Query 010542
Match_columns 507
No_of_seqs 185 out of 2249
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 09:03:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010542.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010542hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s3e_A Amine oxidase [flavin-c 100.0 2.2E-46 7.4E-51 386.3 34.4 439 27-503 3-478 (520)
2 2yg5_A Putrescine oxidase; oxi 100.0 2.7E-44 9.2E-49 364.9 32.7 419 27-478 4-451 (453)
3 4gut_A Lysine-specific histone 100.0 2.2E-42 7.7E-47 365.5 41.9 421 26-476 334-775 (776)
4 2z3y_A Lysine-specific histone 100.0 5.4E-42 1.8E-46 361.0 44.6 447 26-478 105-658 (662)
5 2vvm_A Monoamine oxidase N; FA 100.0 2.5E-43 8.7E-48 361.6 33.2 408 28-478 39-485 (495)
6 2xag_A Lysine-specific histone 100.0 6.5E-42 2.2E-46 363.8 43.1 447 26-480 276-831 (852)
7 1rsg_A FMS1 protein; FAD bindi 100.0 6.8E-43 2.3E-47 359.5 34.6 425 27-481 7-510 (516)
8 1b37_A Protein (polyamine oxid 100.0 9.4E-41 3.2E-45 340.0 43.3 424 27-480 3-460 (472)
9 2iid_A L-amino-acid oxidase; f 100.0 2.3E-40 7.9E-45 339.8 33.0 431 26-479 31-485 (498)
10 3k7m_X 6-hydroxy-L-nicotine ox 100.0 5.5E-40 1.9E-44 331.0 32.6 402 28-477 1-425 (431)
11 3i6d_A Protoporphyrinogen oxid 100.0 1.4E-39 4.7E-44 332.0 26.4 406 27-478 4-468 (470)
12 2jae_A L-amino acid oxidase; o 100.0 1.2E-38 4.2E-43 326.3 31.0 424 25-481 8-488 (489)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 5.8E-39 2E-43 327.9 26.3 409 25-479 13-474 (478)
14 3lov_A Protoporphyrinogen oxid 100.0 1.2E-37 4E-42 317.9 25.6 410 27-479 3-466 (475)
15 1sez_A Protoporphyrinogen oxid 100.0 2E-37 6.8E-42 318.6 25.8 414 26-478 11-493 (504)
16 3ka7_A Oxidoreductase; structu 100.0 3.6E-36 1.2E-40 302.6 27.7 403 29-475 1-424 (425)
17 3nks_A Protoporphyrinogen oxid 100.0 4.2E-37 1.5E-41 314.1 19.5 404 28-476 2-472 (477)
18 4dgk_A Phytoene dehydrogenase; 100.0 2.1E-35 7.2E-40 303.4 24.9 428 28-480 1-493 (501)
19 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.1E-34 3.8E-39 282.9 26.8 228 238-477 105-341 (342)
20 3ayj_A Pro-enzyme of L-phenyla 100.0 4.2E-35 1.4E-39 303.0 24.8 243 236-480 338-681 (721)
21 4gde_A UDP-galactopyranose mut 100.0 4.8E-35 1.6E-39 301.8 24.6 402 26-476 8-477 (513)
22 3nrn_A Uncharacterized protein 100.0 5.2E-34 1.8E-38 286.3 25.9 387 29-474 1-403 (421)
23 4dsg_A UDP-galactopyranose mut 100.0 1.7E-32 5.7E-37 278.6 25.0 402 26-475 7-452 (484)
24 2b9w_A Putative aminooxidase; 100.0 1.1E-30 3.7E-35 262.5 23.8 392 26-475 4-423 (424)
25 1yvv_A Amine oxidase, flavin-c 100.0 5.9E-27 2E-31 227.8 31.4 321 28-478 2-327 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 1.3E-26 4.5E-31 229.6 13.4 253 26-335 5-274 (399)
27 1i8t_A UDP-galactopyranose mut 99.9 2.6E-25 8.8E-30 217.7 18.1 251 28-337 1-262 (367)
28 2bi7_A UDP-galactopyranose mut 99.9 6.6E-25 2.3E-29 216.0 16.3 242 28-332 3-260 (384)
29 3hdq_A UDP-galactopyranose mut 99.9 7.8E-23 2.7E-27 199.7 21.2 252 25-338 26-291 (397)
30 2bcg_G Secretory pathway GDP d 99.9 8.7E-21 3E-25 191.2 21.6 244 25-295 8-299 (453)
31 3kkj_A Amine oxidase, flavin-c 99.8 6.9E-18 2.3E-22 159.6 28.8 59 27-85 1-59 (336)
32 1d5t_A Guanine nucleotide diss 99.8 8.1E-19 2.8E-23 175.6 17.5 243 25-296 3-290 (433)
33 3p1w_A Rabgdi protein; GDI RAB 99.8 7.1E-19 2.4E-23 175.0 14.8 245 25-295 17-313 (475)
34 2e1m_A L-glutamate oxidase; L- 99.8 4.2E-18 1.4E-22 164.9 17.7 79 26-106 42-131 (376)
35 2e1m_C L-glutamate oxidase; L- 99.6 3.6E-16 1.2E-20 135.6 9.0 116 362-479 33-153 (181)
36 3dme_A Conserved exported prot 99.5 8.3E-13 2.8E-17 129.3 19.9 41 27-67 3-43 (369)
37 3nyc_A D-arginine dehydrogenas 99.5 6.3E-13 2.1E-17 130.9 16.4 51 245-296 158-209 (381)
38 3ps9_A TRNA 5-methylaminomethy 99.5 5E-12 1.7E-16 133.7 23.8 52 245-296 421-473 (676)
39 3oz2_A Digeranylgeranylglycero 99.5 3.8E-12 1.3E-16 125.8 20.4 39 27-65 3-41 (397)
40 3pvc_A TRNA 5-methylaminomethy 99.4 7.5E-12 2.5E-16 132.5 20.8 52 245-296 416-469 (689)
41 1vg0_A RAB proteins geranylger 99.4 1.9E-12 6.3E-17 132.6 15.5 57 235-291 368-432 (650)
42 1y56_B Sarcosine oxidase; dehy 99.4 2E-11 6.9E-16 120.2 20.6 50 246-296 154-205 (382)
43 1ryi_A Glycine oxidase; flavop 99.4 1.6E-11 5.3E-16 120.9 18.5 51 245-296 168-219 (382)
44 3rp8_A Flavoprotein monooxygen 99.4 3.1E-11 1.1E-15 119.8 20.1 49 247-296 133-181 (407)
45 2gf3_A MSOX, monomeric sarcosi 99.4 3E-11 1E-15 119.2 19.7 51 245-296 154-205 (389)
46 3i3l_A Alkylhalidase CMLS; fla 99.3 1.1E-11 3.8E-16 128.0 16.2 38 27-64 22-59 (591)
47 2oln_A NIKD protein; flavoprot 99.3 1.7E-10 5.9E-15 114.0 24.4 51 244-295 156-207 (397)
48 3fmw_A Oxygenase; mithramycin, 99.3 7.6E-11 2.6E-15 121.5 20.6 43 254-296 162-207 (570)
49 3dje_A Fructosyl amine: oxygen 99.3 1.3E-11 4.4E-16 123.9 14.1 53 245-297 165-222 (438)
50 3v76_A Flavoprotein; structura 99.3 8.1E-12 2.8E-16 123.6 11.8 43 25-67 24-66 (417)
51 3cgv_A Geranylgeranyl reductas 99.3 2E-10 6.8E-15 113.6 21.3 39 27-65 3-41 (397)
52 3ihg_A RDME; flavoenzyme, anth 99.3 9.6E-11 3.3E-15 120.6 19.6 50 247-296 126-183 (535)
53 3nix_A Flavoprotein/dehydrogen 99.3 1.6E-10 5.5E-15 115.2 18.4 43 254-296 120-166 (421)
54 4hb9_A Similarities with proba 99.2 2.6E-10 8.9E-15 113.2 18.7 51 247-297 114-167 (412)
55 2qa1_A PGAE, polyketide oxygen 99.2 8.9E-10 3E-14 111.9 22.4 43 254-296 120-165 (500)
56 2qa2_A CABE, polyketide oxygen 99.2 3E-10 1E-14 115.4 18.4 43 254-296 121-166 (499)
57 3e1t_A Halogenase; flavoprotei 99.2 2.6E-10 8.8E-15 116.6 15.5 36 27-62 6-41 (512)
58 4ap3_A Steroid monooxygenase; 99.2 9.8E-11 3.4E-15 120.1 12.2 56 26-81 19-74 (549)
59 4at0_A 3-ketosteroid-delta4-5a 99.2 3.7E-10 1.3E-14 115.2 16.0 42 26-67 39-80 (510)
60 3da1_A Glycerol-3-phosphate de 99.2 1.6E-10 5.5E-15 119.0 13.3 41 27-67 17-57 (561)
61 2uzz_A N-methyl-L-tryptophan o 99.2 2.1E-10 7E-15 112.4 13.4 51 245-296 153-204 (372)
62 2vou_A 2,6-dihydroxypyridine h 99.2 2.9E-10 9.9E-15 112.4 14.5 45 253-297 110-154 (397)
63 1qo8_A Flavocytochrome C3 fuma 99.2 2.3E-10 7.8E-15 118.4 14.1 42 26-67 119-160 (566)
64 3atr_A Conserved archaeal prot 99.2 5.2E-10 1.8E-14 112.6 16.3 37 27-63 5-41 (453)
65 1y0p_A Fumarate reductase flav 99.2 3E-10 1E-14 117.7 14.8 42 26-67 124-165 (571)
66 2gqf_A Hypothetical protein HI 99.1 1.5E-10 5E-15 114.2 11.3 41 27-67 3-43 (401)
67 1w4x_A Phenylacetone monooxyge 99.1 2.4E-10 8.2E-15 117.5 12.8 50 26-75 14-63 (542)
68 2xdo_A TETX2 protein; tetracyc 99.1 6.5E-10 2.2E-14 109.9 15.3 44 254-297 140-183 (398)
69 2i0z_A NAD(FAD)-utilizing dehy 99.1 1.8E-10 6.1E-15 115.6 11.0 42 26-67 24-65 (447)
70 3gwf_A Cyclohexanone monooxyge 99.1 2.5E-10 8.4E-15 116.9 11.9 53 27-79 7-60 (540)
71 2zbw_A Thioredoxin reductase; 99.1 3.8E-10 1.3E-14 108.8 11.6 41 27-67 4-44 (335)
72 2qcu_A Aerobic glycerol-3-phos 99.1 1.4E-08 4.6E-13 103.4 23.4 39 27-65 2-40 (501)
73 2gag_B Heterotetrameric sarcos 99.1 6.4E-10 2.2E-14 110.2 13.1 51 245-296 178-230 (405)
74 3uox_A Otemo; baeyer-villiger 99.1 2.4E-10 8.3E-15 117.0 9.7 51 26-76 7-57 (545)
75 3nlc_A Uncharacterized protein 99.1 4.4E-10 1.5E-14 114.3 11.4 42 26-67 105-146 (549)
76 3ab1_A Ferredoxin--NADP reduct 99.1 6.5E-10 2.2E-14 108.3 11.9 43 26-68 12-54 (360)
77 4a9w_A Monooxygenase; baeyer-v 99.1 6.7E-10 2.3E-14 107.9 11.3 41 28-68 3-43 (357)
78 2gmh_A Electron transfer flavo 99.0 1.4E-08 4.6E-13 105.1 21.2 41 26-66 33-79 (584)
79 3lzw_A Ferredoxin--NADP reduct 99.0 5.4E-10 1.8E-14 107.5 9.7 41 27-67 6-46 (332)
80 2x3n_A Probable FAD-dependent 99.0 7.7E-10 2.6E-14 109.4 10.1 51 246-296 112-166 (399)
81 3f8d_A Thioredoxin reductase ( 99.0 1.8E-09 6.1E-14 103.3 12.2 41 254-295 84-124 (323)
82 2gv8_A Monooxygenase; FMO, FAD 99.0 3E-09 1E-13 106.7 14.0 42 26-67 4-47 (447)
83 1pj5_A N,N-dimethylglycine oxi 99.0 7.9E-10 2.7E-14 119.6 9.9 51 245-296 155-207 (830)
84 2dkh_A 3-hydroxybenzoate hydro 99.0 1.2E-08 3.9E-13 107.0 18.5 37 27-63 31-68 (639)
85 1rp0_A ARA6, thiazole biosynth 99.0 1.5E-09 5E-14 102.0 10.2 41 27-67 38-79 (284)
86 3o0h_A Glutathione reductase; 99.0 7E-09 2.4E-13 105.1 15.9 49 247-295 238-287 (484)
87 1d4d_A Flavocytochrome C fumar 99.0 3.1E-09 1.1E-13 109.8 12.6 42 26-67 124-165 (572)
88 3axb_A Putative oxidoreductase 99.0 9.9E-10 3.4E-14 110.4 8.5 39 27-65 22-61 (448)
89 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.5E-09 8.6E-14 104.9 10.0 39 27-65 10-48 (379)
90 2e1m_B L-glutamate oxidase; L- 98.9 5.7E-11 1.9E-15 95.2 -1.6 108 281-403 4-112 (130)
91 3c96_A Flavin-containing monoo 98.9 5.5E-09 1.9E-13 103.7 11.8 38 27-64 3-41 (410)
92 3itj_A Thioredoxin reductase 1 98.9 2.4E-09 8.2E-14 103.2 8.9 43 25-67 19-65 (338)
93 4fk1_A Putative thioredoxin re 98.9 8.2E-09 2.8E-13 97.9 11.3 40 26-66 4-43 (304)
94 3jsk_A Cypbp37 protein; octame 98.9 8.1E-09 2.8E-13 97.8 10.4 41 27-67 78-120 (344)
95 2h88_A Succinate dehydrogenase 98.9 4.7E-08 1.6E-12 101.2 16.8 40 27-66 17-56 (621)
96 2wdq_A Succinate dehydrogenase 98.9 5E-08 1.7E-12 100.8 16.9 40 27-66 6-45 (588)
97 2rgh_A Alpha-glycerophosphate 98.8 2.4E-08 8.1E-13 103.0 14.0 39 27-65 31-69 (571)
98 1k0i_A P-hydroxybenzoate hydro 98.8 1E-08 3.4E-13 101.2 10.7 51 247-297 109-164 (394)
99 2q0l_A TRXR, thioredoxin reduc 98.8 1.7E-08 5.8E-13 96.0 11.9 39 28-67 1-40 (311)
100 3d1c_A Flavin-containing putat 98.8 8.2E-09 2.8E-13 100.8 9.7 42 254-296 102-143 (369)
101 2bs2_A Quinol-fumarate reducta 98.8 5.9E-08 2E-12 101.2 16.5 40 27-66 4-43 (660)
102 2r0c_A REBC; flavin adenine di 98.8 8.9E-09 3E-13 106.0 9.8 39 27-65 25-63 (549)
103 2xve_A Flavin-containing monoo 98.8 3.9E-08 1.3E-12 99.0 13.8 42 28-69 2-49 (464)
104 2bry_A NEDD9 interacting prote 98.8 1.1E-08 3.9E-13 103.7 9.9 40 26-65 90-129 (497)
105 2gjc_A Thiazole biosynthetic e 98.8 1.7E-08 5.8E-13 95.1 10.2 40 28-67 65-106 (326)
106 1chu_A Protein (L-aspartate ox 98.8 3.2E-08 1.1E-12 101.2 13.1 39 27-66 7-45 (540)
107 2cul_A Glucose-inhibited divis 98.8 2.9E-08 1E-12 90.0 11.2 35 27-61 2-36 (232)
108 3fbs_A Oxidoreductase; structu 98.8 3.6E-08 1.2E-12 93.0 12.2 35 28-62 2-36 (297)
109 3fpz_A Thiazole biosynthetic e 98.8 2.7E-09 9.3E-14 102.4 4.1 69 27-105 64-134 (326)
110 2q7v_A Thioredoxin reductase; 98.8 2.9E-08 9.9E-13 95.1 11.2 40 27-67 7-46 (325)
111 2ywl_A Thioredoxin reductase r 98.8 3.4E-08 1.2E-12 85.7 10.5 41 253-295 69-109 (180)
112 2e5v_A L-aspartate oxidase; ar 98.7 9.2E-08 3.2E-12 96.3 13.5 36 30-66 1-36 (472)
113 1pn0_A Phenol 2-monooxygenase; 98.7 2.3E-07 7.7E-12 97.4 16.7 35 28-62 8-47 (665)
114 1trb_A Thioredoxin reductase; 98.7 3.3E-08 1.1E-12 94.4 9.4 41 26-67 3-43 (320)
115 1kf6_A Fumarate reductase flav 98.7 1.8E-07 6.1E-12 96.9 15.3 39 28-66 5-45 (602)
116 1dxl_A Dihydrolipoamide dehydr 98.7 1.2E-07 4E-12 95.8 13.5 42 26-67 4-45 (470)
117 3oc4_A Oxidoreductase, pyridin 98.7 3.9E-08 1.3E-12 98.7 9.7 49 246-295 194-243 (452)
118 2a87_A TRXR, TR, thioredoxin r 98.7 5.3E-08 1.8E-12 93.7 10.3 41 26-67 12-52 (335)
119 1vdc_A NTR, NADPH dependent th 98.7 3.3E-08 1.1E-12 95.0 8.8 40 254-295 84-123 (333)
120 3ics_A Coenzyme A-disulfide re 98.7 5.5E-08 1.9E-12 101.1 10.3 39 26-64 34-74 (588)
121 3lxd_A FAD-dependent pyridine 98.7 2.2E-07 7.6E-12 92.1 14.1 48 248-295 201-250 (415)
122 1ojt_A Surface protein; redox- 98.7 8.5E-08 2.9E-12 97.1 11.1 41 27-67 5-45 (482)
123 3s5w_A L-ornithine 5-monooxyge 98.7 1.2E-07 4.1E-12 95.6 12.0 39 27-65 29-72 (463)
124 1fl2_A Alkyl hydroperoxide red 98.7 7.8E-08 2.7E-12 91.4 10.1 42 254-295 70-114 (310)
125 2zxi_A TRNA uridine 5-carboxym 98.7 2.9E-08 9.8E-13 101.4 7.4 39 27-65 26-65 (637)
126 2weu_A Tryptophan 5-halogenase 98.7 9.3E-08 3.2E-12 97.7 11.3 42 254-296 187-230 (511)
127 3ces_A MNMG, tRNA uridine 5-ca 98.6 3.2E-08 1.1E-12 101.5 7.6 38 27-64 27-65 (651)
128 4gcm_A TRXR, thioredoxin reduc 98.6 1.7E-08 5.8E-13 96.1 5.1 40 27-67 5-44 (312)
129 2e4g_A Tryptophan halogenase; 98.6 2E-07 6.7E-12 96.0 12.4 50 246-296 199-252 (550)
130 1hyu_A AHPF, alkyl hydroperoxi 98.6 1.7E-07 5.9E-12 95.6 11.2 40 26-67 210-249 (521)
131 3cp8_A TRNA uridine 5-carboxym 98.6 1.3E-07 4.4E-12 97.0 9.7 40 26-65 19-59 (641)
132 1jnr_A Adenylylsulfate reducta 98.6 1.4E-06 4.9E-11 91.0 17.5 36 27-62 21-60 (643)
133 4a5l_A Thioredoxin reductase; 98.6 3.2E-08 1.1E-12 94.3 4.2 39 26-65 2-40 (314)
134 1c0p_A D-amino acid oxidase; a 98.5 1.2E-07 4.2E-12 92.2 6.5 40 26-65 4-43 (363)
135 3klj_A NAD(FAD)-dependent dehy 98.5 4.3E-07 1.5E-11 88.8 10.3 38 26-63 7-44 (385)
136 3iwa_A FAD-dependent pyridine 98.5 2.7E-07 9.3E-12 93.2 8.8 37 28-64 3-41 (472)
137 3urh_A Dihydrolipoyl dehydroge 98.4 1E-07 3.5E-12 96.8 4.7 42 26-67 23-64 (491)
138 3h8l_A NADH oxidase; membrane 98.4 6.2E-07 2.1E-11 88.8 10.0 35 28-62 1-38 (409)
139 3ntd_A FAD-dependent pyridine 98.4 6.5E-07 2.2E-11 92.6 9.8 37 28-64 1-39 (565)
140 3l8k_A Dihydrolipoyl dehydroge 98.4 1.1E-07 3.6E-12 96.0 3.6 42 27-68 3-44 (466)
141 3cty_A Thioredoxin reductase; 98.4 1.6E-07 5.5E-12 89.6 4.7 42 25-67 13-54 (319)
142 3qfa_A Thioredoxin reductase 1 98.4 2.5E-07 8.4E-12 94.5 5.3 43 25-67 29-79 (519)
143 2vdc_G Glutamate synthase [NAD 98.4 3E-07 1E-11 91.9 5.7 42 26-67 120-161 (456)
144 4dna_A Probable glutathione re 98.4 2.1E-07 7.1E-12 93.7 4.5 40 27-67 4-43 (463)
145 1mo9_A ORF3; nucleotide bindin 98.4 2.8E-07 9.5E-12 94.2 5.5 44 25-68 40-83 (523)
146 3k30_A Histamine dehydrogenase 98.3 4.1E-07 1.4E-11 96.2 6.3 45 25-69 388-432 (690)
147 2qae_A Lipoamide, dihydrolipoy 98.3 2.9E-07 1E-11 92.8 4.7 41 28-68 2-42 (468)
148 3g3e_A D-amino-acid oxidase; F 98.3 2.4E-07 8.1E-12 89.7 3.8 37 29-65 1-43 (351)
149 3r9u_A Thioredoxin reductase; 98.3 2.6E-07 9.1E-12 87.8 3.8 41 27-68 3-44 (315)
150 3lad_A Dihydrolipoamide dehydr 98.3 3.8E-07 1.3E-11 92.2 5.0 41 27-67 2-42 (476)
151 3ihm_A Styrene monooxygenase A 98.3 4.1E-07 1.4E-11 90.6 5.1 36 26-61 20-55 (430)
152 3c4n_A Uncharacterized protein 98.3 3.7E-07 1.3E-11 90.2 4.3 39 27-65 35-75 (405)
153 4b63_A L-ornithine N5 monooxyg 98.3 1.3E-06 4.4E-11 88.6 8.2 41 25-65 36-76 (501)
154 1zk7_A HGII, reductase, mercur 98.3 6E-07 2.1E-11 90.5 5.5 41 26-67 2-42 (467)
155 3dk9_A Grase, GR, glutathione 98.3 3.6E-07 1.2E-11 92.5 3.6 41 26-67 18-58 (478)
156 1zmd_A Dihydrolipoyl dehydroge 98.2 4.2E-07 1.4E-11 91.8 3.9 41 27-67 5-45 (474)
157 2r9z_A Glutathione amide reduc 98.2 5.6E-07 1.9E-11 90.5 4.7 50 246-295 212-263 (463)
158 1v59_A Dihydrolipoamide dehydr 98.2 3.5E-07 1.2E-11 92.6 2.9 41 27-67 4-44 (478)
159 2yqu_A 2-oxoglutarate dehydrog 98.2 5.9E-07 2E-11 90.2 4.5 41 28-68 1-41 (455)
160 1ges_A Glutathione reductase; 98.2 5.2E-07 1.8E-11 90.4 4.0 40 27-67 3-42 (450)
161 3dgz_A Thioredoxin reductase 2 98.2 6.2E-07 2.1E-11 90.9 4.4 42 26-67 4-53 (488)
162 1o94_A Tmadh, trimethylamine d 98.2 1E-06 3.6E-11 93.5 6.1 44 26-69 387-430 (729)
163 3c4a_A Probable tryptophan hyd 98.2 1.1E-06 3.6E-11 86.2 5.7 35 29-63 1-37 (381)
164 2hqm_A GR, grase, glutathione 98.2 7.3E-07 2.5E-11 90.1 4.0 41 27-68 10-50 (479)
165 1fec_A Trypanothione reductase 98.2 8.2E-07 2.8E-11 90.0 4.2 49 247-295 237-287 (490)
166 1xdi_A RV3303C-LPDA; reductase 98.2 6.7E-07 2.3E-11 90.9 3.5 50 246-295 228-278 (499)
167 2wpf_A Trypanothione reductase 98.2 6.7E-07 2.3E-11 90.7 3.1 50 246-295 240-291 (495)
168 3ic9_A Dihydrolipoamide dehydr 98.2 1E-06 3.5E-11 89.3 4.5 39 28-67 8-46 (492)
169 1lvl_A Dihydrolipoamide dehydr 98.1 8.1E-07 2.8E-11 89.2 3.4 41 27-68 4-44 (458)
170 3pl8_A Pyranose 2-oxidase; sub 98.1 1.6E-06 5.4E-11 90.1 5.4 41 27-67 45-85 (623)
171 1onf_A GR, grase, glutathione 98.1 1.2E-06 4.1E-11 89.0 4.4 39 28-67 2-40 (500)
172 1ebd_A E3BD, dihydrolipoamide 98.1 1.1E-06 3.7E-11 88.3 4.0 39 28-67 3-41 (455)
173 2v3a_A Rubredoxin reductase; a 98.1 2E-05 6.8E-10 77.1 12.9 43 253-295 200-242 (384)
174 3dgh_A TRXR-1, thioredoxin red 98.1 1.5E-06 5.1E-11 88.0 4.9 34 26-59 7-40 (483)
175 2a8x_A Dihydrolipoyl dehydroge 98.1 1E-06 3.6E-11 88.6 3.5 39 28-67 3-41 (464)
176 2aqj_A Tryptophan halogenase, 98.1 2.7E-06 9.3E-11 87.3 6.1 44 253-297 178-223 (538)
177 3g5s_A Methylenetetrahydrofola 98.1 2.5E-06 8.5E-11 81.3 5.2 40 28-67 1-40 (443)
178 2yqu_A 2-oxoglutarate dehydrog 98.1 2.4E-05 8.3E-10 78.4 12.3 44 253-296 221-264 (455)
179 1ps9_A 2,4-dienoyl-COA reducta 98.1 3.6E-06 1.2E-10 88.7 6.3 42 26-67 371-412 (671)
180 2eq6_A Pyruvate dehydrogenase 98.0 2.7E-06 9.2E-11 85.6 4.3 39 28-67 6-44 (464)
181 1ju2_A HydroxynitrIle lyase; f 98.0 2.3E-06 8E-11 87.4 3.7 60 4-64 2-61 (536)
182 2pyx_A Tryptophan halogenase; 98.0 4.9E-06 1.7E-10 85.1 5.8 49 247-296 181-233 (526)
183 1lqt_A FPRA; NADP+ derivative, 98.0 3.3E-06 1.1E-10 84.4 4.0 42 27-68 2-50 (456)
184 3h28_A Sulfide-quinone reducta 98.0 4.2E-06 1.4E-10 83.3 4.6 39 28-66 2-42 (430)
185 3gyx_A Adenylylsulfate reducta 98.0 3.5E-06 1.2E-10 87.8 4.2 38 27-64 21-64 (662)
186 1gte_A Dihydropyrimidine dehyd 98.0 4.3E-06 1.5E-10 92.1 5.1 41 27-67 186-227 (1025)
187 3kd9_A Coenzyme A disulfide re 98.0 5.5E-06 1.9E-10 82.9 5.3 39 28-66 3-43 (449)
188 2eq6_A Pyruvate dehydrogenase 97.9 6E-05 2E-09 75.7 12.4 43 253-295 223-270 (464)
189 1ges_A Glutathione reductase; 97.9 7E-05 2.4E-09 74.8 12.8 43 253-295 221-264 (450)
190 3ef6_A Toluene 1,2-dioxygenase 97.9 5.6E-05 1.9E-09 74.5 11.9 44 253-296 198-241 (410)
191 2gag_A Heterotetrameric sarcos 97.9 5.3E-06 1.8E-10 90.7 4.8 41 28-68 128-168 (965)
192 2r9z_A Glutathione amide reduc 97.9 7.9E-05 2.7E-09 74.7 13.0 36 28-63 166-201 (463)
193 1y56_A Hypothetical protein PH 97.9 3.3E-06 1.1E-10 85.5 2.9 40 28-68 108-147 (493)
194 1cjc_A Protein (adrenodoxin re 97.9 8E-06 2.7E-10 81.7 4.9 42 27-68 5-48 (460)
195 4b1b_A TRXR, thioredoxin reduc 97.9 6.5E-06 2.2E-10 83.8 4.3 48 247-294 269-317 (542)
196 3fg2_P Putative rubredoxin red 97.9 1E-05 3.4E-10 79.8 5.6 49 247-295 190-240 (404)
197 2x8g_A Thioredoxin glutathione 97.9 8.7E-06 3E-10 84.6 5.2 34 26-59 105-138 (598)
198 3fg2_P Putative rubredoxin red 97.9 9.9E-05 3.4E-09 72.6 12.4 36 28-63 142-177 (404)
199 3ef6_A Toluene 1,2-dioxygenase 97.9 1.2E-05 4.2E-10 79.3 5.8 41 253-295 70-110 (410)
200 3cgb_A Pyridine nucleotide-dis 97.9 1E-05 3.5E-10 81.6 5.1 38 28-65 36-75 (480)
201 1q1r_A Putidaredoxin reductase 97.8 1.5E-05 5.3E-10 79.1 6.0 49 247-295 197-249 (431)
202 1q1r_A Putidaredoxin reductase 97.8 0.00013 4.5E-09 72.4 12.6 37 27-63 148-184 (431)
203 1ebd_A E3BD, dihydrolipoamide 97.8 0.00011 3.7E-09 73.6 12.0 36 28-63 170-205 (455)
204 2cdu_A NADPH oxidase; flavoenz 97.8 1.4E-05 4.7E-10 80.1 5.2 37 29-65 1-39 (452)
205 1nhp_A NADH peroxidase; oxidor 97.8 0.0001 3.6E-09 73.5 11.2 37 27-63 148-184 (447)
206 3q9t_A Choline dehydrogenase a 97.8 2E-05 6.9E-10 80.8 6.1 37 26-62 4-41 (577)
207 1nhp_A NADH peroxidase; oxidor 97.8 1.6E-05 5.3E-10 79.6 5.2 36 29-64 1-38 (447)
208 3t37_A Probable dehydrogenase; 97.8 1.2E-05 4.2E-10 82.2 4.4 37 25-61 14-51 (526)
209 3sx6_A Sulfide-quinone reducta 97.8 1.4E-05 4.9E-10 79.6 4.7 37 27-63 3-42 (437)
210 2v3a_A Rubredoxin reductase; a 97.8 1.7E-05 6E-10 77.5 5.1 35 27-61 3-39 (384)
211 2gqw_A Ferredoxin reductase; f 97.8 0.00019 6.6E-09 70.6 12.5 37 27-63 144-180 (408)
212 2bc0_A NADH oxidase; flavoprot 97.8 1.7E-05 5.9E-10 80.2 4.9 39 27-65 34-75 (490)
213 2hqm_A GR, grase, glutathione 97.8 0.0002 6.8E-09 72.2 12.6 43 253-295 239-284 (479)
214 3ic9_A Dihydrolipoamide dehydr 97.7 0.00022 7.5E-09 72.1 13.0 45 251-295 225-273 (492)
215 1kdg_A CDH, cellobiose dehydro 97.7 1.8E-05 6.1E-10 81.3 4.9 38 26-63 5-42 (546)
216 1xdi_A RV3303C-LPDA; reductase 97.7 0.00019 6.5E-09 72.7 12.5 36 28-63 182-217 (499)
217 1m6i_A Programmed cell death p 97.7 1.7E-05 5.7E-10 80.3 4.6 50 247-296 232-282 (493)
218 2gqw_A Ferredoxin reductase; f 97.7 1.9E-05 6.5E-10 77.9 4.9 38 27-64 6-45 (408)
219 1v59_A Dihydrolipoamide dehydr 97.7 0.00015 5.1E-09 73.1 11.6 36 28-63 183-218 (478)
220 3iwa_A FAD-dependent pyridine 97.7 0.00021 7.2E-09 71.9 12.1 43 253-295 215-257 (472)
221 4g6h_A Rotenone-insensitive NA 97.7 2.7E-05 9.3E-10 78.8 5.4 38 25-62 39-76 (502)
222 1mo9_A ORF3; nucleotide bindin 97.7 0.00023 8E-09 72.5 12.2 43 253-295 268-315 (523)
223 1onf_A GR, grase, glutathione 97.7 0.00029 9.8E-09 71.4 12.8 43 253-295 230-274 (500)
224 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00026 9.1E-09 71.2 12.2 36 28-63 178-213 (474)
225 1ojt_A Surface protein; redox- 97.7 0.00017 5.7E-09 72.8 10.6 43 253-295 239-285 (482)
226 1xhc_A NADH oxidase /nitrite r 97.7 3.1E-05 1.1E-09 75.1 5.0 35 28-63 8-42 (367)
227 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00036 1.2E-08 70.0 12.9 43 253-295 225-270 (464)
228 3qvp_A Glucose oxidase; oxidor 97.7 3.5E-05 1.2E-09 79.0 5.5 36 26-61 17-53 (583)
229 2cdu_A NADPH oxidase; flavoenz 97.7 0.00032 1.1E-08 70.1 12.4 35 28-62 149-183 (452)
230 1n4w_A CHOD, cholesterol oxida 97.7 3.1E-05 1.1E-09 78.5 5.0 39 26-64 3-41 (504)
231 2qae_A Lipoamide, dihydrolipoy 97.6 0.00038 1.3E-08 69.9 12.8 44 253-296 229-276 (468)
232 1lvl_A Dihydrolipoamide dehydr 97.6 0.00015 5.2E-09 72.6 9.8 36 28-63 171-206 (458)
233 2wpf_A Trypanothione reductase 97.6 0.00034 1.2E-08 70.7 12.3 36 28-63 191-229 (495)
234 1fec_A Trypanothione reductase 97.6 0.00029 9.9E-09 71.1 11.8 36 28-63 187-225 (490)
235 1m6i_A Programmed cell death p 97.6 0.0004 1.4E-08 70.2 11.7 35 28-62 180-218 (493)
236 3ntd_A FAD-dependent pyridine 97.6 0.00061 2.1E-08 70.2 13.2 35 28-62 151-185 (565)
237 1dxl_A Dihydrolipoamide dehydr 97.5 0.00035 1.2E-08 70.2 11.0 37 27-63 176-212 (470)
238 2bc0_A NADH oxidase; flavoprot 97.5 0.00054 1.8E-08 69.2 12.2 36 27-62 193-228 (490)
239 3hyw_A Sulfide-quinone reducta 97.5 5.8E-05 2E-09 75.0 4.8 35 28-62 2-38 (430)
240 4eqs_A Coenzyme A disulfide re 97.5 5.5E-05 1.9E-09 75.3 4.5 46 245-294 192-238 (437)
241 4b1b_A TRXR, thioredoxin reduc 97.5 0.00069 2.4E-08 68.9 12.1 34 28-61 223-256 (542)
242 3lad_A Dihydrolipoamide dehydr 97.5 0.00097 3.3E-08 67.1 13.0 43 253-295 234-279 (476)
243 3vrd_B FCCB subunit, flavocyto 97.5 6.7E-05 2.3E-09 73.8 4.3 42 254-295 216-257 (401)
244 3cgb_A Pyridine nucleotide-dis 97.5 0.00061 2.1E-08 68.6 11.3 36 27-62 185-220 (480)
245 3urh_A Dihydrolipoyl dehydroge 97.4 0.00081 2.8E-08 67.9 12.1 43 253-295 252-299 (491)
246 3s5w_A L-ornithine 5-monooxyge 97.4 0.0016 5.6E-08 65.1 14.2 44 253-296 329-377 (463)
247 1zk7_A HGII, reductase, mercur 97.4 0.0011 3.7E-08 66.5 12.8 43 253-296 229-271 (467)
248 1coy_A Cholesterol oxidase; ox 97.4 9.5E-05 3.3E-09 75.0 5.0 37 26-62 9-45 (507)
249 3gwf_A Cyclohexanone monooxyge 97.4 0.0024 8.1E-08 65.1 15.3 37 26-62 176-212 (540)
250 3fim_B ARYL-alcohol oxidase; A 97.4 7.2E-05 2.5E-09 76.5 3.6 36 28-63 2-38 (566)
251 4dna_A Probable glutathione re 97.4 0.0012 4E-08 66.2 12.4 42 253-295 224-267 (463)
252 2jbv_A Choline oxidase; alcoho 97.3 0.00012 4E-09 75.0 4.5 37 27-63 12-49 (546)
253 1gpe_A Protein (glucose oxidas 97.3 0.00013 4.5E-09 75.3 4.8 37 27-63 23-60 (587)
254 3kd9_A Coenzyme A disulfide re 97.3 0.0012 4.2E-08 65.7 11.2 36 27-62 147-182 (449)
255 3ics_A Coenzyme A-disulfide re 97.3 0.0016 5.4E-08 67.4 12.3 35 28-62 187-221 (588)
256 3l8k_A Dihydrolipoyl dehydroge 97.3 0.0022 7.4E-08 64.3 12.7 41 255-295 226-271 (466)
257 3dk9_A Grase, GR, glutathione 97.2 0.0021 7E-08 64.7 12.4 35 28-62 187-221 (478)
258 3uox_A Otemo; baeyer-villiger 97.2 0.0024 8.1E-08 65.2 12.4 36 27-62 184-219 (545)
259 4eqs_A Coenzyme A disulfide re 97.2 0.0019 6.6E-08 64.0 11.4 36 28-63 147-182 (437)
260 1trb_A Thioredoxin reductase; 97.2 0.0027 9.2E-08 59.9 11.8 35 27-61 144-178 (320)
261 3dgh_A TRXR-1, thioredoxin red 97.2 0.0031 1.1E-07 63.5 12.9 32 28-59 187-218 (483)
262 3itj_A Thioredoxin reductase 1 97.1 0.002 6.8E-08 61.3 10.5 36 27-62 172-207 (338)
263 4ap3_A Steroid monooxygenase; 97.1 0.0029 1E-07 64.6 11.9 37 26-62 189-225 (549)
264 2zbw_A Thioredoxin reductase; 97.0 0.004 1.4E-07 59.1 11.3 35 27-61 151-185 (335)
265 3dgz_A Thioredoxin reductase 2 96.9 0.0056 1.9E-07 61.6 12.2 33 28-60 185-217 (488)
266 3ab1_A Ferredoxin--NADP reduct 96.8 0.0064 2.2E-07 58.5 10.6 35 28-62 163-197 (360)
267 3lzw_A Ferredoxin--NADP reduct 96.6 0.0082 2.8E-07 56.8 10.0 34 28-61 154-187 (332)
268 3qfa_A Thioredoxin reductase 1 96.5 0.019 6.6E-07 58.1 12.0 33 28-60 210-242 (519)
269 3k30_A Histamine dehydrogenase 96.4 0.0074 2.5E-07 63.6 8.9 38 26-63 521-560 (690)
270 4g6h_A Rotenone-insensitive NA 96.4 0.0089 3E-07 60.3 8.8 42 253-294 285-330 (502)
271 1lss_A TRK system potassium up 96.3 0.0043 1.5E-07 50.4 5.3 34 28-61 4-37 (140)
272 4gcm_A TRXR, thioredoxin reduc 96.3 0.0039 1.3E-07 58.6 5.5 35 28-62 145-179 (312)
273 3klj_A NAD(FAD)-dependent dehy 96.3 0.0028 9.7E-08 61.6 4.4 36 28-63 146-181 (385)
274 3fwz_A Inner membrane protein 96.3 0.0066 2.2E-07 49.5 6.0 37 25-61 4-40 (140)
275 2g1u_A Hypothetical protein TM 96.2 0.0063 2.2E-07 50.6 5.6 36 26-61 17-52 (155)
276 3ic5_A Putative saccharopine d 96.1 0.0064 2.2E-07 47.6 5.0 35 27-61 4-39 (118)
277 3llv_A Exopolyphosphatase-rela 96.0 0.0071 2.4E-07 49.3 5.0 34 28-61 6-39 (141)
278 1xhc_A NADH oxidase /nitrite r 95.9 0.007 2.4E-07 58.4 5.4 35 29-63 144-178 (367)
279 4a5l_A Thioredoxin reductase; 95.8 0.009 3.1E-07 56.1 5.4 35 27-61 151-185 (314)
280 3vtf_A UDP-glucose 6-dehydroge 95.8 0.0078 2.7E-07 58.8 4.9 50 6-61 5-54 (444)
281 1f0y_A HCDH, L-3-hydroxyacyl-C 95.7 0.012 4E-07 55.1 5.8 33 28-60 15-47 (302)
282 2x5o_A UDP-N-acetylmuramoylala 95.6 0.0094 3.2E-07 59.0 5.0 36 28-63 5-40 (439)
283 3lk7_A UDP-N-acetylmuramoylala 95.6 0.012 3.9E-07 58.6 5.3 35 27-61 8-42 (451)
284 4e12_A Diketoreductase; oxidor 95.5 0.015 5.2E-07 53.8 5.7 34 28-61 4-37 (283)
285 1id1_A Putative potassium chan 95.5 0.018 6E-07 47.7 5.5 33 28-60 3-35 (153)
286 3i83_A 2-dehydropantoate 2-red 95.3 0.016 5.6E-07 54.6 5.3 34 28-61 2-35 (320)
287 2hmt_A YUAA protein; RCK, KTN, 95.3 0.015 5.1E-07 47.3 4.5 33 28-60 6-38 (144)
288 3ado_A Lambda-crystallin; L-gu 95.3 0.016 5.4E-07 54.2 5.0 35 27-61 5-39 (319)
289 3k6j_A Protein F01G10.3, confi 95.3 0.026 8.9E-07 55.5 6.6 37 26-62 52-88 (460)
290 2dpo_A L-gulonate 3-dehydrogen 95.2 0.018 6.2E-07 54.0 5.0 35 27-61 5-39 (319)
291 3c85_A Putative glutathione-re 95.2 0.021 7.1E-07 48.9 5.0 35 27-61 38-73 (183)
292 3gg2_A Sugar dehydrogenase, UD 95.1 0.02 7E-07 56.6 5.3 33 29-61 3-35 (450)
293 3hn2_A 2-dehydropantoate 2-red 95.0 0.017 5.7E-07 54.3 4.3 34 28-61 2-35 (312)
294 2ew2_A 2-dehydropantoate 2-red 95.0 0.022 7.5E-07 53.5 5.2 33 28-60 3-35 (316)
295 3d1c_A Flavin-containing putat 95.0 0.022 7.7E-07 54.7 5.2 36 27-62 165-200 (369)
296 3l4b_C TRKA K+ channel protien 95.0 0.021 7.1E-07 50.5 4.6 33 29-61 1-33 (218)
297 2q0l_A TRXR, thioredoxin reduc 95.0 0.026 9E-07 52.7 5.6 36 27-62 142-177 (311)
298 3g79_A NDP-N-acetyl-D-galactos 95.0 0.024 8.1E-07 56.3 5.4 37 26-62 16-54 (478)
299 2y0c_A BCEC, UDP-glucose dehyd 95.0 0.023 8E-07 56.6 5.3 34 27-60 7-40 (478)
300 2raf_A Putative dinucleotide-b 94.9 0.03 1E-06 49.1 5.4 37 26-62 17-53 (209)
301 1lld_A L-lactate dehydrogenase 94.9 0.026 8.9E-07 53.2 5.3 36 26-61 5-42 (319)
302 2ewd_A Lactate dehydrogenase,; 94.9 0.026 8.8E-07 53.1 5.2 35 27-61 3-38 (317)
303 3doj_A AT3G25530, dehydrogenas 94.8 0.031 1.1E-06 52.4 5.6 36 26-61 19-54 (310)
304 1kyq_A Met8P, siroheme biosynt 94.8 0.023 7.8E-07 51.8 4.3 35 27-61 12-46 (274)
305 1ks9_A KPA reductase;, 2-dehyd 94.8 0.031 1.1E-06 51.7 5.5 33 29-61 1-33 (291)
306 1fl2_A Alkyl hydroperoxide red 94.7 0.03 1E-06 52.3 5.2 35 28-62 144-178 (310)
307 1t2d_A LDH-P, L-lactate dehydr 94.7 0.037 1.3E-06 52.1 5.7 35 27-61 3-38 (322)
308 1pzg_A LDH, lactate dehydrogen 94.7 0.035 1.2E-06 52.5 5.6 35 27-61 8-43 (331)
309 1zej_A HBD-9, 3-hydroxyacyl-CO 94.7 0.033 1.1E-06 51.5 5.2 34 27-61 11-44 (293)
310 3lxd_A FAD-dependent pyridine 94.7 0.037 1.3E-06 54.3 5.9 37 28-64 152-188 (415)
311 2hjr_A Malate dehydrogenase; m 94.6 0.04 1.4E-06 52.0 5.7 35 27-61 13-48 (328)
312 1vdc_A NTR, NADPH dependent th 94.6 0.035 1.2E-06 52.5 5.4 37 27-63 158-194 (333)
313 1bg6_A N-(1-D-carboxylethyl)-L 94.6 0.034 1.2E-06 53.3 5.3 33 28-60 4-36 (359)
314 3g17_A Similar to 2-dehydropan 94.6 0.021 7.2E-07 53.1 3.7 34 28-61 2-35 (294)
315 3ghy_A Ketopantoate reductase 94.5 0.033 1.1E-06 52.9 5.0 33 28-60 3-35 (335)
316 3eag_A UDP-N-acetylmuramate:L- 94.5 0.038 1.3E-06 52.2 5.4 34 28-61 4-38 (326)
317 2a87_A TRXR, TR, thioredoxin r 94.5 0.039 1.3E-06 52.3 5.5 36 27-62 154-189 (335)
318 2q7v_A Thioredoxin reductase; 94.5 0.039 1.3E-06 52.0 5.5 35 28-62 152-186 (325)
319 3qha_A Putative oxidoreductase 94.5 0.029 9.9E-07 52.2 4.4 36 27-62 14-49 (296)
320 3gvi_A Malate dehydrogenase; N 94.5 0.043 1.5E-06 51.5 5.6 36 26-61 5-41 (324)
321 3pid_A UDP-glucose 6-dehydroge 94.4 0.038 1.3E-06 53.9 5.3 35 26-61 34-68 (432)
322 2xve_A Flavin-containing monoo 94.4 0.037 1.3E-06 55.1 5.2 37 27-63 196-232 (464)
323 1zcj_A Peroxisomal bifunctiona 94.4 0.047 1.6E-06 54.3 5.8 35 27-61 36-70 (463)
324 3g0o_A 3-hydroxyisobutyrate de 94.4 0.043 1.5E-06 51.2 5.3 35 27-61 6-40 (303)
325 3ego_A Probable 2-dehydropanto 94.4 0.042 1.4E-06 51.4 5.2 33 28-61 2-34 (307)
326 3k96_A Glycerol-3-phosphate de 94.3 0.041 1.4E-06 52.6 5.1 34 27-60 28-61 (356)
327 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.042 1.4E-06 48.4 4.7 35 26-60 29-63 (223)
328 3dtt_A NADP oxidoreductase; st 94.3 0.051 1.7E-06 48.9 5.5 36 26-61 17-52 (245)
329 3oc4_A Oxidoreductase, pyridin 94.3 0.05 1.7E-06 54.0 5.9 37 28-64 147-183 (452)
330 4dio_A NAD(P) transhydrogenase 94.3 0.051 1.7E-06 52.3 5.6 35 27-61 189-223 (405)
331 4e21_A 6-phosphogluconate dehy 94.2 0.046 1.6E-06 52.2 5.3 37 25-61 19-55 (358)
332 1z82_A Glycerol-3-phosphate de 94.2 0.046 1.6E-06 51.8 5.3 35 26-60 12-46 (335)
333 4a7p_A UDP-glucose dehydrogena 94.2 0.049 1.7E-06 53.6 5.5 35 28-62 8-42 (446)
334 1evy_A Glycerol-3-phosphate de 94.2 0.031 1E-06 53.8 4.0 31 30-60 17-47 (366)
335 3hwr_A 2-dehydropantoate 2-red 94.1 0.048 1.7E-06 51.3 5.2 34 26-60 17-50 (318)
336 4dll_A 2-hydroxy-3-oxopropiona 94.1 0.049 1.7E-06 51.3 5.1 36 26-61 29-64 (320)
337 4g65_A TRK system potassium up 94.1 0.031 1E-06 55.5 3.8 35 27-61 2-36 (461)
338 3qsg_A NAD-binding phosphogluc 94.1 0.041 1.4E-06 51.6 4.5 34 27-60 23-57 (312)
339 3pef_A 6-phosphogluconate dehy 94.0 0.053 1.8E-06 50.1 5.2 33 29-61 2-34 (287)
340 3cty_A Thioredoxin reductase; 94.0 0.048 1.7E-06 51.1 4.9 35 28-62 155-189 (319)
341 1ur5_A Malate dehydrogenase; o 94.0 0.06 2.1E-06 50.3 5.4 34 28-61 2-36 (309)
342 2v6b_A L-LDH, L-lactate dehydr 94.0 0.056 1.9E-06 50.4 5.2 33 29-61 1-35 (304)
343 1mv8_A GMD, GDP-mannose 6-dehy 93.9 0.046 1.6E-06 53.9 4.7 32 29-60 1-32 (436)
344 4ezb_A Uncharacterized conserv 93.9 0.062 2.1E-06 50.5 5.4 35 27-61 23-58 (317)
345 2h78_A Hibadh, 3-hydroxyisobut 93.9 0.053 1.8E-06 50.5 4.9 35 27-61 2-36 (302)
346 2gv8_A Monooxygenase; FMO, FAD 93.9 0.051 1.8E-06 53.8 5.0 37 27-63 211-248 (447)
347 3p2y_A Alanine dehydrogenase/p 93.8 0.052 1.8E-06 51.8 4.6 35 27-61 183-217 (381)
348 3tl2_A Malate dehydrogenase; c 93.8 0.079 2.7E-06 49.5 5.8 34 27-60 7-41 (315)
349 2vns_A Metalloreductase steap3 93.7 0.067 2.3E-06 47.1 5.0 34 27-60 27-60 (215)
350 2uyy_A N-PAC protein; long-cha 93.7 0.07 2.4E-06 50.1 5.4 35 27-61 29-63 (316)
351 3pdu_A 3-hydroxyisobutyrate de 93.7 0.041 1.4E-06 50.9 3.7 33 29-61 2-34 (287)
352 2q3e_A UDP-glucose 6-dehydroge 93.6 0.053 1.8E-06 54.0 4.7 34 27-60 4-39 (467)
353 3oj0_A Glutr, glutamyl-tRNA re 93.6 0.041 1.4E-06 44.9 3.2 33 28-60 21-53 (144)
354 3mog_A Probable 3-hydroxybutyr 93.6 0.064 2.2E-06 53.4 5.1 34 28-61 5-38 (483)
355 3l6d_A Putative oxidoreductase 93.6 0.079 2.7E-06 49.5 5.4 36 26-61 7-42 (306)
356 4gbj_A 6-phosphogluconate dehy 93.6 0.054 1.9E-06 50.3 4.3 35 27-61 4-38 (297)
357 1dlj_A UDP-glucose dehydrogena 93.6 0.059 2E-06 52.5 4.7 31 29-60 1-31 (402)
358 4ffl_A PYLC; amino acid, biosy 93.5 0.083 2.8E-06 50.7 5.6 34 28-61 1-34 (363)
359 1hyu_A AHPF, alkyl hydroperoxi 93.4 0.06 2E-06 54.5 4.5 36 27-62 354-389 (521)
360 2x8g_A Thioredoxin glutathione 93.3 0.062 2.1E-06 55.5 4.8 33 28-60 286-318 (598)
361 1guz_A Malate dehydrogenase; o 93.3 0.087 3E-06 49.3 5.3 33 29-61 1-35 (310)
362 1txg_A Glycerol-3-phosphate de 93.3 0.062 2.1E-06 50.9 4.4 31 29-59 1-31 (335)
363 4huj_A Uncharacterized protein 93.3 0.041 1.4E-06 48.6 2.9 34 27-60 22-56 (220)
364 2vdc_G Glutamate synthase [NAD 93.3 0.096 3.3E-06 52.0 5.8 37 26-62 262-299 (456)
365 3ldh_A Lactate dehydrogenase; 93.3 0.1 3.5E-06 48.9 5.7 34 27-60 20-55 (330)
366 1y6j_A L-lactate dehydrogenase 93.3 0.085 2.9E-06 49.5 5.1 35 27-61 6-42 (318)
367 2o3j_A UDP-glucose 6-dehydroge 93.2 0.066 2.3E-06 53.5 4.5 33 28-60 9-43 (481)
368 3r9u_A Thioredoxin reductase; 93.2 0.1 3.5E-06 48.6 5.6 36 27-62 146-181 (315)
369 2a9f_A Putative malic enzyme ( 93.1 0.084 2.9E-06 50.3 4.8 35 26-60 186-221 (398)
370 3cky_A 2-hydroxymethyl glutara 93.1 0.085 2.9E-06 49.1 4.9 34 27-60 3-36 (301)
371 1vpd_A Tartronate semialdehyde 93.1 0.08 2.7E-06 49.2 4.7 33 28-60 5-37 (299)
372 3f8d_A Thioredoxin reductase ( 93.1 0.089 3E-06 49.2 5.0 36 27-62 153-188 (323)
373 2i6t_A Ubiquitin-conjugating e 93.0 0.083 2.8E-06 49.1 4.6 35 27-61 13-49 (303)
374 4aj2_A L-lactate dehydrogenase 93.0 0.12 4.2E-06 48.5 5.8 40 21-60 12-53 (331)
375 1jay_A Coenzyme F420H2:NADP+ o 93.0 0.11 3.8E-06 45.4 5.2 32 29-60 1-33 (212)
376 2qyt_A 2-dehydropantoate 2-red 93.0 0.061 2.1E-06 50.5 3.7 32 28-59 8-45 (317)
377 3p7m_A Malate dehydrogenase; p 92.9 0.13 4.4E-06 48.2 5.7 35 27-61 4-39 (321)
378 2pv7_A T-protein [includes: ch 92.9 0.13 4.5E-06 47.7 5.9 35 27-61 20-55 (298)
379 1hyh_A L-hicdh, L-2-hydroxyiso 92.9 0.089 3E-06 49.2 4.7 33 29-61 2-36 (309)
380 3dfu_A Uncharacterized protein 92.9 0.039 1.3E-06 48.9 2.0 34 27-60 5-38 (232)
381 2wtb_A MFP2, fatty acid multif 92.8 0.1 3.5E-06 54.9 5.5 34 27-60 311-344 (725)
382 3pqe_A L-LDH, L-lactate dehydr 92.8 0.11 3.6E-06 48.9 5.0 34 27-60 4-39 (326)
383 3c24_A Putative oxidoreductase 92.8 0.14 4.8E-06 47.2 5.8 33 28-60 11-44 (286)
384 1vl6_A Malate oxidoreductase; 92.7 0.11 3.7E-06 49.5 4.9 35 26-60 190-225 (388)
385 1a5z_A L-lactate dehydrogenase 92.7 0.093 3.2E-06 49.3 4.5 32 29-60 1-34 (319)
386 3ggo_A Prephenate dehydrogenas 92.7 0.13 4.6E-06 48.1 5.5 34 28-61 33-68 (314)
387 3c7a_A Octopine dehydrogenase; 92.6 0.069 2.4E-06 52.1 3.6 30 29-58 3-33 (404)
388 3o0h_A Glutathione reductase; 92.5 0.13 4.4E-06 51.5 5.6 37 27-63 190-226 (484)
389 1x13_A NAD(P) transhydrogenase 92.5 0.13 4.5E-06 49.9 5.5 35 27-61 171-205 (401)
390 2ahr_A Putative pyrroline carb 92.5 0.12 4.2E-06 46.8 5.0 34 27-60 2-35 (259)
391 3gt0_A Pyrroline-5-carboxylate 92.4 0.13 4.5E-06 46.2 5.0 33 28-60 2-38 (247)
392 4gwg_A 6-phosphogluconate dehy 92.4 0.11 3.9E-06 51.5 4.9 35 27-61 3-37 (484)
393 3l9w_A Glutathione-regulated p 92.4 0.12 4.2E-06 50.3 5.0 35 27-61 3-37 (413)
394 2izz_A Pyrroline-5-carboxylate 92.4 0.12 4.1E-06 48.6 4.8 35 27-61 21-59 (322)
395 1l7d_A Nicotinamide nucleotide 92.3 0.15 5.1E-06 49.3 5.6 35 27-61 171-205 (384)
396 3fbs_A Oxidoreductase; structu 92.3 0.13 4.3E-06 47.5 4.9 34 27-61 140-173 (297)
397 1yj8_A Glycerol-3-phosphate de 92.3 0.083 2.8E-06 51.0 3.7 35 28-62 21-62 (375)
398 1yb4_A Tartronic semialdehyde 92.3 0.092 3.1E-06 48.7 3.9 33 28-61 3-35 (295)
399 1nyt_A Shikimate 5-dehydrogena 92.3 0.16 5.5E-06 46.4 5.4 34 27-60 118-151 (271)
400 2f1k_A Prephenate dehydrogenas 92.3 0.14 4.9E-06 46.9 5.2 32 29-60 1-32 (279)
401 2g5c_A Prephenate dehydrogenas 92.2 0.15 5.3E-06 46.8 5.3 32 29-60 2-35 (281)
402 1oju_A MDH, malate dehydrogena 92.2 0.12 4E-06 47.8 4.5 33 29-61 1-35 (294)
403 1yqg_A Pyrroline-5-carboxylate 92.2 0.12 4.2E-06 46.9 4.5 32 29-60 1-33 (263)
404 3ius_A Uncharacterized conserv 92.1 0.14 4.7E-06 47.1 4.9 35 27-61 4-38 (286)
405 1x0v_A GPD-C, GPDH-C, glycerol 92.1 0.079 2.7E-06 50.6 3.3 35 28-62 8-49 (354)
406 3vku_A L-LDH, L-lactate dehydr 92.1 0.14 4.9E-06 47.9 4.9 35 26-60 7-43 (326)
407 2p4q_A 6-phosphogluconate dehy 92.1 0.14 4.9E-06 51.2 5.1 35 27-61 9-43 (497)
408 1pjc_A Protein (L-alanine dehy 92.0 0.18 6E-06 48.3 5.6 33 28-60 167-199 (361)
409 3nep_X Malate dehydrogenase; h 92.0 0.14 4.7E-06 47.8 4.6 33 29-61 1-35 (314)
410 1cjc_A Protein (adrenodoxin re 91.9 0.16 5.3E-06 50.5 5.2 36 27-62 144-200 (460)
411 1wdk_A Fatty oxidation complex 91.8 0.14 4.8E-06 53.8 5.0 35 27-61 313-347 (715)
412 3phh_A Shikimate dehydrogenase 91.8 0.21 7E-06 45.4 5.5 34 28-61 118-151 (269)
413 3ojo_A CAP5O; rossmann fold, c 91.8 0.14 4.7E-06 50.1 4.6 34 28-61 11-44 (431)
414 3ktd_A Prephenate dehydrogenas 91.8 0.17 5.9E-06 47.8 5.2 35 27-61 7-41 (341)
415 2rcy_A Pyrroline carboxylate r 91.7 0.14 4.8E-06 46.4 4.4 35 28-62 4-42 (262)
416 2eez_A Alanine dehydrogenase; 91.7 0.2 6.8E-06 48.1 5.6 35 27-61 165-199 (369)
417 2cvz_A Dehydrogenase, 3-hydrox 91.7 0.13 4.6E-06 47.4 4.3 32 29-61 2-33 (289)
418 2gf2_A Hibadh, 3-hydroxyisobut 91.7 0.15 5E-06 47.3 4.5 33 29-61 1-33 (296)
419 1pjq_A CYSG, siroheme synthase 91.7 0.17 6E-06 50.0 5.3 34 27-60 11-44 (457)
420 2zyd_A 6-phosphogluconate dehy 91.6 0.14 4.7E-06 51.1 4.5 34 27-60 14-47 (480)
421 3e8x_A Putative NAD-dependent 91.6 0.22 7.6E-06 44.2 5.5 35 27-61 20-55 (236)
422 1p77_A Shikimate 5-dehydrogena 91.5 0.16 5.5E-06 46.4 4.6 34 27-60 118-151 (272)
423 3obb_A Probable 3-hydroxyisobu 91.5 0.18 6.2E-06 46.7 4.9 34 28-61 3-36 (300)
424 2egg_A AROE, shikimate 5-dehyd 91.4 0.22 7.4E-06 46.2 5.3 34 27-60 140-174 (297)
425 3d0o_A L-LDH 1, L-lactate dehy 91.4 0.19 6.6E-06 47.0 5.0 34 27-60 5-40 (317)
426 2pgd_A 6-phosphogluconate dehy 91.3 0.17 5.8E-06 50.5 4.8 33 29-61 3-35 (482)
427 3dhn_A NAD-dependent epimerase 91.2 0.21 7.2E-06 44.0 5.0 35 27-61 3-38 (227)
428 1jw9_B Molybdopterin biosynthe 91.2 0.18 6.2E-06 45.3 4.5 33 28-60 31-64 (249)
429 2vhw_A Alanine dehydrogenase; 91.2 0.25 8.4E-06 47.6 5.6 34 27-60 167-200 (377)
430 1ldn_A L-lactate dehydrogenase 91.2 0.21 7.1E-06 46.8 5.0 34 27-60 5-40 (316)
431 1o94_A Tmadh, trimethylamine d 91.1 0.21 7E-06 52.9 5.5 35 27-61 527-563 (729)
432 3tri_A Pyrroline-5-carboxylate 91.1 0.22 7.7E-06 45.7 5.1 34 28-61 3-39 (280)
433 2rir_A Dipicolinate synthase, 91.1 0.26 8.8E-06 45.8 5.5 36 26-61 155-190 (300)
434 3fi9_A Malate dehydrogenase; s 91.0 0.24 8.2E-06 46.8 5.3 34 27-60 7-43 (343)
435 3gpi_A NAD-dependent epimerase 91.0 0.25 8.5E-06 45.4 5.4 34 28-61 3-36 (286)
436 1i36_A Conserved hypothetical 91.0 0.19 6.5E-06 45.6 4.5 31 29-59 1-31 (264)
437 1ez4_A Lactate dehydrogenase; 91.0 0.2 6.9E-06 46.9 4.7 35 26-60 3-39 (318)
438 2qrj_A Saccharopine dehydrogen 90.9 0.17 5.8E-06 48.4 4.1 40 27-66 213-257 (394)
439 3d4o_A Dipicolinate synthase s 90.9 0.29 9.8E-06 45.3 5.6 36 26-61 153-188 (293)
440 4a9w_A Monooxygenase; baeyer-v 90.9 0.23 7.7E-06 47.1 5.1 33 27-60 162-194 (357)
441 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.8 0.18 6.3E-06 50.2 4.5 32 29-60 2-33 (478)
442 3zwc_A Peroxisomal bifunctiona 90.4 0.3 1E-05 51.2 5.8 36 26-61 314-349 (742)
443 3ew7_A LMO0794 protein; Q8Y8U8 90.4 0.33 1.1E-05 42.4 5.4 32 29-60 1-33 (221)
444 2hk9_A Shikimate dehydrogenase 90.4 0.23 7.8E-06 45.5 4.4 34 27-60 128-161 (275)
445 1edz_A 5,10-methylenetetrahydr 90.4 0.27 9.2E-06 45.7 4.9 35 26-60 175-210 (320)
446 2iz1_A 6-phosphogluconate dehy 90.3 0.24 8.3E-06 49.3 4.9 33 28-60 5-37 (474)
447 3d1l_A Putative NADP oxidoredu 90.3 0.19 6.4E-06 45.8 3.8 33 28-60 10-43 (266)
448 2aef_A Calcium-gated potassium 90.3 0.15 5.1E-06 45.4 3.0 34 27-61 8-41 (234)
449 2zqz_A L-LDH, L-lactate dehydr 90.2 0.29 1E-05 45.9 5.1 35 26-60 7-43 (326)
450 2x0j_A Malate dehydrogenase; o 90.2 0.23 7.9E-06 45.7 4.3 32 29-60 1-34 (294)
451 1mld_A Malate dehydrogenase; o 90.1 0.29 9.8E-06 45.7 4.9 33 29-61 1-36 (314)
452 1np3_A Ketol-acid reductoisome 90.1 0.29 9.8E-06 46.3 5.0 34 28-61 16-49 (338)
453 3h2s_A Putative NADH-flavin re 90.1 0.35 1.2E-05 42.4 5.3 32 29-60 1-33 (224)
454 1w4x_A Phenylacetone monooxyge 90.0 0.26 8.7E-06 50.1 4.9 35 27-61 185-219 (542)
455 2gag_A Heterotetrameric sarcos 89.9 0.16 5.6E-06 55.4 3.5 37 28-64 284-320 (965)
456 3u62_A Shikimate dehydrogenase 89.6 0.36 1.2E-05 43.4 5.0 33 27-60 108-141 (253)
457 3b1f_A Putative prephenate deh 89.6 0.33 1.1E-05 44.8 4.8 33 28-60 6-40 (290)
458 4hv4_A UDP-N-acetylmuramate--L 89.5 0.26 8.8E-06 49.4 4.3 36 26-61 20-56 (494)
459 1smk_A Malate dehydrogenase, g 89.5 0.27 9.4E-06 46.2 4.3 35 27-61 7-44 (326)
460 4b4o_A Epimerase family protei 89.5 0.47 1.6E-05 43.8 5.9 33 29-61 1-34 (298)
461 1gte_A Dihydropyrimidine dehyd 89.5 0.3 1E-05 53.7 5.2 34 28-61 332-366 (1025)
462 1lqt_A FPRA; NADP+ derivative, 89.4 0.34 1.2E-05 47.9 5.1 36 27-62 146-202 (456)
463 1leh_A Leucine dehydrogenase; 89.4 0.42 1.4E-05 45.5 5.4 35 26-60 171-205 (364)
464 2dbq_A Glyoxylate reductase; D 89.3 0.47 1.6E-05 44.8 5.7 37 26-62 148-184 (334)
465 1nvt_A Shikimate 5'-dehydrogen 89.3 0.35 1.2E-05 44.5 4.8 33 27-60 127-159 (287)
466 3don_A Shikimate dehydrogenase 89.3 0.26 8.8E-06 45.1 3.8 35 27-61 116-151 (277)
467 1hdo_A Biliverdin IX beta redu 89.3 0.5 1.7E-05 40.6 5.6 33 29-61 4-37 (206)
468 3c4n_A Uncharacterized protein 89.3 0.16 5.4E-06 49.5 2.5 51 245-296 176-236 (405)
469 3ond_A Adenosylhomocysteinase; 89.3 0.41 1.4E-05 47.1 5.4 34 27-60 264-297 (488)
470 2yjz_A Metalloreductase steap4 88.8 0.073 2.5E-06 46.2 0.0 35 27-61 18-52 (201)
471 3r6d_A NAD-dependent epimerase 89.2 0.6 2E-05 40.8 6.1 34 28-61 5-40 (221)
472 3pwz_A Shikimate dehydrogenase 89.1 0.47 1.6E-05 43.2 5.4 34 27-60 119-153 (272)
473 3o8q_A Shikimate 5-dehydrogena 89.1 0.49 1.7E-05 43.3 5.5 34 27-60 125-159 (281)
474 2d5c_A AROE, shikimate 5-dehyd 89.1 0.4 1.4E-05 43.5 4.9 31 30-60 118-148 (263)
475 3fbt_A Chorismate mutase and s 88.9 0.45 1.5E-05 43.5 5.1 34 27-60 121-155 (282)
476 3tnl_A Shikimate dehydrogenase 88.8 0.52 1.8E-05 43.8 5.5 34 27-60 153-187 (315)
477 3h8v_A Ubiquitin-like modifier 88.8 0.33 1.1E-05 44.6 4.1 34 27-60 35-69 (292)
478 1n7h_A GDP-D-mannose-4,6-dehyd 88.7 0.49 1.7E-05 45.4 5.6 34 28-61 28-62 (381)
479 3rui_A Ubiquitin-like modifier 88.6 0.51 1.8E-05 44.2 5.3 34 27-60 33-67 (340)
480 1a4i_A Methylenetetrahydrofola 88.5 0.54 1.8E-05 43.0 5.2 35 26-60 163-198 (301)
481 3jyo_A Quinate/shikimate dehyd 88.5 0.56 1.9E-05 43.0 5.4 34 27-60 126-160 (283)
482 1zud_1 Adenylyltransferase THI 88.4 0.47 1.6E-05 42.6 4.9 34 27-60 27-61 (251)
483 1y7t_A Malate dehydrogenase; N 88.3 0.39 1.3E-05 45.2 4.5 34 27-60 3-44 (327)
484 3ngx_A Bifunctional protein fo 88.3 0.57 1.9E-05 42.3 5.2 34 26-59 148-182 (276)
485 2gcg_A Glyoxylate reductase/hy 88.3 0.53 1.8E-05 44.3 5.3 36 26-61 153-188 (330)
486 4a26_A Putative C-1-tetrahydro 88.2 0.56 1.9E-05 42.9 5.2 35 26-60 163-198 (300)
487 2d4a_B Malate dehydrogenase; a 88.2 0.37 1.3E-05 44.9 4.1 32 30-61 1-33 (308)
488 3qvo_A NMRA family protein; st 88.2 0.4 1.4E-05 42.5 4.3 35 27-61 22-58 (236)
489 3ce6_A Adenosylhomocysteinase; 88.1 0.59 2E-05 46.4 5.7 36 26-61 272-307 (494)
490 2pzm_A Putative nucleotide sug 88.1 0.66 2.3E-05 43.5 6.0 35 26-60 18-53 (330)
491 3gvp_A Adenosylhomocysteinase 87.9 0.61 2.1E-05 45.1 5.4 36 26-61 218-253 (435)
492 3abi_A Putative uncharacterize 87.8 0.53 1.8E-05 45.0 5.1 34 26-60 14-47 (365)
493 3orq_A N5-carboxyaminoimidazol 87.7 0.92 3.1E-05 43.5 6.8 36 26-61 10-45 (377)
494 3fpz_A Thiazole biosynthetic e 87.6 0.35 1.2E-05 45.4 3.6 42 438-479 279-325 (326)
495 1y1p_A ARII, aldehyde reductas 87.6 0.87 3E-05 42.7 6.5 35 26-60 9-44 (342)
496 1b0a_A Protein (fold bifunctio 87.5 0.65 2.2E-05 42.2 5.1 35 26-60 157-192 (288)
497 3ba1_A HPPR, hydroxyphenylpyru 87.5 0.63 2.1E-05 43.8 5.3 35 27-61 163-197 (333)
498 3vps_A TUNA, NAD-dependent epi 87.4 0.6 2.1E-05 43.4 5.2 36 27-62 6-42 (321)
499 1gpj_A Glutamyl-tRNA reductase 87.4 0.58 2E-05 45.4 5.2 35 27-61 166-201 (404)
500 3q2o_A Phosphoribosylaminoimid 87.4 0.88 3E-05 43.9 6.5 36 26-61 12-47 (389)
No 1
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=2.2e-46 Score=386.30 Aligned_cols=439 Identities=22% Similarity=0.284 Sum_probs=315.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCC-CeeeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSF-GFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~-g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (507)
+++||+|||||++||+||++|+++|++|+|||+++++||+++|.... |+.+|.|++++++. ++.+.++++++|++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~--~~~~~~l~~~lgl~~~ 80 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT--QNRILRLAKELGLETY 80 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT--CHHHHHHHHHTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC--cHHHHHHHHHcCCcce
Confidence 46899999999999999999999999999999999999999998885 99999999999743 5578899999999865
Q ss_pred eecCCCccc-ccccchhhhhhhhhhHHhhhcccceeecCCCC-ccCHHHHHHHHHHHHHHHHHHHHHhhc----------
Q 010542 106 RTSGDNSVL-YDHDLESRVLKTVVVSLIQANLCYALFDMDGN-QVPQELVTKVGEAFESILKETDKVREE---------- 173 (507)
Q Consensus 106 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 173 (507)
........+ +.++. ...+..... ......... +.++.....++...
T Consensus 81 ~~~~~~~~~~~~~g~------------------~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 138 (520)
T 1s3e_A 81 KVNEVERLIHHVKGK------------------SYPFRGPFPPVWNPITYLD----HNNFWRTMDDMGREIPSDAPWKAP 138 (520)
T ss_dssp ECCCSSEEEEEETTE------------------EEEECSSSCCCCSHHHHHH----HHHHHHHHHHHHTTSCTTCGGGST
T ss_pred ecccCCceEEEECCE------------------EEEecCCCCCCCCHHHHHH----HHHHHHHHHHHHhhcCcCCCcccc
Confidence 432222111 11110 001111000 011111111 11122222211111
Q ss_pred ---CCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcccc------------ccCCc
Q 010542 174 ---HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL------------LPGGH 237 (507)
Q Consensus 174 ---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~------------~~~~~ 237 (507)
..++.++.++++... ..+.++.++.++ ...++.++.++++..+..... ..+..
T Consensus 139 ~~~~~~~~s~~~~l~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~ 207 (520)
T 1s3e_A 139 LAEEWDNMTMKELLDKLC-----------WTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQE 207 (520)
T ss_dssp THHHHHTSBHHHHHHHHC-----------SSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTS
T ss_pred chhhhhccCHHHHHHhhC-----------CCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcce
Confidence 023567777776432 223334444544 346777777777665421100 11234
Q ss_pred cccccchHHHHHHHhc--cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHH
Q 010542 238 GLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 315 (507)
Q Consensus 238 ~~~~~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~ 315 (507)
.++.+|++.++++|.+ |++|++|++|++|..+++++.|++.+|+++.||+||+|+|+..+..+ .+.|.+|+...+.
T Consensus 208 ~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l--~~~p~lp~~~~~~ 285 (520)
T 1s3e_A 208 RKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKI--HFNPPLPMMRNQM 285 (520)
T ss_dssp EEETTCTHHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGS--EEESCCCHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcce--eeCCCCCHHHHHH
Confidence 5789999999999987 88999999999999998899999999989999999999999987643 4678899999999
Q ss_pred HHHcCCcceeEEEEEccCCCCCCCccceeec--CC-CCceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHH
Q 010542 316 IDDLGVGIENKIIMHFDKVFWPNVEFLGVVS--DT-SYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAF 392 (507)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~ 392 (507)
+.+++++...++++.|++++|++.++.|... .. ......++....+++..++++++.+..+..|.+++++++++.++
T Consensus 286 i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl 365 (520)
T 1s3e_A 286 ITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLC 365 (520)
T ss_dssp TTSCCBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHH
T ss_pred HHhCCCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHH
Confidence 9999999999999999999998765555432 22 22223333333333457888888887777888999999999999
Q ss_pred HHHHHhCCC--CCCCcEEEeccCCCCCCCCcccc-cCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHH
Q 010542 393 TQLKKILPD--ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLM 469 (507)
Q Consensus 393 ~~L~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~ 469 (507)
++|+++||. ...|..+...+|..++++.|+|. +..+++.....+.+.+|++||||||++++..++|+++||+.||.+
T Consensus 366 ~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~ 445 (520)
T 1s3e_A 366 ELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGER 445 (520)
T ss_dssp HHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHH
T ss_pred HHHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHH
Confidence 999999985 35788889999999999999887 566777655566788999999999999987777999999999999
Q ss_pred HHHHHHHHHHHHhCCCCccccccCCCccccccee
Q 010542 470 AAEDCRMRVLERYGELDLFQPVMGEETPISVPFL 503 (507)
Q Consensus 470 aA~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (507)
||++|++.+... .....++....+......||.
T Consensus 446 aA~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 478 (520)
T 1s3e_A 446 AAREILHAMGKI-PEDEIWQSEPESVDVPAQPIT 478 (520)
T ss_dssp HHHHHHHHTTSS-CGGGSSCCCCCCSSSCCCCCC
T ss_pred HHHHHHHHHhcC-ccccccccCCccccCCccccc
Confidence 999998876432 334555555555566666664
No 2
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=2.7e-44 Score=364.86 Aligned_cols=419 Identities=21% Similarity=0.280 Sum_probs=296.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCeee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLYR 106 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~ 106 (507)
.++||+|||||++||+||++|+++|++|+|||+++++||++++....|+.+|.|++++.. ....+.++++++|+....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP--DQTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT--TCHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecC--ccHHHHHHHHHcCCcccc
Confidence 357999999999999999999999999999999999999999988789999999998864 345788999999998654
Q ss_pred ecCCCccc-ccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhc---------CCC
Q 010542 107 TSGDNSVL-YDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREE---------HDE 176 (507)
Q Consensus 107 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 176 (507)
.......+ +..+.. ...+......+...........+..+.......... ...
T Consensus 82 ~~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (453)
T 2yg5_A 82 RYREGESVYISSAGE-----------------RTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLD 144 (453)
T ss_dssp CCCCSEEEEECTTSC-----------------EEEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHH
T ss_pred cccCCCEEEEeCCCc-----------------eeeccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhh
Confidence 33222111 111000 011111111122211111111111111111111100 113
Q ss_pred CCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhhh-ccccCCcc-cccccccCcccccc-----------CCccccccc
Q 010542 177 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRME-GWFAADAE-TISLKSWDKEELLP-----------GGHGLMVRG 243 (507)
Q Consensus 177 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~s~~~~~~~~~~~-----------~~~~~~~~G 243 (507)
+.++.+++.... ..+.++.++.++. ..++.++. .+++..+....... ....++.+|
T Consensus 145 ~~s~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG 213 (453)
T 2yg5_A 145 TVSFKQWLINQS-----------DDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG 213 (453)
T ss_dssp SSBHHHHHHHHC-----------SCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC
T ss_pred hccHHHHHHhhc-----------CCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC
Confidence 567777766432 2233444555543 56666776 77665442111111 123578899
Q ss_pred hHHHHHHHhc--cCCcccCceeEEEEeeCCc-EEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcC
Q 010542 244 YLPVINTLAK--GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLG 320 (507)
Q Consensus 244 ~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~ 320 (507)
++.++++|.+ |++|++|++|++|..++++ +.|++ +|+++.||+||+|+|+..+..+ .+.|.+|+...+.+.+++
T Consensus 214 ~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l--~~~p~lp~~~~~~i~~~~ 290 (453)
T 2yg5_A 214 MQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSRI--SYDPPLPRRQHQMHQHQS 290 (453)
T ss_dssp THHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGGS--EEESCCCHHHHHHGGGEE
T ss_pred hHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhcC--EeCCCCCHHHHHHHhcCC
Confidence 9999999987 6799999999999999888 88876 6778999999999999987643 467889999899999999
Q ss_pred CcceeEEEEEccCCCCCCCccceeecCC-CCceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhC
Q 010542 321 VGIENKIIMHFDKVFWPNVEFLGVVSDT-SYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKIL 399 (507)
Q Consensus 321 ~~~~~~~~l~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~ 399 (507)
+....++++.|++++|++.++.|.+... ......+++...+++..++++++.+..+..|.+++++++++.++++|++++
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~ 370 (453)
T 2yg5_A 291 LGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYL 370 (453)
T ss_dssp ECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999866555554322 222333343332333568888887777778888999999999999999999
Q ss_pred CC-CCCCcEEEeccCCCCCCCCcccc-cCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHH
Q 010542 400 PD-ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 477 (507)
Q Consensus 400 p~-~~~~~~~~~~~w~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~ 477 (507)
|. ..+|..+..++|..++++.|+|. +..++......+.+.+|++||||||++++..++|+++||+.||.+||++|++.
T Consensus 371 ~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 371 GPKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp CGGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHH
Confidence 74 45788888999999999998875 44577554555568899999999999998777799999999999999999875
Q ss_pred H
Q 010542 478 V 478 (507)
Q Consensus 478 l 478 (507)
+
T Consensus 451 l 451 (453)
T 2yg5_A 451 S 451 (453)
T ss_dssp C
T ss_pred h
Confidence 4
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=2.2e-42 Score=365.46 Aligned_cols=421 Identities=31% Similarity=0.536 Sum_probs=307.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccC-CCeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS-FGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
...+||+|||||++||+||+.|++.|++|+|+|+.+++||+++|... .|+.+|.|++++++. ..+.+..+++++|++.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~-~~np~~~l~~~lGl~~ 412 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGC-INNPVALMCEQLGISM 412 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECC-TTCHHHHHHHHHTCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCC-ccChHHHHHHHhCCcc
Confidence 44689999999999999999999999999999999999999988654 589999999999874 4556788999999975
Q ss_pred eeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhc--CCCCCcHHH
Q 010542 105 YRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREE--HDEDMSIQR 182 (507)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 182 (507)
........++ ...+..............+..+.......... ...+.++.+
T Consensus 413 ~~~~~~~~l~---------------------------~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~ 465 (776)
T 4gut_A 413 HKFGERCDLI---------------------------QEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGE 465 (776)
T ss_dssp EECCSCCCEE---------------------------CTTSCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHH
T ss_pred cccccccceE---------------------------ccCCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHH
Confidence 5433322221 11222222222222222333333333332221 123445554
Q ss_pred HHHHHhccChhHHhh-----hhHHHHHHHHHHhhhccccCCcccccccccCcc---ccccCCccccccchHHHHHHHhcc
Q 010542 183 AISIVFDRRPELRLE-----GLAHKVLQWYLCRMEGWFAADAETISLKSWDKE---ELLPGGHGLMVRGYLPVINTLAKG 254 (507)
Q Consensus 183 ~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---~~~~~~~~~~~~G~~~l~~~l~~g 254 (507)
.+...+... +... ......+......+....+..+..++...+... ....+....+.+|++.++++|.+|
T Consensus 466 ~~~~~~~~~--l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~g 543 (776)
T 4gut_A 466 KIEEIYKAF--IKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEG 543 (776)
T ss_dssp HHHHHHHHH--HHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHTT
T ss_pred HHHHHHHHH--HHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHhC
Confidence 433222110 0000 111222222222222334455555555544321 123455567889999999999999
Q ss_pred CCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEEccCC
Q 010542 255 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKV 334 (507)
Q Consensus 255 ~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 334 (507)
++|++|++|++|+.++++|.|++.+|+++.||+||+|+|+..+....+.|.|+||+...+++..++++...|+++.|+.+
T Consensus 544 l~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~ 623 (776)
T 4gut_A 544 LDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYR 623 (776)
T ss_dssp SCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSC
T ss_pred CcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcc
Confidence 99999999999999999999999999899999999999999987666789999999999999999999999999999999
Q ss_pred CCCCC----ccceeecCCC---CceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCC
Q 010542 335 FWPNV----EFLGVVSDTS---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSP 405 (507)
Q Consensus 335 ~~~~~----~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~--~~~~ 405 (507)
||++. +++|.+.... .....+.+..+.++..+|++++.+..+..+..++++++++.++++|.++|+. ...|
T Consensus 624 FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P 703 (776)
T 4gut_A 624 FWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDP 703 (776)
T ss_dssp TTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCC
T ss_pred cccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCc
Confidence 99742 3455543321 1222333434344467888899888888899999999999999999999985 4568
Q ss_pred cEEEeccCCCCCCCCcccccCCCCCchHHHHHhcCCC-CceEEeeccccCcCCchhhHHHHHHHHHHHHHHH
Q 010542 406 IQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 476 (507)
Q Consensus 406 ~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~ 476 (507)
..+.+.+|..++++.|+|.+..+|......+.+.+|+ ++|||||++++..++|+|+||+.||.+||++|+.
T Consensus 704 ~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 704 TKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp SEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred ceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999877887766777888886 8999999999988889999999999999999874
No 4
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=5.4e-42 Score=360.97 Aligned_cols=447 Identities=31% Similarity=0.500 Sum_probs=296.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (507)
...+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.+..++.+|.|++++++. ..+.+..+.+++|++..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~l~~~l~~~~~ 183 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL-GGNPMAVVSKQVNMELA 183 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETTEEEESSCCEECCS-BTCHHHHHHHHHTCCEE
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccccCchhhcCcEEEeCC-CCchHHHHHHHhCcchh
Confidence 56789999999999999999999999999999999999999999888899999999998764 34567788999999765
Q ss_pred eecCCCcccccccchh-h--------hhhhhh--hHHhhhcccceeecCCCCccCH-HHHHHHH--------HHHHHHHH
Q 010542 106 RTSGDNSVLYDHDLES-R--------VLKTVV--VSLIQANLCYALFDMDGNQVPQ-ELVTKVG--------EAFESILK 165 (507)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~ 165 (507)
.......++...+... . .+.... .............. ...... .....+. ..+.....
T Consensus 184 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 261 (662)
T 2z3y_A 184 KIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN--NKPVSLGQALEVVIQLQEKHVKDEQIEHWK 261 (662)
T ss_dssp ECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEET--TEECBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceEEeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccC--CCCCCHHHHHHHHHHhhhhhhhhhhhhhhh
Confidence 5432222222211110 0 000000 00000000000000 111111 1111100 00000000
Q ss_pred HH----H-------HHh------hcCCCC----------------CcHHH-------HHHHHhccChhHH----------
Q 010542 166 ET----D-------KVR------EEHDED----------------MSIQR-------AISIVFDRRPELR---------- 195 (507)
Q Consensus 166 ~~----~-------~~~------~~~~~~----------------~~~~~-------~~~~~~~~~~~l~---------- 195 (507)
.+ . ++. ...... .++.. .++.+........
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (662)
T 2z3y_A 262 KIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELE 341 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhhHHHHHhhhhhhhhhhhhHHHHHHHhh
Confidence 00 0 000 000000 00000 0000000000000
Q ss_pred --------hhhhHHHHHHHHHHhhhccccCCcccccccccCcc--ccccCCccccccchHHHHHHHhccCCcccCceeEE
Q 010542 196 --------LEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTK 265 (507)
Q Consensus 196 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~G~~~l~~~l~~g~~i~~~~~V~~ 265 (507)
.......++++++..+....+.....+++..+... ....+....+.+|++.|+++|.++++|++|++|++
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~l~~~La~~l~I~l~~~V~~ 421 (662)
T 2z3y_A 342 ANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQ 421 (662)
T ss_dssp TSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEEETTCTTHHHHHHTTTCEEETTEEEEE
T ss_pred ccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceeeecCcHHHHHHHHHhcCceecCCeEEE
Confidence 00011122233222222223445555665544322 12345567889999999999999999999999999
Q ss_pred EEeeCCcEEEEEcC------CcEEEcCEEEEecCchhhccC--cccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCC
Q 010542 266 ITRHYIGVKVTVEG------GKTFVADAVVVAVPLGVLKAR--TIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 337 (507)
Q Consensus 266 I~~~~~~v~v~~~~------g~~~~ad~VI~a~p~~~~~~l--~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 337 (507)
|..+++++.|++.+ |+++.||+||+|+|+..+..+ .+.|.|+||+...+++.+++++...|+++.|+++||+
T Consensus 422 I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~ 501 (662)
T 2z3y_A 422 VRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 501 (662)
T ss_dssp EEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred EEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCccccc
Confidence 99999999998876 568999999999999998763 3678999999999999999999999999999999998
Q ss_pred C-CccceeecCCC---CceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEEec
Q 010542 338 N-VEFLGVVSDTS---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVS 411 (507)
Q Consensus 338 ~-~~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~--~~~~~~~~~~ 411 (507)
+ .+.+|.+.... .....+++.. +..+|++++.+..+..+..++++++++.++++|.++|+. ..+|..+.+.
T Consensus 502 ~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~ 578 (662)
T 2z3y_A 502 PSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVS 578 (662)
T ss_dssp TTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEEC
T ss_pred CCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEE
Confidence 5 35566654321 1112222222 445888888888888888999999999999999999976 4578899999
Q ss_pred cCCCCCCCCcccccCCCCCchHHHHHhcCCC-------------CceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHH
Q 010542 412 HWGTDANSLGSYSYDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 478 (507)
Q Consensus 412 ~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------------~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l 478 (507)
+|..++++.|+|++..+|......+.+..|+ ++|||||++++..++|||+||+.||.+||++|++.+
T Consensus 579 ~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~ 658 (662)
T 2z3y_A 579 RWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 658 (662)
T ss_dssp CTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999888998766666666654 689999999998788999999999999999998765
No 5
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.5e-43 Score=361.59 Aligned_cols=408 Identities=21% Similarity=0.284 Sum_probs=290.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCC--Cee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGL--PLY 105 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~--~~~ 105 (507)
.+||+|||||++||+||++|+++|++|+|||+++++|||++|...+|+.+|.|++++++ .+..+.++++++|+ +..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~--~~~~~~~~l~~lgl~~~~~ 116 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHW--HQSHVWREITRYKMHNALS 116 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCT--TSHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecC--ccHHHHHHHHHcCCcceee
Confidence 38999999999999999999999999999999999999999998899999999999974 35578999999999 443
Q ss_pred eec----CCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHH-HHHHHHHHHHHHHH----HHHHHhh----
Q 010542 106 RTS----GDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQE-LVTKVGEAFESILK----ETDKVRE---- 172 (507)
Q Consensus 106 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~---- 172 (507)
... ....+.+..+. .....++.. ........+.++.. ....+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (495)
T 2vvm_A 117 PSFNFSRGVNHFQLRTNP-----------------------TTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHD 173 (495)
T ss_dssp ESCCCSSSCCEEEEESST-----------------------TCCEEECHHHHHHHHHHHHHHHHCSSSSTTTTTCSCTTS
T ss_pred cccccCCCceEEEecCCC-----------------------CceeecCHHHHHHHHHHHHHHHHccchhhhhhcCCCCCC
Confidence 322 11111111100 000112221 11111111112211 0000000
Q ss_pred -------cCCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcccc----------cc
Q 010542 173 -------EHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL----------LP 234 (507)
Q Consensus 173 -------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~----------~~ 234 (507)
...++.++.++++.... .++.. .+.++.++ ...++.+++.+++..+..... ..
T Consensus 174 ~~~~~~~~~~~~~s~~~~l~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 244 (495)
T 2vvm_A 174 MFYVPEFRKYDEMSYSERIDQIRD--------ELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDC 244 (495)
T ss_dssp TTSSTTHHHHHTSBHHHHHHHHGG--------GCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHH
T ss_pred cccCcchhhhhhhhHHHHHHHhhc--------cCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhh
Confidence 00124567776653310 02222 23344443 345666777777654432110 01
Q ss_pred CCccccccchHHHHHHHhc-----c-CCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCC
Q 010542 235 GGHGLMVRGYLPVINTLAK-----G-LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRL 308 (507)
Q Consensus 235 ~~~~~~~~G~~~l~~~l~~-----g-~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l 308 (507)
.+...+.+|++.++++|.+ | ++|+++++|++|..+++++.|++.+|+++.||+||+|+|+..+.. +.+.|+|
T Consensus 245 ~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~l 322 (495)
T 2vvm_A 245 LMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPAL 322 (495)
T ss_dssp HHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCC
T ss_pred hceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCC
Confidence 2345678999999998865 4 679999999999998888999999998899999999999998875 3477899
Q ss_pred cHHHHHHHHHcCCcceeEEEEEccCCCCCCCccceeecCCCCceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHH
Q 010542 309 PDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAA 388 (507)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~ 388 (507)
|+...+++..+.+....++++.|+.++|+ ++.|...........+.+...+++..+++++.... . .+++++..
T Consensus 323 p~~~~~ai~~~~~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~-~----~~~~~e~~ 395 (495)
T 2vvm_A 323 STERISAMQAGHVSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSA-N----HIQPDEDV 395 (495)
T ss_dssp CHHHHHHHHHCCCCCCEEEEEEESCGGGG--GEEEEECSSCSSCEEEEEEECTTSCEEEEEEECST-T----CCCTTTCH
T ss_pred CHHHHHHHHhcCCCceeEEEEEECCccCC--CceeEecCCCCcEEEecCCCCCCCCeEEEEEeCcc-c----cCCCHHHH
Confidence 99999999999999999999999999984 45565443333333444444456667777766432 1 14566778
Q ss_pred HHHHHHHHHhCCCCCCCcEEEeccCCCCCCCCcccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHH
Q 010542 389 NFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGL 468 (507)
Q Consensus 389 ~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~ 468 (507)
+.++++|++++|+...|..+.+++|..++++.|+|.+..+|......+.+.+|.++|||||++++..++||||||+.||.
T Consensus 396 ~~~~~~L~~~~~~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~ 475 (495)
T 2vvm_A 396 RETLKAVGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGT 475 (495)
T ss_dssp HHHHHHHHTTSTTSCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHH
Confidence 89999999999986778888899999999999999888888876678888999999999999999777799999999999
Q ss_pred HHHHHHHHHH
Q 010542 469 MAAEDCRMRV 478 (507)
Q Consensus 469 ~aA~~i~~~l 478 (507)
+||++|++.+
T Consensus 476 raA~~i~~~l 485 (495)
T 2vvm_A 476 RAARVVLEEL 485 (495)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998766
No 6
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=6.5e-42 Score=363.81 Aligned_cols=447 Identities=31% Similarity=0.481 Sum_probs=295.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (507)
...+||+|||||++||+||++|+++|++|+|||+++++||++.+.+..++.+|.|++++++. ..+.+..+.+++|++..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~l~~~lg~~~~ 354 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL-GGNPMAVVSKQVNMELA 354 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEETTEEEESSCCEECCS-BTCHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecccccchhcCceEecCC-CCchHHHHHHHhCCchh
Confidence 45789999999999999999999999999999999999999999888899999999998764 34567788899999765
Q ss_pred eecCCCcccccccchh---------hhhhhhh---hHHhhhcccceeecCCCCccCH-HHHHHHH--------HHHHHHH
Q 010542 106 RTSGDNSVLYDHDLES---------RVLKTVV---VSLIQANLCYALFDMDGNQVPQ-ELVTKVG--------EAFESIL 164 (507)
Q Consensus 106 ~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~ 164 (507)
.......++...+... ..+.... ..+..... .... ....... .....+. ..+....
T Consensus 355 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~-~~~~--~~~~~slg~~~e~v~~~~er~~~~e~l~~~ 431 (852)
T 2xag_A 355 KIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLD-FNVL--NNKPVSLGQALEVVIQLQEKHVKDEQIEHW 431 (852)
T ss_dssp ECCCCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHTSC-CCEE--TTEECBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccceEEecCCccccchhhhhhhhhhhhhHHHHHHHhhhhh-hhcc--cCCCccHHHHHHHhhhhhhhhcchhHHHHh
Confidence 4432222221111100 0000000 00000000 0000 0111111 1111100 0111111
Q ss_pred HHHHHHhh---cCC-----CCCcHHHHHHH----------------------------HhccChhHHh------------
Q 010542 165 KETDKVRE---EHD-----EDMSIQRAISI----------------------------VFDRRPELRL------------ 196 (507)
Q Consensus 165 ~~~~~~~~---~~~-----~~~~~~~~~~~----------------------------~~~~~~~l~~------------ 196 (507)
..+..... ... ....+.++... .+..+..+..
T Consensus 432 ~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~e~s~rs~~~~l~~~~~~~~~l~~~~~~l~~~l~~l 511 (852)
T 2xag_A 432 KKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQEL 511 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchhhhhhhhhhhhHHHHHHHHhhhhhhhhhHHHHHHhh
Confidence 10000000 000 00000000000 0000000000
Q ss_pred ----------hhhHHHHHHHHHHhhhccccCCcccccccccCcc--ccccCCccccccchHHHHHHHhccCCcccCceeE
Q 010542 197 ----------EGLAHKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVT 264 (507)
Q Consensus 197 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~G~~~l~~~l~~g~~i~~~~~V~ 264 (507)
......++++++..+....+...+.+++..+... ....+.+..+.+||+.|+++|.++++|++|++|+
T Consensus 512 ~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~ 591 (852)
T 2xag_A 512 EANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVR 591 (852)
T ss_dssp HHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEE
T ss_pred hccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEE
Confidence 0001112222222121222334445555444322 1234556788999999999999999999999999
Q ss_pred EEEeeCCcEEEEEcC------CcEEEcCEEEEecCchhhccC--cccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCC
Q 010542 265 KITRHYIGVKVTVEG------GKTFVADAVVVAVPLGVLKAR--TIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 336 (507)
Q Consensus 265 ~I~~~~~~v~v~~~~------g~~~~ad~VI~a~p~~~~~~l--~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 336 (507)
+|...+++|.|++.+ |+++.||+||+|+|+..+..+ .+.|.|+||+...+++..++++...|+++.|+++||
T Consensus 592 ~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW 671 (852)
T 2xag_A 592 QVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFW 671 (852)
T ss_dssp EEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCS
T ss_pred EEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCccc
Confidence 999999999988765 568999999999999998763 367899999999999999999999999999999999
Q ss_pred CC-CccceeecCCC----CceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEE
Q 010542 337 PN-VEFLGVVSDTS----YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYL 409 (507)
Q Consensus 337 ~~-~~~~g~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~--~~~~~~~~ 409 (507)
++ .+.+|.+.... ....++.. . +..+|++++.+..+..+..++++++++.++++|.++|+. ..+|..+.
T Consensus 672 ~~~~~~fG~l~~~~~~~~~l~~~~~~-~---~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~ 747 (852)
T 2xag_A 672 DPSVNLFGHVGSTTASRGELFLFWNL-Y---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETV 747 (852)
T ss_dssp CTTCCEEEECCSSSTTTTTTCEEEEC-S---SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEE
T ss_pred CCCCCeeeeeccccCCCCceEEEecC-C---CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEE
Confidence 85 35566653321 11222222 2 345888888888888888999999999999999999976 34788999
Q ss_pred eccCCCCCCCCcccccCCCCCchHHHHHhcCCC-------------CceEEeeccccCcCCchhhHHHHHHHHHHHHHHH
Q 010542 410 VSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 476 (507)
Q Consensus 410 ~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------------~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~ 476 (507)
+.+|..++++.|+|++..+|......+.+..|+ ++|||||++++..++|||+||+.||.+||++|++
T Consensus 748 vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~ 827 (852)
T 2xag_A 748 VSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIAD 827 (852)
T ss_dssp ECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999888988766666666654 6899999999987889999999999999999998
Q ss_pred HHHH
Q 010542 477 RVLE 480 (507)
Q Consensus 477 ~l~~ 480 (507)
.+..
T Consensus 828 ~l~~ 831 (852)
T 2xag_A 828 QFLG 831 (852)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 7743
No 7
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=6.8e-43 Score=359.50 Aligned_cols=425 Identities=28% Similarity=0.391 Sum_probs=281.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCCCCCceeEeccC-CCeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGGRVHTDYS-FGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
+.+||+|||||++||+||++|+++| ++|+|||+++++|||++|... .|+.+|+|++++++. ..+.+.+++.++|+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~-~~~~~~~~~~~lg~~~ 85 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDT-LTNPLFLEEAQLSLND 85 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCT-TTCHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecC-CCChHHHHHHHhCCCC
Confidence 4579999999999999999999999 999999999999999999876 799999999999753 2446777777777621
Q ss_pred ----eeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcH
Q 010542 105 ----YRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSI 180 (507)
Q Consensus 105 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (507)
..........+..+. .... ......+ ....+.+.++...... .....++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~-------------------~~~~---~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~d~s~ 141 (516)
T 1rsg_A 86 GRTRFVFDDDNFIYIDEER-------------------GRVD---HDKELLL-EIVDNEMSKFAELEFH-QHLGVSDCSF 141 (516)
T ss_dssp CCCCEECCCCCCEEEETTT-------------------EECT---TCTTTCH-HHHHHHHHHHHHHHC--------CCBH
T ss_pred cceeEEECCCCEEEEcCCC-------------------cccc---ccHHHHH-HHHHHHHHHHHHHHhh-hccCCCCCCH
Confidence 111111111111100 0000 0000111 1111112222111100 0112456788
Q ss_pred HHHHHHHhccC-hhHHhhhhHHHHHHHHHHhhhccccCCcccccccccCccccccCCccccccchHHHHHHHhccC---C
Q 010542 181 QRAISIVFDRR-PELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGL---D 256 (507)
Q Consensus 181 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~g~---~ 256 (507)
.+++..++... ..+. ....+++..++..+..+++.++..++...+... ..+...++.+ ++.++++|.+.+ +
T Consensus 142 ~~~l~~~l~~~~~~l~--~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~--~~~~~~~~~g-~~~l~~~l~~~l~~~~ 216 (516)
T 1rsg_A 142 FQLVMKYLLQRRQFLT--NDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG--HQGRNAFALN-YDSVVQRIAQSFPQNW 216 (516)
T ss_dssp HHHHHHHHHHHGGGSC--HHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC--CSSCCEEESC-HHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHHhhcccC--HHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh--ccCcchhhhC-HHHHHHHHHHhCCCCE
Confidence 88877654421 0000 001122222222223345555556555443221 2233334555 999999998855 5
Q ss_pred cccCceeEEEEee-CCcEEEEEcCCcEEEcCEEEEecCchhhccC---------cccccCCCcHHHHHHHHHcCCcceeE
Q 010542 257 IRLGHRVTKITRH-YIGVKVTVEGGKTFVADAVVVAVPLGVLKAR---------TIKFEPRLPDWKEAAIDDLGVGIENK 326 (507)
Q Consensus 257 i~~~~~V~~I~~~-~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l---------~~~~~p~l~~~~~~~~~~~~~~~~~~ 326 (507)
|++|++|++|..+ ++++.|++.+|+++.||+||+|+|+..+... .+.|.|+||+...+++.+++++...|
T Consensus 217 i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~K 296 (516)
T 1rsg_A 217 LKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGK 296 (516)
T ss_dssp EETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEE
T ss_pred EEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceE
Confidence 9999999999986 6679999999988999999999999988642 36788999999999999999999999
Q ss_pred EEEEccCCCCCCC--ccceeecCCC--------------------------------C-ceeeeeccccCCCceEEEEEe
Q 010542 327 IIMHFDKVFWPNV--EFLGVVSDTS--------------------------------Y-GCSYFLNLHKATGHCVLVYMP 371 (507)
Q Consensus 327 ~~l~~~~~~~~~~--~~~g~~~~~~--------------------------------~-~~~~~~~~~~~~~~~~l~~~~ 371 (507)
+++.|+++||++. .+.+....+. + ....+.+.....+..+|++++
T Consensus 297 v~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 376 (516)
T 1rsg_A 297 VIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLM 376 (516)
T ss_dssp EEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEEEE
T ss_pred EEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEEEe
Confidence 9999999999864 2222211110 0 001111222344667888999
Q ss_pred ccchhHHHhcC--CHHHHHH---HHHHHHHHhCC------CCCC---------Cc--EEEeccCCCCCCCCcccccCCCC
Q 010542 372 AGQLARDIEKM--SDEAAAN---FAFTQLKKILP------DASS---------PI--QYLVSHWGTDANSLGSYSYDTVG 429 (507)
Q Consensus 372 ~~~~~~~~~~~--~~ee~~~---~~~~~L~~~~p------~~~~---------~~--~~~~~~w~~~~~~~g~~~~~~~~ 429 (507)
.+..+..+..+ +++++.+ .++++|.++|+ ++.. |. .+...+|..+|++.|+|++..||
T Consensus 377 ~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g 456 (516)
T 1rsg_A 377 QAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPG 456 (516)
T ss_dssp CBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC-
T ss_pred cchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCC
Confidence 99888888888 8888765 47777777664 3322 44 78889999999999999988788
Q ss_pred Cch-HHHHHhc-CCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 010542 430 KSH-DLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 481 (507)
Q Consensus 430 ~~~-~~~~~~~-~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l~~~ 481 (507)
... ...+.+. .+.++|||||++++..++|||+||+.||.+||++|++.+..+
T Consensus 457 ~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 457 DDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp ---CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 743 3445554 577899999999998778999999999999999999987654
No 8
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=9.4e-41 Score=340.05 Aligned_cols=424 Identities=30% Similarity=0.458 Sum_probs=287.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCCCCCceeEeccCCCeeeecCCceeeCCC--CCCchHHHHHh-cCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVC--QENPLAPVISR-LGL 102 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~--~~~~~~~l~~~-lg~ 102 (507)
+.+||+|||||++||+||+.|++.|+ +|+|+|+++++||++++....|+.+|.|++++++.. ..+.+.+++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 46899999999999999999999998 899999999999999998889999999999997432 34568999999 999
Q ss_pred CeeeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHH---HHHHHHHHHHH-hhcCCCCC
Q 010542 103 PLYRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEA---FESILKETDKV-REEHDEDM 178 (507)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~ 178 (507)
........... ...+..++..++.......... +..+....... .....+++
T Consensus 83 ~~~~~~~~~~~------------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (472)
T 1b37_A 83 RNFRSDFDYLA------------------------QNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDM 138 (472)
T ss_dssp CEEECCCTTGG------------------------GCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCC
T ss_pred ceeeccCcccc------------------------ceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhh
Confidence 86432211100 0111112222222211111111 11111111111 11123445
Q ss_pred cHHH--HHHHHhccChhHHhhhhHHHHHHHHHHhhhccccCCcccccccccCccc---cccCCccc--cccchHHHHHHH
Q 010542 179 SIQR--AISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEE---LLPGGHGL--MVRGYLPVINTL 251 (507)
Q Consensus 179 ~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~---~~~~~~~~--~~~G~~~l~~~l 251 (507)
++.+ ++........ ...-+.+++.+... ..++.+....++..+.... ...+...+ ..+|++.++++|
T Consensus 139 s~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l 212 (472)
T 1b37_A 139 SILAMQRLNEHQPNGP----ATPVDMVVDYYKFD--YEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYL 212 (472)
T ss_dssp BHHHHHHHHHTSSSSC----CSHHHHHHHHHHTH--HHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHH
T ss_pred hHHHHHHHhhhccccc----ccHHHHHHHHHHHh--hhhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHH
Confidence 5543 2211110000 00001122222211 1123344444443322110 01111122 368999999998
Q ss_pred hcc-------------CCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHH
Q 010542 252 AKG-------------LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 318 (507)
Q Consensus 252 ~~g-------------~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~ 318 (507)
.+. .+|+++++|++|..++++++|++.+|++++||+||+|+|+..+..+++.+.|+||+...+++.+
T Consensus 213 ~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~ 292 (472)
T 1b37_A 213 AGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQ 292 (472)
T ss_dssp HHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHH
T ss_pred HHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHh
Confidence 753 4799999999999999999999999989999999999999998876677889999999999999
Q ss_pred cCCcceeEEEEEccCCCCCCCccceeec--CCC-Cceeeeeccc-cCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHH
Q 010542 319 LGVGIENKIIMHFDKVFWPNVEFLGVVS--DTS-YGCSYFLNLH-KATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQ 394 (507)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~ 394 (507)
+++....|+++.|+.++|++....+++. +.. .....+.... ..++..++++++.+..+..|..++++++.+.++++
T Consensus 293 ~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~ 372 (472)
T 1b37_A 293 FDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQV 372 (472)
T ss_dssp SEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHH
T ss_pred cCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999998632112211 111 1111222111 12345666666666556678888999999999999
Q ss_pred HHHhCCC--CCCCcEEEeccCCCCCCCCcccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHH
Q 010542 395 LKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAE 472 (507)
Q Consensus 395 L~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~ 472 (507)
|++++|+ ..+|..+.+.+|..++++.|+|....+|+.....+.+.+|++||||||+++++.++|+|+||+.||.+||+
T Consensus 373 L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~ 452 (472)
T 1b37_A 373 LRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAE 452 (472)
T ss_dssp HHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHH
Confidence 9999976 45778888899999999999998777888766678899999999999999998777999999999999999
Q ss_pred HHHHHHHH
Q 010542 473 DCRMRVLE 480 (507)
Q Consensus 473 ~i~~~l~~ 480 (507)
+|++.+..
T Consensus 453 ~i~~~l~~ 460 (472)
T 1b37_A 453 ILINCAQK 460 (472)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987754
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=2.3e-40 Score=339.85 Aligned_cols=431 Identities=21% Similarity=0.287 Sum_probs=284.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEecc--CCCeeeecCCceeeCCCCCCchHHHHHhcCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDY--SFGFPVDLGASWLHGVCQENPLAPVISRLGLP 103 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~--~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (507)
...+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+|.|+++++. ....+.++++++|+.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~g~~ 108 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPE--KHRIVREYIRKFDLR 108 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEET--TCHHHHHHHHHTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccc--hHHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999999999999998876 568999999999863 355788999999998
Q ss_pred eeeecC--CCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHH----hhcCCCC
Q 010542 104 LYRTSG--DNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKV----REEHDED 177 (507)
Q Consensus 104 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 177 (507)
...... ........+....... ....+....+.+...........+ ....+.++...+... .....++
T Consensus 109 ~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (498)
T 2iid_A 109 LNEFSQENDNAWYFIKNIRKKVGE---VKKDPGLLKYPVKPSEAGKSAGQL---YEESLGKVVEELKRTNCSYILNKYDT 182 (498)
T ss_dssp EEEECSCCTTSEEEETTEEEEHHH---HHHCGGGGCCCCCGGGTTCCHHHH---HHHHTHHHHHHHHHSCHHHHHHHHTT
T ss_pred ceeecccCCccEEEeCCeeecccc---cccCccccccCCCccccCCCHHHH---HHHHHHHHHHHHhhccHHHHHHHhhh
Confidence 643321 2222221111100000 000000000000000000000111 111111211111110 0011234
Q ss_pred CcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhhhc---cccCCcccccccccCccccccCCccccccchHHHHHHHhcc
Q 010542 178 MSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEG---WFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKG 254 (507)
Q Consensus 178 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~g 254 (507)
.++.+++.... .++...++.+...+.. ++......+... ...........+.+|++.++++|.+.
T Consensus 183 ~s~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gG~~~l~~~l~~~ 250 (498)
T 2iid_A 183 YSTKEYLIKEG---------DLSPGAVDMIGDLLNEDSGYYVSFIESLKHD---DIFAYEKRFDEIVDGMDKLPTAMYRD 250 (498)
T ss_dssp SBHHHHHHHTS---------CCCHHHHHHHHHHTTCGGGTTSBHHHHHHHH---HHHTTCCCEEEETTCTTHHHHHHHHH
T ss_pred hhHHHHHHHcc---------CCCHHHHHHHHHhcCcccchhHHHHHHHHHH---hccccCcceEEeCCcHHHHHHHHHHh
Confidence 56666665321 1222222222111110 000000000000 00001223457889999999999886
Q ss_pred C--CcccCceeEEEEeeCCcEEEEEcCCc----EEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEE
Q 010542 255 L--DIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKII 328 (507)
Q Consensus 255 ~--~i~~~~~V~~I~~~~~~v~v~~~~g~----~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 328 (507)
+ +|++|++|++|..++++|.|++.+|+ +++||+||+|+|+..+. .+.|.|+||+...+++.++++.+..|++
T Consensus 251 l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~ 328 (498)
T 2iid_A 251 IQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIF 328 (498)
T ss_dssp TGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEE
T ss_pred cccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEE
Confidence 5 89999999999999999999888775 48999999999998875 4567789999999999999999999999
Q ss_pred EEccCCCCCCCccceee-c-CCCCceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCC--
Q 010542 329 MHFDKVFWPNVEFLGVV-S-DTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASS-- 404 (507)
Q Consensus 329 l~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~-- 404 (507)
+.|+.+||++.++.|.. . .......++.+...+++..+|++++.+..+..+..++++++.+.++++|+++++....
T Consensus 329 l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~ 408 (498)
T 2iid_A 329 LTCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDI 408 (498)
T ss_dssp EEESSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred EEeCCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhh
Confidence 99999999865443321 1 1122223333333466677888888777777788899999999999999999973211
Q ss_pred ---CcEEEeccCCCCCCCCcccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHHH
Q 010542 405 ---PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 479 (507)
Q Consensus 405 ---~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l~ 479 (507)
...+.+.+|..++++.|+|.+..+++.....+.+.+|.+||||||++++..+ |||+||+.||.+||++|++.+.
T Consensus 409 ~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 409 QSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp HHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHHHHHHHHHHHHHHHHhc
Confidence 1236688999999999999877788776777888999999999999998655 8999999999999999998774
No 10
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=5.5e-40 Score=331.05 Aligned_cols=402 Identities=23% Similarity=0.301 Sum_probs=277.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCC---CeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSF---GFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~---g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
++||+|||||++||+||++|+++|++|+|||+++++||++.+.... |..++.|++++... ....+.++++++|++.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~-~~~~~~~~~~~~g~~~ 79 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRK-HHPRLAAELDRYGIPT 79 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTT-TCHHHHHHHHHHTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCC-CcHHHHHHHHHhCCee
Confidence 3799999999999999999999999999999999999999887666 89999999988632 1456788899999986
Q ss_pred eeecCCCcccc-cccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhc--------CC
Q 010542 105 YRTSGDNSVLY-DHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREE--------HD 175 (507)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 175 (507)
..........+ ..+.. +... ...+..........+.++......+... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~-------------------~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 138 (431)
T 3k7m_X 80 AAASEFTSFRHRLGPTA-------------------VDQA--FPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLED 138 (431)
T ss_dssp EECCCCCEECCBSCTTC-------------------CSSS--SCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGG
T ss_pred eecCCCCcEEEEecCCe-------------------ecCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhh
Confidence 55433322222 11000 0000 0012222233333334443333222110 00
Q ss_pred CCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHh-hhccccCCcccccccccCcccccc---------CCccccccchH
Q 010542 176 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEELLP---------GGHGLMVRGYL 245 (507)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~---------~~~~~~~~G~~ 245 (507)
.+.++.+++.... ..... ..++.. ....++.+...++...+....... .....+.+|++
T Consensus 139 ~d~s~~~~l~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 207 (431)
T 3k7m_X 139 LDIPLNEYVDKLD----------LPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSA 207 (431)
T ss_dssp GCSBHHHHHHHHT----------CCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTH
T ss_pred hcCCHHHHHHhcC----------CCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHH
Confidence 1266777665321 11111 111222 233455555555544332111111 11115689999
Q ss_pred HHHHHHhccC-CcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcce
Q 010542 246 PVINTLAKGL-DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIE 324 (507)
Q Consensus 246 ~l~~~l~~g~-~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~ 324 (507)
.+++++.+.. +|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.. +.+.|++|+...+++..+.+...
T Consensus 208 ~l~~~~~~~~g~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~ 285 (431)
T 3k7m_X 208 DLVDAMSQEIPEIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQG 285 (431)
T ss_dssp HHHHHHHTTCSCEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCE
T ss_pred HHHHHHHhhCCceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcce
Confidence 9999998622 99999999999999999999999998899999999999998874 46789999999999999999888
Q ss_pred eEEEEEccCCCCCCCccceeecCCCCceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCC
Q 010542 325 NKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASS 404 (507)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~ 404 (507)
.++.+.|+.+++ ++.+ ..+......+.......+..+++.+..+.. +...+. +.+.+.|++++|+..
T Consensus 286 ~kv~~~~~~~~~---~i~~--~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~~----~~~~~~l~~~~~~~~- 352 (431)
T 3k7m_X 286 LKILIHVRGAEA---GIEC--VGDGIFPTLYDYCEVSESERLLVAFTDSGS---FDPTDI----GAVKDAVLYYLPEVE- 352 (431)
T ss_dssp EEEEEEEESCCT---TEEE--EBSSSSSEEEEEEECSSSEEEEEEEEETTT---CCTTCH----HHHHHHHHHHCTTCE-
T ss_pred EEEEEEECCCCc---CceE--cCCCCEEEEEeCcCCCCCCeEEEEEecccc---CCCCCH----HHHHHHHHHhcCCCC-
Confidence 999999998874 2333 122222223333222245667777776554 222222 346678888998765
Q ss_pred CcEEEeccCCCCCCCCcccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHH
Q 010542 405 PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 477 (507)
Q Consensus 405 ~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~ 477 (507)
|..+..++|..++++.|+|++..||+.....+.+.+|.++|||||++++..++|||+||+.||.+||++|+..
T Consensus 353 ~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 353 VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 7888889999999999999988899877888889999999999999999888899999999999999999863
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.4e-39 Score=332.05 Aligned_cols=406 Identities=18% Similarity=0.262 Sum_probs=278.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC------CeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS------FKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRL 100 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G------~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~l 100 (507)
+++||+|||||++||+||++|+++| ++|+|||+++++||+++|....|+.+|.|++++.+ .+..+.++++++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~--~~~~~~~l~~~l 81 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLE--RKKSAPQLVKDL 81 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEET--TCTHHHHHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhh--CCHHHHHHHHHc
Confidence 4589999999999999999999999 99999999999999999988899999999998874 356789999999
Q ss_pred CCCeeeec--CCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHH-------HHHHHHHHHHHHHh
Q 010542 101 GLPLYRTS--GDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVG-------EAFESILKETDKVR 171 (507)
Q Consensus 101 g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 171 (507)
|++..... ....+++..+.... ++. ......+..+..... ..+....... ...
T Consensus 82 gl~~~~~~~~~~~~~~~~~g~~~~-~~~----------------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 143 (470)
T 3i6d_A 82 GLEHLLVNNATGQSYVLVNRTLHP-MPK----------------GAVMGIPTKIAPFVSTGLFSLSGKARAAMDFI-LPA 143 (470)
T ss_dssp TCCTTEEECCCCCEEEECSSCEEE-CCC-------------------------------------CCSHHHHHHHH-SCC
T ss_pred CCcceeecCCCCccEEEECCEEEE-CCC----------------CcccCCcCchHHhhccCcCCHHHHHHHhcCcc-cCC
Confidence 99743221 22222222211000 000 000000000000000 0001111111 011
Q ss_pred hcCCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCccc---------cc--------
Q 010542 172 EEHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEE---------LL-------- 233 (507)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~---------~~-------- 233 (507)
....++.++.++++. .++.+..+.++.++ .+.++.+++.+++....... ..
T Consensus 144 ~~~~~~~s~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (470)
T 3i6d_A 144 SKTKDDQSLGEFFRR-----------RVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRP 212 (470)
T ss_dssp CSSSSCCBHHHHHHH-----------HSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------
T ss_pred CCCCCCcCHHHHHHH-----------hcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcc
Confidence 223457788888763 34556666666654 45777777777754322110 00
Q ss_pred -----------cCCccccccchHHHHHHHhccC---CcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhcc
Q 010542 234 -----------PGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKA 299 (507)
Q Consensus 234 -----------~~~~~~~~~G~~~l~~~l~~g~---~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~ 299 (507)
.+....+.+|++.++++|.+.+ +|+++++|++|+.+++++.|++.+|+++.||+||+|+|+..+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~ 292 (470)
T 3i6d_A 213 QGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG 292 (470)
T ss_dssp --------------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH
T ss_pred ccccccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH
Confidence 1234567899999999999866 79999999999999999999999998999999999999998775
Q ss_pred CcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCC-ccceeecCCCCc---e-eeee----ccccCCCceEEEEE
Q 010542 300 RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVSDTSYG---C-SYFL----NLHKATGHCVLVYM 370 (507)
Q Consensus 300 l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~~~~---~-~~~~----~~~~~~~~~~l~~~ 370 (507)
++. .++ ..+.+..+++.+..++++.|++++|+.. ...|++.+.... . ..+. +...+++..+++++
T Consensus 293 l~~--~~~----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~ 366 (470)
T 3i6d_A 293 MLS--ELP----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAY 366 (470)
T ss_dssp HTT--TST----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEE
T ss_pred HcC--Cch----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEE
Confidence 432 222 2577889999999999999999999743 345655443211 0 1111 22345667788888
Q ss_pred eccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEeccCCCCCCCCcccccCCCCCc---hHHHHHhcCCCCceEE
Q 010542 371 PAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKS---HDLYERLRIPVDNLFF 447 (507)
Q Consensus 371 ~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~l~~ 447 (507)
+.+.....+..++++++++.++++|.+++|...+|..+.+++|... .+.| .+|.. ....+.+.++.+|||+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~ 440 (470)
T 3i6d_A 367 VGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHES---MPQY---HVGHKQRIKELREALASAYPGVYM 440 (470)
T ss_dssp ECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEE---EEEC---BTTHHHHHHHHHHHHHHHSTTEEE
T ss_pred ECCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCc---cCCC---CCCHHHHHHHHHHHHHhhCCCEEE
Confidence 7776666778899999999999999999998778888889999542 2222 23432 3344556677899999
Q ss_pred eeccccCcCCchhhHHHHHHHHHHHHHHHHH
Q 010542 448 AGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 478 (507)
Q Consensus 448 aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l 478 (507)
||+++.+ .++++|+.||.++|++|++.|
T Consensus 441 aG~~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 441 TGASFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp CSTTTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 9998754 579999999999999998876
No 12
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=1.2e-38 Score=326.29 Aligned_cols=424 Identities=21% Similarity=0.246 Sum_probs=270.5
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccC-----------------CCeeeecCCceeeCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS-----------------FGFPVDLGASWLHGV 87 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~-----------------~g~~~d~G~~~~~~~ 87 (507)
..+.+||+|||||++||+||+.|+++|++|+|||+++++||++++... .|..+|.|+++++.
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 86 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQ- 86 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEET-
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhccc-
Confidence 345789999999999999999999999999999999999999988654 57789999998874
Q ss_pred CCCCchHHHHHhcCCCeeeecCC--Ccccc-cccchhhhhhhhhhHHhhhcccceeecCCCCccCHH-HHHHHHHHHHHH
Q 010542 88 CQENPLAPVISRLGLPLYRTSGD--NSVLY-DHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQE-LVTKVGEAFESI 163 (507)
Q Consensus 88 ~~~~~~~~l~~~lg~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 163 (507)
.+ .+.++++++|++....... ...++ ..+. . . .+...... ........+..+
T Consensus 87 -~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~--~-------------------~g~~~~~~~~~~~~~~~~~~l 142 (489)
T 2jae_A 87 -SH-ITLDYCRELGVEIQGFGNQNANTFVNYQSDT-S--L-------------------SGQSVTYRAAKADTFGYMSEL 142 (489)
T ss_dssp -TS-THHHHHHHHTCCEEEECCCCTTSEEECCCSS-T--T-------------------TTCCEEHHHHHHHHHHHHHHH
T ss_pred -HH-HHHHHHHHcCCceEEccccCCCceEEecCCc-c--c-------------------CCccccHHHHhhhhhccHHHH
Confidence 33 7899999999986543321 12221 1100 0 0 01111100 000000011111
Q ss_pred HHHHHHHhh-cC----CCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHh-hhc-cccC-----CcccccccccCcc-
Q 010542 164 LKETDKVRE-EH----DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEG-WFAA-----DAETISLKSWDKE- 230 (507)
Q Consensus 164 ~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~-~~~~-----~~~~~s~~~~~~~- 230 (507)
......... .. .++.++.+++..+-... ....+.......++.. ... +.+. +...++...+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (489)
T 2jae_A 143 LKKATDQGALDQVLSREDKDALSEFLSDFGDLS---DDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNF 219 (489)
T ss_dssp HHHHHHHTTTTTTSCHHHHHHHHHHHHHHTTCC---TTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTG
T ss_pred HHHHHhccccccccchhhHHHHHHHHHHhhhhh---hccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHH
Confidence 111111000 00 01124444444310000 0000000000000000 000 0000 1111111111100
Q ss_pred -----ccccCCccccccchHHHHHHHhcc---CCcccCceeEEEEeeCCcEEEEEcCC---cEEEcCEEEEecCchhhcc
Q 010542 231 -----ELLPGGHGLMVRGYLPVINTLAKG---LDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLGVLKA 299 (507)
Q Consensus 231 -----~~~~~~~~~~~~G~~~l~~~l~~g---~~i~~~~~V~~I~~~~~~v~v~~~~g---~~~~ad~VI~a~p~~~~~~ 299 (507)
........++.+|++.++++|.+. .+|++|++|++|..++++|+|++.+| +++.||+||+|+|+..+..
T Consensus 220 ~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~ 299 (489)
T 2jae_A 220 SFDFGYDQAMMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR 299 (489)
T ss_dssp GGGGCTTTSSSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT
T ss_pred hhhhccccCccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh
Confidence 011234567899999999999874 57999999999999999999988877 5899999999999998765
Q ss_pred CcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCC-ccceee-cCCCCce-eeeeccccCCCceEEE-EEeccch
Q 010542 300 RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVV-SDTSYGC-SYFLNLHKATGHCVLV-YMPAGQL 375 (507)
Q Consensus 300 l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~~ 375 (507)
+. + ++|+...+.+.++++.+..++++.|++++|++. ++.|.+ ....... .++.+...+....+++ +++.+..
T Consensus 300 l~--~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~ 375 (489)
T 2jae_A 300 LQ--N--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKR 375 (489)
T ss_dssp SE--E--CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHH
T ss_pred Cc--c--CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCch
Confidence 32 2 688888999999999999999999999999754 445432 2221122 2222221111234444 5777777
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHhCCC-C-CCCcEEEeccCCCCCCCCcccccCC------CCCchHHHHHhcCCCCceEE
Q 010542 376 ARDIEKMSDEAAANFAFTQLKKILPD-A-SSPIQYLVSHWGTDANSLGSYSYDT------VGKSHDLYERLRIPVDNLFF 447 (507)
Q Consensus 376 ~~~~~~~~~ee~~~~~~~~L~~~~p~-~-~~~~~~~~~~w~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~l~~ 447 (507)
...|..++++++++.++++|++++|. . ..+......+|..+++..|+|.... ++......+.+.+|.+||||
T Consensus 376 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f 455 (489)
T 2jae_A 376 QEAFESLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYF 455 (489)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEE
Confidence 77888999999999999999999987 3 4566677788999999988887554 67666677888899999999
Q ss_pred eeccccCcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 010542 448 AGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 481 (507)
Q Consensus 448 aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l~~~ 481 (507)
||++++. +.++++||+.||.+||++|+..+..+
T Consensus 456 aG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 456 AGDHLSN-AIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp CSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred eEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999874 44899999999999999999887643
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=5.8e-39 Score=327.91 Aligned_cols=409 Identities=20% Similarity=0.223 Sum_probs=271.4
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
....+||+|||||++||+||+.|+++|++|+|||+++++||+++|....|+.+|.|++++.+ .+..+.++++++|+..
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~--~~~~~~~~~~~~gl~~ 90 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLD--REPATRALAAALNLEG 90 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEET--TCHHHHHHHHHTTCGG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhh--hhHHHHHHHHHcCCcc
Confidence 35578999999999999999999999999999999999999999998899999999999974 3567889999999963
Q ss_pred eee--c--CCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcH
Q 010542 105 YRT--S--GDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSI 180 (507)
Q Consensus 105 ~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (507)
... . ....+++.++.... ++.... .++.. ..+. + ...+ +++...........++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~-~p~~~~---------~~~~~--~~~~--~----~~~~-~~~~~~~~~~~~~~~~~s~ 151 (478)
T 2ivd_A 91 RIRAADPAAKRRYVYTRGRLRS-VPASPP---------AFLAS--DILP--L----GARL-RVAGELFSRRAPEGVDESL 151 (478)
T ss_dssp GEECSCSSCCCEEEEETTEEEE-CCCSHH---------HHHTC--SSSC--H----HHHH-HHHGGGGCCCCCTTCCCBH
T ss_pred eeeecCccccceEEEECCEEEE-CCCCHH---------HhccC--CCCC--H----HHHH-HHhhhhhcCCCCCCCCCCH
Confidence 211 1 11222222111000 000000 00000 0000 0 0001 1111110001112457789
Q ss_pred HHHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcc----------------------------c
Q 010542 181 QRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKE----------------------------E 231 (507)
Q Consensus 181 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~----------------------------~ 231 (507)
.++++.. +++++.+.++.++ ...++.+++.+++..+... .
T Consensus 152 ~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (478)
T 2ivd_A 152 AAFGRRH-----------LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPA 220 (478)
T ss_dssp HHHHHHH-----------TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----
T ss_pred HHHHHHh-----------hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcc
Confidence 9888742 4555666655554 3466666666664432100 0
Q ss_pred ccc----CCccccccchHHHHHHHhc--cCCcccCceeEEEEeeCCcEEEEE---cCCcEEEcCEEEEecCchhhccCcc
Q 010542 232 LLP----GGHGLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPLGVLKARTI 302 (507)
Q Consensus 232 ~~~----~~~~~~~~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~v~~---~~g~~~~ad~VI~a~p~~~~~~l~~ 302 (507)
... ++..++.+|++.++++|.+ |++|+++++|++|..+++++.|++ .+|+++.||+||+|+|+..+..+
T Consensus 221 ~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l-- 298 (478)
T 2ivd_A 221 GTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKL-- 298 (478)
T ss_dssp CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHH--
T ss_pred cccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHH--
Confidence 001 4567889999999999987 559999999999999888888888 67778999999999999887643
Q ss_pred cccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCCccceeecCC----CCceeeeecc----ccCCCceEEEEEeccc
Q 010542 303 KFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDT----SYGCSYFLNL----HKATGHCVLVYMPAGQ 374 (507)
Q Consensus 303 ~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~----~~~~~~~~l~~~~~~~ 374 (507)
.|++|+...+.+.++++.+..++++.|+.++|+.....+.+.+. ......+.+. ..+++..++++++.+.
T Consensus 299 --l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~ 376 (478)
T 2ivd_A 299 --LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGA 376 (478)
T ss_dssp --HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECT
T ss_pred --hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCc
Confidence 25688888899999999999999999999999752223443321 1111222221 1355667888888777
Q ss_pred hhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEeccCCCCCCCCcccccCCCCCch---HHHHHhcCCCCceEEeecc
Q 010542 375 LARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIPVDNLFFAGEA 451 (507)
Q Consensus 375 ~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~l~~aG~~ 451 (507)
.+..+.+.+++++.+.++++|++++|....|..+.+++|... +....+++.. ...+.+.+ .+||||||++
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~ 449 (478)
T 2ivd_A 377 RQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLG------IPQYNLGHLERVAAIDAALQR-LPGLHLIGNA 449 (478)
T ss_dssp TCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSC------CBCCBTTHHHHHHHHHHHHHT-STTEEECSTT
T ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCc------ccCCCcCHHHHHHHHHHHHhh-CCCEEEEccC
Confidence 666677889999999999999999988777887778889653 1111244321 12223333 6899999999
Q ss_pred ccCcCCchhhHHHHHHHHHHHHHHHHHH
Q 010542 452 TSMSYPGSVHGAFSTGLMAAEDCRMRVL 479 (507)
Q Consensus 452 ~~~~~~g~~egA~~SG~~aA~~i~~~l~ 479 (507)
+.. ++++||+.||.+||++|+..+.
T Consensus 450 ~~g---~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 450 YKG---VGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp TSC---CSHHHHHHHHHHHHHHHCC---
T ss_pred CCC---CCHHHHHHHHHHHHHHHHHhhc
Confidence 742 5799999999999999877653
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.2e-37 Score=317.91 Aligned_cols=410 Identities=19% Similarity=0.234 Sum_probs=277.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC--CeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
+++||+|||||++||+||++|+++| ++|+|||+++++||+++|....|+.+|.|++++.. ....+.++++++|++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~l~~~lg~~~ 80 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVA--RKHILTDLIEAIGLGE 80 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEET--TSTHHHHHHHHTTCGG
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhc--ccHHHHHHHHHcCCcc
Confidence 3589999999999999999999999 99999999999999999988899999999998874 4567899999999974
Q ss_pred eeec--CCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhc----CCCCC
Q 010542 105 YRTS--GDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREE----HDEDM 178 (507)
Q Consensus 105 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 178 (507)
.... ....+++..+.... ++.......+.. ...+. ....+.. ... + .+..... .... ..++.
T Consensus 81 ~~~~~~~~~~~~~~~g~~~~-~p~~~~~~~p~~-~~~~~--~~~~~~~--~~~----~-~~~~~~~-~~~~~~~~~~~~~ 148 (475)
T 3lov_A 81 KLVRNNTSQAFILDTGGLHP-IPKGAVMGIPTD-LDLFR--QTTLLTE--EEK----Q-EVADLLL-HPSDSLRIPEQDI 148 (475)
T ss_dssp GEEECCCCCEEEEETTEEEE-CCSSEETTEESC-HHHHT--TCSSSCH--HHH----H-HHHHHHH-SCCTTCCCCSSCC
T ss_pred eEeecCCCceEEEECCEEEE-CCCcccccCcCc-hHHHh--hccCCCh--hHH----H-HhhCccc-CCcccccCCCCCc
Confidence 3321 22222222211100 000000000000 00000 0000110 011 1 1111111 1111 34678
Q ss_pred cHHHHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCccc---------c----------------
Q 010542 179 SIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEE---------L---------------- 232 (507)
Q Consensus 179 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~---------~---------------- 232 (507)
++.++++. .++.++.+.++.++ .+.++.+++.+++....... .
T Consensus 149 s~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 217 (475)
T 3lov_A 149 PLGEYLRP-----------RLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQT 217 (475)
T ss_dssp BHHHHHHH-----------HHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC-------
T ss_pred CHHHHHHH-----------HhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhccccccccc
Confidence 88888763 35566666666665 56788888888765433110 0
Q ss_pred ------ccCCccccccchHHHHHHHhccC---CcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCccc
Q 010542 233 ------LPGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIK 303 (507)
Q Consensus 233 ------~~~~~~~~~~G~~~l~~~l~~g~---~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~ 303 (507)
..+....+.+|++.++++|.+.+ +|++|++|++|+.++++|.|++.+| ++.||+||+|+|+..+..++.
T Consensus 218 ~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~- 295 (475)
T 3lov_A 218 PQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLP- 295 (475)
T ss_dssp -------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHCT-
T ss_pred ccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHcC-
Confidence 02334578899999999998855 8999999999999999999999999 899999999999998776432
Q ss_pred ccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCCccceeecCCCCce----eeee----ccccCCCceEEEEEeccch
Q 010542 304 FEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGC----SYFL----NLHKATGHCVLVYMPAGQL 375 (507)
Q Consensus 304 ~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~----~~~~----~~~~~~~~~~l~~~~~~~~ 375 (507)
.+++ +.+..+++.+..++++.|+.+++.+....|++.+..... ..+. +...++ ..++.+++.+..
T Consensus 296 -~~~~-----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~ 368 (475)
T 3lov_A 296 -DAHL-----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPG 368 (475)
T ss_dssp -TSCC-----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTT
T ss_pred -ccCH-----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCC
Confidence 2222 677889999999999999998843333456654432211 1111 112233 566777777666
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEeccCCCCCCCCcccccCCCCC---chHHHHHhcCCCCceEEeeccc
Q 010542 376 ARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGK---SHDLYERLRIPVDNLFFAGEAT 452 (507)
Q Consensus 376 ~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~l~~aG~~~ 452 (507)
...+.+++++++++.++++|.+++|....|..+.+++|... .+.| .+|. .....+.+.++.+|||+||+++
T Consensus 369 ~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~aG~~~ 442 (475)
T 3lov_A 369 NDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDG---LPAY---TVGHADRIQRVREEVLAQYPGIYLAGLAY 442 (475)
T ss_dssp BCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEE---EECC---CTTHHHHHHHHHHHHHHHSTTEEECSTTT
T ss_pred CCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccC---CCCC---CCChHHHHHHHHHHHHhhCCCEEEEccCC
Confidence 66778899999999999999999987777888889999653 1112 3443 2234455667789999999987
Q ss_pred cCcCCchhhHHHHHHHHHHHHHHHHHH
Q 010542 453 SMSYPGSVHGAFSTGLMAAEDCRMRVL 479 (507)
Q Consensus 453 ~~~~~g~~egA~~SG~~aA~~i~~~l~ 479 (507)
.. .++++|+.||.++|++|+..+.
T Consensus 443 ~g---~g~~~a~~sG~~aA~~i~~~l~ 466 (475)
T 3lov_A 443 DG---VGLPDCVASAKTMIESIELEQS 466 (475)
T ss_dssp SC---SSHHHHHHHHHHHHHHHHHTC-
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHhh
Confidence 64 5799999999999999887653
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2e-37 Score=318.62 Aligned_cols=414 Identities=20% Similarity=0.232 Sum_probs=268.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY 105 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (507)
.+.+||+|||||++||+||++|+++|++|+|+|+++++||+++|....|+.+|.|++++.. .+..+.++++++|+...
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE--SEGDVTFLIDSLGLREK 88 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC--CSHHHHHHHHHTTCGGG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCccccc--CcHHHHHHHHHcCCccc
Confidence 4568999999999999999999999999999999999999999988899999999998863 34578999999999643
Q ss_pred eecC---CCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHH
Q 010542 106 RTSG---DNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQR 182 (507)
Q Consensus 106 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (507)
.... ...+.+.++.... ++.....+. .. ..+.. ..........+.............+.++.+
T Consensus 89 ~~~~~~~~~~~~~~~g~~~~-~p~~~~~~~---------~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 154 (504)
T 1sez_A 89 QQFPLSQNKRYIARNGTPVL-LPSNPIDLI---------KS--NFLST--GSKLQMLLEPILWKNKKLSQVSDSHESVSG 154 (504)
T ss_dssp EECCSSCCCEEEESSSSEEE-CCSSHHHHH---------HS--SSSCH--HHHHHHHTHHHHC----------CCCBHHH
T ss_pred ceeccCCCceEEEECCeEEE-CCCCHHHHh---------cc--ccCCH--HHHHHHhHhhhccCcccccccCCCCccHHH
Confidence 2111 1111111111000 000000000 00 00000 001110011111000000001134578988
Q ss_pred HHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcc------------------c------------
Q 010542 183 AISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKE------------------E------------ 231 (507)
Q Consensus 183 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~------------------~------------ 231 (507)
+++. .+++++++.++.++ .+.++.+++.+|+...... .
T Consensus 155 ~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 223 (504)
T 1sez_A 155 FFQR-----------HFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPP 223 (504)
T ss_dssp HHHH-----------HHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------
T ss_pred HHHH-----------HcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccccccccc
Confidence 8764 35566677666665 4567777777765432100 0
Q ss_pred ------cccCCccccccchHHHHHHHhcc---CCcccCceeEEEEeeCCc------EEEEEc--CC---cEEEcCEEEEe
Q 010542 232 ------LLPGGHGLMVRGYLPVINTLAKG---LDIRLGHRVTKITRHYIG------VKVTVE--GG---KTFVADAVVVA 291 (507)
Q Consensus 232 ------~~~~~~~~~~~G~~~l~~~l~~g---~~i~~~~~V~~I~~~~~~------v~v~~~--~g---~~~~ad~VI~a 291 (507)
....+..++.+|++.++++|.+. .+|++|++|++|..++++ +.|++. +| +++.||+||+|
T Consensus 224 ~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a 303 (504)
T 1sez_A 224 KTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMT 303 (504)
T ss_dssp CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEEC
T ss_pred chhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEEC
Confidence 01124567899999999999874 579999999999998877 777664 45 57899999999
Q ss_pred cCchhhccCccc-ccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCC-ccceeecCCC-------Cceee----eecc
Q 010542 292 VPLGVLKARTIK-FEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVSDTS-------YGCSY----FLNL 358 (507)
Q Consensus 292 ~p~~~~~~l~~~-~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~~-------~~~~~----~~~~ 358 (507)
+|+..+.+++.. ..+++++.. +..+++.+..++++.|+.++|++. ...+++.+.. ..... .++.
T Consensus 304 ~p~~~l~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~ 380 (504)
T 1sez_A 304 APLCDVKSMKIAKRGNPFLLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPD 380 (504)
T ss_dssp SCHHHHHTSEEESSSSBCCCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGG
T ss_pred CCHHHHHHHhhcccCCcccHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCC
Confidence 999988875421 112233322 566778888899999999998742 2234433221 11111 1122
Q ss_pred ccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEeccCCCCCCCCcccccCCCCCch--HHHH
Q 010542 359 HKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH--DLYE 436 (507)
Q Consensus 359 ~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~--~~~~ 436 (507)
..+++..++++++.+..+..+..++++++++.++++|++++|...+|..+.+.+|... +....+++.. ....
T Consensus 381 ~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~ 454 (504)
T 1sez_A 381 RAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKA------FPLYGHNYDSVLDAID 454 (504)
T ss_dssp GSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEE------EECCCTTHHHHHHHHH
T ss_pred cCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCC------CCccCcCHHHHHHHHH
Confidence 3366777888888887777788899999999999999999987667888888899542 2222233321 1123
Q ss_pred HhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHH
Q 010542 437 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 478 (507)
Q Consensus 437 ~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l 478 (507)
...++++|||+||+++++ ++++||+.||.+||++|++.+
T Consensus 455 ~~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l 493 (504)
T 1sez_A 455 KMEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYL 493 (504)
T ss_dssp HHHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999863 689999999999999998865
No 16
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=3.6e-36 Score=302.58 Aligned_cols=403 Identities=16% Similarity=0.111 Sum_probs=258.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCeeeec
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLYRTS 108 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 108 (507)
+||+|||||++||+||++|+++|++|+|||+++++||++++...+|+.+|.|++++.+......+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 58999999999999999999999999999999999999999988999999998766543345578899999998643222
Q ss_pred CCCcc-ccc-ccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHH
Q 010542 109 GDNSV-LYD-HDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISI 186 (507)
Q Consensus 109 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
..... .+. .+....+ . .... ...+......+... .. .++.............+.++.++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~-~-------~~~~-~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~s~~~~l~~ 144 (425)
T 3ka7_A 81 SEMTTVRVPLKKGNPDY-V-------KGFK-DISFNDFPSLLSYK--DR-----MKIALLIVSTRKNRPSGSSLQAWIKS 144 (425)
T ss_dssp CCCCEEEEESSTTCCSS-T-------TCEE-EEEGGGGGGGSCHH--HH-----HHHHHHHHHTTTSCCCSSBHHHHHHH
T ss_pred cCCceEEeecCCCcccc-c-------cccc-ceehhhhhhhCCHH--HH-----HHHHHHHHhhhhcCCCCCCHHHHHHH
Confidence 11111 111 0000000 0 0000 00000000011111 10 11111111221134467788888875
Q ss_pred HhccChhHHhhhhHHHHHHHHHHhhh-ccccCCcccccccccC---ccccccCCccccccchHHHHHHHhc-----cCCc
Q 010542 187 VFDRRPELRLEGLAHKVLQWYLCRME-GWFAADAETISLKSWD---KEELLPGGHGLMVRGYLPVINTLAK-----GLDI 257 (507)
Q Consensus 187 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i 257 (507)
. +.++.++.++.++. ..++.++..+++.... ......++..++.+|++.++++|.+ |++|
T Consensus 145 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i 213 (425)
T 3ka7_A 145 Q-----------VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIIDALETVISANGGKI 213 (425)
T ss_dssp H-----------CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHHHHHHHHHHTTCEE
T ss_pred h-----------cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHHHHcCCEE
Confidence 4 33445555555543 4566777777764332 1112345677899999999988865 8899
Q ss_pred ccCceeEEEEeeCCcEE-EEEcCCcEEEcCEEEEecCchhhccCcccccCCC--cHHHHHHHHHcCCcceeEEEEEccCC
Q 010542 258 RLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRL--PDWKEAAIDDLGVGIENKIIMHFDKV 334 (507)
Q Consensus 258 ~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l--~~~~~~~~~~~~~~~~~~~~l~~~~~ 334 (507)
+++++|++|..+++++. |++ +|+++.||.||+|+++..+.+++ ...+.+ ++...+.+..+++.+..++++.++++
T Consensus 214 ~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 291 (425)
T 3ka7_A 214 HTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLC-SEALSKEADAAYFKMVGTLQPSAGIKICLAADEP 291 (425)
T ss_dssp ECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHT-TTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSC
T ss_pred EECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhc-CCcccccCCHHHHHHhhCcCCCceEEEEeecCCC
Confidence 99999999999998887 666 47799999999999998876533 222333 77778888999998888899999987
Q ss_pred CCCCCccceeecCCCC--ce-----eeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcE
Q 010542 335 FWPNVEFLGVVSDTSY--GC-----SYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQ 407 (507)
Q Consensus 335 ~~~~~~~~g~~~~~~~--~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~~~ 407 (507)
.+... +.+..... .. +..+....|+|+.++.++....+ + ..+. ++++++.++++|++++|+ ..+..
T Consensus 292 ~~~~~---~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~-~~~~-~~~~~~~~~~~l~~~~p~-~~~~~ 364 (425)
T 3ka7_A 292 LVGHT---GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-E-NVKN-LESEIEMGLEDLKEIFPG-KRYEV 364 (425)
T ss_dssp SSCSS---SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-G-GGGG-HHHHHHHHHHHHHHHSTT-CCEEE
T ss_pred ccCcC---EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-c-cccc-hHHHHHHHHHHHHHhCCC-CceEE
Confidence 66432 22211111 11 11122234677777766544321 1 1112 356679999999999987 34555
Q ss_pred EEeccCCCCCCCCcccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHH
Q 010542 408 YLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 475 (507)
Q Consensus 408 ~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~ 475 (507)
..+.+|... .+.+ .++. ..++...+|++|||+|||++.+.+..+|++|+.||++||++|+
T Consensus 365 ~~v~~~~~~---~P~~---~~~~--~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 365 LLIQSYHDE---WPVN---RAAS--GTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEEEEEBTT---BCSB---SSCT--TCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EEEEEECCC---cccc---cccc--CCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 567788542 1222 2221 2234456788999999999988665699999999999999876
No 17
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=314.08 Aligned_cols=404 Identities=21% Similarity=0.229 Sum_probs=266.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCCCCCceeEeccC-CCeeeecCCceeeCCC-CCCchHHHHHhcCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDRVGGRVHTDYS-FGFPVDLGASWLHGVC-QENPLAPVISRLGLP 103 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~-~~~~~~~l~~~lg~~ 103 (507)
++||+|||||++||+||++|+++|+ +|+|||+++++||+++|... +|+.+|.|++++.... .+..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 5799999999999999999999999 99999999999999999654 5999999999875321 134578999999997
Q ss_pred e--eeecCC-----CcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 010542 104 L--YRTSGD-----NSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDE 176 (507)
Q Consensus 104 ~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (507)
. ...... ..+.+..+.... ++ .. ...+.... ..+.... +...+..... .....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~p--------~~-~~~~~~~~-~~~~~~~-------~~~~~~~~~~-~~~~~~ 142 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYVGGALHA-LP--------TG-LRGLLRPS-PPFSKPL-------FWAGLRELTK-PRGKEP 142 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEETTEEEE-CC--------CS-SCC---CC-TTSCSCS-------SHHHHTTTTS-CCCCSS
T ss_pred ceeeecCCCCchhcceEEEECCEEEE-CC--------CC-hhhccccc-chhhhHH-------HHHHHHhhhc-CCCCCC
Confidence 3 221111 111111111000 00 00 00000000 0000000 0001111100 112345
Q ss_pred CCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcccc-----------------------
Q 010542 177 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL----------------------- 232 (507)
Q Consensus 177 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~----------------------- 232 (507)
+.++.++++. .++.++.+.++.++ .+.++.++.++++........
T Consensus 143 ~~s~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~ 211 (477)
T 3nks_A 143 DETVHSFAQR-----------RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQP 211 (477)
T ss_dssp CCBHHHHHHH-----------HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CC
T ss_pred CcCHHHHHHH-----------hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCC
Confidence 6788888763 35556666666664 457777777777665421100
Q ss_pred ----------ccCCccccccchHHHHHHHhc-----cCCcccCceeEEEEeeCCc-EEEEEcCCcEEEcCEEEEecCchh
Q 010542 233 ----------LPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 233 ----------~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
...+...+.+|++.++++|.+ |++|++|++|++|..++++ +.|++. +.++.||+||+|+|+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 212 DSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASV 290 (477)
T ss_dssp CCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHH
T ss_pred chhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHH
Confidence 012346788999999998865 7899999999999998777 888764 44899999999999988
Q ss_pred hccCcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCCccceeecCCCC---c-eeeeecc-----ccCCCceEE
Q 010542 297 LKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSY---G-CSYFLNL-----HKATGHCVL 367 (507)
Q Consensus 297 ~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~---~-~~~~~~~-----~~~~~~~~l 367 (507)
+.+++ +.+++...+.+.++++.+..++.+.|+.++|+...+ |++.+... . ...|.+. ..+++..++
T Consensus 291 ~~~ll----~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 365 (477)
T 3nks_A 291 LSELL----PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGF-GHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRV 365 (477)
T ss_dssp HHHHS----CGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSS-EEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEE
T ss_pred HHHhc----cccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCc-eEEccCCCCCCceEEEEeccccCCCCCCCCceEE
Confidence 76542 334566778889999999999999999999976554 76654321 1 1222221 112367788
Q ss_pred EEEeccchhHHHh----cCCHHHHHHHHHHHHHHhCCCCCCCcEEEeccCCCCCCCCcccccCCCCCch---HHHHHhcC
Q 010542 368 VYMPAGQLARDIE----KMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRI 440 (507)
Q Consensus 368 ~~~~~~~~~~~~~----~~~~ee~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~---~~~~~~~~ 440 (507)
++++.+.+...+. .++++++++.++++|.++++...+|..+.+++|.. + +....+++.. .....+..
T Consensus 366 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~---a---~p~~~~g~~~~~~~~~~~l~~ 439 (477)
T 3nks_A 366 TVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKN---C---IPQYTLGHWQKLESARQFLTA 439 (477)
T ss_dssp EEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEE---E---EECCBTTHHHHHHHHHHHHHH
T ss_pred EEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCC---c---cCCCCCCHHHHHHHHHHHHHh
Confidence 8888877665553 46899999999999999998767788888899954 2 2222344321 12222333
Q ss_pred CCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHH
Q 010542 441 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 476 (507)
Q Consensus 441 ~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~ 476 (507)
..++|++||+++.. .++++|+.||..||++|+.
T Consensus 440 ~~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 440 HRLPLTLAGASYEG---VAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TTCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHh
Confidence 34689999999754 5799999999999999875
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2.1e-35 Score=303.37 Aligned_cols=428 Identities=15% Similarity=0.147 Sum_probs=206.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCee--
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY-- 105 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~-- 105 (507)
|++|||||||++||+||++|+++|++|+|||+++++||+++|...+|+.+|.|++++.. ...+.++++.+|....
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~---~~~~~~l~~~~g~~~~~~ 77 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITD---PSAIEELFALAGKQLKEY 77 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSC---THHHHHHHHTTTCCGGGT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecC---chhHHHHHHHhcchhhhc
Confidence 57899999999999999999999999999999999999999999999999999998853 2345677777775421
Q ss_pred ----eecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHH---HHHHHHHHHHHHHHHHHhhc-----
Q 010542 106 ----RTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELV---TKVGEAFESILKETDKVREE----- 173 (507)
Q Consensus 106 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----- 173 (507)
+........+.++. ...+..+...+...+. ....+.+.++..........
T Consensus 78 ~~~~~~~~~~~~~~~~g~------------------~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 139 (501)
T 4dgk_A 78 VELLPVTPFYRLCWESGK------------------VFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKL 139 (501)
T ss_dssp CCEEEESSSEEEEETTSC------------------EEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--
T ss_pred eeeEecCcceEEEcCCCC------------------EEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhc
Confidence 11111111111110 0000000000000000 01112234444444333211
Q ss_pred -CCCCCcHHHHHHHHhccCh--------hHHhhhhHHHHHHHHHHhhhccccCCccccccccc-CccccccCCccccccc
Q 010542 174 -HDEDMSIQRAISIVFDRRP--------ELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSW-DKEELLPGGHGLMVRG 243 (507)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~~G 243 (507)
.....+..+.+........ ......+.++.++.++.......+..+...+.... ........+.++++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG 219 (501)
T 4dgk_A 140 GTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGG 219 (501)
T ss_dssp CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTH
T ss_pred cccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCC
Confidence 1122333333321100000 00111222333333333322333333333222211 1112234456689999
Q ss_pred hHHHHHHHhc-----cCCcccCceeEEEEeeCCcEE-EEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHH
Q 010542 244 YLPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAID 317 (507)
Q Consensus 244 ~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~ 317 (507)
++.++++|++ |++|++|++|++|..++++++ |++++|+++.||.||+++++..+...++.-. +.+....+.+.
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~-~~~~~~~~~~~ 298 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQH-PAAVKQSNKLQ 298 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC------------------------
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccc-ccchhhhhhhh
Confidence 9999999865 889999999999999999987 8999999999999999998876544333222 23344445555
Q ss_pred HcCCc-ceeEEEEEccCCCCC-CCccc--e-----e---ecC----CCCceee------eeccccCCCceEEEEEeccch
Q 010542 318 DLGVG-IENKIIMHFDKVFWP-NVEFL--G-----V---VSD----TSYGCSY------FLNLHKATGHCVLVYMPAGQL 375 (507)
Q Consensus 318 ~~~~~-~~~~~~l~~~~~~~~-~~~~~--g-----~---~~~----~~~~~~~------~~~~~~~~~~~~l~~~~~~~~ 375 (507)
..++. ...++++.++.+... ..+.. + . +.. ......+ .+....|+|+..+.++.....
T Consensus 299 ~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~ 378 (501)
T 4dgk_A 299 TKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPH 378 (501)
T ss_dssp ----CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECC
T ss_pred ccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCc
Confidence 55553 344566777654321 11000 0 0 000 0001111 122234677777666543221
Q ss_pred ----hHHHhcCCHHHHHHHHHHHHHHh-CCCCCCCcEEEec----cCCCCCCC-Ccc-cccC-CCCCchHHHHH-hcCCC
Q 010542 376 ----ARDIEKMSDEAAANFAFTQLKKI-LPDASSPIQYLVS----HWGTDANS-LGS-YSYD-TVGKSHDLYER-LRIPV 442 (507)
Q Consensus 376 ----~~~~~~~~~ee~~~~~~~~L~~~-~p~~~~~~~~~~~----~w~~~~~~-~g~-~~~~-~~~~~~~~~~~-~~~~~ 442 (507)
..+|. ..++++.+++++.|++. +|++.+.+..... .|...... .|. |... ...+....+|. ..+|+
T Consensus 379 ~~~~~~~~~-~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i 457 (501)
T 4dgk_A 379 LGTANLDWT-VEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTI 457 (501)
T ss_dssp TTTSCCCHH-HHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC------------------------------CC
T ss_pred cccccccHH-HHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCC
Confidence 11122 12567888999999875 4877654433222 12221111 121 1111 11222223443 34789
Q ss_pred CceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHHHH
Q 010542 443 DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 480 (507)
Q Consensus 443 ~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l~~ 480 (507)
+|||+||+++.++ +++.||+.||+.||+.|++.|..
T Consensus 458 ~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 458 TNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp TTEEECCCH--------HHHHHHHHHHHHHHHHHHHC-
T ss_pred CCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999998775 68999999999999999998754
No 19
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=282.88 Aligned_cols=228 Identities=16% Similarity=0.176 Sum_probs=180.1
Q ss_pred cccccchHHHHHHHhc--cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHH
Q 010542 238 GLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 315 (507)
Q Consensus 238 ~~~~~G~~~l~~~l~~--g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~ 315 (507)
....+|++.++++|.+ |++|+++++|++|+.++++|+|++.+|+++.||.||+|+|++.+.+++..+.|.||+...+.
T Consensus 105 ~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~ 184 (342)
T 3qj4_A 105 FVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQ 184 (342)
T ss_dssp EECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHH
T ss_pred eecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHH
Confidence 3567899999999987 99999999999999999999999999977899999999999988876555566788888999
Q ss_pred HHHcCCcceeEEEEEccCCCCCCCccceeecCCCC-ceeeeeccccCC-----CceEEEEEeccchhHHHhcCCHHHHHH
Q 010542 316 IDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSY-GCSYFLNLHKAT-----GHCVLVYMPAGQLARDIEKMSDEAAAN 389 (507)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~ee~~~ 389 (507)
+..++|.+..++.+.|+.++|.+.++.|.+.+... ..+.+.+..+++ +..+++++..+.++..+.+++++++.+
T Consensus 185 l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 264 (342)
T 3qj4_A 185 LEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQE 264 (342)
T ss_dssp HHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHH
T ss_pred HhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHH
Confidence 99999999999999999988877777787765433 233333333332 234677888888888888999999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEeccCCCCCCCCccccc-CCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHH
Q 010542 390 FAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSY-DTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGL 468 (507)
Q Consensus 390 ~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~ 468 (507)
.++++|.+++|...+|..+.+++|...... +.. ..+++.. ....++|++|||++.. +++|+|+.||.
T Consensus 265 ~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~---~~~~~~~~~~~------~~~~~~l~laGd~~~g---~~v~~ai~sg~ 332 (342)
T 3qj4_A 265 LVFQQLENILPGLPQPIATKCQKWRHSQVT---NAAANCPGQMT------LHHKPFLACGGDGFTQ---SNFDGCITSAL 332 (342)
T ss_dssp HHHHHHHHHSCSCCCCSEEEEEEETTCSBS---SCCSSSCSCEE------EETTTEEEECSGGGSC---SSHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCceeeeccccccccc---cccCCCcceeE------ecCCccEEEEccccCC---CCccHHHHHHH
Confidence 999999999998888999999999653222 211 1122221 1356899999999865 79999999999
Q ss_pred HHHHHHHHH
Q 010542 469 MAAEDCRMR 477 (507)
Q Consensus 469 ~aA~~i~~~ 477 (507)
.||++|++.
T Consensus 333 ~aa~~i~~~ 341 (342)
T 3qj4_A 333 CVLEALKNY 341 (342)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHhh
Confidence 999998753
No 20
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=4.2e-35 Score=303.00 Aligned_cols=243 Identities=18% Similarity=0.187 Sum_probs=178.2
Q ss_pred CccccccchHHHHHHHhc----cCCcccCceeE--EEEeeCCc-------EEE-EEcCCc--EEEcCEEEEecCchhhcc
Q 010542 236 GHGLMVRGYLPVINTLAK----GLDIRLGHRVT--KITRHYIG-------VKV-TVEGGK--TFVADAVVVAVPLGVLKA 299 (507)
Q Consensus 236 ~~~~~~~G~~~l~~~l~~----g~~i~~~~~V~--~I~~~~~~-------v~v-~~~~g~--~~~ad~VI~a~p~~~~~~ 299 (507)
....+.||++.|+++|.+ |..|+++++|+ +|...+++ |+| .+.+|+ ++.||+||+|+|+..+..
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~ 417 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTP 417 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHH
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhh
Confidence 356789999999998875 46799999999 99987655 888 445676 789999999999988742
Q ss_pred ----Cccc----------------------ccCCC-c-------HHHHHHHHHcCCcceeEEEEEc-----cCCCCCCC-
Q 010542 300 ----RTIK----------------------FEPRL-P-------DWKEAAIDDLGVGIENKIIMHF-----DKVFWPNV- 339 (507)
Q Consensus 300 ----l~~~----------------------~~p~l-~-------~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~- 339 (507)
..+. +.|.| | ....+++++++|...+|+++.| +.+||++.
T Consensus 418 ~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~ 497 (721)
T 3ayj_A 418 IVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWR 497 (721)
T ss_dssp HHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEET
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccC
Confidence 1233 23436 8 8889999999999999999999 99999865
Q ss_pred c-cceeecCC-CCceeee-e-----ccccCCCceEEEEEeccchhHHH------hcCCHHHH-------HHHHHHHHH--
Q 010542 340 E-FLGVVSDT-SYGCSYF-L-----NLHKATGHCVLVYMPAGQLARDI------EKMSDEAA-------ANFAFTQLK-- 396 (507)
Q Consensus 340 ~-~~g~~~~~-~~~~~~~-~-----~~~~~~~~~~l~~~~~~~~~~~~------~~~~~ee~-------~~~~~~~L~-- 396 (507)
+ ..+....+ .....++ + +...+....+|.+|++++.+..+ ..+++++. ++.++++|+
T Consensus 498 g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~ 577 (721)
T 3ayj_A 498 GEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRY 577 (721)
T ss_dssp TEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCE
T ss_pred CCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhh
Confidence 1 22322222 2222222 2 11222223466789988888777 44444444 999999999
Q ss_pred HhCCCCC-----------C---CcEEEeccCCCCCCCCcccccCCCCCchH---HHHH-----hcCCCCceEEeeccccC
Q 010542 397 KILPDAS-----------S---PIQYLVSHWGTDANSLGSYSYDTVGKSHD---LYER-----LRIPVDNLFFAGEATSM 454 (507)
Q Consensus 397 ~~~p~~~-----------~---~~~~~~~~w~~~~~~~g~~~~~~~~~~~~---~~~~-----~~~~~~~l~~aG~~~~~ 454 (507)
++||+.. . +.++..+.|..+| +.|+|....||+... +.+. ...+.++|||||++++.
T Consensus 578 ~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~ 656 (721)
T 3ayj_A 578 VKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH 656 (721)
T ss_dssp ECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS
T ss_pred ccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc
Confidence 8998755 1 2456788999999 999999888998321 1111 23466899999999996
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHH
Q 010542 455 SYPGSVHGAFSTGLMAAEDCRMRVLE 480 (507)
Q Consensus 455 ~~~g~~egA~~SG~~aA~~i~~~l~~ 480 (507)
+.||+|||+.||++||.+|...+..
T Consensus 657 -~~GWieGAl~Sa~~Aa~~i~~~~~~ 681 (721)
T 3ayj_A 657 -LGGWLEGAFMSALNAVAGLIVRANR 681 (721)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCceehHHHHHHHHHHHHHHHHhcC
Confidence 4599999999999999999887744
No 21
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=4.8e-35 Score=301.78 Aligned_cols=402 Identities=13% Similarity=0.102 Sum_probs=252.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHh-CCCeEEEEecCCCCCceeEec-cCCCeeeecCCceeeCCCCCCchHHHHHhcCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRVGGRVHTD-YSFGFPVDLGASWLHGVCQENPLAPVISRLGLP 103 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (507)
.+.+||+|||||++||+||++|++ .|++|+|||+++++||+++|. ..+|+.+|.|+|+++. .+..+.+++++++..
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~--~~~~v~~l~~e~~~~ 85 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFS--HYKYFDDCLDEALPK 85 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCC--CBHHHHHHHHHHSCS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecC--CCHHHHHHHHHhCCc
Confidence 456899999999999999999998 599999999999999999985 5679999999999863 455788999998764
Q ss_pred e--eeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHH
Q 010542 104 L--YRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQ 181 (507)
Q Consensus 104 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (507)
. .....+...++.++... + + .+......++..... .....+.............+.++.
T Consensus 86 ~~~~~~~~~~~~i~~~g~~~---~------------~-p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~ 146 (513)
T 4gde_A 86 EDDWYTHQRISYVRCQGQWV---P------------Y-PFQNNISMLPKEEQV---KCIDGMIDAALEARVANTKPKTFD 146 (513)
T ss_dssp GGGEEEEECCEEEEETTEEE---E------------S-SGGGGGGGSCHHHHH---HHHHHHHHHHHHHHTCCSCCCSHH
T ss_pred cceeEEecCceEEEECCeEe---e------------c-chhhhhhhcchhhHH---HHHHHHHHHHHhhhcccccccCHH
Confidence 2 11111222222211100 0 0 000001112221111 112222222223334455677888
Q ss_pred HHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcccc---------------------cc-CCcc
Q 010542 182 RAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEEL---------------------LP-GGHG 238 (507)
Q Consensus 182 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~---------------------~~-~~~~ 238 (507)
+++.. .+++++.+.++.++ .+.++.++++++..+...... .. ....
T Consensus 147 ~~~~~-----------~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (513)
T 4gde_A 147 EWIVR-----------MMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRF 215 (513)
T ss_dssp HHHHH-----------HHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEE
T ss_pred HHHHH-----------hhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceee
Confidence 88763 46667777777665 567778888877665431110 00 0112
Q ss_pred ccccchHHHHHHHhc-----cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHH
Q 010542 239 LMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKE 313 (507)
Q Consensus 239 ~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~ 313 (507)
.+++|++.++++|++ |++|++|++|++|..+++++ ++.+|+++.||+||+|+|++.+.+++. ++...
T Consensus 216 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~------~~~~~ 287 (513)
T 4gde_A 216 PARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTV--TLQDGTTIGYKKLVSTMAVDFLAEAMN------DQELV 287 (513)
T ss_dssp ESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEE--EETTSCEEEEEEEEECSCHHHHHHHTT------CHHHH
T ss_pred cccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCEE--EEcCCCEEECCEEEECCCHHHHHHhcC------chhhH
Confidence 357999999999975 66899999999999887754 568999999999999999998766431 34456
Q ss_pred HHHHHcCCcceeEEEEEccCCCCC---CCccceeecCCCCc-----------------------eeeeecc----ccCCC
Q 010542 314 AAIDDLGVGIENKIIMHFDKVFWP---NVEFLGVVSDTSYG-----------------------CSYFLNL----HKATG 363 (507)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~g~~~~~~~~-----------------------~~~~~~~----~~~~~ 363 (507)
.....++|.+...+.+.++..... +..+.. +.+.... ...+.+. ..+.+
T Consensus 288 ~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y-~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~ 366 (513)
T 4gde_A 288 GLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLY-FPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAK 366 (513)
T ss_dssp HHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEE-CCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEE
T ss_pred hhhhcccCCceEEEEEEEeccccccccccceee-ccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCC
Confidence 677889998888888887643321 111110 1110000 0001110 01112
Q ss_pred ceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCCC--cEEEeccCCCCCCCCcccccCCCCC---chHHHHHh
Q 010542 364 HCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSP--IQYLVSHWGTDANSLGSYSYDTVGK---SHDLYERL 438 (507)
Q Consensus 364 ~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~--~~~~~~~w~~~~~~~g~~~~~~~~~---~~~~~~~~ 438 (507)
...+.++..+.....+..+++|++++.++++|.++.+....+ ....+.+|+ ++++.|. .++ ....++.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~---~ayP~y~---~~~~~~~~~~~~~l 440 (513)
T 4gde_A 367 EGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFD---HGYPTPT---LEREGTLTQILPKL 440 (513)
T ss_dssp CCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEE---EEEECCB---TTHHHHHHHHHHHH
T ss_pred cceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECC---CeecccC---HhHHHHHHHHHHHH
Confidence 223333333333345667899999999999999997644333 456677784 3333332 333 23344444
Q ss_pred cCCCCceEEeeccccCcCC-chhhHHHHHHHHHHHHHHH
Q 010542 439 RIPVDNLFFAGEATSMSYP-GSVHGAFSTGLMAAEDCRM 476 (507)
Q Consensus 439 ~~~~~~l~~aG~~~~~~~~-g~~egA~~SG~~aA~~i~~ 476 (507)
.. +|||++|......|. ++|++|+.+|+.||++|+.
T Consensus 441 ~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 441 QD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp HH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred hh--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 44 599999987655553 5899999999999999985
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=5.2e-34 Score=286.27 Aligned_cols=387 Identities=16% Similarity=0.120 Sum_probs=243.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCee--e
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLY--R 106 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~--~ 106 (507)
+||+|||||++||+||++|+++|++|+|||+++++||++++....|+.+|.|++++.+......+.++++++|+... .
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 58999999999999999999999999999999999999999999999999998777654455678899999998632 2
Q ss_pred ecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHH
Q 010542 107 TSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISI 186 (507)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
......+.+.+.... +. .....+...... .+..+....... .....+.++.+++..
T Consensus 81 ~~~~~~~~~~g~~~~--~~-----------------~~~~~l~~~~~~----~~~~~~~~~~~~-~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 81 SNPKGKILWEGKIFH--YR-----------------ESWKFLSVKEKA----KALKLLAEIRMN-KLPKEEIPADEWIKE 136 (421)
T ss_dssp CSSSCEEEETTEEEE--GG-----------------GGGGGCC------------CCHHHHHTT-CCCCCCSBHHHHHHH
T ss_pred CCCCeEEEECCEEEE--cC-----------------CchhhCCHhHHH----HHHHHHHHHHhc-cCCCCCCCHHHHHHH
Confidence 222222222111000 00 000001111000 011111111110 112334778887764
Q ss_pred HhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCc---cccccCCccccccchHHHHHHHhc-----cCCc
Q 010542 187 VFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVINTLAK-----GLDI 257 (507)
Q Consensus 187 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~---~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i 257 (507)
. +++++.++.++.++ ...++.++..+++..... .....++..++.+|++.++++|.+ |++|
T Consensus 137 ~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i 206 (421)
T 3nrn_A 137 K----------IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKI 206 (421)
T ss_dssp H----------TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHHHHTTTCEE
T ss_pred h----------cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHHHHHCCCEE
Confidence 3 13444555555554 345666766766543321 112245667899999999998864 8899
Q ss_pred ccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCC
Q 010542 258 RLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 337 (507)
Q Consensus 258 ~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 337 (507)
++|++|++|..+++++ | +.+|+++.||+||+|+++..+.+++ . .+.+|+...+.+.++.+.+..++++.++.+..+
T Consensus 207 ~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll-~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 282 (421)
T 3nrn_A 207 LTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLI-G-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRI 282 (421)
T ss_dssp ESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHH-C-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSS
T ss_pred EcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhc-C-cccCCHHHHHHHhCCCCCceEEEEEEEcCCccc
Confidence 9999999999988888 6 4577799999999999998876532 1 134677778888999998888899999877544
Q ss_pred CCccceeecCCCCc--e---eeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEecc
Q 010542 338 NVEFLGVVSDTSYG--C---SYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSH 412 (507)
Q Consensus 338 ~~~~~g~~~~~~~~--~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~~~~~~~~~~ 412 (507)
...+ ++.++... . ...+....|+|+.++.++.... ..+.++..+.++++|++++| ......+.+
T Consensus 283 ~~~~--~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p---~~~~~~~~~ 351 (421)
T 3nrn_A 283 GNTI--VFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP---EGEPLLAQV 351 (421)
T ss_dssp CSSE--EECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT---TCEEEEEEE
T ss_pred CCeE--EEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC---CCeEEEeee
Confidence 3222 11111101 1 1112223466777666554221 23445669999999999999 334445677
Q ss_pred CCCCCCCCcccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHH
Q 010542 413 WGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 474 (507)
Q Consensus 413 w~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i 474 (507)
|... .+.+. ..++.. .+ .++ +|||+|||++.+.+.-.||||+.||.+||+.|
T Consensus 352 ~~~~---~p~~~-~~~~~~---~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 352 YRDG---NPVNR-TRAGLH---IE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp C-----------------C---CC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred ccCC---CCccc-ccCCCC---CC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 7542 11111 011111 11 567 99999999998742225699999999999987
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=1.7e-32 Score=278.58 Aligned_cols=402 Identities=13% Similarity=0.117 Sum_probs=259.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCCCCCceeEec-cCCCeeeecCCceeeCCCCCCchHHHHHhcCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGGRVHTD-YSFGFPVDLGASWLHGVCQENPLAPVISRLGLP 103 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (507)
.+.+||+|||||++||+||++|+++| .+|+|+|+++++||++++. ...|+.+|.|++++.. ....+.++++++.-+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~l~~~~~~~ 84 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS--HYQYFDDVMDWAVQG 84 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC--SBHHHHHHHHHHCSC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc--ChHHHHHHHHHHhhh
Confidence 35689999999999999999999998 7999999999999999994 6789999999998863 445678888887532
Q ss_pred eeeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHH
Q 010542 104 LYRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRA 183 (507)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (507)
.........+.+.+.... .+ +......++..... ..+..++.. +......++.++.++
T Consensus 85 ~~~~~~~~~~~~~g~~~~----~P-------------~~~~~~~l~~~~~~---~~~~~ll~~--~~~~~~~~~~s~~e~ 142 (484)
T 4dsg_A 85 WNVLQRESWVWVRGRWVP----YP-------------FQNNIHRLPEQDRK---RCLDELVRS--HARTYTEPPNNFEES 142 (484)
T ss_dssp EEEEECCCEEEETTEEEE----SS-------------GGGCGGGSCHHHHH---HHHHHHHHH--HHCCCSSCCSSHHHH
T ss_pred hhhccCceEEEECCEEEE----eC-------------ccchhhhCCHHHHH---HHHHHHHHH--HhccCCCCCCCHHHH
Confidence 222222221222211110 00 00001112222111 111222221 112234567899998
Q ss_pred HHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCccccc---------------------cCCcccc-
Q 010542 184 ISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKEELL---------------------PGGHGLM- 240 (507)
Q Consensus 184 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~---------------------~~~~~~~- 240 (507)
+.. .++.++.+.++.++ .+.|+.+++++++.+....... .+...++
T Consensus 143 ~~~-----------~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~ 211 (484)
T 4dsg_A 143 FTR-----------QFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQ 211 (484)
T ss_dssp HHH-----------HHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEES
T ss_pred HHH-----------HhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeec
Confidence 763 36666666666665 4688888888888764321110 1111223
Q ss_pred ccchHHHHHHHhccC---CcccC--ceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHH
Q 010542 241 VRGYLPVINTLAKGL---DIRLG--HRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 315 (507)
Q Consensus 241 ~~G~~~l~~~l~~g~---~i~~~--~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~ 315 (507)
.+|++.++++|++.+ +|+++ ++|++|..++++|+ +.+|+++.||+||+|+|++.+.+++....+++|+...+.
T Consensus 212 ~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~ 289 (484)
T 4dsg_A 212 RGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAI 289 (484)
T ss_dssp SSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHH
T ss_pred CCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHH
Confidence 489999999999866 79999 56999999888654 478889999999999999988765433345578888899
Q ss_pred HHHcCCcceeEEEEEccCCCCCC-CccceeecCCCC----ceeeeecc---ccCCCceEEEEEeccchhHHHhcCCHHHH
Q 010542 316 IDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSY----GCSYFLNL---HKATGHCVLVYMPAGQLARDIEKMSDEAA 387 (507)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~~~~~~~----~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~ee~ 387 (507)
+..++|.+..++.+.|+.+...+ .+..++..++.. ....+.+. ..++++.+++..+... .....+++++
T Consensus 290 l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l 366 (484)
T 4dsg_A 290 ADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTL 366 (484)
T ss_dssp HHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSH
T ss_pred HhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHH
Confidence 99999999999999998763211 122333333211 11222222 2356666666555433 3446789999
Q ss_pred HHHHHHHHHHhCCCCC-CCc-EEEeccCCCCCCCCcccccCCCCCc---hHHHHHhcCCCCceEEeeccccCcCC-chhh
Q 010542 388 ANFAFTQLKKILPDAS-SPI-QYLVSHWGTDANSLGSYSYDTVGKS---HDLYERLRIPVDNLFFAGEATSMSYP-GSVH 461 (507)
Q Consensus 388 ~~~~~~~L~~~~p~~~-~~~-~~~~~~w~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~l~~aG~~~~~~~~-g~~e 461 (507)
++.++++|.++..-.. +++ ...+.+|.. +++.| .+++. ...++.+.+ . ||+++|.+....+. +.++
T Consensus 367 ~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~---~yP~y---~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d 438 (484)
T 4dsg_A 367 IEDCIVGCLASNLLLPEDLLVSKWHYRIEK---GYPTP---FIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQD 438 (484)
T ss_dssp HHHHHHHHHHTTSCCTTCCEEEEEEEEEEE---EEECC---BTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHH
T ss_pred HHHHHHHHHHcCCCCccceEEEEEEEEeCc---cccCC---CccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChH
Confidence 9999999999853221 232 345677732 23323 34432 233444443 3 99999997655441 3699
Q ss_pred HHHHHHHHHHHHHH
Q 010542 462 GAFSTGLMAAEDCR 475 (507)
Q Consensus 462 gA~~SG~~aA~~i~ 475 (507)
.|+.||+.||++|+
T Consensus 439 ~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 439 HSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999987
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.97 E-value=1.1e-30 Score=262.48 Aligned_cols=392 Identities=16% Similarity=0.152 Sum_probs=227.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
.+.+||+|||||++||+||++|+++| ++|+|+|+++++||+++|....|+.+|.|++++. ..+..+.++++++|++.
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~--~~~~~~~~l~~~~g~~~ 81 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGV--PSYDTIQEIMDRTGDKV 81 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBC--TTCHHHHHHHHHHCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeec--CCcHHHHHHHHHhCCcc
Confidence 35689999999999999999999999 8999999999999999998889999999999875 24567889999999875
Q ss_pred eeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHH----hh-------c
Q 010542 105 YRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKV----RE-------E 173 (507)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~ 173 (507)
........+.+.++.. .......... ......+.++....... .. .
T Consensus 82 ~~~~~~~~~~~~~g~~--------------------~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 138 (424)
T 2b9w_A 82 DGPKLRREFLHEDGEI--------------------YVPEKDPVRG---PQVMAAVQKLGQLLATKYQGYDANGHYNKVH 138 (424)
T ss_dssp CSCCCCEEEECTTSCE--------------------ECGGGCTTHH---HHHHHHHHHHHHHHHTTTTTTTSSSSSSCCC
T ss_pred ccccccceeEcCCCCE--------------------eccccCcccc---hhHHHHHHHHHHHHhhhhhhcccccchhhhh
Confidence 4322222122111100 0000000000 00111112222211110 00 0
Q ss_pred CCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhhhc-cccCCcccccccccCcc-------ccccCCccccccchH
Q 010542 174 HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEG-WFAADAETISLKSWDKE-------ELLPGGHGLMVRGYL 245 (507)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~-------~~~~~~~~~~~~G~~ 245 (507)
.....++.+++... ..+ .+.+.+..++.. .++ ++...++..+... ....++...+.+|++
T Consensus 139 ~~~~~s~~~~l~~~----------~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 206 (424)
T 2b9w_A 139 EDLMLPFDEFLALN----------GCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQ 206 (424)
T ss_dssp GGGGSBHHHHHHHT----------TCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHH
T ss_pred hhhccCHHHHHHhh----------CcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHH
Confidence 11245777776532 122 233444444432 333 3444444332110 012344567889999
Q ss_pred HHHHHHhcc--CCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcc
Q 010542 246 PVINTLAKG--LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGI 323 (507)
Q Consensus 246 ~l~~~l~~g--~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~ 323 (507)
.++++|.+. .+|++|++|++|..+++++.|++.+| ++.||+||+|+|+..+..+ .+++++ ..+.+.++.+..
T Consensus 207 ~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~~----l~~~~~-~~~~~~~~~~~~ 280 (424)
T 2b9w_A 207 AMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKFLDY----SDADDD-EREYFSKIIHQQ 280 (424)
T ss_dssp HHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHHTTS----BCCCHH-HHHHHTTCEEEE
T ss_pred HHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHHhhc----cCCCHH-HHHHHhcCCcce
Confidence 999999874 47999999999999888899998888 5999999999999876432 343433 344556666544
Q ss_pred eeEEEEEccCCCCCCCccceeecCC----CC-ceeeeeccccCCCceEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHh
Q 010542 324 ENKIIMHFDKVFWPNVEFLGVVSDT----SY-GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKI 398 (507)
Q Consensus 324 ~~~~~l~~~~~~~~~~~~~g~~~~~----~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~ 398 (507)
.. +.+.+...+ +. +.+++..+ .. ...+.....+.+...++++|..... ..+.+.+++++++.++++|.++
T Consensus 281 ~~-~~~~~~~~~-~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~~~l~~l 355 (424)
T 2b9w_A 281 YM-VDACLVKEY-PT--ISGYVPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVLDDMETF 355 (424)
T ss_dssp EE-EEEEEESSC-CS--SEEECGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHHHHHHHT
T ss_pred eE-EEEEEeccC-Cc--ccccccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHHHHHHHc
Confidence 32 222222222 11 12222211 00 0111111111222345666655432 3456778999999999999995
Q ss_pred CCCCCCCcEEEeccCCCCCCCC-cccccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHH
Q 010542 399 LPDASSPIQYLVSHWGTDANSL-GSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 475 (507)
Q Consensus 399 ~p~~~~~~~~~~~~w~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~ 475 (507)
.+.. +..+....|...+... ..+ ..|.. .+..-.++.+|+||||++++. |++|+|+.||.++|++++
T Consensus 356 ~~~~--~~~~~~~~w~~~p~~~~~~~---~~G~~--~~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 356 GHPV--EKIIEEQTWYYFPHVSSEDY---KAGWY--EKVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp TCCE--EEEEEEEEEEEEEECCHHHH---HTTHH--HHHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred CCcc--cccccccceeeeeccCHHHH---hccHH--HHHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 3321 1112233453211100 001 01111 111123556899999998764 899999999999999875
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.96 E-value=5.9e-27 Score=227.76 Aligned_cols=321 Identities=16% Similarity=0.186 Sum_probs=215.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCeeee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPLYRT 107 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 107 (507)
++||+|||||++||++|+.|+++|++|+|||+++.+||++.+....+..+|.|..++... ...+.++++++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------- 72 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTAR--DRRFATAVKQW------- 72 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCC--SHHHHHHHHHH-------
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecC--CHHHHHHHHHH-------
Confidence 579999999999999999999999999999999999999988777788888887765311 11111111110
Q ss_pred cCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHH
Q 010542 108 SGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIV 187 (507)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (507)
.....
T Consensus 73 ------------------------------------------------------------~~~~~--------------- 77 (336)
T 1yvv_A 73 ------------------------------------------------------------QAQGH--------------- 77 (336)
T ss_dssp ------------------------------------------------------------HHHTS---------------
T ss_pred ------------------------------------------------------------HhCCC---------------
Confidence 00000
Q ss_pred hccChhHHhhhhHHHHHHHHHHhhhccccCCcccccccccCccccccCCccccccchHHHHHHHhccCCcccCceeEEEE
Q 010542 188 FDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKIT 267 (507)
Q Consensus 188 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~g~~i~~~~~V~~I~ 267 (507)
...+ ...........+. .............|++.+.+++.+|++|+++++|++|+
T Consensus 78 -----------------------~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~ 132 (336)
T 1yvv_A 78 -----------------------VAEW-TPLLYNFHAGRLS-PSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVF 132 (336)
T ss_dssp -----------------------EEEE-CCCEEEESSSBCC-CCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEE
T ss_pred -----------------------eeec-cccceeccCcccc-cCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEE
Confidence 0000 0000000000000 00000111234568999999999999999999999999
Q ss_pred eeCCcEEEEEcCCcEEE-cCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCCccceeec
Q 010542 268 RHYIGVKVTVEGGKTFV-ADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVS 346 (507)
Q Consensus 268 ~~~~~v~v~~~~g~~~~-ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~ 346 (507)
.++++|.|++.+|+... +|.||+|+|+..+.+++ . . .+.....+..++|.+..++.+.|+.++|.... +...
T Consensus 133 ~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~-~---~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 205 (336)
T 1yvv_A 133 RGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLL-A---A-APKLASVVAGVKMDPTWAVALAFETPLQTPMQ--GCFV 205 (336)
T ss_dssp ECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGG-T---T-CHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC--EEEE
T ss_pred EeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhh-c---c-CHHHHHHHhhcCccceeEEEEEecCCCCCCCC--eEEe
Confidence 99999999999997664 99999999998766532 1 2 23456778889999888999999998876432 2222
Q ss_pred CCCCceeeeeccccCC--Cc-eEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhCCC-CCCCcEEEeccCCCCCCCCcc
Q 010542 347 DTSYGCSYFLNLHKAT--GH-CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD-ASSPIQYLVSHWGTDANSLGS 422 (507)
Q Consensus 347 ~~~~~~~~~~~~~~~~--~~-~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~-~~~~~~~~~~~w~~~~~~~g~ 422 (507)
......+.+.+...+. +. ..++.+..+.++..+.+++++++.+.+.+.+.++++. ...|......+|.. ..+.
T Consensus 206 ~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~---a~~~ 282 (336)
T 1yvv_A 206 QDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLY---ARPA 282 (336)
T ss_dssp CSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEE---EEES
T ss_pred CCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCc---cCCC
Confidence 2222233333332222 22 4566666677777788899999999999999999974 44567777888853 1111
Q ss_pred cccCCCCCchHHHHHhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHH
Q 010542 423 YSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 478 (507)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l 478 (507)
+. .+.. .+..+.++|++|||++.. +++++|+.||.++|+.|++.+
T Consensus 283 ~~---~~~~-----~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 283 GA---HEWG-----ALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp SC---CCCS-----CEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHT
T ss_pred CC---CCCC-----eeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 11 1111 122355899999999865 799999999999999877653
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.3e-26 Score=229.64 Aligned_cols=253 Identities=14% Similarity=0.172 Sum_probs=157.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC-CCeEEEEecCCCCCceeEeccC--CCeeee-cCCceeeCCCCCCchHHHHHhcC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRDRVGGRVHTDYS--FGFPVD-LGASWLHGVCQENPLAPVISRLG 101 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~~~GG~~~s~~~--~g~~~d-~G~~~~~~~~~~~~~~~l~~~lg 101 (507)
.+++||+|||||++||+||++|+++ |++|+|+|+++++||+++|... .|+.+| .|+++++. .+..+.++++++|
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~~g 82 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT--SNKRVWDYVRQFT 82 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE--SCHHHHHHHTTTC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC--CcHHHHHHHHHhh
Confidence 3478999999999999999999999 9999999999999999999877 688885 99998873 4567899999998
Q ss_pred CCeeeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHH
Q 010542 102 LPLYRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQ 181 (507)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (507)
+- ........++.++...+ ++..... +..++... +.+ +....++...... ....++.++.
T Consensus 83 ~~--~~~~~~~~~~~~G~~~~-~p~~~~~------~~~l~~~~---~~~-------~~~~~~l~~~~~~-~~~~~~~s~~ 142 (399)
T 1v0j_A 83 DF--TDYRHRVFAMHNGQAYQ-FPMGLGL------VSQFFGKY---FTP-------EQARQLIAEQAAE-IDTADAQNLE 142 (399)
T ss_dssp CB--CCCCCCEEEEETTEEEE-ESSSHHH------HHHHHTSC---CCH-------HHHHHHHHHHGGG-SCTTC----C
T ss_pred hh--hccccceEEEECCEEEe-CCCCHHH------HHHHhccc---CCH-------HHHHHHHHHHhhc-cCCCCcccHH
Confidence 72 11111111111111000 0000000 00000000 000 0111111111100 0123456777
Q ss_pred HHHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCc---ccc-----ccCCc-cccccchHHHHHHH
Q 010542 182 RAISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK---EEL-----LPGGH-GLMVRGYLPVINTL 251 (507)
Q Consensus 182 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~---~~~-----~~~~~-~~~~~G~~~l~~~l 251 (507)
+++.. .+++++.+.++.++ ...++.+++++++..... ... ..... +++++|++.++++|
T Consensus 143 e~l~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l 211 (399)
T 1v0j_A 143 EKAIS-----------LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNM 211 (399)
T ss_dssp CHHHH-----------HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHH
T ss_pred HHHHH-----------HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHH
Confidence 77652 46677777777776 467888888888766521 111 11122 37899999999999
Q ss_pred hc--cCCcccCceeEEEEeeCCcEEEEEcCCcEE-EcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEE
Q 010542 252 AK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTF-VADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKII 328 (507)
Q Consensus 252 ~~--g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~-~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 328 (507)
++ |++|++|++|++|... | + ++ .||+||+|+|+..+.++ .+..++|.+...+.
T Consensus 212 ~~~~g~~I~l~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y~s~~~~~ 267 (399)
T 1v0j_A 212 AADHRIEVRLNTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGWRTLDFEV 267 (399)
T ss_dssp TCSTTEEEECSCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCEEEEEEEE
T ss_pred HhcCCeEEEECCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCcceEEEEE
Confidence 87 5689999999998643 2 1 34 69999999999987543 23467787777777
Q ss_pred EEccCCC
Q 010542 329 MHFDKVF 335 (507)
Q Consensus 329 l~~~~~~ 335 (507)
+.++.+.
T Consensus 268 ~~~~~~~ 274 (399)
T 1v0j_A 268 EVLPIGD 274 (399)
T ss_dssp EEESSSC
T ss_pred EEEcccc
Confidence 8887653
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.93 E-value=2.6e-25 Score=217.71 Aligned_cols=251 Identities=16% Similarity=0.217 Sum_probs=164.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeee-cCCceeeCCCCCCchHHHHHhcCCCeee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVD-LGASWLHGVCQENPLAPVISRLGLPLYR 106 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d-~G~~~~~~~~~~~~~~~l~~~lg~~~~~ 106 (507)
++||+|||||++||+||++|+++|++|+|+|+++++||++++....|+.+| .|+++++. .+..+.+++++++.-. +
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~l~~~~-~ 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT--NDKYIWDYVNDLVEFN-R 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEE--SCHHHHHHHHTTSCBC-C
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecC--CCHHHHHHHHHhhhhh-h
Confidence 369999999999999999999999999999999999999999877899995 99998874 3456788888887522 1
Q ss_pred ecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHH
Q 010542 107 TSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISI 186 (507)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
........+.+.... ++.. + ..+..++... . ...+.+++...... ....++.++++++..
T Consensus 78 ~~~~~~~~~~g~~~~--~p~~---~---~~~~~l~~~~---~--------~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~ 137 (367)
T 1i8t_A 78 FTNSPLAIYKDKLFN--LPFN---M---NTFHQMWGVK---D--------PQEAQNIINAQKKK-YGDKVPENLEEQAIS 137 (367)
T ss_dssp CCCCCEEEETTEEEE--SSBS---H---HHHHHHHCCC---C--------HHHHHHHHHHHTTT-TCCCCCCSHHHHHHH
T ss_pred ccccceEEECCeEEE--cCCC---H---HHHHHHhccC---C--------HHHHHHHHHHHhhc-cCCCCCccHHHHHHH
Confidence 111111111111100 0000 0 0000000000 0 01112222222111 122457789888763
Q ss_pred HhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCc---cc-----cccCCc-cccccchHHHHHHHhccCC
Q 010542 187 VFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK---EE-----LLPGGH-GLMVRGYLPVINTLAKGLD 256 (507)
Q Consensus 187 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~---~~-----~~~~~~-~~~~~G~~~l~~~l~~g~~ 256 (507)
.+++++.+.++.++ ...++.+++++++..... .. +..+.+ +++++|++.++++|.+|++
T Consensus 138 -----------~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g~~ 206 (367)
T 1i8t_A 138 -----------LVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVD 206 (367)
T ss_dssp -----------HHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTTSE
T ss_pred -----------HHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcCCE
Confidence 37778888888886 468889998988765521 11 112223 3889999999999999999
Q ss_pred cccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCC
Q 010542 257 IRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 336 (507)
Q Consensus 257 i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 336 (507)
|++|++|++|... | .+.||+||+|+|+..+..+ .+..++|.+...+.+.++.+.+
T Consensus 207 i~l~~~V~~i~~~---v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 207 VKLGIDFLKDKDS---L--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp EECSCCGGGSHHH---H--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred EEeCCceeeechh---h--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccC
Confidence 9999999988631 2 2458999999999876432 2346778777777788887655
Q ss_pred C
Q 010542 337 P 337 (507)
Q Consensus 337 ~ 337 (507)
+
T Consensus 262 ~ 262 (367)
T 1i8t_A 262 Q 262 (367)
T ss_dssp S
T ss_pred C
Confidence 4
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.92 E-value=6.6e-25 Score=216.00 Aligned_cols=242 Identities=13% Similarity=0.225 Sum_probs=159.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccC--CCeee-ecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS--FGFPV-DLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
++||+|||||++||++|+.|+++|++|+|+|+++++||++++... .|+.+ |.|+++++. .+..+.+++++++.-
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~l~~~- 79 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT--DNETVWNYVNKHAEM- 79 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE--SCHHHHHHHHTTSCE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECC--CCHHHHHHHHHHhhh-
Confidence 479999999999999999999999999999999999999999776 68876 899999974 456789999999862
Q ss_pred eeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHH
Q 010542 105 YRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAI 184 (507)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (507)
.+........+.+.... ++..... ...++... ..+.+ +.+++..... ....++.++.+++
T Consensus 80 ~~~~~~~~~~~~g~~~~--~P~~~~~------~~~l~~~~--~~~~~--------~~~~l~~~~~--~~~~~~~sl~e~~ 139 (384)
T 2bi7_A 80 MPYVNRVKATVNGQVFS--LPINLHT------INQFFSKT--CSPDE--------ARALIAEKGD--STIADPQTFEEEA 139 (384)
T ss_dssp EECCCCEEEEETTEEEE--ESCCHHH------HHHHTTCC--CCHHH--------HHHHHHHHSC--CSCSSCCBHHHHH
T ss_pred cccccceEEEECCEEEE--CCCChhH------HHHHhccc--CCHHH--------HHHHHHHhhh--ccCCCCcCHHHHH
Confidence 22111111111111100 0000000 00000000 00111 1111111111 1124577898887
Q ss_pred HHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCc--------cccccCCc-cccccchHHHHHHHhc-
Q 010542 185 SIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDK--------EELLPGGH-GLMVRGYLPVINTLAK- 253 (507)
Q Consensus 185 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~--------~~~~~~~~-~~~~~G~~~l~~~l~~- 253 (507)
.. .+++++.+.++.++ .+.|+.+++++++..... ..++.+.+ +++++|++.++++|.+
T Consensus 140 ~~-----------~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~ 208 (384)
T 2bi7_A 140 LR-----------FIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNH 208 (384)
T ss_dssp HH-----------HHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCS
T ss_pred HH-----------hhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhc
Confidence 63 36677788887775 568888888888766420 11222333 3889999999999997
Q ss_pred -cCCcccCceeE-EEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEEc
Q 010542 254 -GLDIRLGHRVT-KITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHF 331 (507)
Q Consensus 254 -g~~i~~~~~V~-~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~ 331 (507)
|++|++|++|+ +|.. .||+||+|+|++.+.++ .+..++|.+...+.+.+
T Consensus 209 ~g~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~ 259 (384)
T 2bi7_A 209 ENIKVDLQREFIVEERT---------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTY 259 (384)
T ss_dssp TTEEEEESCCCCGGGGG---------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEE
T ss_pred CCCEEEECCeeehhhhc---------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEe
Confidence 67899999999 7753 29999999999987643 13457787777777777
Q ss_pred c
Q 010542 332 D 332 (507)
Q Consensus 332 ~ 332 (507)
|
T Consensus 260 d 260 (384)
T 2bi7_A 260 Q 260 (384)
T ss_dssp E
T ss_pred C
Confidence 6
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.90 E-value=7.8e-23 Score=199.73 Aligned_cols=252 Identities=12% Similarity=0.167 Sum_probs=166.1
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEecc-CCCeee-ecCCceeeCCCCCCchHHHHHhcCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDY-SFGFPV-DLGASWLHGVCQENPLAPVISRLGL 102 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~-~~g~~~-d~G~~~~~~~~~~~~~~~l~~~lg~ 102 (507)
....+||+|||||++||+||++|+++|++|+|+|+++++||++++.. ..|+.+ |.|+++++ .....+.+++++++.
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~--~~~~~~~~~~~~~~~ 103 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFH--TNSKDVFEYLSRFTE 103 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCE--ESCHHHHHHHHTSCC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccC--CChHHHHHHHHHhhh
Confidence 45679999999999999999999999999999999999999999876 678864 99999987 345678999999985
Q ss_pred CeeeecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHH
Q 010542 103 PLYRTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFESILKETDKVREEHDEDMSIQR 182 (507)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (507)
.. ........+.++...+ ++... ..+..++. ..+.. .....++. .......++.++++
T Consensus 104 ~~--~~~~~~~~~~~g~l~~-lP~~~------~~~~~l~~---~~~~~-------~~~~~~l~---~~~~~~~~~~s~~e 161 (397)
T 3hdq_A 104 WR--PYQHRVLASVDGQLLP-IPINL------DTVNRLYG---LNLTS-------FQVEEFFA---SVAEKVEQVRTSED 161 (397)
T ss_dssp EE--ECCCBEEEEETTEEEE-ESCCH------HHHHHHHT---CCCCH-------HHHHHHHH---HHCCCCSSCCBHHH
T ss_pred cc--cccccceEEECCEEEE-cCCCh------HHHHHhhc---cCCCH-------HHHHHHHh---hcccCCCCCcCHHH
Confidence 21 1111111111111000 00000 00000000 00000 11111111 11223456789999
Q ss_pred HHHHHhccChhHHhhhhHHHHHHHHHHhh-hccccCCcccccccccCcc---c-----cccCCc-cccccchHHHHHHHh
Q 010542 183 AISIVFDRRPELRLEGLAHKVLQWYLCRM-EGWFAADAETISLKSWDKE---E-----LLPGGH-GLMVRGYLPVINTLA 252 (507)
Q Consensus 183 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~---~-----~~~~~~-~~~~~G~~~l~~~l~ 252 (507)
++.. .++.++.+.++.++ .+.|+.+++++|+..+... . ++.+.. +++.+|+.+++++|.
T Consensus 162 ~~~~-----------~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~ 230 (397)
T 3hdq_A 162 VVVS-----------KVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNML 230 (397)
T ss_dssp HHHH-----------HHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHT
T ss_pred HHHH-----------hcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHH
Confidence 8873 47788888888886 5789999999997755411 1 112222 468999999999998
Q ss_pred c--cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEE
Q 010542 253 K--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMH 330 (507)
Q Consensus 253 ~--g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~ 330 (507)
+ |++|++|++|+++ +.++.+|+||+|+|++.+... ....++|.+...+.+.
T Consensus 231 ~~~g~~V~l~~~v~~~-------------~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~yrsl~~~~~~ 283 (397)
T 3hdq_A 231 SSPNIKVMLNTDYREI-------------ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPYRSLEFRHET 283 (397)
T ss_dssp CSTTEEEEESCCGGGT-------------TTTSCEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEE
T ss_pred hccCCEEEECCeEEec-------------cccccCCEEEEcCCHHHHHHH--------------hcCCCCCceEEEEEEE
Confidence 7 8899999999732 335679999999999876421 2446778777777788
Q ss_pred ccCCCCCC
Q 010542 331 FDKVFWPN 338 (507)
Q Consensus 331 ~~~~~~~~ 338 (507)
++...+.+
T Consensus 284 ~~~~~~~~ 291 (397)
T 3hdq_A 284 HDTEQLLP 291 (397)
T ss_dssp ESSSCSCS
T ss_pred eccccCCC
Confidence 88554443
No 30
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.87 E-value=8.7e-21 Score=191.18 Aligned_cols=244 Identities=12% Similarity=0.118 Sum_probs=135.9
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCC-ee---------------eecCCceeeCCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFG-FP---------------VDLGASWLHGVC 88 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g-~~---------------~d~G~~~~~~~~ 88 (507)
+...+||+|||||++||+||+.|+++|++|+|+|+++++||+++|...+| +. ++.|.+++....
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 34568999999999999999999999999999999999999999965544 21 344444432211
Q ss_pred -----CCCchHHHHHhcCCCee--eecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHH
Q 010542 89 -----QENPLAPVISRLGLPLY--RTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFE 161 (507)
Q Consensus 89 -----~~~~~~~l~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (507)
....+.++++++|+... .......+.+.++.... ++.... . .+.. .... .. ....+.
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~-~p~~~~--------~-~~~~--~l~~--~~--~~~~~~ 151 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYK-VPANEI--------E-AISS--PLMG--IF--EKRRMK 151 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEE-CCSSHH--------H-HHHC--TTSC--HH--HHHHHH
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEE-CCCChH--------H-HHhh--hccc--hh--hHHHHH
Confidence 34577899999998521 11111111111110000 000000 0 0000 0000 00 112234
Q ss_pred HHHHHHHHHhhc--------CCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhhhc----cccCCccccccc---c
Q 010542 162 SILKETDKVREE--------HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEG----WFAADAETISLK---S 226 (507)
Q Consensus 162 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~---~ 226 (507)
+++..+...... .....++.++++.+ ..++.+.+.+...... .+...+...++. .
T Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~----------~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~ 221 (453)
T 2bcg_G 152 KFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKF----------GLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILL 221 (453)
T ss_dssp HHHHHHHHCBTTBGGGSTTCCTTTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchhhhccccccCCHHHHHHHh----------CCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHH
Confidence 444444332211 13456777776543 2233333322111110 111112222221 0
Q ss_pred cCc--cccccCCccccccchHHHHHHHhc-----cCCcccCceeEEEEee--CCcEE-EEEcCCcEEEcCEEEEecCch
Q 010542 227 WDK--EELLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRH--YIGVK-VTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 227 ~~~--~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~--~~~v~-v~~~~g~~~~ad~VI~a~p~~ 295 (507)
+.. ..+..+.+.++.+|++.++++|.+ |++|+++++|++|..+ ++++. |++ +|+++.||+||+|+++.
T Consensus 222 ~~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 222 YCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp HHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 000 001123444889999999988864 8899999999999988 77764 555 58789999999999876
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.82 E-value=6.9e-18 Score=159.63 Aligned_cols=59 Identities=32% Similarity=0.549 Sum_probs=54.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCCceee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLH 85 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~ 85 (507)
|++||+|||||++||+||+.|+++|++|+||||++++||++.+....+..+|.|+.++.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 46899999999999999999999999999999999999999998888999999887663
No 32
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.80 E-value=8.1e-19 Score=175.61 Aligned_cols=243 Identities=13% Similarity=0.114 Sum_probs=143.0
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEecc-C--------------------CCeeeecCCce
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDY-S--------------------FGFPVDLGASW 83 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~-~--------------------~g~~~d~G~~~ 83 (507)
+.+.+||+|||||++||+||+.|+++|++|+|+|+++++||+++|.. . .++.+|.|+++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 34578999999999999999999999999999999999999999876 1 34678888887
Q ss_pred eeCCCCCCchHHHHHhcCCCee--eecCCCcccccccchhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHHHHHHH
Q 010542 84 LHGVCQENPLAPVISRLGLPLY--RTSGDNSVLYDHDLESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKVGEAFE 161 (507)
Q Consensus 84 ~~~~~~~~~~~~l~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (507)
+. ....+.++++++|+... .......+.+.++.... ++.... ..+. ..+.. .. ....+.
T Consensus 83 l~---~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~-~p~~~~---------~~~~---~~l~~-~~--~~~~~~ 143 (433)
T 1d5t_A 83 LM---ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYK-VPSTET---------EALA---SNLMG-MF--EKRRFR 143 (433)
T ss_dssp EE---TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEE-CCCSHH---------HHHH---CSSSC-HH--HHHHHH
T ss_pred ee---ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEE-CCCCHH---------HHhh---CcccC-hh--hHHHHH
Confidence 75 33467899999997521 11111111121110000 000000 0000 00000 00 112234
Q ss_pred HHHHHHHHHhhc--------CCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhhhccccCCccccccc-------c
Q 010542 162 SILKETDKVREE--------HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLK-------S 226 (507)
Q Consensus 162 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------~ 226 (507)
+++..+...... .....++.++++.+ ..++.+.+.+...+..+.+.++...+.. .
T Consensus 144 ~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~----------~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~ 213 (433)
T 1d5t_A 144 KFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKF----------DLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKL 213 (433)
T ss_dssp HHHHHHHHCCTTCGGGGTTCCTTTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHH
T ss_pred HHHHHHHhhcccCchhccccccccCCHHHHHHHc----------CCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHH
Confidence 444444332211 23466788877643 2233333322222222222222222211 0
Q ss_pred cCc--cccccCCccccccchHHHHHHHhc-----cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 227 WDK--EELLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 227 ~~~--~~~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
+.. .....+...++.+|++.++++|.+ |++|+++++|++|..+++++.+...+|+++.||+||+|+++..
T Consensus 214 ~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 214 YSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 000 001122355888999999988864 8899999999999998888774445788999999999998864
No 33
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.79 E-value=7.1e-19 Score=174.96 Aligned_cols=245 Identities=13% Similarity=0.102 Sum_probs=145.9
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccC--------------------CCeeeecCCcee
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYS--------------------FGFPVDLGASWL 84 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~--------------------~g~~~d~G~~~~ 84 (507)
+.+.+||+|||||++|+++|+.|+++|++|+|+|+++++||++.+... .++.+|++++.+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 356799999999999999999999999999999999999999988542 146889998887
Q ss_pred eCCCCCCchHHHHHhcCCCee--eecCCCcccccccc------hhhhhhhhhhHHhhhcccceeecCCCCccCHHHHHHH
Q 010542 85 HGVCQENPLAPVISRLGLPLY--RTSGDNSVLYDHDL------ESRVLKTVVVSLIQANLCYALFDMDGNQVPQELVTKV 156 (507)
Q Consensus 85 ~~~~~~~~~~~l~~~lg~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (507)
. ....+.+++.+.|+... .......+.+..+. .....+ ++.. ....+.. ..+... .
T Consensus 97 ~---~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~------VPss-~~e~~~~--~lLs~~----e 160 (475)
T 3p1w_A 97 L---VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHK------VPAT-DMEALVS--PLLSLM----E 160 (475)
T ss_dssp E---TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEE------CCCS-HHHHHTC--TTSCHH----H
T ss_pred e---cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEe------CCCC-HHHHhhc--cCCCHH----H
Confidence 5 45578999999888621 11111111111000 000000 0000 0011111 112211 1
Q ss_pred HHHHHHHHHHHHHHhh--------cCCCCCcHHHHHHHHhccChhHHhhhhHHHHHHHHHHhhhccccCCcccccccccC
Q 010542 157 GEAFESILKETDKVRE--------EHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWD 228 (507)
Q Consensus 157 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 228 (507)
+..+.+++..+..... ....+.++.++++. .++++.+.+.+..+++.....+....++....
T Consensus 161 K~~l~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~----------~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l 230 (475)
T 3p1w_A 161 KNRCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKH----------FNLCQLTIDFLGHAVALYLNDDYLKQPAYLTL 230 (475)
T ss_dssp HHHHHHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHH----------TTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHH
T ss_pred HHHHHHHHHHHHhhhhccchhhhcccccCCCHHHHHHH----------cCCCHHHHHHHHHHHHhhcCCCcccCCHHHHH
Confidence 1224445544443311 12346788887764 34555655544333322222222122222111
Q ss_pred c---cc------cccCCccccccchHHHHHHHhc-----cCCcccCceeEEEEe-eCCcE-EEEEcCCcEEEcCEEEEec
Q 010542 229 K---EE------LLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITR-HYIGV-KVTVEGGKTFVADAVVVAV 292 (507)
Q Consensus 229 ~---~~------~~~~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~-~~~~v-~v~~~~g~~~~ad~VI~a~ 292 (507)
. .+ +......++.+|++.++++|.+ |++|+++++|++|.. +++++ .|++.+|+++.||+||+|+
T Consensus 231 ~ri~~y~~Sl~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~ 310 (475)
T 3p1w_A 231 ERIKLYMQSISAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDP 310 (475)
T ss_dssp HHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECG
T ss_pred HHHHHHHHHHhhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECC
Confidence 0 00 1123456899999999998854 889999999999998 66665 4888899899999999999
Q ss_pred Cch
Q 010542 293 PLG 295 (507)
Q Consensus 293 p~~ 295 (507)
...
T Consensus 311 ~~~ 313 (475)
T 3p1w_A 311 SYV 313 (475)
T ss_dssp GGC
T ss_pred Ccc
Confidence 754
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.78 E-value=4.2e-18 Score=164.89 Aligned_cols=79 Identities=30% Similarity=0.435 Sum_probs=69.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC-CCCCceeEecc----------CCCeeeecCCceeeCCCCCCchH
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR-DRVGGRVHTDY----------SFGFPVDLGASWLHGVCQENPLA 94 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~-~~~GG~~~s~~----------~~g~~~d~G~~~~~~~~~~~~~~ 94 (507)
...+||+|||||++||+||+.|+++|++|+|||++ +++||++.+.. ..++.+|.|+++++. .+..+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~--~~~~~~ 119 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS--FHPLTL 119 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET--TCHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc--hHHHHH
Confidence 45789999999999999999999999999999999 99999999876 357899999999863 455788
Q ss_pred HHHHhcCCCeee
Q 010542 95 PVISRLGLPLYR 106 (507)
Q Consensus 95 ~l~~~lg~~~~~ 106 (507)
++++++|+....
T Consensus 120 ~~~~~lGl~~~~ 131 (376)
T 2e1m_A 120 ALIDKLGLKRRL 131 (376)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHcCCCcce
Confidence 999999998654
No 35
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.64 E-value=3.6e-16 Score=135.58 Aligned_cols=116 Identities=19% Similarity=0.196 Sum_probs=101.5
Q ss_pred CCc-eEEEEEeccchhHHHhcCCHHHHHHHHHHHHHHhC-CCCCCCc-EE--EeccCCCCCCCCcccccCCCCCchHHHH
Q 010542 362 TGH-CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKIL-PDASSPI-QY--LVSHWGTDANSLGSYSYDTVGKSHDLYE 436 (507)
Q Consensus 362 ~~~-~~l~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~-p~~~~~~-~~--~~~~w~~~~~~~g~~~~~~~~~~~~~~~ 436 (507)
++. .+|++|+.+..+..+..++++++++.++++|.++| |+. .+. .+ ..++|..++++.|+|.+..||+.....+
T Consensus 33 ~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~ 111 (181)
T 2e1m_C 33 TQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHL 111 (181)
T ss_dssp CSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHH
T ss_pred CCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHH
Confidence 444 57888888888888989999999999999999999 555 554 57 8899999999999998878888777788
Q ss_pred HhcCCCCceEEeeccccCcCCchhhHHHHHHHHHHHHHHHHHH
Q 010542 437 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 479 (507)
Q Consensus 437 ~~~~~~~~l~~aG~~~~~~~~g~~egA~~SG~~aA~~i~~~l~ 479 (507)
.+.+|.++|||||++++. +.|||+||++||.+||++|++.+.
T Consensus 112 ~l~~p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 112 DVVRPEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp HHHSCBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC
T ss_pred HHhCCCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999996 779999999999999999987653
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.51 E-value=8.3e-13 Score=129.34 Aligned_cols=41 Identities=37% Similarity=0.574 Sum_probs=37.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++||+||++|+++|++|+|+|+++.+|+.+
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~ 43 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGT 43 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCST
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcc
Confidence 46899999999999999999999999999999987777654
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.47 E-value=6.3e-13 Score=130.88 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=42.7
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
..+.+.+. .|++|+++++|++|..+++++.|++.+| ++.||+||+|++...
T Consensus 158 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 158 QGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 34444443 3999999999999999988888998888 899999999999864
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.47 E-value=5e-12 Score=133.71 Aligned_cols=52 Identities=17% Similarity=0.178 Sum_probs=44.1
Q ss_pred HHHHHHHhc-cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~~-g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
..+.+.+.+ |++|+++++|++|..++++|.|++.+|.++.||.||+|++...
T Consensus 421 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 421 RNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 444444443 8999999999999999999999998888999999999999874
No 39
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.45 E-value=3.8e-12 Score=125.82 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=36.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
++|||+|||||++||+||+.|+++|++|+|||+++.+|.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 459999999999999999999999999999999887765
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.42 E-value=7.5e-12 Score=132.54 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=42.9
Q ss_pred HHHHHHHhc-cCCcccCceeEEEEeeCCcEEEEEcCCc-EEEcCEEEEecCchh
Q 010542 245 LPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~~-g~~i~~~~~V~~I~~~~~~v~v~~~~g~-~~~ad~VI~a~p~~~ 296 (507)
..+.+.+.+ |++|+++++|++|..++++|.|++.+|. ++.||.||+|++...
T Consensus 416 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 416 HALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 344444443 8999999999999999999999998887 899999999999874
No 41
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.42 E-value=1.9e-12 Score=132.62 Aligned_cols=57 Identities=14% Similarity=0.097 Sum_probs=48.6
Q ss_pred CCccccccchHHHHHHHhc-----cCCcccCceeEEEEeeC--CcEE-EEEcCCcEEEcCEEEEe
Q 010542 235 GGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHY--IGVK-VTVEGGKTFVADAVVVA 291 (507)
Q Consensus 235 ~~~~~~~~G~~~l~~~l~~-----g~~i~~~~~V~~I~~~~--~~v~-v~~~~g~~~~ad~VI~a 291 (507)
++..++.+|++.|.++|.+ |++|+++++|++|..++ +++. |.+.+|+++.||+||++
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 4677899999999998854 88999999999999887 6665 55677999999999983
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.39 E-value=2e-11 Score=120.15 Aligned_cols=50 Identities=16% Similarity=0.032 Sum_probs=41.4
Q ss_pred HHHHHHh-ccCCcccCceeEEEEeeCCcEE-EEEcCCcEEEcCEEEEecCchh
Q 010542 246 PVINTLA-KGLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 246 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
.+.+.+. .|++|+++++|++|..+++++. |++.+| +++||.||+|++...
T Consensus 154 ~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 154 AFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 3444443 3899999999999999888887 888877 899999999998764
No 43
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.37 E-value=1.6e-11 Score=120.94 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=41.6
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
+.+.+.+. .|++++++++|++|..+++++.|++.+| ++.||.||+|++...
T Consensus 168 ~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 168 KAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 33444443 3899999999999999888888888777 899999999998754
No 44
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.36 E-value=3.1e-11 Score=119.85 Aligned_cols=49 Identities=20% Similarity=0.286 Sum_probs=42.1
Q ss_pred HHHHHhccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 247 VINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 247 l~~~l~~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
|.+.+.+ ++|+++++|++|+.+++++.|++.+|+++.+|.||.|.+...
T Consensus 133 L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 133 MLDYWGR-DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHCG-GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHhCCc-CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 3344444 789999999999999999999999999999999999998764
No 45
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.36 E-value=3e-11 Score=119.22 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=41.5
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
..+.+.+. .|++++++++|++|..+++++.|++.+| +++||.||+|++...
T Consensus 154 ~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 154 RAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 34444443 3899999999999999888888888776 899999999998754
No 46
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.35 E-value=1.1e-11 Score=127.96 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=34.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (507)
+.+||+|||||++||++|+.|+++|++|+|+|+....+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 46899999999999999999999999999999976543
No 47
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.35 E-value=1.7e-10 Score=114.04 Aligned_cols=51 Identities=29% Similarity=0.369 Sum_probs=41.8
Q ss_pred hHHHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 244 YLPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 244 ~~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.+.+.+.+. .|++|+++++|++|..+++++.|++.+| +++||.||+|++..
T Consensus 156 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 156 LAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 344555444 3899999999999999888888888776 89999999999875
No 48
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.32 E-value=7.6e-11 Score=121.49 Aligned_cols=43 Identities=30% Similarity=0.261 Sum_probs=38.3
Q ss_pred cCCcccCceeEEEEeeCCcEEEEE--cCC-cEEEcCEEEEecCchh
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTV--EGG-KTFVADAVVVAVPLGV 296 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~--~~g-~~~~ad~VI~a~p~~~ 296 (507)
|++|+++++|++|+.++++++|++ .+| ++++||.||.|.+...
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 889999999999999999888877 678 6899999999998754
No 49
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.32 E-value=1.3e-11 Score=123.89 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=44.4
Q ss_pred HHHHHHHh-ccCCcccCc---eeEEEEeeCCcEE-EEEcCCcEEEcCEEEEecCchhh
Q 010542 245 LPVINTLA-KGLDIRLGH---RVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVL 297 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~---~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~~ 297 (507)
..+.+.+. .|++|++++ +|++|..+++++. |++.+|+++.||.||+|++....
T Consensus 165 ~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 165 VAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 44444444 399999999 9999999988888 99999988999999999998653
No 50
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.31 E-value=8.1e-12 Score=123.62 Aligned_cols=43 Identities=26% Similarity=0.454 Sum_probs=37.3
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+.+.+||+|||||++||+||+.|+++|++|+|+|+++.+|+.+
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 4567899999999999999999999999999999999998765
No 51
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.30 E-value=2e-10 Score=113.58 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=36.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
+++||+|||||++||++|+.|+++|++|+|+|++..+|+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 358999999999999999999999999999999887765
No 52
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.30 E-value=9.6e-11 Score=120.56 Aligned_cols=50 Identities=26% Similarity=0.278 Sum_probs=41.1
Q ss_pred HHHHHhc-cCCcccCceeEEEEeeCC----cEEEEEcCC---cEEEcCEEEEecCchh
Q 010542 247 VINTLAK-GLDIRLGHRVTKITRHYI----GVKVTVEGG---KTFVADAVVVAVPLGV 296 (507)
Q Consensus 247 l~~~l~~-g~~i~~~~~V~~I~~~~~----~v~v~~~~g---~~~~ad~VI~a~p~~~ 296 (507)
|.+.+.+ |++|+++++|++|+.+++ ++++++.++ .+++||.||.|.+...
T Consensus 126 L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 126 LLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3344433 899999999999999988 888888776 6899999999998764
No 53
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.26 E-value=1.6e-10 Score=115.23 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=36.9
Q ss_pred cCCcccCceeEEEEeeCCcE--EEEEcCCc--EEEcCEEEEecCchh
Q 010542 254 GLDIRLGHRVTKITRHYIGV--KVTVEGGK--TFVADAVVVAVPLGV 296 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v--~v~~~~g~--~~~ad~VI~a~p~~~ 296 (507)
|++|+++++|++|..+++++ .+++.+|+ +++||.||.|++...
T Consensus 120 gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 99999999999999987765 46667887 699999999998754
No 54
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.24 E-value=2.6e-10 Score=113.24 Aligned_cols=51 Identities=20% Similarity=0.156 Sum_probs=40.9
Q ss_pred HHHHHhcc--CCcccCceeEEEEeeC-CcEEEEEcCCcEEEcCEEEEecCchhh
Q 010542 247 VINTLAKG--LDIRLGHRVTKITRHY-IGVKVTVEGGKTFVADAVVVAVPLGVL 297 (507)
Q Consensus 247 l~~~l~~g--~~i~~~~~V~~I~~~~-~~v~v~~~~g~~~~ad~VI~a~p~~~~ 297 (507)
|.+.|.+. ..|+++++|++++..+ ++++|+++||++++||.||-|-+.+..
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcc
Confidence 44555553 4799999999998765 468899999999999999999987643
No 55
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.23 E-value=8.9e-10 Score=111.92 Aligned_cols=43 Identities=37% Similarity=0.387 Sum_probs=38.6
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCc---EEEcCEEEEecCchh
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLGV 296 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~---~~~ad~VI~a~p~~~ 296 (507)
|++|+++++|++|+.++++++|++.++. ++++|.||.|.+...
T Consensus 120 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp TCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred CCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 8899999999999999999988887775 799999999998764
No 56
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.22 E-value=3e-10 Score=115.42 Aligned_cols=43 Identities=28% Similarity=0.235 Sum_probs=38.8
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCc---EEEcCEEEEecCchh
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLGV 296 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~---~~~ad~VI~a~p~~~ 296 (507)
|++|+++++|++|+.++++++|++.++. +++||.||.|.+.+.
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 8899999999999999999999888875 799999999998764
No 57
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.18 E-value=2.6e-10 Score=116.57 Aligned_cols=36 Identities=31% Similarity=0.371 Sum_probs=33.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
+++||+|||||++||++|+.|+++|++|+|+|+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~ 41 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC
Confidence 458999999999999999999999999999999764
No 58
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.18 E-value=9.8e-11 Score=120.07 Aligned_cols=56 Identities=29% Similarity=0.380 Sum_probs=46.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCeeeecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFPVDLGA 81 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~ 81 (507)
.+.+||+|||||++||++|+.|++.|++|+|+|+++.+||.+......|+..|...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s 74 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVES 74 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCc
Confidence 35689999999999999999999999999999999999997765555566555433
No 59
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.17 E-value=3.7e-10 Score=115.23 Aligned_cols=42 Identities=36% Similarity=0.476 Sum_probs=39.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||+.|+++|.+|+|+||.+.+||.+
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 356899999999999999999999999999999999999864
No 60
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.17 E-value=1.6e-10 Score=118.96 Aligned_cols=41 Identities=24% Similarity=0.391 Sum_probs=37.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
..+||+|||||++|+++|+.|+++|++|+|+|+++..||.+
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 46999999999999999999999999999999998777654
No 61
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.16 E-value=2.1e-10 Score=112.43 Aligned_cols=51 Identities=22% Similarity=0.204 Sum_probs=42.2
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
..+.+.+. .|++++++++|++|..+++++.|++.+| ++.||.||+|++...
T Consensus 153 ~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 153 KTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 44444443 3899999999999999888888988888 699999999999765
No 62
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.16 E-value=2.9e-10 Score=112.41 Aligned_cols=45 Identities=11% Similarity=0.011 Sum_probs=40.9
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhh
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVL 297 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~ 297 (507)
.|++|+++++|++|+.+++++.|++.+|+++.+|.||.|.+....
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 488999999999999999999999999989999999999987653
No 63
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.16 E-value=2.3e-10 Score=118.36 Aligned_cols=42 Identities=33% Similarity=0.525 Sum_probs=38.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||+.|+++|.+|+||||.+.+||.+
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 467899999999999999999999999999999999988754
No 64
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.16 E-value=5.2e-10 Score=112.55 Aligned_cols=37 Identities=32% Similarity=0.524 Sum_probs=34.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
+.+||+|||||++||++|+.|+++|++|+|+|++...
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3589999999999999999999999999999998754
No 65
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.16 E-value=3e-10 Score=117.66 Aligned_cols=42 Identities=36% Similarity=0.585 Sum_probs=38.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||+.|+++|.+|+||||.+.+||.+
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 457899999999999999999999999999999999998864
No 66
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.14 E-value=1.5e-10 Score=114.18 Aligned_cols=41 Identities=27% Similarity=0.503 Sum_probs=37.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++||+||+.|+++|.+|+|+|+++.+|+..
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 35899999999999999999999999999999999887654
No 67
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.13 E-value=2.4e-10 Score=117.52 Aligned_cols=50 Identities=28% Similarity=0.365 Sum_probs=42.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCe
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGF 75 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~ 75 (507)
...+||+|||||++||++|+.|++.|++|+|+|+++.+||.+.....+|.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~ 63 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGA 63 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCce
Confidence 34689999999999999999999999999999999999997644333333
No 68
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.13 E-value=6.5e-10 Score=109.91 Aligned_cols=44 Identities=14% Similarity=-0.006 Sum_probs=39.4
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchhh
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVL 297 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~~ 297 (507)
+++|+++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 140 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 46899999999999988889999999988999999999987653
No 69
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=1.8e-10 Score=115.61 Aligned_cols=42 Identities=33% Similarity=0.533 Sum_probs=38.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.+.+||+|||||++||+||+.|+++|.+|+|+|+.+.+|+.+
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~ 65 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKL 65 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCcee
Confidence 456899999999999999999999999999999999888754
No 70
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.12 E-value=2.5e-10 Score=116.87 Aligned_cols=53 Identities=28% Similarity=0.392 Sum_probs=45.0
Q ss_pred CCCeEEEECccHHHHHHHHHHH-hCCCeEEEEecCCCCCceeEeccCCCeeeec
Q 010542 27 RSPSVIVIGAGMAGVAAARALH-DASFKVVLLESRDRVGGRVHTDYSFGFPVDL 79 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~-~~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~ 79 (507)
+.+||+|||||++||+||+.|+ +.|++|+|+|+++.+||.+......|+..|.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~ 60 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDT 60 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecC
Confidence 4589999999999999999999 8899999999999999976555555655544
No 71
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.10 E-value=3.8e-10 Score=108.81 Aligned_cols=41 Identities=20% Similarity=0.378 Sum_probs=38.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 46899999999999999999999999999999999998865
No 72
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.09 E-value=1.4e-08 Score=103.44 Aligned_cols=39 Identities=28% Similarity=0.497 Sum_probs=34.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
+++||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 368999999999999999999999999999999875444
No 73
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.09 E-value=6.4e-10 Score=110.24 Aligned_cols=51 Identities=22% Similarity=0.126 Sum_probs=40.4
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCc-EEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
..+.+.+. .|++++++++|++|..++++ +.|++.+| ++.+|.||+|++...
T Consensus 178 ~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 178 WAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 34444444 38999999999999988776 45888888 899999999998754
No 74
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.07 E-value=2.4e-10 Score=117.05 Aligned_cols=51 Identities=29% Similarity=0.414 Sum_probs=42.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEeccCCCee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHTDYSFGFP 76 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~g~~ 76 (507)
.+.+||+|||||++||++|+.|++.|++|+|+|+++.+||.+.....+|..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~ 57 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCR 57 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCB
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCcee
Confidence 346899999999999999999999999999999999999976444434433
No 75
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.07 E-value=4.4e-10 Score=114.26 Aligned_cols=42 Identities=29% Similarity=0.405 Sum_probs=38.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||+.|++.|++|+|+|+.+.++++.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT 146 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc
Confidence 345899999999999999999999999999999998887765
No 76
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.06 E-value=6.5e-10 Score=108.34 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=38.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
.+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 4568999999999999999999999999999999999988653
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.05 E-value=6.7e-10 Score=107.91 Aligned_cols=41 Identities=32% Similarity=0.545 Sum_probs=38.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
++||+|||||++||++|+.|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 57999999999999999999999999999999999998653
No 78
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.04 E-value=1.4e-08 Score=105.14 Aligned_cols=41 Identities=34% Similarity=0.639 Sum_probs=37.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC------CCeEEEEecCCCCCce
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDA------SFKVVLLESRDRVGGR 66 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~------G~~V~vlE~~~~~GG~ 66 (507)
.+.+||+|||||++||+||+.|++. |++|+|+||...+|+.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 3468999999999999999999998 9999999999888764
No 79
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.03 E-value=5.4e-10 Score=107.50 Aligned_cols=41 Identities=24% Similarity=0.346 Sum_probs=38.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 35899999999999999999999999999999999999876
No 80
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.01 E-value=7.7e-10 Score=109.44 Aligned_cols=51 Identities=16% Similarity=0.267 Sum_probs=43.2
Q ss_pred HHHHHHhc--cCCcccCceeEEEEeeCCcE--EEEEcCCcEEEcCEEEEecCchh
Q 010542 246 PVINTLAK--GLDIRLGHRVTKITRHYIGV--KVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 246 ~l~~~l~~--g~~i~~~~~V~~I~~~~~~v--~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
.|.+.+.+ |++|+++++|++|+.+++++ .|++.+|+++++|.||.|.+...
T Consensus 112 ~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 112 LVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 34455554 78999999999999998888 89999998999999999998754
No 81
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.01 E-value=1.8e-09 Score=103.33 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=35.2
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
|+++++ ++|++|..+++.+.+++.+|.++.+|+||+|++..
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 788888 89999999988899999998899999999999764
No 82
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.00 E-value=3e-09 Score=106.75 Aligned_cols=42 Identities=33% Similarity=0.502 Sum_probs=38.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~~GG~~ 67 (507)
.+.+||+|||||++||+||..|++.|. +|+|||+++.+||.+
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 346899999999999999999999999 999999999999855
No 83
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.99 E-value=7.9e-10 Score=119.62 Aligned_cols=51 Identities=25% Similarity=0.176 Sum_probs=41.1
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCcE-EEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
..+.+.+. .|++|+++++|++|..+++++ .|++.+| +++||.||+|++...
T Consensus 155 ~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 155 QLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 34444443 389999999999999988876 4778777 899999999998765
No 84
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.99 E-value=1.2e-08 Score=106.98 Aligned_cols=37 Identities=22% Similarity=0.475 Sum_probs=34.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-CCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~ 63 (507)
..+||+|||||++||++|+.|++ .|++|+|+|+.+.+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 46899999999999999999999 99999999998654
No 85
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.98 E-value=1.5e-09 Score=101.96 Aligned_cols=41 Identities=32% Similarity=0.551 Sum_probs=37.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~~~GG~~ 67 (507)
.++||+|||||++||+||+.|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 457999999999999999999997 99999999999888743
No 86
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.98 E-value=7e-09 Score=105.14 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=41.8
Q ss_pred HHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 247 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
+.+.+. .|++++++++|++|+.+++++.|++.+|+++.+|.||+|++..
T Consensus 238 l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 238 LNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 334444 3899999999999999888889999999899999999999864
No 87
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.96 E-value=3.1e-09 Score=109.76 Aligned_cols=42 Identities=43% Similarity=0.624 Sum_probs=38.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||+.|++.|++|+|+|+.+.+||.+
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 346899999999999999999999999999999999998864
No 88
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.96 E-value=9.9e-10 Score=110.42 Aligned_cols=39 Identities=31% Similarity=0.384 Sum_probs=34.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~~GG 65 (507)
+++||+|||||++||++|++|+++| ++|+|+|++..+|+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 4689999999999999999999999 99999999555553
No 89
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.93 E-value=2.5e-09 Score=104.92 Aligned_cols=39 Identities=31% Similarity=0.458 Sum_probs=35.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
+.+||+|||||++||++|+.|+++|++|+|+|+++.+++
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 468999999999999999999999999999999877654
No 90
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.93 E-value=5.7e-11 Score=95.23 Aligned_cols=108 Identities=18% Similarity=0.225 Sum_probs=66.9
Q ss_pred cEEEcCEEEEecCchhhccCcccccCCCcHHHHHHHHHcCCcceeEEEEEccCCCCCCCccceeecCCCCceeeeecccc
Q 010542 281 KTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK 360 (507)
Q Consensus 281 ~~~~ad~VI~a~p~~~~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 360 (507)
++++||+||+|+|+..+. .+.|.|+||+...+++..++++...|+++.|+.+||++.+..|. +...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd------------~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK------------RELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH------------HHHH
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc------------ccCC
Confidence 378999999999999987 57889999999999999999999999999999999997644321 1111
Q ss_pred CCCceEEEEEe-ccchhHHHhcCCHHHHHHHHHHHHHHhCCCCC
Q 010542 361 ATGHCVLVYMP-AGQLARDIEKMSDEAAANFAFTQLKKILPDAS 403 (507)
Q Consensus 361 ~~~~~~l~~~~-~~~~~~~~~~~~~ee~~~~~~~~L~~~~p~~~ 403 (507)
+.+..++++|+ ++..+..|..+++ +..+.+++.|.+++|+..
T Consensus 70 ~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~ 112 (130)
T 2e1m_B 70 AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVD 112 (130)
T ss_dssp HHSTTHHHHHHHHCCCSCCCC-----------------------
T ss_pred CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCc
Confidence 12223666677 3777777777755 788899999999999765
No 91
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.91 E-value=5.5e-09 Score=103.68 Aligned_cols=38 Identities=37% Similarity=0.629 Sum_probs=34.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCe-EEEEecCCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFK-VVLLESRDRVG 64 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~-V~vlE~~~~~G 64 (507)
+.+||+|||||++||++|..|++.|++ |+|+|+.+.++
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 468999999999999999999999999 99999987654
No 92
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.91 E-value=2.4e-09 Score=103.20 Aligned_cols=43 Identities=33% Similarity=0.390 Sum_probs=36.7
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC----CCCcee
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD----RVGGRV 67 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~----~~GG~~ 67 (507)
..+++||+|||||++||+||+.|+++|++|+|+|+.+ .+||.+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~ 65 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQL 65 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccc
Confidence 3467999999999999999999999999999999944 667654
No 93
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.88 E-value=8.2e-09 Score=97.94 Aligned_cols=40 Identities=30% Similarity=0.394 Sum_probs=34.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCce
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (507)
++.|||+|||||++||+||++|+++|++|+|+|+. .+||.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~ 43 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNR 43 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCe
Confidence 46799999999999999999999999999999995 55664
No 94
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.86 E-value=8.1e-09 Score=97.84 Aligned_cols=41 Identities=24% Similarity=0.538 Sum_probs=37.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG~~ 67 (507)
..+||+|||||++||+||+.|+++ |++|+|+|+...+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 358999999999999999999997 99999999999888754
No 95
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.86 E-value=4.7e-08 Score=101.19 Aligned_cols=40 Identities=28% Similarity=0.347 Sum_probs=36.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCce
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (507)
..+||+|||||++||+||+.|+++|.+|+|+||....||.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 4689999999999999999999999999999998766553
No 96
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.85 E-value=5e-08 Score=100.82 Aligned_cols=40 Identities=30% Similarity=0.336 Sum_probs=36.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCce
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (507)
..+||+|||||++||+||+.|+++|.+|+|+||....||.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 3589999999999999999999999999999998776653
No 97
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.84 E-value=2.4e-08 Score=103.04 Aligned_cols=39 Identities=26% Similarity=0.452 Sum_probs=35.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 468999999999999999999999999999999876665
No 98
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.84 E-value=1e-08 Score=101.22 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=40.0
Q ss_pred HHHHHh-ccCCcccCceeEEEEeeC-CcEEEEE-cCCc--EEEcCEEEEecCchhh
Q 010542 247 VINTLA-KGLDIRLGHRVTKITRHY-IGVKVTV-EGGK--TFVADAVVVAVPLGVL 297 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~~~-~~v~v~~-~~g~--~~~ad~VI~a~p~~~~ 297 (507)
|.+.+. .|++|+++++|++|..++ +.+.|++ .+|+ ++++|.||.|.+....
T Consensus 109 L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 109 LMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 444443 388999999999999864 5677777 7887 6999999999987643
No 99
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.84 E-value=1.7e-08 Score=96.02 Aligned_cols=39 Identities=28% Similarity=0.437 Sum_probs=35.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~~GG~~ 67 (507)
++||+|||||++||+||+.|++.|+ +|+|+|++ .+||.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 3799999999999999999999999 99999994 677754
No 100
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.83 E-value=8.2e-09 Score=100.82 Aligned_cols=42 Identities=24% Similarity=0.116 Sum_probs=37.4
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
|++++++++|++|..+++++.|++.+| ++.||+||+|++...
T Consensus 102 gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 102 ELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred CCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 889999999999999888888988877 799999999998754
No 101
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.83 E-value=5.9e-08 Score=101.21 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=35.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCce
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (507)
..+||+|||||++||+||+.|+++|.+|+|+||....+|.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 3589999999999999999999999999999998766554
No 102
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.82 E-value=8.9e-09 Score=105.96 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=35.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
..+||+|||||++||++|..|++.|.+|+|+|+.+.++.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 458999999999999999999999999999999876643
No 103
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.80 E-value=3.9e-08 Score=98.96 Aligned_cols=42 Identities=26% Similarity=0.489 Sum_probs=38.0
Q ss_pred CCeEEEECccHHHHHHHHHHHh---CCCe---EEEEecCCCCCceeEe
Q 010542 28 SPSVIVIGAGMAGVAAARALHD---ASFK---VVLLESRDRVGGRVHT 69 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~---~G~~---V~vlE~~~~~GG~~~s 69 (507)
.+||+|||||++||+||..|++ .|++ |+|||+++.+||.+..
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 3799999999999999999999 9999 9999999999997643
No 104
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.80 E-value=1.1e-08 Score=103.70 Aligned_cols=40 Identities=33% Similarity=0.444 Sum_probs=37.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4578999999999999999999999999999999988764
No 105
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.80 E-value=1.7e-08 Score=95.10 Aligned_cols=40 Identities=35% Similarity=0.582 Sum_probs=36.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG~~ 67 (507)
.+||+|||||++||+||+.|+++ |++|+|+|+.+.+||.+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 45999999999999999999998 99999999999998754
No 106
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.80 E-value=3.2e-08 Score=101.25 Aligned_cols=39 Identities=33% Similarity=0.526 Sum_probs=34.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCce
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (507)
..+||+|||||++||+||+.|++ |.+|+|+||....||.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 46899999999999999999999 9999999998877764
No 107
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.79 E-value=2.9e-08 Score=90.02 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=32.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.+||+|||||++||++|..|++.|.+|+|+|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46899999999999999999999999999999973
No 108
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.79 E-value=3.6e-08 Score=92.96 Aligned_cols=35 Identities=34% Similarity=0.532 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
++||+|||||++||+||+.|++.|++|+|+|++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 58999999999999999999999999999999653
No 109
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.78 E-value=2.7e-09 Score=102.35 Aligned_cols=69 Identities=28% Similarity=0.411 Sum_probs=50.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHh--CCCeEEEEecCCCCCceeEeccCCCeeeecCCceeeCCCCCCchHHHHHhcCCCe
Q 010542 27 RSPSVIVIGAGMAGVAAARALHD--ASFKVVLLESRDRVGGRVHTDYSFGFPVDLGASWLHGVCQENPLAPVISRLGLPL 104 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~--~G~~V~vlE~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (507)
..+||+|||||++||+||++|++ .|++|+|||+++.+||.+.. .++.+. ...+ ...+.++++++|++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~---~~~~~~--~~~l-----~~~~~~~~~e~Gv~~ 133 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL---GGQLFS--AMVM-----RKPAHLFLQELEIPY 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC---CSTTCC--CEEE-----ETTTHHHHHHTTCCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe---CCccCC--HHHH-----HHHHHHHHHHcCCEE
Confidence 45799999999999999999975 59999999999999997642 122111 0111 234567888888874
Q ss_pred e
Q 010542 105 Y 105 (507)
Q Consensus 105 ~ 105 (507)
.
T Consensus 134 ~ 134 (326)
T 3fpz_A 134 E 134 (326)
T ss_dssp E
T ss_pred E
Confidence 3
No 110
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.77 E-value=2.9e-08 Score=95.10 Aligned_cols=40 Identities=33% Similarity=0.520 Sum_probs=36.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++||+||+.|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4689999999999999999999999999999997 788865
No 111
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.77 E-value=3.4e-08 Score=85.73 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=36.7
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.|++++++ +|++|+.+++++.+++.+| ++.+|.||+|++..
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 38899999 9999998888888998888 89999999999864
No 112
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.72 E-value=9.2e-08 Score=96.31 Aligned_cols=36 Identities=42% Similarity=0.649 Sum_probs=33.1
Q ss_pred eEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCce
Q 010542 30 SVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGR 66 (507)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~ 66 (507)
||+|||||++||+||+.|++.|.+|+|+||. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 7999999999999999999999999999998 55554
No 113
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.71 E-value=2.3e-07 Score=97.41 Aligned_cols=35 Identities=37% Similarity=0.649 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHh-----CCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHD-----ASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~-----~G~~V~vlE~~~~ 62 (507)
.+||+|||||++||++|..|++ .|++|+|+|+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5899999999999999999999 9999999999754
No 114
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.71 E-value=3.3e-08 Score=94.38 Aligned_cols=41 Identities=27% Similarity=0.493 Sum_probs=36.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
++.+||+|||||++||+||+.|++.|++|+|+|+ ..+||.+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 43 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQL 43 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceE
Confidence 3568999999999999999999999999999997 4677754
No 115
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.70 E-value=1.8e-07 Score=96.92 Aligned_cols=39 Identities=28% Similarity=0.382 Sum_probs=35.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC--CeEEEEecCCCCCce
Q 010542 28 SPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDRVGGR 66 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~~GG~ 66 (507)
.+||+|||||++||+||+.|+++| .+|+|+||....+|.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 589999999999999999999999 999999998766553
No 116
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=1.2e-07 Score=95.82 Aligned_cols=42 Identities=31% Similarity=0.524 Sum_probs=38.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 356999999999999999999999999999999998898865
No 117
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.69 E-value=3.9e-08 Score=98.73 Aligned_cols=49 Identities=18% Similarity=0.220 Sum_probs=40.4
Q ss_pred HHHHHHhc-cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 246 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 246 ~l~~~l~~-g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.+.+.+.+ |++++++++|++|+..++++.|++.+| ++.+|.||+|++..
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 34445543 889999999999998888888888777 89999999999754
No 118
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.69 E-value=5.3e-08 Score=93.71 Aligned_cols=41 Identities=34% Similarity=0.459 Sum_probs=36.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.+++||+|||||++||+||+.|++.|++|+|+|+. .+||.+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 45789999999999999999999999999999974 677743
No 119
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.69 E-value=3.3e-08 Score=94.98 Aligned_cols=40 Identities=30% Similarity=0.286 Sum_probs=34.8
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
|+++++++ |++|+.+++.+.|++ +|.++.+|.||+|++..
T Consensus 84 gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 84 GTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp TCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 77888887 999998888888887 77799999999999864
No 120
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.67 E-value=5.5e-08 Score=101.12 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=35.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (507)
.+++||+|||||++||+||+.|++. |++|+|+|+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4578999999999999999999998 89999999987654
No 121
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.66 E-value=2.2e-07 Score=92.14 Aligned_cols=48 Identities=25% Similarity=0.343 Sum_probs=40.2
Q ss_pred HHHHh-ccCCcccCceeEEEEeeCCcE-EEEEcCCcEEEcCEEEEecCch
Q 010542 248 INTLA-KGLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 248 ~~~l~-~g~~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.+.+. .|++++++++|++|..+++++ .|++.+|+++.||.||+|++..
T Consensus 201 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 201 QAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred HHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 33443 399999999999999887776 5888999999999999999864
No 122
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.66 E-value=8.5e-08 Score=97.11 Aligned_cols=41 Identities=34% Similarity=0.516 Sum_probs=38.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 46899999999999999999999999999999988999855
No 123
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.65 E-value=1.2e-07 Score=95.58 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=36.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC-----CeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS-----FKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-----~~V~vlE~~~~~GG 65 (507)
..+||+|||||++||+||..|++.| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 4579999999999999999999999 99999999998873
No 124
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.65 E-value=7.8e-08 Score=91.35 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=35.9
Q ss_pred cCCcccCceeEEEEeeC---CcEEEEEcCCcEEEcCEEEEecCch
Q 010542 254 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~---~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
|++++++++|+.|..+. +.+.|++.+|+++.||+||+|++..
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 77899999999998753 3688888888899999999999864
No 125
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.65 E-value=2.9e-08 Score=101.43 Aligned_cols=39 Identities=31% Similarity=0.409 Sum_probs=35.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC-CCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD-RVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~-~~GG 65 (507)
..+||+|||||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 46999999999999999999999999999999974 5553
No 126
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.65 E-value=9.3e-08 Score=97.66 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=36.2
Q ss_pred cCCcccCceeEEEEeeCCc--EEEEEcCCcEEEcCEEEEecCchh
Q 010542 254 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
|++++.+ +|++|..++++ +.|++.+|+++++|.||.|++...
T Consensus 187 gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 187 GVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred CCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 8899999 99999986554 568888888899999999999864
No 127
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.65 E-value=3.2e-08 Score=101.52 Aligned_cols=38 Identities=34% Similarity=0.428 Sum_probs=34.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC-CCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD-RVG 64 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~-~~G 64 (507)
..+||+|||||++|++||+.|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 46999999999999999999999999999999974 444
No 128
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.64 E-value=1.7e-08 Score=96.13 Aligned_cols=40 Identities=35% Similarity=0.506 Sum_probs=36.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
..|||+|||||++||+||.+|++.|++|+|+|+ +.+||.|
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~ 44 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQM 44 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCee
Confidence 369999999999999999999999999999998 5788865
No 129
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.61 E-value=2e-07 Score=95.97 Aligned_cols=50 Identities=24% Similarity=0.213 Sum_probs=39.3
Q ss_pred HHHHHHh-c-cCCcccCceeEEEEeeCCc--EEEEEcCCcEEEcCEEEEecCchh
Q 010542 246 PVINTLA-K-GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 246 ~l~~~l~-~-g~~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
.|.+.+. . |++++++ +|++|..++++ +.|++.+|+++.||.||.|++...
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 3444443 3 8999999 99999886554 568888898899999999998764
No 130
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.59 E-value=1.7e-07 Score=95.64 Aligned_cols=40 Identities=33% Similarity=0.503 Sum_probs=35.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||++|++.|++|+|+|+ ++||.+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~ 249 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQV 249 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGG
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcc
Confidence 3578999999999999999999999999999996 577754
No 131
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.58 E-value=1.3e-07 Score=96.98 Aligned_cols=40 Identities=35% Similarity=0.441 Sum_probs=34.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC-CCCc
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD-RVGG 65 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~-~~GG 65 (507)
...+||+|||||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 456999999999999999999999999999999974 3443
No 132
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.57 E-value=1.4e-06 Score=91.01 Aligned_cols=36 Identities=28% Similarity=0.491 Sum_probs=33.2
Q ss_pred CCCeEEEECccHHHHHHHHHHH---h-CCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALH---D-ASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~---~-~G~~V~vlE~~~~ 62 (507)
..+||+|||||++||+||+.|+ + +|.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4689999999999999999999 6 8999999999875
No 133
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.55 E-value=3.2e-08 Score=94.28 Aligned_cols=39 Identities=36% Similarity=0.450 Sum_probs=34.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
++.|||+|||||++||+||.+|++.|++|+|+|+.. .||
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg 40 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGG 40 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCC
Confidence 457999999999999999999999999999999954 444
No 134
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.49 E-value=1.2e-07 Score=92.22 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=35.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
.+++||+|||||++||++|++|+++|++|+|+|+....+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 4578999999999999999999999999999999764433
No 135
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.49 E-value=4.3e-07 Score=88.84 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=33.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
.++.+|+|||||++|++||..|.+.+.+|+|+|+++..
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 35688999999999999999997778999999998754
No 136
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.47 E-value=2.7e-07 Score=93.15 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=31.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (507)
++||+|||||++||+||+.|++. |++|+|||+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47999999999999999999998 89999999987653
No 137
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.44 E-value=1e-07 Score=96.80 Aligned_cols=42 Identities=31% Similarity=0.461 Sum_probs=37.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.+++||+|||||++||+||+.|++.|++|+|+|+++.+||.|
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~ 64 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTC 64 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 356999999999999999999999999999999999999965
No 138
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.43 E-value=6.2e-07 Score=88.77 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=32.1
Q ss_pred CCeEEEECccHHHHHHHHHHHh---CCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHD---ASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~---~G~~V~vlE~~~~ 62 (507)
++||+|||||++||+||..|++ .|++|+|+|+++.
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 3689999999999999999999 8999999999874
No 139
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.40 E-value=6.5e-07 Score=92.59 Aligned_cols=37 Identities=19% Similarity=0.384 Sum_probs=33.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (507)
++||+|||||++||+||+.|++. |++|+|+|+++.+|
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 36999999999999999999998 78999999987643
No 140
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.40 E-value=1.1e-07 Score=95.97 Aligned_cols=42 Identities=33% Similarity=0.525 Sum_probs=39.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
+.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 358999999999999999999999999999999999999763
No 141
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.40 E-value=1.6e-07 Score=89.61 Aligned_cols=42 Identities=33% Similarity=0.556 Sum_probs=37.2
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+.+.+||+|||||++||+||+.|++.|++|+|+|+ ..+||.+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 44568999999999999999999999999999999 5778865
No 142
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.36 E-value=2.5e-07 Score=94.48 Aligned_cols=43 Identities=30% Similarity=0.483 Sum_probs=37.9
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC--------CCCcee
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD--------RVGGRV 67 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~--------~~GG~~ 67 (507)
+...+||+|||||++||+||..|++.|++|+|+|+.+ .+||.|
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 79 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTC 79 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCccccc
Confidence 4457899999999999999999999999999999964 677754
No 143
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.36 E-value=3e-07 Score=91.90 Aligned_cols=42 Identities=43% Similarity=0.590 Sum_probs=39.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||+.|++.|++|+|||+++++||.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 457899999999999999999999999999999999999975
No 144
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.36 E-value=2.1e-07 Score=93.74 Aligned_cols=40 Identities=33% Similarity=0.418 Sum_probs=37.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.++||+|||||++||+||+.|++.|++|+|+|+ +.+||.|
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTC 43 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcc
Confidence 368999999999999999999999999999999 7899965
No 145
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.36 E-value=2.8e-07 Score=94.22 Aligned_cols=44 Identities=23% Similarity=0.345 Sum_probs=40.4
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
...++||+|||||++|++||++|++.|++|+|+|+++.+||.+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 56679999999999999999999999999999999988998753
No 146
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.33 E-value=4.1e-07 Score=96.20 Aligned_cols=45 Identities=42% Similarity=0.665 Sum_probs=41.2
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEe
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHT 69 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s 69 (507)
....+||+|||||++||+||+.|+++|++|+|+|+++.+||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 356789999999999999999999999999999999999998653
No 147
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.32 E-value=2.9e-07 Score=92.81 Aligned_cols=41 Identities=29% Similarity=0.439 Sum_probs=38.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
++||+|||||++|++||.+|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999989999753
No 148
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.32 E-value=2.4e-07 Score=89.74 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=33.3
Q ss_pred CeEEEECccHHHHHHHHHHHhCC------CeEEEEecCCCCCc
Q 010542 29 PSVIVIGAGMAGVAAARALHDAS------FKVVLLESRDRVGG 65 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G------~~V~vlE~~~~~GG 65 (507)
+||+|||||++||++|++|+++| ++|+|+|+....+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 59999999999999999999998 89999999765444
No 149
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.31 E-value=2.6e-07 Score=87.76 Aligned_cols=41 Identities=29% Similarity=0.446 Sum_probs=37.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEE-EecCCCCCceeE
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVL-LESRDRVGGRVH 68 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~v-lE~~~~~GG~~~ 68 (507)
.++||+|||||++||+||+.|++.|++|+| +|+ +.+||.+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 468999999999999999999999999999 999 78898753
No 150
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.30 E-value=3.8e-07 Score=92.19 Aligned_cols=41 Identities=34% Similarity=0.423 Sum_probs=36.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++||+||++|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999988665543
No 151
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.30 E-value=4.1e-07 Score=90.58 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=31.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.+++||+|||||++||++|+.|+++|++|+|+|+..
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 356899999999999999999999999999999975
No 152
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.28 E-value=3.7e-07 Score=90.20 Aligned_cols=39 Identities=28% Similarity=0.353 Sum_probs=34.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG 65 (507)
..+||+|||||++||++|+.|+++ |++|+|+|+....+|
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc
Confidence 358999999999999999999999 999999999765544
No 153
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.27 E-value=1.3e-06 Score=88.63 Aligned_cols=41 Identities=27% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCc
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGG 65 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG 65 (507)
..+.+||+|||||++||++|..|.+.|...+++|+.+..|+
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 45678999999999999999999987776666666655554
No 154
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.27 E-value=6e-07 Score=90.46 Aligned_cols=41 Identities=34% Similarity=0.450 Sum_probs=37.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
..++||+|||||++|++||++|++.|++|+|+|++ .+||.+
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~ 42 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTC 42 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccc
Confidence 35689999999999999999999999999999997 788865
No 155
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.26 E-value=3.6e-07 Score=92.46 Aligned_cols=41 Identities=32% Similarity=0.549 Sum_probs=37.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
..++||+|||||++||+||+.|++.|++|+|+|++ .+||.|
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTC 58 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcc
Confidence 35699999999999999999999999999999975 788875
No 156
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.25 E-value=4.2e-07 Score=91.82 Aligned_cols=41 Identities=34% Similarity=0.516 Sum_probs=38.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 46899999999999999999999999999999998999975
No 157
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.25 E-value=5.6e-07 Score=90.51 Aligned_cols=50 Identities=20% Similarity=0.311 Sum_probs=41.3
Q ss_pred HHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCc-EEEcCEEEEecCch
Q 010542 246 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLG 295 (507)
Q Consensus 246 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~-~~~ad~VI~a~p~~ 295 (507)
.+.+.+. .|++++++++|++|+.+++++.|++.+|+ ++.+|.||+|++..
T Consensus 212 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 212 TLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 3444454 48999999999999987777888889998 89999999999754
No 158
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.23 E-value=3.5e-07 Score=92.56 Aligned_cols=41 Identities=34% Similarity=0.582 Sum_probs=38.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 45899999999999999999999999999999999999865
No 159
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.23 E-value=5.9e-07 Score=90.22 Aligned_cols=41 Identities=32% Similarity=0.429 Sum_probs=38.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 37999999999999999999999999999999989999753
No 160
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.22 E-value=5.2e-07 Score=90.40 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=37.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
+++||+|||||++|++||++|++.|++|+|+|++ .+||.|
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTC 42 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcc
Confidence 4689999999999999999999999999999997 789875
No 161
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.22 E-value=6.2e-07 Score=90.90 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=37.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEec--------CCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLES--------RDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~--------~~~~GG~~ 67 (507)
..++||+|||||++||+||..|++.|++|+|+|+ ...+||-|
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCee
Confidence 4579999999999999999999999999999998 56788855
No 162
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.21 E-value=1e-06 Score=93.50 Aligned_cols=44 Identities=32% Similarity=0.671 Sum_probs=40.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeEe
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVHT 69 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~s 69 (507)
...+||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 45789999999999999999999999999999999999997643
No 163
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.21 E-value=1.1e-06 Score=86.16 Aligned_cols=35 Identities=34% Similarity=0.536 Sum_probs=33.0
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRV 63 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~ 63 (507)
+||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 5899999999999999999999 9999999998766
No 164
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=7.3e-07 Score=90.08 Aligned_cols=41 Identities=34% Similarity=0.542 Sum_probs=37.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
+++||+|||||++|++||+.|++.|++|+|+|++ .+||.|.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 4689999999999999999999999999999996 7888763
No 165
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.18 E-value=8.2e-07 Score=89.95 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=39.8
Q ss_pred HHHHHh-ccCCcccCceeEEEEeeCC-cEEEEEcCCcEEEcCEEEEecCch
Q 010542 247 VINTLA-KGLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
+.+.|. +|++++++++|++|..+++ .+.|++.+|+++.+|.||+|++..
T Consensus 237 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 237 LTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 444444 4899999999999998764 477888899889999999999754
No 166
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.17 E-value=6.7e-07 Score=90.90 Aligned_cols=50 Identities=22% Similarity=0.325 Sum_probs=41.4
Q ss_pred HHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 246 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 246 ~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.+.+.+. .|++++++++|++|..+++++.+++.+|+++.+|.||+|++..
T Consensus 228 ~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 228 VLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 3444444 3999999999999998877788888888899999999999754
No 167
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.16 E-value=6.7e-07 Score=90.66 Aligned_cols=50 Identities=28% Similarity=0.348 Sum_probs=40.2
Q ss_pred HHHHHHh-ccCCcccCceeEEEEeeCC-cEEEEEcCCcEEEcCEEEEecCch
Q 010542 246 PVINTLA-KGLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 246 ~l~~~l~-~g~~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.+.+.|. +|++++++++|++|..+++ .+.|++.+|+++.+|.||+|++..
T Consensus 240 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 240 EVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 3444454 4999999999999998764 477888899899999999999753
No 168
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.16 E-value=1e-06 Score=89.28 Aligned_cols=39 Identities=38% Similarity=0.517 Sum_probs=36.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
.+||+|||||++||+||..|++.|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 489999999999999999999999999999996 588865
No 169
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=8.1e-07 Score=89.23 Aligned_cols=41 Identities=27% Similarity=0.445 Sum_probs=38.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.|.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 468999999999999999999999999999999 78999764
No 170
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.14 E-value=1.6e-06 Score=90.14 Aligned_cols=41 Identities=27% Similarity=0.431 Sum_probs=37.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
..+||+|||||++||+||+.|++.|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999988844
No 171
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=1.2e-06 Score=88.98 Aligned_cols=39 Identities=44% Similarity=0.624 Sum_probs=36.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
++||+|||||.+|++||..|++.|++|+|+|++ .+||.|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccc
Confidence 589999999999999999999999999999997 588865
No 172
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=1.1e-06 Score=88.25 Aligned_cols=39 Identities=31% Similarity=0.459 Sum_probs=36.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 589999999999999999999999999999997 888865
No 173
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.13 E-value=2e-05 Score=77.09 Aligned_cols=43 Identities=26% Similarity=0.398 Sum_probs=38.8
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|..+++++.|++.+|+++.+|.||+|++..
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCC
Confidence 4889999999999998888888888899899999999999864
No 174
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.12 E-value=1.5e-06 Score=87.96 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=31.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEec
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (507)
...+||+|||||++||+||++|++.|++|+|+|+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 3579999999999999999999999999999995
No 175
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.12 E-value=1e-06 Score=88.64 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=36.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 479999999999999999999999999999997 788865
No 176
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.09 E-value=2.7e-06 Score=87.28 Aligned_cols=44 Identities=18% Similarity=0.297 Sum_probs=36.4
Q ss_pred ccCCcccCceeEEEEeeCCc--EEEEEcCCcEEEcCEEEEecCchhh
Q 010542 253 KGLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGVL 297 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~~ 297 (507)
.|++++.+ +|++|..++++ +.|++.+|+++.||.||.|++....
T Consensus 178 ~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred CCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 38899999 89999886554 4688888888999999999987653
No 177
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.09 E-value=2.5e-06 Score=81.32 Aligned_cols=40 Identities=35% Similarity=0.373 Sum_probs=35.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
++||+|||||++|+.||+.|++.|++|+|+|++...+.-.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 4799999999999999999999999999999987655443
No 178
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.06 E-value=2.4e-05 Score=78.36 Aligned_cols=44 Identities=43% Similarity=0.603 Sum_probs=38.8
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
.|++++++++|++|+.+++++.+++.+|+++.+|.||+|++...
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCc
Confidence 38999999999999988888888888888999999999998643
No 179
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.06 E-value=3.6e-06 Score=88.71 Aligned_cols=42 Identities=29% Similarity=0.515 Sum_probs=39.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
...+||+|||||++||+||..|++.|++|+|+|+++.+||.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCee
Confidence 457899999999999999999999999999999999999975
No 180
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.02 E-value=2.7e-06 Score=85.56 Aligned_cols=39 Identities=36% Similarity=0.519 Sum_probs=36.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCcee
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRV 67 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 67 (507)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 5899999999999999999999999999999977 88865
No 181
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.01 E-value=2.3e-06 Score=87.41 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=44.4
Q ss_pred cccccccccchhhhcccCCCCCCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 010542 4 ASRSNRQLRRALCYSNNAGKGQARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (507)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (507)
|.||+...-....++..........+|+||||||.+|+++|.+|++ |.+|+|||+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 2 ATTSDHDFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp CCCCCCCCGGGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred cccccCCcccCccccCcccccccCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 3455555555554444333323467999999999999999999999 99999999976543
No 182
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.99 E-value=4.9e-06 Score=85.05 Aligned_cols=49 Identities=10% Similarity=0.091 Sum_probs=37.9
Q ss_pred HHHHHh--ccCCcccCceeEEEEeeCCc--EEEEEcCCcEEEcCEEEEecCchh
Q 010542 247 VINTLA--KGLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 247 l~~~l~--~g~~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
|.+.+. .|++++.+ +|++|..++++ +.|++.+|.+++||.||.|++...
T Consensus 181 L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 181 LTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 334444 38899999 59999887554 357777877899999999998864
No 183
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.97 E-value=3.3e-06 Score=84.42 Aligned_cols=42 Identities=29% Similarity=0.326 Sum_probs=38.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-C------CCeEEEEecCCCCCceeE
Q 010542 27 RSPSVIVIGAGMAGVAAARALHD-A------SFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~-~------G~~V~vlE~~~~~GG~~~ 68 (507)
+.+||+|||||++||+||..|++ . |++|+|||+.+.+||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 35799999999999999999999 7 999999999989998763
No 184
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.97 E-value=4.2e-06 Score=83.30 Aligned_cols=39 Identities=33% Similarity=0.598 Sum_probs=35.6
Q ss_pred CCeEEEECccHHHHHHHHHHHh--CCCeEEEEecCCCCCce
Q 010542 28 SPSVIVIGAGMAGVAAARALHD--ASFKVVLLESRDRVGGR 66 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~--~G~~V~vlE~~~~~GG~ 66 (507)
++||+|||||++||+||++|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 4799999999999999999999 78999999999877653
No 185
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.97 E-value=3.5e-06 Score=87.80 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=34.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC------CCeEEEEecCCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA------SFKVVLLESRDRVG 64 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~------G~~V~vlE~~~~~G 64 (507)
..+||+|||||++||+||+.|+++ |.+|+|+||....+
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 368999999999999999999997 99999999976544
No 186
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.97 E-value=4.3e-06 Score=92.07 Aligned_cols=41 Identities=27% Similarity=0.516 Sum_probs=38.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCCCCCcee
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDRVGGRV 67 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~~GG~~ 67 (507)
..+||+|||||++||+||++|++.|+ +|+|||+.+.+||.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999975
No 187
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=5.5e-06 Score=82.94 Aligned_cols=39 Identities=28% Similarity=0.495 Sum_probs=34.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCCce
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGGR 66 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG~ 66 (507)
++||+|||||++||+||+.|++. |++|+|+|+++.+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC
Confidence 58999999999999999999997 7899999999887653
No 188
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.93 E-value=6e-05 Score=75.66 Aligned_cols=43 Identities=28% Similarity=0.442 Sum_probs=36.9
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEc-C--Cc--EEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVE-G--GK--TFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~-~--g~--~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|+.+++++.+++. + |+ ++.+|.||+|++..
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 48999999999999988877777776 6 76 89999999999754
No 189
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.93 E-value=7e-05 Score=74.84 Aligned_cols=43 Identities=14% Similarity=0.281 Sum_probs=37.2
Q ss_pred ccCCcccCceeEEEEeeCCc-EEEEEcCCcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|+.++++ +.|++.+|+++.+|.||+|++..
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 38999999999999987654 77888899899999999999754
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.93 E-value=5.6e-05 Score=74.54 Aligned_cols=44 Identities=25% Similarity=0.377 Sum_probs=38.1
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
+|+++++++.|++|..+++...|++.+|+++.+|.||+|++...
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 48999999999999987655578889999999999999998653
No 191
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.92 E-value=5.3e-06 Score=90.73 Aligned_cols=41 Identities=41% Similarity=0.674 Sum_probs=39.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
.+||+|||||++||+||..|++.|++|+|+|+++++||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999886
No 192
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.92 E-value=7.9e-05 Score=74.72 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 468999999999999999999999999999987643
No 193
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.92 E-value=3.3e-06 Score=85.49 Aligned_cols=40 Identities=38% Similarity=0.606 Sum_probs=37.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCceeE
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVGGRVH 68 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 68 (507)
.+||+|||||++||+||++|++. ++|+|||+++++||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 46899999999999999999999 99999999999999764
No 194
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.88 E-value=8e-06 Score=81.74 Aligned_cols=42 Identities=29% Similarity=0.363 Sum_probs=38.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC--CeEEEEecCCCCCceeE
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDRVGGRVH 68 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~~GG~~~ 68 (507)
..+||+|||||++|++||..|++.| ++|+|||+.+.+||..+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4589999999999999999999998 99999999999998763
No 195
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.88 E-value=6.5e-06 Score=83.77 Aligned_cols=48 Identities=19% Similarity=0.151 Sum_probs=41.3
Q ss_pred HHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCc
Q 010542 247 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 294 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 294 (507)
+.+.|. +|+++++++.|+++...++++.|++.++.++.+|.|++|++-
T Consensus 269 l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 269 VKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 334444 399999999999999999999999999989999999999973
No 196
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.88 E-value=1e-05 Score=79.81 Aligned_cols=49 Identities=29% Similarity=0.358 Sum_probs=40.5
Q ss_pred HHHHHh-ccCCcccCceeEEEEeeCCcEE-EEEcCCcEEEcCEEEEecCch
Q 010542 247 VINTLA-KGLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 295 (507)
+.+.+. .|++++++++|++|..+++++. |++.+|+++.+|.||+|++..
T Consensus 190 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 190 FHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 334443 3999999999999998877764 888999999999999999864
No 197
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.87 E-value=8.7e-06 Score=84.64 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=32.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEec
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (507)
...+||+|||||.+||+||.+|++.|++|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 4579999999999999999999999999999997
No 198
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.87 E-value=9.9e-05 Score=72.64 Aligned_cols=36 Identities=33% Similarity=0.490 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 578999999999999999999999999999997654
No 199
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.86 E-value=1.2e-05 Score=79.35 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=34.7
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|+.|+.++. .|++.+|+++.+|++|+|++..
T Consensus 70 ~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 70 ARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 3889999999999987665 5666788899999999999854
No 200
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.85 E-value=1e-05 Score=81.64 Aligned_cols=38 Identities=29% Similarity=0.337 Sum_probs=34.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCCc
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGG 65 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG 65 (507)
++||+|||||++|++||..|++. |.+|+|+|+++..|+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 75 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY 75 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC
Confidence 57999999999999999999996 899999999887653
No 201
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.84 E-value=1.5e-05 Score=79.14 Aligned_cols=49 Identities=29% Similarity=0.326 Sum_probs=39.4
Q ss_pred HHHHHh-ccCCcccCceeEEEEe--eCCcE-EEEEcCCcEEEcCEEEEecCch
Q 010542 247 VINTLA-KGLDIRLGHRVTKITR--HYIGV-KVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~--~~~~v-~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
+.+.+. .|++++++++|++|.. +++++ .|++.+|+++.+|.||+|++..
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 334444 3999999999999987 55666 5888899899999999999864
No 202
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.83 E-value=0.00013 Score=72.36 Aligned_cols=37 Identities=32% Similarity=0.542 Sum_probs=33.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 184 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 3578999999999999999999999999999996653
No 203
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=0.00011 Score=73.60 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=33.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 478999999999999999999999999999997654
No 204
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.81 E-value=1.4e-05 Score=80.11 Aligned_cols=37 Identities=27% Similarity=0.277 Sum_probs=33.9
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCCc
Q 010542 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVGG 65 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~GG 65 (507)
+||+|||||++|++||..|++. |.+|+|+|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5899999999999999999998 999999999887653
No 205
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.79 E-value=0.0001 Score=73.53 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=33.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|+|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 4589999999999999999999999999999997653
No 206
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.79 E-value=2e-05 Score=80.82 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=33.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~~ 62 (507)
.+.+|+||||||.||+++|.+|++.| .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 69999999765
No 207
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.79 E-value=1.6e-05 Score=79.59 Aligned_cols=36 Identities=25% Similarity=0.354 Sum_probs=33.6
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRDRVG 64 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~~~G 64 (507)
+||+|||||++|++||..|++. |++|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999997 89999999988776
No 208
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.78 E-value=1.2e-05 Score=82.18 Aligned_cols=37 Identities=27% Similarity=0.524 Sum_probs=31.6
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHh-CCCeEEEEecCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRD 61 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~ 61 (507)
..+.||+||||||.+|+..|.+|++ .|++|+|||+..
T Consensus 14 ~~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 14 HAPNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 3458999999999999999999998 578999999954
No 209
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.78 E-value=1.4e-05 Score=79.56 Aligned_cols=37 Identities=30% Similarity=0.579 Sum_probs=33.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHh---CCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHD---ASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~---~G~~V~vlE~~~~~ 63 (507)
.++||+|||||++||+||+.|++ .|++|+|+|+++..
T Consensus 3 ~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 3 GSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp TSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 36899999999999999999999 79999999998743
No 210
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.77 E-value=1.7e-05 Score=77.52 Aligned_cols=35 Identities=23% Similarity=0.520 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC--CeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~ 61 (507)
+++||+|||||++|++||..|++.| .+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 4689999999999999999999998 4699999864
No 211
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.76 E-value=0.00019 Score=70.62 Aligned_cols=37 Identities=24% Similarity=0.522 Sum_probs=33.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 3578999999999999999999999999999997643
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.75 E-value=1.7e-05 Score=80.23 Aligned_cols=39 Identities=18% Similarity=0.377 Sum_probs=35.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC---CeEEEEecCCCCCc
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS---FKVVLLESRDRVGG 65 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G---~~V~vlE~~~~~GG 65 (507)
+++||+|||||++|++||..|++.| .+|+|+|+++.+|.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~ 75 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF 75 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc
Confidence 3589999999999999999999988 99999999887653
No 213
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.0002 Score=72.16 Aligned_cols=43 Identities=9% Similarity=0.231 Sum_probs=36.3
Q ss_pred ccCCcccCceeEEEEeeCCc--EEEEEcCC-cEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIG--VKVTVEGG-KTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~--v~v~~~~g-~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|..++++ +.|++.+| +++.+|.||+|++..
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 38999999999999886554 67888899 789999999999853
No 214
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.75 E-value=0.00022 Score=72.06 Aligned_cols=45 Identities=18% Similarity=0.051 Sum_probs=37.2
Q ss_pred HhccCCcccCceeEEEEeeCCcEEEEEc--CC--cEEEcCEEEEecCch
Q 010542 251 LAKGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPLG 295 (507)
Q Consensus 251 l~~g~~i~~~~~V~~I~~~~~~v~v~~~--~g--~~~~ad~VI~a~p~~ 295 (507)
|.++++++++++|++|+.+++++.+++. +| +++.+|.||+|++..
T Consensus 225 l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 225 FNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred HhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 3434889999999999998888888775 67 689999999999753
No 215
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.75 E-value=1.8e-05 Score=81.30 Aligned_cols=38 Identities=39% Similarity=0.515 Sum_probs=34.2
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|++|||||.+|+++|++|+++|++|+|+|+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35799999999999999999999999999999997643
No 216
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.75 E-value=0.00019 Score=72.73 Aligned_cols=36 Identities=28% Similarity=0.514 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999997654
No 217
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.75 E-value=1.7e-05 Score=80.34 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=41.6
Q ss_pred HHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 247 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 247 l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
+.+.+. .|+++++++.|++|..+++.+.|++.+|+++.+|.||+|++...
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCc
Confidence 344444 39999999999999987777788889999999999999998643
No 218
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.75 E-value=1.9e-05 Score=77.89 Aligned_cols=38 Identities=24% Similarity=0.429 Sum_probs=34.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRDRVG 64 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~~~G 64 (507)
+.+||+|||||++|++||..|++.|+ +|+|+|+++.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 56899999999999999999999997 599999987654
No 219
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.74 E-value=0.00015 Score=73.08 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=33.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcc
Confidence 478999999999999999999999999999997654
No 220
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.71 E-value=0.00021 Score=71.85 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=38.7
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|+.+++++.+++.+|+++.+|.||+|++..
T Consensus 215 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 4899999999999998788888888899899999999999864
No 221
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.70 E-value=2.7e-05 Score=78.77 Aligned_cols=38 Identities=16% Similarity=0.531 Sum_probs=34.5
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
.+++++|+|||||.+|+++|..|++.+++|+|+|+++.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 45678999999999999999999999999999999763
No 222
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.69 E-value=0.00023 Score=72.48 Aligned_cols=43 Identities=26% Similarity=0.371 Sum_probs=37.0
Q ss_pred ccCCcccCceeEEEEeeCCc----EEEEEcCCc-EEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIG----VKVTVEGGK-TFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~----v~v~~~~g~-~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|..++++ +.|++.+|+ ++.+|.||+|++..
T Consensus 268 ~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 48999999999999986655 678888887 89999999999754
No 223
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=0.00029 Score=71.38 Aligned_cols=43 Identities=16% Similarity=0.171 Sum_probs=36.7
Q ss_pred ccCCcccCceeEEEEeeCC-cEEEEEcCCcE-EEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYI-GVKVTVEGGKT-FVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~-~v~v~~~~g~~-~~ad~VI~a~p~~ 295 (507)
+|++++++++|++|+.+++ .+.|++.+|++ +.+|.||+|++..
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 4899999999999988654 47788889987 9999999999754
No 224
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.68 E-value=0.00026 Score=71.17 Aligned_cols=36 Identities=28% Similarity=0.390 Sum_probs=33.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 478999999999999999999999999999997654
No 225
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.67 E-value=0.00017 Score=72.78 Aligned_cols=43 Identities=28% Similarity=0.241 Sum_probs=36.8
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcC----CcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEG----GKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~----g~~~~ad~VI~a~p~~ 295 (507)
+|++++++++|++|+.+++++.|++.+ |+++.+|.||+|++..
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 488999999999999887777777776 7788999999999754
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=3.1e-05 Score=75.12 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=31.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..||+|||||++|++||..|++.| +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 479999999999999999999999 99999997653
No 227
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.66 E-value=0.00036 Score=70.02 Aligned_cols=43 Identities=28% Similarity=0.351 Sum_probs=36.1
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEc-CC--cEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVE-GG--KTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~-~g--~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|+.+++++.+++. +| +++.+|.||+|++..
T Consensus 225 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 225 LGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred cCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 38999999999999987777777765 56 578999999999754
No 228
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.66 E-value=3.5e-05 Score=79.02 Aligned_cols=36 Identities=28% Similarity=0.572 Sum_probs=33.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC-CCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~ 61 (507)
.+.+|+||||||.+|+++|.+|++. |.+|+|||+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4579999999999999999999986 78999999976
No 229
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.66 E-value=0.00032 Score=70.10 Aligned_cols=35 Identities=26% Similarity=0.603 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 46899999999999999999999999999998654
No 230
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.65 E-value=3.1e-05 Score=78.50 Aligned_cols=39 Identities=23% Similarity=0.329 Sum_probs=35.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (507)
...+|++|||||.+|+++|++|++.|++|+|+|+....+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 356899999999999999999999999999999987654
No 231
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.65 E-value=0.00038 Score=69.92 Aligned_cols=44 Identities=23% Similarity=0.245 Sum_probs=35.5
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEc--CC--cEEEcCEEEEecCchh
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPLGV 296 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~--~g--~~~~ad~VI~a~p~~~ 296 (507)
.|++++++++|++|+.+++++.+++. +| +++.+|.||+|++...
T Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 229 EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEE
T ss_pred CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCccc
Confidence 48999999999999988777777765 66 5789999999998643
No 232
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00015 Score=72.57 Aligned_cols=36 Identities=25% Similarity=0.530 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 478999999999999999999999999999997643
No 233
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.64 E-value=0.00034 Score=70.72 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhC---CCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA---SFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~---G~~V~vlE~~~~~ 63 (507)
..+++|||||..|+-.|..|++. |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 46899999999999999999999 9999999987653
No 234
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.64 E-value=0.00029 Score=71.15 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhC---CCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA---SFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~---G~~V~vlE~~~~~ 63 (507)
..+++|||||..|+-.|..|++. |.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 46899999999999999999998 9999999997653
No 235
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.57 E-value=0.0004 Score=70.16 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHh----CCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHD----ASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~----~G~~V~vlE~~~~ 62 (507)
..+|+|||||..|+-+|..|++ .|.+|+++++.++
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 4789999999999999999987 4788999998654
No 236
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.56 E-value=0.00061 Score=70.20 Aligned_cols=35 Identities=31% Similarity=0.536 Sum_probs=32.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 46899999999999999999999999999999653
No 237
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.55 E-value=0.00035 Score=70.17 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=33.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 3478999999999999999999999999999997643
No 238
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.54 E-value=0.00054 Score=69.19 Aligned_cols=36 Identities=36% Similarity=0.495 Sum_probs=33.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 457899999999999999999999999999999764
No 239
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.52 E-value=5.8e-05 Score=74.96 Aligned_cols=35 Identities=34% Similarity=0.621 Sum_probs=31.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC--CeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDAS--FKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~~ 62 (507)
.++|+|||||.+|++||..|++.+ ++|+|+|+++.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 458999999999999999999865 79999999874
No 240
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.52 E-value=5.5e-05 Score=75.26 Aligned_cols=46 Identities=22% Similarity=0.395 Sum_probs=36.0
Q ss_pred HHHHHHHh-ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCc
Q 010542 245 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 294 (507)
Q Consensus 245 ~~l~~~l~-~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 294 (507)
+.+.+.+. +|++++++++|++++. + .+++++|+++.+|.||+|++.
T Consensus 192 ~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 192 QPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEece
Confidence 44555555 4999999999998753 3 366789999999999999974
No 241
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.48 E-value=0.00069 Score=68.86 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=31.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+++|||||..|+-.|..+++.|.+|+|+++..
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 4679999999999999999999999999998743
No 242
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.47 E-value=0.00097 Score=67.07 Aligned_cols=43 Identities=35% Similarity=0.361 Sum_probs=36.8
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCC---cEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g---~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|+.+++++.+++.++ +++.+|.||+|++..
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 3889999999999999888888777755 578999999999854
No 243
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.46 E-value=6.7e-05 Score=73.76 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=37.0
Q ss_pred cCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCch
Q 010542 254 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 254 g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 295 (507)
|+++++++.|+.++.+++...+++.+|+++.+|.||+++|..
T Consensus 216 gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp SEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEE
T ss_pred CcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcC
Confidence 778999999999998888888899999999999999987643
No 244
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.45 E-value=0.00061 Score=68.60 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=33.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 457899999999999999999999999999998654
No 245
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.44 E-value=0.00081 Score=67.90 Aligned_cols=43 Identities=37% Similarity=0.526 Sum_probs=36.0
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcC---C--cEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~---g--~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|..+++++.+++.+ | +++.+|.||+|++..
T Consensus 252 ~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 389999999999999988887776653 5 578999999999854
No 246
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.43 E-value=0.0016 Score=65.08 Aligned_cols=44 Identities=20% Similarity=0.230 Sum_probs=37.4
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEc---CCc--EEEcCEEEEecCchh
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVE---GGK--TFVADAVVVAVPLGV 296 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~---~g~--~~~ad~VI~a~p~~~ 296 (507)
.|+++++++.|++|..+++++.|++. +|+ ++.+|.||+|++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 38899999999999998888888776 675 489999999998653
No 247
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.43 E-value=0.0011 Score=66.52 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=36.0
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
.|++++++++|++|+.+++.+.|++. +.++.+|.||+|++...
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEE
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCc
Confidence 48999999999999987777777776 45899999999998643
No 248
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.43 E-value=9.5e-05 Score=74.97 Aligned_cols=37 Identities=27% Similarity=0.397 Sum_probs=34.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|++|||||.+|+++|++|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4569999999999999999999999999999999754
No 249
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.42 E-value=0.0024 Score=65.11 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=33.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
....+|+|||+|.+|+-+|..|++.|.+|+|++++++
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4568899999999999999999999999999999764
No 250
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.39 E-value=7.2e-05 Score=76.50 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHh-CCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~ 63 (507)
.+|+||||||.+|+++|.+|++ .|.+|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 58999999997654
No 251
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.39 E-value=0.0012 Score=66.21 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=36.3
Q ss_pred ccCCcccCceeEEEEeeCCc-EEEE-EcCCcEEEcCEEEEecCch
Q 010542 253 KGLDIRLGHRVTKITRHYIG-VKVT-VEGGKTFVADAVVVAVPLG 295 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~-v~v~-~~~g~~~~ad~VI~a~p~~ 295 (507)
.|++++++++|++|..++++ +.|+ +.+|+ +.+|.||+|++..
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 48999999999999987665 6788 88896 9999999999753
No 252
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.35 E-value=0.00012 Score=74.99 Aligned_cols=37 Identities=35% Similarity=0.476 Sum_probs=34.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~~~ 63 (507)
+.+|++|||||.+|+++|++|+++ |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 469999999999999999999998 8999999997654
No 253
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.34 E-value=0.00013 Score=75.25 Aligned_cols=37 Identities=24% Similarity=0.449 Sum_probs=33.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-CCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHD-ASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE~~~~~ 63 (507)
..+|++|||||.+|+++|++|++ .|++|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56999999999999999999999 79999999997543
No 254
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.29 E-value=0.0012 Score=65.72 Aligned_cols=36 Identities=25% Similarity=0.505 Sum_probs=32.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 346899999999999999999999999999999664
No 255
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.28 E-value=0.0016 Score=67.41 Aligned_cols=35 Identities=29% Similarity=0.515 Sum_probs=32.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 46899999999999999999999999999998654
No 256
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.26 E-value=0.0022 Score=64.29 Aligned_cols=41 Identities=22% Similarity=0.326 Sum_probs=35.4
Q ss_pred CCcccCceeEEEEeeC-CcEEEEEc--CCc--EEEcCEEEEecCch
Q 010542 255 LDIRLGHRVTKITRHY-IGVKVTVE--GGK--TFVADAVVVAVPLG 295 (507)
Q Consensus 255 ~~i~~~~~V~~I~~~~-~~v~v~~~--~g~--~~~ad~VI~a~p~~ 295 (507)
++++++++|++|..++ +++.+++. +|+ ++.+|.||+|++..
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCC
Confidence 8899999999999887 78888877 676 79999999999854
No 257
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.25 E-value=0.0021 Score=64.68 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 47899999999999999999999999999998654
No 258
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.21 E-value=0.0024 Score=65.20 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=33.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-.|..|++.+.+|+|++++++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 467899999999999999999999999999999764
No 259
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.20 E-value=0.0019 Score=64.00 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=33.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 468999999999999999999999999999997764
No 260
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.18 E-value=0.0027 Score=59.91 Aligned_cols=35 Identities=37% Similarity=0.496 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 35789999999999999999999999999999865
No 261
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.18 E-value=0.0031 Score=63.45 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=30.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEec
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (507)
..+++|||||..|+-.|..|++.|.+|+|+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 218 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR 218 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 46899999999999999999999999999987
No 262
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.14 E-value=0.002 Score=61.30 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=32.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 457899999999999999999999999999998553
No 263
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.11 E-value=0.0029 Score=64.57 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=33.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
....+|+|||+|.+|+-+|..|++.|.+|+|++++++
T Consensus 189 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 189 FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 3567899999999999999999999999999999764
No 264
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.01 E-value=0.004 Score=59.13 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 35789999999999999999999999999999865
No 265
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.94 E-value=0.0056 Score=61.62 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+++|||||..|+-.|..|++.|.+|+|+|+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 457999999999999999999999999999974
No 266
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.78 E-value=0.0064 Score=58.47 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=32.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 56899999999999999999999999999998653
No 267
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.62 E-value=0.0082 Score=56.76 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=31.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 5789999999999999999999999999999854
No 268
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.46 E-value=0.019 Score=58.13 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=30.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+++|||||..|+-.|..|++.|.+|+|+|+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 346999999999999999999999999999973
No 269
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.42 E-value=0.0074 Score=63.58 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=33.5
Q ss_pred CCCCeEEEEC--ccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 26 ARSPSVIVIG--AGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 26 ~~~~dv~IIG--aGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
....+|+||| +|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 521 ~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 521 PDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp CSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 3456799999 9999999999999999999999986654
No 270
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.37 E-value=0.0089 Score=60.28 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=31.4
Q ss_pred ccCCcccCceeEEEEeeCCcEEEEEcCCc----EEEcCEEEEecCc
Q 010542 253 KGLDIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPL 294 (507)
Q Consensus 253 ~g~~i~~~~~V~~I~~~~~~v~v~~~~g~----~~~ad~VI~a~p~ 294 (507)
.|++|++|+.|++|+.++....+...+|+ ++.||.||.|++.
T Consensus 285 ~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 285 TSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred cceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 39999999999998754333334555663 6899999999974
No 271
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.35 E-value=0.0043 Score=50.39 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=30.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999853
No 272
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.30 E-value=0.0039 Score=58.60 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 46899999999999999999999999999998664
No 273
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.27 E-value=0.0028 Score=61.62 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=33.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 467999999999999999999999999999998765
No 274
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.26 E-value=0.0066 Score=49.52 Aligned_cols=37 Identities=16% Similarity=0.307 Sum_probs=33.3
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+.+|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3456679999999999999999999999999999964
No 275
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.19 E-value=0.0063 Score=50.62 Aligned_cols=36 Identities=19% Similarity=0.420 Sum_probs=32.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
....+|+|||+|..|+..|..|.+.|++|++++++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345789999999999999999999999999999864
No 276
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.10 E-value=0.0064 Score=47.62 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~ 61 (507)
++++|+|+|+|..|...+..|.+.| ++|.+++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 4568999999999999999999999 8999999853
No 277
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.02 E-value=0.0071 Score=49.30 Aligned_cols=34 Identities=35% Similarity=0.441 Sum_probs=31.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.+|+|+|+|-.|...|..|.++|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
No 278
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.94 E-value=0.007 Score=58.40 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=32.7
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 68999999999999999999999999999997754
No 279
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.80 E-value=0.009 Score=56.07 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=31.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||||..|+-+|..|++.|.+|+|+|+..
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 35789999999999999999999999999999743
No 280
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.77 E-value=0.0078 Score=58.84 Aligned_cols=50 Identities=20% Similarity=0.236 Sum_probs=35.6
Q ss_pred cccccccchhhhcccCCCCCCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 6 RSNRQLRRALCYSNNAGKGQARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
-++|...++..++ .+.+.+|+|||.|..||..|..|+++|++|+.+|-+.
T Consensus 5 ~~~~~~~~~~~p~------~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 5 HHHHHHSSGLVPR------GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp --------CCCCT------TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred cccccccCCcCCC------CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3566655555542 2457899999999999999999999999999999753
No 281
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.73 E-value=0.012 Score=55.13 Aligned_cols=33 Identities=30% Similarity=0.492 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+|+|||+|..|.+.|..|+++|++|++++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 467999999999999999999999999999984
No 282
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.63 E-value=0.0094 Score=59.01 Aligned_cols=36 Identities=17% Similarity=0.387 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
.++|+|||.|.+|+++|..|+++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 467999999999999999999999999999997654
No 283
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.56 E-value=0.012 Score=58.58 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=32.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+..+|+|||.|.+|+++|..|+++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45789999999999999999999999999999854
No 284
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.55 E-value=0.015 Score=53.76 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=31.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+|+|||+|..|...|..|+++|++|++++++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999853
No 285
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.51 E-value=0.018 Score=47.71 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=31.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 467999999999999999999999999999986
No 286
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.34 E-value=0.016 Score=54.61 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=31.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 4789999999999999999999999999999864
No 287
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.34 E-value=0.015 Score=47.31 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+.+|+|+|+|..|...|..|.+.|++|++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456999999999999999999999999999985
No 288
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.32 E-value=0.016 Score=54.22 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=31.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||||..|..-|..++.+|++|+|+|.+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999854
No 289
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.27 E-value=0.026 Score=55.53 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=33.2
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
.+..+|+|||+|..|...|..|+++|++|+++|.+..
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3457899999999999999999999999999998654
No 290
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.17 E-value=0.018 Score=54.04 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+..+|+|||+|..|.+.|..|+++|++|++++.+.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999854
No 291
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.15 E-value=0.021 Score=48.88 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=31.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA-SFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~-G~~V~vlE~~~ 61 (507)
...+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 356799999999999999999999 99999999864
No 292
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.10 E-value=0.02 Score=56.57 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=31.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|+|||+|..|+..|..|+++|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999853
No 293
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.03 E-value=0.017 Score=54.33 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|+|||+|..|.+.|..|+++|++|+++.++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 3689999999999999999999999999999864
No 294
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.02 E-value=0.022 Score=53.46 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+++|+|||+|..|.+.|..|++.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 468999999999999999999999999999885
No 295
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.99 E-value=0.022 Score=54.69 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=30.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-+|..|++.|.+|+++|+.++
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 346899999999999999999999999999998654
No 296
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.98 E-value=0.021 Score=50.50 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.7
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|+|||+|-.|...|..|.++|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999854
No 297
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.98 E-value=0.026 Score=52.73 Aligned_cols=36 Identities=33% Similarity=0.439 Sum_probs=32.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 357899999999999999999999999999998653
No 298
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.98 E-value=0.024 Score=56.27 Aligned_cols=37 Identities=30% Similarity=0.474 Sum_probs=33.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC-CC-eEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDA-SF-KVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~-G~-~V~vlE~~~~ 62 (507)
.+.++|+|||+|..|+..|..|+++ |+ +|++++.+..
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3557899999999999999999999 99 9999998765
No 299
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.95 E-value=0.023 Score=56.62 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..++|+|||+|..|+..|..|+++|++|++++.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3589999999999999999999999999999984
No 300
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.93 E-value=0.03 Score=49.08 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=31.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...++|+|||+|..|.+.|..|++.|++|++++++..
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4567899999999999999999999999999998754
No 301
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.92 E-value=0.026 Score=53.17 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=31.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
.+.++|+|||+|-.|.+.|+.|++.|+ +|++++++.
T Consensus 5 ~~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 345799999999999999999999998 999999853
No 302
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.89 E-value=0.026 Score=53.15 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
+.++|+|||+|..|.+.|..|++.|+ +|++++.+.
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 45789999999999999999999998 999999864
No 303
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.81 E-value=0.031 Score=52.38 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=32.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+++|.|||.|..|...|..|++.|++|++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 456799999999999999999999999999999864
No 304
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.79 E-value=0.023 Score=51.79 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=32.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46889999999999999999999999999999753
No 305
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.79 E-value=0.031 Score=51.70 Aligned_cols=33 Identities=21% Similarity=0.155 Sum_probs=30.8
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|+|||+|..|.+.|..|+++|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999999865
No 306
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.72 E-value=0.03 Score=52.33 Aligned_cols=35 Identities=40% Similarity=0.418 Sum_probs=32.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998664
No 307
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.72 E-value=0.037 Score=52.08 Aligned_cols=35 Identities=23% Similarity=0.469 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
..++|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 35789999999999999999999998 999999754
No 308
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.71 E-value=0.035 Score=52.48 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=31.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
+.++|+|||||-.|.+.|..|++.|+ +|+++|.+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 35789999999999999999999998 999999864
No 309
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.70 E-value=0.033 Score=51.48 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=30.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..++|+|||+|..|...|..|+ +|++|++++++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4688999999999999999999 999999999854
No 310
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.67 E-value=0.037 Score=54.27 Aligned_cols=37 Identities=38% Similarity=0.519 Sum_probs=34.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (507)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 5789999999999999999999999999999987653
No 311
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.62 E-value=0.04 Score=52.01 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=31.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
+..+|+|||||..|.+.|+.|++.|+ +|.++|.+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 34689999999999999999999998 999999864
No 312
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.60 E-value=0.035 Score=52.49 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|+|||+|.+|+-+|..|++.|.+|+|+++.+++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 4578999999999999999999999999999997643
No 313
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.57 E-value=0.034 Score=53.27 Aligned_cols=33 Identities=27% Similarity=0.230 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+++|+|||+|..|...|..|++.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999999999999875
No 314
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.57 E-value=0.021 Score=53.09 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 4689999999999999999999999999999863
No 315
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.54 E-value=0.033 Score=52.90 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
.++|+|||+|..|.+.|..|+++|++|+++.+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999974
No 316
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.53 E-value=0.038 Score=52.15 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=30.6
Q ss_pred CCeEEEECccHHHHH-HHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVA-AARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~-aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|.|||.|-+|++ +|..|.++|++|++.|++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999997 7888999999999999865
No 317
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.51 E-value=0.039 Score=52.30 Aligned_cols=36 Identities=31% Similarity=0.439 Sum_probs=32.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 357899999999999999999999999999998654
No 318
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.51 E-value=0.039 Score=51.97 Aligned_cols=35 Identities=31% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 47899999999999999999999999999998653
No 319
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.50 E-value=0.029 Score=52.22 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=32.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
++++|.|||.|..|...|..|++.|++|++++++..
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 457899999999999999999999999999998653
No 320
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.49 E-value=0.043 Score=51.50 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=32.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
.+..+|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 456799999999999999999999998 999999864
No 321
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.43 E-value=0.038 Score=53.91 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=31.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...++|+|||+|..|+..|..|++ |++|++++.+.
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 446789999999999999999998 99999999853
No 322
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.37 E-value=0.037 Score=55.13 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=33.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+|+|||+|.+|+-.|..|++.|.+|+|+++.+.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 4578999999999999999999999999999987653
No 323
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.36 E-value=0.047 Score=54.28 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|..|...|..|+++|++|+++|.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35689999999999999999999999999999853
No 324
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.36 E-value=0.043 Score=51.22 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++++|.|||.|..|...|..|++.|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45789999999999999999999999999998853
No 325
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.35 E-value=0.042 Score=51.38 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|+|||+|..|.+.|..|+ +|++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 478999999999999999999 999999999853
No 326
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.32 E-value=0.041 Score=52.59 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=31.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+.++|+|||+|.-|.+.|..|+++|++|++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3578999999999999999999999999999985
No 327
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.30 E-value=0.042 Score=48.38 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=32.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-+...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 35688999999999999999999999999999874
No 328
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.29 E-value=0.051 Score=48.94 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=31.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 456889999999999999999999999999999853
No 329
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.28 E-value=0.05 Score=54.01 Aligned_cols=37 Identities=35% Similarity=0.371 Sum_probs=34.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (507)
..+++|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4789999999999999999999999999999987653
No 330
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.051 Score=52.34 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999999854
No 331
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.25 E-value=0.046 Score=52.20 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=31.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 25 QARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 25 ~~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.+.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3456899999999999999999999999999999853
No 332
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.24 E-value=0.046 Score=51.83 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=31.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-+.++|.|||+|..|.+.|..|+++|++|+++.++
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35689999999999999999999999999999874
No 333
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.22 E-value=0.049 Score=53.61 Aligned_cols=35 Identities=26% Similarity=0.491 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...|+|||.|..|+..|..|+++|++|++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999999999999999999999999998653
No 334
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.19 E-value=0.031 Score=53.84 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=29.7
Q ss_pred eEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 30 SVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+|+|||+|..|.+.|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 335
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.14 E-value=0.048 Score=51.27 Aligned_cols=34 Identities=29% Similarity=0.466 Sum_probs=29.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-..++|+|||+|..|.+.|..|++.|++|+++ ++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 35678999999999999999999999999999 64
No 336
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.08 E-value=0.049 Score=51.26 Aligned_cols=36 Identities=19% Similarity=0.413 Sum_probs=32.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.+.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 356799999999999999999999999999999853
No 337
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.07 E-value=0.031 Score=55.52 Aligned_cols=35 Identities=20% Similarity=0.408 Sum_probs=32.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..++|+|+|+|-.|.+.|..|.+.|++|+|+|++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 46789999999999999999999999999999964
No 338
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.05 E-value=0.041 Score=51.63 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=30.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
.+++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999985
No 339
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.02 E-value=0.053 Score=50.13 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 340
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.99 E-value=0.048 Score=51.15 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=32.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
..+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 47899999999999999999999999999998653
No 341
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.97 E-value=0.06 Score=50.31 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
+++|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 3689999999999999999999997 999999753
No 342
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.95 E-value=0.056 Score=50.39 Aligned_cols=33 Identities=33% Similarity=0.414 Sum_probs=30.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
++|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 479999999999999999999998 999999853
No 343
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.90 E-value=0.046 Score=53.92 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=30.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|+|||+|..|+..|..|++.|++|++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47999999999999999999999999999985
No 344
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.88 E-value=0.062 Score=50.48 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=32.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC-CeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS-FKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~~ 61 (507)
++++|.|||.|..|.+.|..|++.| ++|++++++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4578999999999999999999999 9999999864
No 345
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.88 E-value=0.053 Score=50.54 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=31.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35789999999999999999999999999998853
No 346
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.87 E-value=0.051 Score=53.85 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=33.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCe-EEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFK-VVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~-V~vlE~~~~~ 63 (507)
...+|+|||+|.+|+-.|..|++.|.+ |+|+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 457899999999999999999999998 9999997654
No 347
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.78 E-value=0.052 Score=51.78 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999853
No 348
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.77 E-value=0.079 Score=49.49 Aligned_cols=34 Identities=35% Similarity=0.527 Sum_probs=31.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
+..+|+|||+|..|.+.|+.|++.|+ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45789999999999999999999999 99999986
No 349
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.72 E-value=0.067 Score=47.05 Aligned_cols=34 Identities=29% Similarity=0.406 Sum_probs=30.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+.++|+|||+|..|...|..|++.|++|.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999999999999999999999999999885
No 350
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.71 E-value=0.07 Score=50.08 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..++|+|||+|..|...|..|++.|++|.+++++.
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34789999999999999999999999999998753
No 351
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.66 E-value=0.041 Score=50.91 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.8
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 352
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.65 E-value=0.053 Score=54.01 Aligned_cols=34 Identities=18% Similarity=0.382 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA--SFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~ 60 (507)
++++|+|||+|..|+..|..|++. |++|++++++
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 457899999999999999999999 8999999875
No 353
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.62 E-value=0.041 Score=44.90 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=30.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+|+|||+|..|...|..|.+.|.+|+|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 578999999999999999999999999999985
No 354
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.59 E-value=0.064 Score=53.43 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=31.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+|+|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999854
No 355
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.56 E-value=0.079 Score=49.49 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=32.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.+.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345789999999999999999999999999998853
No 356
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.56 E-value=0.054 Score=50.31 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=29.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+..+|.+||-|..|...|..|.++|++|++++++.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45689999999999999999999999999999864
No 357
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.56 E-value=0.059 Score=52.46 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=29.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|+|||+|..|+..|..|++ |++|++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 379999999999999999999 9999999985
No 358
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.48 E-value=0.083 Score=50.69 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=31.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
|++|+|||||..|..+|+.+.+.|++|++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5789999999999999999999999999999864
No 359
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.36 E-value=0.06 Score=54.54 Aligned_cols=36 Identities=39% Similarity=0.432 Sum_probs=32.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||||.+|+-+|..|++.|.+|+++|+.++
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 357899999999999999999999999999998654
No 360
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.34 E-value=0.062 Score=55.47 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=30.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 347999999999999999999999999999984
No 361
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.34 E-value=0.087 Score=49.26 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=29.9
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDA--SFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~~ 61 (507)
++|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999985 78999999864
No 362
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.33 E-value=0.062 Score=50.90 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=29.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEec
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (507)
++|+|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3799999999999999999999999999988
No 363
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.31 E-value=0.041 Score=48.65 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=30.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEE-EecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVL-LESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~v-lE~~ 60 (507)
++++|+|||+|..|.+.|..|++.|++|++ ++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 457899999999999999999999999988 6664
No 364
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.30 E-value=0.096 Score=51.95 Aligned_cols=37 Identities=30% Similarity=0.387 Sum_probs=32.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~~ 62 (507)
....+|+|||||.+|+-+|..|.+.|. +|+|+++.++
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 346789999999999999999999997 6999988653
No 365
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.29 E-value=0.1 Score=48.86 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
...+|+|||+|..|.+.|+.|+..|. +|.++|.+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 56899999999999999999999987 89999974
No 366
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.28 E-value=0.085 Score=49.50 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=30.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
+.++|+|||+|-.|.+.|+.|+..|. +|.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35789999999999999999999987 899999853
No 367
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.19 E-value=0.066 Score=53.46 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~ 60 (507)
+++|+|||+|..|+..|..|+++ |++|++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 46899999999999999999998 7999999874
No 368
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=93.15 E-value=0.1 Score=48.63 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=32.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 357899999999999999999999999999998654
No 369
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.14 E-value=0.084 Score=50.28 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=32.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
-...+|+|+|||.+|..+|..|...|. +|.++|++
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 456899999999999999999999998 99999986
No 370
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.11 E-value=0.085 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++++|.|||+|..|...|..|++.|++|++++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4578999999999999999999999999999875
No 371
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.11 E-value=0.08 Score=49.18 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=30.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+++|+|||+|..|...|..|++.|++|.+++++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999999999999875
No 372
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.07 E-value=0.089 Score=49.19 Aligned_cols=36 Identities=36% Similarity=0.483 Sum_probs=32.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 357899999999999999999999999999998654
No 373
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.03 E-value=0.083 Score=49.11 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=30.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
++.+|+|||||..|.+.|+.|+.+|+ +|.++|.+.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 35789999999999999999999998 999999865
No 374
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.03 E-value=0.12 Score=48.52 Aligned_cols=40 Identities=20% Similarity=0.347 Sum_probs=32.7
Q ss_pred CCCCCCCCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 21 AGKGQARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 21 ~~~~~~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
..+......+|+|||+|..|.+.|+.|+.+|. ++.++|.+
T Consensus 12 ~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 12 LKEEQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CC---CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cccccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 33334567899999999999999999999987 89999974
No 375
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.00 E-value=0.11 Score=45.43 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=29.5
Q ss_pred CeEEEEC-ccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIG-AGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIG-aGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|+||| +|..|...|..|++.|++|.+++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3699999 9999999999999999999999874
No 376
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.98 E-value=0.061 Score=50.45 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=29.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhC-----C-CeEEEEec
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA-----S-FKVVLLES 59 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~-----G-~~V~vlE~ 59 (507)
+++|+|||+|..|.+.|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999999 9 99999986
No 377
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.91 E-value=0.13 Score=48.24 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
+..+|+|||+|..|.+.|+.|+..|. +|.++|.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 35789999999999999999999988 999999864
No 378
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.89 E-value=0.13 Score=47.71 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=31.6
Q ss_pred CCCeEEEEC-ccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIG-AGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIG-aGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+..+|+||| +|..|.+.|..|++.|++|.+++++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 345799999 99999999999999999999998754
No 379
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.88 E-value=0.089 Score=49.20 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.3
Q ss_pred CeEEEECccHHHHHHHHHHHhCC--CeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDAS--FKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G--~~V~vlE~~~ 61 (507)
++|+|||+|-.|.+.|..|+++| .+|++++++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 58999999999999999999999 7999999853
No 380
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.86 E-value=0.039 Score=48.86 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..++|.|||+|..|-+.|..|+++|++|+++.+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4578999999999999999999999999999874
No 381
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.85 E-value=0.1 Score=54.90 Aligned_cols=34 Identities=32% Similarity=0.505 Sum_probs=31.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+..+|+|||+|..|...|..|+++|++|+++|.+
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 344 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVN 344 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECC
Confidence 3467999999999999999999999999999985
No 382
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.81 E-value=0.11 Score=48.89 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=30.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
...+|+|||+|..|.+.|+.|+..|. +|.++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 46789999999999999999999887 89999974
No 383
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.79 E-value=0.14 Score=47.23 Aligned_cols=33 Identities=27% Similarity=0.550 Sum_probs=30.7
Q ss_pred CCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+++|+|||+ |..|.+.|..|++.|++|++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999 999999999999999999999874
No 384
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.69 E-value=0.11 Score=49.48 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=32.2
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
-+..+|+|+|||.+|..+|..|...|. +|+|++++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 467899999999999999999999997 89999985
No 385
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.68 E-value=0.093 Score=49.31 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=29.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
++|+|||+|..|.+.|..|++.|+ +|++++.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999998 99999985
No 386
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.66 E-value=0.13 Score=48.06 Aligned_cols=34 Identities=24% Similarity=0.474 Sum_probs=31.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
.++|+|||+|..|.+.|..|++.|+ +|.+++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4789999999999999999999999 999999854
No 387
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.60 E-value=0.069 Score=52.10 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=28.3
Q ss_pred CeEEEECccHHHHHHHHHHHh-CCCeEEEEe
Q 010542 29 PSVIVIGAGMAGVAAARALHD-ASFKVVLLE 58 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~-~G~~V~vlE 58 (507)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 599999998
No 388
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.53 E-value=0.13 Score=51.51 Aligned_cols=37 Identities=30% Similarity=0.522 Sum_probs=33.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRV 63 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~ 63 (507)
...+++|||+|..|+-.|..|++.|.+|+++|+.+++
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 3578999999999999999999999999999998765
No 389
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.52 E-value=0.13 Score=49.86 Aligned_cols=35 Identities=37% Similarity=0.499 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35789999999999999999999999999999853
No 390
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.51 E-value=0.12 Score=46.80 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++++|+|||+|..|...|..|.+.|++|.+++++
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 3468999999999999999999999999999874
No 391
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.43 E-value=0.13 Score=46.23 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC----eEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF----KVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~----~V~vlE~~ 60 (507)
+++|.|||+|..|.+.|..|.+.|+ +|.+++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 4689999999999999999999998 99999885
No 392
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.42 E-value=0.11 Score=51.47 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=32.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999864
No 393
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.38 E-value=0.12 Score=50.31 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
....|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34679999999999999999999999999999864
No 394
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.36 E-value=0.12 Score=48.64 Aligned_cols=35 Identities=31% Similarity=0.319 Sum_probs=30.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC----CeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDAS----FKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G----~~V~vlE~~~ 61 (507)
++++|.|||+|..|.+.|..|.+.| ++|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3568999999999999999999999 7999998753
No 395
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.34 E-value=0.15 Score=49.28 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46789999999999999999999999999999853
No 396
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.32 E-value=0.13 Score=47.50 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=30.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||+|.+|+-+|..|++.| +|+++++.+
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 3578999999999999999999999 999998754
No 397
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.31 E-value=0.083 Score=50.96 Aligned_cols=35 Identities=11% Similarity=0.173 Sum_probs=31.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC-------CeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDAS-------FKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G-------~~V~vlE~~~~ 62 (507)
+++|+|||+|..|.+.|..|+++| ++|++++++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 357999999999999999999999 99999998654
No 398
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.30 E-value=0.092 Score=48.66 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=29.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 4689999999999999999999999999998 54
No 399
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.29 E-value=0.16 Score=46.42 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+...++|+|+|-.|.++|..|++.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 4568999999999999999999999999999875
No 400
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.26 E-value=0.14 Score=46.90 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=29.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|+|||+|..|.+.|..|.+.|++|.+++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 37999999999999999999999999999874
No 401
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.23 E-value=0.15 Score=46.76 Aligned_cols=32 Identities=25% Similarity=0.526 Sum_probs=29.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
++|+|||+|..|.+.|..|++.|+ +|.+++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 579999999999999999999998 89999875
No 402
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.22 E-value=0.12 Score=47.79 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=30.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
++|+|||+|..|.+.|+.|++.|+ +|.++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999987 899999853
No 403
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.17 E-value=0.12 Score=46.91 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=29.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCC-CeEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDAS-FKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G-~~V~vlE~~ 60 (507)
++|.|||+|..|.+.|..|++.| ++|.+++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 37999999999999999999999 999999875
No 404
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.13 E-value=0.14 Score=47.08 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=31.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 45789999999999999999999999999998754
No 405
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.12 E-value=0.079 Score=50.61 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=31.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC-------CeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDAS-------FKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G-------~~V~vlE~~~~ 62 (507)
.++|+|||+|..|.+.|..|++.| ++|++++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 89999998653
No 406
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.12 E-value=0.14 Score=47.95 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
....+|+|||+|..|.+.|+.|+..|. ++.++|.+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 456799999999999999999999887 89999974
No 407
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.05 E-value=0.14 Score=51.17 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+..+|.|||+|..|...|..|+++|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999854
No 408
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.04 E-value=0.18 Score=48.31 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
..+|+|+|+|-.|+.++..|+..|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 378999999999999999999999999999985
No 409
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.96 E-value=0.14 Score=47.82 Aligned_cols=33 Identities=33% Similarity=0.547 Sum_probs=30.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC--eEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~~ 61 (507)
++|+|||+|..|.+.|+.|++.|. +|.++|.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 579999999999999999999886 899999864
No 410
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.89 E-value=0.16 Score=50.51 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHH--------------------hCCC-eEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALH--------------------DASF-KVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~--------------------~~G~-~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++.+.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 4578999999999999999999 5687 7999998653
No 411
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.84 E-value=0.14 Score=53.77 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=31.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+..+|+|||+|..|...|..|+++|++|+++|.+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 35679999999999999999999999999999853
No 412
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.84 E-value=0.21 Score=45.38 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=31.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+++|||+|-+|-++|+.|++.|.+|+|+.++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6789999999999999999999999999998864
No 413
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.81 E-value=0.14 Score=50.08 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..+..|||.|..|+..|..|+++|++|++++.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4678999999999999999999999999999853
No 414
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.79 E-value=0.17 Score=47.77 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+|||.|..|-+.|..|.+.|++|.+++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35679999999999999999999999999999853
No 415
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.75 E-value=0.14 Score=46.43 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=31.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC----CeEEEEecCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDAS----FKVVLLESRDR 62 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G----~~V~vlE~~~~ 62 (507)
+++|.|||+|..|.+.|..|++.| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 468999999999999999999999 79999998654
No 416
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.74 E-value=0.2 Score=48.12 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
....|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34789999999999999999999999999999753
No 417
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.73 E-value=0.13 Score=47.35 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=29.3
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|+|||+|..|...|..|++ |++|.+++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998753
No 418
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.69 E-value=0.15 Score=47.32 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=30.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|.|||+|..|...|..|++.|++|.+++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998753
No 419
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.68 E-value=0.17 Score=50.00 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+...|+|||+|-+|...|..|.+.|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4578999999999999999999999999999974
No 420
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.65 E-value=0.14 Score=51.06 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
.+++|.|||+|..|.+.|..|+++|++|++++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4567999999999999999999999999999885
No 421
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.58 E-value=0.22 Score=44.22 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=31.4
Q ss_pred CCCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.+.|+|.|| |..|...|..|+++|++|.++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4678999998 9999999999999999999998854
No 422
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.54 E-value=0.16 Score=46.40 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=31.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+...++|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4578999999999999999999999999999885
No 423
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=91.49 E-value=0.18 Score=46.74 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=31.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.+|.+||-|..|...|.+|.++|++|+|++++.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5689999999999999999999999999999853
No 424
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.41 E-value=0.22 Score=46.18 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
....|+|||+|-+|.++|+.|++.|. +|+|+.++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45689999999999999999999997 99999875
No 425
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.36 E-value=0.19 Score=47.03 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=30.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
+.++|+|||||-.|.+.|+.|+..|. +|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45799999999999999999998885 89999874
No 426
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.29 E-value=0.17 Score=50.53 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=30.7
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++|.|||+|..|...|..|++.|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999853
No 427
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.25 E-value=0.21 Score=43.96 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=31.5
Q ss_pred CCCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++++|+|+|| |..|...+..|.++|++|.++.++.
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 3578999996 9999999999999999999999863
No 428
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.19 E-value=0.18 Score=45.34 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=30.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
..+|+|||+|-.|..+|..|++.|. +++|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 5789999999999999999999997 89999984
No 429
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.18 E-value=0.25 Score=47.59 Aligned_cols=34 Identities=38% Similarity=0.538 Sum_probs=31.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
....|+|||+|..|+.+|..|+..|.+|++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4678999999999999999999999999999975
No 430
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.15 E-value=0.21 Score=46.80 Aligned_cols=34 Identities=32% Similarity=0.592 Sum_probs=30.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
+..+|+|||+|..|-+.|+.|+..|. +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45799999999999999999998875 89999985
No 431
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=91.14 E-value=0.21 Score=52.85 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=32.3
Q ss_pred CCCeEEEEC--ccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIG--AGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIG--aGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
...+|+||| ||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 457899999 99999999999999999999999866
No 432
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.12 E-value=0.22 Score=45.66 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=30.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC---eEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF---KVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~---~V~vlE~~~ 61 (507)
+++|.|||+|..|.+.|..|.+.|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999998 899999854
No 433
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.09 E-value=0.26 Score=45.77 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=32.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
-...+|+|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 356789999999999999999999999999999853
No 434
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.05 E-value=0.24 Score=46.77 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=30.3
Q ss_pred CCCeEEEECc-cHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 27 RSPSVIVIGA-GMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
...+|+|||+ |..|.++|+.|+..|. +|.++|.+
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 4678999998 9999999999999984 89999974
No 435
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.03 E-value=0.25 Score=45.36 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=31.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+++|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4679999999999999999999999999998864
No 436
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=91.03 E-value=0.19 Score=45.64 Aligned_cols=31 Identities=26% Similarity=0.179 Sum_probs=28.3
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEec
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLES 59 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~ 59 (507)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3799999999999999999999999999755
No 437
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.96 E-value=0.2 Score=46.86 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=30.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
.+.++|+|||||-.|.+.|+.|+..+. ++.++|.+
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 455899999999999999999998876 89999974
No 438
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.93 E-value=0.17 Score=48.37 Aligned_cols=40 Identities=33% Similarity=0.660 Sum_probs=35.3
Q ss_pred CCCeEEEECc-cHHHHHHHHHHHhCCC---eEEEEecCC-CCCce
Q 010542 27 RSPSVIVIGA-GMAGVAAARALHDASF---KVVLLESRD-RVGGR 66 (507)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~---~V~vlE~~~-~~GG~ 66 (507)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 5678999999 9999999999999997 999999975 44665
No 439
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.87 E-value=0.29 Score=45.28 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=32.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
-...+|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 356789999999999999999999999999999853
No 440
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.85 E-value=0.23 Score=47.09 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=30.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
...+|+|||+|.+|+-+|..|++.| +|+++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 4578999999999999999999998 69999885
No 441
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.83 E-value=0.18 Score=50.18 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=30.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999985
No 442
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.44 E-value=0.3 Score=51.20 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=32.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.+-.+|+|||||..|-..|+.++.+|++|+++|.+.
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 346789999999999999999999999999999854
No 443
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.43 E-value=0.33 Score=42.39 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=29.4
Q ss_pred CeEEEECc-cHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|+|+|| |..|...+..|.++|++|.++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 46999996 999999999999999999999885
No 444
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.43 E-value=0.23 Score=45.49 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=31.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
...+|+|||+|-.|-+.|..|.+.|.+|+|++++
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 3568999999999999999999999999999885
No 445
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.43 E-value=0.27 Score=45.69 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=30.8
Q ss_pred CCCCeEEEECcc-HHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAG-MAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-...+++|||+| +.|..+|..|...|.+|+|++++
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 467899999999 67999999999999999988653
No 446
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.35 E-value=0.24 Score=49.26 Aligned_cols=33 Identities=15% Similarity=0.290 Sum_probs=30.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+.+|.|||+|..|...|..|+++|++|.+++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 468999999999999999999999999999985
No 447
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.31 E-value=0.19 Score=45.76 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=30.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCe-EEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFK-VVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~-V~vlE~~ 60 (507)
+++|+|||+|..|...|..|++.|++ |.+++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 36899999999999999999999998 8999875
No 448
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.27 E-value=0.15 Score=45.43 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=30.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
....|+|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 45689999999999999999999999 99999864
No 449
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.22 E-value=0.29 Score=45.92 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=30.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
++.++|+|||||-.|.+.|+.|+..+. ++.++|.+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 456899999999999999999998875 79999974
No 450
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=90.22 E-value=0.23 Score=45.71 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=28.7
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC--eEEEEecC
Q 010542 29 PSVIVIGAGMAGVAAARALHDASF--KVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGaGiaGL~aA~~L~~~G~--~V~vlE~~ 60 (507)
++|+|||||-.|-++|+.|..+|. ++.++|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999998874 79999974
No 451
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=90.15 E-value=0.29 Score=45.75 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=29.9
Q ss_pred CeEEEECc-cHHHHHHHHHHHhCC--CeEEEEecCC
Q 010542 29 PSVIVIGA-GMAGVAAARALHDAS--FKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G--~~V~vlE~~~ 61 (507)
++|+|||| |..|.+.|+.|++.| .+|.++|.+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999988 6899999865
No 452
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.15 E-value=0.29 Score=46.34 Aligned_cols=34 Identities=29% Similarity=0.337 Sum_probs=30.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.++|+|||+|..|.+.|..|++.|++|++++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999998753
No 453
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.09 E-value=0.35 Score=42.36 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=29.5
Q ss_pred CeEEEECc-cHHHHHHHHHHHhCCCeEEEEecC
Q 010542 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
++|+|.|| |..|...+..|.++|++|.++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999998 999999999999999999999875
No 454
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.04 E-value=0.26 Score=50.14 Aligned_cols=35 Identities=17% Similarity=0.361 Sum_probs=32.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
....|+|||+|.+|+-.|..|++.|.+|+|+++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 46789999999999999999999999999999865
No 455
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=89.91 E-value=0.16 Score=55.38 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=33.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASFKVVLLESRDRVG 64 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~G 64 (507)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 4679999999999999999999999999999987653
No 456
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.63 E-value=0.36 Score=43.43 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=30.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
.. +++|||+|-+|-++++.|.+.|. +|+|+.++
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34 89999999999999999999998 89999885
No 457
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.56 E-value=0.33 Score=44.77 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=29.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCeEEEEecC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDA--SFKVVLLESR 60 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~--G~~V~vlE~~ 60 (507)
+++|.|||+|..|.+.|..|++. |++|.+++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 46899999999999999999988 5789999874
No 458
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=89.53 E-value=0.26 Score=49.38 Aligned_cols=36 Identities=19% Similarity=0.330 Sum_probs=30.8
Q ss_pred CCCCeEEEECccHHHHH-HHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVA-AARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~-aA~~L~~~G~~V~vlE~~~ 61 (507)
....+|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 34578999999999997 6999999999999999754
No 459
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=89.52 E-value=0.27 Score=46.17 Aligned_cols=35 Identities=20% Similarity=0.202 Sum_probs=30.3
Q ss_pred CCCeEEEEC-ccHHHHHHHHHHHhCC--CeEEEEecCC
Q 010542 27 RSPSVIVIG-AGMAGVAAARALHDAS--FKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIG-aGiaGL~aA~~L~~~G--~~V~vlE~~~ 61 (507)
+.++|+||| +|..|.+.|+.|+++| .+|.+++...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 457899999 7999999999999998 7899999654
No 460
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.50 E-value=0.47 Score=43.81 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=30.2
Q ss_pred CeEEEECc-cHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
|+|+|.|| |..|...+.+|.++|++|+++-+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999998 9999999999999999999997754
No 461
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.49 E-value=0.3 Score=53.71 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 28 SPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
..+|+|||||.+|+-+|..|++.|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999996 899999876
No 462
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=89.41 E-value=0.34 Score=47.94 Aligned_cols=36 Identities=28% Similarity=0.453 Sum_probs=30.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC--------------------CC-eEEEEecCCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDA--------------------SF-KVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~--------------------G~-~V~vlE~~~~ 62 (507)
...+|+|||+|.+|+-+|..|++. |. +|+|+++.+.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 457899999999999999999974 54 8999998653
No 463
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.37 E-value=0.42 Score=45.48 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=31.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-....|+|+|+|-.|..+|..|.+.|.+|++.+.+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35678999999999999999999999999999864
No 464
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.34 E-value=0.47 Score=44.75 Aligned_cols=37 Identities=16% Similarity=0.321 Sum_probs=32.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
-..++|.|||.|-.|...|..|+..|++|.+++++..
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 3467899999999999999999999999999998643
No 465
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.33 E-value=0.35 Score=44.51 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=29.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+...++|+|+|-.|.++|+.|++.| +|+|+.++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 3568999999999999999999999 99999875
No 466
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.32 E-value=0.26 Score=45.05 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=31.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
...+++|||+|-+|-++|+.|++.|. +|+|+.++.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45789999999999999999999998 899998753
No 467
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.30 E-value=0.5 Score=40.60 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=30.5
Q ss_pred CeEEEECc-cHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 29 PSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 29 ~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.|+|+|| |..|...+..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 67999999 9999999999999999999998853
No 468
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=89.28 E-value=0.16 Score=49.55 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=34.9
Q ss_pred HHHHHHHhc-cCCcccCceeE---------EEEeeCCcEEEEEcCCcEEEcCEEEEecCchh
Q 010542 245 LPVINTLAK-GLDIRLGHRVT---------KITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 296 (507)
Q Consensus 245 ~~l~~~l~~-g~~i~~~~~V~---------~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 296 (507)
+.+.+.+.+ |++++++++|+ +|..+++++.|++.+| +++||.||+|++...
T Consensus 176 ~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 176 LLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 344444443 88999999999 8888777787777777 899999999999764
No 469
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.28 E-value=0.41 Score=47.12 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
....|+|+|+|-.|..+|..|+..|.+|.+.|.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5678999999999999999999999999999875
No 470
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=88.79 E-value=0.073 Score=46.24 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
+.++|.|||+|-.|.+.|..|.+.|++|.+++++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 45679999999999999999999999999998754
No 471
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.16 E-value=0.6 Score=40.84 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=29.8
Q ss_pred CCeEEEECc-cHHHHHHHHHHH-hCCCeEEEEecCC
Q 010542 28 SPSVIVIGA-GMAGVAAARALH-DASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~-~~G~~V~vlE~~~ 61 (507)
+..|+|.|| |-.|...|..|+ +.|++|.++.++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 345999995 999999999999 8999999998853
No 472
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.09 E-value=0.47 Score=43.16 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=30.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56789999999999999999999996 99999874
No 473
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.08 E-value=0.49 Score=43.29 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=31.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
....++|+|+|-+|-+.|+.|++.|. +|+|+.++
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 56789999999999999999999996 99999875
No 474
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.07 E-value=0.4 Score=43.48 Aligned_cols=31 Identities=39% Similarity=0.521 Sum_probs=29.6
Q ss_pred eEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 30 SVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
+|+|||+|-.|.+.|..|.+.|.+|+|++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999999999999885
No 475
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.90 E-value=0.45 Score=43.49 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=31.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
...+++|||+|-+|-++|+.|++.|. +|+|+.++
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999998 89999875
No 476
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.81 E-value=0.52 Score=43.84 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=31.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998 89999886
No 477
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.75 E-value=0.33 Score=44.58 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=30.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
...+|+|||+|-.|..+|.+|++.|. +++|+|..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46789999999999999999999997 89999973
No 478
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=88.69 E-value=0.49 Score=45.41 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.8
Q ss_pred CCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 28 SPSVIVIGA-GMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 28 ~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
++.|+|.|| |..|...+..|.++|++|.++.++.
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 368999998 9999999999999999999998754
No 479
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.56 E-value=0.51 Score=44.20 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
...+|+|||+|=.|..+|.+|+..|. +++|++..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46889999999999999999999997 79999873
No 480
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.46 E-value=0.54 Score=43.03 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=31.4
Q ss_pred CCCCeEEEECcc-HHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAG-MAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-...+|+|||+| +.|..+|..|.+.|.+|+|+.+.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 467899999999 78999999999999999999653
No 481
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.46 E-value=0.56 Score=42.99 Aligned_cols=34 Identities=32% Similarity=0.378 Sum_probs=30.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998 79999875
No 482
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.40 E-value=0.47 Score=42.65 Aligned_cols=34 Identities=32% Similarity=0.432 Sum_probs=30.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~ 60 (507)
...+|+|||+|-.|..+|..|++.|. +++|++..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999997 79999874
No 483
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=88.35 E-value=0.39 Score=45.17 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=30.1
Q ss_pred CCCeEEEECc-cHHHHHHHHHHHhCCC-------eEEEEecC
Q 010542 27 RSPSVIVIGA-GMAGVAAARALHDASF-------KVVLLESR 60 (507)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~-------~V~vlE~~ 60 (507)
+.++|+|+|| |..|...+..|.++|+ +|.+++..
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 4468999998 9999999999999986 89999874
No 484
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.33 E-value=0.57 Score=42.29 Aligned_cols=34 Identities=15% Similarity=0.272 Sum_probs=30.8
Q ss_pred CCCCeEEEECcc-HHHHHHHHHHHhCCCeEEEEec
Q 010542 26 ARSPSVIVIGAG-MAGVAAARALHDASFKVVLLES 59 (507)
Q Consensus 26 ~~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~ 59 (507)
-...+++|||+| +.|..+|..|.+.|.+|+|..+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 467899999976 7999999999999999999976
No 485
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.28 E-value=0.53 Score=44.31 Aligned_cols=36 Identities=31% Similarity=0.381 Sum_probs=32.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
-..++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 346789999999999999999999999999999754
No 486
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.23 E-value=0.56 Score=42.90 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCCCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-...+++|||+ |+.|..+|..|.+.|.+|+|+.+.
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999995 579999999999999999999873
No 487
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.20 E-value=0.37 Score=44.86 Aligned_cols=32 Identities=25% Similarity=0.486 Sum_probs=28.8
Q ss_pred eEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 30 SVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 30 dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
+|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999998888 699999853
No 488
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=88.17 E-value=0.4 Score=42.54 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=30.8
Q ss_pred CCCeEEEEC-ccHHHHHHHHHHHhCC-CeEEEEecCC
Q 010542 27 RSPSVIVIG-AGMAGVAAARALHDAS-FKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIG-aGiaGL~aA~~L~~~G-~~V~vlE~~~ 61 (507)
+++.|+|.| +|..|...|..|+++| ++|+++.++.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 456799999 5999999999999999 8999998854
No 489
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.15 E-value=0.59 Score=46.39 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=32.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.....|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456789999999999999999999999999999853
No 490
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.10 E-value=0.66 Score=43.50 Aligned_cols=35 Identities=9% Similarity=0.271 Sum_probs=31.5
Q ss_pred CCCCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
.+.+.|+|.|| |..|...+..|+++|++|.++.++
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 44578999998 999999999999999999999884
No 491
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.88 E-value=0.61 Score=45.09 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=32.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
-....|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 356889999999999999999999999999999753
No 492
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.76 E-value=0.53 Score=45.04 Aligned_cols=34 Identities=35% Similarity=0.526 Sum_probs=28.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
.++++|+|||||..|-.+|..|++. ++|+|.+.+
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~-~~v~~~~~~ 47 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVN 47 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcC-CCeEEEEcC
Confidence 4567899999999999999999875 789988764
No 493
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.72 E-value=0.92 Score=43.55 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=32.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
.+.++|+|||+|..|...|..+.+.|++|.+++...
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 456789999999999999999999999999998754
No 494
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.58 E-value=0.35 Score=45.41 Aligned_cols=42 Identities=24% Similarity=0.257 Sum_probs=31.6
Q ss_pred hcCCCCceEEeeccccC-----cCCchhhHHHHHHHHHHHHHHHHHH
Q 010542 438 LRIPVDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVL 479 (507)
Q Consensus 438 ~~~~~~~l~~aG~~~~~-----~~~g~~egA~~SG~~aA~~i~~~l~ 479 (507)
..+.++|||.+||.... .....+-+++.||++||+.|++.|.
T Consensus 279 ~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 279 AYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp ECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 45678999999997642 1112455678999999999999875
No 495
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.57 E-value=0.87 Score=42.73 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=31.5
Q ss_pred CCCCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGA-GMAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
.+.+.|+|.|| |..|...+..|.++|++|.++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45678999998 999999999999999999999874
No 496
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=87.53 E-value=0.65 Score=42.16 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=31.2
Q ss_pred CCCCeEEEECcc-HHHHHHHHHHHhCCCeEEEEecC
Q 010542 26 ARSPSVIVIGAG-MAGVAAARALHDASFKVVLLESR 60 (507)
Q Consensus 26 ~~~~dv~IIGaG-iaGL~aA~~L~~~G~~V~vlE~~ 60 (507)
-...+++|||+| +.|..+|..|.+.|.+|+|+.+.
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 467899999999 67999999999999999999653
No 497
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.52 E-value=0.63 Score=43.76 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
..++|.|||.|-.|...|..|+..|++|.+++++.
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~ 197 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSK 197 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 45689999999999999999999999999999864
No 498
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.45 E-value=0.6 Score=43.40 Aligned_cols=36 Identities=25% Similarity=0.360 Sum_probs=31.9
Q ss_pred CCCeEEEECc-cHHHHHHHHHHHhCCCeEEEEecCCC
Q 010542 27 RSPSVIVIGA-GMAGVAAARALHDASFKVVLLESRDR 62 (507)
Q Consensus 27 ~~~dv~IIGa-GiaGL~aA~~L~~~G~~V~vlE~~~~ 62 (507)
++++|+|.|| |..|...+..|.++|++|.++.++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4678999999 99999999999999999999988543
No 499
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.43 E-value=0.58 Score=45.42 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=31.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC-eEEEEecCC
Q 010542 27 RSPSVIVIGAGMAGVAAARALHDASF-KVVLLESRD 61 (507)
Q Consensus 27 ~~~dv~IIGaGiaGL~aA~~L~~~G~-~V~vlE~~~ 61 (507)
....|+|||+|-.|..+|..|...|. +|++++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46789999999999999999999998 899998853
No 500
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.41 E-value=0.88 Score=43.88 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=32.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCeEEEEecCC
Q 010542 26 ARSPSVIVIGAGMAGVAAARALHDASFKVVLLESRD 61 (507)
Q Consensus 26 ~~~~dv~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~ 61 (507)
....+|+|||+|..|...|..+.+.|++|.+++.+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 345789999999999999999999999999998754
Done!