Query 010541
Match_columns 507
No_of_seqs 216 out of 1619
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 09:02:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010541.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010541hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1un8_A Dihydroxyacetone kinase 100.0 2E-140 8E-145 1133.5 42.9 463 1-501 73-551 (552)
2 3ct4_A PTS-dependent dihydroxy 100.0 1E-102 3E-107 792.4 27.0 261 1-266 70-332 (332)
3 1oi2_A Hypothetical protein YC 100.0 1E-102 4E-107 795.3 24.8 267 1-268 78-365 (366)
4 2iu4_A DHA-DHAQ, dihydroxyacet 100.0 9E-103 3E-107 792.8 23.4 263 1-268 66-331 (336)
5 3pnl_B PTS-dependent dihydroxy 100.0 7.6E-51 2.6E-55 394.0 20.5 196 302-501 4-210 (211)
6 3cr3_A PTS-dependent dihydroxy 100.0 1E-47 3.6E-52 366.9 18.0 183 303-500 3-191 (192)
7 3nyi_A FAT acid-binding protei 75.6 10 0.00035 37.6 9.3 94 13-120 67-165 (297)
8 3pl5_A SMU_165, putative uncha 74.3 10 0.00034 38.2 8.9 199 13-240 98-308 (320)
9 3fdj_A DEGV family protein; GU 74.3 14 0.00046 36.4 9.6 204 13-245 62-275 (278)
10 3jr7_A Uncharacterized EGV fam 73.1 11 0.00036 37.6 8.6 197 13-235 82-287 (298)
11 2dt8_A DEGV family protein; fa 61.3 24 0.00083 34.5 8.4 93 12-121 62-157 (280)
12 1pzx_A Hypothetical protein AP 56.9 37 0.0013 33.4 8.8 97 12-122 63-164 (289)
13 2bz1_A GTP cyclohydrolase II; 52.9 6.5 0.00022 37.0 2.4 56 4-59 53-143 (196)
14 3ct6_A PTS-dependent dihydroxy 50.3 25 0.00087 30.6 5.7 79 15-119 45-125 (131)
15 2g7z_A Conserved hypothetical 46.4 42 0.0014 32.9 7.3 94 12-122 66-163 (282)
16 3b48_A Uncharacterized protein 42.9 48 0.0016 28.7 6.4 77 15-113 50-129 (135)
17 1mgp_A Hypothetical protein TM 41.1 97 0.0033 30.8 9.1 94 12-122 89-188 (313)
18 3djh_A Macrophage migration in 40.7 18 0.00061 30.3 3.1 40 190-229 57-96 (114)
19 3egl_A DEGV family protein; al 40.4 25 0.00085 34.5 4.5 206 14-248 45-263 (277)
20 3fys_A Protein DEGV; fatty aci 40.3 1.2E+02 0.004 30.3 9.6 93 12-120 96-192 (315)
21 3b64_A Macrophage migration in 38.6 23 0.00079 29.3 3.5 41 189-229 57-97 (112)
22 1uiz_A MIF, macrophage migrati 37.7 24 0.00083 29.3 3.5 41 189-229 57-97 (115)
23 4dh4_A MIF; trimer, isomerase; 37.1 18 0.00062 30.2 2.6 40 190-229 58-97 (114)
24 3fwu_A Macrophage migration in 36.8 22 0.00074 31.0 3.1 41 190-230 79-119 (133)
25 3lup_A DEGV family protein; PS 36.5 92 0.0031 30.4 8.0 195 12-246 65-282 (285)
26 1hfo_A Migration inhibitory fa 35.1 24 0.00083 29.1 3.0 40 190-229 57-96 (113)
27 2os5_A Acemif; macrophage migr 34.9 32 0.0011 28.8 3.8 42 188-229 56-97 (119)
28 2xcz_A Possible ATLS1-like lig 31.3 29 0.00098 28.8 2.9 41 189-229 57-97 (115)
29 3fwt_A Macrophage migration in 30.8 22 0.00077 30.8 2.2 41 190-230 79-119 (133)
30 3t5s_A Gilaa.00834.A, macropha 29.2 21 0.00071 31.2 1.7 41 189-229 78-118 (135)
31 2wkb_A Macrophage migration in 27.7 29 0.00098 29.4 2.3 41 189-229 57-97 (125)
32 2yxd_A Probable cobalt-precorr 27.0 1.7E+02 0.006 24.6 7.4 56 3-66 102-157 (183)
33 3ihu_A Transcriptional regulat 21.4 1.3E+02 0.0045 27.5 5.8 64 161-237 16-83 (222)
34 2lnd_A De novo designed protei 20.6 1.7E+02 0.0058 23.7 5.3 51 149-212 23-73 (112)
No 1
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=100.00 E-value=2.4e-140 Score=1133.55 Aligned_cols=463 Identities=44% Similarity=0.656 Sum_probs=413.1
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (507)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R 80 (507)
||||||||+||||||++||++|||++++++|||||||||||||||||||+|+|+++||+|++|+|+||||++++ +||
T Consensus 73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R 149 (552)
T 1un8_A 73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP 149 (552)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 899
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCC-CCCCCeeEEeccccCCCCccccc
Q 010541 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD 159 (507)
Q Consensus 81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg~~~~~-~l~~~e~E~G~GiHgEpG~~~~~ 159 (507)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus 150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~ 229 (552)
T 1un8_A 150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID 229 (552)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec--ccccccC
Q 010541 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD 237 (507)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G--~~~TSld 237 (507)
++++++++++|+++|+++ ++++ |+|+|||||||+||+||||++++++.++|+++ | +|+|+| +||||||
T Consensus 230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld 299 (552)
T 1un8_A 230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD 299 (552)
T ss_dssp CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence 999999999999999986 6777 89999999999999999999999999999888 8 999999 9999999
Q ss_pred CCcceEEEeeccHHHHHhhcCcCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCcccCCCccccccHHHHHHHHHHHH
Q 010541 238 MAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIP--VPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAA 315 (507)
Q Consensus 238 m~GfSiTll~ld~~l~~~ldap~~a~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 315 (507)
|+|||||||++||++++|||+||++|+||+... + ...+ .+... . . . .. ..+.. + ..+++||..+|
T Consensus 300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~~~---~-~~~~~~~~~~~-~-~-~-~~-~~~~~---~-~~l~~~l~~~a 366 (552)
T 1un8_A 300 MKGFSLTAIVLEESIEKALLTEVETSNWPTPVP---P-REITCVVSSHA-S-A-R-VE-FQPSA---N-ALVAGIVELVT 366 (552)
T ss_dssp BEEEEEEEEECCTTHHHHHHSCCCCSSCCCCBC---C-CCCCEECCCCC-C-C-S-CC-CCCBC---C-HHHHHHHHHHH
T ss_pred CCcceEEeecCCHHHHHHhcCCCCCCCCCCccC---c-ccccccccccc-c-c-c-CC-CCcch---h-HHHHHHHHHHH
Confidence 999999999999999999999999999997431 1 0000 00000 0 0 0 00 11111 3 56899999999
Q ss_pred HHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 010541 316 EAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYY--PLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYA 393 (507)
Q Consensus 316 ~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~--~~~~~~~~l~~i~~a~~~~~GGtSG~Ly~~~f~~~a~ 393 (507)
+.|++++++||+||+++||||||+||++||+++.+.+++ . +..++.++|+.+++.+++.||||||+|||+||+++++
T Consensus 367 ~~l~~~~d~Ln~LD~~VGDGD~GtNM~~G~~av~~~l~~-~~~~~~~~~~~l~~i~~~ll~~~GG~SG~Lyg~~f~~~ak 445 (552)
T 1un8_A 367 ATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHR-QQLPLNNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQ 445 (552)
T ss_dssp HHHHHTHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHT-TCSBTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999973 3 4568999999999999999999999999999999999
Q ss_pred HhhccCCCCCChHHH-------HhhcCCCCCCcchhhhHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcch-hh
Q 010541 394 KLKASSKSGITSKQF-------SKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHM-QA 465 (507)
Q Consensus 394 ~l~~~~~~~~~~~~~-------~~~G~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~~aA~~gae~Tk~m-~A 465 (507)
.++++ ++++ +.| ++||+++||||||||+|+|+++++++ +.++|++++++|++|+++|++| +|
T Consensus 446 ~l~~~--~~l~-~al~ag~~~i~~~g~AkpGdkTMLDaL~Paaeal~~-------~~~~l~~a~~AA~~gae~T~~m~~A 515 (552)
T 1un8_A 446 KLEQG--ANVV-EALNTGLAQMKFYGGADEGDRTMIDALQPALTSLLA-------QPKNLQAAFDAAQAGAERTCLSSKA 515 (552)
T ss_dssp HHHTT--CCHH-HHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HhcCC--chHH-HHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhCcccchh
Confidence 99865 3444 344 88999999999999999999999965 3456899999999999999999 99
Q ss_pred hhccccccCcccC-CCCCCchHHHHHHHHHHHHHHHH
Q 010541 466 QAGRSTYISPEIL-ASVPDPGAMAAAAWYRAAALAVK 501 (507)
Q Consensus 466 k~GRAsY~gers~-g~~pDPGA~av~~il~al~~~~~ 501 (507)
++|||||+|||++ |++ ||||+++++||+++++.+.
T Consensus 516 ~~GRAsYlgers~~Gvv-DpGA~~~~~il~al~~~l~ 551 (552)
T 1un8_A 516 NAGRASYLSSESLLGNM-DPGAQRLAMVFKALAESEL 551 (552)
T ss_dssp CC--------CCCGGGC-CHHHHHHHHHHHHHHTTC-
T ss_pred hhhhhcccchhhcCCCC-CcCHHHHHHHHHHHHHHhc
Confidence 9999999999998 765 9999999999999987653
No 2
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=100.00 E-value=1e-102 Score=792.41 Aligned_cols=261 Identities=36% Similarity=0.588 Sum_probs=247.5
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (507)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R 80 (507)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 149 (332)
T 3ct4_A 70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR 149 (332)
T ss_dssp SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 010541 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (507)
Q Consensus 81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (507)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~ 229 (332)
T 3ct4_A 150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK 229 (332)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCCC
Q 010541 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239 (507)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G~~~TSldm~ 239 (507)
++++++++++|+++|+++ ++++++|+|+|||||||+||+||||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus 230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~ 304 (332)
T 3ct4_A 230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA 304 (332)
T ss_dssp CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence 999999999999999986 78889999999999999999999999999999999888 9999999999999999999
Q ss_pred cceEEEeeccH-HHHHhhcCcCCCCCCC
Q 010541 240 GFSISIMKADE-VILKHLDATTKAPHWP 266 (507)
Q Consensus 240 GfSiTll~ld~-~l~~~ldap~~a~~w~ 266 (507)
|||||||++|| ||++|||+||++|+|+
T Consensus 305 G~SiTll~ldd~el~~lldaP~~tp~w~ 332 (332)
T 3ct4_A 305 GLSLTMIKLEDDQWLKNLNEDVKTISWG 332 (332)
T ss_dssp EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence 99999999999 9999999999999994
No 3
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=100.00 E-value=1.2e-102 Score=795.33 Aligned_cols=267 Identities=39% Similarity=0.624 Sum_probs=251.0
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (507)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R 80 (507)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+.+||
T Consensus 78 MLdaAv~G~VFaSPs~~qi~~ai~av~~g~GvL~ivkNYtGDvlNF~mA~E~a~~eGi~v~~Vvv~DDvAv~~~~~~~gR 157 (366)
T 1oi2_A 78 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR 157 (366)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 010541 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (507)
Q Consensus 81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (507)
||+|||||||||+|||||+|+||+||+++++++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 158 RGvAGtvlv~KiaGAaAe~G~sL~ev~~~a~~~~~~~~SiGvaL~~ctvP~~g~p~F~l~~~emE~G~GIHGEPG~~r~~ 237 (366)
T 1oi2_A 158 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP 237 (366)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--------------------ccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 010541 160 LQPVDVVVSHVLKQILST--------------------ETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219 (507)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~--------------------~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~ 219 (507)
++++++++++|+++|+++ +|.|++++++|+|+|||||||+||++|||++++++.++|+++
T Consensus 238 ~~sa~elv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vLVNgLG~T~~~El~iv~~~v~~~L~~~ 317 (366)
T 1oi2_A 238 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA 317 (366)
T ss_dssp CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccccccccccccccccccccccccCCCCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC
Confidence 999999999999999986 155689999999999999999999999999999999999888
Q ss_pred cCCeEEEeeecccccccCCCcceEEEeeccHHHHHhhcCcCCCCCCCCC
Q 010541 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (507)
Q Consensus 220 ~~i~v~r~~~G~~~TSldm~GfSiTll~ld~~l~~~ldap~~a~~w~~~ 268 (507)
||+|+|+|+|+|||||||+|||||||++|||+++|||+||++|+|||+
T Consensus 318 -gi~v~r~~vG~y~TSLdM~G~SiTLl~lddel~~lldaP~~tpa~~~g 365 (366)
T 1oi2_A 318 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 365 (366)
T ss_dssp -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred -CCeEEEEeeecccCCCCCCccEEEEEecCHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999984
No 4
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=100.00 E-value=9.2e-103 Score=792.80 Aligned_cols=263 Identities=32% Similarity=0.493 Sum_probs=257.2
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (507)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R 80 (507)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 66 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 145 (336)
T 2iu4_A 66 MLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRH 145 (336)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCSSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHHHHHTCCSCC
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhCCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877678999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCCCCCCCeeEEeccccCCCCcccccC
Q 010541 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADL 160 (507)
Q Consensus 81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg~~~~~~l~~~e~E~G~GiHgEpG~~~~~~ 160 (507)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+.+|+|+|++||||||||||||||++|.++
T Consensus 146 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGvaL~~ctvP~~~p~F~l~~~emE~G~GIHGEpG~~r~~~ 225 (336)
T 2iu4_A 146 RGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIXGEPGYRVEKF 225 (336)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEEEEECCEETTTEESSCCCTTEEEESCCCCCCCCSEEEEC
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCccCCCCCCCCccCCCceEecccccCCCCccccCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC--CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCC
Q 010541 161 QPVDVVVSHVLKQILSTETNYVPIT--RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDM 238 (507)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~~~~~--~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G~~~TSldm 238 (507)
+++++++++|+++|+++ ++++ ++|+|+|||||||+||+||||++++++.++|+++ ||+|+|+|+|+|||||||
T Consensus 226 ~~a~el~~~m~~~ll~~----l~~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSLdM 300 (336)
T 2iu4_A 226 EGSERIAIELVNKLKAE----INWQKKANKNYILLVNGLGSTTLMELYSFQYDVMRLLELE-GLSVKFCKVGNLMTSCDM 300 (336)
T ss_dssp CCHHHHHHHHHHHHHHH----HCGGGCSCCEEEEEEEECBSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCTTB
T ss_pred CCHHHHHHHHHHHHHhh----CccccCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC-CCeEEEEeeecccCccCC
Confidence 99999999999999986 7887 8999999999999999999999999999999888 999999999999999999
Q ss_pred CcceEEEeeccH-HHHHhhcCcCCCCCCCCC
Q 010541 239 AGFSISIMKADE-VILKHLDATTKAPHWPVG 268 (507)
Q Consensus 239 ~GfSiTll~ld~-~l~~~ldap~~a~~w~~~ 268 (507)
+|||||||++|| ||++|||+||++|+|+..
T Consensus 301 ~G~SiTll~ldd~el~~lldaP~~tpa~~~~ 331 (336)
T 2iu4_A 301 SGISLTLCSVKDPKWLDYLNVPTGAFAWLEH 331 (336)
T ss_dssp EEEEEEEEECCSTHHHHHHHSCCCCTTCCCC
T ss_pred CccEEEEEECCHHHHHHHhcCCCCCcccchh
Confidence 999999999999 999999999999999753
No 5
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} SCOP: a.208.1.0 PDB: 2btd_A*
Probab=100.00 E-value=7.6e-51 Score=393.97 Aligned_cols=196 Identities=25% Similarity=0.352 Sum_probs=184.8
Q ss_pred ccHHHHHHHHHHHHHHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhcCCChH
Q 010541 302 QQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSG 381 (507)
Q Consensus 302 ~~~~~~~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~~~~~~~~~l~~i~~a~~~~~GGtSG 381 (507)
.+...+++||..+|+.|++++++||+||++|||||||+||.+||+++.+.+++ .+..++.++|..+++.+++.||||||
T Consensus 4 ~~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~av~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG 82 (211)
T 3pnl_B 4 LSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPA-IADKDIGFILKNTGMTLLSSVGGASG 82 (211)
T ss_dssp EEHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCSCHHHHHHHHHHHHHHHSGG-GTTSCHHHHHHHHHHHHHTTTCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHcCCCcHH
Confidence 56788999999999999999999999999999999999999999999999984 56678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCChHHH-----------HhhcCCCCCCcchhhhHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010541 382 ILYHIFCKAAYAKLKASSKSGITSKQF-----------SKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSS 450 (507)
Q Consensus 382 ~Ly~~~f~~~a~~l~~~~~~~~~~~~~-----------~~~G~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~ 450 (507)
||||+||+++++.++++ ++++.++| ++||+++||||||||+|+|+++++++...++.++.++|++++
T Consensus 83 ~L~~~~f~~~a~~l~~~--~~~~~~~~~~al~~a~~~i~~~g~a~~GdkTmlD~l~pa~~a~~~~~~~~~~~~~~l~~a~ 160 (211)
T 3pnl_B 83 PLFGTFFIRAAQATQAR--QSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAAS 160 (211)
T ss_dssp HHHHHHHHHHHHHHCSC--SEEEHHHHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHhHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999875 56777777 889999999999999999999999998888999999999999
Q ss_pred HHHHHHHHhCcchhhhhccccccCcccCCCCCCchHHHHHHHHHHHHHHHH
Q 010541 451 EAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVK 501 (507)
Q Consensus 451 ~aA~~gae~Tk~m~Ak~GRAsY~gers~g~~pDPGA~av~~il~al~~~~~ 501 (507)
++|++|+++|++|+|++|||||+|||++|++ ||||+++++||++|++.+.
T Consensus 161 ~aA~~g~e~T~~m~a~~GRAsylgers~G~~-DpGA~~~~~il~~l~~~l~ 210 (211)
T 3pnl_B 161 SIAESAAQSTITMQARKGRASYLGERSIGHQ-DPGATSVMFMMQMLALAAK 210 (211)
T ss_dssp HHHHHHHHHGGGSCCCSSGGGGGGGGGTTSC-CHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhchhhhHHhhhhhhccccccCCC-CCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999765 9999999999999998763
No 6
>3cr3_A PTS-dependent dihydroxyacetone kinase, ADP- binding subunit DHAL; transient protein-protein complex transferase complex PTS- dependent dihydroxyacetone kinase; HET: ADP; 2.10A {Lactococcus lactis subsp} SCOP: a.208.1.1
Probab=100.00 E-value=1e-47 Score=366.88 Aligned_cols=183 Identities=21% Similarity=0.288 Sum_probs=163.2
Q ss_pred cHHHHHHHHHHHHHHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhcCCChHH
Q 010541 303 QGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGI 382 (507)
Q Consensus 303 ~~~~~~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~~~~~~~~~l~~i~~a~~~~~GGtSG~ 382 (507)
+...+++||..+|+.|++++++||+||++|||||||+||.+|++++.+.+++ .+..++.++|+.+++.+++.|||||||
T Consensus 3 ~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~a~~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG~ 81 (192)
T 3cr3_A 3 TIDTTIEWLGKFNEKIQENKAYLSELDGPIGDGDHGANMARGMSETMKALEV-SNFGNVSEIFKKVAMTLMSKVGGASGP 81 (192)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHTTTTSCSCHHHHHHHHHHHHHHHHHH-CCCSSHHHHHHHHHHHHHHHCCSTHHH
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHhcCCCcHHH
Confidence 4677999999999999999999999999999999999999999999999974 566789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCC------ChHHHHhhcCCCCCCcchhhhHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 010541 383 LYHIFCKAAYAKLKASSKSGI------TSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAG 456 (507)
Q Consensus 383 Ly~~~f~~~a~~l~~~~~~~~------~~~~~~~~G~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~~aA~~g 456 (507)
|||+||+++++.+-+. ..+ ..+.+++||+++||||||||+|+|+++++++. + +++++|++|
T Consensus 82 L~~~~f~~~a~~l~~~--~~~a~al~~~~~~i~~~g~a~~gdkTmlDal~pa~~a~~~~----------~-~a~~aA~~g 148 (192)
T 3cr3_A 82 LYGSAFLAMSKTAIET--LDTSELIYAGLEAIQKRGKAQVGEKTMVDIWSAFLNDLQTD----------S-ASKDNLEKV 148 (192)
T ss_dssp HHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHTT----------C-CCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHH----------H-HHHHHHHHH
Confidence 9999999999998211 110 01112889999999999999999999999642 1 689999999
Q ss_pred HHhCcchhhhhccccccCcccCCCCCCchHHHHHHHHHHHHHHH
Q 010541 457 AESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAV 500 (507)
Q Consensus 457 ae~Tk~m~Ak~GRAsY~gers~g~~pDPGA~av~~il~al~~~~ 500 (507)
+++|++|+|++|||||+|||++|++ ||||+++++||+++.+.+
T Consensus 149 ~e~T~~m~a~~GRAsylgers~G~~-DpGA~~~~~il~~~~~~~ 191 (192)
T 3cr3_A 149 VKASAGLLATKGRASYLGERSIGHI-DPGTQSSAYLFETLLEVV 191 (192)
T ss_dssp HHHGGGSCCCSSGGGGGGGGGTTSC-CHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhHHHHhhhhhccccccCCC-CccHHHHHHHHHHHHHHh
Confidence 9999999999999999999999665 999999999999998865
No 7
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=75.61 E-value=10 Score=37.59 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhh
Q 010541 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (507)
Q Consensus 13 SPs~~~i~~ai~~~-~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v 87 (507)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+ | | -+.--.|.-
T Consensus 67 qps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~V--i-D-----------S~~~s~g~g 132 (297)
T 3nyi_A 67 LPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICV--I-D-----------SKQNTVTQA 132 (297)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHCTTCCEEE--E-E-----------CSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEE--E-e-----------CCchHHHHH
Confidence 48999999999765 3456788775 45677777777888777554 444443 3 2 122334544
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccc
Q 010541 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120 (507)
Q Consensus 88 ~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~ 120 (507)
++..-|-.++++|+|++||.+..++..+++++.
T Consensus 133 ~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~ 165 (297)
T 3nyi_A 133 LLIDQFVRMLEDGLSFEQAMSKLDALMASARIF 165 (297)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEE
Confidence 555557889999999999999999999887776
No 8
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=74.27 E-value=10 Score=38.24 Aligned_cols=199 Identities=14% Similarity=0.103 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhh
Q 010541 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (507)
Q Consensus 13 SPs~~~i~~ai~~~-~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v 87 (507)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+ |+- +.--.|.-
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~V--iDS------------~~~s~g~g 163 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEI--VDT------------LAATGGEG 163 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHCTTCCEEE--EEC------------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhCCCCeEEE--EcC------------CchHHHHH
Confidence 48999999998765 3456787775 44667666777888877654 344433 321 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceecc--ccccCCC-CCCCCCCCCeeEEeccccCC-CCc--ccccCC
Q 010541 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VCTLPGQ-VTSDRLGPGKMELGLGIHGE-PGA--AVADLQ 161 (507)
Q Consensus 88 ~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~--~c~~Pg~-~~~~~l~~~e~E~G~GiHgE-pG~--~~~~~~ 161 (507)
++..-|-.++++|+|++||.+..++..+++.+.=+-=+ .=.-=|+ .+.--+--+-+-|=-=+|=+ -|. -..+..
T Consensus 164 ~lv~~Aa~l~~~G~s~eeI~~~le~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~iG~lL~IKPIl~~~~dG~l~~~~KvR 243 (320)
T 3pl5_A 164 YLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAIVGSLVNIKPLLWLDASGKLVPIAKLR 243 (320)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEECSCSHHHHHHTCCC--------CTTEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECChHHHHhCCCccHHHHHHHhhhCceEEEEEccCCeEEEEeeec
Confidence 66666678999999999999999999998877633100 0000011 00000000001111112222 342 235566
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeecccccccCCCc
Q 010541 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTSLDMAG 240 (507)
Q Consensus 162 ~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i-~v~r~~~G~~~TSldm~G 240 (507)
+.+..++.|++.+.+. .. ..+ +.+.+. + . .|. +.++.+.|+++++. .+.-..+|+-+.+==.+|
T Consensus 244 g~kka~~~lv~~~~~~----~~---~~~-v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~ig~vIg~H~GpG 308 (320)
T 3pl5_A 244 GRKKGMKEMLKRATAD----VA---HDT-AVVAYA-N-D--SEA---AENLKEQLLANEKIKNVVTLPLGPVISTHVGPN 308 (320)
T ss_dssp SHHHHHHHHHHHHTSS----CC---SSE-EEEEES-S-C--HHH---HHHHHHHHHTSTTCCEEEEEECCHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHh----cC---CCE-EEEEeC-C-C--HHH---HHHHHHHHHhhcCCCcEEEEEeccEEEEEecCC
Confidence 7778889999888653 22 333 334443 2 1 233 35566777776654 333344565554333333
No 9
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=74.25 E-value=14 Score=36.37 Aligned_cols=204 Identities=10% Similarity=0.090 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHH
Q 010541 13 SPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVN 90 (507)
Q Consensus 13 SPs~~~i~~ai~~~~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~v~ 90 (507)
.||+.++.++.+ +...||+|- ..-+|=.=+.-+|+++..++--+.++.+|+- |.--.|.-++.
T Consensus 62 qps~~~~~~~f~---~~~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS------------~~~s~g~g~~v 126 (278)
T 3fdj_A 62 CPGIDAWLEAFG---DDDEIFVVTITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDS------------KSTGPQMRIIL 126 (278)
T ss_dssp CCCHHHHHHHHT---TCSEEEEEESCTTTCSHHHHHHHHHHHHHTTCTTCEEEEEEC------------SSCTHHHHHHH
T ss_pred CCCHHHHHHHHh---cCCcEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEcC------------CchhHHHHHHH
Confidence 488888888886 345677665 4456766677788887765522233333332 22335555666
Q ss_pred HHHhHHHHcCCCHHHHHHHHHHHHhhhcccceecc--ccccCCCCC-CCCCCCCeeEEeccccC-CCCc--ccccCCCHH
Q 010541 91 KIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VCTLPGQVT-SDRLGPGKMELGLGIHG-EPGA--AVADLQPVD 164 (507)
Q Consensus 91 KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~--~c~~Pg~~~-~~~l~~~e~E~G~GiHg-EpG~--~~~~~~~a~ 164 (507)
.-|-.++++|+|++||.+..++..+++++.=+-=+ .=.-=|+-. .--+--+-+-|=-=+|= +-|. -..+..+.+
T Consensus 127 ~~A~~~~~~G~s~~eI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg~k 206 (278)
T 3fdj_A 127 EQLQQMIEEGKKFEEIDGAIDAYMQKTRLFCSLKSLHNLAQNGRVSKVVASAAEVLGISVIGTASSHGTLEAIGKCRGDK 206 (278)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESCCHHHHHTTSSCHHHHHGGGSTTEEEEEEECTTSSEEEEEEEESHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcceEEEEECChHHHHHCCcchHHHHHHHHhhCcEEEEEEccCCeEEEeeeecCHH
Confidence 66778999999999999999999988877633100 000001100 00000000111111232 3342 234556667
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeeeccccc-ccCCCcce
Q 010541 165 VVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYTGSFMT-SLDMAGFS 242 (507)
Q Consensus 165 ~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~-i~v~r~~~G~~~T-Sldm~GfS 242 (507)
..+++|++.+.+. .. ...++. +.+. + . + |. +.++.+.|+++++ .++.-..+|.-++ =.+-.|+.
T Consensus 207 ka~~~l~~~~~~~-----~~-~~~~v~-i~h~-~-~-~-e~---a~~l~~~l~~~~~~~~i~i~~~g~vi~~h~G~gal~ 272 (278)
T 3fdj_A 207 KLLVKLQALLDDA-----GY-EGGKLR-ICHV-E-N-E-AL---ADKIADMIKQAYGTTDVCVYKAGGLCSYYAERGGII 272 (278)
T ss_dssp HHHHHHHHHHHHH-----TC-CSCCEE-EEES-S-C-H-HH---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHh-----CC-CCcEEE-EEec-C-C-H-HH---HHHHHHHHHHhCCCCcEEEEEeCcEEEEEECCCeEE
Confidence 7888888887653 11 233444 3332 1 1 2 32 3444555555544 3444445565554 34555565
Q ss_pred EEE
Q 010541 243 ISI 245 (507)
Q Consensus 243 iTl 245 (507)
|..
T Consensus 273 i~~ 275 (278)
T 3fdj_A 273 LSC 275 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 10
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=73.08 E-value=11 Score=37.61 Aligned_cols=197 Identities=14% Similarity=0.152 Sum_probs=107.9
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHH
Q 010541 13 SPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVN 90 (507)
Q Consensus 13 SPs~~~i~~ai~~~~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~v~ 90 (507)
.||+.++.++.+. ....||+|- ..-+|=.=+.-+|+++..++--+.++.+|+- |.--.|.=++.
T Consensus 82 qps~~~~~~~f~~--~~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~ViDS------------~~~s~g~g~lv 147 (298)
T 3jr7_A 82 CPSPERYMESYHC--DAERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIHVFNS------------RSASVGETLIA 147 (298)
T ss_dssp CCCHHHHHHHHCS--SCSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEEEEEC------------SSCTHHHHHHH
T ss_pred CCCHHHHHHHHHh--cCCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEEEECC------------CchhHHHHHHH
Confidence 4899999999885 455677664 4456766677788887765411223333322 22234555666
Q ss_pred HHHhHHHHcCCCHHHHHHHHHHHHhhhccccee--ccccccCCC-CCCCCCCCCeeEEeccc-cCCCCc--ccccCCCHH
Q 010541 91 KIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ-VTSDRLGPGKMELGLGI-HGEPGA--AVADLQPVD 164 (507)
Q Consensus 91 KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gva--l~~c~~Pg~-~~~~~l~~~e~E~G~Gi-HgEpG~--~~~~~~~a~ 164 (507)
.-|-.++++|.|++||.+..++..+++++.=+- |..=.-=|+ .+.--+--+-+-|=-=+ +.+-|. -..+..+.+
T Consensus 148 ~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg~k 227 (298)
T 3jr7_A 148 LKVQQCEKAGMTFEEVVESVECYIEEQHTYFVLENLDTLRKNGRLTGIKSLVAGALNIKPIMGSTPQGTICQKEKARGMK 227 (298)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHCCEEEECSCCHHHHHTTCSTTCCC--CCCTTEEEEEEECTTSCEEEEEEEESHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhhCeEEEEeCChHHHHhCCeehHHHHHHHhhcCcEEEEEEccCCeEEEeeecCCHH
Confidence 667789999999999999999999988876331 111000011 01000111112222223 234453 235666777
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeecccccc
Q 010541 165 VVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTS 235 (507)
Q Consensus 165 ~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i-~v~r~~~G~~~TS 235 (507)
..++.|++.+.+. .. ......+.+.+. +. .|. +.++.+.|+++++. ++.-..+|+.+.+
T Consensus 228 ka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~~---~e~---a~~l~~~l~~~~~~~~i~i~~~g~vig~ 287 (298)
T 3jr7_A 228 KALVKMADCVAAD----VV-NAGDKILAIAHC-NC---EER---AKEVQRLLKERFAVKSSFIVDTSGISTV 287 (298)
T ss_dssp HHHHHHHHHHHHH----CC-SGGGCEEEEEES-SC---HHH---HHHHHHHHHHHCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHH----hc-cCCCcEEEEEeC-CC---HHH---HHHHHHHHHhhcCCCcEEEEEEccEEEE
Confidence 8888888888764 22 112233334432 22 232 33555666666553 4444456665543
No 11
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=61.28 E-value=24 Score=34.51 Aligned_cols=93 Identities=19% Similarity=0.142 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHhcc-CCCCeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhh
Q 010541 12 ASPPVDSILAGIHAVT-GPMGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (507)
Q Consensus 12 aSPs~~~i~~ai~~~~-~~~Gvl~iv~--NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~ 88 (507)
+.||+.++.++.+... .+..||+|-- .-+|= |. ++.+|+.+ ++-++.+| | -+..-.|.-+
T Consensus 62 Sqps~~~~~~~f~~l~~~~~~ii~i~lSs~LSGT---y~-sA~~aa~~-~~~~I~Vi-D-----------S~~~s~g~g~ 124 (280)
T 2dt8_A 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGT---VQ-SAELAAQE-FPGRVTVV-D-----------TQAASLGVGM 124 (280)
T ss_dssp ECCCHHHHHHHHHHHTTSCSEEEEEESCTTTCTH---HH-HHHHHHTT-STTSEEEE-E-----------CSCCTHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCcHhHH---HH-HHHHHHHh-CCCCEEEE-C-----------CchhHHHHHH
Confidence 3589999999997764 3355666632 12332 22 23334333 11122222 2 1233355566
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccc
Q 010541 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMG 121 (507)
Q Consensus 89 v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~g 121 (507)
+..-|-.++++|+|++||.+..++..+++++.=
T Consensus 125 ~v~~a~~l~~~G~s~eei~~~l~~~~~~~~~~f 157 (280)
T 2dt8_A 125 MVLRAKELLEEGQSLEAVLAELERLRRDHFVRF 157 (280)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEE
Confidence 666777889999999999999999999888763
No 12
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=56.85 E-value=37 Score=33.39 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHhc-cCCCCeEEEee--ccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchh
Q 010541 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (507)
Q Consensus 12 aSPs~~~i~~ai~~~-~~~~Gvl~iv~--NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~~RRG~aG~ 86 (507)
+.||+.++.++.+.. ..+..||+|-- .-+|=.=+.-+|+++..++ +.+|. +| | -|..-.|.
T Consensus 63 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~--Vi-D-----------S~~~s~g~ 128 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLT--II-D-----------SKCASLGQ 128 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEE--EE-E-----------CCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEE--EE-c-----------CchhhHHH
Confidence 358999999999765 44456777643 3355555566777665432 33433 22 2 12333555
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccce
Q 010541 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (507)
Q Consensus 87 v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gv 122 (507)
-++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 g~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~ 164 (289)
T 1pzx_A 129 GLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFT 164 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCEEEEE
Confidence 666667778899999999999999999998887643
No 13
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=52.95 E-value=6.5 Score=37.04 Aligned_cols=56 Identities=23% Similarity=0.237 Sum_probs=42.2
Q ss_pred eeccCCCCCCC---CHHHHHHHHHhcc-CCCCeEEEeecc-------------------------------ccccccHHH
Q 010541 4 AAICGDVFASP---PVDSILAGIHAVT-GPMGCLLIVTNY-------------------------------TGDRLNFGL 48 (507)
Q Consensus 4 aav~G~vFaSP---s~~~i~~ai~~~~-~~~Gvl~iv~NY-------------------------------tGD~lnFg~ 48 (507)
-+..||||-|. .-.|+-+|++.+. .+.|||+....= ..|-=+||+
T Consensus 53 ec~tgDvfgs~rcdcg~qL~~Al~~I~~~G~GVlvyLrqegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygi 132 (196)
T 2bz1_A 53 ECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL 132 (196)
T ss_dssp CCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEEEEEECCHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHH
T ss_pred cCChHHHhCCCCCCChHHHHHHHHHHHHhCCEEEEEECCCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHH
Confidence 46789999997 4669999999987 466999887421 125568888
Q ss_pred HHHHHHhcCCc
Q 010541 49 AAEQAKSEGYK 59 (507)
Q Consensus 49 A~e~a~~~G~~ 59 (507)
+++..+.-|++
T Consensus 133 gAqIL~dLGV~ 143 (196)
T 2bz1_A 133 CADMFKLLGVN 143 (196)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 88888888875
No 14
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=50.30 E-value=25 Score=30.61 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=52.8
Q ss_pred CHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHHHHHh
Q 010541 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAG 94 (507)
Q Consensus 15 s~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~v~KiaG 94 (507)
...+|.++|+.++ +.|||+++== -|=.+|-.++.+..+ -+|+++ ..| +|.-..-
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggsp~N~~~al~~~~---~~v~vi------NlP---------------mvega~~ 98 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSARMNLDLVSEMTD---KELTIF------NVP---------------LIEGAYT 98 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGGHHHHHHHHHTCS---SEEEEC------CSC---------------HHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCChHHHHHHHHhcC---CCEEEE------Ehh---------------HHHHHHH
Confidence 4788999999988 6899887754 677788777776532 256554 222 3333222
Q ss_pred H--HHHcCCCHHHHHHHHHHHHhhhcc
Q 010541 95 A--AAAAGLSLADVAAEAKRASEMVGT 119 (507)
Q Consensus 95 A--~A~~G~~l~ev~~~~~~~~~~~~t 119 (507)
| .+..|.+++|+.+.+..+..+-||
T Consensus 99 aa~~~~~~~~l~el~~~~~~~~~~~~~ 125 (131)
T 3ct6_A 99 ASALLEAGATFEAIKEQLEKMLIEKRS 125 (131)
T ss_dssp HHHHHHTTCCHHHHHHHHGGGCCCCCC
T ss_pred HHHHhhcCCCHHHHHHHHHHHHhCccc
Confidence 2 356799999998888776555443
No 15
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=46.40 E-value=42 Score=32.87 Aligned_cols=94 Identities=17% Similarity=0.083 Sum_probs=60.9
Q ss_pred CCCCHHHHHHHHHhc-cCC-CCeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 010541 12 ASPPVDSILAGIHAV-TGP-MGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (507)
Q Consensus 12 aSPs~~~i~~ai~~~-~~~-~Gvl~iv~--NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v 87 (507)
+.||+.++.++.+.. ..+ ..||+|-- .-+|=.=|.-+|++ . ++.+|. +| | -+..-.|.-
T Consensus 66 Sqps~~~~~~~f~~l~~~gy~~ii~i~iSs~LSGTy~sA~~aa~-~--~~~~I~--Vi-D-----------S~~~s~g~g 128 (282)
T 2g7z_A 66 SQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAE-I--AEAPVT--VL-D-----------SGFTDQAMK 128 (282)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEEECCTTTCTHHHHHHHHHH-H--HTCCEE--EE-E-----------CSSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEECCCcHhHHHHHHHHHHh-C--CCCeEE--EE-C-----------CCchhHHHH
Confidence 358999999999766 333 45776642 23444444555554 2 222332 22 2 133345556
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccce
Q 010541 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (507)
Q Consensus 88 ~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gv 122 (507)
++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 ~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~f~ 163 (282)
T 2g7z_A 129 FQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIG 163 (282)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEE
Confidence 66667778899999999999999999998887643
No 16
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=42.95 E-value=48 Score=28.75 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=52.6
Q ss_pred CHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCccccchhhhHHHHH
Q 010541 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (507)
Q Consensus 15 s~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~-G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~v~Kia 93 (507)
...+|.++|+.++.+.|||+++== -|=.+|-.++.+....+ .-+|+++ ..| +|.+..
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp~N~~~~~~~~~~~~~~~v~vv------NlP---------------mv~~~l 107 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAVLSSELAFDMLEEDQQKHYHLV------DAP---------------LVEGAF 107 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHHHHHHHHHHHSCHHHHTTEEEC------CSC---------------HHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCChhHHHHHHHHhcccccCCEEEE------EHH---------------HHHHHH
Confidence 588999999999998999998765 66778877887765432 2256653 221 455544
Q ss_pred hH--HHHcCCCHHHHHHHHHHH
Q 010541 94 GA--AAAAGLSLADVAAEAKRA 113 (507)
Q Consensus 94 GA--~A~~G~~l~ev~~~~~~~ 113 (507)
-| .+..|.+++|+.+.+...
T Consensus 108 ~aa~~~~~~~~l~el~~~a~~~ 129 (135)
T 3b48_A 108 ASAITAGVSDDLTQILAEAQNA 129 (135)
T ss_dssp HHHHHHC-CCCHHHHHHHHHTC
T ss_pred HHHHHhhcCCCHHHHHHHHHHH
Confidence 43 345699999998877643
No 17
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=41.14 E-value=97 Score=30.83 Aligned_cols=94 Identities=12% Similarity=0.126 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHhcc-CCC-CeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 010541 12 ASPPVDSILAGIHAVT-GPM-GCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (507)
Q Consensus 12 aSPs~~~i~~ai~~~~-~~~-Gvl~iv~--NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v 87 (507)
+.||+.++.++.+... .+. .||+|-- .-+|=.=+.-+|+++. ..+ +.+|+- +.--.|.-
T Consensus 89 SqPs~~~~~e~f~~l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~---~~~--I~ViDS------------~~~s~g~g 151 (313)
T 1mgp_A 89 SQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEV---DIP--VYVVDT------------LLASGAIP 151 (313)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEEEESCTTTCSHHHHHHHHHHHS---SSC--EEEEEC------------SCCGGGTH
T ss_pred CCcCHHHHHHHHHHHHHcCCCeEEEEECCccHhHHHHHHHHHHhcC---CCe--EEEEeC------------CcchHHHH
Confidence 3589999999997653 332 5766642 2233333333444332 222 223322 22234555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHh--hhcccce
Q 010541 88 LVNKIAGAAAAAGLSLADVAAEAKRASE--MVGTMGV 122 (507)
Q Consensus 88 ~v~KiaGA~A~~G~~l~ev~~~~~~~~~--~~~t~gv 122 (507)
++..-|-.++++|+|++||.+..++..+ ++++.=+
T Consensus 152 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~~~f~ 188 (313)
T 1mgp_A 152 LPARVAREMLENGATIEEVLKKLDERMKNKDFKAIFY 188 (313)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhCceEEEEE
Confidence 6666677889999999999999999999 8776633
No 18
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=40.74 E-value=18 Score=30.33 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=35.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
..+-|..+|+++..+---++..+.+.|++++||.+.|+|+
T Consensus 57 a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI 96 (114)
T 3djh_A 57 ALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYI 96 (114)
T ss_dssp EEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 4566889999999777889999999999999999999997
No 19
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=40.43 E-value=25 Score=34.49 Aligned_cols=206 Identities=14% Similarity=0.002 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHh-cc-C-CCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhh
Q 010541 14 PPVDSILAGIHA-VT-G-PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (507)
Q Consensus 14 Ps~~~i~~ai~~-~~-~-~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~ 88 (507)
||+.++.+..+. .. + ...||+|- ..-+|=.=+.-+|+++.. +.+|. +| | -|.--.|.-+
T Consensus 45 ps~~~~~~~f~~~~~~~~~d~Ii~I~iSs~LSGTy~sA~~aa~~~~--~~~I~--Vi-D-----------S~~~s~g~g~ 108 (277)
T 3egl_A 45 LSSLELAASYARQLERGGDDGVLALHISXELSSTWSAAVTAAAVFD--DDSVR--VV-D-----------TSSLGMAVGA 108 (277)
T ss_dssp CCHHHHHHHHHHHHHHTTTSCEEEECSCTTTCSHHHHHHHHHTTSS--TTSEE--EE-C-----------CSCCTHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCcEEEEEeCcchhhhhHHHHHHHHhCC--CCCEE--EE-C-----------CCchhHHHHH
Confidence 999999999854 33 2 35687774 334554333334433211 22322 22 2 2333456666
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhccccee--ccccccCCC-CCCCCCCCCeeEEeccccCCCCc--ccccCCCH
Q 010541 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ-VTSDRLGPGKMELGLGIHGEPGA--AVADLQPV 163 (507)
Q Consensus 89 v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gva--l~~c~~Pg~-~~~~~l~~~e~E~G~GiHgEpG~--~~~~~~~a 163 (507)
+..-|-.++++|+|++||.+..++..+++++.=+- |..=.-=|+ .+.--+--+-+-|=-=+|=+-|. -..+..+.
T Consensus 109 ~v~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~dG~l~~~~KvRg~ 188 (277)
T 3egl_A 109 AAMAAARMAXDGASLQECYDIAVDTLXRSETWIYLHRIDEIWXSGRISTATAMVSTALATRPIMRFNGGRMEIAAXTRTQ 188 (277)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEECSCSHHHHHTTCSCTTTCSSGGGGCSSCEEEEETTEEEEEECCCSH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhceEEEEcCCHHHHhhCCccchHHHHHhhccceEEEEEEeCCEEEEEEecCCh
Confidence 66777889999999999999999999988776331 000000011 00000000000000001111242 23566777
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC--eEEEeeecccccccCCCc-
Q 010541 164 DVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL--AVERVYTGSFMTSLDMAG- 240 (507)
Q Consensus 164 ~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i--~v~r~~~G~~~TSldm~G- 240 (507)
+..+++|++.+.+. .. ..+..+.+.+. +. .|. +.++.+.|+++++. ++.-..+|+-+.+==.+|
T Consensus 189 kka~~~l~~~~~~~----~~--~~~~~i~i~h~-~~---~e~---a~~l~~~l~~~~~~~~~i~i~~ig~vIg~H~Gpg~ 255 (277)
T 3egl_A 189 SXAFAXLVELAQIR----AD--GEPVFIAIGQN-EA---REA---AXQLEELLRNALPEGSSFMSVDIDPTLAVHSGPGA 255 (277)
T ss_dssp HHHHHHHHHHHHHH----HT--TSCCEEEEEEE-SC---HHH---HHHHHHHHHHHSCTTCEEEEEECCHHHHHHHCTTE
T ss_pred hHHHHHHHHHHHHH----hC--CCCEEEEEEeC-CC---HHH---HHHHHHHHHHhcCCCceEEEEEEccEEEEEeCCCe
Confidence 78888888887653 21 22222333332 21 222 34455666666553 455556676665444444
Q ss_pred ceEEEeec
Q 010541 241 FSISIMKA 248 (507)
Q Consensus 241 fSiTll~l 248 (507)
+.|..++-
T Consensus 256 igi~~~~~ 263 (277)
T 3egl_A 256 VSVSAVFA 263 (277)
T ss_dssp EEEEEECS
T ss_pred EEEEEEEC
Confidence 56665543
No 20
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=40.30 E-value=1.2e+02 Score=30.28 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHhccC-CCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhh
Q 010541 12 ASPPVDSILAGIHAVTG-PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (507)
Q Consensus 12 aSPs~~~i~~ai~~~~~-~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v~ 88 (507)
+-||+.++.++.+.... ...||+|- ..-+|=.=+.-+|+++. .+. ++.+|+ -|.--.|.-+
T Consensus 96 SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~--~~~--~I~ViD------------S~~~s~g~g~ 159 (315)
T 3fys_A 96 SQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV--DNI--DVYPFD------------SEISCLAQGF 159 (315)
T ss_dssp ECCCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC--SSC--EEEEEE------------CSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC--CCC--CEEEEC------------CchhHHHHHH
Confidence 35899999999977643 45566664 23344332222332221 122 222332 1333455556
Q ss_pred HHHHHhHHHHcCC-CHHHHHHHHHHHHhhhccc
Q 010541 89 VNKIAGAAAAAGL-SLADVAAEAKRASEMVGTM 120 (507)
Q Consensus 89 v~KiaGA~A~~G~-~l~ev~~~~~~~~~~~~t~ 120 (507)
+..-|-.++++|. |++||.+..++..+++.+.
T Consensus 160 lv~~Aa~l~~~G~~s~eeI~~~l~~~~~~~~~~ 192 (315)
T 3fys_A 160 YALKAAELIKNGASSPEDIIKELEEMKKTVRAY 192 (315)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhccEEE
Confidence 6667778999999 9999999999999887765
No 21
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=38.59 E-value=23 Score=29.32 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=36.3
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
-+.+=|...|+.+..+.-.+++.+.+.|++.+|+.+.|+|+
T Consensus 57 ~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (112)
T 3b64_A 57 VACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFV 97 (112)
T ss_dssp CEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35566889999998888899999999999999999999987
No 22
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=37.66 E-value=24 Score=29.28 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=36.0
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
-+.+-|..+|+.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 1uiz_A 57 CAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYI 97 (115)
T ss_dssp CEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35566888999998888899999999999999999999887
No 23
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=37.15 E-value=18 Score=30.15 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=35.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
..+-|..+|+.+...---+...+.+.|++.+|+.+.|+|+
T Consensus 58 a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI 97 (114)
T 4dh4_A 58 AFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYT 97 (114)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 5566888999999777789999999999999999999997
No 24
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=36.77 E-value=22 Score=30.98 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=36.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010541 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (507)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G 230 (507)
+.+-|..+|+.+..+--.+++.+.+.|++.+||.+.|+|+=
T Consensus 79 a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 79 ACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp EEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 55668899999887778899999999999999999999983
No 25
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=36.46 E-value=92 Score=30.44 Aligned_cols=195 Identities=11% Similarity=0.068 Sum_probs=102.4
Q ss_pred CCCCHHHHHHHHHhccC-C-CCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 010541 12 ASPPVDSILAGIHAVTG-P-MGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (507)
Q Consensus 12 aSPs~~~i~~ai~~~~~-~-~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~RRG~aG~v 87 (507)
+.||+.++.++.+.... + ..||+|- ..-+|=.=+.-+|+|+. .+.+| .|=| -|..-.|.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~--~~~~I---~ViD-----------S~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEH--PNLTI---AFPD-----------TKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHC--TTSEE---ECCC-----------CCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhC--CCCCE---EEEc-----------CCchHHHHH
Confidence 45899999999976643 3 3566654 33444333333333321 12222 2222 234445666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceecc--cc--------------ccCCCCCCCCCC-CCeeEEecccc
Q 010541 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VC--------------TLPGQVTSDRLG-PGKMELGLGIH 150 (507)
Q Consensus 88 ~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~--~c--------------~~Pg~~~~~~l~-~~e~E~G~GiH 150 (507)
++..-|-.++++|+|++||.+..++..+++++.=+-=+ .= ++-.=+|-..+. +|+++
T Consensus 129 ~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~------ 202 (285)
T 3lup_A 129 NLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIV------ 202 (285)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTTCEEEEECSCTHHHHHHTCBTTHHHHHHHHTTSCCEEEECTTSCEE------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEEECChHHHhhCCCccHHHHHHHHhhCcEEEEEEccCceEE------
Confidence 66777778999999999999999999988877633100 00 000112333333 34333
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeee
Q 010541 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYT 229 (507)
Q Consensus 151 gEpG~~~~~~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~-i~v~r~~~ 229 (507)
-..+..+....++.|++.+.+. .. ....++ .+.+. + . .|. +.++.+.|++++. .++.-..+
T Consensus 203 -----~~~KvRg~kka~~~l~~~~~~~----~~-~~~~~v-~i~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~i 264 (285)
T 3lup_A 203 -----VYEKVRTEKKALKRLAEIVKEM----TA-DGEYDI-AIIHS-R-A--QDK---AEQLYNLLAKAGLKDDLEIVSF 264 (285)
T ss_dssp -----EEECCSSHHHHHHHHHHHHHHH----GG-GSCEEE-EEEES-S-C--HHH---HHHHHHHHHHTTCGGGEEEEEC
T ss_pred -----EeeecCCHHHHHHHHHHHHHHh----hc-CCCcEE-EEEeC-C-C--HHH---HHHHHHHHHhhCCCCeEEEEEE
Confidence 2355667777888888887653 22 112233 33332 2 2 232 2344555555533 24444556
Q ss_pred cccccccCCCc-ceEEEe
Q 010541 230 GSFMTSLDMAG-FSISIM 246 (507)
Q Consensus 230 G~~~TSldm~G-fSiTll 246 (507)
|+-+.+==.+| +.|..+
T Consensus 265 g~vig~H~Gpg~igi~~~ 282 (285)
T 3lup_A 265 GGVIATHLGEGAVAFGIT 282 (285)
T ss_dssp CHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEEecCCeEEEEEE
Confidence 66555433444 444443
No 26
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=35.08 E-value=24 Score=29.11 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=35.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
+.+=|..+|+.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 96 (113)
T 1hfo_A 57 AFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYI 96 (113)
T ss_dssp EEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEE
Confidence 5566888999998888899999999999999999999887
No 27
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=34.88 E-value=32 Score=28.79 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=36.7
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 188 ~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
+-+.+=|..+|+.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 56 ~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (119)
T 2os5_A 56 PVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVII 97 (119)
T ss_dssp SCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 345666888999998888899999999999999999999887
No 28
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=31.29 E-value=29 Score=28.80 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=35.9
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
-+.+=|..+|+.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 2xcz_A 57 TCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYI 97 (115)
T ss_dssp CEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 35556778999999999999999999999999999999887
No 29
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=30.85 E-value=22 Score=30.84 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=35.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010541 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (507)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G 230 (507)
+.+-|..+|+.+..+--.+++.+.+.|++.+||.+.|+|+=
T Consensus 79 a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 79 AYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp EEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 45557778888887778899999999999999999999973
No 30
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=29.19 E-value=21 Score=31.17 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=31.8
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
-+.+-|..+|+.+..+--.+++.+.+.|++.+||.+.|+|+
T Consensus 78 ~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI 118 (135)
T 3t5s_A 78 CCFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYI 118 (135)
T ss_dssp CEEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEE
Confidence 35566889999988888889999999999999999999997
No 31
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=27.66 E-value=29 Score=29.45 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=31.5
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010541 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (507)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~ 229 (507)
-+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (125)
T 2wkb_A 57 YCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYI 97 (125)
T ss_dssp CEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred cEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35566889999999888899999999999999999999887
No 32
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=27.05 E-value=1.7e+02 Score=24.62 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=39.8
Q ss_pred ceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEec
Q 010541 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVG 66 (507)
Q Consensus 3 ~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~ 66 (507)
|.+++..+ +...+++..++.+ +.|.|++......+ +.-..+..+..|.+++.+-+.
T Consensus 102 D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEee
Confidence 45556555 6788889988887 88888887744333 445677788889888887543
No 33
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=21.42 E-value=1.3e+02 Score=27.46 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHH----HHHHHHHhhhhhcCCeEEEeeeccccccc
Q 010541 161 QPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMI----AAGKAVPNLQLEHGLAVERVYTGSFMTSL 236 (507)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~----~~~~~~~~L~~~~~i~v~r~~~G~~~TSl 236 (507)
+-.+.+.+.+.+.|++- .+.+|+++- .+ ...|.+- -+|++++.|+.. |+-..+...|.|++.+
T Consensus 16 ~~~~~v~~~l~~~I~~g-----~l~pG~~L~--E~-----~La~~lgVSRtpVREAl~~L~~e-Glv~~~~~~G~~V~~~ 82 (222)
T 3ihu_A 16 SASDTVFFGIMSGLELG-----TFVPGQRLV--ET-----DLVAHFGVGRNSVREALQRLAAE-GIVDLQRHRGAVIRRL 82 (222)
T ss_dssp CHHHHHHHHHHHHHHHT-----SSCTTCEEC--HH-----HHHHHHTCCHHHHHHHHHHHHHT-TSEEECSTTCEEECCC
T ss_pred cHHHHHHHHHHHHHHhC-----CCCCCCccC--HH-----HHHHHHCCCHHHHHHHHHHHHHC-CCEEEecCCCeEEecC
Confidence 34566888888888873 578899842 11 1222222 579999999999 9988888899999876
Q ss_pred C
Q 010541 237 D 237 (507)
Q Consensus 237 d 237 (507)
+
T Consensus 83 ~ 83 (222)
T 3ihu_A 83 S 83 (222)
T ss_dssp C
T ss_pred C
Confidence 4
No 34
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.56 E-value=1.7e+02 Score=23.72 Aligned_cols=51 Identities=18% Similarity=0.341 Sum_probs=31.4
Q ss_pred ccCCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHH
Q 010541 149 IHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKA 212 (507)
Q Consensus 149 iHgEpG~~~~~~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~ 212 (507)
-|+=||.......+..++ +.+++.+. +.|...+|+||+ .|+-..+-+-+++
T Consensus 23 khnypgryirtatssqdi-rdiiksmk---------dngkplvvfvng---asqndvnefqnea 73 (112)
T 2lnd_A 23 KHNYPGRYIRTATSSQDI-RDIIKSMK---------DNGKPLVVFVNG---ASQNDVNEFQNEA 73 (112)
T ss_dssp HHHSCTTTEEEECSHHHH-HHHHHHHT---------TCCSCEEEEECS---CCHHHHHHHHHHH
T ss_pred hcCCCCceeeeccchhhH-HHHHHHHH---------hcCCeEEEEecC---cccccHHHHHHHH
Confidence 388899765555555554 33333332 357889999998 5665555444444
Done!