSSCEEECGGGTCGGGSCTTEEEEEEEEEC----TTCCHHHHHHHHHHHHHHHCT-TCE-------E--EEEEEC--
T ss_pred cCCcceeeEeccCCCCCCcCCCCceEEEEEEee----ccccHHHHHHHHHHHHHHHcC-CCe-------E--EEeeeccC
Confidence 222212223345667788888888777654321 122334669999999999999 221 1 22334555
Q ss_pred ceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHH
Q 010539 435 SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 486 (508)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~i 486 (508)
+.+.+.+..... .. .++ +|||+|||++.+.+..+|+||+.||++||++|
T Consensus 355 ~~p~~~~~~~~~-~~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 355 GNPVNRTRAGLH-IE-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp -----------C-CC-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCcccccCCCC-CC-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 555553221111 22 567 99999999999863335699999999999998
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=283.21 Aligned_cols=398 Identities=18% Similarity=0.167 Sum_probs=260.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccccCCCCC-------------------------hhHHHHHHHcCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLVGAY-------------------------PNIQNLFGELGIN 109 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~~~~g~~-------------------------~~~~~l~~~lg~~ 109 (508)
++||+|||||++||+||++|+++|+ +|+|||++++++|.. ..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 3799999999999999999999999 999999998885532 1245888999987
Q ss_pred Cccccccc-----cceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccC
Q 010539 110 DRLQWKEH-----SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDG 184 (508)
Q Consensus 110 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (508)
..+..... ...+.+. .+.... ++..... +. ..............+..... .....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~--~g~~~~--~p~~~~~----~~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 143 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYV--GGALHA--LPTGLRG----LL---RPSPPFSKPLFWAGLRELTK-------PRGKEPD 143 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEE--TTEEEE--CCCSSCC----------CCTTSCSCSSHHHHTTTTS-------CCCCSSC
T ss_pred ceeeecCCCCchhcceEEEE--CCEEEE--CCCChhh----cc---cccchhhhHHHHHHHHhhhc-------CCCCCCC
Confidence 55432110 0011000 011100 0000000 00 00000000000111111110 0112346
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhh---------------------------cc
Q 010539 185 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE---------------------------KH 237 (508)
Q Consensus 185 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 237 (508)
+++.+|+.+. +...+.+.++.++...++..++++++....+..+...... ..
T Consensus 144 ~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 144 ETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp CBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred cCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 7999999985 6677788889999999999999999988765543321100 01
Q ss_pred CCeEEeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcch
Q 010539 238 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 317 (508)
Q Consensus 238 g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~ 317 (508)
+..+..+.+| +..+++.|.+.+++.|++|+++++|++|..++++ .+.|.+.++ ++.||+||+|+|++.+.+|+++..
T Consensus 223 ~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~~ 299 (477)
T 3nks_A 223 RWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLRDS-SLEADHVISAIPASVLSELLPAEA 299 (477)
T ss_dssp TCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECSSC-EEEESEEEECSCHHHHHHHSCGGG
T ss_pred CccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEECCe-EEEcCEEEECCCHHHHHHhccccC
Confidence 2234555665 7899999999999999999999999999975444 345777544 799999999999999999987653
Q ss_pred hccHHHHHHhhcCCcCEEEEEEEecccccc--cccccccc--cCccceeeccccccccccc-CCCccEEEEEecCc--hh
Q 010539 318 KEMAYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLFS--RSSLLSVYADMSLTCKEYY-NPNQSMLELVFAPA--EE 390 (508)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~ 390 (508)
. .....+.++.+.++.++++.|++++|+ .++.++.. +..+.++.++.+ .++.+. +++..++.+++++. ..
T Consensus 300 ~--~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg~~~~~ 376 (477)
T 3nks_A 300 A--PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGGSWLQT 376 (477)
T ss_dssp H--HHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECHHHHHH
T ss_pred H--HHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECCccccc
Confidence 2 566788889999999999999998874 23222222 233444444433 233332 44667776666542 22
Q ss_pred hc----CCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCC----CCCCCCceEEecc
Q 010539 391 WI----SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL----QRSPVEGFYLAGD 462 (508)
Q Consensus 391 ~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~aG~ 462 (508)
+. ..+++++.+.++++|.++++.... +..+.+.+|+.+++.|.+++...... +....++||+||+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-------~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~ 449 (477)
T 3nks_A 377 LEASGCVLSQELFQQRAQEAAATQLGLKEM-------PSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGA 449 (477)
T ss_dssp HHHSSCCCCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECST
T ss_pred cccccCCCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 21 468999999999999999986322 23566778888998888875321111 1112368999999
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHHHHH
Q 010539 463 YTKQKYLASMEGAVLSGKLCAQAIVQD 489 (508)
Q Consensus 463 ~~~~~~~~~~~gA~~sg~~aA~~il~~ 489 (508)
++.+ .+|++|+.||+++|++|+.+
T Consensus 450 ~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 450 SYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred CCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 9865 68999999999999999864
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=5.1e-34 Score=287.33 Aligned_cols=402 Identities=17% Similarity=0.227 Sum_probs=256.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC------CceEEEeccccCCCC---------------------ChhHHHHHHHcCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLVGA---------------------YPNIQNLFGELGI 108 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g------~~V~vlE~~~~~~g~---------------------~~~~~~l~~~lg~ 108 (508)
+++||+|||||++||+||++|+++| ++|+|||++++++|. ++.+.++++++|+
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 3579999999999999999999999 999999999887542 4567799999999
Q ss_pred CCccccccccceeecCCCCCCcccccCCC--CCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCcc
Q 010539 109 NDRLQWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 186 (508)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (508)
+..+........+... .+....+.... ..|.. +..++. .......+++....... . ......+..+
T Consensus 84 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~p~~---~~~~~~-~~~~~~~~~~~~~~~~~---~---~~~~~~~~~s 151 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLV--NRTLHPMPKGAVMGIPTK---IAPFVS-TGLFSLSGKARAAMDFI---L---PASKTKDDQS 151 (470)
T ss_dssp CTTEEECCCCCEEEEC--SSCEEECCC-------------------------CCSHHHHHHHH---S---CCCSSSSCCB
T ss_pred cceeecCCCCccEEEE--CCEEEECCCCcccCCcCc---hHHhhc-cCcCCHHHHHHHhcCcc---c---CCCCCCCCcC
Confidence 8655422111111111 11111111000 00100 111110 01111111111111110 0 0112245789
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHH-------hhh---------------ccCCeEEee
Q 010539 187 VQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE---------------KHGSKMAFL 244 (508)
Q Consensus 187 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------~~g~~~~~~ 244 (508)
+.+|+.+. +.....+.++.++...++..++++++.......+..+ ... ..+..+..+
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (470)
T 3i6d_A 152 LGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL 230 (470)
T ss_dssp HHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE
T ss_pred HHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe
Confidence 99999886 6777788889999999999999999876544322100 000 012234445
Q ss_pred cCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHH
Q 010539 245 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFK 324 (508)
Q Consensus 245 ~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~ 324 (508)
.+| +..+++.|.+.+.+ ++|+++++|++|+.++++ +.|++.+|+++.||+||+|+|++.+.+|+++.. ...
T Consensus 231 ~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~----~~~ 301 (470)
T 3i6d_A 231 STG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHKAAAGMLSELP----AIS 301 (470)
T ss_dssp TTC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHHHHHHHTTTST----THH
T ss_pred CCh-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHHHHHHHcCCch----hhH
Confidence 554 66777777665533 799999999999985544 358888998899999999999999999987642 247
Q ss_pred HHhhcCCcCEEEEEEEecccccccc-c--ccccccC-c--cceeecccccccccccCCCccEEEEEecC--chhhcCCCh
Q 010539 325 RLEKLVGVPVINIHIWFDRKLKNTY-D--HLLFSRS-S--LLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSD 396 (508)
Q Consensus 325 ~~~~~~~~~~~~v~~~~~~~~~~~~-~--~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 396 (508)
++..+.+.++.++++.|++++|+.. . +++.... . +.++.++ +..++...|++..++..++++ ...+...++
T Consensus 302 ~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 380 (470)
T 3i6d_A 302 HLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGDESIVDLSD 380 (470)
T ss_dssp HHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSCCGGGTSCH
T ss_pred HHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCCccccCCCH
Confidence 8888999999999999999987532 2 2222222 1 1122221 122344556666666665543 245678899
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCC----CCCCCCCCCCceEEecccccCCCCCcH
Q 010539 397 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASM 472 (508)
Q Consensus 397 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~~~~ 472 (508)
+++.+.++++|.+++|.... +......+|+.+.+.+.+++.. .++.+..+.+||||||+++.+ .++
T Consensus 381 ~~~~~~~~~~l~~~~g~~~~-------p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~gv 450 (470)
T 3i6d_A 381 NDIINIVLEDLKKVMNINGE-------PEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG---VGI 450 (470)
T ss_dssp HHHHHHHHHHHGGGSCCCSC-------CSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---CSH
T ss_pred HHHHHHHHHHHHHHhCCCCC-------ceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---CCH
Confidence 99999999999999986422 2345566777777777776421 122234567899999998875 579
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010539 473 EGAVLSGKLCAQAIVQDY 490 (508)
Q Consensus 473 ~gA~~sg~~aA~~il~~l 490 (508)
++|+.||+++|++|++.|
T Consensus 451 ~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 451 PDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999876
No 6
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.6e-33 Score=283.54 Aligned_cols=405 Identities=14% Similarity=0.112 Sum_probs=254.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC---------------------ChhHHHHHHHcCCCCcccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA---------------------YPNIQNLFGELGINDRLQW 114 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~---------------------~~~~~~l~~~lg~~~~~~~ 114 (508)
+++||+|||||++||+||+.|+++|++|+|||++++++|. ++++.++++++|+...+..
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 3489999999999999999999999999999999988654 3567788888888544332
Q ss_pred cc----ccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHH----Hhhcchh--hHhcCcchhhcccC
Q 010539 115 KE----HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK----FAIGLLP--AIIGGQAYVEAQDG 184 (508)
Q Consensus 115 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~ 184 (508)
.. ....+......+.... + + .......+... +..... ....... ............+.
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~--~----~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTY--M----T--HEAEDELLRSA----LHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDE 185 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEE--E----C--HHHHHHHHHHH----HHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHT
T ss_pred ccccCCCceEEEecCCCCceee--c----C--HHHHHHHHHHH----HHHHHccchhhhhhcCCCCCCcccCcchhhhhh
Confidence 21 1111111110011100 0 0 00000000000 000000 0000000 00000011223457
Q ss_pred ccHHHHHHHcC--CChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhh----ccCCeEEeecCCccccchHHHHH
Q 010539 185 LTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPIVE 258 (508)
Q Consensus 185 ~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~g~~~~~l~~~l~~ 258 (508)
.++.+|+++.+ .... ...++..+....+..++++++....+..+...... ..+.....+.+| ...+++.|.+
T Consensus 186 ~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~ 263 (495)
T 2vvm_A 186 MSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRFWE 263 (495)
T ss_dssp SBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHHHH
T ss_pred hhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHHHH
Confidence 79999999876 5544 45678888888888899999887765443221000 001123344554 6789999999
Q ss_pred HHHHcC-CEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEE
Q 010539 259 HIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 337 (508)
Q Consensus 259 ~l~~~g-~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v 337 (508)
.+.+.| ++|+++++|++|+.++++ + .|++.+|+++.||+||+|+|+..+..|+..+..+....+++..+.+.++.+|
T Consensus 264 ~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv 341 (495)
T 2vvm_A 264 EAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKV 341 (495)
T ss_dssp HHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEE
T ss_pred HhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEE
Confidence 999988 999999999999975444 3 4888888789999999999999999886443344456788888999999999
Q ss_pred EEEecccccccccccccccCccceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHHHHhCCCCccc
Q 010539 338 HIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISA 417 (508)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 417 (508)
++.|++++|..+.++...+.++..++. ....+++..++..+...... +.+++..+.++++|.+++|+...
T Consensus 342 ~l~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~vl~~~~~~~~~---~~~~e~~~~~~~~L~~~~~~~~~- 411 (495)
T 2vvm_A 342 HAEVDNKDMRSWTGIAYPFNKLCYAIG------DGTTPAGNTHLVCFGNSANH---IQPDEDVRETLKAVGQLAPGTFG- 411 (495)
T ss_dssp EEEESCGGGGGEEEEECSSCSSCEEEE------EEECTTSCEEEEEEECSTTC---CCTTTCHHHHHHHHHTTSTTSCC-
T ss_pred EEEECCccCCCceeEecCCCCcEEEec------CCCCCCCCeEEEEEeCcccc---CCCHHHHHHHHHHHHHhcCCCCC-
Confidence 999999887655444333333322221 11233444555443332222 34556678899999999875222
Q ss_pred ccccceEEEeeEeecC---C--ceec-cCCCCC-CCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 010539 418 DQSKAKIVKYHVVKTP---R--SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 490 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~---~--~~~~-~~~~~~-~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l 490 (508)
+......+|. . +.|. +.++.. ...+.++.|.++|||||++++..|+++|+||+.||++||++|++.+
T Consensus 412 ------~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l 485 (495)
T 2vvm_A 412 ------VKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEEL 485 (495)
T ss_dssp ------EEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ------ceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHh
Confidence 3344444553 2 2332 223321 1233446688999999999997777999999999999999999988
Q ss_pred HH
Q 010539 491 VL 492 (508)
Q Consensus 491 ~~ 492 (508)
+.
T Consensus 486 ~~ 487 (495)
T 2vvm_A 486 GT 487 (495)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=4.9e-33 Score=278.48 Aligned_cols=406 Identities=16% Similarity=0.161 Sum_probs=250.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC---------------------hhHHHHHHHcCCCCcccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY---------------------PNIQNLFGELGINDRLQW 114 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~---------------------~~~~~l~~~lg~~~~~~~ 114 (508)
.++||+|||||++||+||++|++.|++|+|||++++++|.. ..+.++++++|+.....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 35799999999999999999999999999999998886542 345678888988754433
Q ss_pred ccccceeecCCCCCCcccccCCCCCC-CchhHHHHHHhcCCCCChHHHHHHhhcchh-hHhcCcchhhcccCccHHHHHH
Q 010539 115 KEHSMIFAMPNKPGEFSRFDFPEVLP-APLNGILAILRNNEMLTWPEKVKFAIGLLP-AIIGGQAYVEAQDGLTVQEWMR 192 (508)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 192 (508)
.....++... .+. .+.+....+ ........+.. ....+..+..... ............+..++.+|++
T Consensus 84 ~~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 153 (453)
T 2yg5_A 84 REGESVYISS--AGE--RTRYTGDSFPTNETTKKEMDR------LIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLI 153 (453)
T ss_dssp CCSEEEEECT--TSC--EEEECSSSCSCCHHHHHHHHH------HHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHH
T ss_pred cCCCEEEEeC--CCc--eeeccCCCCCCChhhHHHHHH------HHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHH
Confidence 3322222221 011 111211111 00001111100 0001110000000 0000001112345789999999
Q ss_pred HcCCChhhHHHHHHHHHhhcccCCCC-cchHHHHHHHHHHH------hhhccCCeEEeecCCccccchHHHHHHHHHcCC
Q 010539 193 KQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGG 265 (508)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~ 265 (508)
+.+... ....++..+....+..+++ +++..+.+..+... +. ..+....++.|| ...+++.|++.+ |+
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG-~~~l~~~l~~~l---g~ 227 (453)
T 2yg5_A 154 NQSDDA-EARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGG-MQQVSIRMAEAL---GD 227 (453)
T ss_dssp HHCSCH-HHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTC-THHHHHHHHHHH---GG
T ss_pred hhcCCH-HHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCC-hHHHHHHHHHhc---CC
Confidence 986554 4455777777777778888 88887765433221 00 011223455555 677777777655 78
Q ss_pred EEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEecccc
Q 010539 266 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKL 345 (508)
Q Consensus 266 ~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 345 (508)
+|+++++|++|..++ +..+.|++ +|+++.||+||+|+|+..+..|+..+..+....++++++.+.++.++++.|++++
T Consensus 228 ~i~~~~~V~~i~~~~-~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 228 DVFLNAPVRTVKWNE-SGATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp GEECSCCEEEEEEET-TEEEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred cEEcCCceEEEEEeC-CceEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 999999999999744 33134666 6778999999999999999888754444445667788888889999999999998
Q ss_pred cccc--cccccccCccceeecccccccccccCCC-ccEEEEEecC--chhhcCCChHHHHHHHHHHHHHhCCCCcccccc
Q 010539 346 KNTY--DHLLFSRSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQS 420 (508)
Q Consensus 346 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 420 (508)
|+.. .+.++.........++.+ .+++ ..++..++.+ .+.|.+.+++++.+.++++|.+++|.... .
T Consensus 306 w~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~-~-- 376 (453)
T 2yg5_A 306 WREDGLSGTGFGASEVVQEVYDNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAE-E-- 376 (453)
T ss_dssp GGGGTEEEEEECTTSSSCEEEECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGG-C--
T ss_pred CCCCCCCceeecCCCCeEEEEeCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCC-C--
Confidence 8543 222222222222222221 2333 2344443332 35677888999999999999999985321 1
Q ss_pred cceEEEeeEeecCC-----ceec--cCCC-CCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 010539 421 KAKIVKYHVVKTPR-----SVYK--TIPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 491 (508)
Q Consensus 421 ~~~~~~~~~~~~~~-----~~~~--~~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~ 491 (508)
+..+...+|.. +.|. +.++ .....+.+++|++||||||++++..|+++|+||+.||++||++|++.++
T Consensus 377 ---p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 377 ---PVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp ---CSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred ---ccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 12233344432 2221 2333 1122345678899999999999877778999999999999999998763
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.1e-32 Score=277.92 Aligned_cols=399 Identities=17% Similarity=0.220 Sum_probs=257.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC---------------------ChhHHHHHHHcCCCCccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA---------------------YPNIQNLFGELGINDRLQ 113 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~---------------------~~~~~~l~~~lg~~~~~~ 113 (508)
...+||+|||||++||+||+.|+++|++|+|||++++++|. ++.+.++++++|+...+.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~~ 93 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIR 93 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcceee
Confidence 45689999999999999999999999999999999988654 356788999999865433
Q ss_pred ccc--ccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHH
Q 010539 114 WKE--HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 191 (508)
Q Consensus 114 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (508)
... ....+... .+.. +.+ +.. ...++. .....+.+..+.+....... ....+..++.+|+
T Consensus 94 ~~~~~~~~~~~~~--~g~~--~~~----p~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~~l 155 (478)
T 2ivd_A 94 AADPAAKRRYVYT--RGRL--RSV----PAS---PPAFLA-SDILPLGARLRVAGELFSRR------APEGVDESLAAFG 155 (478)
T ss_dssp CSCSSCCCEEEEE--TTEE--EEC----CCS---HHHHHT-CSSSCHHHHHHHHGGGGCCC------CCTTCCCBHHHHH
T ss_pred ecCccccceEEEE--CCEE--EEC----CCC---HHHhcc-CCCCCHHHHHHHhhhhhcCC------CCCCCCCCHHHHH
Confidence 221 10111110 1111 111 111 122222 13334444444433221110 0124568999999
Q ss_pred HHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhh----------------------hccC----CeEEeec
Q 010539 192 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EKHG----SKMAFLD 245 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g----~~~~~~~ 245 (508)
++. +...+.+.++.++....+..++++++..+.+..+..+.. ...+ ..+.++.
T Consensus 156 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
T 2ivd_A 156 RRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFD 234 (478)
T ss_dssp HHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEET
T ss_pred HHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEEC
Confidence 986 677788888888988899899999988765443322110 0112 4455666
Q ss_pred CCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE---cCCcEEEccEEEEccChHHHhhhcCcchhccHH
Q 010539 246 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAY 322 (508)
Q Consensus 246 g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~ 322 (508)
+| ...+++.|.+.+ |++|+++++|++|..++++ +.|++ .+|+++.||+||+|+|++.+..|+++. +...
T Consensus 235 gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~ 306 (478)
T 2ivd_A 235 GG-LQVLIDALAASL---GDAAHVGARVEGLAREDGG--WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDAL 306 (478)
T ss_dssp TC-THHHHHHHHHHH---GGGEESSEEEEEEECC--C--CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHH
T ss_pred CC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe--EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHH
Confidence 65 678888888776 6799999999999975444 34776 567789999999999999999988653 3355
Q ss_pred HHHHhhcCCcCEEEEEEEecccccccccc--cccc---cCccceeecccccccccccCCCccEEEEEecC--chhhcCCC
Q 010539 323 FKRLEKLVGVPVINIHIWFDRKLKNTYDH--LLFS---RSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCS 395 (508)
Q Consensus 323 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 395 (508)
.+++.++.+.++.++++.+++++|+.... .+.. +.++..++++. ...+...|++..++.+++.+ ...+...+
T Consensus 307 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~ 385 (478)
T 2ivd_A 307 AALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHAS-TTFPFRAEGGRVLYSCMVGGARQPGLVEQD 385 (478)
T ss_dssp HHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHH-HHCGGGBSTTCEEEEEEEECTTCGGGGGSC
T ss_pred HHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEc-ccCCCcCCCCCEEEEEEeCCcCCccccCCC
Confidence 67888899999999999999887653111 1221 12233333222 12334456666666655543 24566788
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCC----CCCCCCCCCceEEecccccCCCCCc
Q 010539 396 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDYTKQKYLAS 471 (508)
Q Consensus 396 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~aG~~~~~~~~~~ 471 (508)
++++.+.++++|.+++|.... +......+|+.+.+.+.++.... ++.+.. ++||||||+++.+ .+
T Consensus 386 ~~~~~~~~~~~l~~~~~~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~g---~g 454 (478)
T 2ivd_A 386 EDALAALAREELKALAGVTAR-------PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYKG---VG 454 (478)
T ss_dssp HHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTSC---CS
T ss_pred HHHHHHHHHHHHHHHhCCCCC-------CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCCC---CC
Confidence 999999999999999987422 12234567777765565553110 111122 6899999999843 58
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 010539 472 MEGAVLSGKLCAQAIVQDYVL 492 (508)
Q Consensus 472 ~~gA~~sg~~aA~~il~~l~~ 492 (508)
|+||+.||+++|++|+..++.
T Consensus 455 v~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 455 LNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999987754
No 9
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=3.5e-33 Score=281.21 Aligned_cols=404 Identities=18% Similarity=0.218 Sum_probs=259.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC--CceEEEeccccCCCC---------------------ChhHHHHHHHcCCCCcc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLVGA---------------------YPNIQNLFGELGINDRL 112 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g--~~V~vlE~~~~~~g~---------------------~~~~~~l~~~lg~~~~~ 112 (508)
.++||+|||||++||+||++|+++| ++|+|||++++++|. +..+.++++++|++...
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 3589999999999999999999999 999999999887552 35677999999987654
Q ss_pred ccccccceeecCCCCCCcccccCCC--CCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHH
Q 010539 113 QWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 190 (508)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (508)
........+... .+.+..+.... ..|.. +..++ ........+++ ....... ..........+..++.+|
T Consensus 83 ~~~~~~~~~~~~--~g~~~~~p~~~~~~~p~~---~~~~~-~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 83 VRNNTSQAFILD--TGGLHPIPKGAVMGIPTD---LDLFR-QTTLLTEEEKQ-EVADLLL--HPSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp EECCCCCEEEEE--TTEEEECCSSEETTEESC---HHHHT-TCSSSCHHHHH-HHHHHHH--SCCTTCCCCSSCCBHHHH
T ss_pred eecCCCceEEEE--CCEEEECCCcccccCcCc---hHHHh-hccCCChhHHH-HhhCccc--CCcccccCCCCCcCHHHH
Confidence 422111111111 11111111000 01111 12222 22344444443 2211111 011101113457899999
Q ss_pred HHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHH----------hh-hc--------------cCCeEEeec
Q 010539 191 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF----------LQ-EK--------------HGSKMAFLD 245 (508)
Q Consensus 191 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~--------------~g~~~~~~~ 245 (508)
+.+. +...+.+.++.++....+..++++++....+..+..+ +. .. .+..+..+.
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9985 6677888889999999999999888765333222111 00 00 133455566
Q ss_pred CCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHH
Q 010539 246 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 325 (508)
Q Consensus 246 g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~ 325 (508)
+| +..+++.|.+.+.+ ++|+++++|++|+.++++ +.|++.+| ++.||+||+|+|++.+.+|+++... ..
T Consensus 233 ~G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~-----~~ 301 (475)
T 3lov_A 233 TG-LESLIERLEEVLER--SEIRLETPLLAISREDGR--YRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHL-----PE 301 (475)
T ss_dssp TC-HHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE--EEEECTTC-CEEESEEEECSCHHHHHHHCTTSCC-----HH
T ss_pred Ch-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE--EEEEECCC-eEECCEEEECCCHHHHHHHcCccCH-----HH
Confidence 55 66777777766643 799999999999975443 35888888 7999999999999999999876522 67
Q ss_pred HhhcCCcCEEEEEEEecccccccccc--cccccC-c--cceeecccccccccccCCCccEEEEEecC--chhhcCCChHH
Q 010539 326 LEKLVGVPVINIHIWFDRKLKNTYDH--LLFSRS-S--LLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSE 398 (508)
Q Consensus 326 ~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 398 (508)
+..+.+.++.++++.|+++++...++ ++.... . +.++.++ +..++...|+ ..++..++++ ...+...++++
T Consensus 302 ~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~ 379 (475)
T 3lov_A 302 LEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEV 379 (475)
T ss_dssp HHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHH
T ss_pred HhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHH
Confidence 78889999999999999987333222 222222 1 1122221 2223344444 5555555433 35567789999
Q ss_pred HHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCC----CCCCCCCCCCceEEecccccCCCCCcHHH
Q 010539 399 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASMEG 474 (508)
Q Consensus 399 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~~~~~g 474 (508)
+++.++++|.+++|.... +....+.+|+.+.+.|.+++.. .++.+.++.+||||||+++.+ .+|++
T Consensus 380 ~~~~~~~~L~~~~g~~~~-------p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~~ 449 (475)
T 3lov_A 380 LQQAVLQDLEKICGRTLE-------PKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLPD 449 (475)
T ss_dssp HHHHHHHHHHHHHSSCCC-------CSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHHH
T ss_pred HHHHHHHHHHHHhCCCCC-------CeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHHH
Confidence 999999999999986422 2345566777777777777421 122234567899999998875 68999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010539 475 AVLSGKLCAQAIVQDYVL 492 (508)
Q Consensus 475 A~~sg~~aA~~il~~l~~ 492 (508)
|+.||+++|++|+..++.
T Consensus 450 a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 450 CVASAKTMIESIELEQSH 467 (475)
T ss_dssp HHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999998865
No 10
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.6e-31 Score=271.06 Aligned_cols=244 Identities=19% Similarity=0.233 Sum_probs=135.6
Q ss_pred EEeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH-HHhhhcCcchhc
Q 010539 241 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKE 319 (508)
Q Consensus 241 ~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~-~~~~ll~~~~~~ 319 (508)
..++.|| +..+++.|++.+++.|++|+++++|++|.. +++++++|++.+|+++.||.||+++++. ++..|+++...+
T Consensus 213 ~~~p~GG-~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~ 290 (501)
T 4dgk_A 213 VWFPRGG-TGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA 290 (501)
T ss_dssp EEEETTH-HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC---------------
T ss_pred eEEeCCC-CcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc
Confidence 4567776 889999999999999999999999999998 5677889999999999999999988765 556788776555
Q ss_pred cHHHHHHhhcCCc-CEEEEEEEeccccccccc-ccccccC------------cc---ceee-cccccccccccCCCccEE
Q 010539 320 MAYFKRLEKLVGV-PVINIHIWFDRKLKNTYD-HLLFSRS------------SL---LSVY-ADMSLTCKEYYNPNQSML 381 (508)
Q Consensus 320 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~~~~~~~------------~~---~~~~-~~~~~~~~~~~~~~~~~~ 381 (508)
....+.+....+. +..++++.++.+...... .+++... .+ ..++ ...+..++..+|+|...+
T Consensus 291 ~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~ 370 (501)
T 4dgk_A 291 VKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSY 370 (501)
T ss_dssp ------------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEE
T ss_pred hhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceE
Confidence 5555666666554 577888888876532111 1111110 00 1111 233456788889988766
Q ss_pred EEE-ecCchhhcCC----ChHHHHHHHHHHHHHhC-CCCcccccccceEEEeeEeecCCc-----------eeccCCC--
Q 010539 382 ELV-FAPAEEWISC----SDSEIIDATMKELAKLF-PDEISADQSKAKIVKYHVVKTPRS-----------VYKTIPN-- 442 (508)
Q Consensus 382 ~~~-~~~~~~~~~~----~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-- 442 (508)
.++ ..+...+... ..+++.+++++.|.+.+ |+..+ .+.. ....+|.. .|+..+.
T Consensus 371 ~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~~------~i~~-~~~~tP~~~~~~~~~~~G~~~g~~~~~~ 443 (501)
T 4dgk_A 371 YVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRS------QLVT-HRMFTPFDFRDQLNAYHGSAFSVEPVLT 443 (501)
T ss_dssp EEEEEECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHHH------HEEE-EEEECTTTTC------------------
T ss_pred EEEEecCccccccccHHHHHHHHHHHHHHHHHHhhCCChHH------ceEE-EEECCHHHHHHHcCCCCccccChhcchh
Confidence 543 3333222222 24678899999998854 65322 1222 22233331 2222221
Q ss_pred -CCCCCCCC-CCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 010539 443 -CEPCRPLQ-RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 495 (508)
Q Consensus 443 -~~~~~~~~-~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~~~ 495 (508)
...++|.. .+|++||||||++++++ +|++||+.||++||++|+++|...++
T Consensus 444 q~~~~RP~~~~t~i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 444 QSAWFRPHNRDKTITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp ------------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred hccccCCCCCCCCCCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 22245544 47899999999999987 79999999999999999999966543
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=3.7e-33 Score=283.17 Aligned_cols=406 Identities=17% Similarity=0.168 Sum_probs=254.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC---------------------ChhHHHHHHHcCCCCcccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA---------------------YPNIQNLFGELGINDRLQW 114 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~---------------------~~~~~~l~~~lg~~~~~~~ 114 (508)
+.+||+|||||++||+||+.|+++|++|+|||++++++|. ++.+.++++++|+.....+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~~ 91 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQF 91 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccccee
Confidence 4689999999999999999999999999999999998663 3567889999998654333
Q ss_pred cccc-ceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHHH
Q 010539 115 KEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 193 (508)
Q Consensus 115 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (508)
.... ..+... .+.. +. .+.. ...++. .......++++.+.......... ......+..++.+|+++
T Consensus 92 ~~~~~~~~~~~--~g~~--~~----~p~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~l~~ 158 (504)
T 1sez_A 92 PLSQNKRYIAR--NGTP--VL----LPSN---PIDLIK-SNFLSTGSKLQMLLEPILWKNKK-LSQVSDSHESVSGFFQR 158 (504)
T ss_dssp CSSCCCEEEES--SSSE--EE----CCSS---HHHHHH-SSSSCHHHHHHHHTHHHHC-----------CCCBHHHHHHH
T ss_pred ccCCCceEEEE--CCeE--EE----CCCC---HHHHhc-cccCCHHHHHHHhHhhhccCccc-ccccCCCCccHHHHHHH
Confidence 2111 111111 1111 01 1111 111221 13334444444332211100000 00011345899999988
Q ss_pred cCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHH-----------hhhc-------------------cCCeEEe
Q 010539 194 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-----------LQEK-------------------HGSKMAF 243 (508)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-------------------~g~~~~~ 243 (508)
. +...+.+.++.++...++..++++++....+..+... +... ......+
T Consensus 159 ~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (504)
T 1sez_A 159 H-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFS 237 (504)
T ss_dssp H-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBE
T ss_pred H-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEe
Confidence 7 6777888888899888898999999876543322111 1000 0112344
Q ss_pred ecCCccccchHHHHHHHHHcC-CEEEeCceeeEEEEcCCCc----EEEEEEc--CC---cEEEccEEEEccChHHHhhhc
Q 010539 244 LDGNPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQL 313 (508)
Q Consensus 244 ~~g~~~~~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g~----~~~V~~~--~g---~~i~ad~VI~A~~~~~~~~ll 313 (508)
+.|| ...|++.|++.+ + ++|+++++|++|..++++. .+.|++. +| +++.||+||+|+|+..+.+++
T Consensus 238 ~~GG-~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 238 FLGG-MQTLTDAICKDL---REDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMK 313 (504)
T ss_dssp ETTC-THHHHHHHHTTS---CTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSE
T ss_pred eCcH-HHHHHHHHHhhc---ccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHh
Confidence 5555 567766666543 4 7899999999999865552 1345553 45 578999999999999999987
Q ss_pred Cc---chhccHHHHHHhhcCCcCEEEEEEEeccccccc-cc--ccccc-cC-----ccceeecccccccccccCCCccEE
Q 010539 314 PE---NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YD--HLLFS-RS-----SLLSVYADMSLTCKEYYNPNQSML 381 (508)
Q Consensus 314 ~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~--~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 381 (508)
.. ...+. ..+..+.+.++.++++.|++++|+. .. ++++. .. .+.+..+. +..++...|++..++
T Consensus 314 ~~~~~~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~~~~~~~p~g~~~l 389 (504)
T 1sez_A 314 IAKRGNPFLL---NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SMMFPDRAPNNVYLY 389 (504)
T ss_dssp EESSSSBCCC---TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HHHCGGGSCTTEEEE
T ss_pred hcccCCcccH---HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-ccccCCcCCCCCEEE
Confidence 31 11111 1155677778999999999988652 11 12221 11 22232221 234555566676666
Q ss_pred EEEecC--chhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCC---CCCCCCCCc
Q 010539 382 ELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQRSPVEG 456 (508)
Q Consensus 382 ~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 456 (508)
..+..+ ...|...+++++++.++++|.+++|....+ ......+|+.+.+.|.+++.... ....++++|
T Consensus 390 ~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p-------~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~ 462 (504)
T 1sez_A 390 TTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEP-------TYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPG 462 (504)
T ss_dssp EEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCC-------SSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTT
T ss_pred EEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCC-------eEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCC
Confidence 555443 256778899999999999999999864222 22344566666666766642211 112346789
Q ss_pred eEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 010539 457 FYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 493 (508)
Q Consensus 457 l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~ 493 (508)
|||||+++++ .+++||+.||++||++|++.++..
T Consensus 463 l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 463 LFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp EEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999874 699999999999999999988654
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.97 E-value=8.1e-31 Score=266.87 Aligned_cols=400 Identities=14% Similarity=0.163 Sum_probs=248.5
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHc-CCceEEEeccccCCCC----------------------ChhHHHHHHHcCCCC
Q 010539 54 PSKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLVGA----------------------YPNIQNLFGELGIND 110 (508)
Q Consensus 54 ~~~~~dVvIIGaG~aGlsaA~~L~~~-g~~V~vlE~~~~~~g~----------------------~~~~~~l~~~lg~~~ 110 (508)
++.++||||||||++||+||++|+++ |++|+|||+++++||. ++.+.+++++++...
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKE 86 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCcc
Confidence 34568999999999999999999985 9999999999999764 234567777766533
Q ss_pred cccc-ccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHH
Q 010539 111 RLQW-KEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQE 189 (508)
Q Consensus 111 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (508)
.... ......... .+.+..+.+... + .................... .......+..++.+
T Consensus 87 ~~~~~~~~~~~i~~---~g~~~~~p~~~~----~----------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~ 147 (513)
T 4gde_A 87 DDWYTHQRISYVRC---QGQWVPYPFQNN----I----------SMLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDE 147 (513)
T ss_dssp GGEEEEECCEEEEE---TTEEEESSGGGG----G----------GGSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHH
T ss_pred ceeEEecCceEEEE---CCeEeecchhhh----h----------hhcchhhHHHHHHHHHHHHH--hhhcccccccCHHH
Confidence 2111 111111110 111111110000 0 00111111111111111000 00111234568999
Q ss_pred HHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHH---------HHHHhhh------ccCCeEEeecCCccccchH
Q 010539 190 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIA---------LNRFLQE------KHGSKMAFLDGNPPERLCL 254 (508)
Q Consensus 190 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~------~~g~~~~~~~g~~~~~l~~ 254 (508)
|+.+. +...+.+.++.++...++..++++++..+.... ....+.. .......++..+++..+++
T Consensus 148 ~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~ 226 (513)
T 4gde_A 148 WIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWI 226 (513)
T ss_dssp HHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHH
T ss_pred HHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHH
Confidence 98876 566777888899999999888888776543211 1111111 1112233443344889999
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCE
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 334 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 334 (508)
.|++.+++.|++|+++++|++|.. +++ . |++.+|+++.||+||+|+|+..+..++++. ....+...+.|.++
T Consensus 227 ~l~~~l~~~g~~i~~~~~V~~I~~-~~~-~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~ 298 (513)
T 4gde_A 227 AVANTLPKEKTRFGEKGKVTKVNA-NNK-T--VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSST 298 (513)
T ss_dssp HHHHTSCGGGEEESGGGCEEEEET-TTT-E--EEETTSCEEEEEEEEECSCHHHHHHHTTCH----HHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCeeeecceEEEEEEc-cCC-E--EEEcCCCEEECCEEEECCCHHHHHHhcCch----hhHhhhhcccCCce
Confidence 999999999999999999999986 333 2 678899999999999999999999998754 33466678888899
Q ss_pred EEEEEEecccccccc---ccccccc-CccceeecccccccccccCCCc---------------------cEEEEEecC--
Q 010539 335 INIHIWFDRKLKNTY---DHLLFSR-SSLLSVYADMSLTCKEYYNPNQ---------------------SMLELVFAP-- 387 (508)
Q Consensus 335 ~~v~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~-- 387 (508)
..|.+.++....... .++++.+ ..........++..+...|++. ..+...+..
T Consensus 299 ~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (513)
T 4gde_A 299 HVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVS 378 (513)
T ss_dssp EEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEE
T ss_pred EEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEeccc
Confidence 999998886543221 1111211 1111122122222233333322 222222111
Q ss_pred chhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCC----CCCCCCCCCceEEeccc
Q 010539 388 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDY 463 (508)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~aG~~ 463 (508)
..+...++++++++.++++|.++.+....+ .+...++.+||.+.+.|..++... ++.+.. +|||++|..
T Consensus 379 ~~~~~~~~de~l~~~~~~~L~~~~~i~~~~-----~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~ 451 (513)
T 4gde_A 379 ESSMKPVNQETILADCIQGLVNTEMLKPTD-----EIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD--KDIWSRGRF 451 (513)
T ss_dssp EBTTBCCCTTTHHHHHHHHHHHTTSSCTTC-----EEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--TTEEECSTT
T ss_pred chhccCCCHHHHHHHHHHHHHHhcCCCCcc-----ceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh--cCcEEecCC
Confidence 244557889999999999999998754322 367778889999999888774322 222222 599999988
Q ss_pred ccCCCC-CcHHHHHHHHHHHHHHHHH
Q 010539 464 TKQKYL-ASMEGAVLSGKLCAQAIVQ 488 (508)
Q Consensus 464 ~~~~~~-~~~~gA~~sg~~aA~~il~ 488 (508)
....|+ +.|++|+.+|+.||++|+.
T Consensus 452 g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 452 GSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp TTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred cccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 877764 5799999999999999986
No 13
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.97 E-value=1.8e-28 Score=243.69 Aligned_cols=390 Identities=16% Similarity=0.181 Sum_probs=223.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-------------------------hhHHHHHHHcCCCCc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-------------------------PNIQNLFGELGINDR 111 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-------------------------~~~~~l~~~lg~~~~ 111 (508)
++||||||||++||+||+.|+++|++|+|||++++++|.+ ..+.++++++|++..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 80 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTA 80 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeee
Confidence 3799999999999999999999999999999988775532 234466677777543
Q ss_pred cccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHH
Q 010539 112 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 191 (508)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (508)
.........+.. ..+.+... +.. .......+...+ ........................+ .++.+++
T Consensus 81 ~~~~~~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l 147 (431)
T 3k7m_X 81 AASEFTSFRHRL--GPTAVDQA-FPI-PGSEAVAVEAAT--------YTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYV 147 (431)
T ss_dssp ECCCCCEECCBS--CTTCCSSS-SCC-CGGGHHHHHHHH--------HHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHH
T ss_pred ecCCCCcEEEEe--cCCeecCC-CCC-CHHHHHHHHHHH--------HHHHHHHHhcCCCCCccCcchhhhc-CCHHHHH
Confidence 221111111100 00111000 000 000011110000 0000111000000000111122344 7899999
Q ss_pred HHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHH---hhh-ccCCeEEeecCCccccchHHHHHHHH-HcCCE
Q 010539 192 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF---LQE-KHGSKMAFLDGNPPERLCLPIVEHIQ-SLGGE 266 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~g~~~~~~~g~~~~~l~~~l~~~l~-~~g~~ 266 (508)
...+..... ..++..+....+..+.++++.......+... +.. ...... .+.++ ...+.+.+. +.| +
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-----~~~l~~~~~~~~g-~ 219 (431)
T 3k7m_X 148 DKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-----SADLVDAMSQEIP-E 219 (431)
T ss_dssp HHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-----THHHHHHHHTTCS-C
T ss_pred HhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-----HHHHHHHHHhhCC-c
Confidence 987665443 3455666666777888888877665433221 000 011111 22222 233444443 446 9
Q ss_pred EEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEeccccc
Q 010539 267 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 346 (508)
Q Consensus 267 i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 346 (508)
|+++++|++|+.++++ + .|++.+|+++.||+||+|+|+..+..+...+..+....+++..+.+....+|.+.|+.+++
T Consensus 220 i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 220 IRLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp EESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred eEeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 9999999999975444 3 4888888779999999999999998875333344455677888888889999999998874
Q ss_pred ccccccccccCccceeecccccccccccC-CCccEEEEEecCchhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEE
Q 010539 347 NTYDHLLFSRSSLLSVYADMSLTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425 (508)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 425 (508)
. ++...+......++. ... ++..++..+..+.. +...+ + +.+.+.|.+++|+.. + ....
T Consensus 298 ~----i~~~~d~~~~~~~~~------~~~~~~~~~l~~~~~g~~-~~~~~-~---~~~~~~l~~~~~~~~-~----~~~~ 357 (431)
T 3k7m_X 298 G----IECVGDGIFPTLYDY------CEVSESERLLVAFTDSGS-FDPTD-I---GAVKDAVLYYLPEVE-V----LGID 357 (431)
T ss_dssp T----EEEEBSSSSSEEEEE------EECSSSEEEEEEEEETTT-CCTTC-H---HHHHHHHHHHCTTCE-E----EEEE
T ss_pred C----ceEcCCCCEEEEEeC------cCCCCCCeEEEEEecccc-CCCCC-H---HHHHHHHHHhcCCCC-c----cEeE
Confidence 3 222232222221111 111 23333332322222 33222 2 346677888887531 1 1122
Q ss_pred EeeEeecCC--ceecc-CCC-CCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHH
Q 010539 426 KYHVVKTPR--SVYKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 489 (508)
Q Consensus 426 ~~~~~~~~~--~~~~~-~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~ 489 (508)
.+.|...|. |.|.+ .|+ .....+.++.|.++|||||++++..|+++|+||+.||++||++|+..
T Consensus 358 ~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 358 YHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp CCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred ecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 233333343 44444 334 34556777889999999999999888999999999999999999863
No 14
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.97 E-value=3.6e-30 Score=260.07 Aligned_cols=241 Identities=14% Similarity=0.143 Sum_probs=158.9
Q ss_pred CeEEeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC---cEEEccEEEEccChHHHhhhcCc
Q 010539 239 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQLPE 315 (508)
Q Consensus 239 ~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g---~~i~ad~VI~A~~~~~~~~ll~~ 315 (508)
..+..+.|| ...|++.|.+.+.+ ++|+++++|++|..++++ + .|++.+| +++.||+||+|+|+..+..|..+
T Consensus 229 ~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~ 303 (489)
T 2jae_A 229 MMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-V-TVEYTAGGSKKSITADYAICTIPPHLVGRLQNN 303 (489)
T ss_dssp SSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCHHHHTTSEEC
T ss_pred ccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-E-EEEEecCCeEEEEECCEEEECCCHHHHHhCccC
Confidence 345566666 78888888887743 689999999999985443 3 3777665 57999999999999999888652
Q ss_pred chhccHHHHHHhhcCCcCEEEEEEEecccccccc-c---ccccccCccceeecccccccccccCCCccEEEEEecC--ch
Q 010539 316 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-D---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AE 389 (508)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 389 (508)
.+....+++.++.+.++.++++.|++++|+.. + .+...+.++..++.... ..+ .+...++..++.+ ..
T Consensus 304 --l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~-~~~---~~~~~l~~~~~~g~~~~ 377 (489)
T 2jae_A 304 --LPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYD-HYN---SDRGVVVAYYSSGKRQE 377 (489)
T ss_dssp --CCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSS-STT---SSCEEEEEEEEETHHHH
T ss_pred --CCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCC-CCC---CCCCEEEEEeeCCchhh
Confidence 23355678889999999999999999987543 1 12233444444433221 111 1223444333333 35
Q ss_pred hhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCc--eecc-C------CC-CCCCCCCCCCCCCceEE
Q 010539 390 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-I------PN-CEPCRPLQRSPVEGFYL 459 (508)
Q Consensus 390 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------~~-~~~~~~~~~~~~~~l~~ 459 (508)
.|...+++++.+.++++|.+++|......+ .......|...+.. .+.+ . ++ .....+.+++|.+||||
T Consensus 378 ~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f 455 (489)
T 2jae_A 378 AFESLTHRQRLAKAIAEGSEIHGEKYTRDI--SSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYF 455 (489)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHCGGGGSSE--EEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHHcCcchhhhc--cccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEE
Confidence 677889999999999999999986111111 11112223333322 1111 1 22 11122334668899999
Q ss_pred ecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 010539 460 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 493 (508)
Q Consensus 460 aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~ 493 (508)
||++++. +.++++||+.||+++|++|+..++.+
T Consensus 456 aG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 456 AGDHLSN-AIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp CSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred eEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999974 45899999999999999999988654
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.97 E-value=3.8e-29 Score=253.20 Aligned_cols=406 Identities=16% Similarity=0.115 Sum_probs=229.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----------------------hhHHHHHHHcCCCCcc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----------------------PNIQNLFGELGINDRL 112 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----------------------~~~~~l~~~lg~~~~~ 112 (508)
..+||+|||||++||+||+.|+++|++|+|||++++++|.. ..+.++++++|+....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 111 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNE 111 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCcee
Confidence 46899999999999999999999999999999999886642 2456788888875321
Q ss_pred ccc-cccceeecCCCCCCc-------ccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHh-hcchhhHh--cCcchhhc
Q 010539 113 QWK-EHSMIFAMPNKPGEF-------SRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFA-IGLLPAII--GGQAYVEA 181 (508)
Q Consensus 113 ~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 181 (508)
... .....+......... ..+.+.. .+.. ......+.+... ........ ........
T Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (498)
T 2iid_A 112 FSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPV-KPSE-----------AGKSAGQLYEESLGKVVEELKRTNCSYILNK 179 (498)
T ss_dssp ECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCC-CGGG-----------TTCCHHHHHHHHTHHHHHHHHHSCHHHHHHH
T ss_pred ecccCCccEEEeCCeeecccccccCccccccCC-Cccc-----------cCCCHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 100 000111110000000 0000000 0000 000000110000 00000000 00011123
Q ss_pred ccCccHHHHHHHcC-CChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhhccCCeEEeecCCccccchHHHHHHH
Q 010539 182 QDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHI 260 (508)
Q Consensus 182 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l 260 (508)
.+..++.+|+...+ +.....+ .+..+....... ..+.......... + ..+..+..+.|| ...+++.|.+.+
T Consensus 180 ~~~~s~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~~gG-~~~l~~~l~~~l 251 (498)
T 2iid_A 180 YDTYSTKEYLIKEGDLSPGAVD-MIGDLLNEDSGY---YVSFIESLKHDDI-F--AYEKRFDEIVDG-MDKLPTAMYRDI 251 (498)
T ss_dssp HTTSBHHHHHHHTSCCCHHHHH-HHHHHTTCGGGT---TSBHHHHHHHHHH-H--TTCCCEEEETTC-TTHHHHHHHHHT
T ss_pred hhhhhHHHHHHHccCCCHHHHH-HHHHhcCcccch---hHHHHHHHHHHhc-c--ccCcceEEeCCc-HHHHHHHHHHhc
Confidence 35678899998865 3332222 222221111000 1111111111111 1 123345556665 678888888776
Q ss_pred HHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCc----EEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEE
Q 010539 261 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVIN 336 (508)
Q Consensus 261 ~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~----~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 336 (508)
.+ +|+++++|++|..++++ + .|++.+|+ ++.||+||+|+|+..+..+...+..+....++++++.+.+..+
T Consensus 252 ~~---~i~~~~~V~~I~~~~~~-v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~k 326 (498)
T 2iid_A 252 QD---KVHFNAQVIKIQQNDQK-V-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGTK 326 (498)
T ss_dssp GG---GEESSCEEEEEEECSSC-E-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEE
T ss_pred cc---ccccCCEEEEEEECCCe-E-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCcceeE
Confidence 54 89999999999985444 3 47776664 5899999999999998887544344546678889999999999
Q ss_pred EEEEeccccccccc---ccccccCccceeecccccccccccCCCccEEEEEecC--chhhcCCChHHHHHHHHHHHHHhC
Q 010539 337 IHIWFDRKLKNTYD---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLF 411 (508)
Q Consensus 337 v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~ 411 (508)
|++.|++++|+..+ +..+.+.+...+++.. ...|++..++..+..+ ...|..++++++.+.++++|.+++
T Consensus 327 v~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s-----~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~ 401 (498)
T 2iid_A 327 IFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYPN-----HNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIH 401 (498)
T ss_dssp EEEEESSCGGGGGTCCSSEEEESSTTCEEECCS-----SCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccCCCccCCcccCCCCcceEEECC-----CCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHc
Confidence 99999999986521 2222333333333221 1124445555444333 356778899999999999999999
Q ss_pred CCCccc-ccccceEEEeeEeecCC--ceecc-CCC-CCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHH
Q 010539 412 PDEISA-DQSKAKIVKYHVVKTPR--SVYKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 486 (508)
Q Consensus 412 ~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~-~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~i 486 (508)
+..... ...........|...|. |.|.+ .++ .....+.++.|.++|||||++++..+ ++|+||+.||++||++|
T Consensus 402 g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GAi~SG~raA~~i 480 (498)
T 2iid_A 402 QLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDSTIKSGLRAARDV 480 (498)
T ss_dssp TCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHHHHHHHHHHHHH
T ss_pred CCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHHHHHHHHHHHHH
Confidence 842111 00001122233333333 23322 222 11122334567899999999997654 89999999999999999
Q ss_pred HHHHHH
Q 010539 487 VQDYVL 492 (508)
Q Consensus 487 l~~l~~ 492 (508)
++.++.
T Consensus 481 ~~~l~~ 486 (498)
T 2iid_A 481 NLASEN 486 (498)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998853
No 16
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.97 E-value=2.1e-29 Score=253.00 Aligned_cols=233 Identities=18% Similarity=0.230 Sum_probs=160.2
Q ss_pred ccccchHHHHHHHHHc--------CCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcC--cch
Q 010539 248 PPERLCLPIVEHIQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP--ENW 317 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~--------g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~--~~~ 317 (508)
+...+++.|.+.+.+. |++|+++++|++|..++++ + .|++.+|+++.||+||+|+|++.+..++. .+.
T Consensus 204 G~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~ 281 (472)
T 1b37_A 204 GYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPK 281 (472)
T ss_dssp CTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETTSCEEEESEEEECSCHHHHHTTSSEEESC
T ss_pred cHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECCCCEEEcCEEEEecCHHHhccCCeeECCC
Confidence 3778888888877654 6899999999999985444 4 38888998899999999999999988642 233
Q ss_pred hccHHHHHHhhcCCcCEEEEEEEecccccccc-cc--cccccCc--cceeecccccccccccCCCccEEEEEecC--chh
Q 010539 318 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DH--LLFSRSS--LLSVYADMSLTCKEYYNPNQSMLELVFAP--AEE 390 (508)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 390 (508)
.+....+++..+.+.++.+|++.|++++|+.. .. +++.... ....+... .+ . .++..++..++.+ ++.
T Consensus 282 Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~p~~~~l~~~~~~~~a~~ 356 (472)
T 1b37_A 282 LPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEF---EK-Q-YPDANVLLVTVTDEESRR 356 (472)
T ss_dssp CCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEEC---TT-T-STTCCEEEEEEEHHHHHH
T ss_pred CCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecc---cC-C-CCCCCEEEEEechHHHHH
Confidence 34456788888888899999999999998642 11 1111111 11111111 11 1 2344555444433 246
Q ss_pred hcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeec---C--Cceec-cCCCCCC-CCCCCCCCCCceEEeccc
Q 010539 391 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKT---P--RSVYK-TIPNCEP-CRPLQRSPVEGFYLAGDY 463 (508)
Q Consensus 391 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~-~~~~~~~-~~~~~~~~~~~l~~aG~~ 463 (508)
|..++++++.+.++++|.+++|....+.+ ......+| | .+.|. +.++... ..+.+++|+++|||||++
T Consensus 357 ~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~-----~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~ 431 (472)
T 1b37_A 357 IEQQSDEQTKAEIMQVLRKMFPGKDVPDA-----TDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEH 431 (472)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCTTSCCCCC-----SEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGG
T ss_pred HHhCCHHHHHHHHHHHHHHHcCCCCCCCC-----ceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecc
Confidence 77889999999999999999975321211 12222333 2 34343 2344321 234457889999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 010539 464 TKQKYLASMEGAVLSGKLCAQAIVQDYVL 492 (508)
Q Consensus 464 ~~~~~~~~~~gA~~sg~~aA~~il~~l~~ 492 (508)
+++.+.++|+||+.||++||++|++.++.
T Consensus 432 t~~~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 432 TSEHYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp GCTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 99877789999999999999999998864
No 17
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.96 E-value=7.7e-29 Score=258.41 Aligned_cols=223 Identities=21% Similarity=0.279 Sum_probs=147.6
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh--cCcchhccHHHHHHhhcCCcC
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ--LPENWKEMAYFKRLEKLVGVP 333 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l--l~~~~~~~~~~~~~~~~~~~~ 333 (508)
+.+.+. .|++|+++++|++|+.++++ + .|++.+|+++.||+||+|+|+..++.. ...+..+.....++..+.+.+
T Consensus 536 l~~aLa-~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~ 612 (776)
T 4gut_A 536 IIEKLA-EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGI 612 (776)
T ss_dssp HHHHHH-TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEEC
T ss_pred HHHHHH-hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCee
Confidence 444443 47899999999999975444 3 488888888999999999999999752 122233345678888999999
Q ss_pred EEEEEEEecccccccc--ccccc-------ccCccceeecccccccccccCCC-ccEEEEEecC--chhhcCCChHHHHH
Q 010539 334 VINIHIWFDRKLKNTY--DHLLF-------SRSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIID 401 (508)
Q Consensus 334 ~~~v~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~ 401 (508)
+.+|++.|++++|+.. +..++ +...+...+.+. .+.+ ..++..++.+ +..+..++++++++
T Consensus 613 ~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~-------~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~ 685 (776)
T 4gut_A 613 IEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDM-------DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQ 685 (776)
T ss_dssp CEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEES-------CTTSCSCEEEEEECTHHHHHHHTSCHHHHHH
T ss_pred EEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecC-------CCCCCceEEEEEecchhHHHHHcCCHHHHHH
Confidence 9999999999999642 11111 111222222221 2233 3444444544 36678899999999
Q ss_pred HHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccC-CCC-CCCCCCCCCC-CCceEEecccccCCCCCcHHHHHHH
Q 010539 402 ATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTI-PNC-EPCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLS 478 (508)
Q Consensus 402 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~-~~~l~~aG~~~~~~~~~~~~gA~~s 478 (508)
.++++|.++||....+.+....+.+|....+..|.|.+. ++. ....+.+..| .++|||||++++..|+++|+||+.|
T Consensus 686 ~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~S 765 (776)
T 4gut_A 686 QCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLS 765 (776)
T ss_dssp HHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHH
T ss_pred HHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHH
Confidence 999999999986433322222222222222233444432 232 1112223445 4899999999998888999999999
Q ss_pred HHHHHHHHHH
Q 010539 479 GKLCAQAIVQ 488 (508)
Q Consensus 479 g~~aA~~il~ 488 (508)
|+++|++|++
T Consensus 766 G~RaA~~Ila 775 (776)
T 4gut_A 766 GVREASKIAA 775 (776)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999999974
No 18
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.96 E-value=1.1e-27 Score=230.39 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=154.7
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcch--hccHHHHHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW--KEMAYFKRL 326 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~--~~~~~~~~~ 326 (508)
...+.+.|.+.+ |++|+++++|++|+.++++ +.|++.+|+++.+|.||+|+|+..+.+|+++.. .+......+
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l 185 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQL 185 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHH
Confidence 556666666544 8999999999999985444 348888887789999999999999999987532 223457888
Q ss_pred hhcCCcCEEEEEEEecccccc--cccccccccCcccee-eccccccccccc-CCCccEEEEEecC--chhhcCCChHHHH
Q 010539 327 EKLVGVPVINIHIWFDRKLKN--TYDHLLFSRSSLLSV-YADMSLTCKEYY-NPNQSMLELVFAP--AEEWISCSDSEII 400 (508)
Q Consensus 327 ~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~ 400 (508)
..+.|.++.+|++.|++++|. .+.+++..+.+...+ +.+.+. +.+. +++..++.+..++ .+++.+.+++++.
T Consensus 186 ~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 263 (342)
T 3qj4_A 186 EAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK--RNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQ 263 (342)
T ss_dssp HTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH--TTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHH
T ss_pred hcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC--CCCCCCCCCceEEEECCHHHHHHhhcCCHHHHH
Confidence 999999999999999987543 334444444443333 333222 2211 2233333333333 2556778999999
Q ss_pred HHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCC-CCCCceEEecccccCCCCCcHHHHHHHH
Q 010539 401 DATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSG 479 (508)
Q Consensus 401 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~aG~~~~~~~~~~~~gA~~sg 479 (508)
+.++++|.+++|.... +..+.+.+|..+.+.|... .....+. ...++|++|||++.+ .++++|+.||
T Consensus 264 ~~~~~~l~~~~g~~~~-------p~~~~v~rW~~a~p~~~~~--~~~~~~~~~~~~~l~laGd~~~g---~~v~~ai~sg 331 (342)
T 3qj4_A 264 ELVFQQLENILPGLPQ-------PIATKCQKWRHSQVTNAAA--NCPGQMTLHHKPFLACGGDGFTQ---SNFDGCITSA 331 (342)
T ss_dssp HHHHHHHHHHSCSCCC-------CSEEEEEEETTCSBSSCCS--SSCSCEEEETTTEEEECSGGGSC---SSHHHHHHHH
T ss_pred HHHHHHHHHhccCCCC-------CceeeeccccccccccccC--CCcceeEecCCccEEEEccccCC---CCccHHHHHH
Confidence 9999999999985333 2445678888887765431 1111222 467899999999987 7999999999
Q ss_pred HHHHHHHHHH
Q 010539 480 KLCAQAIVQD 489 (508)
Q Consensus 480 ~~aA~~il~~ 489 (508)
++||++|++.
T Consensus 332 ~~aa~~i~~~ 341 (342)
T 3qj4_A 332 LCVLEALKNY 341 (342)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhh
Confidence 9999999764
No 19
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.96 E-value=1.2e-28 Score=246.85 Aligned_cols=395 Identities=14% Similarity=0.116 Sum_probs=249.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcC-CceEEEeccccCCCCC----------------------hhHHHHHHHcCCCCc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLVGAY----------------------PNIQNLFGELGINDR 111 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g-~~V~vlE~~~~~~g~~----------------------~~~~~l~~~lg~~~~ 111 (508)
...+||+|||||++||+||++|+++| .+|+|+|+++.++|.. +.+.++++++. +..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~ 85 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGW 85 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhh
Confidence 35689999999999999999999998 7999999998875532 33456666653 211
Q ss_pred cccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHH
Q 010539 112 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 191 (508)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (508)
........++ . .+.+..+.+... + ..+........+........ .....+..++.+|+
T Consensus 86 ~~~~~~~~~~-~---~g~~~~~P~~~~----~----------~~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~ 143 (484)
T 4dsg_A 86 NVLQRESWVW-V---RGRWVPYPFQNN----I----------HRLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESF 143 (484)
T ss_dssp EEEECCCEEE-E---TTEEEESSGGGC----G----------GGSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHH
T ss_pred hhccCceEEE-E---CCEEEEeCccch----h----------hhCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHH
Confidence 1111000011 0 111111110000 0 00111122222212111100 01123567999999
Q ss_pred HHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHH---------HHHHHHhhhc------cCCeEEeecCCccccchHHH
Q 010539 192 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCIL---------IALNRFLQEK------HGSKMAFLDGNPPERLCLPI 256 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~------~g~~~~~~~g~~~~~l~~~l 256 (508)
.+. +...+.+.++.++..++|..++++++..+.. ..+...+... ....+.|+..|++..+++.|
T Consensus 144 ~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~l 222 (484)
T 4dsg_A 144 TRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAI 222 (484)
T ss_dssp HHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHH
T ss_pred HHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHH
Confidence 887 6667777788899999999999888764321 1112222211 12234555533488899999
Q ss_pred HHHHHHcCCEEEeC--ceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCc--chhccHHHHHHhhcCCc
Q 010539 257 VEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGV 332 (508)
Q Consensus 257 ~~~l~~~g~~i~~~--~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~--~~~~~~~~~~~~~~~~~ 332 (508)
++.+.+. +|+++ ++|++|..+ ++. |++.+|+++.||+||+|+|++.+.+++.+ ...+....+.+..+.|.
T Consensus 223 a~~l~~~--~i~~~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~ 296 (484)
T 4dsg_A 223 KEKLPSE--KLTFNSGFQAIAIDAD-AKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYS 296 (484)
T ss_dssp HHHSCGG--GEEECGGGCEEEEETT-TTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEE
T ss_pred HhhhhhC--eEEECCCceeEEEEec-CCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcC
Confidence 8877543 78999 569999963 442 55678888999999999999999998854 11233556778899999
Q ss_pred CEEEEEEEeccccccc---cccccccc-CccceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHHH
Q 010539 333 PVINIHIWFDRKLKNT---YDHLLFSR-SSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 408 (508)
Q Consensus 333 ~~~~v~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 408 (508)
++.++++.|+++.... ..++++.+ +.....+...+..++...|++.+++.+.+... .....+++++++.++++|.
T Consensus 297 s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~~L~ 375 (484)
T 4dsg_A 297 STNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIVGCL 375 (484)
T ss_dssp EEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHHHHH
Confidence 9999999999864321 12233322 22222333445566777778877766655433 3445789999999999999
Q ss_pred HhCCCCcccccccceEEEeeEeecCCceeccCCCCCCC----CCCCCCCCCceEEecccccCCCC-CcHHHHHHHHHHHH
Q 010539 409 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCA 483 (508)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~aG~~~~~~~~-~~~~gA~~sg~~aA 483 (508)
++.+.... ..+...++.+|+.+++.|.+++... +..+. .. ||+++|......|. .++++|+.||+.||
T Consensus 376 ~~~~~~~~-----~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa 448 (484)
T 4dsg_A 376 ASNLLLPE-----DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAI 448 (484)
T ss_dssp HTTSCCTT-----CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHH
T ss_pred HcCCCCcc-----ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCCcccccCCCChHHHHHHHHHHH
Confidence 98643211 1244556788999999988874321 12122 23 89999998776652 37999999999999
Q ss_pred HHHH
Q 010539 484 QAIV 487 (508)
Q Consensus 484 ~~il 487 (508)
++|+
T Consensus 449 ~~i~ 452 (484)
T 4dsg_A 449 DHVL 452 (484)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9998
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.96 E-value=3.2e-28 Score=246.85 Aligned_cols=242 Identities=13% Similarity=0.140 Sum_probs=143.9
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh-----------cCcch
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-----------LPENW 317 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l-----------l~~~~ 317 (508)
...+++.|.+.+. +++|++|++|++|..++++ .+.|++.+|+++.||+||+|+|+..+... ...+.
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~~-~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~ 277 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITREPSK-NVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPP 277 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESC
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCCC-eEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCC
Confidence 4455444444332 2579999999999974233 34688889988999999999999998642 11222
Q ss_pred hccHHHHHHhhcCCcCEEEEEEEecccccccc-cccccccC---ccceeeccc---------------------c-cccc
Q 010539 318 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLFSRS---SLLSVYADM---------------------S-LTCK 371 (508)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~---------------------~-~~~~ 371 (508)
.+....++++++.+.++.||++.|++++|+.- ..+....+ ++...+... . ...+
T Consensus 278 Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (516)
T 1rsg_A 278 LKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQP 357 (516)
T ss_dssp CCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSC
T ss_pred CCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCc
Confidence 34466788899999999999999999999643 22211111 110000000 0 0000
Q ss_pred -----cccCCCccEEEEEe-cC-chhhcCC--ChHHHHH---HHHHHHHHhCCC-----Ccc-cc-------cccceEEE
Q 010539 372 -----EYYNPNQSMLELVF-AP-AEEWISC--SDSEIID---ATMKELAKLFPD-----EIS-AD-------QSKAKIVK 426 (508)
Q Consensus 372 -----~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~---~~~~~l~~~~~~-----~~~-~~-------~~~~~~~~ 426 (508)
.....+..++..+. ++ +..+..+ +++++.+ .++++|.++||. ... +. +....+..
T Consensus 358 ~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~ 437 (516)
T 1rsg_A 358 LFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIV 437 (516)
T ss_dssp EEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEE
T ss_pred eeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEE
Confidence 01122333443333 33 2455566 7888765 477777777762 111 10 11112333
Q ss_pred eeEeecCC--ceecc-CCCCCCC--CCCCC-CCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 010539 427 YHVVKTPR--SVYKT-IPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 493 (508)
Q Consensus 427 ~~~~~~~~--~~~~~-~~~~~~~--~~~~~-~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~ 493 (508)
..|...|. |.|.+ .|+.... ...++ .+.++|||||++++..|+++|+||+.||++||++|++.++..
T Consensus 438 ~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 438 SNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp CCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred ecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 33333344 44443 2332110 11122 367899999999998888999999999999999999988653
No 21
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.95 E-value=5.4e-26 Score=238.32 Aligned_cols=236 Identities=18% Similarity=0.234 Sum_probs=153.8
Q ss_pred EeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC------CcEEEccEEEEccChHHHhhhc--
Q 010539 242 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL-- 313 (508)
Q Consensus 242 ~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~------g~~i~ad~VI~A~~~~~~~~ll-- 313 (508)
..+.|| ...|++.|.+ +++|++|++|++|.+++++. .|++.+ |+++.||+||+|+|+.+++.++
T Consensus 565 ~~~~gG-~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~gV--~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~ 636 (852)
T 2xag_A 565 LTVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASGC--EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 636 (852)
T ss_dssp EEETTC-TTHHHHHHTT-----TCCEECSEEEEEEEEETTEE--EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred EEecCc-HHHHHHHHHh-----CCCEEeCCeEEEEEEcCCcE--EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcc
Confidence 334444 5566655543 46899999999999865543 466654 5679999999999999998842
Q ss_pred --CcchhccHHHHHHhhcCCcCEEEEEEEecccccccc-ccccc---c--cCccceeecccccccccccCCCccEEEEEe
Q 010539 314 --PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLF---S--RSSLLSVYADMSLTCKEYYNPNQSMLELVF 385 (508)
Q Consensus 314 --~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (508)
..+..+....+++..+.+.++.||++.|++++|+.. +.+.+ . .....+.+++. . +..++..++
T Consensus 637 I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~------~---~~pvLl~~v 707 (852)
T 2xag_A 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL------Y---KAPILLALV 707 (852)
T ss_dssp SEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEEC------S---SSSEEEEEE
T ss_pred cccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecC------C---CCCEEEEEe
Confidence 122333345678899999999999999999999742 22211 1 11122222221 1 122444444
Q ss_pred cC--chhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceecc-CCCCC-CC-------------CC
Q 010539 386 AP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT-IPNCE-PC-------------RP 448 (508)
Q Consensus 386 ~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-------------~~ 448 (508)
.+ +..+..++++++++.++++|.++||....+.+....+.+|....+..|.|.+ .++.. .. ++
T Consensus 708 ~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p 787 (852)
T 2xag_A 708 AGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIP 787 (852)
T ss_dssp CHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSST
T ss_pred cCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccc
Confidence 33 3567788999999999999999998743322221122222222222244443 23321 10 12
Q ss_pred CCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 010539 449 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 494 (508)
Q Consensus 449 ~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~~ 494 (508)
.+..+.++|||||++++..|+++|+||+.||++||++|++.+....
T Consensus 788 ~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~ 833 (852)
T 2xag_A 788 GAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM 833 (852)
T ss_dssp TCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCG
T ss_pred cccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 2345678999999999988889999999999999999999986643
No 22
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.94 E-value=2.6e-25 Score=230.85 Aligned_cols=232 Identities=18% Similarity=0.239 Sum_probs=149.7
Q ss_pred eecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC------CcEEEccEEEEccChHHHhhhc---
Q 010539 243 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL--- 313 (508)
Q Consensus 243 ~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~------g~~i~ad~VI~A~~~~~~~~ll--- 313 (508)
.+.|| ...|++.|.+ +++|++|++|++|..++++. .|++.+ |+++.||+||+|+|+.+++.+.
T Consensus 395 ~~~gG-~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~v--~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i 466 (662)
T 2z3y_A 395 TVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASGC--EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 466 (662)
T ss_dssp EETTC-TTHHHHHHTT-----TCEEETTEEEEEEEEETTEE--EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred eecCc-HHHHHHHHHh-----cCceecCCeEEEEEECCCcE--EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCce
Confidence 34444 5566555543 57999999999999865553 466654 5679999999999999998742
Q ss_pred -CcchhccHHHHHHhhcCCcCEEEEEEEecccccccc-ccccc---cc--CccceeecccccccccccCCCccEEEEEec
Q 010539 314 -PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLF---SR--SSLLSVYADMSLTCKEYYNPNQSMLELVFA 386 (508)
Q Consensus 314 -~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (508)
..+..+....++++.+.+.++.||++.|++++|+.. +.+.+ .. ......+++.. +..++..++.
T Consensus 467 ~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---------~~~vL~~~~~ 537 (662)
T 2z3y_A 467 QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---------KAPILLALVA 537 (662)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---------SSSEEEEEEC
T ss_pred EEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---------CCCEEEEEec
Confidence 222333355678899999999999999999999742 22111 11 11122222111 2234444444
Q ss_pred C--chhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceecc-CCCCCC--------------CCCC
Q 010539 387 P--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT-IPNCEP--------------CRPL 449 (508)
Q Consensus 387 ~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~ 449 (508)
+ +..+..++++++++.++++|.++||....+.+....+.+|....+..|.|.+ .++... .++.
T Consensus 538 G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~ 617 (662)
T 2z3y_A 538 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPG 617 (662)
T ss_dssp THHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC------
T ss_pred cHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccccc
Confidence 4 3567788999999999999999998643322221112222222222234443 233211 0122
Q ss_pred CCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 010539 450 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 491 (508)
Q Consensus 450 ~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~ 491 (508)
++.+.++|||||++++..|+++|+||+.||++||++|++.++
T Consensus 618 ~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 618 APQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp ---CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 345678999999999988889999999999999999999875
No 23
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.93 E-value=3.9e-25 Score=225.28 Aligned_cols=255 Identities=12% Similarity=0.059 Sum_probs=160.6
Q ss_pred cCCeEEeecCCccccchHHHHHHHHHcCCEEEeCceee--EEEEcCCCc-----EEEE-EEcCCc--EEEccEEEEccCh
Q 010539 237 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ--KIELNDDGT-----VKNF-LLTNGN--VIDGDAYVFATPV 306 (508)
Q Consensus 237 ~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~--~I~~~~~g~-----~~~V-~~~~g~--~i~ad~VI~A~~~ 306 (508)
.+..+..+.|| ...|.+.|.+.+.+ |..|+++++|+ +|..++++. .+.| .+.+|+ ++.||+||+|+|.
T Consensus 335 ~~~~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~ 412 (721)
T 3ayj_A 335 YSNEYTLPVTE-NVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPH 412 (721)
T ss_dssp TTCEECCSSSS-THHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCH
T ss_pred CccceeEECCc-HHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCH
Confidence 34455566665 78899999988753 56788999999 999865541 2346 456676 7999999999999
Q ss_pred HHHhh------hc-------C--------------cch-h-c-------cHHHHHHhhcCCcCEEEEEEEe-----cccc
Q 010539 307 DILKL------QL-------P--------------ENW-K-E-------MAYFKRLEKLVGVPVINIHIWF-----DRKL 345 (508)
Q Consensus 307 ~~~~~------ll-------~--------------~~~-~-~-------~~~~~~~~~~~~~~~~~v~~~~-----~~~~ 345 (508)
..+.. +- . .+. . + .....+++++.+.+..||++.| +++|
T Consensus 413 ~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~f 492 (721)
T 3ayj_A 413 DQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPW 492 (721)
T ss_dssp HHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTT
T ss_pred HHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCc
Confidence 98854 21 1 111 1 3 4667889999999999999999 9999
Q ss_pred cccccc----cccccCccceeecccccccccccCCCccEEEEEecC---chhh------cCCChH-------HHHHHHHH
Q 010539 346 KNTYDH----LLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP---AEEW------ISCSDS-------EIIDATMK 405 (508)
Q Consensus 346 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~-------~~~~~~~~ 405 (508)
|+...+ ..+++.++..+|...+.....+.+++..++...|+. +..| ..++.+ .+++.+++
T Consensus 493 W~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~ 572 (721)
T 3ayj_A 493 VPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVN 572 (721)
T ss_dssp SCEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHH
T ss_pred ccccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHH
Confidence 876422 234565665443211000012233444444443332 2444 333333 44999999
Q ss_pred HHH--HhCCCCccc---------ccc-cceEEEeeEeecC-Cceec-cCCCC-------CCCC--CCCCCCCCceEEecc
Q 010539 406 ELA--KLFPDEISA---------DQS-KAKIVKYHVVKTP-RSVYK-TIPNC-------EPCR--PLQRSPVEGFYLAGD 462 (508)
Q Consensus 406 ~l~--~~~~~~~~~---------~~~-~~~~~~~~~~~~~-~~~~~-~~~~~-------~~~~--~~~~~~~~~l~~aG~ 462 (508)
+|. +++|+.... ... ......+.|...| .|.|. +.|+. .++. .....+.++||||||
T Consensus 573 ~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe 652 (721)
T 3ayj_A 573 RAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASD 652 (721)
T ss_dssp HTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSG
T ss_pred HHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeeh
Confidence 999 888863200 001 1123455555555 22332 23442 1111 123446789999999
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 010539 463 YTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 494 (508)
Q Consensus 463 ~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~~ 494 (508)
+++. +.++++||+.||++||.+|+..++...
T Consensus 653 ~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 653 SYSH-LGGWLEGAFMSALNAVAGLIVRANRGD 683 (721)
T ss_dssp GGSS-CTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhcc-CCceehHHHHHHHHHHHHHHHHhcCCC
Confidence 9985 458999999999999999999997743
No 24
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.92 E-value=2.4e-23 Score=199.70 Aligned_cols=218 Identities=16% Similarity=0.149 Sum_probs=144.7
Q ss_pred HHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEE-ccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCc
Q 010539 254 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGV 332 (508)
Q Consensus 254 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~-ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 332 (508)
..+.+.+.+ |++|+++++|++|+.++++ +.|++.+|+.+. +|.||+|+|+....++++... .....+..+.|.
T Consensus 110 ~~l~~~l~~-g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~---~l~~~~~~~~~~ 183 (336)
T 1yvv_A 110 SAITRAMRG-DMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAP---KLASVVAGVKMD 183 (336)
T ss_dssp HHHHHHHHT-TCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSCHHHHGGGGTTCH---HHHHHHTTCCEE
T ss_pred HHHHHHHHc-cCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCCHHHHHHhhccCH---HHHHHHhhcCcc
Confidence 345555544 8999999999999985555 348888887654 999999999999988875421 334667888888
Q ss_pred CEEEEEEEecccccccccccccccCccceeecccccccccccCCCccEEEEEecC--chhhcCCChHHHHHHHHHHHHHh
Q 010539 333 PVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKL 410 (508)
Q Consensus 333 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 410 (508)
++.++++.+++++|.....++..+.+ .++.++.+. .+...+.+..++ +...+ .+.+...+++++.+.+++.|.++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-~p~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (336)
T 1yvv_A 184 PTWAVALAFETPLQTPMQGCFVQDSP-LDWLARNRS-KPERDDTLDTWI-LHATSQWSRQNLDASREQVIEHLHGAFAEL 260 (336)
T ss_dssp EEEEEEEEESSCCSCCCCEEEECSSS-EEEEEEGGG-STTCCCSSEEEE-EEECHHHHHHTTTSCHHHHHHHHHHHHHTT
T ss_pred ceeEEEEEecCCCCCCCCeEEeCCCc-eeEEEecCc-CCCCCCCCcEEE-EEeCHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999999887665555444333 333322221 121111112222 22222 35566789999999999999999
Q ss_pred CCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 010539 411 FPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 490 (508)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l 490 (508)
+|.... .+. .....+|..+.+.+..+.. ....+.++|+||||++++ +++++|+.||.++|++|++.+
T Consensus 261 lg~~~~-~p~-----~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 261 IDCTMP-APV-----FSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp CSSCCC-CCS-----EEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCC-CCc-----EEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 985321 111 1223334444333332211 112355899999999986 799999999999999999988
Q ss_pred HHH
Q 010539 491 VLL 493 (508)
Q Consensus 491 ~~~ 493 (508)
.+.
T Consensus 328 ~~~ 330 (336)
T 1yvv_A 328 QLE 330 (336)
T ss_dssp TC-
T ss_pred hhh
Confidence 653
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.91 E-value=3.6e-23 Score=204.99 Aligned_cols=387 Identities=14% Similarity=0.161 Sum_probs=202.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC-CceEEEeccccCCCC---------------------ChhHHHHHHHcCCCCccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLVGA---------------------YPNIQNLFGELGINDRLQ 113 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g-~~V~vlE~~~~~~g~---------------------~~~~~~l~~~lg~~~~~~ 113 (508)
+++||+|||||++||+||++|+++| ++|+|+|++++++|. ++.+.++++++|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~- 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG- 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS-
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCcccc-
Confidence 5689999999999999999999999 999999999988553 35677888888875421
Q ss_pred cccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCc--chhhcccCccHHHHH
Q 010539 114 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ--AYVEAQDGLTVQEWM 191 (508)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 191 (508)
......+.. ..+... .....+.....+...+. ............+.... .........++.+|+
T Consensus 84 -~~~~~~~~~--~~g~~~---~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 149 (424)
T 2b9w_A 84 -PKLRREFLH--EDGEIY---VPEKDPVRGPQVMAAVQ--------KLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFL 149 (424)
T ss_dssp -CCCCEEEEC--TTSCEE---CGGGCTTHHHHHHHHHH--------HHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHH
T ss_pred -ccccceeEc--CCCCEe---ccccCcccchhHHHHHH--------HHHHHHhhhhhhcccccchhhhhhhhccCHHHHH
Confidence 111111111 111110 00000110000000000 00000000000000000 001122357999999
Q ss_pred HHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHH--HHhhhccCCeEEeecCCccccchHHHHHHHHHcCCEEEe
Q 010539 192 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALN--RFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRL 269 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~ 269 (508)
++.+.. .+.+.+..++....+ .++.+++..+.+..+. ..+....+..+ .+.+| ...+++.|.+.+ +.+|++
T Consensus 150 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~~l~~~l~~~l---~~~v~~ 222 (424)
T 2b9w_A 150 ALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLW-TWADG-TQAMFEHLNATL---EHPAER 222 (424)
T ss_dssp HHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCB-CCTTC-HHHHHHHHHHHS---SSCCBC
T ss_pred HhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceE-EeCCh-HHHHHHHHHHhh---cceEEc
Confidence 998765 355544444444333 4567777766532211 11111223333 33333 556666665444 568999
Q ss_pred CceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEecccccccc
Q 010539 270 NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY 349 (508)
Q Consensus 270 ~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 349 (508)
+++|++|..+ ++.+ .|++.+|+ +.||+||+|+|++.+..+++.... ....+.++.+.+.. +.+.+...++. +
T Consensus 223 ~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 294 (424)
T 2b9w_A 223 NVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPLEKFLDYSDADDD---EREYFSKIIHQQYM-VDACLVKEYPT-I 294 (424)
T ss_dssp SCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCHHHHTTSBCCCHH---HHHHHTTCEEEEEE-EEEEEESSCCS-S
T ss_pred CCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCHHHHhhccCCCHH---HHHHHhcCCcceeE-EEEEEeccCCc-c
Confidence 9999999974 4444 38888885 999999999999988887764322 22334555554432 22233333321 1
Q ss_pred cccccccC-c-cce-eecccccccccccCCC-ccEEE-EEecCchhhcCCChHHHHHHHHHHHHHhCCCCcccccccceE
Q 010539 350 DHLLFSRS-S-LLS-VYADMSLTCKEYYNPN-QSMLE-LVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI 424 (508)
Q Consensus 350 ~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 424 (508)
..++..+. . ..+ .+++ ....+++ ..++. +.......+...+++++.+.++++|.++ +.... . . +
T Consensus 295 ~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l-~~~~~-~-~---~ 363 (424)
T 2b9w_A 295 SGYVPDNMRPERLGHVMVY-----YHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETF-GHPVE-K-I---I 363 (424)
T ss_dssp EEECGGGGSGGGTTSCCEE-----EECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHT-TCCEE-E-E---E
T ss_pred cccccCCCCCcCCCcceEE-----eeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHc-CCccc-c-c---c
Confidence 22222110 0 111 1111 1111122 23333 3333345566778899999999999994 43211 1 0 1
Q ss_pred EEeeEeecCC-ceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHH
Q 010539 425 VKYHVVKTPR-SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 487 (508)
Q Consensus 425 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il 487 (508)
....|...|. +...+..|+.. +.....+.+||||||+++.. +.+|+|+.||+++|++|+
T Consensus 364 ~~~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 364 EEQTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEEEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred cccceeeeeccCHHHHhccHHH-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 1111211111 11111222110 01113345799999999875 789999999999999885
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.85 E-value=1.5e-18 Score=172.39 Aligned_cols=366 Identities=13% Similarity=0.123 Sum_probs=189.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCChh-------------------------------------
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPN------------------------------------- 98 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~~------------------------------------- 98 (508)
..+||||||||++||+||+.|+++|++|+|||++++.||....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~ 89 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPK 89 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccccc
Confidence 5689999999999999999999999999999999999886433
Q ss_pred -------HHHHHHHcCCCCccccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHH---hhcc
Q 010539 99 -------IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF---AIGL 168 (508)
Q Consensus 99 -------~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 168 (508)
+.++++++|+...+.+...+..+.+. .+.. +.+ +.. .. ..+.. .+..+.++..+ ....
T Consensus 90 ~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~--~~~----p~~--~~-~~~~~-~l~~~~~~~~~~~~~~~~ 157 (453)
T 2bcg_G 90 FLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKI--YKV----PAN--EI-EAISS-PLMGIFEKRRMKKFLEWI 157 (453)
T ss_dssp BEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEE--EEC----CSS--HH-HHHHC-TTSCHHHHHHHHHHHHHH
T ss_pred eeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeE--EEC----CCC--hH-HHHhh-hccchhhHHHHHHHHHHH
Confidence 12334444443333333322222211 1110 111 111 01 11111 11122121111 1000
Q ss_pred hhhHhcCcchhh--cccCccHHHHHHHcCCChhhHHHHHHHHHhhcccC-CCCcchHHHHHHHHHHH---hhhccCCeEE
Q 010539 169 LPAIIGGQAYVE--AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI-NPDELSMQCILIALNRF---LQEKHGSKMA 242 (508)
Q Consensus 169 ~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~g~~~~ 242 (508)
............ .....++.+|+++.+....+.. ++..... .... +....+....+..+..+ +.......+.
T Consensus 158 ~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~ 235 (453)
T 2bcg_G 158 SSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQPARPSFERILLYCQSVARYGKSPYL 235 (453)
T ss_dssp HHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred HHhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCchHHHHHHHHHHHHHHHhhcCCceE
Confidence 000000000000 1356799999999877655443 2211111 0000 00111222322211111 1112234565
Q ss_pred eecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcC-CCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccH
Q 010539 243 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMA 321 (508)
Q Consensus 243 ~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~ 321 (508)
++.|| ...+++.|.+.+++.|++|+++++|++|..+. ++++++|.+ +|+++.||.||+|++++.- ++
T Consensus 236 ~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~-~l--------- 303 (453)
T 2bcg_G 236 YPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE-KC--------- 303 (453)
T ss_dssp EETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG-GE---------
T ss_pred eeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch-hh---------
Confidence 77776 78999999999999999999999999999742 566667887 4778999999999998732 11
Q ss_pred HHHHHhhcCCcCEEEEEEEeccccccc----ccccccccCc---cceeecc-cccccccccCCCccEEEEEe-cCchhhc
Q 010539 322 YFKRLEKLVGVPVINIHIWFDRKLKNT----YDHLLFSRSS---LLSVYAD-MSLTCKEYYNPNQSMLELVF-APAEEWI 392 (508)
Q Consensus 322 ~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 392 (508)
..... .....++.+++++... ...+++.... -..+|.. .+..+ ..+|+|..++.+.. .+.
T Consensus 304 -----~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~~~~---- 372 (453)
T 2bcg_G 304 -----KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTIIET---- 372 (453)
T ss_dssp -----EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEECCS----
T ss_pred -----cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEecCC----
Confidence 01110 1222223367665311 1122222211 1122322 22233 56788887665533 322
Q ss_pred CCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcH
Q 010539 393 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASM 472 (508)
Q Consensus 393 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~ 472 (508)
.+.++-++.++ ..+.|.. ...+... . .|. +. -...-+|||++|++... ..+
T Consensus 373 -~~~~~~l~~~~---~~l~~~~-------~~~~~~~--~----~~~--~~-------~~~~~~~~~~~~~~~~~---~~~ 423 (453)
T 2bcg_G 373 -DKPHIELEPAF---KLLGPIE-------EKFMGIA--E----LFE--PR-------EDGSKDNIYLSRSYDAS---SHF 423 (453)
T ss_dssp -SCHHHHTHHHH---GGGCSCS-------EEEEEEE--E----EEE--ES-------SCSTTTSEEECCCCCSC---SBS
T ss_pred -CCHHHHHHHHH---HHhhhHH-------Hhhccch--h----eee--ec-------CCCCCCCEEECCCCCcc---ccH
Confidence 12222233333 3343431 1122221 1 111 10 01223789999998887 567
Q ss_pred HHHHHHHHHHHHHHH
Q 010539 473 EGAVLSGKLCAQAIV 487 (508)
Q Consensus 473 ~gA~~sg~~aA~~il 487 (508)
++|+.+++.++++|.
T Consensus 424 ~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 424 ESMTDDVKDIYFRVT 438 (453)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999997
No 27
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.83 E-value=5.4e-19 Score=173.20 Aligned_cols=245 Identities=16% Similarity=0.104 Sum_probs=158.1
Q ss_pred CCCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh-----------------------------------
Q 010539 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP----------------------------------- 97 (508)
Q Consensus 53 ~~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~----------------------------------- 97 (508)
..++.+||+|||+|++|+++|+.|++.|++|+|+|+++..+|...
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~ 95 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKF 95 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCB
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeE
Confidence 345679999999999999999999999999999999998865422
Q ss_pred -----hHHHHHHHcCCCCccccccccceeecCCCC-C----CcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhc
Q 010539 98 -----NIQNLFGELGINDRLQWKEHSMIFAMPNKP-G----EFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIG 167 (508)
Q Consensus 98 -----~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (508)
.+.+++.+.++...+.|......|.+.... + ....+. .|. .....++ ...+.+.++.++..-
T Consensus 96 l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~----VPs---s~~e~~~-~~lLs~~eK~~l~kF 167 (475)
T 3p1w_A 96 ILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHK----VPA---TDMEALV-SPLLSLMEKNRCKNF 167 (475)
T ss_dssp EETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEE----CCC---SHHHHHT-CTTSCHHHHHHHHHH
T ss_pred eecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEe----CCC---CHHHHhh-ccCCCHHHHHHHHHH
Confidence 234556666776666666655544332110 0 000011 121 2344444 467778877765433
Q ss_pred chhhHhcCc---chhh--cccCccHHHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHh---hhccCC
Q 010539 168 LLPAIIGGQ---AYVE--AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QEKHGS 239 (508)
Q Consensus 168 ~~~~~~~~~---~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~ 239 (508)
+........ .... ..+..++.+|+++.++...+.+.+...+.-. ...+..+.+....+..+..++ ....++
T Consensus 168 L~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~-~~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s 246 (475)
T 3p1w_A 168 YQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALY-LNDDYLKQPAYLTLERIKLYMQSISAFGKS 246 (475)
T ss_dssp HHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCC-SSSGGGGSBHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhh-cCCCcccCCHHHHHHHHHHHHHHHhhcCCC
Confidence 322211111 1111 1346799999999998877665332222111 111222345555544443333 223346
Q ss_pred eEEeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 240 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 240 ~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.|+.|| +..+.+.|.+.+++.|++|+++++|++|..++++++++|++.+|+++.||+||+|++..
T Consensus 247 ~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 247 PFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred ceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 78889888 78999999999999999999999999999855677889999999889999999999865
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.80 E-value=5.6e-20 Score=179.47 Aligned_cols=343 Identities=12% Similarity=0.081 Sum_probs=182.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc-CCceEEEeccccCCCCCh------------------------hHHHHHHHcCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLVGAYP------------------------NIQNLFGELGIND 110 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~-g~~V~vlE~~~~~~g~~~------------------------~~~~l~~~lg~~~ 110 (508)
+++||+|||||++||+||+.|+++ |++|+|||+++++||... .+.++++++|+..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 999999999988866532 2334444444311
Q ss_pred ccccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHH-HhhcchhhHhcCcchhhcccCccHHH
Q 010539 111 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 189 (508)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (508)
. +.. ...+.. .+... . .|.....+..++... +. .+.+. .+....... ...+..++.+
T Consensus 86 ~--~~~-~~~~~~---~G~~~--~----~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~~-------~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRH-RVFAMH---NGQAY--Q----FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAEI-------DTADAQNLEE 143 (399)
T ss_dssp C--CCC-CEEEEE---TTEEE--E----ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGGS-------CTTC----CC
T ss_pred c--ccc-ceEEEE---CCEEE--e----CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhcc-------CCCCcccHHH
Confidence 0 000 000000 01100 0 122222233333221 11 22221 111111100 1124578889
Q ss_pred HHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHh--hhccC-CeE-EeecCCccccchHHHHHHHHHcCC
Q 010539 190 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKHG-SKM-AFLDGNPPERLCLPIVEHIQSLGG 265 (508)
Q Consensus 190 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g-~~~-~~~~g~~~~~l~~~l~~~l~~~g~ 265 (508)
|+.+. +...+.+.++.++....|..++++++..+.. .+...+ ...+. ..+ .++.|| ...+++.|++ +.|+
T Consensus 144 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~-~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~ 217 (399)
T 1v0j_A 144 KAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANIT-RLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRI 217 (399)
T ss_dssp HHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCS-CCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTE
T ss_pred HHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhh-cceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCe
Confidence 99884 6777888899999999999999998875431 000000 01111 123 255554 5555555553 3578
Q ss_pred EEEeCceeeEEEEcCCCcEEEEEEcCCcEE-EccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEeccc
Q 010539 266 EVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 344 (508)
Q Consensus 266 ~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i-~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 344 (508)
+|++|++|++|.. . | + ++ .||+||+|+++..+.++. +..+.|.++..+.+.++.+
T Consensus 218 ~I~l~~~V~~I~~-~------v---~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 218 EVRLNTDWFDVRG-Q------L---R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp EEECSCCHHHHHH-H------H---T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred EEEECCchhhhhh-h------h---h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 9999999999963 1 2 1 35 799999999999877762 2356777778888888765
Q ss_pred ccccccccccccC--ccceeeccccccccccc-CCCccEEEEEecCchhhcCCChHHHHHHHHHHHHHhCCCCccccccc
Q 010539 345 LKNTYDHLLFSRS--SLLSVYADMSLTCKEYY-NPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSK 421 (508)
Q Consensus 345 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 421 (508)
.......+.+.+. +...+. ......+... +++..+++..+.. .|. +. .
T Consensus 274 ~~~~~~~~~~~~~~~~~~ri~-~~~~~~~~~~~~~~~~~v~~e~~~--~~~-------------------~~-~------ 324 (399)
T 1v0j_A 274 DFQGTAVMNYNDLDVPYTRIH-EFRHFHPERDYPTDKTVIMREYSR--FAE-------------------DD-D------ 324 (399)
T ss_dssp CSSSSSEEEECCTTSSCSEEE-EGGGGCTTSCCCSSCEEEEEEEEE--ECC-------------------TT-S------
T ss_pred cCCCCeEEEeCCCCCCcceeE-eecCCCCCCcCCCCCeEEEEeecc--ccc-------------------CC-C------
Confidence 4333322323221 112121 1122223332 3344444443321 111 00 0
Q ss_pred ceEEEeeEeecCCceeccCCCCCCC---CCCCCCCC---CceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 010539 422 AKIVKYHVVKTPRSVYKTIPNCEPC---RPLQRSPV---EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 491 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~ 491 (508)
.|. .+.+..+.... ...+..+. +||||||++....| .+|++|+.||+++|++|++...
T Consensus 325 ----------~~~-ypv~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~-~~~e~~i~sa~~~a~~l~~~~~ 388 (399)
T 1v0j_A 325 ----------EPY-YPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQY-LDMHMAIASALNMYDNVLAPHL 388 (399)
T ss_dssp ----------CCC-EECCCHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHTCC-CCHHHHHHHHHHHHHHTHHHHH
T ss_pred ----------ccc-cccCcHHHHHHHHHHHHHHHhccccCCEEEccceEEEEe-cCHHHHHHHHHHHHHHHhhhhh
Confidence 000 00000000000 00011123 68999999877665 6999999999999999986543
No 29
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.80 E-value=1.4e-17 Score=164.27 Aligned_cols=364 Identities=13% Similarity=0.136 Sum_probs=189.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCChhH------------------------------------
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNI------------------------------------ 99 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~~~------------------------------------ 99 (508)
..+||+|||||++|+++|+.|++.|++|+|+|+++..+|....+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 56899999999999999999999999999999999887764322
Q ss_pred -----HHHHHHcCCCCccccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHH---Hhhcchhh
Q 010539 100 -----QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK---FAIGLLPA 171 (508)
Q Consensus 100 -----~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 171 (508)
.++++++|+...+.+...+..+.+. .+.. +.+ +... ...+.. .+....++.. +......
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~--~~~----p~~~---~~~~~~-~l~~~~~~~~~~~~~~~~~~- 151 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKI--YKV----PSTE---TEALAS-NLMGMFEKRRFRKFLVFVAN- 151 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEE--EEC----CCSH---HHHHHC-SSSCHHHHHHHHHHHHHHHH-
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEee--CCEE--EEC----CCCH---HHHhhC-cccChhhHHHHHHHHHHHHh-
Confidence 2444555544333333322222111 1110 111 1110 011111 1111211111 1100000
Q ss_pred HhcCcc---hhhcccCccHHHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhh--ccC-CeEEeec
Q 010539 172 IIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE--KHG-SKMAFLD 245 (508)
Q Consensus 172 ~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~~~ 245 (508)
+....+ ........++.+|+++.+....+.. ++..........++.+.+....+..+..+... .+| +.+.++.
T Consensus 152 ~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~ 230 (433)
T 1d5t_A 152 FDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPL 230 (433)
T ss_dssp CCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEET
T ss_pred hcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeC
Confidence 000000 0012356799999998876655433 22221111111223333433333322222221 122 3466777
Q ss_pred CCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHH
Q 010539 246 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 325 (508)
Q Consensus 246 g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~ 325 (508)
|| +..+++.|.+.+++.|++|+++++|++|.. +++.+++|.+ +|+++.||+||+|+|++.. .+..
T Consensus 231 gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~--~~~~---------- 295 (433)
T 1d5t_A 231 YG-LGELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKS-EGEVARCKQLICDPSYVPD--RVRK---------- 295 (433)
T ss_dssp TC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEE-TTEEEECSEEEECGGGCGG--GEEE----------
T ss_pred cC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEEE-CCeEEECCEEEECCCCCcc--cccc----------
Confidence 77 789999999999999999999999999997 4566666665 6778999999999998742 1110
Q ss_pred HhhcCCcCEEEEEEEecccccc----cccccccccCc---cceeec-ccccccccccCCCccEEEEEe-cCchhhcCCCh
Q 010539 326 LEKLVGVPVINIHIWFDRKLKN----TYDHLLFSRSS---LLSVYA-DMSLTCKEYYNPNQSMLELVF-APAEEWISCSD 396 (508)
Q Consensus 326 ~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 396 (508)
+.. ....+. .+++++.. ....+++.... -..+|. ..+ .++..+|+|..++.+.. .+.. +.
T Consensus 296 ---~~~-~~~~~~-il~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s-~d~~~aP~G~~~~~~~~~~p~~-----~~ 364 (433)
T 1d5t_A 296 ---AGQ-VIRIIC-ILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMIS-YAHNVAAQGKYIAIASTTVETT-----DP 364 (433)
T ss_dssp ---EEE-EEEEEE-EESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEE-GGGTSSCTTCEEEEEEEECCSS-----CH
T ss_pred ---cCc-ceeEEE-EEcCcccccCCCceEEEEeCccccCCCCCEEEEEEC-CCCcccCCCCEEEEEEEecCCC-----CH
Confidence 110 111222 36665532 11222222211 012222 233 66778888887765432 3321 22
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHH
Q 010539 397 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAV 476 (508)
Q Consensus 397 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~ 476 (508)
++-++.. +..+.|.. ...+.... .+. +. -...-+|||+++++-.. ..+|+++
T Consensus 365 ~~~l~~~---~~~l~~~~-------~~~~~~~~------~~~--~~-------~~~~~~~~~~~~~~d~~---~~~e~~~ 416 (433)
T 1d5t_A 365 EKEVEPA---LGLLEPID-------QKFVAISD------LYE--PI-------DDGSESQVFCSCSYDAT---THFETTC 416 (433)
T ss_dssp HHHTHHH---HTTTCSCS-------EEEEEEEE------EEE--ES-------CCSTTTCEEECCCCCSC---SBSHHHH
T ss_pred HHHHHHH---HHHhhhHH-------hheeccce------eee--ec-------CCCCCCCEEECCCCCcc---ccHHHHH
Confidence 2222333 33333331 11222221 111 10 01223689999987776 4569999
Q ss_pred HHHHHHHHHHH
Q 010539 477 LSGKLCAQAIV 487 (508)
Q Consensus 477 ~sg~~aA~~il 487 (508)
.+++..-++|.
T Consensus 417 ~~~~~~~~~~~ 427 (433)
T 1d5t_A 417 NDIKDIYKRMA 427 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88887777664
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.79 E-value=1.9e-18 Score=167.44 Aligned_cols=229 Identities=17% Similarity=0.182 Sum_probs=137.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC------------------------hhHHHHHHHcCCCCcc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY------------------------PNIQNLFGELGINDRL 112 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~------------------------~~~~~l~~~lg~~~~~ 112 (508)
++||+|||||++|+++|+.|+++|++|+|+|++++++|.. +.+.+++++++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999998886542 233444555443110
Q ss_pred ccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHH
Q 010539 113 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 192 (508)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (508)
+.. ...... .+.. +. .|.....+..++... +...+..+.+..... . . ..+..++.+|+.
T Consensus 82 -~~~-~~~~~~---~g~~--~~----~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~----~--~--~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVN-RVKATV---NGQV--FS----LPINLHTINQFFSKT--CSPDEARALIAEKGD----S--T--IADPQTFEEEAL 140 (384)
T ss_dssp -CCC-CEEEEE---TTEE--EE----ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSC----C--S--CSSCCBHHHHHH
T ss_pred -ccc-ceEEEE---CCEE--EE----CCCChhHHHHHhccc--CCHHHHHHHHHHhhh----c--c--CCCCcCHHHHHH
Confidence 000 000000 0100 00 122222333332211 111111111111111 0 0 235679999998
Q ss_pred HcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHH-H-hh-hccCCeEE-eecCCccccchHHHHHHHHHcCCEEE
Q 010539 193 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR-F-LQ-EKHGSKMA-FLDGNPPERLCLPIVEHIQSLGGEVR 268 (508)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~g~~~~-~~~g~~~~~l~~~l~~~l~~~g~~i~ 268 (508)
+. +...+.+.++.++....|..++++++..... .+.. + .. ......+. ++.|| ...+++.|++ +.|++|+
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~-r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~ 214 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILK-RLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVD 214 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCC-SCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHh-ccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEE
Confidence 87 7788889999999999999999999875421 0000 0 00 11122332 66655 5566555553 3578999
Q ss_pred eCceee-EEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEec
Q 010539 269 LNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD 342 (508)
Q Consensus 269 ~~~~V~-~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 342 (508)
++++|+ +|.. .+|+||+|+++..+..++ +..+.|.+...+.+.+|
T Consensus 215 l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 215 LQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEE
T ss_pred ECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeC
Confidence 999999 7852 199999999999887762 22467777777888887
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.79 E-value=7.3e-19 Score=169.47 Aligned_cols=233 Identities=15% Similarity=0.122 Sum_probs=139.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC----------------------hhHHHHHHHcCCCCccccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY----------------------PNIQNLFGELGINDRLQWK 115 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~----------------------~~~~~l~~~lg~~~~~~~~ 115 (508)
+||+|||||++||+||++|+++|++|+|+|++++++|.. +.+.+++++++.... +.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~--~~ 79 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR--FT 79 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--CC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCCHHHHHHHHHhhhhhh--cc
Confidence 699999999999999999999999999999998876642 233444444443111 00
Q ss_pred cccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHHHcC
Q 010539 116 EHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQG 195 (508)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (508)
... .... .+.. +. .|.....+..++... ...+...++...... ....+..++.+|+.+.
T Consensus 80 ~~~-~~~~---~g~~--~~----~p~~~~~~~~l~~~~---~~~~~~~~l~~~~~~-------~~~~~~~s~~~~~~~~- 138 (367)
T 1i8t_A 80 NSP-LAIY---KDKL--FN----LPFNMNTFHQMWGVK---DPQEAQNIINAQKKK-------YGDKVPENLEEQAISL- 138 (367)
T ss_dssp CCC-EEEE---TTEE--EE----SSBSHHHHHHHHCCC---CHHHHHHHHHHHTTT-------TCCCCCCSHHHHHHHH-
T ss_pred ccc-eEEE---CCeE--EE----cCCCHHHHHHHhccC---CHHHHHHHHHHHhhc-------cCCCCCccHHHHHHHH-
Confidence 000 0000 0110 01 122223333333221 111111111111110 1123567999999887
Q ss_pred CChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHh--hhcc-CCeE-EeecCCccccchHHHHHHHHHcCCEEEeCc
Q 010539 196 VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRLNS 271 (508)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~-~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~ 271 (508)
+...+.+.++.++...+|+.++++++..+.. .+.... ...+ ...+ .++.|| ...+++.|+ + |++|++|+
T Consensus 139 ~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~-~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~----~-g~~i~l~~ 211 (367)
T 1i8t_A 139 VGEDLYQALIKGYTEKQWGRSAKELPAFIIK-RIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKML----E-GVDVKLGI 211 (367)
T ss_dssp HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSC-CCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHH----T-TSEEECSC
T ss_pred HhHHHHHHHHHHHHhhhhCCChHHcCHHHHh-hceeeeccccccccchhhcccCCC-HHHHHHHHh----c-CCEEEeCC
Confidence 7778888999999999999999999875431 000000 0111 1223 256655 555555554 3 68999999
Q ss_pred eeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEecccc
Q 010539 272 RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKL 345 (508)
Q Consensus 272 ~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 345 (508)
+|++|.. . | ++.+|+||+|+++..+..+. +.++.|.+...+.+.++++.
T Consensus 212 ~V~~i~~---~----v------~~~~D~VV~a~p~~~~~~~~------------l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 212 DFLKDKD---S----L------ASKAHRIIYTGPIDQYFDYR------------FGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp CGGGSHH---H----H------HTTEEEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSSC
T ss_pred ceeeech---h----h------hccCCEEEEeccHHHHHHHh------------hCCCCCceEEEEEEEecccc
Confidence 9998862 1 2 14689999999998766441 33567778888888888764
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.72 E-value=7.5e-16 Score=151.43 Aligned_cols=201 Identities=13% Similarity=0.165 Sum_probs=109.0
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH--hhhcCcchhccHHHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL--KLQLPENWKEMAYFKR 325 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~--~~ll~~~~~~~~~~~~ 325 (508)
++..+...|.+.+++.|++|+++++|++|.. +++.+++|.+.+| ++.||.||+|+|.+.- ...++..
T Consensus 172 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~--------- 240 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFE--------- 240 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCC---------
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCC---------
Confidence 4668889999999999999999999999997 4556677888888 6999999999998752 2222111
Q ss_pred HhhcCCcCEEEEEEEecccccccccccccccCccceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHH
Q 010539 326 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMK 405 (508)
Q Consensus 326 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (508)
+...+.....+.++ +........++... ...|.. + .+++..++.....+........+++..+.+++
T Consensus 241 ---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~y~~-----p--~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~ 307 (405)
T 2gag_B 241 ---LPIQSHPLQALVSE-LFEPVHPTVVMSNH--IHVYVS-----Q--AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMA 307 (405)
T ss_dssp ---CCEEEEEEEEEEEE-EBCSCCCSEEEETT--TTEEEE-----E--CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHH
T ss_pred ---CCccccceeEEEec-CCccccCceEEeCC--CcEEEE-----E--cCCCcEEEEeccCCCCccccCCCHHHHHHHHH
Confidence 01111111122222 22111111111110 011110 0 12233333332221112222344667788999
Q ss_pred HHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHH
Q 010539 406 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 485 (508)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~ 485 (508)
.+.+++|...... +. ..| .+...+.++.....- ..+.+|+|++..+.. .|+.-|...|+.+|+.
T Consensus 308 ~~~~~~p~l~~~~-----~~-~~w----~g~~~~t~d~~p~ig--~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~ 371 (405)
T 2gag_B 308 AAVELFPIFARAH-----VL-RTW----GGIVDTTMDASPIIS--KTPIQNLYVNCGWGT----GGFKGTPGAGFTLAHT 371 (405)
T ss_dssp HHHHHCGGGGGCE-----EC-EEE----EEEEEEETTSCCEEE--ECSSBTEEEEECCGG----GCSTTHHHHHHHHHHH
T ss_pred HHHHhCCccccCC-----cc-eEE----eeccccCCCCCCEec--ccCCCCEEEEecCCC----chhhHHHHHHHHHHHH
Confidence 9999998643211 11 111 122222222111000 112578998876554 3667788899999998
Q ss_pred HHH
Q 010539 486 IVQ 488 (508)
Q Consensus 486 il~ 488 (508)
|..
T Consensus 372 i~g 374 (405)
T 2gag_B 372 IAN 374 (405)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.72 E-value=1.9e-16 Score=152.27 Aligned_cols=334 Identities=15% Similarity=0.181 Sum_probs=185.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh-----------------------hHHHHHHHcCCCCc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP-----------------------NIQNLFGELGINDR 111 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~-----------------------~~~~l~~~lg~~~~ 111 (508)
...+||+|||||++||+||++|+++|++|+|+|++++++|... .+.+++++++....
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 106 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWRP 106 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEEE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhccc
Confidence 4678999999999999999999999999999999988866432 33445555542110
Q ss_pred cccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHH
Q 010539 112 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 191 (508)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (508)
+ ........ .+.+.. +|.....+..++.. .........++. . ......+.+++.+|+
T Consensus 107 --~-~~~~~~~~---~g~l~~------lP~~~~~~~~l~~~--~~~~~~~~~~l~----~-----~~~~~~~~~s~~e~~ 163 (397)
T 3hdq_A 107 --Y-QHRVLASV---DGQLLP------IPINLDTVNRLYGL--NLTSFQVEEFFA----S-----VAEKVEQVRTSEDVV 163 (397)
T ss_dssp --C-CCBEEEEE---TTEEEE------ESCCHHHHHHHHTC--CCCHHHHHHHHH----H-----HCCCCSSCCBHHHHH
T ss_pred --c-cccceEEE---CCEEEE------cCCChHHHHHhhcc--CCCHHHHHHHHh----h-----cccCCCCCcCHHHHH
Confidence 0 00000000 111111 12222223333321 111111111111 0 011124578999999
Q ss_pred HHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhh--hc-cCCeE-EeecCCccccchHHHHHHHHHcCCEE
Q 010539 192 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGEV 267 (508)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~g~~~-~~~~g~~~~~l~~~l~~~l~~~g~~i 267 (508)
.+. ++..+.+.++.++..+.|+.+++++++.+.. .+..... .. +...+ .++.+| ...+++.|+ +..|++|
T Consensus 164 ~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l~---~~~g~~V 237 (397)
T 3hdq_A 164 VSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHG-YTRMFQNML---SSPNIKV 237 (397)
T ss_dssp HHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTC-HHHHHHHHT---CSTTEEE
T ss_pred HHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCC-HHHHHHHHH---hccCCEE
Confidence 876 6778889999999999999999999975331 1110000 00 11122 245555 445555543 3458999
Q ss_pred EeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEecccccc
Q 010539 268 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN 347 (508)
Q Consensus 268 ~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 347 (508)
++|++|+++ +.++.+|+||+|+|+..+-.. .+..+.|.+...+.+.++.+...
T Consensus 238 ~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~~~~ 290 (397)
T 3hdq_A 238 MLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTEQLL 290 (397)
T ss_dssp EESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCSC
T ss_pred EECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccccCC
Confidence 999999832 223569999999998766322 13356777888888889865533
Q ss_pred cccccccccCccceeecccccccccccCCCccEEEEEecC--chhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEE
Q 010539 348 TYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 425 (508)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 425 (508)
....+.+.+......+...++. +.. +.+.++++.-+.. .+..=...+++-.+... ...+.
T Consensus 291 ~~~~vn~~d~~p~tRi~e~k~~-~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~-~y~~~--------------- 352 (397)
T 3hdq_A 291 PTGTVNYPNDYAYTRVSEFKHI-TGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYK-KYEAL--------------- 352 (397)
T ss_dssp SSSEEECSSSSSCSEEEEHHHH-HCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHH-HHHHH---------------
T ss_pred CCeEEEeCCCCcceEEEeeccc-CCC-CCCCEEEEEEECCCCCccccccCchhHHHHHH-HHHHH---------------
Confidence 3333334332233332222222 122 2345555543221 00000011111000000 00000
Q ss_pred EeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHH
Q 010539 426 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 488 (508)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~ 488 (508)
....+||+|+|......|+ .|+.++.+|..++++++.
T Consensus 353 -------------------------a~~~~~v~~~GRlg~y~Y~-~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 353 -------------------------ADAAQDVTFVGRLATYRYY-NMDQVVAQALATFRRLQG 389 (397)
T ss_dssp -------------------------HHHCTTEEECSTTTTTCCC-CHHHHHHHHHHHHHHHHC
T ss_pred -------------------------HhcCCCEEEcccceEEEec-cHHHHHHHHHHHHHHHhc
Confidence 0113589999999888874 999999999999998865
No 34
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.71 E-value=2.5e-15 Score=149.18 Aligned_cols=65 Identities=12% Similarity=0.178 Sum_probs=55.7
Q ss_pred ccccchHHHHHHHHHcCCEEEeCc---eeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcC
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 314 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~---~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~ 314 (508)
++..++..|.+.+++.|++|++++ +|++|.. +++.+++|++.+|+++.||.||+|+|.+.- .|++
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~-~l~~ 226 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASAG-QFLD 226 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGGG-GTSC
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCChh-hhcC
Confidence 467889999999999999999999 9999997 456677799999978999999999999863 4443
No 35
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=3.9e-15 Score=149.13 Aligned_cols=58 Identities=28% Similarity=0.490 Sum_probs=50.9
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
..+.+.|.+.+++.|++|+++++|++|.. +++.+++|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 46777888889999999999999999997 45667789999998899999999999875
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.68 E-value=2.8e-15 Score=146.04 Aligned_cols=205 Identities=13% Similarity=0.141 Sum_probs=111.6
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHh--hhcCcchhccHHHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK--LQLPENWKEMAYFKR 325 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~--~ll~~~~~~~~~~~~ 325 (508)
++..+...|.+.+++.|++|+++++|++|..+ ++.+++|++.+| +++||.||+|+|.+... ..++...
T Consensus 147 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~-------- 216 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT-------- 216 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS--------
T ss_pred CHHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc--------
Confidence 46788999999999999999999999999974 556666888877 79999999999998532 2221110
Q ss_pred HhhcCCcCEEEEEEEeccccccccc-ccccccCccceeecccccccccccCCCccEEEEE-ecCchhhcCCChHHHHHHH
Q 010539 326 LEKLVGVPVINIHIWFDRKLKNTYD-HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDSEIIDAT 403 (508)
Q Consensus 326 ~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 403 (508)
.+...+.....+.++. ...... ..++... ....|+. + .+++ .++... ......+....+++..+.+
T Consensus 217 --~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~-~~~~y~~-----p--~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l 284 (382)
T 1y56_B 217 --KIPIEPYKHQAVITQP-IKRGTINPMVISFK-YGHAYLT-----Q--TFHG-GIIGGIGYEIGPTYDLTPTYEFLREV 284 (382)
T ss_dssp --CCCCEEEEEEEEEECC-CSTTSSCSEEEEST-TTTEEEE-----C--CSSS-CCEEECSCCBSSCCCCCCCHHHHHHH
T ss_pred --CcCCCeeEeEEEEEcc-CCcccCCCeEEecC-CCeEEEE-----E--eCCe-EEEecCCCCCCCCCCCCCCHHHHHHH
Confidence 0111122222333332 211111 1111110 0111111 0 1223 222210 1111122233456778889
Q ss_pred HHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHH
Q 010539 404 MKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCA 483 (508)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA 483 (508)
++.+.+++|..... .+. ..| .+.....+...... ......+|+|++..+.. .|+.-|...|+..|
T Consensus 285 ~~~~~~~~p~l~~~-----~~~-~~~----~g~r~~t~d~~p~i-g~~~~~~~~~~~~G~~g----~G~~~a~~~g~~la 349 (382)
T 1y56_B 285 SYYFTKIIPALKNL-----LIL-RTW----AGYYAKTPDSNPAI-GRIEELNDYYIAAGFSG----HGFMMAPAVGEMVA 349 (382)
T ss_dssp HHHHHHHCGGGGGS-----EEE-EEE----EEEEEECTTSCCEE-EEESSSBTEEEEECCTT----CHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcCCC-----Cce-EEE----EeccccCCCCCcEe-ccCCCCCCEEEEEecCc----chHhhhHHHHHHHH
Confidence 99999999864321 121 111 12222222211100 00122578999876554 48888999999999
Q ss_pred HHHHHH
Q 010539 484 QAIVQD 489 (508)
Q Consensus 484 ~~il~~ 489 (508)
+.|+..
T Consensus 350 ~~i~~~ 355 (382)
T 1y56_B 350 ELITKG 355 (382)
T ss_dssp HHHHHS
T ss_pred HHHhCC
Confidence 988753
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.68 E-value=1.4e-16 Score=154.45 Aligned_cols=61 Identities=10% Similarity=0.098 Sum_probs=51.5
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC--cEEEccEEEEccChHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDIL 309 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g--~~i~ad~VI~A~~~~~~ 309 (508)
++..+...|.+.+++.|++|+++++|++|..++++. +.|.+.+| .++.||.||+|+|.+..
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGG-FELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSS-EEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCce-EEEEECCCceeEEEeCEEEECCCcchH
Confidence 467899999999999999999999999999854443 35888877 47999999999999853
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.65 E-value=1.4e-13 Score=143.82 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=51.3
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
++..++..|.+.+++.|++|+++++|++|..++++ +.|.+.+|.++.||.||+|+|.+.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC--WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe--EEEEECCCCEEECCEEEECCCcch
Confidence 46789999999999999999999999999985443 468888877899999999999984
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.64 E-value=1.4e-13 Score=143.79 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=50.4
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCc-EEEccEEEEccChHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDI 308 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~-~i~ad~VI~A~~~~~ 308 (508)
++..++..|.+.+++.|++|+++++|++|..++++ +.|.+.+|+ ++.||.||+|+|.+.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch
Confidence 46789999999999999999999999999985444 368888876 799999999999984
No 40
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.63 E-value=5.2e-14 Score=137.77 Aligned_cols=59 Identities=17% Similarity=0.168 Sum_probs=48.7
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
++..+...|.+.+++.|++|+++++|++|..++++ + .|.+.+| +++||.||+|+|.+..
T Consensus 151 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v-~v~t~~g-~i~a~~VV~A~G~~s~ 209 (397)
T 2oln_A 151 DVRGTLAALFTLAQAAGATLRAGETVTELVPDADG-V-SVTTDRG-TYRAGKVVLACGPYTN 209 (397)
T ss_dssp EHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEESSC-EEEEEEEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-E-EEEECCC-EEEcCEEEEcCCcChH
Confidence 35678889999999999999999999999974433 3 4777766 6999999999998743
No 41
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.63 E-value=1.7e-14 Score=140.46 Aligned_cols=200 Identities=14% Similarity=0.128 Sum_probs=109.5
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHh
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 327 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~ 327 (508)
++..+...|.+.+++.|++|+++++|++|..+ ++.+ .|.+.+| ++.||.||+|+|.+... +++....
T Consensus 162 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~~-l~~~~~~--------- 228 (382)
T 1ryi_A 162 EPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSGM-FFKQLGL--------- 228 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTHH-HHHHTTC---------
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHHH-HHHhcCC---------
Confidence 35788999999999999999999999999874 4444 6888777 79999999999997532 2211100
Q ss_pred hcCCcCEEEEEEEecccccccccccccccCccceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHH
Q 010539 328 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKEL 407 (508)
Q Consensus 328 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 407 (508)
.+...+.....+.++.+. ......++.+ ..|. .+ .+++..+++... ....+....+++..+.+++.+
T Consensus 229 ~~~~~~~~g~~~~~~~~~-~~~~~~~~~~----~~~~-----~p--~~~g~~~vG~~~-~~~~~~~~~~~~~~~~l~~~~ 295 (382)
T 1ryi_A 229 NNAFLPVKGECLSVWNDD-IPLTKTLYHD----HCYI-----VP--RKSGRLVVGATM-KPGDWSETPDLGGLESVMKKA 295 (382)
T ss_dssp CCCCEEEEEEEEEEECCS-SCCCSEEEET----TEEE-----EE--CTTSEEEEECCC-EETCCCCSCCHHHHHHHHHHH
T ss_pred CCceeccceEEEEECCCC-CCccceEEcC----CEEE-----EE--cCCCeEEEeecc-cccCCCCCCCHHHHHHHHHHH
Confidence 011123333344444321 1111111111 0111 01 112222222111 112233344567788999999
Q ss_pred HHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHH
Q 010539 408 AKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 487 (508)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il 487 (508)
.+++|..... .+. ..| .+...+.+...... ......+|+|+++.+.. .|+..|..+|+.+|+.|+
T Consensus 296 ~~~~p~l~~~-----~~~-~~w----~g~~~~t~d~~p~i-g~~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 296 KTMLPAIQNM-----KVD-RFW----AGLRPGTKDGKPYI-GRHPEDSRILFAAGHFR----NGILLAPATGALISDLIM 360 (382)
T ss_dssp HHHCGGGGGS-----EEE-EEE----EEEEEECSSSCCEE-EEETTEEEEEEEECCSS----CTTTTHHHHHHHHHHHHT
T ss_pred HHhCCCcCCC-----cee-eEE----EEecccCCCCCcEe-ccCCCcCCEEEEEcCCc----chHHHhHHHHHHHHHHHh
Confidence 9999864321 111 111 12222222211100 00112568999887654 477888999999999886
Q ss_pred H
Q 010539 488 Q 488 (508)
Q Consensus 488 ~ 488 (508)
.
T Consensus 361 ~ 361 (382)
T 1ryi_A 361 N 361 (382)
T ss_dssp T
T ss_pred C
Confidence 5
No 42
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.63 E-value=1.1e-14 Score=141.71 Aligned_cols=59 Identities=17% Similarity=0.056 Sum_probs=51.2
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
++..++..|.+.+++.|++|+++++|++|..+++ . +.|++.+| ++.||+||+|+|.+.-
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhHH
Confidence 4788999999999999999999999999997443 3 56888888 7999999999999863
No 43
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.63 E-value=3.5e-14 Score=139.02 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=45.4
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE-cCC--cEEEccEEEEccChHH-Hhhhc
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNG--NVIDGDAYVFATPVDI-LKLQL 313 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~-~~g--~~i~ad~VI~A~~~~~-~~~ll 313 (508)
.+-..|.+.+++.|++++++++|+.+.. +++.++++.. .++ .+++||.||-|.|.+. +++.+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 4555677888889999999999999987 4555545543 233 3589999999999864 34443
No 44
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.62 E-value=1.8e-14 Score=140.65 Aligned_cols=204 Identities=11% Similarity=0.025 Sum_probs=108.7
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHh
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 327 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~ 327 (508)
++.+++..|.+.+++.|++|+++++|++|+.++++ +.|.+.+| ++.||.||+|+|.+.- .+++....
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~-~l~~~~g~--------- 214 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNS-KLLSKLNL--------- 214 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHH-HHGGGGTE---------
T ss_pred eHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHH-HHhhhhcc---------
Confidence 35788999999999999999999999999975444 34777766 6999999999999863 34332110
Q ss_pred hcCCcCEEEEEEEecccc--cc---cccccccccCccceeecccccccccccCCC-ccEEEEEecC----chhhcCCC--
Q 010539 328 KLVGVPVINIHIWFDRKL--KN---TYDHLLFSRSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP----AEEWISCS-- 395 (508)
Q Consensus 328 ~~~~~~~~~v~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~-- 395 (508)
.+...+.....+.++.+. +. ....++... .....|.. + .+++ ..+++....+ ...+....
T Consensus 215 ~~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~y~~-----p--~~~g~~~~iG~~~~~~~~~~~~~~~~~~~ 286 (389)
T 2gf3_A 215 DIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEV-PNGIYYGF-----P--SFGGCGLKLGYHTFGQKIDPDTINREFGV 286 (389)
T ss_dssp ECCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEE-TTEEEEEE-----C--BSTTCCEEEEESSCCEECCTTTCCCCTTS
T ss_pred CCceEEEEEEEEEEecCcccccccccCCEEEEeC-CCCcEEEc-----C--CCCCCcEEEEEcCCCCccCcccccCccCC
Confidence 011223334444454321 00 000000000 00011110 1 1122 2233221111 11111222
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHH
Q 010539 396 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGA 475 (508)
Q Consensus 396 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA 475 (508)
.++..+.+++.+.+++|.... .+.. .| .+.....+...... ......+|||++..+.. .|+.-|
T Consensus 287 ~~~~~~~l~~~~~~~~P~l~~------~~~~-~w----~g~r~~t~D~~p~i-g~~~~~~~l~~a~G~~g----~G~~~a 350 (389)
T 2gf3_A 287 YPEDESNLRAFLEEYMPGANG------ELKR-GA----VCMYTKTLDEHFII-DLHPEHSNVVIAAGFSG----HGFKFS 350 (389)
T ss_dssp SHHHHHHHHHHHHHHCGGGCS------CEEE-EE----EEEEEECTTSCCEE-EEETTEEEEEEEECCTT----CCGGGH
T ss_pred CHHHHHHHHHHHHHhCCCCCC------CceE-EE----EEEeccCCCCCeEE-ccCCCCCCEEEEECCcc----cccccc
Confidence 445568999999999986432 1211 11 22222333211100 00112578999886655 367778
Q ss_pred HHHHHHHHHHHHH
Q 010539 476 VLSGKLCAQAIVQ 488 (508)
Q Consensus 476 ~~sg~~aA~~il~ 488 (508)
...|+..|+.|+.
T Consensus 351 p~~g~~la~~i~~ 363 (389)
T 2gf3_A 351 SGVGEVLSQLALT 363 (389)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC
Confidence 8899999988875
No 45
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.61 E-value=1.6e-13 Score=128.23 Aligned_cols=39 Identities=36% Similarity=0.548 Sum_probs=36.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
++||+|||||++||+||+.|+++|++|+|||+++.++|.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 479999999999999999999999999999999988765
No 46
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.60 E-value=1.1e-13 Score=136.58 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=52.6
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCc--EEEccEEEEccChHH-HhhhcC
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVDI-LKLQLP 314 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~--~i~ad~VI~A~~~~~-~~~ll~ 314 (508)
+..+...|.+.+++.|++|+.+++|++|..++++.++.|.+.+|+ +++||.||.|+|.+. ++++++
T Consensus 105 r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 105 RGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 456677788888888999999999999998656655667778887 699999999999864 344443
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.58 E-value=1.8e-14 Score=143.36 Aligned_cols=61 Identities=21% Similarity=0.230 Sum_probs=51.5
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEc--------------CCCcEEEEEEcCCcEE--EccEEEEccChHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDIL 309 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--------------~~g~~~~V~~~~g~~i--~ad~VI~A~~~~~~ 309 (508)
++.+++..|.+.+++.|++|+++++|++|..+ +++.+++|.+.+| ++ .||.||+|+|.+..
T Consensus 179 ~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 46789999999999999999999999999862 2445667888888 58 99999999999853
No 48
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.58 E-value=6.9e-15 Score=144.48 Aligned_cols=55 Identities=22% Similarity=0.322 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
..+.+.|.+.+.+ ++|+++++|++|+.++++ +.|++.+|+++.||.||.|.|.+.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECCCcCh
Confidence 4566667777765 899999999999985443 348888998999999999999863
No 49
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.57 E-value=1.8e-11 Score=123.46 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=123.8
Q ss_pred HHHHhcCCCCChHHHHHHhhcchhhHh--cCcchhhcccCccHHHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHH
Q 010539 147 LAILRNNEMLTWPEKVKFAIGLLPAII--GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQC 224 (508)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (508)
..++.. ..+.+.++..+..-+..... .........+..++.+|+++.+....+...+.. .. .. ......+...
T Consensus 276 ~eif~s-~~Lsl~EKr~L~kFl~~~~~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~-~l-al--~~~~~~pa~~ 350 (650)
T 1vg0_A 276 ADVFNS-KQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLH-SI-AM--TSETTSCTVD 350 (650)
T ss_dssp HHHHHC-SSSCHHHHHHHHHHHHHHHTGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHH-HT-TC----CCSCBHHH
T ss_pred HHHHhC-cCCCHHHHHHHHHHHHHHHHhccChHHHhhhccCCHHHHHHHhCCCHHHHHHHHH-HH-hc--cCCCCCchhH
Confidence 334443 66666666554432111111 111122345688999999998777665443322 11 11 1222234444
Q ss_pred HHHHHHHHh---hhccCCeEEeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCC-CcEEEEEEcCCcEEEccEE
Q 010539 225 ILIALNRFL---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAY 300 (508)
Q Consensus 225 ~~~~~~~~~---~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~-g~~~~V~~~~g~~i~ad~V 300 (508)
.+..+..++ ....++.+.++.|| .+.|.++|.+.++..|++|+++++|.+|..+++ |++++|.+.+|++++||.|
T Consensus 351 ~l~~i~~~l~sl~~yg~sg~~yp~GG-~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~V 429 (650)
T 1vg0_A 351 GLKATKKFLQCLGRYGNTPFLFPLYG-QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHF 429 (650)
T ss_dssp HHHHHHHHHHHTTSSSSSSEEEETTC-TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEE
T ss_pred HHHHHHHHHHHHHhhccCceEEeCCc-hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEE
Confidence 433233332 22222467788887 899999999999999999999999999998543 7788888888999999999
Q ss_pred EEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEeccccccccc----c-cccccC--ccceeecccccccccc
Q 010539 301 VFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD----H-LLFSRS--SLLSVYADMSLTCKEY 373 (508)
Q Consensus 301 I~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~-~~~~~~--~~~~~~~~~~~~~~~~ 373 (508)
|+... . ++.... ..+.+..+.++.+.++++....-. . +++... .-..+|..........
T Consensus 430 Vs~~~-~-----lp~~~~--------~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~~g~~~~V~i~~~Ss~~~~ 495 (650)
T 1vg0_A 430 IIEDS-Y-----LSENTC--------SRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSSTMT 495 (650)
T ss_dssp EEEGG-G-----BCTTTT--------TTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECCSSTTSCCEEEEEECGGGTS
T ss_pred EEChh-h-----cCHhHh--------ccccccceEEEEEEecCCCCCcCCCcceEEEEccCccCCCCCEEEEEeCCCCCC
Confidence 98322 1 222211 112334577778888887642211 1 111111 0111222111225567
Q ss_pred cCCCccEEEEEe
Q 010539 374 YNPNQSMLELVF 385 (508)
Q Consensus 374 ~~~~~~~~~~~~ 385 (508)
.|+|..++.+..
T Consensus 496 cP~G~~Vv~lst 507 (650)
T 1vg0_A 496 CMKGTYLVHLTC 507 (650)
T ss_dssp SCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 788888776543
No 50
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.56 E-value=8.6e-14 Score=135.00 Aligned_cols=63 Identities=19% Similarity=0.206 Sum_probs=51.8
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcC
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 314 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~ 314 (508)
+|.+++..|.+.+++.|++|+++++|++|..++++ +.|.+.+| ++.||.||+|+|.+. ..|++
T Consensus 147 ~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 147 RSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGG-GGTST
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccH-Hhhcc
Confidence 36788999999999999999999999999974443 35788888 599999999999986 34444
No 51
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.55 E-value=3e-13 Score=137.74 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=48.0
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc-CC--cEEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~-~g--~~i~ad~VI~A~~~~~ 308 (508)
...+...|.+.+++.|++|+.+++|++|..+ ++.++.|++. +| .++.||.||.|+|.+.
T Consensus 127 r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 127 REEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 3466677888888899999999999999974 4455667776 66 5799999999999865
No 52
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.54 E-value=6.3e-13 Score=130.09 Aligned_cols=59 Identities=10% Similarity=0.105 Sum_probs=47.1
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE---cCCcEEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~~i~ad~VI~A~~~~~ 308 (508)
...+...|.+.+++.|++|+.+++|++|..+ ++.+++|++ .++.++.||.||.|+|.+.
T Consensus 101 ~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 101 RDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 3456677888888899999999999999974 566655666 3456799999999999864
No 53
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.53 E-value=3.6e-13 Score=136.85 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=49.2
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE--cCC-cEEEccEEEEccChH-HHhhhcC
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVD-ILKLQLP 314 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~--~~g-~~i~ad~VI~A~~~~-~~~~ll~ 314 (508)
..+...|.+.+++.|++|+++++|++|+.++++.. |++ .+| ++++||.||.|.|.+ .++++++
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~--v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE--VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE--EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE--EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 45666788888888999999999999997555543 555 677 689999999999986 4455554
No 54
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.53 E-value=3.5e-13 Score=136.93 Aligned_cols=60 Identities=20% Similarity=0.195 Sum_probs=51.4
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC---C--cEEEccEEEEccChHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 308 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~---g--~~i~ad~VI~A~~~~~ 308 (508)
++.+++..|.+.++++|++|+++++|++|.. +++.+++|++.+ | .+++||.||+|+|+++
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 5788999999999999999999999999998 456677787754 3 4699999999999986
No 55
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.52 E-value=3.4e-12 Score=129.74 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=49.4
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCc--EEEEEEcCC---cEEEccEEEEccChHH-HhhhcC
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT--VKNFLLTNG---NVIDGDAYVFATPVDI-LKLQLP 314 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~--~~~V~~~~g---~~i~ad~VI~A~~~~~-~~~ll~ 314 (508)
...+...|.+.+++.|++|+++++|++|+.++++. .+.|++.++ .+++||.||.|.|.+. +++.++
T Consensus 119 ~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 119 QDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 34667778888888899999999999999865511 123555554 6799999999999964 455553
No 56
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.48 E-value=9.4e-12 Score=124.76 Aligned_cols=58 Identities=28% Similarity=0.315 Sum_probs=47.0
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCC------CCChhHHHHHHHcCCCCc
Q 010539 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLV------GAYPNIQNLFGELGINDR 111 (508)
Q Consensus 54 ~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~------g~~~~~~~l~~~lg~~~~ 111 (508)
...++||+|||||++||++|..|+++|++|+|||+.+... +..++..++++++|+...
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~ 72 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPA 72 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGG
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHH
Confidence 3467899999999999999999999999999999986552 224566788888887543
No 57
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.48 E-value=2.5e-12 Score=131.02 Aligned_cols=61 Identities=7% Similarity=-0.010 Sum_probs=50.4
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc---CC--cEEEccEEEEccChHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPVDIL 309 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~---~g--~~i~ad~VI~A~~~~~~ 309 (508)
++.+++..+.+.+++.|++|+++++|++|..+ ++.+++|++. .| .+++||.||+|+|+++-
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 46788899999999999999999999999984 5566677753 23 36999999999999863
No 58
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.48 E-value=4.2e-12 Score=127.32 Aligned_cols=58 Identities=29% Similarity=0.327 Sum_probs=47.2
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCC------CCChhHHHHHHHcCCCCc
Q 010539 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLV------GAYPNIQNLFGELGINDR 111 (508)
Q Consensus 54 ~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~------g~~~~~~~l~~~lg~~~~ 111 (508)
.++++||+|||||++||++|+.|+++|++|+|||+.+... +..++..++++++|+...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~ 71 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPR 71 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGG
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHH
Confidence 4577999999999999999999999999999999986552 224566788888887543
No 59
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.48 E-value=2.7e-13 Score=134.35 Aligned_cols=59 Identities=24% Similarity=0.453 Sum_probs=51.1
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
...+.+.|.+.+++.|++|+++++|++|.. +++.+++|.+.+|++++||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 457888899999999999999999999997 45666789998887799999999999765
No 60
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.47 E-value=3e-13 Score=128.95 Aligned_cols=112 Identities=13% Similarity=0.160 Sum_probs=60.8
Q ss_pred hcccCccHHHHHH-HcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhhccCCeEEeecCCccccchHHHHH
Q 010539 180 EAQDGLTVQEWMR-KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVE 258 (508)
Q Consensus 180 ~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~ 258 (508)
..++..++.+||. ..+++....+.+ ..+. .......++....+.. ......+..+..+.|| ...|.+.|++
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~---~~~~~~~~s~l~~l~~---~~~~~~~~~~~~i~GG-~~~l~~~l~~ 328 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVEAI-GTIE---NMTSRLHLAFFHSFLG---RSDIDPRATYWEIEGG-SRMLPETLAK 328 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT---TCTTTTTSBHHHHHHH---CSCSCTTCCEEEETTC-TTHHHHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc---CccccchhhHHHHHHH---hhhhccCCceEEECCc-HHHHHHHHHH
Confidence 3467899999998 677776554422 2221 1111123444333221 1111234456666666 6888888887
Q ss_pred HHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEcc
Q 010539 259 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 304 (508)
Q Consensus 259 ~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~ 304 (508)
.+ +.+|+++++|++|..+++|+. |.+.+......-+|+++|
T Consensus 329 ~l---~~~i~l~~~V~~I~~~~~gv~--v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 329 DL---RDQIVMGQRMVRLEYYDPGRD--GHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp HG---GGTEECSEEEEEEEECCCC---------------CCEEEEE
T ss_pred hc---CCcEEecCeEEEEEECCCceE--EEeCCCcCCCCCeeEEEe
Confidence 77 357999999999998666643 333333234556677655
No 61
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.46 E-value=9.6e-13 Score=132.69 Aligned_cols=58 Identities=26% Similarity=0.326 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC-c--EEEcc-EEEEccChHH
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-N--VIDGD-AYVFATPVDI 308 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g-~--~i~ad-~VI~A~~~~~ 308 (508)
.+...|.+.+++.|++|+++++|++|..++++++++|.+.++ + +++|| .||+|+|.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788899999999999999999999999854688888876543 2 58996 9999998764
No 62
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.46 E-value=1.8e-12 Score=126.70 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE-cCCc--EEEccEEEEccChHH-HhhhcC
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQLP 314 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~-~~g~--~i~ad~VI~A~~~~~-~~~ll~ 314 (508)
.+...|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.|.+. +++.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4556677788888999999999999986433323 3666 6786 699999999999864 445554
No 63
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.45 E-value=1.3e-12 Score=133.69 Aligned_cols=60 Identities=22% Similarity=0.259 Sum_probs=49.5
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc--CCc--EEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~i~ad~VI~A~~~~~ 308 (508)
+..+...|.+.+++.|++|+++++|++|..++++++++|.+. +|+ ++.||.||+|+|.+.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 357888899999999999999999999998544777777765 565 689999999998753
No 64
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.44 E-value=4e-13 Score=131.10 Aligned_cols=57 Identities=16% Similarity=0.303 Sum_probs=48.6
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
...+.+.|.+.+++.|++|+++++|++|..++++ +.|.+.+| ++.||.||+|+|.+.
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECCCCcc
Confidence 4578888999999999999999999999874443 45888888 799999999999875
No 65
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.43 E-value=1.5e-12 Score=132.95 Aligned_cols=60 Identities=27% Similarity=0.281 Sum_probs=49.3
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc--CCc--EEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~i~ad~VI~A~~~~~ 308 (508)
...+...|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+|.+.
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 456788899999999999999999999997443777777765 674 689999999998754
No 66
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.40 E-value=3.5e-11 Score=119.59 Aligned_cols=64 Identities=22% Similarity=0.185 Sum_probs=48.6
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc---CCc--EEEccEEEEccChHHH-hhhcC
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDIL-KLQLP 314 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~--~i~ad~VI~A~~~~~~-~~ll~ 314 (508)
..+.+.|.+.+.+.|++|+++++|++|.. +++.+++|++. +|+ ++.||.||.|+|.+.. ++.++
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 35666788888888999999999999997 45555556554 665 7999999999998653 34443
No 67
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.39 E-value=1.4e-10 Score=119.87 Aligned_cols=55 Identities=25% Similarity=0.408 Sum_probs=46.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-cCCceEEEeccccCC------CCChhHHHHHHHcCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVLV------GAYPNIQNLFGELGIND 110 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE~~~~~~------g~~~~~~~l~~~lg~~~ 110 (508)
.++||+|||||++||++|+.|++ .|++|+|||+++... +..++..++++++|+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~ 92 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFAD 92 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHH
Confidence 56899999999999999999999 999999999987552 23456778888888754
No 68
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.38 E-value=2.4e-11 Score=122.64 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=48.1
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE--cCCc--EEEccEEEEccChHH-Hhhhc
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGN--VIDGDAYVFATPVDI-LKLQL 313 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~--~~g~--~i~ad~VI~A~~~~~-~~~ll 313 (508)
..+...|.+.+++.|++|+++++|++|.. +++.+++|.+ .+|+ ++.||.||.|+|.+. +++.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 45667788888889999999999999998 4555544554 4573 799999999999964 33444
No 69
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.38 E-value=2.9e-11 Score=121.61 Aligned_cols=60 Identities=20% Similarity=0.153 Sum_probs=50.6
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc---CCc--EEEccEEEEccChHHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDIL 309 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~--~i~ad~VI~A~~~~~~ 309 (508)
++.+++..|.+.++++|++|+++++|++|..+ + .+++|++. +|+ +++||.||+|+|.+.-
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 47889999999999999999999999999974 3 45677773 564 6999999999999863
No 70
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.38 E-value=2.1e-11 Score=117.56 Aligned_cols=202 Identities=11% Similarity=0.064 Sum_probs=103.1
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHh
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 327 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~ 327 (508)
+|..++..|.+.+++.|++|+. ++|++|.. + . + .||.||+|+|.+.. .|++...
T Consensus 140 ~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~--~------~-----~-~a~~VV~A~G~~s~-~l~~~~~---------- 193 (363)
T 1c0p_A 140 HAPKYCQYLARELQKLGATFER-RTVTSLEQ--A------F-----D-GADLVVNATGLGAK-SIAGIDD---------- 193 (363)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCSBGGG--T------C-----S-SCSEEEECCGGGGG-TSBTTCC----------
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEcccHhh--c------C-----c-CCCEEEECCCcchh-hccCccc----------
Confidence 5789999999999999999998 99999863 2 0 1 79999999999973 3433211
Q ss_pred hcCCcCEEEEEEEecccccccccccccccCccceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHH
Q 010539 328 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKEL 407 (508)
Q Consensus 328 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 407 (508)
....+.....+.++.+. . ...+...... ...|.. + .+++..++..... ...+....+++..+.+++.+
T Consensus 194 -~~~~p~rg~~~~~~~~~-~-~~~~~~~~~~-~~~y~~-----p--~~~g~~~iG~t~~-~~~~~~~~~~~~~~~l~~~~ 261 (363)
T 1c0p_A 194 -QAAEPIRGQTVLVKSPC-K-RCTMDSSDPA-SPAYII-----P--RPGGEVICGGTYG-VGDWDLSVNPETVQRILKHC 261 (363)
T ss_dssp -TTEEEEEEEEEEEECCC-C-CCEEECSCTT-CCEEEE-----E--ETTTEEEEECCCE-ETCCCCSCCHHHHHHHHHHH
T ss_pred -CCccccCCeEEEEeCCc-c-cceEeeccCC-CcEEEE-----E--cCCCEEEEEeeec-cCCCCCCCCHHHHHHHHHHH
Confidence 11123333344444322 1 1111000000 001110 0 0123222221111 12233334566678899999
Q ss_pred HHhCCCCccccc-ccceEEE-ee--EeecCCceeccCC----------CCCCCCCCC--CCCC--CceEEecccccCCCC
Q 010539 408 AKLFPDEISADQ-SKAKIVK-YH--VVKTPRSVYKTIP----------NCEPCRPLQ--RSPV--EGFYLAGDYTKQKYL 469 (508)
Q Consensus 408 ~~~~~~~~~~~~-~~~~~~~-~~--~~~~~~~~~~~~~----------~~~~~~~~~--~~~~--~~l~~aG~~~~~~~~ 469 (508)
.+++|....... ....+.. |. .-..+.+.+.... ++....+.. .... +|+|+|..+..
T Consensus 262 ~~~~P~l~~~~~~~~~~i~~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g---- 337 (363)
T 1c0p_A 262 LRLDPTISSDGTIEGIEVLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSS---- 337 (363)
T ss_dssp HHHCGGGSSSSSGGGCEEEEEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTT----
T ss_pred HHhCccccCCcccccceEeeceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCC----
Confidence 999986421000 0011111 11 1112222221000 000000000 1124 68998876555
Q ss_pred CcHHHHHHHHHHHHHHHHHHHH
Q 010539 470 ASMEGAVLSGKLCAQAIVQDYV 491 (508)
Q Consensus 470 ~~~~gA~~sg~~aA~~il~~l~ 491 (508)
.|+.-|...|+.+|+.|+..+.
T Consensus 338 ~G~~~a~~~g~~~a~li~~~l~ 359 (363)
T 1c0p_A 338 AGYQQSWGAAEDVAQLVDEAFQ 359 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchheeccHHHHHHHHHHHHHH
Confidence 5888899999999999988774
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.38 E-value=4.1e-11 Score=122.34 Aligned_cols=59 Identities=24% Similarity=0.289 Sum_probs=48.9
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC------C---------cEEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~------g---------~~i~ad~VI~A~~~~~ 308 (508)
..+...|.+.+++.|++|+++++|++|..++++.+++|.+.+ | .+++||.||.|.|.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 466777888888889999999999999986667777787753 3 5799999999999864
No 72
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.34 E-value=1e-11 Score=132.74 Aligned_cols=59 Identities=24% Similarity=0.233 Sum_probs=52.1
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+|..++..|.+.++++|++|+++++|++|.. +++.+++|.+.+| ++.||.||+|+|.+.
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 4778999999999999999999999999997 4555667888888 799999999999986
No 73
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.34 E-value=9.3e-11 Score=115.16 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=39.6
Q ss_pred CCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH-Hhhhc
Q 010539 264 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQL 313 (508)
Q Consensus 264 g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~-~~~ll 313 (508)
+.+|+++++|++++..+++.+ .|++.+|++++||.||-|-|.+. +++.+
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 568999999999997666654 58899999999999999999864 34433
No 74
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.34 E-value=9.4e-12 Score=121.62 Aligned_cols=55 Identities=25% Similarity=0.291 Sum_probs=42.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCC-----CCC----hhHHHHHHHcCCC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLV-----GAY----PNIQNLFGELGIN 109 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~-----g~~----~~~~~l~~~lg~~ 109 (508)
+..+||+|||||++||++|+.|++.|++|+|||+++... +.. ....++++++|+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~ 87 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLL 87 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChH
Confidence 356899999999999999999999999999999986542 111 1335667777763
No 75
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.34 E-value=7.4e-12 Score=120.24 Aligned_cols=190 Identities=12% Similarity=0.001 Sum_probs=104.8
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcchhccHHHHHHh
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 327 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~ 327 (508)
+|.+++..|.+.++++|++|+. ++|++|+.. + .+.||.||+|+|.+.. .|++..
T Consensus 140 ~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~-~------------~~~a~~VV~A~G~~s~-~l~~~~----------- 193 (351)
T 3g3e_A 140 EGKNYLQWLTERLTERGVKFFQ-RKVESFEEV-A------------REGADVIVNCTGVWAG-ALQRDP----------- 193 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH-H------------HTTCSEEEECCGGGGG-GTSCCT-----------
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh-h------------cCCCCEEEECCCcChH-hhcCCC-----------
Confidence 5789999999999999999988 899888632 1 1679999999999874 344321
Q ss_pred hcCCcCEEEEEEEecccccccccccccccCc----cceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHH
Q 010539 328 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSS----LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDAT 403 (508)
Q Consensus 328 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (508)
...+.....+.++.+. ....++.... -...|. .|....++.-.......+....+++..+.+
T Consensus 194 --~l~p~rg~~~~~~~~~---~~~~~~~~~~~~~~~~~~y~---------~p~~~~~~iGg~~~~~~~~~~~~~~~~~~l 259 (351)
T 3g3e_A 194 --LLQPGRGQIMKVDAPW---MKHFILTHDPERGIYNSPYI---------IPGTQTVTLGGIFQLGNWSELNNIQDHNTI 259 (351)
T ss_dssp --TCEEEEEEEEEEECTT---CCSEEEECCTTTCTTCSCEE---------EECSSCEEEECCCEETCCCCSCCHHHHHHH
T ss_pred --ceeecCCcEEEEeCCC---cceEEEeccccCCCCceeEE---------EeCCCcEEEeeeeecCCCCCCCCHHHHHHH
Confidence 1123333444444321 1111111100 000111 111112221111111223333456778899
Q ss_pred HHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCC-CCCC-CCC-CCceEEecccccCCCCCcHHHHHHHHH
Q 010539 404 MKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC-RPLQ-RSP-VEGFYLAGDYTKQKYLASMEGAVLSGK 480 (508)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~l~~aG~~~~~~~~~~~~gA~~sg~ 480 (508)
++.+.+++|..... .+. ..+.+.....+. ... .+.+ ..+ .+|||++..+.. .|+.-|...|+
T Consensus 260 ~~~~~~~~P~l~~~-----~i~-----~~w~G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~ 324 (351)
T 3g3e_A 260 WEGCCRLEPTLKNA-----RII-----GERTGFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCAL 324 (351)
T ss_dssp HHHHHHHCGGGGGC-----EEE-----EEEEEEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHH
T ss_pred HHHHHHhCCCccCC-----cEe-----eeeEeeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHH
Confidence 99999999874321 111 112222222332 110 0000 122 578998876655 48888899999
Q ss_pred HHHHHHHHHHHH
Q 010539 481 LCAQAIVQDYVL 492 (508)
Q Consensus 481 ~aA~~il~~l~~ 492 (508)
..|+.|...++.
T Consensus 325 ~la~li~~~~~~ 336 (351)
T 3g3e_A 325 EAAKLFGRILEE 336 (351)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 76
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.31 E-value=3.9e-11 Score=122.38 Aligned_cols=60 Identities=28% Similarity=0.334 Sum_probs=48.0
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc--CCc--EEEccEEEEccChHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~i~ad~VI~A~~~~~ 308 (508)
...+...|.+.+++.|++|+++++|++|..++++.+++|.+. +|+ ++.||.||+|+|.+.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 346788899999999999999999999987432777777765 564 589999999998654
No 77
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.31 E-value=5.5e-11 Score=121.30 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=48.5
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE---cCCc--EEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~i~ad~VI~A~~~~~ 308 (508)
..++..|.+.+++.|++|+++++|++|..++++.+++|.. .+|+ ++.|+.||+|+|.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 5678889999988999999999999999743667777775 4564 589999999999864
No 78
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.28 E-value=1.5e-10 Score=117.61 Aligned_cols=55 Identities=27% Similarity=0.350 Sum_probs=45.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCC------CCChhHHHHHHHcCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLV------GAYPNIQNLFGELGIND 110 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~------g~~~~~~~l~~~lg~~~ 110 (508)
.++||+|||||++||++|..|++.|++|+|||+++... +..+...++++++|+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~ 85 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAK 85 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChH
Confidence 35799999999999999999999999999999987652 22456678888888653
No 79
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=3.5e-11 Score=116.99 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=48.3
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcC---CCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~---~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
...+.+.|.+.+++.|++|+++++|++|..++ ++. +.|.+.+| +++||.||+|+|.+..
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCccC
Confidence 56788889999999999999999999998741 233 35778777 7999999999998763
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.28 E-value=1.7e-11 Score=117.88 Aligned_cols=56 Identities=14% Similarity=-0.108 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEE-EEEcCCcEEEccEEEEccChHHH
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKN-FLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~-V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
.+.+.+.+.+++.|++++++++|++|..+ ++. +. |.+.+| ++.+|+||+|+|.+..
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~-~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHF-GER-LRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTE-EEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCc-EEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 34455666777889999999999999974 333 34 778777 7999999999998653
No 81
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.28 E-value=5.8e-11 Score=115.96 Aligned_cols=55 Identities=24% Similarity=0.369 Sum_probs=45.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC-C--C----CChhHHHHHHHcCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL-V--G----AYPNIQNLFGELGIND 110 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~-~--g----~~~~~~~l~~~lg~~~ 110 (508)
..+||+|||||++||++|+.|+++|++|+|+|+++.. . + ..++..++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc
Confidence 4589999999999999999999999999999998764 1 1 2456678888888754
No 82
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.27 E-value=1.3e-11 Score=120.65 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=51.3
Q ss_pred cccchHHHHHHHHHc-CCEEEeCceeeEEEEcCCCcEE-EEEEcCCcEEEccEEEEccChHH-HhhhcC
Q 010539 249 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQLP 314 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~~~-~V~~~~g~~i~ad~VI~A~~~~~-~~~ll~ 314 (508)
...+.+.|.+.+++. |++|+++++|++|+.++++ ++ .|++.+|++++||.||.|+|.+. +++.++
T Consensus 106 r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 106 CESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 346677788888887 8999999999999975444 32 47888888899999999999864 445554
No 83
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.25 E-value=1.2e-11 Score=114.58 Aligned_cols=39 Identities=31% Similarity=0.361 Sum_probs=35.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc-CCceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~-g~~V~vlE~~~~~~g 94 (508)
.++||+|||||++|+++|+.|++. |.+|+|+|+++..++
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg 77 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGG 77 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCC
Confidence 457999999999999999999997 999999999987654
No 84
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.25 E-value=1.3e-10 Score=117.51 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=51.6
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
+..+...|.+.+++.|++++.+ +|++|..++++.++.|++.+|+++.||.||.|+|.+..
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4577888889998899999999 99999975667677788888878999999999999753
No 85
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.23 E-value=3.4e-11 Score=116.84 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=48.5
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH-HhhhcC
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQLP 314 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~-~~~ll~ 314 (508)
..+.+.|.+.+.+.|++|+++++|++|+. ++ .|++.+|+++.||.||.|+|.+. +++++.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 46677788888888999999999999985 44 37788888899999999999864 444443
No 86
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.22 E-value=1.5e-11 Score=120.41 Aligned_cols=58 Identities=16% Similarity=0.218 Sum_probs=45.2
Q ss_pred ccccchHHHHHHHHHcCCEEEeCceee---------EEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 248 PPERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 248 ~~~~l~~~l~~~l~~~g~~i~~~~~V~---------~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
++..+...|.+.+++.|++|+++++|+ +|..+ ++.+ .|.+.+| ++.||.||+|+|.+.
T Consensus 170 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 170 RPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp CHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 367889999999999999999999999 88763 3334 5777777 799999999999985
No 87
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.21 E-value=3.5e-10 Score=115.51 Aligned_cols=59 Identities=10% Similarity=0.064 Sum_probs=48.3
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE---cCCc--EEEccEEEEccChHHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDIL 309 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~i~ad~VI~A~~~~~~ 309 (508)
..++..|.+.+.+.|++|+.+++|++|.. +++.+++|.+ .+|+ ++.|+.||+|+|.+..
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 46788888888888999999999999997 4677777765 3564 6899999999998653
No 88
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.21 E-value=1.4e-10 Score=117.84 Aligned_cols=60 Identities=17% Similarity=0.231 Sum_probs=51.6
Q ss_pred cccchHHHHHHHHHc-CCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 249 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
+..+...|.+.+++. |++|+++ +|++|..++++.++.|++.+|+++.||.||.|+|.+..
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 457888899999888 9999999 99999875567777888988888999999999998753
No 89
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.21 E-value=5.9e-11 Score=120.06 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=45.9
Q ss_pred cchHHHHHHHHHcCC--EEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 251 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+.+.+++.|+ +|+++++|++++.++++..+.|++.+|+++.||+||+|+|..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 344456666677777 899999999999866655677999999889999999999954
No 90
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.21 E-value=2e-11 Score=114.57 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=33.1
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 54 ~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
.++++||+|||||++||+||++|+++|++|+|+|+...
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 35789999999999999999999999999999998753
No 91
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.21 E-value=5.2e-10 Score=115.83 Aligned_cols=55 Identities=29% Similarity=0.398 Sum_probs=46.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-----cCCceEEEeccccC------CCCChhHHHHHHHcCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVL------VGAYPNIQNLFGELGIND 110 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~-----~g~~V~vlE~~~~~------~g~~~~~~~l~~~lg~~~ 110 (508)
.++||+|||||++||++|..|++ .|++|+|||+++.. .+..++..++++++|+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~ 72 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLAD 72 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHH
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHH
Confidence 35799999999999999999999 99999999997654 233567788899998754
No 92
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.20 E-value=6.4e-11 Score=106.22 Aligned_cols=56 Identities=13% Similarity=0.065 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHc-CCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 251 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 251 ~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+...|.+.+++. |++++ +++|++|.. +++.+++|.+.+|+++.||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4556677888886 89998 679999987 45566678888887899999999999853
No 93
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.20 E-value=1.3e-10 Score=118.14 Aligned_cols=60 Identities=17% Similarity=0.270 Sum_probs=51.4
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
+..+...|.+.+++.|++++.+ +|++|..++++.++.|++.+|+++.||.||.|+|.+..
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 5678888999998899999999 89999976566666788888878999999999999753
No 94
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.19 E-value=1e-10 Score=118.20 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=44.6
Q ss_pred ccchHHHHHHHHH-cCCEEEeCceeeEEEEcCCC------cEEEEEEc---CCc--EEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g------~~~~V~~~---~g~--~i~ad~VI~A~~~~~ 308 (508)
..+...|.+.+++ .|++|+++++|++|..++++ .+++|.+. +|+ ++.|+.||+|+|.+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 4677778888888 69999999999999974434 67777764 564 689999999998865
No 95
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.18 E-value=6.7e-11 Score=119.38 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCC--EEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 251 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+.+.+++.|+ +|+++++|++++.++++..+.|++.+|+++.||.||+|+|...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 444556666677787 8999999999998666556679999998899999999999643
No 96
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.18 E-value=3.9e-10 Score=115.96 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEE---cCCc--EEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~i~ad~VI~A~~~~~ 308 (508)
..+...|.+.+.+.|++|+.+++|++|.. +++.+++|.+ .+|+ .+.|+.||+|+|.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 46788889998888999999999999987 4566777765 4564 489999999998864
No 97
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.17 E-value=6.8e-11 Score=110.31 Aligned_cols=39 Identities=33% Similarity=0.379 Sum_probs=35.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~~g 94 (508)
..+||+|||||++||++|+.|+++ |++|+|||+....+|
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 358999999999999999999997 999999999987654
No 98
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.16 E-value=7.1e-11 Score=119.35 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHcCC--EEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 251 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+...+.+.+++.|+ +|+++++|++++.++++..+.|++.+|+++.||.||+|+|..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 334445555566676 899999999999866555667999999889999999999954
No 99
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.16 E-value=6.9e-11 Score=118.40 Aligned_cols=61 Identities=15% Similarity=0.132 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcC-CCcEEEEEE--c-CC--cEEEccEEEEccChHHHh
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLL--T-NG--NVIDGDAYVFATPVDILK 310 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~g~~~~V~~--~-~g--~~i~ad~VI~A~~~~~~~ 310 (508)
..+...|.+.+++.|++|+++++|++|..++ ++..+.|++ . +| .++.||.||+|+|.....
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 3556677888888899999999999998642 232334666 3 55 469999999999987543
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.16 E-value=2.5e-10 Score=98.05 Aligned_cols=54 Identities=20% Similarity=0.193 Sum_probs=43.1
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+.+.+++.|++++++ +|++|+.++++ +.|++.+| ++.+|.||+|+|...
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECCC-EEEECEEEECCCCCC
Confidence 34455777788889999999 99999974444 35788888 799999999999863
No 101
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.16 E-value=5.5e-10 Score=112.82 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=48.1
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcE--EEEEEcCCc-EEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~--~~V~~~~g~-~i~ad~VI~A~~~~~ 308 (508)
..+.+.+.+.+++.|++|+++++|++|..++++.+ +.|++.+|+ ++.+|.||+|+|...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 45677888899999999999999999987445543 357788886 799999999999753
No 102
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.16 E-value=1.3e-10 Score=116.28 Aligned_cols=57 Identities=21% Similarity=0.240 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
..+.+.+.+.+++.|++|+++++|++|+.+++ .+ .|++.+|+++.+|.||+|+|...
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 45677788888999999999999999987433 33 58888888899999999999754
No 103
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.15 E-value=3.8e-10 Score=114.22 Aligned_cols=60 Identities=20% Similarity=0.325 Sum_probs=50.0
Q ss_pred cccchHHHHHHHHH-cCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 249 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 249 ~~~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
...+...|.+.+++ .|++++.+ .|++|..++++.++.|++.+|.++.||.||.|+|.+..
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 45677888888888 89999999 59999875567666788888777999999999999753
No 104
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.15 E-value=1.5e-10 Score=116.86 Aligned_cols=60 Identities=8% Similarity=0.035 Sum_probs=48.6
Q ss_pred ccchHHHHHHHHH-cCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhh
Q 010539 250 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 311 (508)
Q Consensus 250 ~~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ 311 (508)
..+...|.+.+++ .|++| ++++|+.|.. +++.+++|.+.+|.++.||.||+|+|.+....
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~ 184 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGK 184 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTCCE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCccCc
Confidence 3566778888887 58999 6789999987 45677789998898899999999999875443
No 105
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.14 E-value=1.7e-10 Score=115.92 Aligned_cols=61 Identities=13% Similarity=-0.003 Sum_probs=49.2
Q ss_pred ccchHHHHHHHHH-cCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh
Q 010539 250 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 250 ~~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l 312 (508)
..+...|.+.+++ .|++| ++++|++|.. +++.+++|.+.+|.++.||.||+|+|.+....+
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTCEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccCce
Confidence 4566778888887 48999 6789999987 566777899999988999999999998654433
No 106
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.14 E-value=1.4e-10 Score=107.70 Aligned_cols=39 Identities=33% Similarity=0.393 Sum_probs=35.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~~g 94 (508)
..+||+|||||++|++||+.|++. |++|+|+|+++..+|
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 456999999999999999999998 999999999987754
No 107
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.13 E-value=2.1e-10 Score=110.45 Aligned_cols=56 Identities=25% Similarity=0.261 Sum_probs=43.6
Q ss_pred chHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 252 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 252 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.+.+.+++.|++++++++|++|..++++ .+.|.+.+|+++.+|+||+|+|...
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDDG-TFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCCc-eEEEEECCCcEEEeeEEEEccCCCc
Confidence 3444666667778999999999999975443 3458888887899999999999853
No 108
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.13 E-value=2.1e-10 Score=109.28 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=44.4
Q ss_pred CCCCCCCceEEecccccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCC
Q 010539 449 LQRSPVEGFYLAGDYTKQK-YLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 508 (508)
Q Consensus 449 ~~~~~~~~l~~aG~~~~~~-~~~~~~gA~~sg~~aA~~il~~l~~~~~~~~~~~~~~~~~~ 508 (508)
.+++..++||.+||.+... ....+..|+..|..+|+.|...+... ......++....||
T Consensus 274 ~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~-~~~~~~~~~~~~~~ 333 (335)
T 2zbw_A 274 TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPA-LKVNPGHSSEKAAP 333 (335)
T ss_dssp TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHCTT-SCSSCCCGGGSCCT
T ss_pred CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhhhh-hccCCcccccccCC
Confidence 3466789999999988632 23577889999999999999988543 23446777777777
No 109
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.12 E-value=1.6e-10 Score=117.20 Aligned_cols=42 Identities=24% Similarity=0.461 Sum_probs=37.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
+.++||+|||||++|+++|+.|++.|++|+|||+++.++|.+
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 356899999999999999999999999999999998887643
No 110
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.11 E-value=3.2e-10 Score=107.34 Aligned_cols=53 Identities=21% Similarity=0.181 Sum_probs=40.7
Q ss_pred chHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 252 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 252 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
+.+.+.+.+++.|+++++ ++|++|..+++. +.|.+.+|+++.+|+||+|+|..
T Consensus 72 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 72 MIKVFNKHIEKYEVPVLL-DIVEKIENRGDE--FVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHTTTCCEEE-SCEEEEEEC--C--EEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEecCCE--EEEEECCCCEEEcCEEEECcCCC
Confidence 344456666777899999 899999874333 34788887889999999999987
No 111
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.10 E-value=2.1e-10 Score=109.04 Aligned_cols=55 Identities=15% Similarity=0.227 Sum_probs=42.5
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+...+.+.+++.|++++++++|++|...+++ .+.|.+.+|+ +.+|+||+|+|..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 68 ELINNLKEQMAKFDQTICLEQAVESVEKQADG-VFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHTTSCCEEECSCCEEEEEECTTS-CEEEEESSEE-EEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHhCCcEEccCEEEEEEECCCC-cEEEEECCCE-EEeCEEEECCCCC
Confidence 34445666667778999999999999975442 3458888885 9999999999983
No 112
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.09 E-value=1.1e-10 Score=111.30 Aligned_cols=36 Identities=42% Similarity=0.459 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.++||+|||||++||++|+.|+++|++|+|+|+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 456899999999999999999999999999999965
No 113
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.09 E-value=5.5e-10 Score=109.48 Aligned_cols=53 Identities=38% Similarity=0.573 Sum_probs=42.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCc-eEEEeccccCCCC------ChhHHHHHHHcCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVLVGA------YPNIQNLFGELGI 108 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~-V~vlE~~~~~~g~------~~~~~~l~~~lg~ 108 (508)
..+||+|||||++||++|..|++.|++ |+|||+.+..... .++..++++++|+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~ 62 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGL 62 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCC
Confidence 358999999999999999999999999 9999998765321 3455677777775
No 114
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.07 E-value=3.2e-11 Score=102.68 Aligned_cols=102 Identities=21% Similarity=0.152 Sum_probs=72.1
Q ss_pred chhhcCCChHHHHHHHHHHHHHhCCCCcccccccceE--EEeeEeecCC--ceecc-CCCC-CCCCCCCCCCCCceEEec
Q 010539 388 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI--VKYHVVKTPR--SVYKT-IPNC-EPCRPLQRSPVEGFYLAG 461 (508)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~-~~~~-~~~~~~~~~~~~~l~~aG 461 (508)
+..+..++++++++.++++|.++|+.... +. ... ....|...|. +.|.+ .++. ....+.++.|.++|||||
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~~--~~-~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAG 124 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRIE--VF-YTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAG 124 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGGG--GT-EEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECS
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCcH--hh-ccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEE
Confidence 46777889999999999999999964331 11 112 3334444444 44443 3442 122344567889999999
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 010539 462 DYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 493 (508)
Q Consensus 462 ~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~ 493 (508)
++++. +.++|+||+.||+++|++|+..++..
T Consensus 125 e~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 125 EHVSL-KHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp GGGTT-STTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred HHHcC-CccCHHHHHHHHHHHHHHHHHHhccC
Confidence 99996 77999999999999999999988653
No 115
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.07 E-value=2.7e-09 Score=109.04 Aligned_cols=59 Identities=20% Similarity=0.143 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHHcC-CEEEeCceeeEEEEcCCCcEEEEEE---cCCc--EEEccEEEEccChHHH
Q 010539 250 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDIL 309 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~i~ad~VI~A~~~~~~ 309 (508)
..+...|.+.+.+.| ++|+++++|++|.. +++.+++|.. .+|+ ++.|+.||+|+|.+..
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILV-DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 467788888888888 99999999999997 4566666653 4675 6999999999998653
No 116
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.07 E-value=8.1e-10 Score=110.00 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=48.7
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEE-EcCCcEEEccEEEEccChHHHhh
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPVDILKL 311 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~-~~~g~~i~ad~VI~A~~~~~~~~ 311 (508)
..+.+.+.+.+++.|++|+++++|++|+.++++. +.|+ +.+|+ +.+|.||+|+|...-..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 4567788888999999999999999999754553 3577 88887 99999999999864333
No 117
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.04 E-value=2.1e-09 Score=112.23 Aligned_cols=65 Identities=26% Similarity=0.232 Sum_probs=48.7
Q ss_pred CCCCCcchhhhccccCC--CCCCCCCCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 31 DIDNTSNFLEAAYLSSS--FRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 31 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
...|..|+....+.... ....++....+||+|||||++||+||+.|+++|++|+|+|+++..+|.
T Consensus 363 ~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~ 429 (690)
T 3k30_A 363 PIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGR 429 (690)
T ss_dssp CCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTH
T ss_pred cccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCE
Confidence 44577787655543221 111223456789999999999999999999999999999999887664
No 118
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.04 E-value=3.7e-09 Score=109.11 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=46.0
Q ss_pred ccchHHHHHHHHHc-CC-EEEeCceeeEEEEcCC--CcEEEEEE---cCCc--EEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~-g~-~i~~~~~V~~I~~~~~--g~~~~V~~---~~g~--~i~ad~VI~A~~~~~ 308 (508)
..+...|.+.+++. |+ +|+.++.|++|..+++ +.+++|.. .+|+ ++.|+.||+|+|...
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 35667788888877 99 9999999999997433 27777764 4554 589999999998764
No 119
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.04 E-value=1.1e-09 Score=105.83 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=38.7
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
..+.+++.|++++++++|++|+. + .+. |++.+|+++.+|+||+|||..
T Consensus 68 ~~~~~~~~~i~~~~~~~V~~id~-~-~~~--v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 68 KNDWYEKNNIKVITSEFATSIDP-N-NKL--VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp CHHHHHHTTCEEECSCCEEEEET-T-TTE--EEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHCCCEEEeCCEEEEEEC-C-CCE--EEECCCCEEECCEEEEecCCC
Confidence 34445677999999999999985 3 333 788889899999999999973
No 120
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.03 E-value=6.9e-10 Score=112.02 Aligned_cols=59 Identities=12% Similarity=0.166 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHc-CCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHh
Q 010539 250 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK 310 (508)
Q Consensus 250 ~~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~ 310 (508)
..+...+.+.+++. |++|+ +..|+.|.. +++.+.+|.+.+|.++.||.||+|+|.+...
T Consensus 117 ~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 117 TQYSLYMRRIVEHEPNIDLL-QDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred HHHHHHHHHHHHhCCCCEEE-eeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 35666777788774 89994 569999987 4566777889888889999999999987543
No 121
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.03 E-value=5.4e-10 Score=105.93 Aligned_cols=38 Identities=39% Similarity=0.520 Sum_probs=34.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g 94 (508)
.++||+|||||++|+++|+.|++.|++|+|+|++ ..+|
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg 44 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGG 44 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCc
Confidence 4589999999999999999999999999999998 3433
No 122
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.02 E-value=4.6e-10 Score=105.71 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=39.2
Q ss_pred hHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 253 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 253 ~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+.+.+.|+++++ ++|++|..+++ .+.|.+.+|+++.+|+||+|+|..
T Consensus 62 ~~~l~~~~~~~~v~~~~-~~v~~i~~~~~--~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 62 MQPWQEQCFRFGLKHEM-TAVQRVSKKDS--HFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHTTSCEEEC-SCEEEEEEETT--EEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHcCCEEEE-EEEEEEEEcCC--EEEEEEcCCCEEECCEEEECCCCC
Confidence 33455566677899988 79999987433 234767788889999999999964
No 123
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.02 E-value=2.9e-09 Score=105.85 Aligned_cols=59 Identities=24% Similarity=0.232 Sum_probs=45.2
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc-CCcEEEccEEEEccChHHH
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~-~g~~i~ad~VI~A~~~~~~ 309 (508)
...+...|.+.+++.|++|+.+++| +|.. +++.+++|... ++.++.||.||+|+|.+..
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 3467788888887889999999999 9987 45666666653 2235889999999998653
No 124
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.01 E-value=3.8e-09 Score=108.62 Aligned_cols=59 Identities=12% Similarity=0.141 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHc--CCEEEeCceeeEEEEcCC--CcEEEEEE---cCCc--EEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~--g~~i~~~~~V~~I~~~~~--g~~~~V~~---~~g~--~i~ad~VI~A~~~~~ 308 (508)
..+...|.+.+++. |++|+.++.|++|..+++ |++++|.. .+|+ .+.|+.||+|||...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 46777888888887 999999999999988544 37877764 3453 589999999998654
No 125
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.01 E-value=2.3e-09 Score=100.96 Aligned_cols=36 Identities=33% Similarity=0.438 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+.+||+|||||++||+||.+|+++|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 458999999999999999999999999999998754
No 126
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.01 E-value=1.7e-09 Score=104.38 Aligned_cols=55 Identities=15% Similarity=-0.037 Sum_probs=42.6
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+...+.+.+++.|++++++++|++|..++++ +.|.+.+| ++.+|+||+|+|.+.
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCC
Confidence 34445666677789999999999999974433 34777777 599999999999875
No 127
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.98 E-value=7.1e-10 Score=103.60 Aligned_cols=43 Identities=21% Similarity=0.434 Sum_probs=36.1
Q ss_pred CCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 010539 448 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 492 (508)
Q Consensus 448 ~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~ 492 (508)
+.+++..++||.+||.+.. +..+..|+..|..||..|...+..
T Consensus 251 ~~~~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 251 PMKQTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp TTCBCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 3356778999999998884 268899999999999999998854
No 128
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.98 E-value=6.9e-10 Score=110.03 Aligned_cols=41 Identities=37% Similarity=0.422 Sum_probs=37.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~~~~g~~ 96 (508)
..+||+|||||++||++|..|++.|. +|+|||+++.++|.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 46899999999999999999999999 999999998887654
No 129
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.96 E-value=7.5e-10 Score=105.35 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=39.5
Q ss_pred chHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 252 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 252 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
+...+.+.+++.|++++.++ |++|+.+.++ +.|.+ +|.++.+|+||+|+|.+
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~--~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSSKP--FKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSSSS--EEEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE--EEEEE-CCcEEEcCEEEECCCCC
Confidence 34446666777899999987 9999864333 24666 67789999999999986
No 130
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.95 E-value=1.4e-09 Score=103.63 Aligned_cols=45 Identities=24% Similarity=0.226 Sum_probs=36.6
Q ss_pred CCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010539 451 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 496 (508)
Q Consensus 451 ~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~~~~ 496 (508)
++..++||.+||.+...+ .....|+..|..||..|...|......
T Consensus 277 ~t~~~~iya~GD~~~~~~-~~~~~A~~~g~~aA~~i~~~l~~~~~~ 321 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRTY-RQAVTAAGSGCAAAIDAERWLAEHAAT 321 (335)
T ss_dssp BCSSTTEEECGGGTCCSC-CCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEeeecCCccH-HHHHHHHHhHHHHHHHHHHHhhcCcCc
Confidence 567899999999987532 467889999999999999999765443
No 131
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.95 E-value=3.6e-09 Score=105.52 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=34.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC-----CceEEEeccccCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLV 93 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g-----~~V~vlE~~~~~~ 93 (508)
+.+||+|||||++||++|..|++.| .+|+|||+++..+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4579999999999999999999999 9999999998664
No 132
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.95 E-value=8.4e-10 Score=103.85 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCEEEeCceeeEEEEcCC-CcEEEEEEcCCcEEEccEEEEccChH
Q 010539 254 LPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 254 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~-g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
..+.+.+++.|++++.+++|++|..+.+ +..+.|.+.+|+++.+|+||+|+|..
T Consensus 60 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 60 GALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 3355566677999999999999985322 22345888888789999999999985
No 133
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.94 E-value=4.3e-09 Score=105.28 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=45.8
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC-------CcEEEccEEEEccChHH
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------GNVIDGDAYVFATPVDI 308 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~-------g~~i~ad~VI~A~~~~~ 308 (508)
..+.+.+.+.+++.|++|++++.|++|+.++++..+.|.+.+ |+++.+|.||+|+|...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 456677888889999999999999999875555233466654 25799999999999753
No 134
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.94 E-value=9.8e-09 Score=102.99 Aligned_cols=43 Identities=26% Similarity=0.356 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCChh
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPN 98 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~~ 98 (508)
.++||+|||||++|++||+.|++.|++|+|+|+++..+|.+.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 5689999999999999999999999999999998888776443
No 135
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.93 E-value=2.4e-09 Score=100.85 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=38.4
Q ss_pred CCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 010539 447 RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 495 (508)
Q Consensus 447 ~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~~~ 495 (508)
...+++.+|+||-+||.+...+ ..+..|+..|+.||..+.+.|+.+..
T Consensus 263 d~~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~l~~ 310 (312)
T 4gcm_A 263 KDDMTTSVPGIFAAGDVRDKGL-RQIVTATGDGSIAAQSAAEYIEHLND 310 (312)
T ss_dssp CTTSBCSSTTEEECSTTBSCSC-CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCCCEEEEeecCCCcc-hHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4456788999999999886432 36788999999999999988876544
No 136
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.92 E-value=5.4e-09 Score=105.38 Aligned_cols=55 Identities=15% Similarity=0.213 Sum_probs=42.4
Q ss_pred hHHHHHHHHHcCCEEEeCceeeEEEEcCC-CcEEEEEEcCCcEEEccEEEEccChH
Q 010539 253 CLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 253 ~~~l~~~l~~~g~~i~~~~~V~~I~~~~~-g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
...+.+.+++.|++++.+++|++|..+.+ +..+.|.+.+|+++.+|+||+|+|..
T Consensus 270 ~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 270 AGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 33456666778999999999999985322 22345888888889999999999975
No 137
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.90 E-value=1.5e-09 Score=102.31 Aligned_cols=38 Identities=37% Similarity=0.526 Sum_probs=33.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEE-EeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~v-lE~~~~~~g 94 (508)
.++||+|||||++||+||+.|+++|++|+| +|+ +..+|
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG 41 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGG 41 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCc
Confidence 568999999999999999999999999999 999 44444
No 138
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.90 E-value=1.7e-09 Score=102.20 Aligned_cols=34 Identities=41% Similarity=0.649 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
.++||+|||||++|++||+.|++.|++|+|+|+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 4589999999999999999999999999999985
No 139
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.90 E-value=1.6e-09 Score=102.32 Aligned_cols=34 Identities=38% Similarity=0.583 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
.++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 4579999999999999999999999999999965
No 140
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.89 E-value=6.4e-09 Score=103.29 Aligned_cols=61 Identities=21% Similarity=0.193 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHcCCE--EEeCceeeEEEEcCCCcEEEEEEcC---C--cEEEccEEEEccChHHHh
Q 010539 250 ERLCLPIVEHIQSLGGE--VRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDILK 310 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~--i~~~~~V~~I~~~~~g~~~~V~~~~---g--~~i~ad~VI~A~~~~~~~ 310 (508)
..+.+.+.+.+++.|++ |+++++|++|...+++..+.|++.+ | .++.+|.||+|+|.+...
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTP 168 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSB
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCC
Confidence 45666677777778887 9999999999975443234566654 4 568999999999965433
No 141
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.88 E-value=4.6e-09 Score=103.00 Aligned_cols=47 Identities=19% Similarity=0.290 Sum_probs=37.7
Q ss_pred HHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 257 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 257 ~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+.|++++++++|++|+. +.+. |.+.+|+++.+|++|+|+|..
T Consensus 72 ~~~~~~~~i~~~~~~~v~~id~--~~~~--v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 72 AQFWEDKAVEMKLGAEVVSLDP--AAHT--VKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp HHHHHHTTEEEEETCCEEEEET--TTTE--EEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHCCcEEEeCCEEEEEEC--CCCE--EEECCCCEEEeeEEEEccCCc
Confidence 3445667899999999999985 3333 778888889999999999964
No 142
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.88 E-value=1.1e-08 Score=100.31 Aligned_cols=53 Identities=19% Similarity=0.223 Sum_probs=45.1
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+++.|++|++++.|++|.. +++.+.+|++.+|+++.||.||+|+|...
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred HHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 456667888999999999999987 45667789999998999999999999753
No 143
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.87 E-value=9.8e-09 Score=100.25 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 254 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 254 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.+.+++.|++|+++++|++|.. +++.+.+|++.+|+++.||.||+|+|...
T Consensus 188 ~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 188 SYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 3456677888999999999999986 45667779999998999999999999753
No 144
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.87 E-value=1.8e-08 Score=100.82 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=41.9
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.++++|++|++++.|++|.. ++.+..|.+.+|+++.+|.||+|+|...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 34778889999999999999985 3334567788888899999999999764
No 145
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.87 E-value=2e-08 Score=100.28 Aligned_cols=42 Identities=33% Similarity=0.380 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
.++||+|||||++|++||..|++.|++|+|+|+++..+|.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 568999999999999999999999999999999987777654
No 146
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.87 E-value=1e-08 Score=100.26 Aligned_cols=44 Identities=18% Similarity=0.248 Sum_probs=36.5
Q ss_pred HHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 260 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 260 l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
+.+.|++++++++|++|+. +.+. |.+.+|+++.+|++|+|+|..
T Consensus 67 ~~~~~i~~~~~~~v~~id~--~~~~--v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDV--QTRT--ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHTTCEEEESCCEEEEET--TTTE--EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEEC--CCCE--EEECCCCEEECCEEEEccCCc
Confidence 4567899999999999985 3333 778888889999999999975
No 147
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.87 E-value=9e-09 Score=100.67 Aligned_cols=53 Identities=15% Similarity=0.245 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 254 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 254 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.+.+++.|++|++++.|++|.. ++.+..|++.+|+++.+|.||+|+|...
T Consensus 189 ~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 189 AWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 3456677888999999999999985 3345568899998999999999999864
No 148
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.85 E-value=1.1e-08 Score=98.33 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
-||+|||||++|++||..|++.| +|+|+|+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 59999999999999999999999 9999998864
No 149
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.84 E-value=3.2e-08 Score=98.66 Aligned_cols=41 Identities=32% Similarity=0.440 Sum_probs=37.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
++||+|||||++|++||++|++.|++|+|+|+++..+|.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 57999999999999999999999999999999987766543
No 150
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.83 E-value=1.9e-08 Score=103.26 Aligned_cols=38 Identities=21% Similarity=0.278 Sum_probs=34.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+.++||+|||||++||+||+.|++. |++|+|+|+++..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4568999999999999999999998 8999999998755
No 151
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.83 E-value=1.3e-08 Score=100.20 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=37.1
Q ss_pred HHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 258 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 258 ~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
+.+++.|++++++++|+.|+. + +.. |.+.+|+++.+|+||+|+|..
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~-~-~~~--v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINR-D-RQQ--VILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEET-T-TTE--EEETTSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEeCCEEEEEEC-C-CCE--EEECCCCEEECCEEEEcCCCC
Confidence 344667899999999999985 2 333 777788889999999999984
No 152
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.83 E-value=1.7e-08 Score=100.89 Aligned_cols=41 Identities=37% Similarity=0.420 Sum_probs=36.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
.++||+|||||++|+++|+.|++.|++|+|+|+++..+|.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 35899999999999999999999999999999987776544
No 153
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.83 E-value=1.4e-08 Score=99.12 Aligned_cols=35 Identities=37% Similarity=0.420 Sum_probs=32.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~~~ 92 (508)
+||+|||||++|++||+.|++.|+ +|+|+|+++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 689999999999999999999998 89999998743
No 154
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.82 E-value=2.5e-08 Score=99.62 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
++||+|||||++|++||..|++. |.+|+|+|+++..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 57999999999999999999996 8999999998754
No 155
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.82 E-value=5.5e-09 Score=104.03 Aligned_cols=41 Identities=34% Similarity=0.358 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
++||+|||||++|++||..|++.|++|+|+|+++..+|.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 48999999999999999999999999999998888877654
No 156
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.82 E-value=1.5e-08 Score=98.34 Aligned_cols=52 Identities=19% Similarity=0.236 Sum_probs=42.2
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+++.|++|+++++|++|+.+++ .+.|++.+|+++.+|.||+|+|...
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecCC--EEEEEECCCCEEECCEEEECcCCCc
Confidence 456667788999999999999986433 2357888888899999999999754
No 157
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.82 E-value=8.4e-08 Score=96.64 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.++||+|||||++|++||..|++.|++|+|+|+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 56899999999999999999999999999999864
No 158
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.81 E-value=8e-09 Score=102.40 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+++||+|||||++|++||+.|++. |++|+|+|+++..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 357999999999999999999998 8899999998754
No 159
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.80 E-value=5.7e-09 Score=104.59 Aligned_cols=56 Identities=11% Similarity=-0.078 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCC------cEEEEEEcCC-----cEEEccEEEEccCh
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG------TVKNFLLTNG-----NVIDGDAYVFATPV 306 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g------~~~~V~~~~g-----~~i~ad~VI~A~~~ 306 (508)
++.+.|...+++.+..|+++++|++|+..+++ ..+.|++.++ +++.|++||+|+|.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 34444444455556789999999999875432 2456776543 36899999999994
No 160
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.79 E-value=3.3e-08 Score=98.74 Aligned_cols=38 Identities=29% Similarity=0.340 Sum_probs=34.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLV 93 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~ 93 (508)
+++||+|||||++|++||+.|++.|++|+|+|+++..+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~g 39 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKE 39 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccC
Confidence 56999999999999999999999999999999987443
No 161
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.77 E-value=5.8e-08 Score=97.04 Aligned_cols=41 Identities=34% Similarity=0.412 Sum_probs=36.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
.++||+|||||++|++||+.|++.|++|+|+|+++..+|.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 35899999999999999999999999999999987776543
No 162
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.76 E-value=5.6e-08 Score=96.48 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=34.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
++||+|||||++|++||..|++.|++|+|+|++ ..+|.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~ 40 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGV 40 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCc
Confidence 589999999999999999999999999999998 45443
No 163
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.76 E-value=5.9e-08 Score=96.07 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=32.3
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+||+|||||++|++||..|++. |++|+|+|+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4899999999999999999998 9999999998754
No 164
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.76 E-value=3.1e-08 Score=99.21 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=33.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC---CceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG---HKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g---~~V~vlE~~~~~ 92 (508)
.++||+|||||++|++||..|++.| .+|+|+|+++.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 3589999999999999999999988 999999998744
No 165
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.76 E-value=1.9e-08 Score=99.78 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=32.8
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+||+|||||++|++||+.|++. |++|+|+|+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999998 8999999998754
No 166
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.75 E-value=2e-08 Score=98.34 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=35.1
Q ss_pred CCCC-CCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 010539 449 LQRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 491 (508)
Q Consensus 449 ~~~~-~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~ 491 (508)
.+++ ..+|||.+||.+....+.....|...|..+|+.|...++
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 4455 689999999999743335778899999999999999883
No 167
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.75 E-value=8.6e-08 Score=95.66 Aligned_cols=41 Identities=27% Similarity=0.379 Sum_probs=37.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
.++||+|||||++|++||..|++.|++|+|+|+++..+|.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 56899999999999999999999999999999998776654
No 168
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.75 E-value=1.9e-08 Score=99.27 Aligned_cols=35 Identities=37% Similarity=0.595 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHH---cCCceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~---~g~~V~vlE~~~~ 91 (508)
++||+|||||++|++||+.|++ .|++|+|+|+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 5799999999999999999999 7999999998863
No 169
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.75 E-value=4.1e-08 Score=97.73 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g 94 (508)
++||+|||||++|++||..|++.|++|+|+|++ ..+|
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG 39 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGG 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCC
Confidence 479999999999999999999999999999998 4443
No 170
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.74 E-value=1.5e-08 Score=99.73 Aligned_cols=36 Identities=31% Similarity=0.471 Sum_probs=32.9
Q ss_pred CCeEEEECCChHHHHHHHHHHH--cCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~--~g~~V~vlE~~~~~ 92 (508)
++||+|||||++|+++|+.|++ .|++|+|+|+++..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 3699999999999999999999 78999999998654
No 171
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.74 E-value=8.8e-08 Score=95.91 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEec
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~ 88 (508)
..++||+|||||++|++||..|++.|++|+|+|+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 3568999999999999999999999999999998
No 172
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.74 E-value=1.7e-08 Score=99.31 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcC--CceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g--~~V~vlE~~~~ 91 (508)
++|||||||++|++||..|++.+ ++|+|+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 57999999999999999999875 79999998864
No 173
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.74 E-value=3.7e-08 Score=96.87 Aligned_cols=53 Identities=17% Similarity=0.225 Sum_probs=43.2
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEc-CCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~-~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.+++.|++|++++.|++|..+ +++.+..|.+.+|+++.+|.||+|+|...
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 556667789999999999999852 24556678888898899999999999753
No 174
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.73 E-value=6.4e-08 Score=99.01 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.5
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+||+|||||++||+||+.|++. |++|+|+|+++..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 6899999999999999999998 8899999998754
No 175
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.73 E-value=8.6e-08 Score=93.56 Aligned_cols=48 Identities=25% Similarity=0.281 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+++.|++|+++++|++|+ + + .|++.+|+++.+|.||+|+|...
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECCCCEEEcCEEEECcCCCc
Confidence 35566778899999999999998 2 3 37788888899999999999753
No 176
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.71 E-value=3.6e-08 Score=97.76 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=32.4
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+||+|||||++|++||..|++. |++|+|+|+++.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 9999999998744
No 177
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.71 E-value=6.9e-08 Score=96.19 Aligned_cols=40 Identities=25% Similarity=0.436 Sum_probs=35.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
.++||+|||||++|++||++|++.|++|+|+|++ ..+|.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~ 42 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTC 42 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccc
Confidence 4689999999999999999999999999999998 555543
No 178
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.71 E-value=8.7e-08 Score=95.10 Aligned_cols=41 Identities=27% Similarity=0.315 Sum_probs=36.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
++||+|||||++|++||..|++.|++|+|+|+++..+|.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 37999999999999999999999999999999977766543
No 179
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.70 E-value=4.6e-08 Score=97.66 Aligned_cols=41 Identities=34% Similarity=0.528 Sum_probs=36.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
.++||+|||||++|++||+.|++.|++|+|+|++ ..+|.+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 4689999999999999999999999999999997 4555443
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.70 E-value=5.6e-08 Score=96.21 Aligned_cols=55 Identities=20% Similarity=0.219 Sum_probs=40.7
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l 312 (508)
.+.+.+++.|++|+++++|++|+.+ +.++.|.+ +|.++.+|.||+|+|...-..+
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~ 250 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVRPNTAW 250 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEEESCGG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCCCChHH
Confidence 3556677889999999999999853 43434666 4557999999999997543333
No 181
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.69 E-value=3.5e-08 Score=98.42 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
++||+|||||++||+||+.|+++ |++|+|||+++..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 9999999998754
No 182
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.69 E-value=2.6e-07 Score=91.69 Aligned_cols=40 Identities=28% Similarity=0.490 Sum_probs=35.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
+++||+|||||++|++||.+|++.|++|+|+|++ ..+|.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTC 42 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcC
Confidence 4689999999999999999999999999999998 455543
No 183
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.69 E-value=5.8e-08 Score=96.25 Aligned_cols=57 Identities=19% Similarity=0.202 Sum_probs=43.1
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhc
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 313 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll 313 (508)
.+.+.+++.|++|+++++|++|+. +++.+..|.+ +|+++.+|.||+|+|...-..++
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEECCGGG
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHH
Confidence 356667888999999999999985 3555544555 67789999999999975433343
No 184
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.68 E-value=5.7e-08 Score=94.86 Aligned_cols=36 Identities=31% Similarity=0.290 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~~ 91 (508)
.++||+|||||++|++||+.|++.|+ +|+|+|+++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 56899999999999999999999998 5999998764
No 185
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.68 E-value=1e-07 Score=94.39 Aligned_cols=55 Identities=13% Similarity=0.085 Sum_probs=43.0
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l 312 (508)
.+.+.+++.|++|+++++|++|+. +++.+ .|.+.+| ++.+|.||+|+|...-..+
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~ 248 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQ-EISCDSGIFALNLHPQLAY 248 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSC-EEEESEEEECSCCBCCCSS
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCC-EEEeCEEEECcCCCCChHH
Confidence 466677888999999999999986 34444 6778777 7999999999997543333
No 186
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.68 E-value=4.4e-08 Score=98.29 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=46.1
Q ss_pred cchHHHHHHHHHcC-CEEEeCceeeEEEEcCCC-cEEEEEEc--CC-----cEEEccEEEEccChHHHhhh
Q 010539 251 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 251 ~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g-~~~~V~~~--~g-----~~i~ad~VI~A~~~~~~~~l 312 (508)
.....++..+++.| ++|++++.|++|..++++ ++++|.+. +| .+++|+.||+|+|.....+|
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 44455666666665 999999999999985545 67888874 45 36889999999998755444
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.67 E-value=8.5e-08 Score=96.02 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+++.|++|++++.|++|+. ++.+..|.+ +|+++.+|.||+|+|...
T Consensus 241 ~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 241 LMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 355667788999999999999985 344434556 667899999999998754
No 188
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.67 E-value=3.7e-07 Score=91.58 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcC-CEEEeCceeeEEEEcCCC-cEEEEEEc--CC-----cEEEccEEEEccChHHHhhh
Q 010539 251 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 251 ~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g-~~~~V~~~--~g-----~~i~ad~VI~A~~~~~~~~l 312 (508)
.....+++.+++.| ++|++++.|++|..++++ ++++|.+. +| .+++|+.||+|+|.....+|
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 44455666666675 999999999999985434 68888874 55 36899999999998755444
No 189
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.66 E-value=4.8e-07 Score=90.44 Aligned_cols=34 Identities=29% Similarity=0.376 Sum_probs=31.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEec
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~ 88 (508)
..++||+|||||++|++||++|++.|++|+|+|+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 3568999999999999999999999999999995
No 190
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.65 E-value=2.2e-07 Score=92.10 Aligned_cols=41 Identities=24% Similarity=0.332 Sum_probs=35.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
.++||+|||||++|++||.+|++.|++|+|+|+ +..+|.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 458999999999999999999999999999999 55655443
No 191
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.64 E-value=4.7e-08 Score=98.17 Aligned_cols=38 Identities=26% Similarity=0.393 Sum_probs=34.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHc---CCceEEEeccccCCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLVGA 95 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~---g~~V~vlE~~~~~~g~ 95 (508)
++||+|||||++|++||++|++. |++|+|+|+++ .+|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~ 42 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGA 42 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCc
Confidence 47999999999999999999999 99999999988 5554
No 192
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.63 E-value=7.7e-08 Score=96.18 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=44.5
Q ss_pred cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC----cEEEccEEEEccCh
Q 010539 249 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG----NVIDGDAYVFATPV 306 (508)
Q Consensus 249 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g----~~i~ad~VI~A~~~ 306 (508)
+..+.+.+.+.|++.|++|++++.|++|+ +++.+..+...+| +++.||.||+|+|.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 45677788889999999999999999996 4554444555666 36999999999985
No 193
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.63 E-value=1.6e-07 Score=93.25 Aligned_cols=54 Identities=19% Similarity=0.221 Sum_probs=42.0
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhh
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 311 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ 311 (508)
+.+.+++.|++|+++++|++|+.++++ +.+.+.+|+++.+|.||+|+|...-..
T Consensus 214 l~~~l~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 214 AERVFKKQGLTIRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEECCT
T ss_pred HHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 455667789999999999999864332 346777788899999999999865433
No 194
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.63 E-value=2.6e-07 Score=90.96 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcC--CceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g--~~V~vlE~~~~~ 92 (508)
++|||||||++|++||..|++.| .+|+|+|+++..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 36999999999999999999987 579999988654
No 195
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.63 E-value=1.8e-07 Score=93.34 Aligned_cols=51 Identities=20% Similarity=0.322 Sum_probs=41.9
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+++.|++|+++++|++|+. +++.+. |++.+|+++.+|.||+|+|..
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 456677888999999999999986 355543 777888889999999999975
No 196
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.63 E-value=3.8e-07 Score=91.24 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-cCCceEEEe
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE 87 (508)
.++||+|||||++|++||++|++ .|++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 45899999999999999999999 999999999
No 197
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.62 E-value=3.2e-07 Score=91.13 Aligned_cols=37 Identities=30% Similarity=0.449 Sum_probs=34.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g 94 (508)
++||+|||||++|++||..|++.|++|+|+|+++ .+|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG 42 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGG 42 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCC
Confidence 5899999999999999999999999999999987 444
No 198
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.62 E-value=1.1e-07 Score=94.22 Aligned_cols=41 Identities=29% Similarity=0.385 Sum_probs=35.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP 97 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~ 97 (508)
.++||+|||||++|++||++|++.|++|+|+|++ ..+|.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 3589999999999999999999999999999998 4555443
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.61 E-value=2.7e-07 Score=92.13 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=41.7
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC-cEEEccEEEEccChH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVD 307 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g-~~i~ad~VI~A~~~~ 307 (508)
+.+.+++.|++|+++++|++|+.++++.+..|++.+| +++.+|.||+|+|..
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 5566678899999999999998644443346888888 789999999999964
No 200
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.61 E-value=3.1e-07 Score=91.88 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-cCCceEEEe
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE 87 (508)
.++||+|||||++|++||++|++ .|++|+|+|
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 35899999999999999999999 999999999
No 201
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.59 E-value=3.1e-07 Score=90.83 Aligned_cols=52 Identities=21% Similarity=0.312 Sum_probs=41.9
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.+++.|++|+++++|++|+.++++. +.|++.+|+++.+|.||+|+|...
T Consensus 214 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 214 LVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 5566677899999999999998744443 357888888899999999998753
No 202
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.59 E-value=1.1e-07 Score=96.60 Aligned_cols=58 Identities=7% Similarity=0.004 Sum_probs=43.8
Q ss_pred HHHHHHHHH-cCCEEEeCceeeEEEEcCCCcEEEEEEcC---Cc--EE---EccEEEEccChHHHhhh
Q 010539 254 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 312 (508)
Q Consensus 254 ~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~~~~V~~~~---g~--~i---~ad~VI~A~~~~~~~~l 312 (508)
..+++.+.+ .+++|++++.|++|.. +++++++|.+.+ |+ ++ .++.||+|+|......|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 346666665 4899999999999998 456788888865 53 34 78999999999655444
No 203
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.59 E-value=4.8e-07 Score=91.46 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHc-CCceEEEeccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~-g~~V~vlE~~~ 90 (508)
.+.+|+||||||.+|+.+|.+|++. +.+|+|||+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3579999999999999999999986 89999999987
No 204
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.58 E-value=1.2e-06 Score=89.76 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=35.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g 94 (508)
..+||+|||||++|++||+.|++.|++|+|||+.+..+|
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 358999999999999999999999999999999987765
No 205
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.56 E-value=6.8e-08 Score=96.65 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=34.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+.++||+|||||++|++||..|++. |.+|+|+|+++..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 4568999999999999999999887 8899999998755
No 206
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.55 E-value=5.1e-07 Score=90.62 Aligned_cols=56 Identities=16% Similarity=0.190 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l 312 (508)
.+.+.+++.|++|+++++|++|+.++++ + .|.+.+|+++.+|.||+|+|...-..+
T Consensus 228 ~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 228 VLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 3566778889999999999999874333 3 477778888999999999998754444
No 207
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.54 E-value=3.1e-07 Score=89.59 Aligned_cols=42 Identities=24% Similarity=0.116 Sum_probs=33.5
Q ss_pred CCCCCceEEecccccCC-CCCcHHHHHHHHHHHHHHHHHHHHH
Q 010539 451 RSPVEGFYLAGDYTKQK-YLASMEGAVLSGKLCAQAIVQDYVL 492 (508)
Q Consensus 451 ~~~~~~l~~aG~~~~~~-~~~~~~gA~~sg~~aA~~il~~l~~ 492 (508)
.+..+|||-+||.+... .+.....|...|..+|++|+..+..
T Consensus 283 ~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G 325 (401)
T 3vrd_B 283 SSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKG 325 (401)
T ss_dssp BSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 35689999999987532 3346788999999999999998854
No 208
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.54 E-value=4.6e-07 Score=89.95 Aligned_cols=51 Identities=20% Similarity=0.321 Sum_probs=41.7
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCc-EEEccEEEEccChHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDI 308 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~-~i~ad~VI~A~~~~~ 308 (508)
+.+.+++.|++|+++++|++|+.++++ ..|++.+|+ ++.+|.||+|+|...
T Consensus 213 l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 213 LAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 555667889999999999999864444 357888898 899999999999754
No 209
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.53 E-value=4.8e-07 Score=89.87 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=39.8
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc-C--Cc--EEEccEEEEccChHHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPVDIL 309 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~-~--g~--~i~ad~VI~A~~~~~~ 309 (508)
+.+.+++.|++|+++++|++|+.++ +.+ .|++. + |+ ++.+|.||+|+|...-
T Consensus 216 l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 216 LRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred HHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 5566678899999999999998643 322 46654 5 75 7999999999997543
No 210
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.52 E-value=5.6e-07 Score=89.72 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 368999999999999999999999999999988654
No 211
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.51 E-value=5.3e-07 Score=90.03 Aligned_cols=36 Identities=25% Similarity=0.480 Sum_probs=33.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcc
Confidence 368999999999999999999999999999988754
No 212
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.51 E-value=1.6e-07 Score=90.94 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC--CceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g--~~V~vlE~~~ 90 (508)
.++||+|||||++|++||..|++.| .+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999998 4689999775
No 213
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.51 E-value=5.6e-08 Score=91.92 Aligned_cols=41 Identities=32% Similarity=0.367 Sum_probs=36.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHH--cCCceEEEeccccCCCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~--~g~~V~vlE~~~~~~g~~ 96 (508)
..+||+|||||++||+||++|++ .|++|+|||+++.++|..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~ 106 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceE
Confidence 45799999999999999999986 499999999999887754
No 214
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.51 E-value=7.5e-07 Score=89.15 Aligned_cols=53 Identities=25% Similarity=0.362 Sum_probs=42.7
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+++.|++|+++++|++|..++++. +.|++.+|+++.+|.||+|+|...
T Consensus 240 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 240 EVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcc
Confidence 35666788899999999999998643333 357888888899999999999754
No 215
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=7.7e-07 Score=89.24 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=42.9
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcE-EEccEEEEccChHHHh
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVDILK 310 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~-i~ad~VI~A~~~~~~~ 310 (508)
+.+.+++.|++|++++.|++|+.++++. ..|++.+|++ +.+|.||+|+|...-.
T Consensus 223 l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCC
Confidence 5666788899999999999998644443 3577888877 9999999999975433
No 216
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.50 E-value=6.1e-07 Score=89.29 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=40.8
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHh
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK 310 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~ 310 (508)
.+.+.+++.|++|+++++|++|+.+ ++ .+.|.+. +.++.+|.||+|+|...-.
T Consensus 221 ~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 221 AVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 3566678889999999999999863 33 3356776 4579999999999986443
No 217
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.50 E-value=7.4e-07 Score=89.10 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=43.2
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
.+.+.+++.|++|+++++|++|+.++++. +.|++.+|+++.+|.||+|+|...-
T Consensus 236 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 236 QLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCcC
Confidence 35666788899999999999998743333 3578888888999999999997543
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.49 E-value=4.3e-07 Score=92.85 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+..
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 368999999999999999999999999999987644
No 219
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=2.4e-07 Score=92.90 Aligned_cols=39 Identities=26% Similarity=0.413 Sum_probs=34.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
++||+|||||++|++||..|++.|++|+|+|++. .+|.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccc
Confidence 4899999999999999999999999999999985 44443
No 220
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.47 E-value=5e-07 Score=97.50 Aligned_cols=39 Identities=33% Similarity=0.539 Sum_probs=35.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
.+||+|||||++|++||..|++.|++|+|||+++..+|.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~ 166 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGT 166 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCce
Confidence 579999999999999999999999999999998876554
No 221
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.46 E-value=4.6e-07 Score=90.44 Aligned_cols=54 Identities=13% Similarity=0.035 Sum_probs=40.9
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l 312 (508)
+.+.+++.|++|+++++|++|+. ++.+..|.+.+ .++.+|.||+|+|...-..+
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~-~~i~~D~vi~a~G~~p~~~~ 286 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKG--NERVEAVETDK-GTYKADLVLVSVGVKPNTDF 286 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETT-EEEECSEEEECSCEEESCGG
T ss_pred HHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECC-CEEEcCEEEECcCCCcChHH
Confidence 55667788999999999999985 34455566654 47999999999997643333
No 222
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.45 E-value=7.6e-07 Score=88.30 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 378999999999999999999999999999988644
No 223
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.45 E-value=1.1e-06 Score=87.32 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=39.8
Q ss_pred HHHHHH-HHcCCEEEeCceeeEEEEcCCCcEEEEEEc--CC--cEEEccEEEEccChHHHhh
Q 010539 255 PIVEHI-QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVDILKL 311 (508)
Q Consensus 255 ~l~~~l-~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~--~g--~~i~ad~VI~A~~~~~~~~ 311 (508)
.+.+.+ ++.|++|+++++|++|+.++++ + .|.+. +| +++.+|.||+|+|...-..
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 356667 7889999999999999874333 2 35554 56 5799999999999764333
No 224
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.41 E-value=1e-06 Score=88.44 Aligned_cols=56 Identities=11% Similarity=-0.045 Sum_probs=43.7
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhh
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~l 312 (508)
.+.+.+++.|++|++++.|.++...++ .+ .|.+.++.++.+|.|++|+|-..-...
T Consensus 268 ~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~-~v~~~~~~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 268 KVKLYMEEQGVMFKNGILPKKLTKMDD-KI-LVEFSDKTSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEETT-EE-EEEETTSCEEEESEEEECSCEEESCGG
T ss_pred HHHHHHHhhcceeecceEEEEEEecCC-eE-EEEEcCCCeEEEEEEEEcccccCCccc
Confidence 466777889999999999999997433 33 477778888999999999987543333
No 225
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.41 E-value=2.3e-06 Score=86.59 Aligned_cols=37 Identities=24% Similarity=0.334 Sum_probs=34.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc-CCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~-g~~V~vlE~~~~~ 92 (508)
..+|+||||||++|+++|++|++. |.+|+|||++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 468999999999999999999998 8999999998765
No 226
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.41 E-value=6.5e-07 Score=89.41 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=41.4
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC----CcEEEccEEEEccChHHHhhh
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVDILKLQ 312 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~----g~~i~ad~VI~A~~~~~~~~l 312 (508)
+.+.+++.|++|++++.|++|+.++++ ..|++.+ |+++.+|.||+|+|...-..+
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~ 290 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKL 290 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEEECGGG
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCcCCCC
Confidence 555667789999999999999864332 3466665 667999999999997644443
No 227
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.40 E-value=1.8e-06 Score=84.85 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 254 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 254 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.+.+++.|+++++++.|++++ .+ .|++.+|+++.+|.||+|+|...
T Consensus 192 ~~~~~~l~~~gV~i~~~~~v~~~~--~~----~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 192 QPILDELDKREIPYRLNEEINAIN--GN----EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp HHHHHHHHHTTCCEEESCCEEEEE--TT----EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHhhccceEEEeccEEEEec--CC----eeeecCCeEEeeeeEEEEeceec
Confidence 346667788999999999999986 33 27788999999999999999653
No 228
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.40 E-value=1.8e-06 Score=85.80 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 368999999999999999999999999999988654
No 229
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.39 E-value=9.9e-07 Score=88.98 Aligned_cols=36 Identities=31% Similarity=0.387 Sum_probs=33.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
.++|+||||||.+|+.+|.+|++ |.+|+|||++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 56999999999999999999999 9999999998764
No 230
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=1.1e-06 Score=86.98 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 368999999999999999999999999999988644
No 231
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.38 E-value=1.9e-06 Score=86.54 Aligned_cols=34 Identities=29% Similarity=0.462 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+||+||||||++|++||.++++.|.+|+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4899999999999999999999999999999754
No 232
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=1.1e-06 Score=84.41 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=32.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
.+|+|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 68999999999999999999999999999988644
No 233
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.34 E-value=2.2e-06 Score=85.74 Aligned_cols=51 Identities=24% Similarity=0.345 Sum_probs=41.7
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 308 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~ 308 (508)
+.+.++++|++|++++.|++|+.+ ++.+ .|++.+|+++.+|.||+|+|...
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCc
Confidence 556667889999999999999863 3433 58888898899999999999754
No 234
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.33 E-value=2.4e-07 Score=100.75 Aligned_cols=39 Identities=31% Similarity=0.474 Sum_probs=35.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~~~~g 94 (508)
..+||+|||||++||+||+.|++.|+ +|+|+|+.+..+|
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc
Confidence 46899999999999999999999999 7999999877655
No 235
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.33 E-value=7.6e-06 Score=84.03 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 35689999999999999999999999999999973
No 236
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.31 E-value=4.3e-06 Score=78.63 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=39.5
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC----C--cEEEccEEEEccChH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPVD 307 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~----g--~~i~ad~VI~A~~~~ 307 (508)
+.+.+++.|++|+++++|++|..+ ++.+.+|++.+ | +++.+|.||+|+|..
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 445567789999999999999863 44565666654 4 579999999999875
No 237
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=2e-06 Score=85.71 Aligned_cols=36 Identities=28% Similarity=0.460 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 368999999999999999999999999999988644
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.29 E-value=3.3e-06 Score=86.57 Aligned_cols=49 Identities=27% Similarity=0.369 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+++.|++|+++++|++|+.+ ++ +|++.+|+++.+|.||+|+|..
T Consensus 233 ~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 233 YVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCC
Confidence 3566677889999999999999853 22 3777888889999999999863
No 239
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.29 E-value=5.2e-06 Score=82.79 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC---cEEEccEEEEccChHH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDI 308 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g---~~i~ad~VI~A~~~~~ 308 (508)
.+.+.+++.|++|+++++|++|+.++++ + .|++.++ +++.+|.||+|+|...
T Consensus 226 ~l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 226 EAQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 3556677889999999999999974433 3 3555543 5799999999999754
No 240
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.27 E-value=3.1e-06 Score=85.43 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH-cCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE~~~~~ 92 (508)
.+|+||||||.+|+.+|.+|++ .|++|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999 59999999998755
No 241
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.26 E-value=5.4e-06 Score=82.99 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+..|..|++.|.+|+|+|+.+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 468999999999999999999999999999987644
No 242
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.25 E-value=4.1e-06 Score=82.87 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
...+|+|||+|.+|+.+|..|++.|.+|+|+|+.++.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 3468999999999999999999999999999988644
No 243
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.25 E-value=6.5e-06 Score=82.28 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 468999999999999999999999999999988754
No 244
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.22 E-value=1.1e-06 Score=86.73 Aligned_cols=41 Identities=32% Similarity=0.377 Sum_probs=37.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
...+||+|||||++||+||+.|++.|++|+|+|+.+..+|.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~ 160 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL 160 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe
Confidence 45689999999999999999999999999999999887653
No 245
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.19 E-value=3e-07 Score=88.75 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 368999999999999999999999999999988754
No 246
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.19 E-value=9.3e-06 Score=76.30 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+..|..|++.|.+|+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 4689999999999999999999999999998765
No 247
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.18 E-value=8.9e-06 Score=77.04 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 346899999999999999999999999999997753
No 248
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.17 E-value=1.7e-05 Score=79.21 Aligned_cols=53 Identities=17% Similarity=0.093 Sum_probs=40.3
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCc-----EEEccEEEEccChHHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPVDIL 309 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~-----~i~ad~VI~A~~~~~~ 309 (508)
+.+.+++.|++|++++.|++|..++++.+ .|++.+++ ++.+|.||+|+|....
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccC
Confidence 55667788999999999999987545443 36655543 7999999999997543
No 249
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.16 E-value=2e-06 Score=90.16 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=48.1
Q ss_pred CCCCCCcchhhhccccCCC--CCCCCCCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC
Q 010539 30 PDIDNTSNFLEAAYLSSSF--RTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY 96 (508)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~ 96 (508)
+...|..|+....+..... ...+.....+||+|||||++||+||+.|+++|++|+|+|+++.++|..
T Consensus 360 ~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~ 428 (729)
T 1o94_A 360 PPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHL 428 (729)
T ss_dssp SCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTH
T ss_pred CceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCee
Confidence 3445777775443321111 111223467899999999999999999999999999999998886653
No 250
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.14 E-value=1.2e-05 Score=76.07 Aligned_cols=51 Identities=14% Similarity=0.063 Sum_probs=39.1
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc---CC--cEEEccEEEEccChHH
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPVDI 308 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~---~g--~~i~ad~VI~A~~~~~ 308 (508)
+.+.+++.|+++++++.|++|.. + +.+..|++. +| +++.+|.||+|+|...
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~-~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEG-D-ERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEE-S-SSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHhccccCCeEEecCCcceeEcc-C-CCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 44455677999999999999986 3 444456665 66 5799999999999764
No 251
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.14 E-value=1.2e-06 Score=86.02 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.++||+|||||++||++|+.|+++|++|+|||++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 44799999999999999999999999999999876
No 252
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.10 E-value=3e-05 Score=76.98 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
...+|+|||||.+|+-+|..|++. |.+|+++++++..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 357899999999999999999999 8999999998754
No 253
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.09 E-value=2.1e-05 Score=73.53 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999999775
No 254
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.09 E-value=3.5e-05 Score=76.95 Aligned_cols=55 Identities=15% Similarity=0.095 Sum_probs=39.7
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC---Cc--EEEccEEEEccChHHHhh
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPVDILKL 311 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~---g~--~i~ad~VI~A~~~~~~~~ 311 (508)
+.+.+++.|++|++++.|++|...+++.+ .|++.+ |+ ++.+|.||+|+|...-..
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 55667788999999999999987444433 354433 54 478999999999754333
No 255
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.09 E-value=2.4e-05 Score=73.16 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4789999999999999999999999999998775
No 256
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.07 E-value=1.5e-05 Score=76.34 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++++.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 46899999999999999999999999999998753
No 257
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.07 E-value=2.3e-06 Score=82.69 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.6
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~~ 92 (508)
+||+|||||++||++|+.|+++ |++|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998754
No 258
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.06 E-value=2.6e-05 Score=73.41 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3789999999999999999999999999999775
No 259
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.05 E-value=1.3e-06 Score=87.43 Aligned_cols=73 Identities=12% Similarity=-0.013 Sum_probs=49.4
Q ss_pred cCCeEEeecCCc------cccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEc--CC--cEEEccEEEEccCh
Q 010539 237 HGSKMAFLDGNP------PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 306 (508)
Q Consensus 237 ~g~~~~~~~g~~------~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~--~g--~~i~ad~VI~A~~~ 306 (508)
.|..+.++.... ...+.+.+.+.+++. ++|++++.|++|+.++++ + .|++. +| +++.+|.||+|+|.
T Consensus 196 ~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 196 LGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-V-EVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp TTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-E-EEEEECTTCCEEEEEESEEEECSCC
T ss_pred cCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-E-EEEEEeCCCceEEEECCEEEEeeCC
Confidence 455665554331 245566677777777 999999999999874443 3 25553 56 67999999999987
Q ss_pred HHHhhh
Q 010539 307 DILKLQ 312 (508)
Q Consensus 307 ~~~~~l 312 (508)
..-..+
T Consensus 273 ~p~~~~ 278 (492)
T 3ic9_A 273 KANVDK 278 (492)
T ss_dssp EESCSS
T ss_pred ccCCCC
Confidence 543333
No 260
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.03 E-value=6.8e-06 Score=85.47 Aligned_cols=61 Identities=23% Similarity=0.230 Sum_probs=45.6
Q ss_pred CCCCcchhhhccccCCCCCCCCCCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 32 IDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
..|..|+....+..... ++....+||+|||||++|++||..|+++|++|+|+|+++..+|.
T Consensus 351 ~~C~~np~~~~e~~~~~---~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 351 TSCLVNPRACHETKMPI---LPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp CCCSSCTTTTCTTTSCC---CSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTT
T ss_pred eEEEeCcccccccccCC---CCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCe
Confidence 34666665443322111 22345789999999999999999999999999999999887665
No 261
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.02 E-value=4.2e-06 Score=78.52 Aligned_cols=36 Identities=36% Similarity=0.339 Sum_probs=33.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
++||+|||||.+|+.||+.|+++|++|+|+|++...
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 379999999999999999999999999999998744
No 262
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.98 E-value=2.1e-05 Score=75.56 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++++..
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 468999999999999999999999999999987643
No 263
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.96 E-value=4.6e-05 Score=71.93 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 34789999999999999999999999999999775
No 264
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.95 E-value=4.6e-05 Score=71.24 Aligned_cols=34 Identities=35% Similarity=0.479 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 4789999999999999999999999999998775
No 265
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.93 E-value=9.8e-05 Score=74.22 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
.+++|||||.+|+..|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.92 E-value=6.7e-05 Score=70.38 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 478999999999999999999999999999977533
No 267
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.90 E-value=8.5e-05 Score=76.21 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
.+|+|||||.+|+.+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999976
No 268
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.88 E-value=6.9e-05 Score=75.57 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=41.1
Q ss_pred hHHHHHHHHHcCCEEEe--CceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHH
Q 010539 253 CLPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 309 (508)
Q Consensus 253 ~~~l~~~l~~~g~~i~~--~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~ 309 (508)
...+.+.+.+.+|++.. +++|++|+ ++| |.+.+| ++.+|.||+|||....
T Consensus 341 ~~~y~~al~~~nV~lv~~~~~~I~~it--~~g----v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 341 ETNYYETYNRDNVHLVDIREAPIQEVT--PEG----IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEE--TTE----EEESSC-EEECSEEEECCCCBSS
T ss_pred CccHHHHhcCCCEEEEecCCCCceEEc--cCe----EEeCCC-eeecCEEEECCccccc
Confidence 34577788778899986 88999997 454 788999 8999999999999753
No 269
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.85 E-value=4.8e-05 Score=71.94 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|.+|+..|..|++.|.+|+++++++
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 34789999999999999999999999999998775
No 270
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.85 E-value=5e-05 Score=75.35 Aligned_cols=36 Identities=33% Similarity=0.467 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.++.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 468999999999999999999999999999987644
No 271
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.83 E-value=6.5e-05 Score=70.79 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999998775
No 272
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.82 E-value=8.3e-05 Score=74.74 Aligned_cols=36 Identities=31% Similarity=0.306 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|+|||||.+|+.+|..|++.|.+|+++++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 346899999999999999999999999999997653
No 273
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.82 E-value=0.00022 Score=71.79 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=34.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.+..
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQY 213 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 4579999999999999999999999999999999863
No 274
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.81 E-value=7.3e-05 Score=69.16 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=35.8
Q ss_pred HHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 257 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 257 ~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+++.|++|+. ++|++|.. ++ .|++.+|+++.+|.||+|+|..
T Consensus 181 ~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 181 HALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp HHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEE
T ss_pred HHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcc
Confidence 3445677999985 89999974 32 4788889889999999999865
No 275
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.79 E-value=1e-05 Score=81.75 Aligned_cols=37 Identities=32% Similarity=0.421 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-cCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE~~~~~ 92 (508)
.++|+||||||.+|+.+|.+|++ .|++|+|||++...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 47999999999999999999998 58999999998653
No 276
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.75 E-value=1.6e-05 Score=78.34 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=35.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-c------CCceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~-~------g~~V~vlE~~~~~~g 94 (508)
..+||+|||||++|++||..|++ . |++|+|+|+.+..+|
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 35799999999999999999999 7 999999999987654
No 277
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.72 E-value=8.9e-05 Score=80.07 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+|+|||+|..|+.+|..|++.|.+|+|+|+++
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999775
No 278
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.70 E-value=0.00016 Score=71.32 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHH--------------------HcCC-ceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLA--------------------DAGH-KPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~--------------------~~g~-~V~vlE~~~~~ 92 (508)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++++..
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 3578999999999999999999 5677 69999988754
No 279
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.69 E-value=2.9e-05 Score=76.60 Aligned_cols=39 Identities=26% Similarity=0.333 Sum_probs=35.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC--CceEEEeccccCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLVG 94 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g--~~V~vlE~~~~~~g 94 (508)
..+||+|||||++|+++|..|++.| ++|+|||+.+..+|
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCc
Confidence 4579999999999999999999998 99999999987754
No 280
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.68 E-value=2.1e-05 Score=79.54 Aligned_cols=36 Identities=33% Similarity=0.358 Sum_probs=33.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC-CceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g-~~V~vlE~~~~ 91 (508)
+.+|+||||||.||+.+|.+|++.| .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 5699999999999999999999997 79999999875
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.66 E-value=9.1e-05 Score=72.92 Aligned_cols=43 Identities=21% Similarity=0.252 Sum_probs=35.6
Q ss_pred CCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010539 452 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 496 (508)
Q Consensus 452 ~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~~~~ 496 (508)
+..++||.+||..... ..+..|+..|+.||+.|...|...+..
T Consensus 407 Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~~~~~ 449 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKAKAEA 449 (456)
T ss_dssp CSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 4557899999987753 678999999999999999999776544
No 282
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.62 E-value=6.8e-05 Score=58.85 Aligned_cols=104 Identities=10% Similarity=0.021 Sum_probs=56.0
Q ss_pred cEEEccEEEEccChHHHhhhcCcchhccHHHHHHhhcCCcCEEEEEEEecccccccccccccccCccceeeccccccccc
Q 010539 293 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKE 372 (508)
Q Consensus 293 ~~i~ad~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (508)
++++||+||+|+|+.+++.+...+..+....++++.+.+....|+++.|+++||+.-+. .+ +.+.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~-~g----------d~s~---- 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEA-DW----------KREL---- 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHH-HH----------HHHH----
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCc-cc----------cccC----
Confidence 36899999999999999988655556667788999999999999999999999975321 11 0000
Q ss_pred ccCCCccEEEEEe--cC-chhhcCCChHHHHHHHHHHHHHhCCC
Q 010539 373 YYNPNQSMLELVF--AP-AEEWISCSDSEIIDATMKELAKLFPD 413 (508)
Q Consensus 373 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 413 (508)
.+.+..++..+. +. +..|..++. +-.+.++..|.+++|+
T Consensus 69 -~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 69 -DAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp -HHHSTTHHHHHHHHCCCSCCCC---------------------
T ss_pred -CCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 000111222222 11 356666755 5578899999999996
No 283
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.60 E-value=0.0002 Score=66.79 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||||..|+.+|..|++.|.+|+|+|+..
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 34689999999999999999999999999999764
No 284
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.58 E-value=0.00042 Score=75.43 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
.+|+|||||.+|+-+|..|++.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999875
No 285
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.56 E-value=0.00021 Score=72.12 Aligned_cols=37 Identities=14% Similarity=0.319 Sum_probs=34.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..++|+|||+|.+|+.+|..|++.+.+|+|+++.+..
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 4578999999999999999999999999999999864
No 286
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.51 E-value=0.00028 Score=73.88 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=32.1
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIG--aG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+||| ||.+|+.+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 346899999 99999999999999999999999876
No 287
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.46 E-value=0.00042 Score=72.00 Aligned_cols=50 Identities=26% Similarity=0.303 Sum_probs=38.4
Q ss_pred HHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC--cEEEccEEEEccChHH
Q 010539 254 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 308 (508)
Q Consensus 254 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g--~~i~ad~VI~A~~~~~ 308 (508)
..+.+.+++.|+++++++.|++|+ +++ + .+. .+| +++.+|.||+|+|...
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG-L-HVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE-E-EEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe-E-EEe-cCCeEEEEeCCEEEECCCccc
Confidence 345677788999999999999997 344 2 233 566 5799999999999764
No 288
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.36 E-value=0.00011 Score=74.95 Aligned_cols=38 Identities=34% Similarity=0.448 Sum_probs=34.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHH-cCCceEEEeccccC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE~~~~~ 92 (508)
...+|+||||||.+|+++|++|++ .|++|+|||++...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 356899999999999999999999 79999999998755
No 289
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.30 E-value=0.00035 Score=68.79 Aligned_cols=37 Identities=24% Similarity=0.393 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--------------------CC-ceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------GH-KPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--------------------g~-~V~vlE~~~~~ 92 (508)
...+|+|||+|.+|+-+|..|++. |. +|+|++++...
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 357899999999999999999974 54 89999988755
No 290
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.15 E-value=0.0011 Score=65.63 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|+|||+|.+|+-.|..|++.|.+|+|+++++.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 357899999999999999999999999999997753
No 291
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.99 E-value=0.0022 Score=59.45 Aligned_cols=42 Identities=33% Similarity=0.298 Sum_probs=33.4
Q ss_pred CCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 010539 451 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 493 (508)
Q Consensus 451 ~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il~~l~~~ 493 (508)
++.+|+||-|||.+...+ ..+..|+.+|..||..|...|..+
T Consensus 261 ~Ts~p~IyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 261 RTSEKNIYLAGETTTQGP-SSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp BCSSTTEEECSHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeccCCCcc-hHHHHHHHHHHHHHHHHHHHHhhc
Confidence 566789999999886543 246778999999999999988654
No 292
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.96 E-value=0.0029 Score=61.43 Aligned_cols=47 Identities=19% Similarity=0.351 Sum_probs=38.6
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 307 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+++.|+++++++.|++|+ +++ |++.+|+++.+|.||+|+|..
T Consensus 223 ~~~~~l~~~gV~~~~~~~v~~i~--~~~----v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 223 AVASIYNQLGIKLVHNFKIKEIR--EHE----IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEC--SSE----EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHCCCEEEcCCceEEEC--CCe----EEECCCCEEeeeEEEECCCCC
Confidence 35566677899999999999996 332 677889899999999999864
No 293
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.87 E-value=0.0011 Score=61.72 Aligned_cols=38 Identities=18% Similarity=0.367 Sum_probs=34.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA 95 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~ 95 (508)
.+|+|||||..|+.+|..|++.|.+|+|+|+++.....
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQ 183 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcc
Confidence 68999999999999999999999999999999877543
No 294
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.84 E-value=0.005 Score=60.29 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=34.5
Q ss_pred HHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC-----CcEEEccEEEEccCh
Q 010539 256 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 306 (508)
Q Consensus 256 l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~-----g~~i~ad~VI~A~~~ 306 (508)
+.+.+++.|+++++++.|++|+ +++........+ ++++.+|.||+|+|.
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEE--TTEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 5566678899999999999997 343221111223 457999999999764
No 295
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.81 E-value=0.0034 Score=59.45 Aligned_cols=34 Identities=15% Similarity=0.308 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|.+|+.+|..|++.| +|++++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 3478999999999999999999998 699998774
No 296
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.80 E-value=0.0018 Score=52.22 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|+|||.|..|...|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 456899999999999999999999999999998753
No 297
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.77 E-value=0.004 Score=60.89 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcC----CcEEEccEEEEccChH
Q 010539 255 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVD 307 (508)
Q Consensus 255 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~----g~~i~ad~VI~A~~~~ 307 (508)
.+.+.+++.|+++++++.|++|+ +++ +++.+ |+++.+|.||+|+|..
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~--~~~----v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIE--PDK----VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEC--SSE----EEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEe--CCe----EEEEecCCCceEEeeeEEEECCCCc
Confidence 35667788899999999999996 333 33334 6789999999998653
No 298
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.69 E-value=0.013 Score=59.12 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
..++|+|||+|.+|+..|..|++.|.+|+++++.+..
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 4578999999999999999999999999999987643
No 299
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.61 E-value=0.0025 Score=52.39 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
....+|+|||+|..|...|..|.+.|++|++++++..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3557899999999999999999999999999998753
No 300
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.44 E-value=0.0028 Score=50.83 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999864
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.36 E-value=0.0036 Score=50.43 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 302
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.30 E-value=0.11 Score=51.52 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~ 90 (508)
..++|+|||+|.+|.-.|..|++. +.+|+++=++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 457899999999999999999986 67899987765
No 303
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.16 E-value=0.0044 Score=47.96 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC-CceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g-~~V~vlE~~~ 90 (508)
..+|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8999999864
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.09 E-value=0.0077 Score=49.22 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
..+|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 467999999999999999999999999999986
No 305
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.94 E-value=0.0064 Score=56.05 Aligned_cols=36 Identities=31% Similarity=0.391 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|.|||||..|...|..++..|++|+|+|..+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 456899999999999999999999999999997753
No 306
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.87 E-value=0.0079 Score=55.55 Aligned_cols=35 Identities=29% Similarity=0.480 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 44679999999999999999999999999999875
No 307
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.82 E-value=0.0087 Score=48.12 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999764
No 308
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.80 E-value=0.0091 Score=50.50 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc-CCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~-g~~V~vlE~~~ 90 (508)
...+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 356899999999999999999999 99999999875
No 309
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.54 E-value=0.016 Score=56.27 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=33.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
.+..+|.|||+|..|...|..|++.|++|+++|.++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3457899999999999999999999999999998765
No 310
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.53 E-value=0.011 Score=58.07 Aligned_cols=51 Identities=22% Similarity=0.220 Sum_probs=40.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCChhHHHHHHHcCCC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGIN 109 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~~~~~l~~~lg~~ 109 (508)
+.++|.|||.|.+|+++|..|+++|++|++.|.+... .....+.+++.|+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~---~~~~~~~L~~~gi~ 58 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD---ENPTAQSLLEEGIK 58 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG---GCHHHHHHHHTTCE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc---CChHHHHHHhCCCE
Confidence 4578999999999999999999999999999987532 12334556666764
No 311
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.48 E-value=0.0096 Score=58.18 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
.++|.|||.|.+|+++|..|+++|++|++.|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987654
No 312
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.37 E-value=0.027 Score=52.50 Aligned_cols=49 Identities=22% Similarity=0.260 Sum_probs=38.6
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHcCCceEEEeccccCCCCChhHHHHHHHcCCC
Q 010539 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGIN 109 (508)
Q Consensus 56 ~~~dVvIIGaG~aGls-aA~~L~~~g~~V~vlE~~~~~~g~~~~~~~l~~~lg~~ 109 (508)
..++|.|||.|.+|++ +|..|.++|++|++.|++.. +...+.+++.|+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~-----~~~~~~L~~~gi~ 52 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY-----PPMSTQLEALGID 52 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC-----TTHHHHHHHTTCE
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC-----cHHHHHHHhCCCE
Confidence 4578999999999997 78889999999999998753 2234556666764
No 313
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.33 E-value=0.016 Score=52.95 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 314
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.28 E-value=0.018 Score=50.86 Aligned_cols=36 Identities=22% Similarity=0.441 Sum_probs=32.0
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+.+.|+|.|| |..|...|..|+++|++|+++.++..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 5578999998 99999999999999999999998753
No 315
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.27 E-value=0.015 Score=53.79 Aligned_cols=36 Identities=31% Similarity=0.391 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+..+|.|||+|..|.+.|..|++.|++|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 446899999999999999999999999999998754
No 316
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.27 E-value=0.013 Score=51.15 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999865
No 317
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.22 E-value=0.021 Score=53.22 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~~ 91 (508)
+..+|+|||||..|.+.|..|++.|+ +|+++|....
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 44689999999999999999999998 9999998753
No 318
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.18 E-value=0.021 Score=52.83 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=33.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+.+|.|||.|..|...|..|++.|++|++++++..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3557899999999999999999999999999998753
No 319
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.11 E-value=0.031 Score=55.35 Aligned_cols=53 Identities=26% Similarity=0.431 Sum_probs=42.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCCh-----hHHHHHHHcCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYP-----NIQNLFGELGIN 109 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~~-----~~~~l~~~lg~~ 109 (508)
..+|+|||||.+|+.+|..|++.|.+|+|+++.+.+..... .+.+.+++.|++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVE 244 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCE
Confidence 36899999999999999999999999999999887654332 234556666654
No 320
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.02 E-value=0.019 Score=52.29 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+++|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999875
No 321
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.96 E-value=0.021 Score=53.87 Aligned_cols=35 Identities=31% Similarity=0.275 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45789999999999999999999999999999864
No 322
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.83 E-value=0.019 Score=51.58 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999999754
No 323
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.80 E-value=0.027 Score=52.43 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|.|||+|..|.+.|..|++.|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999864
No 324
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.80 E-value=0.029 Score=53.22 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|.+|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34789999999999999999999999999999875
No 325
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.76 E-value=0.032 Score=48.24 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998754
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.75 E-value=0.028 Score=48.78 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
+...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5678999999999999999999999999999864
No 327
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.66 E-value=0.03 Score=52.59 Aligned_cols=38 Identities=29% Similarity=0.492 Sum_probs=34.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccccC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVL 92 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~~~ 92 (508)
-+..+|+|+|||.+|..+|..|...|. +|+++|++..+
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli 224 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGII 224 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEEC
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcc
Confidence 466899999999999999999999999 99999988643
No 328
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.64 E-value=0.03 Score=52.68 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34789999999999999999999999999999875
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.63 E-value=0.031 Score=51.97 Aligned_cols=35 Identities=31% Similarity=0.404 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
+..+|+|||+|..|.+.|+.|++.|+ +|++++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999999 999999864
No 330
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.58 E-value=0.029 Score=55.17 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45899999999999999999999999999999864
No 331
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.53 E-value=0.036 Score=51.89 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
..+|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999975
No 332
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.52 E-value=0.028 Score=52.10 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|.|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999863
No 333
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.45 E-value=0.031 Score=51.80 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999764
No 334
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.45 E-value=0.036 Score=50.66 Aligned_cols=33 Identities=21% Similarity=0.185 Sum_probs=30.7
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+|.|||+|..|...|..|++.|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998753
No 335
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.44 E-value=0.039 Score=53.17 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=33.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+.+|.|||.|..||..|..|++.|++|+.+|-+..
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 3568999999999999999999999999999997653
No 336
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.43 E-value=0.035 Score=54.50 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 346899999999999999999999999999998753
No 337
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.42 E-value=0.041 Score=51.20 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-ceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~~ 91 (508)
..+|+|||||..|.+.|+.|++.|+ +|+++|.+..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3689999999999999999999999 9999998753
No 338
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.37 E-value=0.038 Score=51.79 Aligned_cols=37 Identities=32% Similarity=0.618 Sum_probs=33.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~~~ 92 (508)
+..+|+|+|||.+|..+|..|...|. +|+|+|+...+
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli 228 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGIL 228 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEEC
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 66899999999999999999999998 89999988544
No 339
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.34 E-value=0.033 Score=54.60 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCc-eEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~-V~vlE~~~~~ 92 (508)
...+|+|||+|.+|+-.|..|++.|.+ |+|+++++..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 357899999999999999999999999 9999987644
No 340
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.28 E-value=0.037 Score=50.76 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999874
No 341
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.26 E-value=0.039 Score=53.97 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc-CC-ceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~-g~-~V~vlE~~~~ 91 (508)
+.++|.|||+|..|+..|..|++. |+ +|+++|.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998875
No 342
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.24 E-value=0.063 Score=52.85 Aligned_cols=53 Identities=23% Similarity=0.406 Sum_probs=42.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----hhHHHHHHHcCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----PNIQNLFGELGIN 109 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----~~~~~l~~~lg~~ 109 (508)
..+++|||+|.+|+..|..|++.|.+|+++|+.+...... ..+.+.+++.|++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 227 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIR 227 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCE
Confidence 4689999999999999999999999999999988764332 2334556666654
No 343
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.19 E-value=0.041 Score=51.87 Aligned_cols=36 Identities=17% Similarity=0.352 Sum_probs=31.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345799999999999999999999999999999875
No 344
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.19 E-value=0.038 Score=51.36 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45789999999999999999999999999999875
No 345
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.15 E-value=0.052 Score=50.22 Aligned_cols=37 Identities=16% Similarity=0.216 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEecccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~~ 91 (508)
++..+|.|||+|..|.+.|+.|+..|+ +|+++|....
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 345799999999999999999999998 9999998653
No 346
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.12 E-value=0.046 Score=50.74 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
..+|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999875
No 347
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.10 E-value=0.039 Score=53.80 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
++|.|||+|..|+..|..|++.|++|++++++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5899999999999999999999999999998753
No 348
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.03 E-value=0.044 Score=50.90 Aligned_cols=34 Identities=44% Similarity=0.630 Sum_probs=29.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||+|..|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4578999999999999999999999999999 654
No 349
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.01 E-value=0.058 Score=46.83 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||+|..|...|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44689999999999999999999999999998764
No 350
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.00 E-value=0.045 Score=50.36 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
.+|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999864
No 351
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.00 E-value=0.047 Score=54.65 Aligned_cols=52 Identities=15% Similarity=0.284 Sum_probs=41.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----hhHHHHHHHcCCC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----PNIQNLFGELGIN 109 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----~~~~~l~~~lg~~ 109 (508)
.+++|||||.+|+.+|..|++.|.+|+|+|+.+...... ..+.+.+++.|+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~ 271 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGME 271 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcE
Confidence 789999999999999999999999999999998765432 2334555566654
No 352
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.99 E-value=0.061 Score=49.88 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
..+|+|||||..|...|..|+..|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3689999999999999999999998 999999765
No 353
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.99 E-value=0.052 Score=48.22 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 56789999999999999999999999999999764
No 354
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.91 E-value=0.048 Score=51.60 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999998764
No 355
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.90 E-value=0.06 Score=51.05 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
++.|+|||||..|..+|+.+.+.|++|+++|.++..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 468999999999999999999999999999987644
No 356
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.88 E-value=0.058 Score=52.35 Aligned_cols=37 Identities=19% Similarity=0.456 Sum_probs=33.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
...++.|||.|..|+..|..|++.|++|++++++...
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4578999999999999999999999999999988654
No 357
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.85 E-value=0.052 Score=49.98 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 44689999999999999999999999999999765
No 358
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.84 E-value=0.074 Score=49.01 Aligned_cols=34 Identities=35% Similarity=0.455 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~ 89 (508)
+..+|.|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45689999999999999999999999 99999987
No 359
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.79 E-value=0.055 Score=53.21 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+|.|||+|..|...|..|++.|++|+++|++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45799999999999999999999999999998754
No 360
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.73 E-value=0.05 Score=52.39 Aligned_cols=36 Identities=31% Similarity=0.530 Sum_probs=31.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
.+.++|.|||+|..|+..|..|++ |++|+++|.+..
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 355789999999999999999998 999999998753
No 361
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.70 E-value=0.065 Score=48.90 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
++|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998753
No 362
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.63 E-value=0.025 Score=55.42 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..++|+|+|+|-.|.+.|..|.+.|++|+|+|+++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 347899999999999999999999999999998753
No 363
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.59 E-value=0.088 Score=48.51 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999998775
No 364
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.55 E-value=0.06 Score=49.68 Aligned_cols=32 Identities=38% Similarity=0.520 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|.|||+|..|.+.|..|+ .|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999864
No 365
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.54 E-value=0.064 Score=51.60 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|+|||.|-.|...|..|.+.|++|+++|.+..
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345799999999999999999999999999998754
No 366
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.53 E-value=0.069 Score=49.98 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..++|.|||+|..|...|..|++.|++|++++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 44789999999999999999999999999998763
No 367
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.50 E-value=0.074 Score=50.99 Aligned_cols=34 Identities=32% Similarity=0.496 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 368
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.43 E-value=0.059 Score=49.17 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
.+|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998753
No 369
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.36 E-value=0.054 Score=52.75 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=30.1
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|.|||+|..|+..|..|++.|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999764
No 370
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.34 E-value=0.11 Score=47.97 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
...+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45789999999999999999999987 899999754
No 371
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.34 E-value=0.088 Score=52.30 Aligned_cols=53 Identities=25% Similarity=0.357 Sum_probs=41.4
Q ss_pred CeEEEECCChHHHHHHHHHHHc--------------CCceEEEeccccCCCCCh-----hHHHHHHHcCCCC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLVGAYP-----NIQNLFGELGIND 110 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--------------g~~V~vlE~~~~~~g~~~-----~~~~l~~~lg~~~ 110 (508)
..++|||||++|+..|..|++. ..+|+|+|+.+++....+ .+.+.+++.|++.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v 289 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKV 289 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceee
Confidence 4799999999999999988753 368999999998866543 3456677778754
No 372
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.32 E-value=0.062 Score=49.46 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998764
No 373
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.32 E-value=0.032 Score=44.95 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999998764
No 374
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.27 E-value=0.064 Score=50.19 Aligned_cols=30 Identities=30% Similarity=0.366 Sum_probs=29.0
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEec
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~ 88 (508)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 375
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.21 E-value=0.1 Score=48.29 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
+..+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 35789999999999999999999988 999999865
No 376
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.18 E-value=0.77 Score=43.59 Aligned_cols=51 Identities=20% Similarity=0.171 Sum_probs=39.8
Q ss_pred ccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhc
Q 010539 250 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 313 (508)
Q Consensus 250 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll 313 (508)
..+.+.|.+.+++.|++|+++++|++|+. . .++.||.||.|.|.+..++.+
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~R~~l 148 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHKTAHF 148 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGGTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCchHHhh
Confidence 46778888888888999999999998863 1 025799999999997654344
No 377
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.17 E-value=0.11 Score=48.09 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999765
No 378
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.14 E-value=0.087 Score=48.60 Aligned_cols=34 Identities=32% Similarity=0.486 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~~ 91 (508)
++|+|||+|..|.+.|..|++. |++|+++|.+..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 3799999999999999999985 789999998753
No 379
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.14 E-value=0.081 Score=48.50 Aligned_cols=36 Identities=19% Similarity=0.365 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~~ 91 (508)
+..+|.|||||..|...|+.|+..|+ +|+|+|....
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 34789999999999999999999998 9999998764
No 380
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.14 E-value=0.061 Score=49.35 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 381
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.13 E-value=0.086 Score=49.85 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..|+|+|+|.+|+.+|..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 789999999999999999999999999999864
No 382
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.09 E-value=0.081 Score=54.93 Aligned_cols=36 Identities=33% Similarity=0.333 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 346799999999999999999999999999998753
No 383
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.08 E-value=0.049 Score=47.47 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEE-Eeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~v-lE~~~ 90 (508)
++.+|.|||+|..|.+.|..|++.|++|++ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 457899999999999999999999999998 77654
No 384
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.06 E-value=0.058 Score=49.99 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-----C-CceEEEec
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEA 88 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~-----g-~~V~vlE~ 88 (508)
+++|.|||+|..|...|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999999 9 99999986
No 385
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.05 E-value=0.1 Score=47.15 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|+|+|+|-+|.++|+.|++.|.+|+|+.++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34689999999999999999999999999998763
No 386
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.03 E-value=0.099 Score=48.17 Aligned_cols=33 Identities=36% Similarity=0.536 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
.+|+|||+|..|...|+.|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999764
No 387
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.02 E-value=0.084 Score=46.92 Aligned_cols=35 Identities=37% Similarity=0.526 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
...+|+|||+|-.|..+|..|++.|. +|+|+|...
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 34689999999999999999999997 899999764
No 388
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.02 E-value=0.099 Score=49.90 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999775
No 389
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.98 E-value=0.079 Score=52.24 Aligned_cols=35 Identities=29% Similarity=0.321 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~ 90 (508)
+..+|.|||.|..|+..|..|++. |++|++++++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 346899999999999999999998 79999999764
No 390
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.96 E-value=0.096 Score=48.47 Aligned_cols=35 Identities=31% Similarity=0.354 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
+..+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34789999999999999999999987 899999764
No 391
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.94 E-value=0.098 Score=51.78 Aligned_cols=53 Identities=26% Similarity=0.475 Sum_probs=41.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----hhHHHHHHHcCCC
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----PNIQNLFGELGIN 109 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----~~~~~l~~~lg~~ 109 (508)
..+++|||+|.+|+..|..|++.|.+|+++|+.+...... ..+.+.+++.|++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGIS 248 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCE
Confidence 4689999999999999999999999999999988764332 2233445555654
No 392
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.87 E-value=0.035 Score=48.42 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
...+|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4568999999999999999999999999999873
No 393
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.84 E-value=0.09 Score=45.42 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=29.7
Q ss_pred eEEEEC-CChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIG-aG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|.||| +|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999998764
No 394
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.84 E-value=0.12 Score=46.98 Aligned_cols=35 Identities=34% Similarity=0.416 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+++|+|+|+|..|...+..|.++|++|+++.++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 46799999999999999999999999999988753
No 395
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.77 E-value=0.09 Score=48.72 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
++|.|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 369999999999999999999999 999999864
No 396
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.77 E-value=0.09 Score=48.60 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~ 89 (508)
...+|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999986
No 397
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.77 E-value=0.11 Score=48.05 Aligned_cols=35 Identities=29% Similarity=0.405 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
...+|+|||+|..|.+.|+.|++.|+ +|+++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 34689999999999999999999987 899999753
No 398
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.75 E-value=0.1 Score=49.46 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999764
No 399
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.74 E-value=0.12 Score=46.17 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+++|||+|-+|-++|+.|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999999999998764
No 400
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.67 E-value=0.089 Score=47.93 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
++|+|||+|..|.+.|+.|++.|+ +|+++|..+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 379999999999999999999988 899999865
No 401
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.64 E-value=0.1 Score=48.22 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcC--CceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g--~~V~vlE~~~ 90 (508)
.+|+|||+|..|.+.|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7999999864
No 402
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.62 E-value=0.11 Score=48.21 Aligned_cols=35 Identities=20% Similarity=0.090 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC-CceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g-~~V~vlE~~~~ 91 (508)
..+|.|||.|..|...|..|++.| ++|++++++..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 368999999999999999999999 99999998863
No 403
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.62 E-value=0.07 Score=51.30 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=29.1
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 404
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.62 E-value=0.14 Score=47.41 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=31.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
....+|.|||+|..|.+.|+.|+.+|+ +++|+|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 355799999999999999999999987 899999753
No 405
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.61 E-value=0.13 Score=47.55 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
...+|.|||.|..|.+.|..|++.|+ +|+++++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 999999875
No 406
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.47 E-value=0.11 Score=47.28 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998865
No 407
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.42 E-value=0.15 Score=46.49 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=31.2
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 368999999 9999999999999999999998764
No 408
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.39 E-value=0.067 Score=50.80 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998764
No 409
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.37 E-value=0.16 Score=46.46 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIG-aG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 99999999999999999999998765
No 410
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=92.33 E-value=0.13 Score=53.20 Aligned_cols=38 Identities=21% Similarity=0.178 Sum_probs=34.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
.+-.+|.|||||..|...|+.+++.|++|+|+|..+..
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~ 351 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQ 351 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhh
Confidence 35579999999999999999999999999999987644
No 411
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.29 E-value=0.13 Score=50.42 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
.+.+|.|||.|..|...|..|++.|++|++++++..
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 446899999999999999999999999999998753
No 412
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.22 E-value=0.11 Score=46.94 Aligned_cols=35 Identities=26% Similarity=0.141 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|+|||+|-+|.++|+.|++.|.+|+|+.+..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 44689999999999999999999999999998764
No 413
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=92.19 E-value=0.11 Score=53.93 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 456799999999999999999999999999998753
No 414
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.17 E-value=0.14 Score=48.75 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34789999999999999999999999999999764
No 415
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.16 E-value=0.14 Score=47.64 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||.|..|-+.|..|.+.|++|++++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999775
No 416
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.14 E-value=0.13 Score=47.34 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
++|+|||+|..|.+.|+.|++.|+ +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999987 899999865
No 417
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.06 E-value=0.16 Score=43.88 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=29.7
Q ss_pred eEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|+|+|| |..|...+..|+++|++|+++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999874
No 418
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.04 E-value=0.13 Score=46.55 Aligned_cols=32 Identities=31% Similarity=0.408 Sum_probs=29.8
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998764
No 419
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.03 E-value=0.14 Score=46.75 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
....|+|||+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 44689999999999999999999998 899998763
No 420
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.02 E-value=0.12 Score=46.36 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.7
Q ss_pred eEEEECCChHHHHHHHHHHHcC-CceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g-~~V~vlE~~~ 90 (508)
+|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999998764
No 421
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.99 E-value=0.14 Score=47.30 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
...+|+|||+|..|.+.|+.|+..|+ +++++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 45689999999999999999999987 899999753
No 422
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.78 E-value=0.12 Score=50.84 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 55789999999999999999999999999998764
No 423
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.76 E-value=0.16 Score=46.11 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
.+|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899998764
No 424
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.75 E-value=0.12 Score=50.81 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~ 90 (508)
.++|.|||.|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999999 89999999864
No 425
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.70 E-value=0.15 Score=49.90 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
+...|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4578999999999999999999999999999964
No 426
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.69 E-value=0.19 Score=46.79 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=30.7
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGa-G~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
...+|+|||+ |..|.++|+.|+..|. +|+++|...
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 4578999998 9999999999999985 899999753
No 427
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.65 E-value=0.16 Score=45.52 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC----CceEEEecccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g----~~V~vlE~~~~ 91 (508)
..+|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998753
No 428
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.59 E-value=0.2 Score=46.31 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
+..+|+|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998875 899999864
No 429
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.58 E-value=0.23 Score=42.27 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.8
Q ss_pred CeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999999 9999999999999999999999875
No 430
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.55 E-value=0.19 Score=43.57 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=29.8
Q ss_pred eEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|+|+|| |..|...+..|+++|++|+++.++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999998 9999999999999999999998764
No 431
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.52 E-value=0.18 Score=47.56 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.3
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCC---ceEEEeccc
Q 010539 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGa-G~aGlsaA~~L~~~g~---~V~vlE~~~ 90 (508)
...+|+|||| |.+|+.|+..+...|. +|+++|.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 3579999999 9999999999999998 999999876
No 432
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.50 E-value=0.18 Score=46.86 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC----CceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g----~~V~vlE~~~ 90 (508)
+.++|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 4468999999999999999999999 8999998764
No 433
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.49 E-value=0.17 Score=45.61 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
....++|||+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.43 E-value=0.13 Score=48.97 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcC-------CceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g-------~~V~vlE~~~~ 91 (508)
.+|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998764
No 435
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.42 E-value=0.086 Score=46.39 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
...+|+|||+|-.|...|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 44689999999999999999999999 999998753
No 436
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.42 E-value=0.15 Score=46.74 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999998764
No 437
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.41 E-value=0.18 Score=46.54 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
...+|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34699999999999999999999885 899999653
No 438
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.40 E-value=0.17 Score=46.33 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.8
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998764
No 439
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.36 E-value=0.22 Score=45.05 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC---ceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~---~V~vlE~~~ 90 (508)
..+|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4679999999999999999999998 999999875
No 440
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.34 E-value=0.19 Score=49.54 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 441
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.29 E-value=0.11 Score=49.02 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcC-------CceEEEecccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g-------~~V~vlE~~~~ 91 (508)
.+|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 89999998765
No 442
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.29 E-value=0.26 Score=51.17 Aligned_cols=54 Identities=22% Similarity=0.159 Sum_probs=42.1
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHcCCceEEEeccccCCCC------ChhHHHHHHHcCCC
Q 010539 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVLVGA------YPNIQNLFGELGIN 109 (508)
Q Consensus 56 ~~~dVvIIG--aG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~------~~~~~~l~~~lg~~ 109 (508)
...+|+||| +|.+|+.+|..|++.|.+|+++++.+..... ...+.+.+++.|++
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~ 583 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVA 583 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCE
Confidence 446799999 9999999999999999999999998876432 22345556666653
No 443
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.28 E-value=0.19 Score=47.03 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEecccc
Q 010539 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 55 ~~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
.+.+.|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 35578999999 99999999999999999999988753
No 444
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.24 E-value=0.18 Score=45.62 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
...+|+|||+|-+|.+.|..|.+.|.+|++++++.
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34689999999999999999999999999998764
No 445
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.21 E-value=0.15 Score=46.66 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998764
No 446
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.16 E-value=0.23 Score=45.57 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45789999999999999999999999999999764
No 447
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.16 E-value=0.23 Score=46.15 Aligned_cols=36 Identities=19% Similarity=0.405 Sum_probs=31.9
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 55 ~~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+.+.|+|.|| |..|...|..|+++|++|+++.+..
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34568999998 9999999999999999999998854
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.09 E-value=0.16 Score=46.24 Aligned_cols=32 Identities=28% Similarity=0.261 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+|.|||+|..|...|..|++ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 469999999999999999999 99999998764
No 449
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.09 E-value=0.22 Score=44.16 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC----ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~----~V~vlE~~~ 90 (508)
.+|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 450
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.05 E-value=0.2 Score=48.63 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+.|+|+|+|..|..+|..|+..|.+|++.|.++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999998764
No 451
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.01 E-value=0.24 Score=45.16 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45789999999999999999999999999999764
No 452
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=91.00 E-value=0.19 Score=46.04 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.8
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG-~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
...+|+|||+| +.|..+|..|.+.|.+|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56899999999 67999999999999999999765
No 453
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.95 E-value=0.26 Score=43.80 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=30.0
Q ss_pred eEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
+++|||+|-+|-++++.|.+.|. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899998864
No 454
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.94 E-value=0.25 Score=45.35 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~ 89 (508)
+...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 55789999999999999999999998 89999876
No 455
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.93 E-value=0.2 Score=49.32 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998764
No 456
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.92 E-value=0.23 Score=45.97 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHcCC--ceEEEecc
Q 010539 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (508)
Q Consensus 55 ~~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~ 89 (508)
.++.+|+|||+|..|.+.|+.|+..++ +++++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 355799999999999999999998876 89999974
No 457
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.78 E-value=0.27 Score=44.22 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
....++|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 56789999999999999999999996 899998764
No 458
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.74 E-value=0.27 Score=44.50 Aligned_cols=35 Identities=31% Similarity=0.241 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
....++|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 45789999999999999999999998 699998764
No 459
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.69 E-value=0.22 Score=46.03 Aligned_cols=35 Identities=29% Similarity=0.381 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
+..+|+|||+|..|.+.|+.|+..+. +++++|...
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34789999999999999999999876 899999743
No 460
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.68 E-value=0.18 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+|.|||+|..|...|..|.+.|++|.+++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 3689999999999999999999999999998764
No 461
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.63 E-value=0.17 Score=50.10 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=38.0
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHcCCceEEEeccccCCCCChhHHHHHHHcCCCC
Q 010539 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGIND 110 (508)
Q Consensus 56 ~~~dVvIIGaG~aGls-aA~~L~~~g~~V~vlE~~~~~~g~~~~~~~l~~~lg~~~ 110 (508)
..++|.|||.|-+|++ +|..|.++|++|++.|.+.. ...+.+++.|+..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~------~~~~~l~~~gi~~ 70 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN------SVTQHLTALGAQI 70 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC------HHHHHHHHTTCEE
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC------HHHHHHHHCCCEE
Confidence 4578999999999998 69999999999999997642 2344566667643
No 462
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.62 E-value=0.17 Score=48.66 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=31.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
-+.-|||.|..|+..|..|++.|++|+++|.+...
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~k 46 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQT 46 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 46899999999999999999999999999987643
No 463
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=90.59 E-value=0.25 Score=44.60 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
...+++|||+|-+|-++|+.|.+.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 56789999999999999999999998 899998764
No 464
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.56 E-value=0.39 Score=44.73 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=32.0
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 55 ~~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+.+.|+|.|| |..|...+..|.++|++|+++.++.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 35578999998 9999999999999999999998754
No 465
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.51 E-value=0.19 Score=45.95 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=28.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccccC
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~ 92 (508)
.+|.+||-|..|...|.+|.+.|++|++++++...
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 47999999999999999999999999999987543
No 466
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.48 E-value=0.2 Score=49.25 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 379999999999999999999999999998764
No 467
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=90.47 E-value=0.23 Score=45.12 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--ceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~--~V~vlE~~~ 90 (508)
++|.|||+|-.|.++|+.|..++. +++|+|-.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 479999999999999999998875 799999754
No 468
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.46 E-value=0.19 Score=45.69 Aligned_cols=34 Identities=29% Similarity=0.254 Sum_probs=30.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....++|+|+|-+|.++|+.|++.| +|+|+.++.
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 3468999999999999999999999 999998763
No 469
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.43 E-value=0.27 Score=44.86 Aligned_cols=34 Identities=24% Similarity=0.530 Sum_probs=30.7
Q ss_pred CeEEEECC-ChHHHHHHHHHHHcCCceEEEecccc
Q 010539 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 58 ~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
++|+|.|| |..|...+.+|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999998 99999999999999999999987643
No 470
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.43 E-value=0.13 Score=49.52 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.1
Q ss_pred CeEEEECCChHHHHHHHHHHH-cCCceEEEe
Q 010539 58 LKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~-~g~~V~vlE 87 (508)
++|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 499999998
No 471
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.42 E-value=0.21 Score=45.19 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 55799999999999999999999997 799998664
No 472
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=90.40 E-value=0.28 Score=47.10 Aligned_cols=35 Identities=29% Similarity=0.490 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC---ceEEEe----ccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE----ARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~---~V~vlE----~~~ 90 (508)
+..+|+|+|||-+|.++|+.|.+.|. +|+|++ +..
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G 226 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPR 226 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcC
Confidence 45689999999999999999999998 899999 763
No 473
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.39 E-value=0.22 Score=43.32 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.6
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEecccc
Q 010539 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 57 ~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
+++|+|+|| |..|...+..|.++|++|+++.++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 468999996 99999999999999999999998753
No 474
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=90.39 E-value=0.28 Score=44.29 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
....++|||+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 55789999999999999999999996 899998764
No 475
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.34 E-value=0.2 Score=45.00 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCc-eEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~-V~vlE~~~ 90 (508)
.+|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 88998764
No 476
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.27 E-value=0.3 Score=45.16 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
...+|+|||+|-.|..+|..|+..|. +++|+|...
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 46789999999999999999999997 789998764
No 477
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.27 E-value=0.25 Score=45.42 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=29.0
Q ss_pred eEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
+|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999764
No 478
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.16 E-value=0.17 Score=46.30 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
.+|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 54
No 479
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.13 E-value=0.31 Score=45.54 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
..+|.|||+|..|.+.|..|++.|++|++.+++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999998764
No 480
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.08 E-value=0.26 Score=48.45 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3689999999999999999999999999998764
No 481
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.07 E-value=0.24 Score=44.38 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=27.9
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEec
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~ 88 (508)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999765
No 482
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.97 E-value=0.28 Score=43.53 Aligned_cols=35 Identities=37% Similarity=0.463 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~~ 90 (508)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 45789999999999999999999997 789998764
No 483
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.95 E-value=0.33 Score=45.58 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~ 89 (508)
+.+.|+|+|+|-.|..+|.+|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5578999999999999999999999999999864
No 484
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.90 E-value=0.36 Score=44.27 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEecc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~ 89 (508)
....++|+|+|-+|-++|+.|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 55789999999999999999999998 79999876
No 485
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=89.88 E-value=0.26 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+++|.+||-|..|...|.+|.+.|++|+++++..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999999764
No 486
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.87 E-value=0.33 Score=45.49 Aligned_cols=35 Identities=31% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3468999999 9999999999999999999999875
No 487
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=89.83 E-value=0.25 Score=45.50 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.7
Q ss_pred CeEEEECC-ChHHHHHHHHHHHcC--CceEEEeccc
Q 010539 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGa-G~aGlsaA~~L~~~g--~~V~vlE~~~ 90 (508)
++|+|||| |..|.+.|+.|++.| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999988 6899999865
No 488
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.82 E-value=0.35 Score=44.55 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=32.3
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+.|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4578999999 99999999999999999999998764
No 489
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.75 E-value=0.32 Score=43.53 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=30.0
Q ss_pred eEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+|+|||+|-+|.+.|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998764
No 490
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.73 E-value=0.33 Score=43.45 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=29.8
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+.|+|.|| |-.|...|..|+++|++|+++.++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 4467888885 7889999999999999999998764
No 491
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.70 E-value=0.37 Score=43.78 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=31.3
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIG-aG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.+.++|+| +|-+|.++|..|++.|.+|+++.++.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 446899999 99999999999999999999998763
No 492
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.35 E-value=0.51 Score=40.80 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=29.5
Q ss_pred CeEEEECC-ChHHHHHHHHHH-HcCCceEEEeccc
Q 010539 58 LKVVIAGA-GLAGLSTAKYLA-DAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGa-G~aGlsaA~~L~-~~g~~V~vlE~~~ 90 (508)
+.|+|+|| |..|...|..|+ +.|++|+++.++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 45999995 999999999999 8999999998874
No 493
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=89.24 E-value=0.34 Score=46.22 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|+|||.|..|..+|..|...|.+|++.|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999764
No 494
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.24 E-value=0.24 Score=43.55 Aligned_cols=35 Identities=26% Similarity=0.268 Sum_probs=31.1
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHcC-CceEEEeccc
Q 010539 56 KPLKVVIAG-AGLAGLSTAKYLADAG-HKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIG-aG~aGlsaA~~L~~~g-~~V~vlE~~~ 90 (508)
.++.|+|.| +|..|...|..|+++| ++|+++.++.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 456799999 5999999999999999 8999998875
No 495
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.22 E-value=0.3 Score=44.42 Aligned_cols=34 Identities=29% Similarity=0.244 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCceEEEeccc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~--g~~V~vlE~~~ 90 (508)
..+|.|||+|..|.+.|..|++. |++|++++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 46899999999999999999988 67999998764
No 496
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.15 E-value=0.51 Score=45.01 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEecccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~ 91 (508)
..+.|+|||+|..|...|..+.+.|++|++++....
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 456899999999999999999999999999987643
No 497
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=89.12 E-value=0.38 Score=43.21 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-ceEEEecc
Q 010539 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (508)
Q Consensus 57 ~~dVvIIGaG~aGlsaA~~L~~~g~-~V~vlE~~ 89 (508)
..+|+|||+|-+|-++|+.|++.|. +|+|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 79999876
No 498
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=89.07 E-value=0.42 Score=42.28 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=29.9
Q ss_pred CeEEEECC-ChHHHHHHHHHHHcCCceEEEeccc
Q 010539 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 58 ~dVvIIGa-G~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
+.|+|.|| |..|...|..|+++|++|+++.++.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 46899988 9999999999999999999998865
No 499
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=89.07 E-value=0.26 Score=47.86 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=39.1
Q ss_pred cchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCC--cEEEccEEEEccChH
Q 010539 251 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVD 307 (508)
Q Consensus 251 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g--~~i~ad~VI~A~~~~ 307 (508)
...+.+.+.++++|+++++++.|++|+ .++.+ +...+| +++.+|.||+|+|..
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~--~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIE--PDKVI--YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEEC--SSEEE--EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEe--CCceE--EEeeCCCceEeecceEEEeccCC
Confidence 444567777888999999999999996 33322 444343 579999999999754
No 500
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.04 E-value=0.34 Score=47.50 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEeccc
Q 010539 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (508)
Q Consensus 56 ~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~ 90 (508)
....|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999764
Done!