Query 010540
Match_columns 508
No_of_seqs 421 out of 3066
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 09:00:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 9.9E-28 3.4E-32 221.8 12.1 167 184-437 4-171 (172)
2 3oi8_A Uncharacterized protein 99.9 3.3E-25 1.1E-29 201.4 14.0 138 186-329 2-140 (156)
3 3ocm_A Putative membrane prote 99.9 2.1E-25 7.1E-30 206.9 12.8 152 204-439 14-166 (173)
4 3lv9_A Putative transporter; C 99.9 2.5E-24 8.4E-29 193.3 10.7 123 205-329 2-125 (148)
5 3oco_A Hemolysin-like protein 99.9 1.9E-24 6.7E-29 195.4 6.6 148 208-438 2-151 (153)
6 3lfr_A Putative metal ION tran 99.9 3E-22 1E-26 177.5 10.8 132 224-438 1-135 (136)
7 3jtf_A Magnesium and cobalt ef 99.9 1.6E-21 5.4E-26 171.1 12.4 105 223-329 2-106 (129)
8 3hf7_A Uncharacterized CBS-dom 99.8 1.9E-21 6.5E-26 171.1 9.7 103 225-329 1-107 (130)
9 3k6e_A CBS domain protein; str 99.8 2.1E-21 7.2E-26 176.8 9.4 103 223-329 12-122 (156)
10 2qrd_G Protein C1556.08C; AMPK 99.8 2.9E-21 9.9E-26 196.1 8.6 241 208-461 3-283 (334)
11 3i8n_A Uncharacterized protein 99.8 8E-21 2.7E-25 166.7 8.6 106 222-329 2-109 (130)
12 3kxr_A Magnesium transporter, 99.8 1E-19 3.5E-24 173.2 16.0 127 187-329 25-154 (205)
13 2v8q_E 5'-AMP-activated protei 99.8 3.3E-21 1.1E-25 195.5 5.4 241 205-461 16-291 (330)
14 3nqr_A Magnesium and cobalt ef 99.8 4.3E-20 1.5E-24 161.3 11.4 104 224-329 1-106 (127)
15 3t4n_C Nuclear protein SNF4; C 99.8 1.9E-21 6.6E-26 196.5 3.0 243 206-461 9-288 (323)
16 3ddj_A CBS domain-containing p 99.8 3.5E-20 1.2E-24 184.9 4.9 222 185-433 63-288 (296)
17 4esy_A CBS domain containing m 99.8 5.6E-19 1.9E-23 162.3 11.9 112 212-329 6-143 (170)
18 2yvy_A MGTE, Mg2+ transporter 99.8 9.4E-19 3.2E-23 174.1 13.5 117 207-329 116-237 (278)
19 3kh5_A Protein MJ1225; AMPK, A 99.8 9.7E-20 3.3E-24 179.4 3.2 220 185-427 50-279 (280)
20 2zy9_A Mg2+ transporter MGTE; 99.8 3.7E-18 1.3E-22 182.1 15.3 134 186-329 110-257 (473)
21 3kh5_A Protein MJ1225; AMPK, A 99.8 1.5E-18 5.1E-23 170.8 11.1 181 227-428 4-204 (280)
22 3ddj_A CBS domain-containing p 99.7 5.9E-18 2E-22 168.7 10.3 215 222-461 16-253 (296)
23 2emq_A Hypothetical conserved 99.7 6.3E-17 2.1E-21 145.8 12.0 108 218-329 3-119 (157)
24 2oux_A Magnesium transporter; 99.7 1.1E-16 3.9E-21 159.8 14.8 116 208-329 119-239 (286)
25 2yzq_A Putative uncharacterize 99.7 6.2E-17 2.1E-21 159.7 12.5 191 224-429 58-279 (282)
26 4gqw_A CBS domain-containing p 99.7 7.4E-17 2.5E-21 143.9 11.6 104 224-329 3-123 (152)
27 3ctu_A CBS domain protein; str 99.7 2.3E-17 8E-22 148.8 8.2 108 218-329 7-122 (156)
28 2yzq_A Putative uncharacterize 99.7 9.8E-18 3.3E-22 165.5 6.2 177 226-425 1-180 (282)
29 2yzi_A Hypothetical protein PH 99.7 1.8E-16 6.3E-21 139.6 13.5 104 221-329 2-109 (138)
30 3t4n_C Nuclear protein SNF4; C 99.7 1.7E-17 5.7E-22 167.5 7.5 187 228-429 116-320 (323)
31 3kpb_A Uncharacterized protein 99.7 5E-17 1.7E-21 140.0 9.4 100 226-329 1-100 (122)
32 3lqn_A CBS domain protein; csg 99.7 4.2E-17 1.5E-21 145.9 9.1 104 222-329 11-123 (150)
33 3fhm_A Uncharacterized protein 99.7 7.6E-17 2.6E-21 147.2 9.2 110 218-329 16-131 (165)
34 3gby_A Uncharacterized protein 99.7 2E-16 6.8E-21 137.9 11.3 101 224-329 3-106 (128)
35 2ef7_A Hypothetical protein ST 99.7 3E-16 1E-20 137.3 11.5 102 223-329 1-105 (133)
36 3sl7_A CBS domain-containing p 99.7 2.2E-16 7.4E-21 145.3 10.2 103 225-329 3-136 (180)
37 2rih_A Conserved protein with 99.7 3.2E-16 1.1E-20 138.8 10.8 99 226-329 5-108 (141)
38 3k2v_A Putative D-arabinose 5- 99.6 2E-16 6.9E-21 141.7 8.7 102 226-329 28-133 (149)
39 2p9m_A Hypothetical protein MJ 99.6 5.6E-16 1.9E-20 136.3 11.2 103 223-329 5-116 (138)
40 1yav_A Hypothetical protein BS 99.6 2.3E-16 8E-21 142.8 8.9 104 222-329 10-122 (159)
41 2v8q_E 5'-AMP-activated protei 99.6 2.1E-16 7.1E-21 160.1 8.8 188 227-429 119-323 (330)
42 2rc3_A CBS domain; in SITU pro 99.6 7.3E-16 2.5E-20 135.3 10.5 100 227-329 7-112 (135)
43 4fry_A Putative signal-transdu 99.6 8.2E-16 2.8E-20 138.7 11.2 101 226-329 7-116 (157)
44 2qrd_G Protein C1556.08C; AMPK 99.6 1.6E-16 5.4E-21 161.1 7.0 188 229-429 110-315 (334)
45 1o50_A CBS domain-containing p 99.6 1E-15 3.4E-20 138.4 11.3 102 222-329 12-133 (157)
46 3fv6_A YQZB protein; CBS domai 99.6 1.7E-15 5.7E-20 137.3 11.8 102 223-329 14-121 (159)
47 1y5h_A Hypothetical protein RV 99.6 7.4E-16 2.5E-20 134.8 8.3 103 223-329 5-112 (133)
48 1pbj_A Hypothetical protein; s 99.6 1.3E-15 4.4E-20 131.5 9.7 99 226-329 1-103 (125)
49 1pvm_A Conserved hypothetical 99.6 1.5E-15 5.3E-20 141.0 10.7 100 226-329 9-113 (184)
50 2o16_A Acetoin utilization pro 99.6 2.5E-15 8.7E-20 136.4 11.1 102 224-329 3-116 (160)
51 2nyc_A Nuclear protein SNF4; b 99.6 2.4E-15 8.1E-20 133.0 9.5 103 223-329 5-121 (144)
52 2j9l_A Chloride channel protei 99.6 4E-15 1.4E-19 137.5 10.2 106 223-329 8-146 (185)
53 2pfi_A Chloride channel protei 99.6 3.1E-15 1.1E-19 135.3 9.2 109 218-329 5-128 (164)
54 2uv4_A 5'-AMP-activated protei 99.6 7.5E-15 2.6E-19 131.9 10.2 101 223-329 20-131 (152)
55 3org_A CMCLC; transporter, tra 99.6 1.9E-15 6.4E-20 166.8 6.5 104 224-329 451-606 (632)
56 1zfj_A Inosine monophosphate d 99.5 1.9E-14 6.5E-19 154.3 13.2 149 186-349 54-209 (491)
57 1vr9_A CBS domain protein/ACT 99.5 3.7E-14 1.3E-18 135.3 13.4 108 225-338 12-119 (213)
58 3usb_A Inosine-5'-monophosphat 99.5 3.4E-14 1.2E-18 152.7 12.5 150 185-350 76-233 (511)
59 4fxs_A Inosine-5'-monophosphat 99.5 5.1E-15 1.7E-19 158.5 4.8 150 185-350 52-208 (496)
60 3l2b_A Probable manganase-depe 99.5 3.8E-14 1.3E-18 137.6 7.4 119 225-349 6-242 (245)
61 3pc3_A CG1753, isoform A; CBS, 99.5 1E-13 3.6E-18 149.8 10.7 102 223-329 381-487 (527)
62 2cu0_A Inosine-5'-monophosphat 99.5 7.8E-15 2.7E-19 157.1 1.5 145 186-349 57-206 (486)
63 1me8_A Inosine-5'-monophosphat 99.4 1.3E-14 4.6E-19 155.8 1.7 156 186-352 61-222 (503)
64 2d4z_A Chloride channel protei 99.4 2E-13 6.9E-18 133.5 9.9 60 222-284 9-69 (250)
65 4avf_A Inosine-5'-monophosphat 99.4 6.3E-14 2.2E-18 149.9 2.3 149 185-350 51-206 (490)
66 1vrd_A Inosine-5'-monophosphat 99.2 5.2E-12 1.8E-16 135.4 2.1 132 209-352 82-216 (494)
67 4af0_A Inosine-5'-monophosphat 99.1 2.1E-11 7.2E-16 128.6 1.6 127 212-350 129-257 (556)
68 1jcn_A Inosine monophosphate d 99.1 1.5E-11 5.2E-16 132.5 -0.0 121 226-351 108-233 (514)
69 3l2b_A Probable manganase-depe 98.8 1.2E-09 4.1E-14 105.7 2.9 59 290-350 6-64 (245)
70 4fxs_A Inosine-5'-monophosphat 98.6 1.1E-08 3.7E-13 109.4 3.7 115 292-427 90-207 (496)
71 3ghd_A A cystathionine beta-sy 98.6 6.3E-08 2.2E-12 75.5 6.9 65 237-304 1-70 (70)
72 3lhh_A CBS domain protein; str 98.4 7.4E-08 2.5E-12 88.0 3.4 123 250-391 10-135 (172)
73 4avf_A Inosine-5'-monophosphat 98.4 3E-08 1E-12 105.9 -0.0 114 292-427 89-205 (490)
74 3fio_A A cystathionine beta-sy 98.4 4.9E-07 1.7E-11 69.4 6.9 63 238-303 2-69 (70)
75 1vr9_A CBS domain protein/ACT 98.4 4.8E-08 1.6E-12 92.7 0.8 103 225-332 71-174 (213)
76 1vrd_A Inosine-5'-monophosphat 98.3 6.6E-08 2.3E-12 103.5 0.6 119 293-429 97-215 (494)
77 3oi8_A Uncharacterized protein 98.3 2.7E-08 9.2E-13 89.3 -3.0 117 290-425 37-156 (156)
78 4esy_A CBS domain containing m 98.3 3.5E-07 1.2E-11 83.1 4.0 128 290-429 17-162 (170)
79 3lfr_A Putative metal ION tran 98.3 4.1E-07 1.4E-11 79.5 4.2 93 291-391 3-98 (136)
80 3jtf_A Magnesium and cobalt ef 98.3 7.1E-07 2.4E-11 77.1 5.5 123 290-433 4-129 (129)
81 3nqr_A Magnesium and cobalt ef 98.2 5.3E-07 1.8E-11 77.6 4.1 121 291-429 3-126 (127)
82 3lv9_A Putative transporter; C 98.2 3.5E-07 1.2E-11 80.9 2.4 123 291-433 23-148 (148)
83 1jcn_A Inosine monophosphate d 98.1 3.3E-07 1.1E-11 98.5 -0.1 121 292-428 109-232 (514)
84 3gby_A Uncharacterized protein 98.1 2.5E-06 8.5E-11 73.4 4.6 121 290-428 4-125 (128)
85 3i8n_A Uncharacterized protein 98.0 8.5E-07 2.9E-11 76.7 0.9 121 291-429 6-129 (130)
86 3ghd_A A cystathionine beta-sy 98.0 1.8E-05 6E-10 61.4 7.3 29 301-329 2-30 (70)
87 3k6e_A CBS domain protein; str 98.0 1.3E-06 4.6E-11 78.5 1.0 132 292-437 16-152 (156)
88 3hf7_A Uncharacterized CBS-dom 98.0 1.3E-06 4.5E-11 75.6 0.8 124 292-432 3-129 (130)
89 3fv6_A YQZB protein; CBS domai 98.0 2E-05 6.9E-10 70.4 8.4 38 291-329 17-54 (159)
90 3k2v_A Putative D-arabinose 5- 97.9 2E-05 6.7E-10 69.6 8.2 39 291-329 28-68 (149)
91 2yzi_A Hypothetical protein PH 97.9 5.7E-06 1.9E-10 71.8 4.5 128 290-435 6-134 (138)
92 3ocm_A Putative membrane prote 97.9 3.1E-06 1.1E-10 77.4 2.8 91 290-391 35-128 (173)
93 4fry_A Putative signal-transdu 97.9 7.7E-06 2.6E-10 72.8 5.1 60 223-287 75-134 (157)
94 3lqn_A CBS domain protein; csg 97.9 3.3E-06 1.1E-10 74.5 2.4 127 291-432 15-145 (150)
95 3kpb_A Uncharacterized protein 97.9 1.6E-05 5.3E-10 67.3 6.3 59 224-286 60-118 (122)
96 3ctu_A CBS domain protein; str 97.9 2.7E-06 9.2E-11 75.7 1.0 128 291-434 15-146 (156)
97 3fio_A A cystathionine beta-sy 97.9 3.9E-05 1.3E-09 58.5 7.3 30 300-329 1-30 (70)
98 2rih_A Conserved protein with 97.9 6.6E-06 2.2E-10 71.8 3.2 121 291-429 5-128 (141)
99 2p9m_A Hypothetical protein MJ 97.8 6E-06 2E-10 71.6 2.7 127 290-429 7-136 (138)
100 2ef7_A Hypothetical protein ST 97.8 7.2E-06 2.5E-10 70.7 3.0 121 291-429 4-125 (133)
101 2emq_A Hypothetical conserved 97.8 1.2E-05 4.1E-10 71.4 3.9 129 290-433 10-142 (157)
102 1pbj_A Hypothetical protein; s 97.8 2.6E-05 9E-10 66.1 5.4 59 223-286 62-120 (125)
103 2rc3_A CBS domain; in SITU pro 97.8 3.5E-05 1.2E-09 66.5 6.3 59 223-286 71-129 (135)
104 1pvm_A Conserved hypothetical 97.7 5.6E-05 1.9E-09 69.2 7.9 60 223-286 72-131 (184)
105 2o16_A Acetoin utilization pro 97.7 3.3E-05 1.1E-09 69.1 6.1 39 291-329 5-43 (160)
106 4gqw_A CBS domain-containing p 97.7 2.1E-05 7.3E-10 68.9 4.6 60 223-286 82-141 (152)
107 4af0_A Inosine-5'-monophosphat 97.7 5.2E-06 1.8E-10 87.8 0.7 134 295-454 142-278 (556)
108 3oco_A Hemolysin-like protein 97.7 5.2E-05 1.8E-09 67.2 6.9 57 225-286 85-141 (153)
109 3kxr_A Magnesium transporter, 97.7 1.6E-05 5.6E-10 74.7 3.3 117 291-429 54-174 (205)
110 3fhm_A Uncharacterized protein 97.7 5.3E-05 1.8E-09 68.1 6.6 60 223-287 90-149 (165)
111 1y5h_A Hypothetical protein RV 97.7 3.8E-05 1.3E-09 66.0 5.0 59 223-286 71-129 (133)
112 1yav_A Hypothetical protein BS 97.7 1.1E-05 3.8E-10 72.0 1.5 130 291-435 14-147 (159)
113 3sl7_A CBS domain-containing p 97.6 4.2E-05 1.4E-09 69.2 5.2 61 222-286 94-154 (180)
114 2d4z_A Chloride channel protei 97.6 7.8E-05 2.7E-09 72.4 7.0 40 290-329 12-51 (250)
115 2pfi_A Chloride channel protei 97.6 7.2E-05 2.5E-09 66.5 6.2 40 290-329 12-51 (164)
116 2nyc_A Nuclear protein SNF4; b 97.6 0.00012 4.1E-09 63.5 6.7 39 291-329 8-49 (144)
117 2uv4_A 5'-AMP-activated protei 97.5 8.3E-05 2.8E-09 65.7 5.5 59 225-285 86-148 (152)
118 1me8_A Inosine-5'-monophosphat 97.5 3.2E-05 1.1E-09 82.8 3.2 109 224-336 159-269 (503)
119 1o50_A CBS domain-containing p 97.5 0.00013 4.5E-09 64.8 6.4 39 291-329 16-55 (157)
120 3usb_A Inosine-5'-monophosphat 97.5 0.00022 7.6E-09 76.3 8.7 112 223-338 172-285 (511)
121 3org_A CMCLC; transporter, tra 97.5 3.7E-05 1.3E-09 84.6 2.6 128 290-429 452-625 (632)
122 3pc3_A CG1753, isoform A; CBS, 97.4 5E-05 1.7E-09 81.7 2.4 125 291-429 384-511 (527)
123 2j9l_A Chloride channel protei 97.4 0.00018 6.1E-09 65.3 5.7 59 223-286 105-163 (185)
124 3ded_A Probable hemolysin; str 97.3 6.8E-05 2.3E-09 63.8 1.7 56 431-486 17-82 (113)
125 2yvy_A MGTE, Mg2+ transporter 97.3 0.00024 8.3E-09 69.7 5.5 61 223-287 196-256 (278)
126 2oux_A Magnesium transporter; 97.1 0.00031 1.1E-08 69.4 4.7 60 223-286 198-257 (286)
127 2zy9_A Mg2+ transporter MGTE; 97.1 0.00018 6.1E-09 76.3 3.1 120 290-432 154-279 (473)
128 2r2z_A Hemolysin; APC85144, en 96.8 0.00038 1.3E-08 56.9 1.4 40 445-486 17-58 (93)
129 2cu0_A Inosine-5'-monophosphat 96.5 0.0016 5.4E-08 69.3 4.7 105 224-338 148-257 (486)
130 2pli_A Uncharacterized protein 96.5 0.0008 2.7E-08 54.7 1.6 40 445-486 19-60 (91)
131 1zfj_A Inosine monophosphate d 96.1 0.0023 7.7E-08 68.1 3.2 115 293-428 92-210 (491)
132 3llb_A Uncharacterized protein 94.4 0.01 3.5E-07 47.2 0.9 40 445-486 10-51 (83)
133 2rk5_A Putative hemolysin; str 94.3 0.012 4.1E-07 47.2 1.2 40 445-486 9-50 (87)
134 3lae_A UPF0053 protein HI0107; 94.3 0.011 3.8E-07 46.7 1.0 40 445-486 10-51 (81)
135 2oai_A Hemolysin; PFAM03471, x 94.1 0.012 4.2E-07 47.9 0.9 40 445-486 19-63 (94)
136 2o3g_A Putative protein; APC85 94.1 0.014 4.7E-07 47.4 1.2 40 445-486 18-61 (92)
137 2p3h_A Uncharacterized CBS dom 94.1 0.014 4.7E-07 48.3 1.1 32 445-478 13-44 (101)
138 2p4p_A Hypothetical protein HD 94.1 0.019 6.5E-07 45.9 1.9 41 445-486 10-53 (86)
139 2p13_A CBS domain; alpha-beta 93.8 0.018 6.2E-07 46.5 1.4 33 445-479 16-50 (90)
140 2pls_A CBS domain protein; APC 93.1 0.023 7.9E-07 45.4 0.9 42 445-486 10-55 (86)
141 2nqw_A CBS domain protein; PFA 89.6 0.083 2.8E-06 42.7 0.7 40 445-486 16-62 (93)
142 3llb_A Uncharacterized protein 47.4 5.7 0.0002 30.9 1.0 38 366-403 4-42 (83)
143 3lae_A UPF0053 protein HI0107; 44.1 7.6 0.00026 30.0 1.2 38 366-403 4-42 (81)
144 2rk5_A Putative hemolysin; str 44.0 6 0.00021 31.0 0.6 38 367-404 4-42 (87)
145 2p13_A CBS domain; alpha-beta 38.7 9.8 0.00033 30.0 1.1 40 365-404 9-51 (90)
146 2r2z_A Hemolysin; APC85144, en 37.7 9.2 0.00032 30.3 0.8 40 365-404 10-50 (93)
147 2p4p_A Hypothetical protein HD 36.2 14 0.00049 28.7 1.7 37 368-404 6-45 (86)
148 2pls_A CBS domain protein; APC 36.0 11 0.00039 29.3 1.0 28 367-394 5-33 (86)
149 3arc_L Photosystem II reaction 35.5 41 0.0014 21.8 3.3 22 30-52 14-35 (37)
150 2pli_A Uncharacterized protein 34.8 11 0.00036 29.9 0.7 40 365-404 12-52 (91)
151 2oai_A Hemolysin; PFAM03471, x 33.9 11 0.00038 30.0 0.7 30 365-394 12-41 (94)
152 2p3h_A Uncharacterized CBS dom 30.9 14 0.00047 30.1 0.8 46 365-410 6-53 (101)
153 2o3g_A Putative protein; APC85 28.5 14 0.00048 29.2 0.4 40 365-404 11-53 (92)
154 3ded_A Probable hemolysin; str 26.1 21 0.00071 29.5 1.0 41 364-404 28-74 (113)
155 4h33_A LMO2059 protein; bilaye 20.2 2.3E+02 0.0079 23.7 6.6 16 128-143 54-69 (137)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=9.9e-28 Score=221.78 Aligned_cols=167 Identities=25% Similarity=0.466 Sum_probs=115.3
Q ss_pred cccccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEE
Q 010540 184 EALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRV 263 (508)
Q Consensus 184 ~~~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~ 263 (508)
.+.+|++||+.+++ ++.+.|.++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++
T Consensus 4 ~~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~ 78 (172)
T 3lhh_A 4 DDNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRF 78 (172)
T ss_dssp -------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEE
T ss_pred cccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEE
Confidence 46789999999998 44567999999999999999999999999999988999999999999 99999999999999
Q ss_pred EEeeCCCCcEEEEeEHhHHhccCCCC-cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCC
Q 010540 264 PVYSGNPKNIIGLLLVKSLLTVRPET-ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (508)
Q Consensus 264 PV~~~~~d~ivGiv~~kDll~~~~~~-~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~ 342 (508)
||++++.++++|+|+.+|++.+...+ ..+++++| +++.++++++++.++++.|.+++.+.+||+|
T Consensus 79 pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd------------- 144 (172)
T 3lhh_A 79 PVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD------------- 144 (172)
T ss_dssp EEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-------------
T ss_pred EEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-------------
Confidence 99987547899999999999765432 46899999 9999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCcccccccccccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHH
Q 010540 343 GKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLED 422 (508)
Q Consensus 343 kDll~~i~~~~~~~~l~~p~~~i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleD 422 (508)
++|+++||||.+|
T Consensus 145 -------------------------------------------------------------------~~g~lvGiit~~D 157 (172)
T 3lhh_A 145 -------------------------------------------------------------------EYGDLKGLVTLQD 157 (172)
T ss_dssp -------------------------------------------------------------------TTSCEEEEEEHHH
T ss_pred -------------------------------------------------------------------CCCCEEEEeeHHH
Confidence 6899999999999
Q ss_pred HHHHHhCCccCCCCc
Q 010540 423 VFEELLQEEIVDETD 437 (508)
Q Consensus 423 Ileeivg~eI~dE~d 437 (508)
|+++++| +|.||+|
T Consensus 158 il~~l~~-~~~de~~ 171 (172)
T 3lhh_A 158 MMDALTG-EFFQEDG 171 (172)
T ss_dssp HHHHHHT-TCC----
T ss_pred HHHHHhC-CCccccC
Confidence 9999999 9999976
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.92 E-value=3.3e-25 Score=201.36 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=126.1
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEE
Q 010540 186 LFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPV 265 (508)
Q Consensus 186 ~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV 265 (508)
.+|++||+.+++. +.++|.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 4789999999983 4567999999999999999999999999999988999999999999 9999999999999999
Q ss_pred eeCCCCcEEEEeEHhHHhccCCC-CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 266 YSGNPKNIIGLLLVKSLLTVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 266 ~~~~~d~ivGiv~~kDll~~~~~-~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++++.++++|+++.+|++.+... ...+++++| +++.++++++++.++++.|.+++.+.+||+|
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 140 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVID 140 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEEC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEEC
Confidence 98764699999999999987654 457899997 5688999999999999999999999999999
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.92 E-value=2.1e-25 Score=206.89 Aligned_cols=152 Identities=21% Similarity=0.318 Sum_probs=136.0
Q ss_pred ccCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHh
Q 010540 204 GKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (508)
Q Consensus 204 ~~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll 283 (508)
.++|.++++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++
T Consensus 14 ~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~ 92 (173)
T 3ocm_A 14 PAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLV 92 (173)
T ss_dssp ----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHH
T ss_pred HhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHH
Confidence 456999999999999999999999999999988999999999999 9999999999999999987557999999999999
Q ss_pred ccCCC-CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccc
Q 010540 284 TVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPL 362 (508)
Q Consensus 284 ~~~~~-~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~ 362 (508)
.+... ...+++ |++++++|++++++.++++.|.+++.+++||+|
T Consensus 93 ~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd--------------------------------- 137 (173)
T 3ocm_A 93 ADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD--------------------------------- 137 (173)
T ss_dssp HHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC---------------------------------
T ss_pred HHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe---------------------------------
Confidence 76422 235677 568899999999999999999999999999999
Q ss_pred cccccccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccCCCCccc
Q 010540 363 LSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDEY 439 (508)
Q Consensus 363 ~~i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~dE~d~~ 439 (508)
++|+++||||.+||+++++| +|.||+|.+
T Consensus 138 -----------------------------------------------e~g~lvGiIT~~Dil~~l~~-~i~de~~~~ 166 (173)
T 3ocm_A 138 -----------------------------------------------EFGAIEGLVTPIDVFEAIAG-EFPDEDELP 166 (173)
T ss_dssp -----------------------------------------------TTCCEEEEECHHHHHHHHHC-CCCCTTSCC
T ss_pred -----------------------------------------------CCCCEEEEEeHHHHHHHHhC-cCCCccccH
Confidence 68999999999999999999 999998853
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.91 E-value=2.5e-24 Score=193.31 Aligned_cols=123 Identities=18% Similarity=0.361 Sum_probs=99.1
Q ss_pred cCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhc
Q 010540 205 KGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT 284 (508)
Q Consensus 205 ~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~ 284 (508)
++|.++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999988999999999999 99999999999999999875479999999999987
Q ss_pred cCCCC-cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 285 VRPET-ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 285 ~~~~~-~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
..... ..+++++| +++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 125 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD 125 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe
Confidence 64333 57799998 9999999999999999999999999999999
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.90 E-value=1.9e-24 Score=195.38 Aligned_cols=148 Identities=28% Similarity=0.437 Sum_probs=123.9
Q ss_pred CCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEe-eCCCCcEEEEeEHhHHhccC
Q 010540 208 ELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVY-SGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 208 ~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~-~~~~d~ivGiv~~kDll~~~ 286 (508)
.++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|++...
T Consensus 2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~ 80 (153)
T 3oco_A 2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQA 80 (153)
T ss_dssp ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHH
T ss_pred CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHH
Confidence 36778999999999999999999999988999999999999 99999999999999999 55447999999999998754
Q ss_pred CC-CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccc
Q 010540 287 PE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSK 365 (508)
Q Consensus 287 ~~-~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i 365 (508)
.. ...+++++| +++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------------------------------------ 123 (153)
T 3oco_A 81 RIDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID------------------------------------ 123 (153)
T ss_dssp HHHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC------------------------------------
T ss_pred hcCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe------------------------------------
Confidence 32 256799998 9999999999999999999999999999999
Q ss_pred ccccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccCCCCcc
Q 010540 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDE 438 (508)
Q Consensus 366 ~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~dE~d~ 438 (508)
++|+++||||.+||+++++| +|.||+|.
T Consensus 124 --------------------------------------------~~g~~vGivt~~dil~~l~~-~~~de~~~ 151 (153)
T 3oco_A 124 --------------------------------------------EYGGTSGIITDKDVYEELFG-NLRDEQDD 151 (153)
T ss_dssp --------------------------------------------TTSCEEEEECHHHHHHHHHC---------
T ss_pred --------------------------------------------CCCCEEEEeeHHHHHHHHhc-cCCCcccC
Confidence 68999999999999999999 99999885
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.87 E-value=3e-22 Score=177.46 Aligned_cols=132 Identities=30% Similarity=0.494 Sum_probs=109.8
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC---CCccccccccccc
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---ETETPVSAVSIRR 300 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~---~~~~~V~dim~~~ 300 (508)
++.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++.+.. ....+++++| ++
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~ 78 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RP 78 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BC
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CC
Confidence 3678999999988999999999999 99999999999999999875479999999999997653 2346799997 55
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccccCCceeecCCCC
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRP 380 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~~~~~V~~~~~ 380 (508)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd--------------------------------------------------- 107 (136)
T 3lfr_A 79 ATFVPESKRLNVLLREFRANHNHMAIVID--------------------------------------------------- 107 (136)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCCEEEEEC---------------------------------------------------
T ss_pred CeEECCCCcHHHHHHHHHhcCCeEEEEEe---------------------------------------------------
Confidence 88999999999999999999999999999
Q ss_pred CccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccCCCCcc
Q 010540 381 LSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDE 438 (508)
Q Consensus 381 l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~dE~d~ 438 (508)
++|+++||||.+||+++++| +|.||+|.
T Consensus 108 -----------------------------~~g~lvGiit~~Dil~~l~~-~~~de~~~ 135 (136)
T 3lfr_A 108 -----------------------------EYGGVAGLVTIEDVLEQIVG-DIEDEHDV 135 (136)
T ss_dssp -----------------------------TTSCEEEEEEHHHHHTTC-----------
T ss_pred -----------------------------CCCCEEEEEEHHHHHHHHhC-CCcCcccC
Confidence 68999999999999999999 99999884
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.86 E-value=1.6e-21 Score=171.08 Aligned_cols=105 Identities=31% Similarity=0.490 Sum_probs=94.9
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccce
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP 302 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~ 302 (508)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++.+......+++++| +++.
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988999999999999 999999999999999998755799999999999987665667899987 5688
Q ss_pred eecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 303 RVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 303 ~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd 106 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVID 106 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEEC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.85 E-value=1.9e-21 Score=171.05 Aligned_cols=103 Identities=20% Similarity=0.357 Sum_probs=92.7
Q ss_pred ccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCC----ccccccccccc
Q 010540 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET----ETPVSAVSIRR 300 (508)
Q Consensus 225 ~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~----~~~V~dim~~~ 300 (508)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++++..++ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988999999999999 9999999999999999976558999999999999765543 24688887 88
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVD 107 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEc
Confidence 89999999999999999999999999999
No 9
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.84 E-value=2.1e-21 Score=176.81 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=90.6
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC--------Cccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------TETPVS 294 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~--------~~~~V~ 294 (508)
|-..+++++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.+... ...+++
T Consensus 12 ~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~ 89 (156)
T 3k6e_A 12 FLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMADTDIV 89 (156)
T ss_dssp HHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG
T ss_pred HhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccccccccCHH
Confidence 44568999999999999999999999 99999999999999999865 899999999999764321 246799
Q ss_pred ccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 295 AVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 295 dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++|.+++.++++++++.++++.|.+++ ++||+|
T Consensus 90 ~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd 122 (156)
T 3k6e_A 90 HMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp GTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC
T ss_pred HhhcCCceecccccHHHHHHHHHHHcC--CeEEEe
Confidence 999999999999999999999998765 589999
No 10
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.83 E-value=2.9e-21 Score=196.07 Aligned_cols=241 Identities=10% Similarity=0.095 Sum_probs=179.9
Q ss_pred CCChhHHHHHHHhhcC-cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 208 ELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 208 ~l~~~E~~~i~~vl~l-~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
-++++|+++++++++| .+.+|+|+|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 3567889999999995 4599999999999999999999999 9999999999999999998668999999999998642
Q ss_pred C--------CC------ccccc-------ccccccc--eeecCCCCHHHHHHHHHhCCCeEEEEEecCCC-----ccccC
Q 010540 287 P--------ET------ETPVS-------AVSIRRI--PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGK-----SKTLP 338 (508)
Q Consensus 287 ~--------~~------~~~V~-------dim~~~v--~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~-----i~Giv 338 (508)
. .. ..++. ++|.+++ .++++++++.++++.|.+++.+.+||+|++|+ ++|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Giv 161 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVL 161 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEe
Confidence 1 11 12222 3466777 89999999999999999999999999999876 99999
Q ss_pred CCCCCCccccccccCCC-CCCcccccccc-cccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEE
Q 010540 339 PMTDGKKPKLNEAKGGD-CDLTAPLLSKQ-DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIG 416 (508)
Q Consensus 339 ~~t~kDll~~i~~~~~~-~~l~~p~~~i~-~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvG 416 (508)
|.+|+++.+...... .....+..++. .+....+.++++.++.+..+.|..+..+...++ + ++|+++|
T Consensus 162 --t~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vv-----d----~~~~~~G 230 (334)
T 2qrd_G 162 --TQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIV-----N----SEGTLLN 230 (334)
T ss_dssp --EHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEE-----C----TTCBEEE
T ss_pred --eHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEE-----c----CCCcEEE
Confidence 999999776542211 01111211211 134567889999999999999887643322222 4 6799999
Q ss_pred eechHHHHHHHhCCccCCCCcccccc-c--------eeEEeccccChHHHhhcC
Q 010540 417 IITLEDVFEELLQEEIVDETDEYVDV-H--------KRIRVAAAAAASSVARAP 461 (508)
Q Consensus 417 IVTleDIleeivg~eI~dE~d~~~~~-~--------~~~~v~~~~~~~~~~~~~ 461 (508)
+||..|+++.+.+ +..+..+..... . .-+.+...+++.++.+.+
T Consensus 231 iit~~dl~~~~~~-~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m 283 (334)
T 2qrd_G 231 VYESVDVMHLIQD-GDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAI 283 (334)
T ss_dssp EEETHHHHHHHTT-SCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHH
T ss_pred EEEHHHHHHHhhc-cccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHH
Confidence 9999999998876 443222222111 1 236788888888876654
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.83 E-value=8e-21 Score=166.66 Aligned_cols=106 Identities=25% Similarity=0.350 Sum_probs=91.9
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC--Ccccccccccc
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIR 299 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~--~~~~V~dim~~ 299 (508)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++..... ...+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 477899999999988999999999999 999999999999999998755799999999999876432 246799998 6
Q ss_pred cceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 300 ~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 109 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVD 109 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEc
Confidence 788999999999999999999999999999
No 12
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.82 E-value=1e-19 Score=173.22 Aligned_cols=127 Identities=6% Similarity=0.065 Sum_probs=113.0
Q ss_pred ccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHc---CCcEE
Q 010540 187 FRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR---GHSRV 263 (508)
Q Consensus 187 ~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~---~~sr~ 263 (508)
+.+++.+.++. .++++|++++++++.+++.+|+++|++ +++++++++++. ++++.|.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 44555566654 378999999999999999999999998 899999999999 999999987 78899
Q ss_pred EEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 264 PVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 264 PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
||++++ ++++|+|+.+|++... ...+++++|.+++.+|++++++.++++.|.+++.+.+||+|
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHE--PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSC--TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred EEEcCC-CeEEEEEEHHHHHhCC--CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 999865 8999999999998653 35679999989999999999999999999999999999999
No 13
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.82 E-value=3.3e-21 Score=195.48 Aligned_cols=241 Identities=12% Similarity=0.191 Sum_probs=175.1
Q ss_pred cCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhc
Q 010540 205 KGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT 284 (508)
Q Consensus 205 ~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~ 284 (508)
..|.+.+.+++.+++. |.+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+++.+|++.
T Consensus 16 ~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~ 92 (330)
T 2v8q_E 16 HSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFIN 92 (330)
T ss_dssp -------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHH
T ss_pred HhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHH
Confidence 4566777777777776 57889999999999999999999999 99999999999999999987678999999999975
Q ss_pred cCCC------------Ccc-------cccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEec-CCCccccCCCCCCC
Q 010540 285 VRPE------------TET-------PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA-KGKSKTLPPMTDGK 344 (508)
Q Consensus 285 ~~~~------------~~~-------~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe-~g~i~Giv~~t~kD 344 (508)
.... ... .++++|.+++.++++++++.++++.|.+++.+.+||+|+ +|+++|++ |.+|
T Consensus 93 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Giv--t~~d 170 (330)
T 2v8q_E 93 ILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYIL--THKR 170 (330)
T ss_dssp HHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEE--CHHH
T ss_pred HHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEE--cHHH
Confidence 3210 011 234678899999999999999999999999999999999 99999999 9999
Q ss_pred ccccccccCCCC---C-Cccccccccccc-CCceeecCCCCCccchhhhhcccCCCCcccccccc-cccccCCCceEEee
Q 010540 345 KPKLNEAKGGDC---D-LTAPLLSKQDEK-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGII 418 (508)
Q Consensus 345 ll~~i~~~~~~~---~-l~~p~~~i~~~~-~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIV 418 (508)
+++.+....... . ...+..++.-.. ...+.++++.++.+..+.|..+..+. ++| + ++|+++|+|
T Consensus 171 l~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~------~~Vvd----~~~~l~Gii 240 (330)
T 2v8q_E 171 ILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSA------LPVVD----EKGRVVDIY 240 (330)
T ss_dssp HHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSE------EEEEC----TTSBEEEEE
T ss_pred HHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCe------EEEEC----CCCcEEEEE
Confidence 998765432211 1 111111111122 56788999999999999888764332 333 4 689999999
Q ss_pred chHHHHHHHhCCccCCCCccccc-c--------ceeEEeccccChHHHhhcC
Q 010540 419 TLEDVFEELLQEEIVDETDEYVD-V--------HKRIRVAAAAAASSVARAP 461 (508)
Q Consensus 419 TleDIleeivg~eI~dE~d~~~~-~--------~~~~~v~~~~~~~~~~~~~ 461 (508)
|..|+++.+.+ ...+..+.... . ..-+.+...+++.++.+.+
T Consensus 241 t~~dl~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m 291 (330)
T 2v8q_E 241 SKFDVINLAAE-KTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRL 291 (330)
T ss_dssp EGGGTGGGGGS-SCCCCCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHH
T ss_pred EHHHHHHHHhc-cccccccCcHHHHHhccccccCCCeEECCCCcHHHHHHHH
Confidence 99999998775 32222221111 1 1236778888887765544
No 14
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.82 E-value=4.3e-20 Score=161.30 Aligned_cols=104 Identities=30% Similarity=0.467 Sum_probs=92.0
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC--Ccccccccccccc
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIRRI 301 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~--~~~~V~dim~~~v 301 (508)
++.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++.... ...+++++| +++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCC
Confidence 3678999999977899999999999 999999999999999998754799999999999976432 346799997 567
Q ss_pred eeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 302 ~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 106 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVID 106 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEEC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 8999999999999999999999999999
No 15
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.82 E-value=1.9e-21 Score=196.45 Aligned_cols=243 Identities=12% Similarity=0.132 Sum_probs=182.7
Q ss_pred CCCCChhHHHHHHHhhcC-cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhc
Q 010540 206 GGELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT 284 (508)
Q Consensus 206 ~g~l~~~E~~~i~~vl~l-~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~ 284 (508)
.+.++++|+++++++++| .+.+|+|+|+|+.++++++.+.++. ++++.|.+++++++||++++.++++|+++.+|+..
T Consensus 9 ~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~ 87 (323)
T 3t4n_C 9 QEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFIN 87 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHH
Confidence 456788999999999998 9999999999999999999999999 99999999999999999987679999999999986
Q ss_pred cCC----C----------Ccccccc------cccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCC-----ccccCC
Q 010540 285 VRP----E----------TETPVSA------VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGK-----SKTLPP 339 (508)
Q Consensus 285 ~~~----~----------~~~~V~d------im~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~-----i~Giv~ 339 (508)
... . ....+.+ +|.++++++++++++.++++.|.+++.+.+||+|++|. ++|++
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Giv- 166 (323)
T 3t4n_C 88 VIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVL- 166 (323)
T ss_dssp HHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEE-
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEe-
Confidence 421 0 0112333 34678899999999999999999999999999999987 99999
Q ss_pred CCCCCccccccccCCCC-CCccccccccc-ccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEe
Q 010540 340 MTDGKKPKLNEAKGGDC-DLTAPLLSKQD-EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGI 417 (508)
Q Consensus 340 ~t~kDll~~i~~~~~~~-~l~~p~~~i~~-~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGI 417 (508)
|.+|+++.+.+..... ....+..++.. +....+.++++.++.+..+.|..+..+...++ + ++|+++|+
T Consensus 167 -t~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVv-----d----~~~~~~Gi 236 (323)
T 3t4n_C 167 -TQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPII-----D----ENGYLINV 236 (323)
T ss_dssp -EHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEE-----C----TTCBEEEE
T ss_pred -cHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEE-----C----CCCeEEEE
Confidence 9999997765332211 11112222211 23567899999999999999987643332222 4 68999999
Q ss_pred echHHHHHHHhCCccCCCCcccc-ccc--------eeEEeccccChHHHhhcC
Q 010540 418 ITLEDVFEELLQEEIVDETDEYV-DVH--------KRIRVAAAAAASSVARAP 461 (508)
Q Consensus 418 VTleDIleeivg~eI~dE~d~~~-~~~--------~~~~v~~~~~~~~~~~~~ 461 (508)
||..|+++.+.+ +..+..+... +.. .-+.+...+++.++.+.+
T Consensus 237 it~~dl~~~~~~-~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m 288 (323)
T 3t4n_C 237 YEAYDVLGLIKG-GIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNI 288 (323)
T ss_dssp EETTHHHHHHHT-THHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHH
T ss_pred EeHHHHHHHHhh-chhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHH
Confidence 999999998876 4432222111 111 237889999998876654
No 16
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.79 E-value=3.5e-20 Score=184.86 Aligned_cols=222 Identities=16% Similarity=0.138 Sum_probs=170.1
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEE
Q 010540 185 ALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVP 264 (508)
Q Consensus 185 ~~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~P 264 (508)
..+|.+||...+.. .. . ..+...+.+++.+.+|+++|++ +++++++++++. ++++.|.+++++++|
T Consensus 63 GivT~~Di~~~~~~----~~---~----~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lp 128 (296)
T 3ddj_A 63 GLLTTRDLLSTVES----YC---K----DSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLP 128 (296)
T ss_dssp EEEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEE
T ss_pred EEEeHHHHHHHhcc----cc---c----ccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEE
Confidence 45788887776531 00 0 0234455566678899999998 788999999998 999999999999999
Q ss_pred EeeCCCCcEEEEeEHhHHhccCCC--CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCC
Q 010540 265 VYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (508)
Q Consensus 265 V~~~~~d~ivGiv~~kDll~~~~~--~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~ 342 (508)
|++++ ++++|+++.+|++..... ...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.
T Consensus 129 Vvd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Giv--t~ 205 (296)
T 3ddj_A 129 VVDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIV--TV 205 (296)
T ss_dssp EECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EH
T ss_pred EEcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EH
Confidence 99865 889999999999875432 23579999999999999999999999999999999999999999999999 99
Q ss_pred CCccccccccCCCCC-Ccccccccccc-cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeech
Q 010540 343 GKKPKLNEAKGGDCD-LTAPLLSKQDE-KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITL 420 (508)
Q Consensus 343 kDll~~i~~~~~~~~-l~~p~~~i~~~-~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTl 420 (508)
+|+++.+......-. .......+.+. ...++.++++.++.+..+.|..+..+...++ + ++|+++|+||.
T Consensus 206 ~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv-----d----~~g~~~Giit~ 276 (296)
T 3ddj_A 206 VNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLIL-----N----KDNTIRGIITE 276 (296)
T ss_dssp HHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEE-----C----TTSCEEEEEEH
T ss_pred HHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-----C----CCCeEEEEEcH
Confidence 999977652111000 00000112222 3467889999999999999998754432222 4 78999999999
Q ss_pred HHHHHHHhCCccC
Q 010540 421 EDVFEELLQEEIV 433 (508)
Q Consensus 421 eDIleeivg~eI~ 433 (508)
.||++.+.+ ++.
T Consensus 277 ~Dil~~l~~-~~~ 288 (296)
T 3ddj_A 277 RDLLIALHH-ILV 288 (296)
T ss_dssp HHHHHHHHH-HHH
T ss_pred HHHHHHHHH-Hhc
Confidence 999999986 543
No 17
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=5.6e-19 Score=162.34 Aligned_cols=112 Identities=16% Similarity=0.251 Sum_probs=97.2
Q ss_pred hHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCC--
Q 010540 212 DETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET-- 289 (508)
Q Consensus 212 ~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~-- 289 (508)
.++..+.+. +.+++|+|+|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++.....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 334445444 468899999997 899999999999 99999999999999999876 8999999999998654221
Q ss_pred ------------------------cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 290 ------------------------ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 290 ------------------------~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
..+++++|.+++.+|++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd 143 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ 143 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE
Confidence 2468999999999999999999999999999999999998
No 18
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.78 E-value=9.4e-19 Score=174.07 Aligned_cols=117 Identities=15% Similarity=0.155 Sum_probs=107.6
Q ss_pred CCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHc-----CCcEEEEeeCCCCcEEEEeEHhH
Q 010540 207 GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR-----GHSRVPVYSGNPKNIIGLLLVKS 281 (508)
Q Consensus 207 g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~-----~~sr~PV~~~~~d~ivGiv~~kD 281 (508)
+.++.+++..+.+++.+.+.+|+++|++ +++++++++++. ++++.|.++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4678899999999999999999999998 899999999998 999999987 68999999875 89999999999
Q ss_pred HhccCCCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 282 LLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 282 ll~~~~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++... ...+++++|.+++++|++++++.++++.|++++.+.+||+|
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 237 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 237 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 98653 35679999989999999999999999999999999999999
No 19
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.76 E-value=9.7e-20 Score=179.35 Aligned_cols=220 Identities=14% Similarity=0.172 Sum_probs=163.6
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEE
Q 010540 185 ALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVP 264 (508)
Q Consensus 185 ~~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~P 264 (508)
..+|.+||...+... ...+.+...+ ..+++...+.+|+++|++ +++++++++++. ++++.|.+++++++|
T Consensus 50 Givt~~di~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~ 119 (280)
T 3kh5_A 50 GIITSMDIVDFMGGG----SKYNLIREKH---ERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAP 119 (280)
T ss_dssp EEEEHHHHHHHTTTS----GGGHHHHTTS---TTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEE
T ss_pred EEEEHHHHHHHhccc----chhhhhhhcc---ccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEE
Confidence 457888988866311 1111111111 122333447899999997 888999999999 999999999999999
Q ss_pred EeeCCCCcEEEEeEHhHHhccCCC---CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCC
Q 010540 265 VYSGNPKNIIGLLLVKSLLTVRPE---TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMT 341 (508)
Q Consensus 265 V~~~~~d~ivGiv~~kDll~~~~~---~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t 341 (508)
|++++ ++++|+++.+|++..... ...+++++|.+++.++++++++.++++.|.+++.+.+||+ ++|+++|++ |
T Consensus 120 Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Giv--t 195 (280)
T 3kh5_A 120 IVNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGII--T 195 (280)
T ss_dssp EECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEE--E
T ss_pred EEcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEE--E
Confidence 99875 899999999999875332 2347999998999999999999999999999999999999 789999999 9
Q ss_pred CCCccccccccCCCCC-----Cc-ccccccccc-cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCce
Q 010540 342 DGKKPKLNEAKGGDCD-----LT-APLLSKQDE-KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEV 414 (508)
Q Consensus 342 ~kDll~~i~~~~~~~~-----l~-~p~~~i~~~-~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~l 414 (508)
.+|+++.+........ .. .....+.+. ...++.++++.++.+..+.|..+..+...++ + ++|++
T Consensus 196 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv-----d----~~g~~ 266 (280)
T 3kh5_A 196 STDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVV-----D----ENLRI 266 (280)
T ss_dssp HHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEE-----C----TTCBE
T ss_pred HHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEE-----C----CCCeE
Confidence 9999977643211000 00 000112222 3567889999999999999998765443333 4 67899
Q ss_pred EEeechHHHHHHH
Q 010540 415 IGIITLEDVFEEL 427 (508)
Q Consensus 415 vGIVTleDIleei 427 (508)
+|+||..||++.+
T Consensus 267 ~Givt~~dil~~l 279 (280)
T 3kh5_A 267 KGIITEKDVLKYF 279 (280)
T ss_dssp EEEEEHHHHGGGG
T ss_pred EEEEeHHHHHHhh
Confidence 9999999999875
No 20
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.76 E-value=3.7e-18 Score=182.13 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=119.1
Q ss_pred cccHHHHHHHHHHhhhhhccC---------CCCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHH
Q 010540 186 LFRRAQLKALVTIHSQEAGKG---------GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKIL 256 (508)
Q Consensus 186 ~~s~eEL~~lv~~~~~e~~~~---------g~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~ 256 (508)
.++.+|+..+++.. .++ +.++++|++.+++++++++.+|+++|++ +++++++++++. ++++.+.
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46778888888632 233 6899999999999999999999999998 899999999999 9999999
Q ss_pred Hc-----CCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 257 AR-----GHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 257 ~~-----~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++ +++++||++++ ++++|+++.+|++... .+.+++++|.+++.+|+++++++++++.|++++.+.+||+|
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 86 47899999875 8999999999999753 35689999989999999999999999999999999999999
No 21
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.76 E-value=1.5e-18 Score=170.83 Aligned_cols=181 Identities=14% Similarity=0.202 Sum_probs=148.2
Q ss_pred cccc-ccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCC----------------
Q 010540 227 TAEE-AMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET---------------- 289 (508)
Q Consensus 227 ~V~d-IMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~---------------- 289 (508)
++++ +|++ +++++++++++. ++++.|.+++++++||++++.++++|+++.+|++......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 3444 5565 899999999999 9999999999999999987458999999999998764321
Q ss_pred --cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 290 --ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 290 --~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
+.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.+|+++.+.+...... .+.+
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~~~~~~~~~~~~------~v~~ 152 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLI--TERDVIRALLDKIDENE------VIDD 152 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEE--EHHHHHHHHGGGSCTTC------BSGG
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEE--EHHHHHHHHhhcCCCCC------CHHH
Confidence 3479999999999999999999999999999999999999999999999 99999987765443221 1222
Q ss_pred c-cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHh
Q 010540 368 E-KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (508)
Q Consensus 368 ~-~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeiv 428 (508)
. ....++++++.++.+..+.|..+..+. ++|. ++|+++|+||.+|+++.+.
T Consensus 153 ~m~~~~~~v~~~~~l~~~~~~~~~~~~~~------~~Vv----~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 YITRDVIVATPGERLKDVARTMVRNGFRR------LPVV----SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp GCBCSCCCBCTTCBHHHHHHHHHHHTCSE------EEEE----ETTEEEEEEEHHHHHHHHT
T ss_pred HhCCCCeEECCCCcHHHHHHHHHHcCCCE------EEEE----ECCEEEEEEEHHHHHHHHh
Confidence 2 356788999999999999998775433 3332 4799999999999999875
No 22
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.73 E-value=5.9e-18 Score=168.68 Aligned_cols=215 Identities=19% Similarity=0.171 Sum_probs=166.8
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC-------------
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE------------- 288 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~------------- 288 (508)
+....+|+|+|++ +++++++++++. ++++.|.+++++++||++ ++++|+++.+|++.....
T Consensus 16 ~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~ 89 (296)
T 3ddj_A 16 YFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLYH 89 (296)
T ss_dssp TTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHHH
T ss_pred hhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhHH
Confidence 4567899999998 888999999999 999999999999999997 789999999999976532
Q ss_pred -CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 289 -TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 289 -~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++.+.+..... .+.+
T Consensus 90 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGiv--t~~dl~~~~~~~~~~~-------~v~~ 160 (296)
T 3ddj_A 90 ISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIV--TEREFLLLYKDLDEIF-------PVKV 160 (296)
T ss_dssp HHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHGGGGGGSCCCC-------BHHH
T ss_pred HhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE--eHHHHHHhhhcccccc-------cHHH
Confidence 13579999999999999999999999999999999999999999999999 9999998765433221 1222
Q ss_pred c-cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccCCCC-----cccc-
Q 010540 368 E-KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDET-----DEYV- 440 (508)
Q Consensus 368 ~-~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~dE~-----d~~~- 440 (508)
. ......++++.++.+..+.|..+..+...++ + ++|+++|+||.+|+++.+.. .+.+-. +...
T Consensus 161 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv-----d----~~~~~~Givt~~dl~~~~~~-~~~~~~~~~~~~~~v~ 230 (296)
T 3ddj_A 161 FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVI-----D----DDNKVVGIVTVVNAIKQLAK-AVDKLDPDYFYGKVVK 230 (296)
T ss_dssp HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEE-----C----TTSCEEEEEEHHHHHHHHHH-HHHHTCTHHHHTCBHH
T ss_pred hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEE-----c----CCCEEEEEEEHHHHHHHHHH-HHhhcChhhhcCcCHH
Confidence 2 3556789999999999999987754333333 4 78999999999999998762 221100 0011
Q ss_pred ccc--eeEEeccccChHHHhhcC
Q 010540 441 DVH--KRIRVAAAAAASSVARAP 461 (508)
Q Consensus 441 ~~~--~~~~v~~~~~~~~~~~~~ 461 (508)
+.. .-+.+...+++.++.+.+
T Consensus 231 ~~m~~~~~~v~~~~~l~~a~~~m 253 (296)
T 3ddj_A 231 DVMVTNLVTIDELASVNRAAAEM 253 (296)
T ss_dssp HHSBCCCCBCCTTSBHHHHHHHH
T ss_pred HHhCCCCeEECCCCcHHHHHHHH
Confidence 111 136677888887776554
No 23
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.70 E-value=6.3e-17 Score=145.83 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=91.3
Q ss_pred HHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC---------
Q 010540 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------- 288 (508)
Q Consensus 218 ~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~--------- 288 (508)
++...+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.....
T Consensus 3 ~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 3 WEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp -------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred hhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHHh
Confidence 4455678899999999877888999999999 99999999999999999865 789999999999876543
Q ss_pred CcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 289 TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 289 ~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
...++.++|.+++.++++++++.++++.|.+++. +||+|
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd 119 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN 119 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc
Confidence 2467999999999999999999999999999876 88998
No 24
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.70 E-value=1.1e-16 Score=159.83 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=107.1
Q ss_pred CCChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHc-----CCcEEEEeeCCCCcEEEEeEHhHH
Q 010540 208 ELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR-----GHSRVPVYSGNPKNIIGLLLVKSL 282 (508)
Q Consensus 208 ~l~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~-----~~sr~PV~~~~~d~ivGiv~~kDl 282 (508)
.++.+|+..+.+++.+.+.+|+++|++ +++++++++++. ++++.|.++ +++++||++++ ++++|+|+.+|+
T Consensus 119 ~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dl 194 (286)
T 2oux_A 119 LLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDL 194 (286)
T ss_dssp TSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHH
T ss_pred cCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHH
Confidence 578889999999999999999999997 889999999999 999999987 88999999875 899999999999
Q ss_pred hccCCCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 283 LTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 283 l~~~~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+... ...+++++|.+++.+|++++++.++++.|.+++.+.+||+|
T Consensus 195 l~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 195 IVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp TTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 8753 35679999989999999999999999999999999999999
No 25
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.70 E-value=6.2e-17 Score=159.72 Aligned_cols=191 Identities=16% Similarity=0.189 Sum_probs=143.5
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhc-cCCCC----ccccccccc
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRPET----ETPVSAVSI 298 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~-~~~~~----~~~V~dim~ 298 (508)
.+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+++.+|++. ....+ ..+++++|.
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~ 133 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQ 133 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSB
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhC
Confidence 35789999997 678899999998 99999999999999999875 78999999999998 65432 467899998
Q ss_pred ccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCcc------cccc------cc-------CCC----
Q 010540 299 RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKP------KLNE------AK-------GGD---- 355 (508)
Q Consensus 299 ~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll------~~i~------~~-------~~~---- 355 (508)
+++.++++++++.++++.|.+++.+.+||+|++|.++|++ +.+|++ +... .. ...
T Consensus 134 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (282)
T 2yzq_A 134 RYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIV--DETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLF 211 (282)
T ss_dssp SCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEE--EGGGGGGCGGGCC-------------------------
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE--EHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHH
Confidence 8999999999999999999999999999999999999999 999998 3331 00 000
Q ss_pred --CCCcccccccccc-cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 356 --CDLTAPLLSKQDE-KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 356 --~~l~~p~~~i~~~-~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.....+...+.+. ...+..++++.++.+..+.|..+..+...++ + ++|+++|+||..||++.+..
T Consensus 212 ~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv-----d----~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 212 EKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVI-----R----GEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp -------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEE-----E----TTTEEEEEEEHHHHGGGGCC
T ss_pred hHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEE-----C----CCCCEEEEEeHHHHHHHHHh
Confidence 0000011122222 3566789999999999999987754432222 3 56899999999999988753
No 26
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.70 E-value=7.4e-17 Score=143.90 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=92.5
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC----------------
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---------------- 287 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~---------------- 287 (508)
...+|+++|+|+.+++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999977899999999999 99999999999999999875 79999999999986421
Q ss_pred -CCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 288 -ETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 288 -~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
....++.++|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd 123 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 123 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 123679999988899999999999999999999999999999
No 27
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.69 E-value=2.3e-17 Score=148.76 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=93.9
Q ss_pred HHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC--------C
Q 010540 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------T 289 (508)
Q Consensus 218 ~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~--------~ 289 (508)
.+..++...+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++..... .
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccc
Confidence 3445567788999999988999999999999 99999999999999999865 899999999999865422 1
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
..+++++|.+++.++++++++.++++.|.+++ .+||+|
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd 122 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc
Confidence 46799999899999999999999999998886 599998
No 28
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.69 E-value=9.8e-18 Score=165.48 Aligned_cols=177 Identities=18% Similarity=0.197 Sum_probs=127.3
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccceeec
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~~V~ 305 (508)
++|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.... ..+++++|.+++.+++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999996 888999999999 99999999999999999864 89999999999986543 4578999888889999
Q ss_pred CCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccc-cccccCCCCCCccccccccc-ccCCceeecCCCCCcc
Q 010540 306 SDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPK-LNEAKGGDCDLTAPLLSKQD-EKTESVVVDVDRPLSS 383 (508)
Q Consensus 306 ~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~-~i~~~~~~~~l~~p~~~i~~-~~~~~~~V~~~~~l~~ 383 (508)
+++++.++++.|.+++.+.+||+|++|+++|++ |.+|+++ .+.+..... ...+.+ +...++.++++.++.+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~di~~~~~~~~~~~~-----~~~v~~~m~~~~~~v~~~~~l~~ 147 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGIL--TVGDIIRRYFAKSEKYK-----GVEIEPYYQRYVSIVWEGTPLKA 147 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHHHHTTTTCSGGG-----GCBSTTTSBSCCCCEETTSBHHH
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EHHHHHHHHHhccCCcc-----cCcHHHHhCCCCEEECCCCCHHH
Confidence 999999999999999999999999999999999 9999998 665431110 111222 2356789999999999
Q ss_pred chhhhhcccCCCCcccccccc-cccccCCCceEEeechHHHHH
Q 010540 384 GSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFE 425 (508)
Q Consensus 384 ~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIVTleDIle 425 (508)
..+.|..+..+ +++| + ++|+++|+||..|+++
T Consensus 148 ~~~~~~~~~~~------~l~Vvd----~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 148 ALKALLLSNSM------ALPVVD----SEGNLVGIVDETDLLR 180 (282)
T ss_dssp HHHHHHTCSSS------EEEEEC----TTSCEEEEEEGGGGGG
T ss_pred HHHHHHHcCCc------EEEEEc----CCCeEEEEEEHHHHhh
Confidence 99988876432 2333 4 6899999999999984
No 29
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.69 E-value=1.8e-16 Score=139.59 Aligned_cols=104 Identities=13% Similarity=0.235 Sum_probs=91.8
Q ss_pred hcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhc-cCCC---Cccccccc
Q 010540 221 LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRPE---TETPVSAV 296 (508)
Q Consensus 221 l~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~-~~~~---~~~~V~di 296 (508)
+.|.+.+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++. .... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999986 888999999999 99999999999999999865 89999999999973 3322 24679999
Q ss_pred ccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 297 m~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
|.+++.++++++++.++++.|.+++.+.+ |+|
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd 109 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE 109 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC
Confidence 98999999999999999999999999988 998
No 30
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.69 E-value=1.7e-17 Score=167.52 Aligned_cols=187 Identities=16% Similarity=0.177 Sum_probs=145.1
Q ss_pred cccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCC----cEEEEeEHhHHhccCC-------CCccccccc
Q 010540 228 AEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK----NIIGLLLVKSLLTVRP-------ETETPVSAV 296 (508)
Q Consensus 228 V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d----~ivGiv~~kDll~~~~-------~~~~~V~di 296 (508)
+.++|++ +++++++++++. ++++.|.+++++++||++++.+ +++|+++.+|++.... ....+++++
T Consensus 116 ~~~~~~~--~~v~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~ 192 (323)
T 3t4n_C 116 ALGVDQL--DTASIHPSRPLF-EACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDL 192 (323)
T ss_dssp HTTC------CCCBCTTSBHH-HHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGT
T ss_pred HhCCCCC--CceEeCCCCcHH-HHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHc
Confidence 4556665 788999999998 9999999999999999986522 3999999999986421 123578898
Q ss_pred ---ccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccccc----
Q 010540 297 ---SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK---- 369 (508)
Q Consensus 297 ---m~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~---- 369 (508)
|.+++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.+|+++.+.+.... ....+..++....
T Consensus 193 ~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Gii--t~~dl~~~~~~~~~~-~~~~~v~~~m~~~~~~~ 269 (323)
T 3t4n_C 193 NIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVY--EAYDVLGLIKGGIYN-DLSLSVGEALMRRSDDF 269 (323)
T ss_dssp TCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--ETTHHHHHHHTTHHH-HTTSBHHHHGGGSCTTC
T ss_pred CCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEE--eHHHHHHHHhhchhh-hccCCHHHHHhhccccC
Confidence 888999999999999999999999999999999999999999 999999877543211 1111222222211
Q ss_pred CCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 370 TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 370 ~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
...+.++++.++.+..+.|..+..+...++ + ++|+++|+||..||++.+++
T Consensus 270 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv-----d----~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 270 EGVYTCTKNDKLSTIMDNIRKARVHRFFVV-----D----DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp CCCEEECTTCBHHHHHHHHHHSCCCEEEEE-----C----TTSBEEEEEEHHHHHHHHHH
T ss_pred CCCEEECCCCCHHHHHHHHHHhCCCEEEEE-----C----CCCcEEEEEEHHHHHHHHHh
Confidence 157899999999999999998755443333 4 78999999999999999987
No 31
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.69 E-value=5e-17 Score=140.00 Aligned_cols=100 Identities=11% Similarity=0.227 Sum_probs=91.4
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccceeec
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~~V~ 305 (508)
.+|+++|++ ++.++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++........+++++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 378999997 788999999999 99999999999999999865 89999999999997755555689999989999999
Q ss_pred CCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 306 SDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 306 ~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+++++.++++.|.+++.+.+||+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd 100 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVD 100 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEC
Confidence 999999999999999999999999
No 32
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.69 E-value=4.2e-17 Score=145.95 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=92.7
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC---------Cccc
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------TETP 292 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~---------~~~~ 292 (508)
.|.+.+|+++|+|..+++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++..... ...+
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 88 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEMK 88 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGCB
T ss_pred hhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcCC
Confidence 467789999999877899999999999 99999999999999999865 899999999999876532 2467
Q ss_pred ccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 293 V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.++|.+++.++++++++.++++.|.+++. +||+|
T Consensus 89 v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 89 VEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp GGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred HHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 999999999999999999999999998886 89998
No 33
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=7.6e-17 Score=147.16 Aligned_cols=110 Identities=12% Similarity=0.174 Sum_probs=97.1
Q ss_pred HHhhcCcccccccccccc-cceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC-----Ccc
Q 010540 218 SGALDLTEKTAEEAMTPI-ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TET 291 (508)
Q Consensus 218 ~~vl~l~~~~V~dIMtpr-~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~-----~~~ 291 (508)
+....+...+|+++|+|+ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|+++.... ...
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccC
Confidence 345568889999999984 5688999999999 99999999999999999865 789999999999865321 246
Q ss_pred cccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 292 ~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++.++|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE 131 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 79999999999999999999999999999999999999
No 34
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.67 E-value=2e-16 Score=137.93 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=91.9
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCc---cccccccccc
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETE---TPVSAVSIRR 300 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~---~~V~dim~~~ 300 (508)
.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ ++++|+++.+|+.+...++. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999997 788899999999 9999999999999999986 89999999999998765432 5699999999
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd 106 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLAD 106 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999999999999999
No 35
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.67 E-value=3e-16 Score=137.35 Aligned_cols=102 Identities=16% Similarity=0.236 Sum_probs=91.5
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC---Ccccccccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---TETPVSAVSIR 299 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~---~~~~V~dim~~ 299 (508)
|++.+|+++|++ ++.++++++++. ++++.|.+++++.+||++ + ++++|+++.+|++..... ...+++++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999998 788999999998 999999999999999998 4 799999999999865322 24679999988
Q ss_pred cceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 300 ~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 999999999999999999999999999999
No 36
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=2.2e-16 Score=145.25 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=91.9
Q ss_pred ccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC------------------
Q 010540 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR------------------ 286 (508)
Q Consensus 225 ~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~------------------ 286 (508)
..+|+++|+|+.+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999987899999999999 99999999999999999875 7999999999998532
Q ss_pred -------------CCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 287 -------------PETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 287 -------------~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.....+++++|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 136 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD 136 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 1124579999988899999999999999999999999999999
No 37
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.66 E-value=3.2e-16 Score=138.85 Aligned_cols=99 Identities=11% Similarity=0.186 Sum_probs=89.4
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCC--cEEEEeEHhHHhccCCC---Cccccccccccc
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK--NIIGLLLVKSLLTVRPE---TETPVSAVSIRR 300 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d--~ivGiv~~kDll~~~~~---~~~~V~dim~~~ 300 (508)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ + +++|+++.+|++..... ...++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999997 889999999999 99999999999999999875 5 89999999999875322 246799999999
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.+++++ ++.++++.|.+++.+.+||+|
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd 108 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVN 108 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEc
Confidence 9999999 999999999999999999999
No 38
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.65 E-value=2e-16 Score=141.73 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=92.9
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC----Ccccccccccccc
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----TETPVSAVSIRRI 301 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~----~~~~V~dim~~~v 301 (508)
.+|+++|+|+.+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|+++.... ...+++++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999877889999999999 99999999999999999865 899999999999875433 3467999998999
Q ss_pred eeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 302 ~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.++++++++.++++.|.+++.+.+||+|
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVAD 133 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999
No 39
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.65 E-value=5.6e-16 Score=136.33 Aligned_cols=103 Identities=17% Similarity=0.318 Sum_probs=91.3
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHH-hccCCC---Cccccccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSL-LTVRPE---TETPVSAVSI 298 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDl-l~~~~~---~~~~V~dim~ 298 (508)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||++++ ++++|+++.+|+ ...... ...+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 568899999987 788899999998 99999999999999999865 789999999999 765432 2467999998
Q ss_pred ccceeecCCCCHHHHHHHHHhCC-----CeEEEEEe
Q 010540 299 RRIPRVPSDMPLYDILNEFQKGS-----SHMAAVVK 329 (508)
Q Consensus 299 ~~v~~V~~~~~l~d~L~~m~~~~-----~~~a~VvD 329 (508)
+++.++++++++.++++.|.+++ .+.+||+|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd 116 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD 116 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC
Confidence 89999999999999999999999 99999999
No 40
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.65 E-value=2.3e-16 Score=142.77 Aligned_cols=104 Identities=18% Similarity=0.260 Sum_probs=91.8
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC---------Cccc
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------TETP 292 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~---------~~~~ 292 (508)
.+.+.+|+++|+++.+++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 577899999999877889999999999 99999999999999999875 799999999999875422 2467
Q ss_pred ccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 293 V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.++|.+++.++++++++.++++.|.+++. +||+|
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd 122 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN 122 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe
Confidence 999998999999999999999999998876 89998
No 41
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.64 E-value=2.1e-16 Score=160.07 Aligned_cols=188 Identities=16% Similarity=0.184 Sum_probs=147.0
Q ss_pred ccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC----------Cccccccc
Q 010540 227 TAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----------TETPVSAV 296 (508)
Q Consensus 227 ~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~----------~~~~V~di 296 (508)
+++++|++ +++++++++++. ++++.|.+++++++||++++.++++|+++.+|++..... ...+++++
T Consensus 119 ~~~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~ 195 (330)
T 2v8q_E 119 VYLQDSFK--PLVCISPNASLF-DAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEEL 195 (330)
T ss_dssp HHSSSSCC--CCCCBCTTSBHH-HHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHH
T ss_pred HHhhcccC--CceEeCCCCCHH-HHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHh
Confidence 46788986 788999999999 999999999999999998623889999999999865321 11334444
Q ss_pred --cc-ccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccc----cc
Q 010540 297 --SI-RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD----EK 369 (508)
Q Consensus 297 --m~-~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~----~~ 369 (508)
|. +++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++...+.... ....+..++.. +.
T Consensus 196 ~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Gii--t~~dl~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 272 (330)
T 2v8q_E 196 QIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIY--SKFDVINLAAEKTYN-NLDVSVTKALQHRSHYF 272 (330)
T ss_dssp TCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEE--EGGGTGGGGGSSCCC-CCSSBHHHHGGGCCSCC
T ss_pred cccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEE--EHHHHHHHHhccccc-cccCcHHHHHhcccccc
Confidence 43 7888999999999999999999999999999999999999 999999877644221 11122222221 13
Q ss_pred CCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 370 TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 370 ~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
...++++++.++.+..+.|..+..+...++ + ++|+++|+||..||++.+..
T Consensus 273 ~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv-----d----~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 273 EGVLKCYLHETLEAIINRLVEAEVHRLVVV-----D----EHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp CSCCEECTTSBHHHHHHHHHHHTCSEEEEE-----C----TTSBEEEEEEHHHHHHHHHS
T ss_pred CCCeEECCCCcHHHHHHHHHHCCCcEEEEE-----c----CCCcEEEEEeHHHHHHHHHh
Confidence 678899999999999999988754443333 4 67999999999999999874
No 42
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.64 E-value=7.3e-16 Score=135.34 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=89.6
Q ss_pred ccccccccc-cceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhc-cCC----CCccccccccccc
Q 010540 227 TAEEAMTPI-ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRP----ETETPVSAVSIRR 300 (508)
Q Consensus 227 ~V~dIMtpr-~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~-~~~----~~~~~V~dim~~~ 300 (508)
+|+++|+|+ .+++++++++++. ++++.|.+++++.+||++ + ++++|+++.+|++. ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999965 6889999999999 999999999999999998 4 79999999999985 222 1346899999999
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 112 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD 112 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999998
No 43
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.64 E-value=8.2e-16 Score=138.71 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=90.3
Q ss_pred cccccccccc----cceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC-----Cccccccc
Q 010540 226 KTAEEAMTPI----ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAV 296 (508)
Q Consensus 226 ~~V~dIMtpr----~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~-----~~~~V~di 296 (508)
.+|+++|+|+ .+++++++++++. ++++.|.+++++.+||.+ .++++|+++.+|+++.... ...+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999986 6789999999999 999999999999999964 3899999999999875422 34679999
Q ss_pred ccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 297 m~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 999999999999999999999999999999998
No 44
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.63 E-value=1.6e-16 Score=161.05 Aligned_cols=188 Identities=12% Similarity=0.111 Sum_probs=146.7
Q ss_pred ccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCc----EEEEeEHhHHhccCCC-------Ccccccc--
Q 010540 229 EEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKN----IIGLLLVKSLLTVRPE-------TETPVSA-- 295 (508)
Q Consensus 229 ~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~----ivGiv~~kDll~~~~~-------~~~~V~d-- 295 (508)
+++|++..+++++++++++. ++++.|.+++++++||++++.++ ++|+++.+|++..... ...++++
T Consensus 110 ~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~ 188 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLM-DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMT 188 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHH-HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSS
T ss_pred HhhccCCCceeeeCCCCcHH-HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhC
Confidence 45787655568899999998 99999999999999999865344 9999999999865321 1356888
Q ss_pred -cccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccccc----C
Q 010540 296 -VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK----T 370 (508)
Q Consensus 296 -im~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~----~ 370 (508)
+|.+++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.+|+++.+.+.... ....+..++.... .
T Consensus 189 ~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~-~~~~~v~~~m~~~~~~~~ 265 (334)
T 2qrd_G 189 IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVY--ESVDVMHLIQDGDYS-NLDLSVGEALLKRPANFD 265 (334)
T ss_dssp CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--ETHHHHHHHTTSCGG-GGGSBHHHHHTTCCTTCC
T ss_pred CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEE--EHHHHHHHhhccccc-cccCcHHHHHhcccccCC
Confidence 4788999999999999999999999999999999999999999 999999876543211 1111111111110 3
Q ss_pred CceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 371 ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 371 ~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.+++++++.++.+..+.|..+..+...++ + ++|+++|+||..||++.+.+
T Consensus 266 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv-----d----~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 266 GVHTCRATDRLDGIFDAIKHSRVHRLFVV-----D----ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CCCEECTTCBHHHHHHHHHHSCCCEEEEE-----C----TTCBEEEEEEHHHHHHHHHS
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEE-----C----CCCeEEEEEeHHHHHHHHHh
Confidence 67899999999999999988754433232 4 68999999999999999986
No 45
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=1e-15 Score=138.41 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=91.2
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcE-EEEeeCCCCcEEEEeEHhHHhccC--------------
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSR-VPVYSGNPKNIIGLLLVKSLLTVR-------------- 286 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr-~PV~~~~~d~ivGiv~~kDll~~~-------------- 286 (508)
.+...+|+++|++ +++++++++++. ++++.|.+++++. +||++++ +++|+++.+|++...
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4677899999997 889999999999 9999999999999 9999874 899999999998642
Q ss_pred -----CCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 287 -----PETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 287 -----~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.....+++++|.+ +.++++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD 133 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc
Confidence 1234679999888 89999999999999999999999999999
No 46
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.62 E-value=1.7e-15 Score=137.33 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=90.6
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC----CCccccccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP----ETETPVSAVSI 298 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~----~~~~~V~dim~ 298 (508)
+.+.+|+++|++ . +++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++.... ....+++++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 467899999985 4 4899999999 99999999999999999865 89999999999987532 13468999998
Q ss_pred c--cceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 299 R--RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 299 ~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+ ++.++++++++.++++.|.+++.+.+||+|
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 121 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIK 121 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 7 889999999999999999999999999999
No 47
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.61 E-value=7.4e-16 Score=134.83 Aligned_cols=103 Identities=14% Similarity=0.231 Sum_probs=89.3
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHh-ccCCC----Ccccccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL-TVRPE----TETPVSAVS 297 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll-~~~~~----~~~~V~dim 297 (508)
+.-.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+++.+|++ ..... ...+++++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELA 80 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHh
Confidence 344689999987 788899999999 99999999999999999765 7899999999998 33322 246799999
Q ss_pred cccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 298 IRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 298 ~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 112 (133)
T 1y5h_A 81 RDSIYYVDANASIQEMLNVMEEHQVRRVPVIS 112 (133)
T ss_dssp TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE
Confidence 89999999999999999999999999999999
No 48
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.61 E-value=1.3e-15 Score=131.50 Aligned_cols=99 Identities=14% Similarity=0.205 Sum_probs=88.4
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC----Ccccccccccccc
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----TETPVSAVSIRRI 301 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~----~~~~V~dim~~~v 301 (508)
++|+++|++ ++.++++++++. ++++.|.+++++.+||++ + ++++|+++.+|++..... ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 368999997 788999999999 999999999999999998 4 899999999999865321 2467999998999
Q ss_pred eeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 302 ~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 103 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEE 103 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 9999999999999999999999999999
No 49
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.61 E-value=1.5e-15 Score=141.05 Aligned_cols=100 Identities=23% Similarity=0.262 Sum_probs=90.7
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC-----CCccccccccccc
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP-----ETETPVSAVSIRR 300 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~-----~~~~~V~dim~~~ 300 (508)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 689999986 888999999999 99999999999999999865 78999999999987543 2346799999889
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 113 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVD 113 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 99999999999999999999999999999
No 50
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.60 E-value=2.5e-15 Score=136.37 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=90.8
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC------------CCcc
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP------------ETET 291 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~------------~~~~ 291 (508)
...+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999997 788899999999 99999999999999999865 78999999999986421 2346
Q ss_pred cccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 292 ~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++.++|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 116 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA 116 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 79999999999999999999999999999999999999
No 51
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.59 E-value=2.4e-15 Score=132.97 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=88.1
Q ss_pred Cccccccc---ccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC-----Cccccc
Q 010540 223 LTEKTAEE---AMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVS 294 (508)
Q Consensus 223 l~~~~V~d---IMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~-----~~~~V~ 294 (508)
+-+.++++ +|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++..... ...++.
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45667888 7875 788999999999 99999999999999999865 889999999999875322 246789
Q ss_pred ccccc------cceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 295 AVSIR------RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 295 dim~~------~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++|.+ ++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 121 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 121 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 98875 688999999999999999999999999999
No 52
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.58 E-value=4e-15 Score=137.49 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=90.9
Q ss_pred Ccccccccccccccc--eEEE--eCCCCchHHHHHHHHHcCCcEEEEee-CCCCcEEEEeEHhHHhccCC----------
Q 010540 223 LTEKTAEEAMTPIES--TFSL--DVNSKLDWEAMGKILARGHSRVPVYS-GNPKNIIGLLLVKSLLTVRP---------- 287 (508)
Q Consensus 223 l~~~~V~dIMtpr~~--vv~v--~~~~tl~~eal~~~~~~~~sr~PV~~-~~~d~ivGiv~~kDll~~~~---------- 287 (508)
+.+.+|+++|++..+ ++++ ++++++. ++++.|.+++++.+||++ ++.++++|+|+.+|++....
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 367899999998533 6778 9999998 999999999999999993 23489999999999986521
Q ss_pred ------------------CCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 288 ------------------ETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 288 ------------------~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
....++.++|.+++.+|++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 146 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH 146 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 234679999988999999999999999999999999999998
No 53
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.58 E-value=3.1e-15 Score=135.31 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=91.2
Q ss_pred HHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeC-CCCcEEEEeEHhHHhccCCC--------
Q 010540 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSG-NPKNIIGLLLVKSLLTVRPE-------- 288 (508)
Q Consensus 218 ~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~-~~d~ivGiv~~kDll~~~~~-------- 288 (508)
.+.+.+.+.+|+++|++ +++++++++++. ++++.|.+++++.+||+++ +.++++|+++.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 34556788999999998 788899999999 9999999999999999986 24889999999999865422
Q ss_pred Cccccccccccc------ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 289 TETPVSAVSIRR------IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 289 ~~~~V~dim~~~------v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
...++.++|.++ +.++++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 128 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS 128 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE
Confidence 124688888765 78899999999999999999999999998
No 54
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.57 E-value=7.5e-15 Score=131.88 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=88.4
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC-----Ccccccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVS 297 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~-----~~~~V~dim 297 (508)
+.+.+|+++ .+++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|++..... ...++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 466788888 3788899999999 99999999999999999865 889999999999875322 235789988
Q ss_pred c------ccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 298 I------RRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 298 ~------~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
. +++.++++++++.++++.|.+++.+.+||+|
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD 131 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC
Confidence 5 7889999999999999999999999999999
No 55
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.56 E-value=1.9e-15 Score=166.83 Aligned_cols=104 Identities=20% Similarity=0.115 Sum_probs=91.4
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHH-HcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCc------------
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKIL-ARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETE------------ 290 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~-~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~------------ 290 (508)
.+.+|+|+|+||+++.+++++++++ |+.+.|. +++++++||+|++ ++++|+|+.+|+.+......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999988999999999999 9999999 7999999999875 89999999999987543210
Q ss_pred ---------------------------------------ccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 291 ---------------------------------------TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 291 ---------------------------------------~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.+++++|.+++.+|++++++.++++.|++++.+++||+|
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve 606 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE 606 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE
Confidence 137789999999999999999999999999999999994
No 56
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.55 E-value=1.9e-14 Score=154.28 Aligned_cols=149 Identities=13% Similarity=0.164 Sum_probs=118.8
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCC
Q 010540 186 LFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGH 260 (508)
Q Consensus 186 ~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~ 260 (508)
.++++||...+... +..|.+. +++++++++++++ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 56788999888632 2223344 6778888888654 789997 888999999998 99999999999
Q ss_pred cEEEEeeC-CCCcEEEEeEHhHHhccCCCCcccccccccc-cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccC
Q 010540 261 SRVPVYSG-NPKNIIGLLLVKSLLTVRPETETPVSAVSIR-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (508)
Q Consensus 261 sr~PV~~~-~~d~ivGiv~~kDll~~~~~~~~~V~dim~~-~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv 338 (508)
+++||+++ +.++++|+|+.+|++... ..+.+++++|.+ ++.++++++++.++++.|++++.+.+||+|++|+++|++
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGiv 200 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLI 200 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEE
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 99999982 348999999999998653 345789999987 899999999999999999999999999999555555555
Q ss_pred CCCCCCccccc
Q 010540 339 PMTDGKKPKLN 349 (508)
Q Consensus 339 ~~t~kDll~~i 349 (508)
|.+|+++.+
T Consensus 201 --t~~Dil~~~ 209 (491)
T 1zfj_A 201 --TIKDIEKVI 209 (491)
T ss_dssp --EHHHHHHHH
T ss_pred --EHHHHHHHH
Confidence 444444433
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.54 E-value=3.7e-14 Score=135.27 Aligned_cols=108 Identities=12% Similarity=0.047 Sum_probs=93.8
Q ss_pred ccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccceee
Q 010540 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRV 304 (508)
Q Consensus 225 ~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~~V 304 (508)
.-+++++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|+..... ..+++++|.+++.++
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v 85 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFV 85 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCE
T ss_pred ccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEE
Confidence 3478999987 888999999999 99999999999999999865 88999999999987654 467999999999999
Q ss_pred cCCCCHHHHHHHHHhCCCeEEEEEecCCCccccC
Q 010540 305 PSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (508)
Q Consensus 305 ~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv 338 (508)
++++++.++++.|.+++.+.+||+|++|+++|++
T Consensus 86 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGii 119 (213)
T 1vr9_A 86 HEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAV 119 (213)
T ss_dssp ETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEE
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEE
Confidence 9999999999999999999999999444444444
No 58
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.52 E-value=3.4e-14 Score=152.67 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=120.6
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcC
Q 010540 185 ALFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (508)
Q Consensus 185 ~~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~ 259 (508)
..+|++++...+...+ .-|.|. +++.+++.++.. .+++|++ +++++++++++. ++++.|.+++
T Consensus 76 dtvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~ 143 (511)
T 3usb_A 76 DTVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYR 143 (511)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHC
T ss_pred hhhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcC
Confidence 3567888877665221 113332 345556777754 5577876 788999999999 9999999999
Q ss_pred CcEEEEeeC--CCCcEEEEeEHhHHhccCCCCcccccccccc-cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccc
Q 010540 260 HSRVPVYSG--NPKNIIGLLLVKSLLTVRPETETPVSAVSIR-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKT 336 (508)
Q Consensus 260 ~sr~PV~~~--~~d~ivGiv~~kDll~~~~~~~~~V~dim~~-~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~G 336 (508)
++++||+++ + ++++|+|+.+|+... .....+++++|.+ +++++++++++.++++.|++++.+.+||+|++|.++|
T Consensus 144 ~s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~G 221 (511)
T 3usb_A 144 ISGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQG 221 (511)
T ss_dssp CSEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred CcEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEee
Confidence 999999986 4 899999999999853 3345789999987 8999999999999999999999999999998888888
Q ss_pred cCCCCCCCcccccc
Q 010540 337 LPPMTDGKKPKLNE 350 (508)
Q Consensus 337 iv~~t~kDll~~i~ 350 (508)
++ |.+|+++.+.
T Consensus 222 iI--T~~Dil~~~~ 233 (511)
T 3usb_A 222 LI--TIKDIEKVIE 233 (511)
T ss_dssp EE--EHHHHHHHHH
T ss_pred ec--cHHHHHHhhh
Confidence 88 8888876654
No 59
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.51 E-value=5.1e-15 Score=158.51 Aligned_cols=150 Identities=16% Similarity=0.217 Sum_probs=113.9
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCC-----ChhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcC
Q 010540 185 ALFRRAQLKALVTIHSQEAGKGGEL-----THDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (508)
Q Consensus 185 ~~~s~eEL~~lv~~~~~e~~~~g~l-----~~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~ 259 (508)
..+|++++...+..+ +.-|.| .++++++++++ ++++++|++ +++++++++++. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 457889988877532 112334 56778889888 566889986 889999999999 9999999999
Q ss_pred CcEEEEeeCCCCcEEEEeEHhHHhccCCCCccccccccc-c-cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCcccc
Q 010540 260 HSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI-R-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (508)
Q Consensus 260 ~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~-~-~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Gi 337 (508)
++++||++++ ++++|+|+.+|+... .....+++++|. + +++++++++++.++++.|++++.+.+||+|++|+++|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999999875 899999999999843 234578999987 4 58999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccc
Q 010540 338 PPMTDGKKPKLNE 350 (508)
Q Consensus 338 v~~t~kDll~~i~ 350 (508)
+ |.+|+++...
T Consensus 198 I--T~~DIl~~~~ 208 (496)
T 4fxs_A 198 I--TAKDFHKAES 208 (496)
T ss_dssp E--CCC-----CC
T ss_pred e--hHhHHHHhhc
Confidence 9 9999997654
No 60
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.47 E-value=3.8e-14 Score=137.63 Aligned_cols=119 Identities=15% Similarity=0.153 Sum_probs=100.7
Q ss_pred ccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC----------------
Q 010540 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------------- 288 (508)
Q Consensus 225 ~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~---------------- 288 (508)
..+|+|+|++ ++.++++++++. ++++.|.+++++.+||++++ ++++|+++.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999987 788999999998 99999999999999999875 899999999999864210
Q ss_pred --------------------------------------------------------------------------------
Q 010540 289 -------------------------------------------------------------------------------- 288 (508)
Q Consensus 289 -------------------------------------------------------------------------------- 288 (508)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------Cccccccccc-ccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCcc
Q 010540 289 ---------------------TETPVSAVSI-RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKP 346 (508)
Q Consensus 289 ---------------------~~~~V~dim~-~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll 346 (508)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.+|++
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Gii--t~~dll 239 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSI--ARFHLI 239 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEE--ECC---
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEE--EHHHhh
Confidence 0235788888 8999999999999999999999999999999999999999 999998
Q ss_pred ccc
Q 010540 347 KLN 349 (508)
Q Consensus 347 ~~i 349 (508)
+..
T Consensus 240 ~~~ 242 (245)
T 3l2b_A 240 STH 242 (245)
T ss_dssp ---
T ss_pred chh
Confidence 643
No 61
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.46 E-value=1e-13 Score=149.81 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=89.0
Q ss_pred CcccccccccccccceEEEeCC-CCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC----CCcccccccc
Q 010540 223 LTEKTAEEAMTPIESTFSLDVN-SKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP----ETETPVSAVS 297 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~-~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~----~~~~~V~dim 297 (508)
+.+.+|+++|++ ++++++++ +++. ++++.|.+++++++||++++.++++|+|+.+|+++... ....+|+++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999997 88899999 9999 99999999999999999833489999999999986432 2346899999
Q ss_pred cccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 298 IRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 298 ~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.+++.+|++++++.++++.|.+++ ++||+|
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd 487 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILG 487 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEe
Confidence 999999999999999999997666 479998
No 62
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.46 E-value=7.8e-15 Score=157.06 Aligned_cols=145 Identities=13% Similarity=0.195 Sum_probs=22.6
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCC
Q 010540 186 LFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGH 260 (508)
Q Consensus 186 ~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~ 260 (508)
.++.+|+...+... +..|.+. +++++++++++++.+ +|++ +++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRAER-----LIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcchhh-----cccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 46778888877521 1123343 577889999987754 7885 899999999999 99999999999
Q ss_pred cEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCC
Q 010540 261 SRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPM 340 (508)
Q Consensus 261 sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~ 340 (508)
+++||+++ ++++|+|+.+|++. ....+++++|.+++.++++++++.++++.|++++.+.+||+|++|+++|++
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGii-- 197 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLI-- 197 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEE--
Confidence 99999986 89999999999986 345679999988899999999999999999999999999999888888988
Q ss_pred CCCCccccc
Q 010540 341 TDGKKPKLN 349 (508)
Q Consensus 341 t~kDll~~i 349 (508)
|.+|+++..
T Consensus 198 T~~Dil~~~ 206 (486)
T 2cu0_A 198 TMSDLVARK 206 (486)
T ss_dssp ---------
T ss_pred EHHHHHHhh
Confidence 888887654
No 63
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.44 E-value=1.3e-14 Score=155.76 Aligned_cols=156 Identities=10% Similarity=0.073 Sum_probs=19.6
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-hhHHHHHHHhhcCcccccccc-cccccceEEEeCCCCchHHHHHHHHHcCCcEE
Q 010540 186 LFRRAQLKALVTIHSQEAGKGGELT-HDETTIISGALDLTEKTAEEA-MTPIESTFSLDVNSKLDWEAMGKILARGHSRV 263 (508)
Q Consensus 186 ~~s~eEL~~lv~~~~~e~~~~g~l~-~~E~~~i~~vl~l~~~~V~dI-Mtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~ 263 (508)
.++++++...+...+..+--...++ +++++++.++.. .++ |++ +++++++++++. ++++.|.+++++++
T Consensus 61 ~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s~~ 131 (503)
T 1me8_A 61 SVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHNTV 131 (503)
T ss_dssp TTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHT------TTC---------------------------------
T ss_pred hhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcCceEE
Confidence 4677888777752110000000122 456777766543 455 998 889999999999 99999999999999
Q ss_pred EEeeCC--CCcEEEEeEHhHHhccCCCCccccccccccc--ceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCC
Q 010540 264 PVYSGN--PKNIIGLLLVKSLLTVRPETETPVSAVSIRR--IPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPP 339 (508)
Q Consensus 264 PV~~~~--~d~ivGiv~~kDll~~~~~~~~~V~dim~~~--v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~ 339 (508)
||++++ .++++|+|+.+|++........+++++|.++ ++++++++++.++++.|++++.+.+||+|++|+++|++
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiI- 210 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIV- 210 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEE-
Confidence 999864 3789999999999853223346799999876 99999999999999999999999999999999999999
Q ss_pred CCCCCcccccccc
Q 010540 340 MTDGKKPKLNEAK 352 (508)
Q Consensus 340 ~t~kDll~~i~~~ 352 (508)
|.+|+++.+...
T Consensus 211 -T~~Dil~~~~~~ 222 (503)
T 1me8_A 211 -FRKDYDRSQVCH 222 (503)
T ss_dssp ------------C
T ss_pred -EecHHHHhhhcc
Confidence 999999776533
No 64
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.44 E-value=2e-13 Score=133.54 Aligned_cols=60 Identities=8% Similarity=0.073 Sum_probs=53.7
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCC-CcEEEEeEHhHHhc
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNP-KNIIGLLLVKSLLT 284 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~-d~ivGiv~~kDll~ 284 (508)
...+++|+|+|++ +++++.+++++. ++.+.|.+++++++||++++. ++++|+|+.+|++.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3567899999997 899999999999 999999999999999998642 57999999999975
No 65
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.39 E-value=6.3e-14 Score=149.87 Aligned_cols=149 Identities=16% Similarity=0.203 Sum_probs=22.7
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcC
Q 010540 185 ALFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (508)
Q Consensus 185 ~~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~ 259 (508)
..+|++++...+...+ .-|.|. +++++++.++ ++++++|++ +++++++++++. ++++.|.+++
T Consensus 51 ~tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 3578889888775321 123333 5567777777 457889986 888999999999 9999999999
Q ss_pred CcEEEEeeCCCCcEEEEeEHhHHhccCCCCccccccccc-c-cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCcccc
Q 010540 260 HSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI-R-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (508)
Q Consensus 260 ~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~-~-~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Gi 337 (508)
++++||++ + ++++|+|+.+|+... .....+++++|. + +++++++++++.++++.|++++.+.+||+|++|+++|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGi 195 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGL 195 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 99999998 3 899999999999643 234578999988 4 68999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccc
Q 010540 338 PPMTDGKKPKLNE 350 (508)
Q Consensus 338 v~~t~kDll~~i~ 350 (508)
+ |.+|+++...
T Consensus 196 I--T~~Dil~~~~ 206 (490)
T 4avf_A 196 V--TFRDIEKAKT 206 (490)
T ss_dssp -------------
T ss_pred E--ehHHhhhhcc
Confidence 9 9999997654
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.16 E-value=5.2e-12 Score=135.45 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=13.2
Q ss_pred CChh-HHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC
Q 010540 209 LTHD-ETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (508)
Q Consensus 209 l~~~-E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~ 287 (508)
++.+ .++.+.++. +++++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|+... .
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-~ 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-K 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-c
Confidence 3443 344565554 46789987 889999999999 99999999999999999865 789999999999863 2
Q ss_pred CCcccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCcccccccc
Q 010540 288 ETETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAK 352 (508)
Q Consensus 288 ~~~~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~ 352 (508)
....+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.+|+++.+...
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI--t~~Dll~~~~~~ 216 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLI--TIKDIMSVIEHP 216 (494)
T ss_dssp -----------------------------------------------------------CHHHHTCT
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE--EHHHHHhhhccc
Confidence 234679999987 899999999999999999999999999999999999999 999999877654
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.07 E-value=2.1e-11 Score=128.58 Aligned_cols=127 Identities=12% Similarity=0.218 Sum_probs=9.3
Q ss_pred hHHHHHHHhhcCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCC--CCcEEEEeEHhHHhccCCCC
Q 010540 212 DETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN--PKNIIGLLLVKSLLTVRPET 289 (508)
Q Consensus 212 ~E~~~i~~vl~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~--~d~ivGiv~~kDll~~~~~~ 289 (508)
++.++++++-++.. .|+. +.+++.++.++. |+++.+.+++++.+||+++. .++++||++-+|+... +.
T Consensus 129 ~Qa~~V~~VKr~e~-----g~i~--dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d~ 198 (556)
T 4af0_A 129 EQAAMVRRVKKYEN-----GFIT--DPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--DA 198 (556)
T ss_dssp HHHHHHHHHHHCCC------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccc-----CccC--CCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--cc
Confidence 45677888766654 4543 678999999999 99999999999999999852 3689999999998753 44
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCcccccc
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNE 350 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~ 350 (508)
..+|+++|++++++++++.+++++.+.|++++...+||||+.|+++|++ |.||+++...
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlI--T~kDi~k~~~ 257 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLV--ARSDLLKNQN 257 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEE--Eechhhhhhh
Confidence 5789999999999999999999999999999999999999999999999 9999986553
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.06 E-value=1.5e-11 Score=132.47 Aligned_cols=121 Identities=12% Similarity=0.203 Sum_probs=72.5
Q ss_pred cccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCC--CCcEEEEeEHhHHhccCC-CCcccccccccc--c
Q 010540 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN--PKNIIGLLLVKSLLTVRP-ETETPVSAVSIR--R 300 (508)
Q Consensus 226 ~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~--~d~ivGiv~~kDll~~~~-~~~~~V~dim~~--~ 300 (508)
++++++|++ +++++++++++. ++++.|.+++++.+||++++ .++++|+|+.+|+..... ....+++++|.+ +
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~ 184 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIE 184 (514)
T ss_dssp HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBC
T ss_pred hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCC
Confidence 368899986 678899999999 99999999999999999863 378999999999976421 234679999987 8
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccc
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEA 351 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~ 351 (508)
++++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++.+..
T Consensus 185 ~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI--t~~Dll~~~~~ 233 (514)
T 1jcn_A 185 LVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAII--ARTDLKKNRDY 233 (514)
T ss_dssp CCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC------CCCCSSCCCC
T ss_pred CeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEE--EHHHHHHHhhC
Confidence 99999999999999999999999999999999999999 99999977653
No 69
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.81 E-value=1.2e-09 Score=105.67 Aligned_cols=59 Identities=8% Similarity=0.091 Sum_probs=54.6
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCcccccc
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNE 350 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~ 350 (508)
..+|+++|.+++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++.+.
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Gii--t~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGML--STSNITATYM 64 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEE--EHHHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999999999 9999987654
No 70
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.63 E-value=1.1e-08 Score=109.45 Aligned_cols=115 Identities=12% Similarity=0.008 Sum_probs=82.3
Q ss_pred cccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccccC-
Q 010540 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKT- 370 (508)
Q Consensus 292 ~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~- 370 (508)
.++++|.++++++++++++.++++.|.+++...+||+|+.|+++|+| |.+|+..... +...+.+.+.
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiV--t~rDL~~~~~----------~~~~v~diM~p 157 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGII--TGRDVRFVTD----------LTKSVAAVMTP 157 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEE--EHHHHTTCCC----------TTSBGGGTSEE
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEE--EHHHHhhccc----------CCCcHHHHhcC
Confidence 46778899999999999999999999999999999999999999999 9999863211 1112333344
Q ss_pred --CceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHH
Q 010540 371 --ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEEL 427 (508)
Q Consensus 371 --~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleei 427 (508)
+.++++++.++.+.++.|+.++.+...+++ |+|+++|+||.+||++..
T Consensus 158 ~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---------e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 158 KERLATVKEGATGAEVQEKMHKARVEKILVVN---------DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp GGGCCEEECC----CGGGTCC---CCCEEEEC---------TTSBCCEEECCC-----C
T ss_pred CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc---------CCCCEEEeehHhHHHHhh
Confidence 578999999999999999988766655555 899999999999999863
No 71
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.62 E-value=6.3e-08 Score=75.46 Aligned_cols=65 Identities=12% Similarity=0.239 Sum_probs=54.7
Q ss_pred ceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC-C----Ccccccccccccceee
Q 010540 237 STFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP-E----TETPVSAVSIRRIPRV 304 (508)
Q Consensus 237 ~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~-~----~~~~V~dim~~~v~~V 304 (508)
+++++++++++. |+++.|.+++++.+||.++ ++++|+++.+|+++... . .+.+|+++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999999 9999999999999999985 78999999999975432 2 2357999999887664
No 72
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.44 E-value=7.4e-08 Score=87.98 Aligned_cols=123 Identities=11% Similarity=0.034 Sum_probs=75.4
Q ss_pred HHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCccccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEE
Q 010540 250 EAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAV 327 (508)
Q Consensus 250 eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~V 327 (508)
+.++.+.+.+.....+-.++.+.+.+++..++ .+++++|. ++++++++++++.++++.|.+++.+.+||
T Consensus 10 ~el~~l~~~~~~~g~l~~~e~~~i~~~~~l~~---------~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pV 80 (172)
T 3lhh_A 10 EDIQAMLQEGSSAGVIEHNEHAMVKNVFRLDE---------RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPV 80 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHhccCC---------CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence 44555555444433333344455666666554 34899998 78899999999999999999999999999
Q ss_pred EecC-CCccccCCCCCCCccccccccCCCCCCcccccccccccCCceeecCCCCCccchhhhhcc
Q 010540 328 VKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSS 391 (508)
Q Consensus 328 vDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~~~~~V~~~~~l~~~~~~~~~~ 391 (508)
+|+. |+++|++ |.+|++....... .. .+.+.+..+.++++++++.+..+.|..+
T Consensus 81 vd~~~~~lvGiv--t~~dl~~~~~~~~-----~~---~v~~im~~~~~v~~~~~l~~a~~~m~~~ 135 (172)
T 3lhh_A 81 CRNNVDDMVGII--SAKQLLSESIAGE-----RL---ELVDLVKNCNFVPNSLSGMELLEHFRTT 135 (172)
T ss_dssp ESSSTTSEEEEE--EHHHHHHHHHTTC-----CC---CGGGGCBCCEEEETTCCHHHHHHHHHHH
T ss_pred EeCCCCeEEEEE--EHHHHHHHHhhcC-----cc---cHHHHhcCCeEeCCCCCHHHHHHHHHHc
Confidence 9988 9999999 9999997765332 11 2233336788999999999999998877
No 73
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.41 E-value=3e-08 Score=105.93 Aligned_cols=114 Identities=14% Similarity=0.069 Sum_probs=2.7
Q ss_pred cccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccccC-
Q 010540 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKT- 370 (508)
Q Consensus 292 ~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~- 370 (508)
.++++|..++.++++++++.++++.|.+++.+.+||+| .|+++|++ |.+|+...... ...+.+.+.
T Consensus 89 ~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIV--t~rDl~~~~~~----------~~~V~~vMtp 155 (490)
T 4avf_A 89 KHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIV--TGRDLRVKPNA----------GDTVAAIMTP 155 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEE--EhHHhhhcccc----------CCcHHHHhcc
Confidence 46788889999999999999999999999999999999 89999999 99999632211 112333333
Q ss_pred --CceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHH
Q 010540 371 --ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEEL 427 (508)
Q Consensus 371 --~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleei 427 (508)
.+.+++++.++.+.++.|+.+..+...+++ |+|+++|+||.+||++..
T Consensus 156 ~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---------e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 156 KDKLVTAREGTPLEEMKAKLYENRIEKMLVVD---------ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred CCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc---------CCCcEEEEEehHHhhhhc
Confidence 578999999999999999988766654545 899999999999999875
No 74
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.41 E-value=4.9e-07 Score=69.35 Aligned_cols=63 Identities=13% Similarity=0.223 Sum_probs=53.7
Q ss_pred eEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCC-----Cccccccccccccee
Q 010540 238 TFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVSIRRIPR 303 (508)
Q Consensus 238 vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~-----~~~~V~dim~~~v~~ 303 (508)
++++++++++. ++++.|.+++++.+||+++ ++++|+++.+|++++... ...+++++|.+++.+
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 56899999999 9999999999999999986 799999999999986432 246799998877654
No 75
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.39 E-value=4.8e-08 Score=92.67 Aligned_cols=103 Identities=12% Similarity=0.180 Sum_probs=53.1
Q ss_pred ccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccce-e
Q 010540 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP-R 303 (508)
Q Consensus 225 ~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~-~ 303 (508)
+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++...... ..+.+.+.+-.+ .
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 3469999997 778899999999 99999999999999999875 7999999999998754221 112333322111 1
Q ss_pred ecCCCCHHHHHHHHHhCCCeEEEEEecCC
Q 010540 304 VPSDMPLYDILNEFQKGSSHMAAVVKAKG 332 (508)
Q Consensus 304 V~~~~~l~d~L~~m~~~~~~~a~VvDe~g 332 (508)
.....++.++.+.|.+++.+.++|++..|
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp -----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 13444599999999999999999887543
No 76
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.34 E-value=6.6e-08 Score=103.48 Aligned_cols=119 Identities=15% Similarity=0.152 Sum_probs=6.8
Q ss_pred ccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccccCCc
Q 010540 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTES 372 (508)
Q Consensus 293 V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~~~ 372 (508)
++++|.++++++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+..... ...+..+++.....+
T Consensus 97 ~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGiv--t~~Dl~~~~~-------~~~~v~~im~~~~~~ 167 (494)
T 1vrd_A 97 TENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLL--TNRDVRFEKN-------LSKKIKDLMTPREKL 167 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEE--EHHHHHhhcC-------CCCcHHHHhCCCCCC
Confidence 6788999999999999999999999999999999999999999999 9999985211 111111222111257
Q ss_pred eeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 373 VVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 373 ~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
..++++.++.+..+.|..+..+...++ | ++|+++|+||..|+++.+..
T Consensus 168 ~~v~~~~~l~ea~~~m~~~~~~~lpVV-----d----~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 168 IVAPPDISLEKAKEILHQHRIEKLPLV-----S----KDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp --------------------------------------------------CHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCcEEEEE-----c----CCCeEEEEEEHHHHHhhhcc
Confidence 889999999999999887754443333 4 78999999999999999876
No 77
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.30 E-value=2.7e-08 Score=89.34 Aligned_cols=117 Identities=14% Similarity=0.096 Sum_probs=95.8
Q ss_pred cccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEecCC-CccccCCCCCCCccccccccCCCCCCcccccccc
Q 010540 290 ETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKG-KSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQ 366 (508)
Q Consensus 290 ~~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g-~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~ 366 (508)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+.+ +++|++ |.+|++...... +...+.
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~dl~~~~~~~--------~~~~v~ 106 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGIL--HAKDLLKYMFNP--------EQFHLK 106 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEE--EGGGGGGGSSCG--------GGCCHH
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEE--EHHHHHHHHHcC--------CcccHH
Confidence 3569999975 788999999999999999999999999999885 899999 999999776432 111233
Q ss_pred cccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHH
Q 010540 367 DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFE 425 (508)
Q Consensus 367 ~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIle 425 (508)
+.++++++++++.++.+..+.|..+..+...+++ ++|+++||||.+||+|
T Consensus 107 ~im~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---------~~g~~~Givt~~Dile 156 (156)
T 3oi8_A 107 SILRPAVFVPEGKSLTALLKEFREQRNHMAIVID---------EYGGTSGLVTFEDIIE 156 (156)
T ss_dssp HHCBCCCEEETTSBHHHHHHHHHHTTCCEEEEEC---------TTSSEEEEEEHHHHCC
T ss_pred HHcCCCEEECCCCCHHHHHHHHHhcCCeEEEEEC---------CCCCEEEEEEHHHhcC
Confidence 3445688999999999999999988665544444 7899999999999974
No 78
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.29 E-value=3.5e-07 Score=83.12 Aligned_cols=128 Identities=17% Similarity=0.148 Sum_probs=98.5
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCC-------CCCccc-
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGD-------CDLTAP- 361 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~-------~~l~~p- 361 (508)
+.+|+++|.+++++|++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++........ .....+
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGii--t~~Dll~~~~~~~~~~~~~~~~~~~~~~~ 94 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGII--TESDFLRGSIPFWIYEASEILSRAIPAPE 94 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEE--EGGGGGGGTCCTTHHHHHHHHTTTSCHHH
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEE--EHHHHHHHHhhccccchhhhhhhccchhh
Confidence 3579999999999999999999999999999999999999999999999 999998765422210 000000
Q ss_pred ---------ccccc-cccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 362 ---------LLSKQ-DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 362 ---------~~~i~-~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
...+. -+...++.++++.++.+..+.|..+..+. ++|- ++|+++||||..||++.++.
T Consensus 95 ~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~------lpVv----d~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 95 VEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHR------IPVV----QDGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSE------EEEE----ETTEEEEEEEHHHHTTTSCC
T ss_pred HHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcE------EEEE----ECCEEEEEEEHHHHHHHHHh
Confidence 00111 22456788999999999999998875443 3332 36999999999999999987
No 79
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.29 E-value=4.1e-07 Score=79.50 Aligned_cols=93 Identities=8% Similarity=-0.021 Sum_probs=75.4
Q ss_pred cccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecC-CCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 291 ~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
.+++++|. +++.++++++++.++++.|.+++.+.+||+|+. |+++|++ |.+|++..+..... +...+.+
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGiv--t~~dl~~~~~~~~~------~~~~v~~ 74 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVL--LAKDLLPLILKADG------DSDDVKK 74 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEE--EGGGGGGGGGSSSG------GGCCGGG
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEE--EHHHHHHHHHhccC------CCcCHHH
Confidence 45889998 678999999999999999999999999999987 8999999 99999987652111 1112334
Q ss_pred ccCCceeecCCCCCccchhhhhcc
Q 010540 368 EKTESVVVDVDRPLSSGSMNRLSS 391 (508)
Q Consensus 368 ~~~~~~~V~~~~~l~~~~~~~~~~ 391 (508)
.++++.+++++.++.+....|..+
T Consensus 75 ~m~~~~~v~~~~~l~~~~~~m~~~ 98 (136)
T 3lfr_A 75 LLRPATFVPESKRLNVLLREFRAN 98 (136)
T ss_dssp TCBCCCEEETTCBHHHHHHHHHHH
T ss_pred HcCCCeEECCCCcHHHHHHHHHhc
Confidence 445688999999999999888876
No 80
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.27 E-value=7.1e-07 Score=77.11 Aligned_cols=123 Identities=16% Similarity=0.190 Sum_probs=100.2
Q ss_pred ccccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecC-CCccccCCCCCCCccccccccCCCCCCcccccccc
Q 010540 290 ETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQ 366 (508)
Q Consensus 290 ~~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~ 366 (508)
+.+++++|. ++++++++++++.++++.|.+++.+.+||+|+. |+++|++ |.+|+++..... ...+.
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Giv--t~~dl~~~~~~~---------~~~v~ 72 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGIL--LAKDLLRYMLEP---------ALDIR 72 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEE--EGGGGGGGGTCT---------TSCGG
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEE--EHHHHHhHhccC---------CcCHH
Confidence 356899998 678899999999999999999999999999986 8999999 999999776421 11233
Q ss_pred cccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccC
Q 010540 367 DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIV 433 (508)
Q Consensus 367 ~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~ 433 (508)
+.++.+++++++.++.+..+.|..+..+...+++ ++|+++|+||.+||+++++| ||+
T Consensus 73 ~~m~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd---------~~g~~~Giit~~Dil~~l~g-ei~ 129 (129)
T 3jtf_A 73 SLVRPAVFIPEVKRLNVLLREFRASRNHLAIVID---------EHGGISGLVTMEDVLEQIVG-DIE 129 (129)
T ss_dssp GGCBCCCEEETTCBHHHHHHHHHTSSCCEEEEEC---------C-CCEEEEEEHHHHHHHHHH-TC-
T ss_pred HHhCCCeEeCCCCcHHHHHHHHHhcCCeEEEEEe---------CCCCEEEEEEHHHHHHHHhC-CCC
Confidence 3345688999999999999999987655444444 78999999999999999999 763
No 81
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.25 E-value=5.3e-07 Score=77.61 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=97.3
Q ss_pred ccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEecC-CCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 291 ~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+. |+++|++ |.+|+++.+...... ..+.+
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGiv--t~~dl~~~~~~~~~~-------~~v~~ 73 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGIL--MAKDLLPFMRSDAEA-------FSMDK 73 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEE--EGGGGGGGGSTTCCC-------CCHHH
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEE--EHHHHHHHHhccCCC-------CCHHH
Confidence 458899984 48999999999999999999999999999988 8999999 999999876533211 12333
Q ss_pred ccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 368 EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 368 ~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.++.+.+++++.++.+..+.|..+..+...+++ ++|+++|+||.+|++++++|
T Consensus 74 ~m~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---------~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 74 VLRTAVVVPESKRVDRMLKEFRSQRYHMAIVID---------EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp HCBCCCEEETTCBHHHHHHHHHHTTCCEEEEEC---------TTSCEEEEEEHHHHHHHC--
T ss_pred HcCCCeEECCCCcHHHHHHHHHhcCCeEEEEEe---------CCCCEEEEEEHHHHHHHHhC
Confidence 345678999999999999999887655443433 78999999999999999998
No 82
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.22 E-value=3.5e-07 Score=80.90 Aligned_cols=123 Identities=11% Similarity=0.116 Sum_probs=101.8
Q ss_pred ccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEecC-CCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 291 ~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+. |+++|++ |.+|++....... . . .+.+
T Consensus 23 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~dl~~~~~~~~-~----~---~v~~ 92 (148)
T 3lv9_A 23 KKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFV--HIRDLYNQKINEN-K----I---ELEE 92 (148)
T ss_dssp CBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEE--EHHHHHHHHHHHS-C----C---CGGG
T ss_pred CCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEE--EHHHHHHHHhcCC-C----c---cHHH
Confidence 569999987 89999999999999999999999999999988 8999999 9999997664332 1 1 2233
Q ss_pred ccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccC
Q 010540 368 EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIV 433 (508)
Q Consensus 368 ~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~ 433 (508)
.+..+.+++++.++.+..+.|..+..+...+++ ++|+++|+||.+||+++++| ||.
T Consensus 93 ~m~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---------~~g~~~Giit~~dil~~l~~-~i~ 148 (148)
T 3lv9_A 93 ILRDIIYISENLTIDKALERIRKEKLQLAIVVD---------EYGGTSGVVTIEDILEEIVG-EIQ 148 (148)
T ss_dssp TCBCCEEEETTSBHHHHHHHHHHHTCSEEEEEC---------TTSSEEEEEEHHHHHHHHHH-TC-
T ss_pred hcCCCeEECCCCCHHHHHHHHHhcCCeEEEEEe---------CCCCEEEEEEHHHHHHHHhC-cCC
Confidence 346688999999999999999987655544434 78999999999999999998 763
No 83
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.12 E-value=3.3e-07 Score=98.53 Aligned_cols=121 Identities=17% Similarity=0.061 Sum_probs=64.3
Q ss_pred cccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEec---CCCccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA---KGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 292 ~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe---~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
.++++|.++++++++++++.++++.|.+++.+.+||+|+ .|+++|++ |.+|+..... .....|..+++..
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiV--t~~Dl~~~~~-----~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIV--TSRDIDFLAE-----KDHTTLLSEVMTP 181 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEE--CTTTTC---------------------C
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEE--EHHHHHhhhh-----ccCCCCHHHHhCC
Confidence 477889889999999999999999999999999999998 58999999 9999975321 0011111122211
Q ss_pred cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHh
Q 010540 369 KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (508)
Q Consensus 369 ~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeiv 428 (508)
......++++.++.+..+.|..+..+...+++ ++|+++|+||..|+++.+.
T Consensus 182 ~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd---------~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 182 RIELVVAPAGVTLKEANEILQRSKKGKLPIVN---------DCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp CBCCCCEETTCCSTTTTTHHHHHTCSCCCEES---------SSSCCC----CCCCSSCCC
T ss_pred CCCCeEECCCCCHHHHHHHHHHcCCCcccEEC---------CCCeEEEEEEHHHHHHHhh
Confidence 12578899999999999999887654433333 7899999999999987754
No 84
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.07 E-value=2.5e-06 Score=73.36 Aligned_cols=121 Identities=10% Similarity=0.019 Sum_probs=96.6
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccc-
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE- 368 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~- 368 (508)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|+ |+++|++ |.+|+++......... . .+.+.
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Giv--t~~dl~~~~~~~~~~~---~---~v~~~m 74 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMV--HLSRLLEGRKGWPTVK---E---KLGEEL 74 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEE--EHHHHHTTCSSSCCTT---C---BCCGGG
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEE--EHHHHHHHHhhCCccc---C---cHHHHc
Confidence 46799999999999999999999999999999999999999 9999999 9999987665432211 1 12222
Q ss_pred cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHh
Q 010540 369 KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (508)
Q Consensus 369 ~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeiv 428 (508)
......++++.++.+....|..+..+...++ + ++|+++|+||..|+++.+.
T Consensus 75 ~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVv-----d----~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 75 LETVRSYRPGEQLFDNLISVAAAKCSVVPLA-----D----EDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCCCCBCTTSBGGGSHHHHHHCSSSEEEEE-----C----TTCBEEEEEEHHHHHHHHH
T ss_pred cCCCcEECCCCCHHHHHHHHHhCCCcEEEEE-----C----CCCCEEEEEEHHHHHHHHH
Confidence 2456789999999999999987754322222 4 7899999999999999875
No 85
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.04 E-value=8.5e-07 Score=76.65 Aligned_cols=121 Identities=20% Similarity=0.232 Sum_probs=98.3
Q ss_pred cccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecC-CCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 291 ~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
.+++++|. .++.++++++++.++++.|.+++.+.+||+|+. |+++|++ |.+|++......... ..+.+
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Giv--t~~dl~~~~~~~~~~-------~~v~~ 76 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFV--HRLELFKMQQSGSGQ-------KQLGA 76 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEEC--CHHHHHHHHHTTTTT-------SBHHH
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEE--EHHHHHHHHhcCCCc-------CCHHH
Confidence 56899998 456689999999999999999999999999987 8999999 999999776543221 12233
Q ss_pred ccCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 368 EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 368 ~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.++.+.+++++.++.+..+.|..+..+...+++ ++|+++|+||.+||+++++|
T Consensus 77 ~m~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---------~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 77 VMRPIQVVLNNTALPKVFDQMMTHRLQLALVVD---------EYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp HSEECCEEETTSCHHHHHHHHHHHTCCEEEEEC---------TTSCEEEEEEHHHHHHHHHT
T ss_pred HhcCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc---------CCCCEEEEEEHHHHHHHHcC
Confidence 334578999999999999999987655444444 78999999999999999998
No 86
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=97.98 E-value=1.8e-05 Score=61.42 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=27.6
Q ss_pred ceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 301 v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
+++|.+++++.++++.|.+++.+.+||+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 57899999999999999999999999998
No 87
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.98 E-value=1.3e-06 Score=78.52 Aligned_cols=132 Identities=11% Similarity=0.017 Sum_probs=94.9
Q ss_pred ccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccc-c
Q 010540 292 PVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD-E 368 (508)
Q Consensus 292 ~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~-~ 368 (508)
.++++|+ .++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|++..+.......... ....+.+ +
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGii--t~~Di~~~~~~~~~~~~~~-~~~~v~~im 92 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTI--GLRDIMAYQMEHDLSQEIM-ADTDIVHMT 92 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEE--EHHHHHHHHHHHTCCHHHH-TTSBGGGTC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEE--Eecchhhhhhhcccccccc-cccCHHHhh
Confidence 4788887 5789999999999999999999999999999999999999 9999987665433221000 0011222 2
Q ss_pred cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC--CccCCCCc
Q 010540 369 KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ--EEIVDETD 437 (508)
Q Consensus 369 ~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg--~eI~dE~d 437 (508)
...+.+++++.++.+..+.|..+. + ..+|| |+|+++||||.+||++++.+ .|+.||+|
T Consensus 93 ~~~~~~v~~~~~l~~~~~~m~~~~------~-lpVVd----~~g~l~GiiT~~Dil~~~~~~~~~~~~e~~ 152 (156)
T 3k6e_A 93 KTDVAVVSPDFTITEVLHKLVDES------F-LPVVD----AEGIFQGIITRKSILKAVNALLHDFSKEYE 152 (156)
T ss_dssp BCSCCCBCTTCCHHHHHHHTTTSS------E-EEEEC----TTSBEEEEEEHHHHHHHHHHHSCC------
T ss_pred cCCceecccccHHHHHHHHHHHcC------C-eEEEe----cCCEEEEEEEHHHHHHHHHHHhcccchhhe
Confidence 455778999999999999887542 1 22346 89999999999999999943 15555544
No 88
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.96 E-value=1.3e-06 Score=75.63 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=99.0
Q ss_pred ccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEec-CCCccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 292 PVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA-KGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 292 ~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe-~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
+++++|. +++.++++++++.++++.|.+++.+.+||+|+ .|+++|++ |.+|+++......... ...+.+.
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGiv--t~~dl~~~~~~~~~~~-----~~~v~~~ 75 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISML--RVREAYRLMTEKKEFT-----KEIMLRA 75 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEE--EHHHHHHHHTSSSCCC-----HHHHHHH
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEE--EHHHHHHHHhccCccc-----hhhHHHh
Confidence 5788886 46889999999999999999999999999975 68999999 9999997765432111 1123334
Q ss_pred cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCcc
Q 010540 369 KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEI 432 (508)
Q Consensus 369 ~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI 432 (508)
++.+.+++++.++.+..+.|..+..+...+++ |+|+++||||.+|++++++| ||
T Consensus 76 m~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---------~~g~lvGiit~~Dil~~l~g-~i 129 (130)
T 3hf7_A 76 ADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD---------EYGDIQGLVTVEDILEEIVG-DF 129 (130)
T ss_dssp SBCCCEEETTCBHHHHHHHHHHHCCCEEEEEC---------TTSCEEEEEEHHHHHHHHHC---
T ss_pred ccCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc---------CCCCEEEEeeHHHHHHHHhC-CC
Confidence 46788999999999999999987655444444 78999999999999999999 76
No 89
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.95 E-value=2e-05 Score=70.41 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=34.6
Q ss_pred ccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.+|+++|.+ ++++++++++.++++.|.+++.+.+||+|
T Consensus 17 ~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd 54 (159)
T 3fv6_A 17 LQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVD 54 (159)
T ss_dssp CBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEc
Confidence 569999876 45999999999999999999999999999
No 90
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.95 E-value=2e-05 Score=69.60 Aligned_cols=39 Identities=26% Similarity=0.303 Sum_probs=36.6
Q ss_pred ccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 291 ~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd 68 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD 68 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 369999988 899999999999999999999999999999
No 91
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.95 E-value=5.7e-06 Score=71.81 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=99.8
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccccc
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK 369 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~ 369 (508)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++......... .. .+.+.+
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~~~~~~~~~~~--~~---~v~~~m 78 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFF--TKSDIIRRVIVPGLPY--DI---PVERIM 78 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHHHHTTTTCCCT--TS---BGGGTC
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE--eHHHHHHHHHhcCCcc--cC---CHHHHh
Confidence 3568999999999999999999999999999999999999999999999 9999974332111110 11 222232
Q ss_pred -CCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccCCC
Q 010540 370 -TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDE 435 (508)
Q Consensus 370 -~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~dE 435 (508)
..+.+++++.++.+....|..+..+.. +++ ++|+++|+||..||++.+.+ ++..+
T Consensus 79 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd---------~~g~~~Giit~~dil~~~~~-~~~~~ 134 (138)
T 2yzi_A 79 TRNLITANVNTPLGEVLRKMAEHRIKHI-LIE---------EEGKIVGIFTLSDLLEASRR-RLETA 134 (138)
T ss_dssp BCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE---------ETTEEEEEEEHHHHHHHHHC-CSCCC
T ss_pred hCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC---------CCCCEEEEEEHHHHHHHHHH-HHHhh
Confidence 457899999999999999987754433 444 68999999999999999987 66544
No 92
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.94 E-value=3.1e-06 Score=77.41 Aligned_cols=91 Identities=9% Similarity=0.050 Sum_probs=74.7
Q ss_pred ccccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecC-CCccccCCCCCCCccccccccCCCCCCcccccccc
Q 010540 290 ETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQ 366 (508)
Q Consensus 290 ~~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~-g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~ 366 (508)
..+|+++|. ++++++++++++.++++.|.+++.+.+||+|+. |+++|++ |.+|++........ ..+.
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~Dl~~~~~~~~~--------~~v~ 104 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIG--RAKDLVADLITEGR--------VRRN 104 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEE--EHHHHHHHHHHHSS--------CCGG
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEE--EHHHHHHHHhcCCc--------chhH
Confidence 457999996 468899999999999999999999999999987 8999999 99999976643211 1223
Q ss_pred cccCCceeecCCCCCccchhhhhcc
Q 010540 367 DEKTESVVVDVDRPLSSGSMNRLSS 391 (508)
Q Consensus 367 ~~~~~~~~V~~~~~l~~~~~~~~~~ 391 (508)
..+.+.+++++.++.+.+..|..+
T Consensus 105 -~~~~~~~v~~~~~l~~al~~m~~~ 128 (173)
T 3ocm_A 105 -RLRDPIIVHESIGILRLMDTLKRS 128 (173)
T ss_dssp -GSBCCCEECGGGCHHHHHHHHHHS
T ss_pred -hcCCCeEECCCCcHHHHHHHHHHc
Confidence 456678999999999998888876
No 93
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.93 E-value=7.7e-06 Score=72.78 Aligned_cols=60 Identities=22% Similarity=0.306 Sum_probs=53.8
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~ 287 (508)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+++.+|++.+..
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVI 134 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 357899999997 788899999999 999999999999999998 4 89999999999997643
No 94
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.91 E-value=3.3e-06 Score=74.50 Aligned_cols=127 Identities=13% Similarity=0.048 Sum_probs=97.7
Q ss_pred cccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 291 ~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
.+++++|. +++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++.+........-......+.+.
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Giv--t~~dl~~~~~~~~~~~~~~~~~~~v~~~ 92 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLI--STAMILDGILGLERIEFERLEEMKVEQV 92 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--EHHHHHHHTBCSSSBCGGGGGGCBGGGT
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEE--EHHHHHHHHHhhcccchhHHhcCCHHHH
Confidence 46899998 5689999999999999999999999999999999999999 9999997775332211000011123333
Q ss_pred c-CCceeecCCCCCccchhhhhcccCCCCcccccccc-cccccCCCceEEeechHHHHHHHhCCcc
Q 010540 369 K-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEELLQEEI 432 (508)
Q Consensus 369 ~-~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIVTleDIleeivg~eI 432 (508)
+ ..+.+++++.++.+....|..+.. ++| + ++|+++|+||..||++.+.+ ++
T Consensus 93 m~~~~~~v~~~~~l~~a~~~~~~~~~--------l~Vvd----~~g~~~Giit~~dil~~l~~-~~ 145 (150)
T 3lqn_A 93 MKQDIPVLKLEDSFAKALEMTIDHPF--------ICAVN----EDGYFEGILTRRAILKLLNK-KV 145 (150)
T ss_dssp CBSSCCEEETTCBHHHHHHHHHHCSE--------EEEEC----TTCBEEEEEEHHHHHHHHHH-HC
T ss_pred hcCCCceeCCCCCHHHHHHHHHhCCE--------EEEEC----CCCcEEEEEEHHHHHHHHHH-Hh
Confidence 2 456899999999999998876632 333 5 68999999999999999875 54
No 95
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=97.90 E-value=1.6e-05 Score=67.31 Aligned_cols=59 Identities=22% Similarity=0.314 Sum_probs=52.3
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
...+++++|.+ ++.++++++++. ++++.|.+++.+++||++++ ++++|+++.+|++.+.
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLF 118 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHh
Confidence 34489999987 778899999998 99999999999999999875 8999999999998654
No 96
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.87 E-value=2.7e-06 Score=75.71 Aligned_cols=128 Identities=12% Similarity=0.000 Sum_probs=96.9
Q ss_pred cccccccc--ccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 291 ~~V~dim~--~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++.+......... .....+.+.
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~~~~-~~~~~v~~~ 91 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTI--GLRDIMAYQMEHDLSQEI-MADTDIVHM 91 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEE--EHHHHHHHHHHHTCCHHH-HTTSBGGGG
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEE--cHHHHHHHHHhccccccc-cccCcHHHh
Confidence 46899998 7899999999999999999999999999999999999999 999999776542221000 000112222
Q ss_pred -cCCceeecCCCCCccchhhhhcccCCCCcccccccc-cccccCCCceEEeechHHHHHHHhCCccCC
Q 010540 369 -KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEELLQEEIVD 434 (508)
Q Consensus 369 -~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIVTleDIleeivg~eI~d 434 (508)
...++.++++.++.+....|..+. .++| + ++|+++|+||..||++.+.+ .+.+
T Consensus 92 m~~~~~~v~~~~~l~~a~~~~~~~~--------~lpVvd----~~g~~~Giit~~dil~~l~~-~~~~ 146 (156)
T 3ctu_A 92 TKTDVAVVSPDFTITEVLHKLVDES--------FLPVVD----AEGIFQGIITRKSILKAVNA-LLHD 146 (156)
T ss_dssp CBCSCCCBCSSCCHHHHHHHTTTSS--------EEEEEC----TTSBEEEEEETTHHHHHHHH-HSCC
T ss_pred ccCCceeeCCCCcHHHHHHHHHHcC--------eEEEEc----CCCeEEEEEEHHHHHHHHHH-HHHh
Confidence 245678999999999998888762 1333 5 68999999999999999875 5443
No 97
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.86 E-value=3.9e-05 Score=58.46 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=27.9
Q ss_pred cceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 300 ~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 356899999999999999999999999999
No 98
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.85 E-value=6.6e-06 Score=71.85 Aligned_cols=121 Identities=13% Similarity=0.188 Sum_probs=96.0
Q ss_pred ccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCC--CccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKG--KSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g--~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+.| +++|++ |.+|+++.+....... . .+.+.
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Giv--t~~dl~~~~~~~~~~~---~---~v~~~ 76 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVV--SERDILRAVAQRLDLD---G---PAMPI 76 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEE--EHHHHHHHHHTTCCTT---S---BSGGG
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEE--EHHHHHHHHhcCCCCC---C---CHHHH
Confidence 458899999999999999999999999999999999999988 999999 9999987654332111 1 22233
Q ss_pred -cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 369 -KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 369 -~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.....+++++ ++.+..+.|..+..+...++ + ++|+++|+||.+||++++.+
T Consensus 77 m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vv-----d----~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 77 ANSPITVLDTD-PVHVAAEKMRRHNIRHVVVV-----N----KNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp CBCCCEEETTS-BHHHHHHHHHHHTCSEEEEE-----C----TTSCEEEEEEHHHHHSCHHH
T ss_pred cCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEE-----c----CCCcEEEEEEHHHHHHHHHH
Confidence 3467899999 99999999988754443233 4 68999999999999987764
No 99
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.84 E-value=6e-06 Score=71.56 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=95.7
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCc-cccccccCCCCCCcccccccccc
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKK-PKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDl-l~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|+.|+++|++ +.+|+ +..+....... ..+.+.
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~~~~~~~~~~~~------~~v~~~ 78 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIV--TTTDIGYNLIRDKYTLE------TTIGDV 78 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEE--EHHHHHHHHTTTCCCSS------CBHHHH
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEE--EHHHHHHHHHhhcccCC------cCHHHH
Confidence 3568999988999999999999999999999999999999999999999 99999 76554322111 122222
Q ss_pred -cCCceeecCCCCCccchhhhhcccCCCCcccccccc-cccccCCCceEEeechHHHHHHHhC
Q 010540 369 -KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 369 -~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.....+++++.++.+..+.|..+.... ..+..++| + ++|+++|+||..|+++.+.+
T Consensus 79 m~~~~~~v~~~~~l~~~~~~~~~~~~~~-~~~~~l~Vvd----~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 79 MTKDVITIHEDASILEAIKKMDISGKKE-EIINQLPVVD----KNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp SCSSCCCEETTSBHHHHHHHHTCC------CCCEEEEEC----TTSBEEEEEEHHHHHHHHHH
T ss_pred hCCCcEEECCCCCHHHHHHHHHhcCCcc-ccccEEEEEC----CCCeEEEEEEHHHHHHHHHh
Confidence 245678999999999999988775110 11223333 4 68999999999999998864
No 100
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.82 E-value=7.2e-06 Score=70.66 Aligned_cols=121 Identities=16% Similarity=0.142 Sum_probs=95.8
Q ss_pred ccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccccc-
Q 010540 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK- 369 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~- 369 (508)
.+++++|.+++.++++++++.++++.|.+++.+.+||+| .|+++|++ |.+|++..+....... . .+.+.+
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Giv--t~~dl~~~~~~~~~~~---~---~v~~~~~ 74 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGII--TERDIVKAIGKGKSLE---T---KAEEFMT 74 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEE--EHHHHHHHHHTTCCTT---C---BGGGTSE
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEE--cHHHHHHHHhcCCCcc---c---CHHHHcC
Confidence 468999988999999999999999999999999999999 88999999 9999987655432211 1 122222
Q ss_pred CCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 370 TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 370 ~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
....+++++.++.+..+.|..+..+...++ + ++|+++|+||..|+++.+..
T Consensus 75 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv-----d----~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 75 ASLITIREDSPITGALALMRQFNIRHLPVV-----D----DKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp ECCCCEETTSBHHHHHHHHHHHTCSEEEEE-----C----TTSCEEEEEEHHHHHHHHHH
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEE-----C----CCCeEEEEEEHHHHHHHHHH
Confidence 356789999999999999987754432222 4 68999999999999998875
No 101
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.79 E-value=1.2e-05 Score=71.35 Aligned_cols=129 Identities=14% Similarity=0.058 Sum_probs=98.1
Q ss_pred cccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 290 ETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 290 ~~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|++...........-......+.+
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Giv--t~~dl~~~~~~~~~~~~~~~~~~~v~~ 87 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLI--SMTMMMDAILGLERIEFERLETMKVEE 87 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEE--EHHHHHHHSBCSSSBCGGGGGTCBGGG
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEe--eHHHHHHHHhcccccchHHhcCCcHHH
Confidence 3568999886 889999999999999999999999999999999999999 999998766532111000000112222
Q ss_pred c-cCCceeecCCCCCccchhhhhcccCCCCcccccccc-cccccCCCceEEeechHHHHHHHhCCccC
Q 010540 368 E-KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEELLQEEIV 433 (508)
Q Consensus 368 ~-~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIVTleDIleeivg~eI~ 433 (508)
. ...+.+++++.++.+..+.|..+.. ++| + ++|+++|+||..||++.+.+ ...
T Consensus 88 ~m~~~~~~v~~~~~l~~a~~~m~~~~~--------l~Vvd----~~g~~~Giit~~dil~~~~~-~~~ 142 (157)
T 2emq_A 88 VMNRNIPRLRLDDSLMKAVGLIVNHPF--------VCVEN----DDGYFAGIFTRREVLKQLNK-QLH 142 (157)
T ss_dssp TCBCCCCEEETTSBHHHHHHHHHHSSE--------EEEEC----SSSSEEEEEEHHHHHHHHHH-TTC
T ss_pred HhCCCCceecCCCcHHHHHHHHhhCCE--------EEEEc----CCCeEEEEEEHHHHHHHHHH-Hhh
Confidence 2 3456799999999999999987732 333 5 67999999999999999986 544
No 102
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.75 E-value=2.6e-05 Score=66.10 Aligned_cols=59 Identities=22% Similarity=0.304 Sum_probs=53.2
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+++.+|++.+.
T Consensus 62 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 62 LAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp TTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 457889999997 778899999999 9999999999999999986 7999999999998653
No 103
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.75 E-value=3.5e-05 Score=66.47 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=53.1
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||++ + ++++|+++.+|++.+.
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 457899999997 778899999998 999999999999999998 4 7999999999998653
No 104
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.75 E-value=5.6e-05 Score=69.22 Aligned_cols=60 Identities=12% Similarity=0.169 Sum_probs=53.7
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
..+.+++++|.+ ++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|++.+.
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTS
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 456789999997 778899999999 99999999999999999875 7899999999999653
No 105
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.74 E-value=3.3e-05 Score=69.10 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=36.6
Q ss_pred ccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.+|+++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd 43 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD 43 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 468999989999999999999999999999999999999
No 106
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.73 E-value=2.1e-05 Score=68.89 Aligned_cols=60 Identities=18% Similarity=0.396 Sum_probs=52.6
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++..
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHH
Confidence 356789999998 677899999999 99999999999999999865 8999999999999753
No 107
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.73 E-value=5.2e-06 Score=87.79 Aligned_cols=134 Identities=15% Similarity=0.083 Sum_probs=10.6
Q ss_pred ccccccceeecCCCCHHHHHHHHHhCCCeEEEEEec---CCCccccCCCCCCCccccccccCCCCCCcccccccccccCC
Q 010540 295 AVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA---KGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTE 371 (508)
Q Consensus 295 dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe---~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~~ 371 (508)
..|..+++++.++.++.|++++|.+++..-+||+|+ .|+++||+ |.+|+-.+ +..+|..+++. .+
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIv--T~RD~rf~--------d~~~~V~evMT--~~ 209 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIV--TGRDVQFQ--------DAETPIKSVMT--TE 209 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEE--eccccccc--------ccceEhhhhcc--cc
Confidence 446788899999999999999999999999999986 67899999 99997431 11122222222 34
Q ss_pred ceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCccCCCCccccccceeEEeccc
Q 010540 372 SVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDEYVDVHKRIRVAAA 451 (508)
Q Consensus 372 ~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI~dE~d~~~~~~~~~~v~~~ 451 (508)
.+.+++...+.+.++.+++++..-..++ | ++|+++|+||..|+...- +.... ...|..++++|.++
T Consensus 210 lvt~~~~~~leeA~~iL~~~kieklpVV-----d----~~g~LvGlIT~kDi~k~~---~~p~A--~k~d~~grL~VgAA 275 (556)
T 4af0_A 210 VVTGSSPITLEKANSLLRETKKGKLPIV-----D----SNGHLVSLVARSDLLKNQ---NYPYA--SKVPESKQLYCGAA 275 (556)
T ss_dssp ------------------------------------------------------------CTTC--CBCTTTCCBCCEEE
T ss_pred eEEecCCCCHHHHHHHHHHccccceeEE-----c----cCCcEEEEEEechhhhhh---hCCcc--hhcchhhceeeEEE
Confidence 6778888888888888877654433333 4 789999999999997762 22211 11234457777777
Q ss_pred cCh
Q 010540 452 AAA 454 (508)
Q Consensus 452 ~~~ 454 (508)
+.+
T Consensus 276 Vgv 278 (556)
T 4af0_A 276 IGT 278 (556)
T ss_dssp ECS
T ss_pred ecc
Confidence 665
No 108
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.71 E-value=5.2e-05 Score=67.20 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=51.5
Q ss_pred ccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 225 ~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
+.+|+++| + ++.++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++.+.
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l 141 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEEL 141 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 67899999 4 778999999998 99999999999999999875 7999999999999653
No 109
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.69 E-value=1.6e-05 Score=74.75 Aligned_cols=117 Identities=12% Similarity=0.058 Sum_probs=96.5
Q ss_pred ccccccccccceeecCCCCHHHHHHHHHhC---CCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCccccccccc
Q 010540 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKG---SSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~~~l~d~L~~m~~~---~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~ 367 (508)
.+++++|.++++++++++++.++++.|+++ +.+.++|+|+.|+++|++ |.+|++... +...+.+
T Consensus 54 ~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGiv--t~~dll~~~-----------~~~~v~~ 120 (205)
T 3kxr_A 54 NEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTV--RRYDIFKHE-----------PHEPLIS 120 (205)
T ss_dssp TCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEE--EHHHHTTSC-----------TTSBGGG
T ss_pred chHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEE--EHHHHHhCC-----------CcchHHH
Confidence 458899999999999999999999999987 789999999999999999 999987531 1112333
Q ss_pred cc-CCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 368 EK-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 368 ~~-~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.+ ..+.+++++.++.+..+.|.....+...+++ ++|+++||||.+||++.+.+
T Consensus 121 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD---------~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 121 LLSEDSRALTANTTLLDAAEAIEHSREIELPVID---------DAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC---------TTSBEEEEEEHHHHHHHHHH
T ss_pred HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc---------CCCeEEEEEEHHHHHHHHHH
Confidence 33 4578999999999999999987655544444 78999999999999999875
No 110
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.69 E-value=5.3e-05 Score=68.06 Aligned_cols=60 Identities=20% Similarity=0.279 Sum_probs=54.1
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~ 287 (508)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++.+..
T Consensus 90 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 90 SLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred cccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 456789999996 788899999999 9999999999999999987 89999999999997654
No 111
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.66 E-value=3.8e-05 Score=66.04 Aligned_cols=59 Identities=22% Similarity=0.318 Sum_probs=53.0
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||+++ ++++|+++.+|+++..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 356789999987 778899999999 9999999999999999986 7999999999998754
No 112
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.66 E-value=1.1e-05 Score=71.96 Aligned_cols=130 Identities=14% Similarity=0.059 Sum_probs=96.7
Q ss_pred ccccccccc--cceeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 291 ~~V~dim~~--~v~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|++..+........-......+.+.
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGiv--t~~dl~~~~~~~~~~~~~~~~~~~v~~~ 91 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLI--GTNMIMNSIFGLERIEFEKLDQITVEEV 91 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEE--EHHHHHHHHBCSSSBCGGGTTTSBHHHH
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEe--EHHHHHHHhhhhcccchhhhccCCHHHh
Confidence 568899887 899999999999999999999999999999999999999 9999987665322110000001122222
Q ss_pred c-CCceeecCCCCCccchhhhhcccCCCCcccccccc-cccccCCCceEEeechHHHHHHHhCCccCCC
Q 010540 369 K-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEELLQEEIVDE 435 (508)
Q Consensus 369 ~-~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v-~~~~~E~G~lvGIVTleDIleeivg~eI~dE 435 (508)
+ .....++++.++.+....|..... ++| + ++|+++|+||..||++.+.+ ++.++
T Consensus 92 m~~~~~~v~~~~~l~~a~~~m~~~~~--------lpVvd----~~g~~vGiit~~dil~~~~~-~~~~~ 147 (159)
T 1yav_A 92 MLTDIPRLHINDPIMKGFGMVINNGF--------VCVEN----DEQVFEGIFTRRVVLKELNK-HIRSL 147 (159)
T ss_dssp SBCSCCEEETTSBHHHHHHHTTTCSE--------EEEEC----TTCBEEEEEEHHHHHHHHHH-HC---
T ss_pred cCCCCceEcCCCCHHHHHHHHHhCCE--------EEEEe----CCCeEEEEEEHHHHHHHHHH-HHHhh
Confidence 2 356789999999999888876622 333 5 68999999999999999886 66544
No 113
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.64 E-value=4.2e-05 Score=69.17 Aligned_cols=61 Identities=23% Similarity=0.395 Sum_probs=54.2
Q ss_pred cCcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 222 ~l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++++.
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4567889999997 678899999998 99999999999999999865 8999999999998653
No 114
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.61 E-value=7.8e-05 Score=72.43 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=37.7
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
...|+++|.+++++|.+++++.++.+.|.+++.+..||||
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd 51 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVD 51 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEES
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 3569999999999999999999999999999999999998
No 115
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.61 E-value=7.2e-05 Score=66.53 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=37.3
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd 51 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE 51 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe
Confidence 4568999999999999999999999999999999999998
No 116
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.55 E-value=0.00012 Score=63.49 Aligned_cols=39 Identities=10% Similarity=0.384 Sum_probs=35.2
Q ss_pred ccccc---cccccceeecCCCCHHHHHHHHHhCCCeEEEEEe
Q 010540 291 TPVSA---VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (508)
Q Consensus 291 ~~V~d---im~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD 329 (508)
.++++ +|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 49 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 49 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc
Confidence 45667 7778999999999999999999999999999999
No 117
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.53 E-value=8.3e-05 Score=65.73 Aligned_cols=59 Identities=14% Similarity=0.290 Sum_probs=51.6
Q ss_pred ccccccccccc----cceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhcc
Q 010540 225 EKTAEEAMTPI----ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (508)
Q Consensus 225 ~~~V~dIMtpr----~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~ 285 (508)
+.+++++|.++ .++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|++.+
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQA 148 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHH
Confidence 56799999743 3778999999999 99999999999999999875 799999999999865
No 118
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.53 E-value=3.2e-05 Score=82.76 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=23.2
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccc--
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRI-- 301 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v-- 301 (508)
.+.+|+++|+|..+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|+++...... ...+.+.+-.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999855699999999999 99999999999999999876 89999999999997654322 1222221111
Q ss_pred eeecCCCCHHHHHHHHHhCCCeEEEEEecCCCccc
Q 010540 302 PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKT 336 (508)
Q Consensus 302 ~~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~G 336 (508)
..++. ....+.++.|.+.+.+..+|....|...|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred cccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 23455 66677788888888887555333444444
No 119
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.50 E-value=0.00013 Score=64.79 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=36.8
Q ss_pred ccccccccccceeecCCCCHHHHHHHHHhCCCeE-EEEEe
Q 010540 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHM-AAVVK 329 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~-a~VvD 329 (508)
.+++++|.++++++++++++.++++.|.+++.+. +||+|
T Consensus 16 ~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd 55 (157)
T 1o50_A 16 KDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVAR 55 (157)
T ss_dssp HHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEE
T ss_pred ccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEE
Confidence 4689999999999999999999999999999999 99999
No 120
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.46 E-value=0.00022 Score=76.32 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=83.9
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccccccccce
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP 302 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~dim~~~v~ 302 (508)
-.+.+|+++|++ .++++++++.++. ++++.|.+++...+||+|++ ++++|+++.+|+++..... ..+.+.+.+-.+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999997 5788999999998 99999999999999999876 8999999999999764321 223343333322
Q ss_pred --eecCCCCHHHHHHHHHhCCCeEEEEEecCCCccccC
Q 010540 303 --RVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (508)
Q Consensus 303 --~V~~~~~l~d~L~~m~~~~~~~a~VvDe~g~i~Giv 338 (508)
.+.......+.++.+.+.+.+.+.+....|...|++
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~ 285 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVI 285 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHH
T ss_pred eeeeeeccchHHHHHHHHhhccceEEecccccchhhhh
Confidence 344455567777888888999887776655544444
No 121
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.46 E-value=3.7e-05 Score=84.58 Aligned_cols=128 Identities=16% Similarity=0.073 Sum_probs=97.6
Q ss_pred ccccccccc--ccceeecCCCCHHHHHHHHH-hCCCeEEEEEecCCCccccCCCCCCCccccccccCCCCC---------
Q 010540 290 ETPVSAVSI--RRIPRVPSDMPLYDILNEFQ-KGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCD--------- 357 (508)
Q Consensus 290 ~~~V~dim~--~~v~~V~~~~~l~d~L~~m~-~~~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~--------- 357 (508)
+.+|+|+|. +++.++++++++.|+++.|+ +++.+..||+|+.|+++|++ |.+|+++.+........
T Consensus 452 ~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiV--t~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 452 EMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAI--SRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEE--SHHHHTTTTTTC--------------
T ss_pred cCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEE--EHHHHHHHHHHHhhhcccccccccce
Confidence 467999999 89999999999999999999 79999999999999999999 99999976653311000
Q ss_pred --------------Cc-------------------cccccc-ccccCCceeecCCCCCccchhhhhcccCCCCccccccc
Q 010540 358 --------------LT-------------------APLLSK-QDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLI 403 (508)
Q Consensus 358 --------------l~-------------------~p~~~i-~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~ 403 (508)
+. .|...+ ..+.+.++.+++++++.+..+.|.++..+. ++
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~------lp 603 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSM------IY 603 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSE------EE
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCE------EE
Confidence 00 000001 124566789999999999999999987665 22
Q ss_pred ccccccCCCceEEeechHHHHHHHhC
Q 010540 404 YASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 404 v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
|. |+|+++||||.+||++++..
T Consensus 604 Vv----e~G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 604 VT----ERGKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp EE----ETTEEEEEEEGGGTEECCCC
T ss_pred EE----ECCEEEEEEehhhHHHHHhh
Confidence 22 48999999999999887653
No 122
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.38 E-value=5e-05 Score=81.71 Aligned_cols=125 Identities=10% Similarity=0.025 Sum_probs=97.6
Q ss_pred ccccccccccceeecCC-CCHHHHHHHHHhCCCeEEEEEe-cCCCccccCCCCCCCccccccccCCCCCCcccccccccc
Q 010540 291 TPVSAVSIRRIPRVPSD-MPLYDILNEFQKGSSHMAAVVK-AKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (508)
Q Consensus 291 ~~V~dim~~~v~~V~~~-~~l~d~L~~m~~~~~~~a~VvD-e~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~ 368 (508)
.+|+++|.+++++++++ +++.++++.|.+++.+.+||+| +.|+++|+| |.+|+++.+........ . .+.+.
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiV--t~~Dll~~l~~~~~~~~--~---~V~~i 456 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVV--GQETLITQIVSMNRQQS--D---PAIKA 456 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEE--EHHHHHHHHHHHCCCTT--S---BGGGG
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEE--EHHHHHHHHHhccCcCC--C---cHHHH
Confidence 57999999999999999 9999999999999999999999 889999999 99999977654322111 1 22232
Q ss_pred -cCCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhC
Q 010540 369 -KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (508)
Q Consensus 369 -~~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg 429 (508)
.....+++++.++.+..+.|..... ..|++.+.-.+|+++||||.+||++.+..
T Consensus 457 m~~~~~~v~~~~~l~~a~~~m~~~~~-------~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 457 LNKRVIRLNESEILGKLARVLEVDPS-------VLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp EETTCCEEETTSBHHHHHHHHTTCSE-------EEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred hcCCCeEECCCCcHHHHHHHHhhCCE-------EEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 3556799999999999998865421 24556111115999999999999999986
No 123
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.37 E-value=0.00018 Score=65.34 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=52.8
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++.+.
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd-~-g~~vGiit~~dll~~l 163 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH-N-GRLLGIITKKDVLKHI 163 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 456789999987 788999999999 999999999999999998 3 8999999999998653
No 124
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=97.29 E-value=6.8e-05 Score=63.78 Aligned_cols=56 Identities=11% Similarity=-0.080 Sum_probs=31.6
Q ss_pred ccCCCCccccccce-----eEEeccccChHHHhhcCCCC--CCcc-ccCccccCCcc--cCCCCCC
Q 010540 431 EIVDETDEYVDVHK-----RIRVAAAAAASSVARAPSSR--RLIG-QKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 431 eI~dE~d~~~~~~~-----~~~v~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~g~~--~~~~~~~ 486 (508)
||.||||.....+. +|+|+|.++++++|+.+|++ .+.+ +.+.-|+|||. .-|+.+.
T Consensus 17 ~I~DE~D~ee~~i~~~~dg~~~v~G~~~l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~iP~ 82 (113)
T 3ded_A 17 LYFQGHDGEEDEIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRVPS 82 (113)
T ss_dssp ----------CCEEECTTSCEEEETTCBHHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSSCC
T ss_pred cCcCCCCCCCCceEEecCCEEEEecccCHHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCCCC
Confidence 89999997544333 59999999999999999998 5431 23344569993 3355443
No 125
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.26 E-value=0.00024 Score=69.71 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=54.1
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~ 287 (508)
..+.+|+++|++ +++++++++++. ++++.|.+++.+.+||++++ ++++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 357889999986 788999999998 99999999999999999865 89999999999997643
No 126
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.12 E-value=0.00031 Score=69.37 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=53.6
Q ss_pred CcccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccC
Q 010540 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (508)
Q Consensus 223 l~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~ 286 (508)
..+.+|+++|++ +++++++++++. ++++.|.+++.+.+||++++ ++++|+|+..|++...
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVI 257 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 357789999987 788899999998 99999999999999999865 8999999999998653
No 127
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.11 E-value=0.00018 Score=76.34 Aligned_cols=120 Identities=18% Similarity=0.200 Sum_probs=98.6
Q ss_pred cccccccccccceeecCCCCHHHHHHHHHhC-----CCeEEEEEecCCCccccCCCCCCCccccccccCCCCCCcccccc
Q 010540 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKG-----SSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLS 364 (508)
Q Consensus 290 ~~~V~dim~~~v~~V~~~~~l~d~L~~m~~~-----~~~~a~VvDe~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~ 364 (508)
+.+++++|.++++++++++++.++++.|+++ +....||+|+.|+++|++ |.+|++... +...
T Consensus 154 ~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiV--t~~Dll~~~-----------~~~~ 220 (473)
T 2zy9_A 154 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVL--SLRDLIVAD-----------PRTR 220 (473)
T ss_dssp TTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEE--EHHHHHHSC-----------TTSB
T ss_pred CCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEE--EHHHHhcCC-----------CCCc
Confidence 4568999999999999999999999999875 578999999999999999 999998531 1112
Q ss_pred ccccc-CCceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHhCCcc
Q 010540 365 KQDEK-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEI 432 (508)
Q Consensus 365 i~~~~-~~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeivg~eI 432 (508)
+.+.+ +..+++++++++.+..+.|+++..+...+++ ++|+++|+||.+||++.+.+ +.
T Consensus 221 v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD---------e~g~lvGiIT~~Dil~~i~~-e~ 279 (473)
T 2zy9_A 221 VAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD---------EEGRLVGIVTVDDVLDVLEA-EA 279 (473)
T ss_dssp GGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC---------TTSBEEEEEEHHHHHHHHHH-HH
T ss_pred HHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc---------CCCEEEEEEehHhhHHHHHH-Hh
Confidence 33333 5678999999999999999988665544444 89999999999999999876 53
No 128
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=96.76 E-value=0.00038 Score=56.87 Aligned_cols=40 Identities=10% Similarity=0.055 Sum_probs=30.8
Q ss_pred eEEeccccChHHHhhcCCCCCCccccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIGQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|+++++++|+.+|++.+.++++| +|||. .-|+.+.
T Consensus 17 ~~~v~G~~~l~dl~~~l~~~l~~~~~~T--lgG~i~~~lg~iP~ 58 (93)
T 2r2z_A 17 EYLVQGRMLIDEFNEVFETDLHMSDVDT--MAGYLITALGTIPD 58 (93)
T ss_dssp EEEEETTSBHHHHHHHHTCCCCCTTCCB--HHHHHHHHHSSCCC
T ss_pred EEEEECCCCHHHHHHHhCCCCCCCCccc--HHHHHHHHhCCCCC
Confidence 6999999999999999999876655555 59993 3344443
No 129
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.53 E-value=0.0016 Score=69.28 Aligned_cols=105 Identities=18% Similarity=0.259 Sum_probs=21.3
Q ss_pred cccccccccccccceEEEeCCCCchHHHHHHHHHcCCcEEEEeeCCCCcEEEEeEHhHHhccCCCCcccccc----cccc
Q 010540 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSA----VSIR 299 (508)
Q Consensus 224 ~~~~V~dIMtpr~~vv~v~~~~tl~~eal~~~~~~~~sr~PV~~~~~d~ivGiv~~kDll~~~~~~~~~V~d----im~~ 299 (508)
.+.+++++|++ +++++++++++. ++++.|.+++.+.+||++++ ++++|+++.+|+++...... ...+ ++..
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 35689999987 788999999999 99999999999999999865 78999999999997654221 1111 1111
Q ss_pred cceeecCCCCHHHHHHHHHhCCCeEEEEEe-cCCCccccC
Q 010540 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK-AKGKSKTLP 338 (508)
Q Consensus 300 ~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD-e~g~i~Giv 338 (508)
. .++.+ . .+.+..+.+.+.+.. |+| ..|...+++
T Consensus 223 ~--~~~~~-~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L 257 (486)
T 2cu0_A 223 A--AVSPF-D-IKRAIELDKAGVDVI-VVDTAHAHNLKAI 257 (486)
T ss_dssp E--EECTT-C-HHHHHHHHHTTCSEE-EEECSCCCCHHHH
T ss_pred c--eechh-h-HHHHHHHHHhcCCce-EEEecCCcEeehh
Confidence 1 23333 3 556777888888775 555 344444444
No 130
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=96.49 E-value=0.0008 Score=54.74 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=30.8
Q ss_pred eEEeccccChHHHhhcCCCCCCccccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIGQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++++|+.+|++.+.++++| +|||. .-|+.+.
T Consensus 19 ~~~v~G~~~l~dl~~~l~~~l~~~~~dT--lgG~i~~~lg~iP~ 60 (91)
T 2pli_A 19 RWRIHAATEIEDINTFFGTEYSSEEADT--IGGLVIQELGHLPV 60 (91)
T ss_dssp EEEEETTCBHHHHHHHHCCCCCCSSCCB--HHHHHHHHHSSCCC
T ss_pred EEEEEcCCCHHHHHHHhCCCCCCCCCcc--HHHHHHHHhCCCCC
Confidence 6999999999999999999876655555 59993 2344443
No 131
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.14 E-value=0.0023 Score=68.06 Aligned_cols=115 Identities=13% Similarity=0.066 Sum_probs=94.8
Q ss_pred ccccccccceeecCCCCHHHHHHHHHhCCCeEEEEEe--cCCCccccCCCCCCCccccccccCCCCCCcccccccccccC
Q 010540 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK--AKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKT 370 (508)
Q Consensus 293 V~dim~~~v~~V~~~~~l~d~L~~m~~~~~~~a~VvD--e~g~i~Giv~~t~kDll~~i~~~~~~~~l~~p~~~i~~~~~ 370 (508)
++++|..++.++++++++.++++.|.+++.+.+||+| +.|+++|++ |.+|++.... +...+.+.+.
T Consensus 92 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGiv--t~~Dl~~~~~----------~~~~v~~im~ 159 (491)
T 1zfj_A 92 SENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGII--TNRDMRFISD----------YNAPISEHMT 159 (491)
T ss_dssp HTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEE--EHHHHHHCSC----------SSSBTTTSCC
T ss_pred HHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEE--EHHHHhhhcc----------CCCcHHHHcC
Confidence 5788989999999999999999999999999999999 889999999 9999985421 1112233333
Q ss_pred --CceeecCCCCCccchhhhhcccCCCCcccccccccccccCCCceEEeechHHHHHHHh
Q 010540 371 --ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (508)
Q Consensus 371 --~~~~V~~~~~l~~~~~~~~~~~~~~~~~i~~l~v~~~~~E~G~lvGIVTleDIleeiv 428 (508)
.+++++++.++.+..+.|..+..+...+++ ++|+++|+||.+||++.+.
T Consensus 160 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd---------~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 160 SEHLVTAAVGTDLETAERILHEHRIEKLPLVD---------NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp CSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC---------TTSBEEEEEEHHHHHHHHH
T ss_pred CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc---------CCCcEEEEEEHHHHHHHHh
Confidence 578999999999999999988665544444 7999999999999999986
No 132
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=94.37 E-value=0.01 Score=47.16 Aligned_cols=40 Identities=20% Similarity=0.086 Sum_probs=31.1
Q ss_pred eEEeccccChHHHhhcCCCCCCccccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIGQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++|+|+.+|++..+++++| +|||. .-|+.+.
T Consensus 10 ~~~v~G~~~l~dl~~~l~~~l~~~~~~T--l~G~i~~~lg~iP~ 51 (83)
T 3llb_A 10 DFIVKALTPVDAFNDFFGSEFSDEEFDT--VGGLVMSAFGHLPK 51 (83)
T ss_dssp CEEEETTCBHHHHHHHHCCCCCTTTCSB--HHHHHHHHHSSCCC
T ss_pred EEEEEccCCHHHHHHHhCCCCCCCCCcC--HHHHHHHHhCcCCC
Confidence 6999999999999999999877665665 59993 3344443
No 133
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=94.29 E-value=0.012 Score=47.19 Aligned_cols=40 Identities=10% Similarity=-0.012 Sum_probs=31.2
Q ss_pred eEEeccccChHHHhhcCCCCCCccccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIGQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++|+|+.+|++.++++++|+ |||. .-|+.+.
T Consensus 9 ~~~v~G~~~l~dl~~~l~~~l~~~~~dTl--~G~v~~~lg~iP~ 50 (87)
T 2rk5_A 9 TYIVLGTMTLNDFNEYFETDLESDNVDTI--AGFYLTGVGTIPS 50 (87)
T ss_dssp EEEEETTSBHHHHHHHHTCCCCCTTCCBH--HHHHHHHHCSCCC
T ss_pred EEEEEccCCHHHHHHHhCCCCCCCCcccH--HHHHHHHhCcCCC
Confidence 69999999999999999998766555554 9993 3355443
No 134
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=94.29 E-value=0.011 Score=46.73 Aligned_cols=40 Identities=8% Similarity=-0.001 Sum_probs=31.3
Q ss_pred eEEeccccChHHHhhcCCCCCCccccCccccCCc--ccCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIGQKGAANQGGQ--SKQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~ 486 (508)
+|.|+|.++++|+|+.+|++.++++++| +||| ..-|+.+.
T Consensus 10 ~~~v~g~~~l~dl~~~l~~~l~~~~~~T--l~G~i~~~lg~iP~ 51 (81)
T 3lae_A 10 SMIIDGSANLRDLNKMFNWELDTEDART--FNGLILEHLEEIPD 51 (81)
T ss_dssp CEEEETTCBHHHHHHHHCCCCCCSSCSB--HHHHHHHHCSSCCC
T ss_pred EEEEEeeCCHHHHHHHhCCCCCCCCCcc--HHHHHHHHhCCCCC
Confidence 6999999999999999999877665655 5999 33445443
No 135
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=94.13 E-value=0.012 Score=47.92 Aligned_cols=40 Identities=8% Similarity=0.021 Sum_probs=27.6
Q ss_pred eEEeccccChHHHhhcCCCCCCc---cccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLI---GQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++|+++.+|++.++ ++++ |+|||. .-|+.+.
T Consensus 19 ~~~v~G~~~l~dl~~~l~~~l~~~~~~~~d--TlgG~i~~~lg~iP~ 63 (94)
T 2oai_A 19 SFLIDGTLPIEELREVLGAELPDGEENNYH--TLAGMCISYFGRIPH 63 (94)
T ss_dssp CEEEETTCBHHHHHHHHTC-------CCCS--BHHHHHHHHHSSCCC
T ss_pred eEEEeccCCHHHHHHHhCCCCCcccCCCCc--cHHHHHHHHhCCCCC
Confidence 69999999999999999998765 3444 559993 3354443
No 136
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=94.12 E-value=0.014 Score=47.37 Aligned_cols=40 Identities=13% Similarity=0.005 Sum_probs=29.9
Q ss_pred eEEeccccChHHHhhcCCCC-CC-ccccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSR-RL-IGQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++++|+.+|++ .+ +++++ |+|||. .-|+.+.
T Consensus 18 ~~~v~G~~~l~dl~~~l~~~~l~~~~~~~--Tl~G~i~~~lg~iP~ 61 (92)
T 2o3g_A 18 SLTVEGALEYVELAPQLNLPQQEEDADFH--TVAGLIMEELQTIPD 61 (92)
T ss_dssp CSEEETTCBHHHHTTTTTCCCCCTTCSCS--BHHHHHHHHHTSCCC
T ss_pred EEEEEccCCHHHHHHHhCCCCCCcCCCcc--cHHHHHHHHhCCCCC
Confidence 69999999999999999998 55 34455 559993 3354443
No 137
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=94.09 E-value=0.014 Score=48.35 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=27.8
Q ss_pred eEEeccccChHHHhhcCCCCCCccccCccccCCc
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIGQKGAANQGGQ 478 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 478 (508)
+|+|+|.++++|+|+.+|++..+++++|+ |||
T Consensus 13 ~~~v~G~~~l~dl~~~lg~~l~~e~~dTl--gGl 44 (101)
T 2p3h_A 13 KWLIDGDTPLDEVERAIGYELPEGDYETI--SGL 44 (101)
T ss_dssp EEEEETTCBHHHHHHHHTSCCCCSSCCBH--HHH
T ss_pred EEEEEccCCHHHHHHHhCCCCCCCCCccH--HHH
Confidence 69999999999999999998766555554 999
No 138
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=94.08 E-value=0.019 Score=45.90 Aligned_cols=41 Identities=17% Similarity=0.077 Sum_probs=29.7
Q ss_pred eEEeccccChHHHhhcCCCC-CCccccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSR-RLIGQKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++|+|+.+|++ .+. +.+.-|+|||. .-|+.+.
T Consensus 10 ~~~v~G~~~l~dl~~~l~~~~l~~-~~~~~Tl~G~i~~~lg~iP~ 53 (86)
T 2p4p_A 10 SWLIDGATPLEDVMRALNIHTFPR-DENYETIGGFMMYMLRXIPX 53 (86)
T ss_dssp EEEEETTSBHHHHHHHTTCCCSCC-SCSSCBHHHHHHHHHCSCCC
T ss_pred EEEEEccCCHHHHHHHhCCCCCCc-CCCCccHHHHHHHHhCCCCC
Confidence 69999999999999999996 543 22344559993 3354443
No 139
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=93.84 E-value=0.018 Score=46.47 Aligned_cols=33 Identities=6% Similarity=-0.056 Sum_probs=27.4
Q ss_pred eEEeccccChHHHhhcCCCCCCc--cccCccccCCcc
Q 010540 445 RIRVAAAAAASSVARAPSSRRLI--GQKGAANQGGQS 479 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~ 479 (508)
+|+|+|.++++++|+.+|++.++ ++++ |+|||.
T Consensus 16 ~~~v~G~~~l~dl~~~l~~~l~~~~~~~~--TlgG~i 50 (90)
T 2p13_A 16 TWLMDGWISIRKASNLLEHDLVDEAERYS--TLGGYL 50 (90)
T ss_dssp CEEEETTSBHHHHHHHHTSCCCCTTCCCC--BHHHHH
T ss_pred EEEEECcCCHHHHHHHHCCCCCCcCCCCc--cHHHHH
Confidence 69999999999999999997765 3444 559993
No 140
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=93.15 E-value=0.023 Score=45.37 Aligned_cols=42 Identities=12% Similarity=-0.010 Sum_probs=30.3
Q ss_pred eEEeccccChHHHhhcCCCC-CCccc-cCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSR-RLIGQ-KGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++++|+.++++ .++++ .+.-|+|||. .-|+.+.
T Consensus 10 ~~~v~G~~~l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~ 55 (86)
T 2pls_A 10 SWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQ 55 (86)
T ss_dssp CEEEETTCBHHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSCCC
T ss_pred eEEEEcccCHHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCCCCC
Confidence 69999999999999999998 65411 2344569993 3355443
No 141
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=89.60 E-value=0.083 Score=42.75 Aligned_cols=40 Identities=10% Similarity=-0.043 Sum_probs=28.2
Q ss_pred eEEeccccChHHHhhcCCCCCCcc-----ccCccccCCcc--cCCCCCC
Q 010540 445 RIRVAAAAAASSVARAPSSRRLIG-----QKGAANQGGQS--KQGLPPK 486 (508)
Q Consensus 445 ~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~--~~~~~~~ 486 (508)
+|+|+|.++++++|+.+|+ +.+ ..+.-|+|||. .-|+.+.
T Consensus 16 ~~~v~G~~~l~dl~~~l~~--~~~~~~~~~~~~~TlgG~i~~~lg~iP~ 62 (93)
T 2nqw_A 16 SYLFEGKTSLSDVRHYLDL--PENAFGELGDEVDTLSGLFLEIKQELPH 62 (93)
T ss_dssp CEEEETTCBHHHHHHHHTC--CTTTTHHHHTTCSBHHHHHHHHHCSCCC
T ss_pred EEEEEcccCHHHHHHHhCC--CcccccccCCCcccHHHHHHHHhCcCCC
Confidence 6999999999999999999 321 02344569993 3355443
No 142
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=47.39 E-value=5.7 Score=30.89 Aligned_cols=38 Identities=16% Similarity=0.063 Sum_probs=27.5
Q ss_pred ccccCCceeecCCCCCccchhhhhcccCCC-Cccccccc
Q 010540 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLI 403 (508)
Q Consensus 366 ~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~-~~~i~~l~ 403 (508)
.+.....|.+++.+++.++++.+....+.. +.|++|++
T Consensus 4 ~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~Tl~G~i 42 (83)
T 3llb_A 4 KPLPSGDFIVKALTPVDAFNDFFGSEFSDEEFDTVGGLV 42 (83)
T ss_dssp EECTTSCEEEETTCBHHHHHHHHCCCCCTTTCSBHHHHH
T ss_pred EEeCCCEEEEEccCCHHHHHHHhCCCCCCCCCcCHHHHH
Confidence 445667899999999999999999876533 33444333
No 143
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=44.08 E-value=7.6 Score=30.01 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=27.2
Q ss_pred ccccCCceeecCCCCCccchhhhhcccCCC-Cccccccc
Q 010540 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLI 403 (508)
Q Consensus 366 ~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~-~~~i~~l~ 403 (508)
.+.....|.+++.+++.++++.+....+.. +.|++|++
T Consensus 4 ~~~~dg~~~v~g~~~l~dl~~~l~~~l~~~~~~Tl~G~i 42 (81)
T 3lae_A 4 IQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLI 42 (81)
T ss_dssp EECTTSCEEEETTCBHHHHHHHHCCCCCCSSCSBHHHHH
T ss_pred EEeCCCEEEEEeeCCHHHHHHHhCCCCCCCCCccHHHHH
Confidence 345567899999999999999999876532 33444333
No 144
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=44.00 E-value=6 Score=31.03 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=27.3
Q ss_pred cccCCceeecCCCCCccchhhhhcccCCC-Ccccccccc
Q 010540 367 DEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY 404 (508)
Q Consensus 367 ~~~~~~~~V~~~~~l~~~~~~~~~~~~~~-~~~i~~l~v 404 (508)
+.....|.+++.+++.++++.+....+.. +.|++|++.
T Consensus 4 ~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~dTl~G~v~ 42 (87)
T 2rk5_A 4 EIADNTYIVLGTMTLNDFNEYFETDLESDNVDTIAGFYL 42 (87)
T ss_dssp EEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHHHH
T ss_pred EeCCCEEEEEccCCHHHHHHHhCCCCCCCCcccHHHHHH
Confidence 34566899999999999999999876533 444444443
No 145
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=38.68 E-value=9.8 Score=30.00 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=29.3
Q ss_pred cccccCCceeecCCCCCccchhhhhcccCC--C-Ccccccccc
Q 010540 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQR--S-DSTTNGLIY 404 (508)
Q Consensus 365 i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~--~-~~~i~~l~v 404 (508)
+.+.....|.+++.+++.++++.+....+. . +.|++|++.
T Consensus 9 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~TlgG~i~ 51 (90)
T 2p13_A 9 AEQQADGTWLMDGWISIRKASNLLEHDLVDEAERYSTLGGYLL 51 (90)
T ss_dssp EEECTTSCEEEETTSBHHHHHHHHTSCCCCTTCCCCBHHHHHH
T ss_pred eEEeCCCEEEEECcCCHHHHHHHHCCCCCCcCCCCccHHHHHH
Confidence 344567789999999999999999987764 2 444444444
No 146
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=37.75 E-value=9.2 Score=30.29 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=29.2
Q ss_pred cccccCCceeecCCCCCccchhhhhcccCCC-Ccccccccc
Q 010540 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY 404 (508)
Q Consensus 365 i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~-~~~i~~l~v 404 (508)
+.+.....|.|++.+++.++++.+....+.. +.|++|++.
T Consensus 10 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~TlgG~i~ 50 (93)
T 2r2z_A 10 YTQVADNEYLVQGRMLIDEFNEVFETDLHMSDVDTMAGYLI 50 (93)
T ss_dssp EEEEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHHHH
T ss_pred eEEeCCCEEEEECCCCHHHHHHHhCCCCCCCCcccHHHHHH
Confidence 3445677899999999999999999876543 444444444
No 147
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=36.19 E-value=14 Score=28.72 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=27.1
Q ss_pred ccCCceeecCCCCCccchhhhhcc-cCC-C-Ccccccccc
Q 010540 368 EKTESVVVDVDRPLSSGSMNRLSS-SQR-S-DSTTNGLIY 404 (508)
Q Consensus 368 ~~~~~~~V~~~~~l~~~~~~~~~~-~~~-~-~~~i~~l~v 404 (508)
.....|.+++.+++.++++.+... .+. . +.|++|++.
T Consensus 6 ~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~ 45 (86)
T 2p4p_A 6 RNEDSWLIDGATPLEDVMRALNIHTFPRDENYETIGGFMM 45 (86)
T ss_dssp CCCSEEEEETTSBHHHHHHHTTCCCSCCSCSSCBHHHHHH
T ss_pred eCCCEEEEEccCCHHHHHHHhCCCCCCcCCCCccHHHHHH
Confidence 355679999999999999999985 653 2 445554444
No 148
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=36.03 E-value=11 Score=29.31 Aligned_cols=28 Identities=7% Similarity=-0.162 Sum_probs=23.2
Q ss_pred cccCCceeecCCCCCccchhhhhcc-cCC
Q 010540 367 DEKTESVVVDVDRPLSSGSMNRLSS-SQR 394 (508)
Q Consensus 367 ~~~~~~~~V~~~~~l~~~~~~~~~~-~~~ 394 (508)
+.....|.+++.+++.++++.+... .+.
T Consensus 5 ~~~dg~~~v~G~~~l~dl~~~l~~~~l~~ 33 (86)
T 2pls_A 5 QREDGSWLLDGLIAVPELKDTLGLRAVPE 33 (86)
T ss_dssp ECTTSCEEEETTCBHHHHHHHHTCSCCTT
T ss_pred EeCCCeEEEEcccCHHHHHHHhCCCcCCC
Confidence 3456789999999999999999887 653
No 149
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=35.49 E-value=41 Score=21.78 Aligned_cols=22 Identities=14% Similarity=0.119 Sum_probs=12.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHH
Q 010540 30 FGSVWWFVYAGISCVLVLFAGIM 52 (508)
Q Consensus 30 ~~s~~~~~~~~ii~~lllls~~f 52 (508)
.-|.+|.++++ .++.+++|.+|
T Consensus 14 RTSLy~GLLli-fvlavlFssyf 35 (37)
T 3arc_L 14 RTSLYLGLLLI-LVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHH
T ss_pred hhhHHHHHHHH-HHHHHHhhhhc
Confidence 35667776543 34445555554
No 150
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=34.76 E-value=11 Score=29.87 Aligned_cols=40 Identities=10% Similarity=0.036 Sum_probs=29.0
Q ss_pred cccccCCceeecCCCCCccchhhhhcccCCC-Ccccccccc
Q 010540 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY 404 (508)
Q Consensus 365 i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~-~~~i~~l~v 404 (508)
+.+.....|.|++.+++.++++.+....+.. +.|++|++.
T Consensus 12 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~dTlgG~i~ 52 (91)
T 2pli_A 12 IHAVSSERWRIHAATEIEDINTFFGTEYSSEEADTIGGLVI 52 (91)
T ss_dssp EEEEETTEEEEETTCBHHHHHHHHCCCCCCSSCCBHHHHHH
T ss_pred eEEeCCCEEEEEcCCCHHHHHHHhCCCCCCCCCccHHHHHH
Confidence 4455677899999999999999999876533 444444443
No 151
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=33.90 E-value=11 Score=29.99 Aligned_cols=30 Identities=10% Similarity=-0.015 Sum_probs=22.4
Q ss_pred cccccCCceeecCCCCCccchhhhhcccCC
Q 010540 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQR 394 (508)
Q Consensus 365 i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~ 394 (508)
+.+.....|.|++.+++.++++.+....+.
T Consensus 12 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~ 41 (94)
T 2oai_A 12 MVTREDGSFLIDGTLPIEELREVLGAELPD 41 (94)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHTC----
T ss_pred eEEeCCCeEEEeccCCHHHHHHHhCCCCCc
Confidence 445567789999999999999999987653
No 152
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=30.88 E-value=14 Score=30.05 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=34.3
Q ss_pred cccccCCceeecCCCCCccchhhhhcccCCC-Ccccccccc-cccccC
Q 010540 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIE 410 (508)
Q Consensus 365 i~~~~~~~~~V~~~~~l~~~~~~~~~~~~~~-~~~i~~l~v-~~~~~E 410 (508)
+.+.....|.+++.+++.++++.+....+.. +.|++|++. .+.+++
T Consensus 6 i~~~~dg~~~v~G~~~l~dl~~~lg~~l~~e~~dTlgGli~~~lg~iP 53 (101)
T 2p3h_A 6 ITETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALL 53 (101)
T ss_dssp EEEEETTEEEEETTCBHHHHHHHHTSCCCCSSCCBHHHHHHHHHCSCC
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCC
Confidence 3444667899999999999999999887654 667777766 345553
No 153
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=28.51 E-value=14 Score=29.19 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=26.1
Q ss_pred cccccCCceeecCCCCCccchhhhhcc-cC-CC-Ccccccccc
Q 010540 365 KQDEKTESVVVDVDRPLSSGSMNRLSS-SQ-RS-DSTTNGLIY 404 (508)
Q Consensus 365 i~~~~~~~~~V~~~~~l~~~~~~~~~~-~~-~~-~~~i~~l~v 404 (508)
+.+.....|.|++.+++.++++.+... .+ .. +.|++|++.
T Consensus 11 i~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~ 53 (92)
T 2o3g_A 11 VQGNPDESLTVEGALEYVELAPQLNLPQQEEDADFHTVAGLIM 53 (92)
T ss_dssp ------CCSEEETTCBHHHHTTTTTCCCCCTTCSCSBHHHHHH
T ss_pred eEEcCCCEEEEEccCCHHHHHHHhCCCCCCcCCCcccHHHHHH
Confidence 344466789999999999999999887 65 22 555555554
No 154
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=26.12 E-value=21 Score=29.55 Aligned_cols=41 Identities=15% Similarity=-0.069 Sum_probs=29.6
Q ss_pred ccccccCCceeecCCCCCccchhhhhcc--cCC----CCcccccccc
Q 010540 364 SKQDEKTESVVVDVDRPLSSGSMNRLSS--SQR----SDSTTNGLIY 404 (508)
Q Consensus 364 ~i~~~~~~~~~V~~~~~l~~~~~~~~~~--~~~----~~~~i~~l~v 404 (508)
.+.+.....|.|++.+++.++++.+... .+. .+.|++|+++
T Consensus 28 ~i~~~~dg~~~v~G~~~l~dl~e~lg~~~~l~~~~~~~~dTlgGlil 74 (113)
T 3ded_A 28 EIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVML 74 (113)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHTTCCSCCTTGGGTCCCBHHHHHH
T ss_pred ceEEecCCEEEEecccCHHHHHHHhCCCccCCcccCCCCccHHHHHH
Confidence 3455667789999999999999999887 653 2445554444
No 155
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=20.15 E-value=2.3e+02 Score=23.70 Aligned_cols=16 Identities=13% Similarity=0.389 Sum_probs=11.0
Q ss_pred HHHHHHhhhcchhhHH
Q 010540 128 VTFVLFFGEVIPQAIC 143 (508)
Q Consensus 128 t~lilifgEiiPK~la 143 (508)
|...+=+|++.|++..
T Consensus 54 T~tTvGyGDi~P~t~~ 69 (137)
T 4h33_A 54 TATTVGYGDIVPVTPI 69 (137)
T ss_dssp HHTTCCCSSSCCCSHH
T ss_pred HHHcccCCCCCCCCHh
Confidence 4334458999999754
Done!