Query 010543
Match_columns 507
No_of_seqs 275 out of 2041
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 09:04:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 4.8E-84 1.7E-88 681.1 53.7 472 35-507 3-475 (554)
2 4b9q_A Chaperone protein DNAK; 100.0 4.8E-83 1.6E-87 679.6 55.0 462 36-507 2-473 (605)
3 3d2f_A Heat shock protein homo 100.0 7.4E-81 2.5E-85 667.1 51.1 464 36-506 2-478 (675)
4 2kho_A Heat shock protein 70; 100.0 1.5E-81 5.2E-86 668.1 44.2 461 37-507 3-473 (605)
5 2v7y_A Chaperone protein DNAK; 100.0 7.8E-76 2.7E-80 614.0 50.7 436 37-507 3-442 (509)
6 3i33_A Heat shock-related 70 k 100.0 2.1E-65 7.2E-70 522.7 46.0 380 34-414 21-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 2E-64 6.9E-69 514.1 45.7 378 35-413 17-394 (394)
8 4gni_A Putative heat shock pro 100.0 3.6E-63 1.2E-67 506.7 41.4 380 34-415 11-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 3.4E-61 1.2E-65 488.1 41.2 371 37-413 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 1.1E-41 3.7E-46 339.8 21.4 309 37-413 4-327 (344)
11 2ych_A Competence protein PILM 100.0 1E-28 3.6E-33 249.1 12.9 321 35-410 12-373 (377)
12 2fsj_A Hypothetical protein TA 100.0 6.1E-29 2.1E-33 246.6 9.2 225 148-410 96-343 (346)
13 3h1q_A Ethanolamine utilizatio 99.9 1.5E-26 5.1E-31 222.6 23.2 204 149-409 69-272 (272)
14 1k8k_A ARP3, actin-like protei 99.9 1.6E-26 5.6E-31 236.0 16.4 225 172-411 107-387 (418)
15 4a2a_A Cell division protein F 99.9 6.8E-27 2.3E-31 236.8 12.8 199 186-412 168-394 (419)
16 2fxu_A Alpha-actin-1, actin, a 99.9 7.8E-26 2.7E-30 227.4 16.8 298 36-410 5-348 (375)
17 2zgy_A Plasmid segregation pro 99.9 4.2E-23 1.4E-27 203.0 12.5 227 146-409 73-319 (320)
18 1k8k_B ARP2, actin-like protei 99.8 2.2E-21 7.7E-26 195.9 3.8 214 173-410 105-363 (394)
19 4ehu_A Activator of 2-hydroxyi 99.8 7.9E-18 2.7E-22 161.8 18.1 179 198-412 69-255 (276)
20 3js6_A Uncharacterized PARM pr 99.8 1.6E-18 5.5E-23 171.7 11.3 203 173-413 114-338 (355)
21 4apw_A ALP12; actin-like prote 99.7 3.2E-18 1.1E-22 168.2 4.0 202 173-411 106-324 (329)
22 3dqg_A Heat shock 70 kDa prote 99.7 1.5E-16 5E-21 136.6 10.2 83 425-507 2-84 (151)
23 3dob_A Heat shock 70 kDa prote 99.7 1.5E-16 5.2E-21 136.6 10.2 83 425-507 2-84 (152)
24 3h0x_A 78 kDa glucose-regulate 99.7 1.8E-16 6.3E-21 136.4 9.0 83 425-507 2-84 (152)
25 3n8e_A Stress-70 protein, mito 99.6 3.6E-16 1.2E-20 138.1 8.7 88 420-507 17-104 (182)
26 4e81_A Chaperone protein DNAK; 99.6 3.8E-16 1.3E-20 142.8 9.1 84 424-507 2-85 (219)
27 3dwl_A Actin-related protein 3 99.6 8E-17 2.7E-21 163.1 4.4 242 150-410 102-395 (427)
28 1q5l_A Chaperone protein DNAK; 99.6 1.6E-16 5.4E-21 133.9 5.0 88 420-507 14-101 (135)
29 3qb0_A Actin-related protein 4 99.6 2.2E-15 7.6E-20 154.0 13.1 180 35-275 22-209 (498)
30 2op6_A Heat shock 70 kDa prote 99.6 2.5E-15 8.4E-20 130.1 9.6 83 425-507 2-84 (152)
31 1u00_A HSC66, chaperone protei 99.5 3.6E-14 1.2E-18 131.0 9.7 81 427-507 2-82 (227)
32 4fo0_A Actin-related protein 8 99.4 9.1E-12 3.1E-16 132.6 21.0 117 149-275 170-293 (593)
33 2d0o_A DIOL dehydratase-reacti 99.3 1E-12 3.5E-17 131.2 7.4 197 186-411 368-604 (610)
34 1nbw_A Glycerol dehydratase re 99.3 1.7E-12 5.9E-17 130.1 7.3 194 187-409 371-604 (607)
35 1hux_A Activator of (R)-2-hydr 99.0 2.3E-08 7.8E-13 95.0 19.5 171 203-412 77-257 (270)
36 4am6_A Actin-like protein ARP8 98.1 1E-05 3.6E-10 83.8 10.2 121 173-309 222-346 (655)
37 2ews_A Pantothenate kinase; PA 97.6 0.00035 1.2E-08 66.0 11.3 47 363-409 237-286 (287)
38 1t6c_A Exopolyphosphatase; alp 97.3 0.0033 1.1E-07 60.5 13.9 80 186-270 98-178 (315)
39 3mdq_A Exopolyphosphatase; str 97.3 0.0085 2.9E-07 57.6 16.3 78 186-269 90-170 (315)
40 2i7n_A Pantothenate kinase 1; 97.2 0.004 1.4E-07 60.5 13.1 71 334-409 278-358 (360)
41 3eno_A Putative O-sialoglycopr 97.2 0.1 3.5E-06 50.5 23.2 69 341-414 233-306 (334)
42 2ivn_A O-sialoglycoprotein end 97.1 0.12 4.2E-06 49.9 23.3 63 343-410 230-297 (330)
43 3r8e_A Hypothetical sugar kina 97.1 0.087 3E-06 50.7 21.8 48 363-410 261-318 (321)
44 3vgl_A Glucokinase; ROK family 97.0 0.039 1.3E-06 53.1 18.9 45 197-243 95-140 (321)
45 4db3_A Glcnac kinase, N-acetyl 96.9 0.12 4.2E-06 49.8 20.9 47 363-409 270-324 (327)
46 3vov_A Glucokinase, hexokinase 96.8 0.14 4.7E-06 48.8 20.3 48 363-410 238-294 (302)
47 2e2o_A Hexokinase; acetate and 96.8 0.39 1.3E-05 45.4 26.4 49 362-411 239-287 (299)
48 2ch5_A NAGK protein; transfera 96.7 0.52 1.8E-05 45.6 24.5 60 171-236 70-132 (347)
49 3cer_A Possible exopolyphospha 96.5 0.004 1.4E-07 60.7 7.3 79 187-269 104-191 (343)
50 2gup_A ROK family protein; sug 96.5 0.17 5.6E-06 47.9 18.7 49 363-411 228-287 (292)
51 2itm_A Xylulose kinase, xylulo 96.3 0.0047 1.6E-07 63.5 6.7 79 336-415 360-438 (484)
52 4htl_A Beta-glucoside kinase; 96.3 0.41 1.4E-05 45.3 19.8 49 363-411 238-291 (297)
53 2qm1_A Glucokinase; alpha-beta 96.2 0.17 5.7E-06 48.7 16.9 50 363-412 263-322 (326)
54 3l0q_A Xylulose kinase; xlylul 96.2 0.0073 2.5E-07 63.1 7.4 87 328-416 408-494 (554)
55 3en9_A Glycoprotease, O-sialog 96.2 0.61 2.1E-05 48.3 21.9 185 171-387 72-273 (540)
56 2zf5_O Glycerol kinase; hypert 96.2 0.0082 2.8E-07 61.8 7.5 78 335-415 367-444 (497)
57 4bc3_A Xylulose kinase; transf 96.2 0.0087 3E-07 62.3 7.7 78 335-414 407-484 (538)
58 3hz6_A Xylulokinase; xylulose, 96.0 0.012 4E-07 60.8 7.9 78 335-416 377-455 (511)
59 3ll3_A Gluconate kinase; xylul 96.0 0.012 4.3E-07 60.5 7.8 79 336-416 367-445 (504)
60 3i8b_A Xylulose kinase; strain 96.0 0.0073 2.5E-07 62.4 6.0 75 336-415 398-475 (515)
61 2hoe_A N-acetylglucosamine kin 95.8 0.69 2.4E-05 45.4 19.3 42 198-242 188-229 (380)
62 1u6z_A Exopolyphosphatase; alp 95.6 0.047 1.6E-06 56.2 10.3 76 188-269 99-176 (513)
63 3g25_A Glycerol kinase; IDP007 95.6 0.013 4.3E-07 60.4 5.9 53 362-416 404-456 (501)
64 2dpn_A Glycerol kinase; thermu 95.6 0.02 7E-07 58.8 7.4 77 336-414 371-448 (495)
65 3ifr_A Carbohydrate kinase, FG 95.6 0.011 3.6E-07 61.1 5.2 53 362-416 400-452 (508)
66 3ezw_A Glycerol kinase; glycer 95.5 0.02 6.8E-07 59.3 7.3 83 329-416 371-454 (526)
67 2ap1_A Putative regulator prot 95.5 0.55 1.9E-05 45.0 16.9 43 198-242 120-163 (327)
68 4e1j_A Glycerol kinase; struct 95.5 0.0097 3.3E-07 61.6 4.5 53 362-416 425-477 (520)
69 3jvp_A Ribulokinase; PSI-II, N 95.4 0.012 4.2E-07 61.6 5.1 80 330-414 410-490 (572)
70 3h3n_X Glycerol kinase; ATP-bi 95.4 0.015 5.2E-07 59.9 5.6 53 362-416 403-455 (506)
71 2p3r_A Glycerol kinase; glycer 95.4 0.012 4.1E-07 60.8 4.8 53 362-416 401-453 (510)
72 3bex_A Type III pantothenate k 95.3 0.17 5.9E-06 46.6 12.0 21 37-57 4-24 (249)
73 3htv_A D-allose kinase, alloki 95.2 2.1 7.1E-05 40.7 19.7 50 362-411 239-299 (310)
74 2d4w_A Glycerol kinase; alpha 95.0 0.043 1.5E-06 56.5 7.8 52 362-415 403-454 (504)
75 2w40_A Glycerol kinase, putati 95.0 0.022 7.7E-07 58.6 5.4 51 363-415 407-458 (503)
76 1z6r_A MLC protein; transcript 94.7 1.4 4.9E-05 43.5 17.8 43 198-242 186-229 (406)
77 2uyt_A Rhamnulokinase; rhamnos 94.6 0.031 1E-06 57.4 5.3 47 362-411 393-439 (489)
78 1z05_A Transcriptional regulat 93.8 2.9 0.0001 41.6 17.9 43 198-242 208-251 (429)
79 1zbs_A Hypothetical protein PG 93.6 3.9 0.00013 38.3 17.6 70 336-412 210-281 (291)
80 3h6e_A Carbohydrate kinase, FG 92.1 0.17 5.8E-06 51.6 5.8 72 335-412 362-436 (482)
81 1zc6_A Probable N-acetylglucos 90.7 11 0.00037 35.3 25.5 64 337-410 227-292 (305)
82 3o8m_A Hexokinase; rnaseh-like 90.0 1.6 5.4E-05 44.1 10.5 57 185-244 185-243 (485)
83 2yhx_A Hexokinase B; transfera 88.7 0.7 2.4E-05 46.5 6.9 55 186-243 164-220 (457)
84 3hi0_A Putative exopolyphospha 88.4 1.1 3.7E-05 45.9 8.1 77 186-268 101-178 (508)
85 3ven_A O-carbamoyltransferase 87.9 26 0.00089 36.0 17.9 79 331-414 280-360 (576)
86 3qbx_A Anhydro-N-acetylmuramic 87.8 0.96 3.3E-05 43.8 6.8 74 336-412 260-337 (371)
87 3cqy_A Anhydro-N-acetylmuramic 83.9 2 6.9E-05 41.5 6.9 73 336-412 267-343 (370)
88 3ttc_A HYPF, transcriptional r 83.0 3 0.0001 43.7 8.3 50 362-411 599-651 (657)
89 4g9i_A Hydrogenase maturation 80.8 4.2 0.00014 43.7 8.6 50 363-412 706-760 (772)
90 1bdg_A Hexokinase; phosphotran 79.4 6.2 0.00021 39.5 8.9 56 185-243 172-229 (451)
91 3vth_A Hydrogenase maturation 78.8 3.1 0.00011 44.5 6.8 52 363-414 694-750 (761)
92 3ezw_A Glycerol kinase; glycer 77.4 1.4 4.7E-05 45.4 3.5 22 34-55 2-23 (526)
93 3mcp_A Glucokinase; structural 77.1 11 0.00036 36.7 9.6 23 34-56 7-29 (366)
94 1iv0_A Hypothetical protein; r 75.7 1.9 6.4E-05 33.2 3.0 20 37-56 2-21 (98)
95 3h6e_A Carbohydrate kinase, FG 75.3 1.3 4.3E-05 45.1 2.5 21 35-55 5-25 (482)
96 3aap_A Ectonucleoside triphosp 74.8 5.2 0.00018 38.6 6.6 42 202-243 110-158 (353)
97 2yhw_A Bifunctional UDP-N-acet 73.9 18 0.00061 34.5 10.4 43 198-242 131-174 (343)
98 3epq_A Putative fructokinase; 73.6 9.1 0.00031 36.0 7.9 44 197-242 96-140 (302)
99 3hz6_A Xylulokinase; xylulose, 73.6 1.9 6.5E-05 44.1 3.4 21 35-55 4-24 (511)
100 3ifr_A Carbohydrate kinase, FG 73.0 2.5 8.6E-05 43.2 4.1 21 35-55 6-26 (508)
101 3l0q_A Xylulose kinase; xlylul 72.6 2.4 8.2E-05 43.9 3.9 21 35-55 4-24 (554)
102 3ll3_A Gluconate kinase; xylul 71.7 2.2 7.6E-05 43.5 3.4 21 35-55 3-23 (504)
103 2p3r_A Glycerol kinase; glycer 71.6 2.4 8.2E-05 43.4 3.6 21 35-55 2-22 (510)
104 3i8b_A Xylulose kinase; strain 71.2 2.8 9.6E-05 42.9 4.0 20 35-54 4-23 (515)
105 3hm8_A Hexokinase-3; glucose, 69.2 16 0.00054 36.3 8.7 56 186-244 161-219 (445)
106 2uyt_A Rhamnulokinase; rhamnos 68.9 2.6 8.8E-05 42.8 3.1 20 35-54 3-22 (489)
107 1nu0_A Hypothetical protein YQ 68.9 4 0.00014 33.5 3.6 20 37-56 4-23 (138)
108 1cza_N Hexokinase type I; stru 68.8 13 0.00046 40.8 8.9 57 184-243 630-689 (917)
109 1cza_N Hexokinase type I; stru 68.4 15 0.00051 40.4 9.2 56 185-243 183-241 (917)
110 3h3n_X Glycerol kinase; ATP-bi 68.0 3.6 0.00012 42.0 4.0 21 35-55 4-24 (506)
111 3djc_A Type III pantothenate k 67.9 3.9 0.00013 37.8 3.8 71 329-410 182-254 (266)
112 1sz2_A Glucokinase, glucose ki 67.5 83 0.0028 29.6 25.1 41 196-236 99-150 (332)
113 4bc3_A Xylulose kinase; transf 66.1 4.1 0.00014 42.0 4.0 21 35-55 9-29 (538)
114 2ews_A Pantothenate kinase; PA 66.1 3.6 0.00012 38.5 3.2 24 34-57 18-41 (287)
115 4e1j_A Glycerol kinase; struct 65.6 3.6 0.00012 42.2 3.4 22 36-57 26-48 (520)
116 1vhx_A Putative holliday junct 64.1 3.6 0.00012 34.3 2.5 20 37-56 4-23 (150)
117 3cj1_A Ectonucleoside triphosp 63.6 14 0.00047 37.0 7.1 43 201-243 150-208 (456)
118 2aa4_A Mannac kinase, putative 62.3 9.8 0.00034 35.2 5.6 47 363-409 234-286 (289)
119 3g25_A Glycerol kinase; IDP007 62.3 4.6 0.00016 41.1 3.4 20 36-55 6-25 (501)
120 2w40_A Glycerol kinase, putati 61.7 4.6 0.00016 41.2 3.3 20 36-55 4-23 (503)
121 3f9m_A Glucokinase; hexokinase 61.0 19 0.00064 36.1 7.4 57 185-244 184-243 (470)
122 3cet_A Conserved archaeal prot 60.7 6.4 0.00022 37.4 3.8 39 202-243 107-145 (334)
123 2dpn_A Glycerol kinase; thermu 60.3 4.5 0.00016 41.1 3.0 20 36-55 2-21 (495)
124 3jvp_A Ribulokinase; PSI-II, N 59.8 5 0.00017 41.6 3.3 21 35-55 4-24 (572)
125 2zf5_O Glycerol kinase; hypert 58.7 5.4 0.00019 40.5 3.2 20 36-55 3-22 (497)
126 1hjr_A Holliday junction resol 55.7 15 0.00051 30.8 4.9 18 37-54 2-19 (158)
127 3o8m_A Hexokinase; rnaseh-like 53.9 37 0.0013 34.2 8.3 56 223-278 78-139 (485)
128 2d4w_A Glycerol kinase; alpha 50.7 8.7 0.0003 39.1 3.2 19 37-55 3-21 (504)
129 3zx3_A Ectonucleoside triphosp 50.2 28 0.00097 34.6 6.7 42 202-243 151-199 (452)
130 1saz_A Probable butyrate kinas 49.7 26 0.00089 34.0 6.4 49 362-410 295-347 (381)
131 2itm_A Xylulose kinase, xylulo 49.4 8.8 0.0003 38.8 3.0 20 38-57 2-22 (484)
132 2yhx_A Hexokinase B; transfera 48.6 75 0.0026 31.6 9.6 56 223-278 59-120 (457)
133 3zyy_X Iron-sulfur cluster bin 48.5 32 0.0011 35.8 7.0 59 324-383 497-555 (631)
134 1msz_A DNA-binding protein smu 48.4 17 0.00059 26.9 3.6 28 175-202 34-61 (86)
135 2h3g_X Biosynthetic protein; p 47.1 14 0.00049 33.9 3.8 72 329-410 180-251 (268)
136 4ep4_A Crossover junction endo 46.4 14 0.00049 31.2 3.4 19 36-54 1-19 (166)
137 1woq_A Inorganic polyphosphate 46.1 13 0.00045 34.0 3.4 25 30-54 6-30 (267)
138 3zyy_X Iron-sulfur cluster bin 44.8 57 0.002 33.9 8.2 97 224-376 205-303 (631)
139 4am6_A Actin-like protein ARP8 44.1 9.3 0.00032 39.8 2.2 47 340-386 476-524 (655)
140 1nbw_A Glycerol dehydratase re 40.2 17 0.00058 37.1 3.3 32 173-204 131-162 (607)
141 3epq_A Putative fructokinase; 39.5 41 0.0014 31.3 5.8 20 36-55 3-22 (302)
142 1hnj_A Beta-ketoacyl-acyl carr 38.7 36 0.0012 31.8 5.3 49 335-386 210-258 (317)
143 3cet_A Conserved archaeal prot 37.0 21 0.00072 33.9 3.2 38 38-75 2-44 (334)
144 1zxo_A Conserved hypothetical 36.7 15 0.0005 34.2 2.1 67 339-410 211-277 (291)
145 2f9w_A Pantothenate kinase; CO 36.7 30 0.001 31.9 4.1 21 37-57 24-45 (271)
146 1saz_A Probable butyrate kinas 34.0 34 0.0012 33.2 4.4 21 36-56 2-22 (381)
147 1zxo_A Conserved hypothetical 33.8 4.7 0.00016 37.7 -1.9 59 172-236 58-118 (291)
148 2yhw_A Bifunctional UDP-N-acet 33.6 82 0.0028 29.7 7.0 22 36-57 30-52 (343)
149 3f9m_A Glucokinase; hexokinase 33.0 1E+02 0.0035 30.7 7.6 25 223-247 75-99 (470)
150 1bdg_A Hexokinase; phosphotran 32.4 1.3E+02 0.0046 29.7 8.5 24 223-246 66-89 (451)
151 3nuw_A 2-OXO-3-deoxygalactonat 31.9 35 0.0012 31.8 3.8 43 364-409 248-290 (295)
152 1ub7_A 3-oxoacyl-[acyl-carrier 31.9 51 0.0017 30.8 5.1 48 336-386 213-260 (322)
153 2q2r_A Glucokinase 1, putative 31.3 48 0.0017 31.9 4.9 21 35-55 28-48 (373)
154 2ebd_A 3-oxoacyl-[acyl-carrier 30.7 55 0.0019 30.3 5.1 47 337-386 204-250 (309)
155 3hm8_A Hexokinase-3; glucose, 28.6 1.7E+02 0.0057 29.0 8.2 29 223-252 57-85 (445)
156 3kbq_A Protein TA0487; structu 28.0 92 0.0031 26.3 5.5 40 345-392 52-93 (172)
157 2q2r_A Glucokinase 1, putative 24.5 46 0.0016 32.0 3.4 18 198-215 127-144 (373)
158 2x3e_A 3-oxoacyl-[acyl-carrier 24.5 52 0.0018 30.9 3.7 47 337-386 218-264 (331)
159 1zow_A 3-oxoacyl-[acyl-carrier 24.1 56 0.0019 30.3 3.9 48 336-386 205-252 (313)
160 2d0o_A DIOL dehydratase-reacti 23.5 72 0.0025 32.5 4.5 32 172-203 128-159 (610)
161 1mzj_A Beta-ketoacylsynthase I 23.4 49 0.0017 31.2 3.3 47 337-386 225-271 (339)
162 2qm1_A Glucokinase; alpha-beta 23.4 1.5E+02 0.0053 27.3 6.9 27 225-251 6-32 (326)
163 4dfe_A 3-oxoacyl-[acyl-carrier 23.3 1.8E+02 0.0061 27.2 7.3 47 337-386 228-274 (333)
164 3eno_A Putative O-sialoglycopr 22.0 1.4E+02 0.0048 28.2 6.2 43 339-381 50-92 (334)
165 2ap1_A Putative regulator prot 21.8 2.3E+02 0.0078 26.2 7.7 52 224-276 23-74 (327)
166 4gic_A HDH, histidinol dehydro 21.5 1.2E+02 0.0041 29.6 5.5 71 172-243 160-249 (423)
167 1zc6_A Probable N-acetylglucos 21.4 2.1E+02 0.0071 26.2 7.3 53 225-277 11-64 (305)
168 2ivn_A O-sialoglycoprotein end 21.1 1.5E+02 0.0051 27.8 6.2 43 338-380 44-86 (330)
169 4f02_C Eukaryotic translation 21.0 49 0.0017 17.8 1.5 16 256-271 6-21 (27)
170 3lm2_A Putative kinase; struct 20.7 51 0.0017 29.3 2.6 39 197-242 90-128 (226)
171 3nq4_A 6,7-dimethyl-8-ribityll 20.6 70 0.0024 26.6 3.2 61 321-385 9-70 (156)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4.8e-84 Score=681.08 Aligned_cols=472 Identities=69% Similarity=1.069 Sum_probs=446.2
Q ss_pred CCcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHH
Q 010543 35 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKE 114 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 114 (507)
++.+||||||||||++|++.+|.++++.+++|++++||+|+|.++++++|++|+.....+|+++++++|+++|+.++++.
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 010543 115 VQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDA 194 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~a 194 (507)
++..++.+||.++..+|.+.+.+.+ .+..+.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|
T Consensus 83 v~~~~~~~p~~v~~~~g~~~~~v~~-~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 83 VQSDMKHWPFMVVNDAGRPKVQVEY-KGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHTTCSSEEEEETTEEEEEEEE-TTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEecCCceEEEEEE-CCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999778999888887 666788999999999999999999999998899999999999999999999999
Q ss_pred HHHcCCceeEeechhhHHHHHhhcccCC-CceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHH
Q 010543 195 GIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYF 273 (507)
Q Consensus 195 a~~agl~~~~li~Ep~Aaa~~~~~~~~~-~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l 273 (507)
++.||++++++++||+|||++|++.... .+..++|||+||||+|++++++.++.++++++.++..+||++||+.|++++
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l 241 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHF 241 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999887643 468899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHHHHH
Q 010543 274 IKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAM 353 (507)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l 353 (507)
.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+.++.++..+|+|++|+++++|+++++.++++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L 321 (554)
T 1yuw_A 242 IAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKAL 321 (554)
T ss_dssp HHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred HHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCCCCCCcceEEEeccccee
Q 010543 354 EDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTL 433 (507)
Q Consensus 354 ~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~~~ 433 (507)
+++++.+.+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++......+++++.|++|++|
T Consensus 322 ~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~sl 401 (554)
T 1yuw_A 322 RDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSL 401 (554)
T ss_dssp HHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCE
T ss_pred HHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEE
Confidence 99999989999999999999999999999999977888889999999999999999998874323366888999999999
Q ss_pred eEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcCCCC
Q 010543 434 GIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVSAFN 507 (507)
Q Consensus 434 gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~~i~ 507 (507)
|++..++.+.++|++|++||.++++.|++..|+|+.+.|.||||++....+|..||+|+|+|+||+|+|+++|+
T Consensus 402 gi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~ 475 (554)
T 1yuw_A 402 GIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475 (554)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEE
T ss_pred EEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998874
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.8e-83 Score=679.63 Aligned_cols=462 Identities=54% Similarity=0.906 Sum_probs=435.7
Q ss_pred CcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecC-CcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHH
Q 010543 36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKE 114 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 114 (507)
+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.+ +.+++|.+|+.....+|.++++++|+++|+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 4699999999999999999999999999999999999999975 489999999999999999999999999999999999
Q ss_pred HHhhcccCCeEEe-ccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHH
Q 010543 115 VQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKD 193 (507)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~ 193 (507)
++...+.+||.++ ..+|...+.+ . .+.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~---~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV---K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE---T--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE---C--CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 9999999999998 5566655543 2 36899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeC----CeEEEEEEcCCCCCchHHHHHHH
Q 010543 194 AGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNGDTHLGGEDFDQRV 269 (507)
Q Consensus 194 aa~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~----~~~~v~~~~~~~~~GG~~id~~l 269 (507)
|++.||++++++++||+|||++|++.....+..++|||+||||+|++++++.+ +.++++++.++..+||++||+.|
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 99999999999999999999999988766778999999999999999999988 89999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCC----cceEEeecHHHHHHHHHHHHHHH
Q 010543 270 MEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRARFEELNNDLFRKT 345 (507)
Q Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~----~~~~~~itr~~~e~~~~~~~~~i 345 (507)
++++.++|+++++.+...+++.+.+|+.+||++|+.||...+..+.++.+..+ .++.++|+|++|+++++|+++++
T Consensus 237 ~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i 316 (605)
T 4b9q_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988888766543 67889999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCCCCCCcceEE
Q 010543 346 MGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILL 425 (507)
Q Consensus 346 ~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~ 425 (507)
.++++++|+++++...+|+.|+||||+|++|+|++.|++.| +.++....||+++||+|||++|+.+++. .+++++
T Consensus 317 ~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l 391 (605)
T 4b9q_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp THHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEE
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEE
Confidence 99999999999999999999999999999999999999999 7888899999999999999999999875 458999
Q ss_pred EecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcCC
Q 010543 426 LDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVSA 505 (507)
Q Consensus 426 ~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~~ 505 (507)
.|++|+++|++..+|.+.+||++|+++|+++++.|++..|+|+.+.|.||||++....+|..||+|+|+|+||+|+|+++
T Consensus 392 ~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 4b9q_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp ECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCC
T ss_pred EeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 010543 506 FN 507 (507)
Q Consensus 506 i~ 507 (507)
|+
T Consensus 472 i~ 473 (605)
T 4b9q_A 472 IE 473 (605)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=7.4e-81 Score=667.10 Aligned_cols=464 Identities=30% Similarity=0.489 Sum_probs=431.0
Q ss_pred CcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHHH
Q 010543 36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEV 115 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 115 (507)
+.+||||||||||+||++.+|.++++.|+.|++.+||+|+|.++++++|.+|+.....+|.++++++|++||+.+++..+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred HhhcccCCeEEe-ccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 010543 116 QRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDA 194 (507)
Q Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~a 194 (507)
+...+.+||.++ ..+|...+.+.+ .|+.+.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~-~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRF-AGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEE-TTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEe-CCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 999999999998 457888888777 666788999999999999999999999998899999999999999999999999
Q ss_pred HHHcCCceeEeechhhHHHHHhhcccC------CCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHH
Q 010543 195 GIIAGLNVARIINEPTAAAIAYGLDKK------GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQR 268 (507)
Q Consensus 195 a~~agl~~~~li~Ep~Aaa~~~~~~~~------~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~ 268 (507)
++.||++++++++||+|||++|++.+. ..+.+++|||+||||+|++++++.++.++++++.++..+||++||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 999999999999999999999987652 35688999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHH
Q 010543 269 VMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGP 348 (507)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 348 (507)
|++++.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+.++.++.++|+|++|+++++|+++++.++
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~ 320 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP 320 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998899999999999999999999999889999988888899999999999999999999999999
Q ss_pred HHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCCCCCCcceEEEec
Q 010543 349 VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDV 428 (507)
Q Consensus 349 i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~ 428 (507)
++++|+++++++.+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++... ++++.+.|+
T Consensus 321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~~~--v~~~~l~Dv 397 (675)
T 3d2f_A 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTLR--VRPFKFEDI 397 (675)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSSCC--CCCCEEEEE
T ss_pred HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCCCc--ccceEEEee
Confidence 99999999999899999999999999999999999999 677888899999999999999999987654 678999999
Q ss_pred ccceeeEEEeCC----EEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcc-cCcceeEEEEeCCCCCCCCc
Q 010543 429 APLTLGIETVGG----VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTK-DCRLLGKFDLSGIPPAPRFV 503 (507)
Q Consensus 429 ~~~~~gi~~~~~----~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~-~~~~ig~~~l~~~p~~~~g~ 503 (507)
+|+++|+++.++ .+.+||++|+++|++++.+|++..|++ +.+. |+|++.++. +|..||+|.|+|+||+|+|+
T Consensus 398 ~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~ 474 (675)
T 3d2f_A 398 HPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQD 474 (675)
T ss_dssp ECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSCS
T ss_pred eecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCCC
Confidence 999999999876 499999999999999999998765543 3332 779998887 99999999999999999998
Q ss_pred C-CC
Q 010543 504 S-AF 506 (507)
Q Consensus 504 ~-~i 506 (507)
+ +|
T Consensus 475 ~~~i 478 (675)
T 3d2f_A 475 SVPV 478 (675)
T ss_dssp CEEE
T ss_pred cceE
Confidence 5 55
No 4
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.5e-81 Score=668.10 Aligned_cols=461 Identities=55% Similarity=0.918 Sum_probs=429.7
Q ss_pred cEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEec-CCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHHH
Q 010543 37 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEV 115 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 115 (507)
.+||||||||||++|++.+|.++++.|++|++++||+|+|. ++++++|++|+.....+|+++++++|+++|+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 58999999999999999999999999999999999999995 45799999999999999999999999999999988888
Q ss_pred HhhcccCCeEEe-ccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 010543 116 QRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDA 194 (507)
Q Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~a 194 (507)
+...+.+||.++ ..+|.+.+.+ +| +.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~---~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV---KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE---TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE---CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 888888999987 6677766654 33 58999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEe----CCeEEEEEEcCCCCCchHHHHHHHH
Q 010543 195 GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVM 270 (507)
Q Consensus 195 a~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~----~~~~~v~~~~~~~~~GG~~id~~l~ 270 (507)
++.||++++++++||+|||++|++.....+..++|||+||||+|++++++. ++.++++++.++..+||++||+.|+
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~ 237 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHH
Confidence 999999999999999999999988764467899999999999999999998 7899999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCC----cceEEeecHHHHHHHHHHHHHHHH
Q 010543 271 EYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRARFEELNNDLFRKTM 346 (507)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~----~~~~~~itr~~~e~~~~~~~~~i~ 346 (507)
+++.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+.++ .++.++|+|++|+++++|+++++.
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~ 317 (605)
T 2kho_A 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSI 317 (605)
T ss_dssp HHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHH
Confidence 9999999999999988899999999999999999999998888888876542 567789999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCCCCCCcceEEE
Q 010543 347 GPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 426 (507)
Q Consensus 347 ~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~ 426 (507)
++++++|+++++.+.+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. .+++++.
T Consensus 318 ~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~ 392 (605)
T 2kho_A 318 EPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLL 392 (605)
T ss_dssp SHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCS
T ss_pred HHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceEE
Confidence 9999999999998899999999999999999999999999 6788889999999999999999988764 4578889
Q ss_pred ecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcCCC
Q 010543 427 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVSAF 506 (507)
Q Consensus 427 ~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~~i 506 (507)
|++|+++|+++.++.+.++|++|+++|++++..|++..|+|+.+.|.||||++.+..+|..||+|.|+|+||+|+|+++|
T Consensus 393 dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i 472 (605)
T 2kho_A 393 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQI 472 (605)
T ss_dssp BCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCE
T ss_pred eeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred C
Q 010543 507 N 507 (507)
Q Consensus 507 ~ 507 (507)
+
T Consensus 473 ~ 473 (605)
T 2kho_A 473 E 473 (605)
T ss_dssp E
T ss_pred E
Confidence 4
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=7.8e-76 Score=613.99 Aligned_cols=436 Identities=59% Similarity=0.966 Sum_probs=405.4
Q ss_pred cEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHHHH
Q 010543 37 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQ 116 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 116 (507)
.+||||||||||++|++.+|.++++.+++|++++||+|+|.++.+++|++|+.....+| ++++++|+++|+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 58999999999999999999999999999999999999998778999999999998999 999999999997432
Q ss_pred hhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHH
Q 010543 117 RDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGI 196 (507)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~aa~ 196 (507)
+.+ +| ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 77 --------------------~~~-~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 --------------------VEI-EG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp --------------------EEE-TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred --------------------EEE-CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 112 33 4688999999999999999999999889999999999999999999999999
Q ss_pred HcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHH
Q 010543 197 IAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKL 276 (507)
Q Consensus 197 ~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~ 276 (507)
.||++++++++||+|||++|++... .+..++|||+||||+|++++++.++.++++++.++..+||++||+.|++++.++
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~ 212 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQ 212 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999988664 578999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccC---C-cceEEeecHHHHHHHHHHHHHHHHHHHHHH
Q 010543 277 IKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFD---G-IDFSEPLTRARFEELNNDLFRKTMGPVKKA 352 (507)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~i~~~i~~~ 352 (507)
|+++++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.+ | .++.++|+|++|+++++|+++++.++++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~ 292 (509)
T 2v7y_A 213 FKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQA 292 (509)
T ss_dssp HHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHH
T ss_pred HHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888889999999999999999999999888888876654 2 457789999999999999999999999999
Q ss_pred HHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCCCCCCcceEEEecccce
Q 010543 353 MEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLT 432 (507)
Q Consensus 353 l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~~ 432 (507)
|+++++.+.+++.|+|+||+|++|+|++.|++.| +.++....||+++||+|||++|+.+++. .+++++.|++|++
T Consensus 293 L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~s 367 (509)
T 2v7y_A 293 LQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLS 367 (509)
T ss_dssp HHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSE
T ss_pred HHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeeccc
Confidence 9999998889999999999999999999999999 6778889999999999999999988764 3478889999999
Q ss_pred eeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcCCCC
Q 010543 433 LGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVSAFN 507 (507)
Q Consensus 433 ~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~~i~ 507 (507)
||+++.++.+.++|++|+++|.+++..|++..|+|+.+.|.||||++....+|..||+|.|+|+||.|+|+++|+
T Consensus 368 lgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~ 442 (509)
T 2v7y_A 368 LGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIE 442 (509)
T ss_dssp EEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEE
T ss_pred cceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998874
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=2.1e-65 Score=522.71 Aligned_cols=380 Identities=70% Similarity=1.082 Sum_probs=360.9
Q ss_pred cCCcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCH
Q 010543 34 KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDK 113 (507)
Q Consensus 34 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 113 (507)
..+.+||||||||||++|++.+|.++++.++.|++++||+|+|.++.+++|.+|+.....+|.++++++|+++|++++++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHH
Q 010543 114 EVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKD 193 (507)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~ 193 (507)
.++...+.+||.++..+|.+.+.+.+ .+....++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++
T Consensus 101 ~~~~~~~~~p~~~~~~~g~~~~~v~~-~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 101 TVQSDMKHWPFRVVSEGGKPKVQVEY-KGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEEE-TTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCceEEccCCceEEEEEe-CCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 99999999999999889999999988 67778999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeEeechhhHHHHHhhcccCC---CceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHH
Q 010543 194 AGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVM 270 (507)
Q Consensus 194 aa~~agl~~~~li~Ep~Aaa~~~~~~~~~---~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~ 270 (507)
|++.||++++.+++||+|||++|+..... .+..++|||+||||+|++++++.++.+++++..++..+||++||+.|+
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 99999999999999999999999876542 578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHH
Q 010543 271 EYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVK 350 (507)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~ 350 (507)
+++.++++++++.+...+++.+.+|+.+||++|+.|+...+..+.++.+.++.++..+|+|++|+++++++++++.+.|.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~ 339 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVE 339 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999989999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcC
Q 010543 351 KAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 414 (507)
Q Consensus 351 ~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~ 414 (507)
++|++++....+++.|+|+||+|++|+|++.|++.|++.++..+.||+++||+|||++|+.+++
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999988899999999999999999999999998888889999999999999999998865
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2e-64 Score=514.05 Aligned_cols=378 Identities=70% Similarity=1.106 Sum_probs=361.9
Q ss_pred CCcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHH
Q 010543 35 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKE 114 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 114 (507)
+..+||||||||||++|++.+|.++++.++.|++++||+|+|.++++++|++|+.....+|.++++++|+++|+++++..
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 96 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRS 96 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 010543 115 VQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDA 194 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~a 194 (507)
++...+.+||.++..+|.+.+.+.+ ++..+.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 97 VQKDIKHLPFNVVNKDGKPAVEVSV-KGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHTTCSSEEEEETTEEEEEEES-SSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEcCCCceEEEEEe-CCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999889999999887 677789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHH
Q 010543 195 GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFI 274 (507)
Q Consensus 195 a~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~ 274 (507)
++.||++++.+++||+|||++|++.....+..++|||+||||+|++++++.++.+++++..++..+||++||+.|.+++.
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999998877667889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHHHHHH
Q 010543 275 KLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAME 354 (507)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~ 354 (507)
++++++++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.++.++...++|++|+++++++++++.+.|.++|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~ 335 (394)
T 3qfu_A 256 KAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQ 335 (394)
T ss_dssp HHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhc
Q 010543 355 DAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 413 (507)
Q Consensus 355 ~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~ 413 (507)
+++....+++.|+|+||+|++|+|++.|++.|++.++..+.||+++||.|||++|+.++
T Consensus 336 ~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 336 DSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99998889999999999999999999999999888898999999999999999998763
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=3.6e-63 Score=506.70 Aligned_cols=380 Identities=30% Similarity=0.508 Sum_probs=342.7
Q ss_pred cCCcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCH
Q 010543 34 KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDK 113 (507)
Q Consensus 34 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 113 (507)
..+.+||||||||||++|++.+|.++++.++.|++++||+|+|.++.+++|.+|......+|.+++.++|+++|+.+++.
T Consensus 11 m~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~ 90 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSV 90 (409)
T ss_dssp --CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGC
T ss_pred CCCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccch
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999987765
Q ss_pred HHHhhcccCCeEEeccCCceeEEEEEeC---CceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHH
Q 010543 114 EVQRDMKLAPYKIVNRDGKPYIQVQIRD---GETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQA 190 (507)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~ 190 (507)
..... .+++.+...+|...+.+.... +..+.++++++++++|+++++.++.+++.++.++|||||++|++.||++
T Consensus 91 ~~~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 91 DPTHN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CCGGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 44332 344445566777777665421 3567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCceeEeechhhHHHHHhhccc--CCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHH
Q 010543 191 TKDAGIIAGLNVARIINEPTAAAIAYGLDK--KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQR 268 (507)
Q Consensus 191 l~~aa~~agl~~~~li~Ep~Aaa~~~~~~~--~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~ 268 (507)
+++|++.||++++.+++||+|||++|+... ...+..++|||+||||+|++++++.++.+++++..++..+||++||+.
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 248 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKV 248 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHH
Confidence 999999999999999999999999998764 246889999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhhcC--CCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHH
Q 010543 269 VMEYFIKLIKKKHG--KDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTM 346 (507)
Q Consensus 269 l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~ 346 (507)
|++++.+++..+++ .+...+++.+.+|+.+||++|+.|+...+..+.++.+.++.++..+|+|++|+++++|+++++.
T Consensus 249 i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 328 (409)
T 4gni_A 249 LIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFN 328 (409)
T ss_dssp HHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHH
Confidence 99999999999888 7788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCC-CC------CCCCCcchhhhhhHHHhhhhhcCC
Q 010543 347 GPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGK-EP------NKGVNPDEAVAYGAAVQGGILSGE 415 (507)
Q Consensus 347 ~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~-~v------~~~~~p~~ava~GAa~~a~~~~~~ 415 (507)
++|+++|+++++...+++.|+|+||+|++|+|++.|++.|+.. ++ ....||+++||+|||++++.....
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999889999999999999999999999999543 23 577899999999999999876543
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=3.4e-61 Score=488.10 Aligned_cols=371 Identities=54% Similarity=0.906 Sum_probs=337.4
Q ss_pred cEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecC-CcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHHH
Q 010543 37 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEV 115 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 115 (507)
.+||||||||||++|++.+|.++++.+++|++++||+|+|.+ +++++|++|+.....+|+++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 589999999999999999999999999999999999999965 5789999999999999999999999999999998888
Q ss_pred HhhcccCCeEEe-ccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 010543 116 QRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDA 194 (507)
Q Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~a 194 (507)
+...+.+|+.++ ..+|...+.+ +| +.++|+++++++|+++++.++.+++.++.++|+|||++|++.||+++++|
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~---~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV---KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE---TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE---CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 888888999887 6667665554 33 47899999999999999999999988889999999999999999999999
Q ss_pred HHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEe----CCeEEEEEEcCCCCCchHHHHHHHH
Q 010543 195 GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVM 270 (507)
Q Consensus 195 a~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~----~~~~~v~~~~~~~~~GG~~id~~l~ 270 (507)
++.||++.+.+++||+|||++|+......+..++|||+||||+|+++++.. ++.+++++..++..+||++||+.|+
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~ 237 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 999999999999999999999987654467899999999999999999998 5778888888888999999999999
Q ss_pred HHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccC---C-cceEEeecHHHHHHHHHHHHHHHH
Q 010543 271 EYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFD---G-IDFSEPLTRARFEELNNDLFRKTM 346 (507)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~i~ 346 (507)
+++.++++++++.++..+++.+.+|+..||++|+.|+...+..+.++.+.+ | .++.++|+|++|+++++|+++++.
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~ 317 (383)
T 1dkg_D 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSI 317 (383)
T ss_dssp HHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHH
Confidence 999999999999888888999999999999999999998888888776543 2 456779999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhc
Q 010543 347 GPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 413 (507)
Q Consensus 347 ~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~ 413 (507)
+.+.++|+++++.+.+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+|||++|+.++
T Consensus 318 ~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 318 ELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999988889999999999999999999999999 57788889999999999999998653
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.1e-41 Score=339.83 Aligned_cols=309 Identities=27% Similarity=0.358 Sum_probs=234.8
Q ss_pred cEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCC--c-EEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCH
Q 010543 37 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS--E-RLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDK 113 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 113 (507)
.+|||||||+||++++..++ .++ .+||+|+|.++ + .++|++|+.....+|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------- 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------- 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-------------
Confidence 58999999999999875443 233 26999999865 3 47999998766555544321
Q ss_pred HHHhhcccCCeEEeccCCceeEEEEEeCCceeEe-CHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHH
Q 010543 114 EVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVF-SPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATK 192 (507)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~ 192 (507)
..|++ +|....+ .++++++.++++++.. ..++ ...+|+|||++|++.||++++
T Consensus 62 -------~~p~~---------------~g~i~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 -------IRPMR---------------DGVIADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------ECCEE---------------TTEESSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -------EecCC---------------CCeeCChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 01111 2211112 2444555555444331 1122 368999999999999999999
Q ss_pred HHHHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHH
Q 010543 193 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEY 272 (507)
Q Consensus 193 ~aa~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~ 272 (507)
+|++.||++.+.+++||+|||++|+.... .+..++|||+||||||+++++.... + ..++..+||++||+.|.++
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~~----~-~~~~~~lGG~~id~~l~~~ 189 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGSI----V-TWESIRIAGDEMDEAIVQY 189 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTEE----E-EEEEESCSHHHHHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCCE----E-eeCCCCccChhHHHHHHHH
Confidence 99999999999999999999999976543 5678999999999999999986432 1 2455789999999999999
Q ss_pred HHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCc--------EEEEEEeeccCCcceEEeecHHHHHHHHHHHHHH
Q 010543 273 FIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH--------QVRVEIESLFDGIDFSEPLTRARFEELNNDLFRK 344 (507)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~--------~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~ 344 (507)
+.+++ +.++. ...||++|+.++... ...+....+.++.+..++|+|++|+++++|.+++
T Consensus 190 l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 256 (344)
T 1jce_A 190 VRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVA 256 (344)
T ss_dssp HHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHH
Confidence 87654 32222 378999999998653 2333334455777788999999999999999999
Q ss_pred HHHHHHHHHHHcCCC--cCCC-CeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhc
Q 010543 345 TMGPVKKAMEDAGLE--KNQI-DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 413 (507)
Q Consensus 345 i~~~i~~~l~~~~~~--~~~i-~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~ 413 (507)
+.+.|.++|++++.. .+.+ +.|+|+||+|++|++++.|++.| +.++....||+++||+||++++..++
T Consensus 257 i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 257 IVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999986432 1224 68999999999999999999999 56777788999999999999997543
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=1e-28 Score=249.10 Aligned_cols=321 Identities=18% Similarity=0.193 Sum_probs=208.5
Q ss_pred CCcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCCcEEEcHhHHhhhhhCCChhHHHhHHhcCCCCCCHH
Q 010543 35 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKE 114 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 114 (507)
+..++|||+||++++++..+++.+++. ..|...+|+. ..+.....+++.+...+|+++++.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~------------~~~~g~i~d~~~~~~~ik~~~~~~----- 72 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPG------------LLMEGMVAEPAALAQEIKELLLEA----- 72 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTT------------SEETTEESCHHHHHHHHHHHHHHH-----
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCC------------cccCCCcCCHHHHHHHHHHHHHHc-----
Confidence 447899999999999999876665442 2244445652 123444567888899999998641
Q ss_pred HHhhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCH---------
Q 010543 115 VQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFND--------- 185 (507)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~--------- 185 (507)
..+. ..-.+.-.+...+...+ ....++++++... +...++++++.++.++++++|..=..
T Consensus 73 ---~~~~-~~v~~~i~~~~~~~~~~---~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~ 141 (377)
T 2ych_A 73 ---RTRK-RYVVTALSNLAVILRPI---QVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQV 141 (377)
T ss_dssp ---TCCC-CEEEEEECGGGCEEEEE---EEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEE
T ss_pred ---CCCc-ceEEEEecCCcEEEEEE---ECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCccee
Confidence 1111 11111222322222222 1245677776543 34467778888889999998731111
Q ss_pred ---------HHHHHHHHHHHHcCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEc
Q 010543 186 ---------AQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTN 255 (507)
Q Consensus 186 ---------~qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~ 255 (507)
...+.+++|++.||+++..++.||.||+.+|+.... .+...++|+|+||||||+++++ .+... ..
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~--~g~~~---~~ 216 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR--GDKPL---AV 216 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE--TTEEE---EE
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE--CCEEE---EE
Confidence 124889999999999999999999999999865332 2456789999999999999997 34322 24
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHH
Q 010543 256 GDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFE 335 (507)
Q Consensus 256 ~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e 335 (507)
++..+||++||+.|++. ++.+ ...||++|+.++.........+...+-.+....+++++++
T Consensus 217 ~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~ 277 (377)
T 2ych_A 217 RVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIY 277 (377)
T ss_dssp EEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------CHH
T ss_pred EeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHH
Confidence 55789999999999874 2322 3689999999875432211100001111234578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHc--CCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCC-------------------
Q 010543 336 ELNNDLFRKTMGPVKKAMEDA--GLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKG------------------- 394 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~------------------- 394 (507)
+++++.++++.+.|++.|+.. +.....++.|+|+||++++|++++.+++.| +.++...
T Consensus 278 ~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~~P~~~v~~~~~~~~~~~l~ 356 (377)
T 2ych_A 278 DAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPVNPWEAVAVDPKRFESEQLQ 356 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEECCGGGGSBCCTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEecCchhhcccCcccCCHHHHH
Confidence 999999999999999999853 455667999999999999999999999999 4433221
Q ss_pred -CCcchhhhhhHHHhhh
Q 010543 395 -VNPDEAVAYGAAVQGG 410 (507)
Q Consensus 395 -~~p~~ava~GAa~~a~ 410 (507)
.+|..++|.|+|+++.
T Consensus 357 ~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 357 EIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHcCC
Confidence 2455678888888764
No 12
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=6.1e-29 Score=246.60 Aligned_cols=225 Identities=17% Similarity=0.164 Sum_probs=163.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeEeechhhH
Q 010543 148 SPEEISAMILTKMKETAEAFLGKKIKDAV--VTVPAYFNDAQRQATKDAGIIA--------G------LNVARIINEPTA 211 (507)
Q Consensus 148 ~~~~l~~~~L~~l~~~~~~~~~~~~~~~v--iTVP~~~~~~qr~~l~~aa~~a--------g------l~~~~li~Ep~A 211 (507)
.+++...+++..|++.++.....+ .++| ++||++++..||+++++++..+ | +..+.+++||.|
T Consensus 96 ~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~A 174 (346)
T 2fsj_A 96 ASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVG 174 (346)
T ss_dssp TSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHH
T ss_pred cChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHH
Confidence 345555666666665442222223 5699 9999999999999999997765 4 355789999999
Q ss_pred HHHHhhccc---CCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCC--CCc
Q 010543 212 AAIAYGLDK---KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGK--DIS 286 (507)
Q Consensus 212 aa~~~~~~~---~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~--~~~ 286 (507)
||++| +.. .++..+++|+|+||||||+++++..++. .+....++..+||+++++.|.+++ +++++. .+.
T Consensus 175 Aa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i----~~~~g~~~~i~ 248 (346)
T 2fsj_A 175 AALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKI----AKETGFVVPFD 248 (346)
T ss_dssp HHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHH----HHHHCCCCCHH
T ss_pred HHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHH----HHHhCCCcCCC
Confidence 99988 322 1234778999999999999999987766 444445677899999999998874 455555 322
Q ss_pred cCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCe
Q 010543 287 KDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARF-EELNNDLFRKTMGPVKKAMEDAGLEKNQIDE 365 (507)
Q Consensus 287 ~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 365 (507)
. ..+| .... +.+ .+. .++++++ +++++++++++.+.+++.|+++ .++++.
T Consensus 249 ~---------~~~e-------~~~~--~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~ 299 (346)
T 2fsj_A 249 L---------AQEA-------LSHP--VMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTS 299 (346)
T ss_dssp H---------HHHH-------TTSC--EEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEE
T ss_pred H---------HHHh-------cCCe--EeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccE
Confidence 1 1222 1111 221 232 2558999 9999999999999999999875 456799
Q ss_pred EEEEcCCCCCHHHHHHHHhhcCCCCC-CCCCCcchhhhhhHHHhhh
Q 010543 366 IVLVGGSTRIPKVQQLLKDYFDGKEP-NKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 366 V~lvGG~s~~p~l~~~l~~~~~~~~v-~~~~~p~~ava~GAa~~a~ 410 (507)
|+|+||+|++ +++.+++.|+...+ ....||++|+|+|+..++.
T Consensus 300 IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 300 LIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 9999999998 99999999963322 2267999999999998764
No 13
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=1.5e-26 Score=222.59 Aligned_cols=204 Identities=23% Similarity=0.346 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEeechhhHHHHHhhcccCCCceeEE
Q 010543 149 PEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 228 (507)
Q Consensus 149 ~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~~~~~qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~l 228 (507)
..+.....++++++.++...+.....+++|+|+.|...+|+.++++++.+|++...++.||+|++++++.. ..+
T Consensus 69 d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~ 142 (272)
T 3h1q_A 69 DYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGI 142 (272)
T ss_dssp THHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEE
T ss_pred cHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEE
Confidence 34566788888888888887777889999999999999999999999999999999999999999988653 259
Q ss_pred EEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc
Q 010543 229 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSS 308 (507)
Q Consensus 229 v~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~ 308 (507)
|+|+||||+|+++++ ++... ......+||.++|+.+.+++. .+ ...+|++|+.++
T Consensus 143 viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~~- 197 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDFS- 197 (272)
T ss_dssp EEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSST-
T ss_pred EEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhcC-
Confidence 999999999999987 44322 346689999999999998852 11 268899998765
Q ss_pred CcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCC
Q 010543 309 QHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDG 388 (507)
Q Consensus 309 ~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~ 388 (507)
+++++++++++.++++.+.+.+.+++.+ +++.|+|+||++++|++++.+++.| +
T Consensus 198 ---------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~ 251 (272)
T 3h1q_A 198 ---------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-G 251 (272)
T ss_dssp ---------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-S
T ss_pred ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-C
Confidence 6889999999999999999999988753 3789999999999999999999999 6
Q ss_pred CCCCCCCCcchhhhhhHHHhh
Q 010543 389 KEPNKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 389 ~~v~~~~~p~~ava~GAa~~a 409 (507)
.++..+.+|++++|+|||++|
T Consensus 252 ~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 252 KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SCCBCCSSGGGHHHHHHHTTC
T ss_pred CCccccCChHHHHHHHHHhcC
Confidence 788888999999999999874
No 14
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=1.6e-26 Score=236.03 Aligned_cols=225 Identities=17% Similarity=0.123 Sum_probs=164.7
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeechhhHHHHH-hh---cccCCCceeEEEEEcCCcceEEEEEEEeC
Q 010543 172 IKDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIA-YG---LDKKGGEKNILVFDLGGGTFDVSILTIDN 246 (507)
Q Consensus 172 ~~~~viTVP~~~~~~qr~~l~~aa-~~agl~~~~li~Ep~Aaa~~-~~---~~~~~~~~~~lv~D~Gggt~dvsv~~~~~ 246 (507)
...+++|+|+.|+..+|+++.+++ +.+|++.+.+++||.||+++ |. +... .. +.+|+|+|+||||++++. +
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~-~~-~glVvDiG~gtt~v~~v~--~ 182 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER-TL-TGTVIDSGDGVTHVIPVA--E 182 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC-CC-CEEEEEESSSCEEEEEEE--T
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC-CC-eEEEEEcCCCceEEEEeE--C
Confidence 457999999999999999999998 88999999999999999987 42 1111 22 679999999999999986 4
Q ss_pred CeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCc----------------
Q 010543 247 GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH---------------- 310 (507)
Q Consensus 247 ~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~---------------- 310 (507)
+. .+....++..+||+++|+.|.+++.++. +...... -...+|++|+.++...
T Consensus 183 G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~ 251 (418)
T 1k8k_A 183 GY-VIGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSK 251 (418)
T ss_dssp TE-ECGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGG
T ss_pred CE-EcccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccc
Confidence 43 2222235568999999999999976432 1111111 1256777777765321
Q ss_pred -EEEEEEeeccCCcceEEeecHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCcCCCCeEEEEcCCCCCHHH
Q 010543 311 -QVRVEIESLFDGIDFSEPLTRARF---EELNNDLF------RKTMGPVKKAMEDAG--LEKNQIDEIVLVGGSTRIPKV 378 (507)
Q Consensus 311 -~~~~~i~~~~~~~~~~~~itr~~~---e~~~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~V~lvGG~s~~p~l 378 (507)
...+.+++...+.+..+++++++| |.+++|.+ ..+.+.|.+.|.++. +....++.|+|+||+|++|++
T Consensus 252 ~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~ 331 (418)
T 1k8k_A 252 WIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDF 331 (418)
T ss_dssp TCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTH
T ss_pred cceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccH
Confidence 245666665556677889999999 55655542 568888999998864 334456789999999999999
Q ss_pred HHHHHhhcCC-----------------------CCCCCCCCcchhhhhhHHHhhhh
Q 010543 379 QQLLKDYFDG-----------------------KEPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 379 ~~~l~~~~~~-----------------------~~v~~~~~p~~ava~GAa~~a~~ 411 (507)
+++|++.+.. .++..+.+|..++.+||+++|..
T Consensus 332 ~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 332 GRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 9998875421 12334557889999999999863
No 15
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=6.8e-27 Score=236.83 Aligned_cols=199 Identities=16% Similarity=0.124 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHH
Q 010543 186 AQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDF 265 (507)
Q Consensus 186 ~qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~i 265 (507)
...+.+.+|++.||+++..++.||.|||+++... ..+...++++|+||||||+++++ ++.+.. .++.++||++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~-~~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~i 241 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTT-PEKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHV 241 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCH-HHHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcc-ccccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHH
Confidence 4567889999999999999999999999988432 22456799999999999999998 554432 34578999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccC-----cEEEEEEeeccCCcceEEeecHHHHHHHHHH
Q 010543 266 DQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ-----HQVRVEIESLFDGIDFSEPLTRARFEELNND 340 (507)
Q Consensus 266 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~-----~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~ 340 (507)
|+.|++.+. . ....||++|+.++.. .+..+.++... .....++++++++++++|
T Consensus 242 t~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ii~p 300 (419)
T 4a2a_A 242 IKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVIIHA 300 (419)
T ss_dssp HHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHHHHH
Confidence 999987631 1 128899999998742 34456666543 245678999999999999
Q ss_pred HHHHHHHHHHHHHHHcCC------CcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCC--C---------------CCCc
Q 010543 341 LFRKTMGPVKKAMEDAGL------EKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPN--K---------------GVNP 397 (507)
Q Consensus 341 ~~~~i~~~i~~~l~~~~~------~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~--~---------------~~~p 397 (507)
.++++.+.+++.|+.++. ....++.|+|+||+|++|++++.+++.| +.++. . ..+|
T Consensus 301 ~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~P 379 (419)
T 4a2a_A 301 RLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVANDP 379 (419)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTCG
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCCc
Confidence 999999999999999987 3456889999999999999999999999 45432 2 1489
Q ss_pred chhhhhhHHHhhhhh
Q 010543 398 DEAVAYGAAVQGGIL 412 (507)
Q Consensus 398 ~~ava~GAa~~a~~~ 412 (507)
.++.+.|.++++...
T Consensus 380 ~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 380 SFAAAFGNVFAVSEN 394 (419)
T ss_dssp GGHHHHHTTCC----
T ss_pred hHHHHHHHHHHHhhc
Confidence 999999999988643
No 16
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.93 E-value=7.8e-26 Score=227.39 Aligned_cols=298 Identities=15% Similarity=0.143 Sum_probs=194.7
Q ss_pred CcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecC----------CcEEEcHhHHhhhhhCCChhHHHhHHh
Q 010543 36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD----------SERLIGEAAKNQAAVNPDRTIFDVKRL 105 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~----------~~~~~G~~A~~~~~~~~~~~~~~~k~l 105 (507)
...|+||+||+++++++..++.|..+ +||++.... ...++|++|.... .. ..+
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~--- 67 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL--- 67 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE---
T ss_pred CceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----cc--cce---
Confidence 46799999999999999866554322 355555432 3467888876431 00 000
Q ss_pred cCCCCCCHHHHhhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCC--CcCcEEEEeCCCC
Q 010543 106 IGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGK--KIKDAVVTVPAYF 183 (507)
Q Consensus 106 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~--~~~~~viTVP~~~ 183 (507)
..|. .+|.. ..-+....+++++.. +.++. ....+++|+|+.+
T Consensus 68 ---------------~~Pi---------------~~G~i---~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~ 111 (375)
T 2fxu_A 68 ---------------KYPI---------------EHGII---TNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLN 111 (375)
T ss_dssp ---------------ECSE---------------ETTEE---CCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTC
T ss_pred ---------------eccc---------------cCCcc---cCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCC
Confidence 0111 13322 222334455555542 22332 2356999999999
Q ss_pred CHHHHHHHHHH-HHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCch
Q 010543 184 NDAQRQATKDA-GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGG 262 (507)
Q Consensus 184 ~~~qr~~l~~a-a~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG 262 (507)
+..+|+++.++ .+.+|++.+.+++||.||+++++. ...+|+|+|+||||++.+. ++. .+....+...+||
T Consensus 112 ~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~~GG 182 (375)
T 2fxu_A 112 PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLDLAG 182 (375)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEEE--TTE-ECGGGCEEESCCH
T ss_pred cHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEeE--CCE-EeccceEEeccCH
Confidence 99999988875 577899999999999999999874 3679999999999988775 553 2222234568999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhc----------------cCcEEEEEEeeccCCcceE
Q 010543 263 EDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALS----------------SQHQVRVEIESLFDGIDFS 326 (507)
Q Consensus 263 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls----------------~~~~~~~~i~~~~~~~~~~ 326 (507)
+++|+.|.+++.++ .+......+. ..+|++|+.+. ......+.++ ++ ..
T Consensus 183 ~~lt~~l~~~l~~~---~~~~~~~~~~-------~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~ 247 (375)
T 2fxu_A 183 RDLTDYLMKILTER---GYSFVTTAER-------EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QV 247 (375)
T ss_dssp HHHHHHHHHHHHHH---TCCCCSHHHH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CE
T ss_pred HHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CE
Confidence 99999999997654 1221111111 33444444432 2223333332 33 24
Q ss_pred EeecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CCcCCCCeEEEEcCCCCCHHHHHHHHhhcC----C---C
Q 010543 327 EPLTRARF---EELNNDL-----FRKTMGPVKKAMEDAG--LEKNQIDEIVLVGGSTRIPKVQQLLKDYFD----G---K 389 (507)
Q Consensus 327 ~~itr~~~---e~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~----~---~ 389 (507)
+++++++| |.+++|. ...+.+.|.+.|+++. +....++.|+|+||+|++|+++++|++.+. . .
T Consensus 248 i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v 327 (375)
T 2fxu_A 248 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKI 327 (375)
T ss_dssp EEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCC
T ss_pred EEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeE
Confidence 67788877 4455553 3567778888887653 223346789999999999999999998773 1 3
Q ss_pred CCCCCCCcchhhhhhHHHhhh
Q 010543 390 EPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 390 ~v~~~~~p~~ava~GAa~~a~ 410 (507)
++....+|.+++++||++++.
T Consensus 328 ~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 328 KIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp CEECCTTTTSHHHHHHHHHHH
T ss_pred EEEcCCCCCccEEcchHHhhC
Confidence 445677999999999999997
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.89 E-value=4.2e-23 Score=202.97 Aligned_cols=227 Identities=17% Similarity=0.186 Sum_probs=147.5
Q ss_pred EeCHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeEeech
Q 010543 146 VFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAY-FNDA--QR--QATKDA------------GIIAGLNVARIINE 208 (507)
Q Consensus 146 ~~~~~~l~~~~L~~l~~~~~~~~~~~~~~~viTVP~~-~~~~--qr--~~l~~a------------a~~agl~~~~li~E 208 (507)
.+++..+++.+ +.+++ +.. .+.+ ..+++++|.. |... |+ +.+.+- .+.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 56777776654 44432 211 1222 3689999987 6531 22 222221 22345567888999
Q ss_pred hhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccC
Q 010543 209 PTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKD 288 (507)
Q Consensus 209 p~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~ 288 (507)
|.||++++.. ...++..++|+|+||||+|+++++ ++...+....++..+||.++|+.|.+++.+ + +.+++.
T Consensus 149 ~~aa~~~~~~-~~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~-~~~i~~- 219 (320)
T 2zgy_A 149 SIPAGYEVLQ-ELDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A-RTKGSS- 219 (320)
T ss_dssp SHHHHHHHHH-HSCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-SBGGGH-
T ss_pred cHHHHHhhhc-cccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-CCCCCH-
Confidence 9999998853 333567899999999999999998 444445555677899999999999998643 2 322221
Q ss_pred HHHHHHHHHHHHHH-HHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEE
Q 010543 289 KRAIGKLRREAERA-KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 367 (507)
Q Consensus 289 ~~~~~~L~~~~e~~-K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~ 367 (507)
..+|++ |..- . . .+........-..+++.+++++.++++.+.|.+.+++. .+++.|+
T Consensus 220 --------~~ae~~lk~~~-~--------~-~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vv 277 (320)
T 2zgy_A 220 --------YLADDIIIHRK-D--------N-NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVM 277 (320)
T ss_dssp --------HHHHHHHHTTT-C--------H-HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEE
T ss_pred --------HHHHHHHHHhh-h--------h-hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEE
Confidence 234444 3320 0 0 00000000111345666777777777777777776552 4689999
Q ss_pred EEcCCCCCHHHHHHHHhhcCCC--CCCCCCCcchhhhhhHHHhh
Q 010543 368 LVGGSTRIPKVQQLLKDYFDGK--EPNKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 368 lvGG~s~~p~l~~~l~~~~~~~--~v~~~~~p~~ava~GAa~~a 409 (507)
|+||+|++ +++.|++.|+.. ++....||++|+|+||++++
T Consensus 278 l~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 278 VIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred EECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999987 999999999532 46778899999999999875
No 18
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.82 E-value=2.2e-21 Score=195.88 Aligned_cols=214 Identities=18% Similarity=0.151 Sum_probs=89.6
Q ss_pred CcEEEEeCCCCCHHHHHHHHHH-HHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEE
Q 010543 173 KDAVVTVPAYFNDAQRQATKDA-GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEV 251 (507)
Q Consensus 173 ~~~viTVP~~~~~~qr~~l~~a-a~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v 251 (507)
..+++|+|+.++..+|+++.++ .+.+|++.+.++.||.||+++++. ...+|+|+|+|||+++.+. ++.. +
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------~~~lVVDiG~g~T~v~pv~--~G~~-~ 175 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------LTGVVVDSGDGVTHICPVY--EGFS-L 175 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-C
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------ceEEEEEcCCCceEeeeeE--CCEE-c
Confidence 4699999999999999988885 577899999999999999998864 3559999999999998775 4432 1
Q ss_pred EEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccC----------------cEEEEE
Q 010543 252 LSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ----------------HQVRVE 315 (507)
Q Consensus 252 ~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~----------------~~~~~~ 315 (507)
........+||+++|+.|.+++.++ .+......+. ..+|++|+.+... ....+.
T Consensus 176 ~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~ 245 (394)
T 1k8k_B 176 PHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYT 245 (394)
T ss_dssp STTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred ccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceEEE
Confidence 1112235899999999999997643 1222111122 3455555554321 112222
Q ss_pred EeeccCCcceEEeecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCCCCHHHHHHHHhh
Q 010543 316 IESLFDGIDFSEPLTRARF---EELNNDL-----FRKTMGPVKKAMEDAGLE--KNQIDEIVLVGGSTRIPKVQQLLKDY 385 (507)
Q Consensus 316 i~~~~~~~~~~~~itr~~~---e~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~V~lvGG~s~~p~l~~~l~~~ 385 (507)
+.++. .++|+.++| |.+++|. ...+.+.|.+.|.++... ....+.|+|+||+|.+|++.++|++.
T Consensus 246 ---lpdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 246 ---LPDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp ---CTTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred ---CCCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 22333 456677766 3344442 245778888888886432 33457899999999999999999886
Q ss_pred cCC------------------CCCCCCCCcchhhhhhHHHhhh
Q 010543 386 FDG------------------KEPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 386 ~~~------------------~~v~~~~~p~~ava~GAa~~a~ 410 (507)
+.. .++..+.+|..++.+|++++|.
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 621 1233356778999999999886
No 19
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.77 E-value=7.9e-18 Score=161.80 Aligned_cols=179 Identities=17% Similarity=0.146 Sum_probs=122.1
Q ss_pred cCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHH
Q 010543 198 AGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLI 277 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~ 277 (507)
++......++|++|+++++.+... ....++|+|||++++.++. .++.++.....++...|+.++++.+++++.-.+
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~---~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~ 144 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP---ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDV 144 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST---TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCG
T ss_pred HhhCCCcccchHHHHHHHHHHhCC---CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccCh
Confidence 555677899999999988765443 3347899999999999885 467778888888889999999999988864222
Q ss_pred Hh------hcC--CCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHH
Q 010543 278 KK------KHG--KDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPV 349 (507)
Q Consensus 278 ~~------~~~--~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i 349 (507)
.. +.. .++......+. .. ..+..+ -.....++++..+.+.+.+.+
T Consensus 145 ~~~~~~~~~a~~~~~i~~~~~~f~--~s---~~~~~~----------------------~~~~~~~di~a~~~~~v~~~l 197 (276)
T 4ehu_A 145 SELGSISMNSQNEVSISSTCTVFA--ES---EVISHL----------------------SENAKIEDIVAGIHTSVAKRV 197 (276)
T ss_dssp GGHHHHHTTCSSCCCCCCCSHHHH--HH---HHHHHH----------------------HTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhcCCCCCCcCCccchhh--hh---HHHHhh----------------------hccccHHHHHHHHHHHHHHHH
Confidence 11 000 00000000000 00 000000 011123566666666666666
Q ss_pred HHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhh
Q 010543 350 KKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 412 (507)
Q Consensus 350 ~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~ 412 (507)
.....+. ..++.|+|+||.+++|.|++.+++.| +.++..+.+|++++|+|||++|...
T Consensus 198 ~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 198 SSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHH
Confidence 5554443 34678999999999999999999999 7889999999999999999999654
No 20
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.76 E-value=1.6e-18 Score=171.68 Aligned_cols=203 Identities=17% Similarity=0.216 Sum_probs=133.5
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeEeechhhHHHHHhhcccCC-----CceeEEEEEcCC
Q 010543 173 KDAVVTVPAYFNDAQR-QATKDAGIIAGL------------NVARIINEPTAAAIAYGLDKKG-----GEKNILVFDLGG 234 (507)
Q Consensus 173 ~~~viTVP~~~~~~qr-~~l~~aa~~agl------------~~~~li~Ep~Aaa~~~~~~~~~-----~~~~~lv~D~Gg 234 (507)
..+++.+|..+...+| +++++++...+- ..+.+++||.||++++.+.... ....++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3689999999887776 589888875532 4577899999999998764421 367899999999
Q ss_pred cceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEE
Q 010543 235 GTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRV 314 (507)
Q Consensus 235 gt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~ 314 (507)
||||++++. ++.+. ....+....||..+++.+.+++.+++. +.++.. ...++.+. +
T Consensus 194 gTtd~~v~~--~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~~---------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTYQ--NMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASITP---------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------CH---------HHHHSCCC----------
T ss_pred CcEEEEEEc--CCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCCH---------HHHhcCCc---------c
Confidence 999999993 44421 111233579999999999999765431 222221 11111110 0
Q ss_pred EEeeccCCcc--eEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHH--HHHHHHhhcCCCC
Q 010543 315 EIESLFDGID--FSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPK--VQQLLKDYFDGKE 390 (507)
Q Consensus 315 ~i~~~~~~~~--~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~--l~~~l~~~~~~~~ 390 (507)
. ..+.+ -...+ .+.+++.++++++++.+.|++.+.+ ++.++.|+|+||++.++. |.+.+++.||..
T Consensus 250 ~----~~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 250 K----QCKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred c----cccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 0 00000 00111 2335556666666666666666543 466899999999999988 889999998532
Q ss_pred CCCCCCcchhhhhhHHHhhhhhc
Q 010543 391 PNKGVNPDEAVAYGAAVQGGILS 413 (507)
Q Consensus 391 v~~~~~p~~ava~GAa~~a~~~~ 413 (507)
.||.+|+|+|+..++..+.
T Consensus 320 ----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHH
Confidence 7999999999999987664
No 21
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.70 E-value=3.2e-18 Score=168.18 Aligned_cols=202 Identities=17% Similarity=0.216 Sum_probs=138.8
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcc
Q 010543 173 KDAVVTVPAYFND--AQRQATKDAGIIA--------G------LNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGT 236 (507)
Q Consensus 173 ~~~viTVP~~~~~--~qr~~l~~aa~~a--------g------l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt 236 (507)
..+++++|..+.. .+|+.+++..+.- | +..+.+++||.+|.+.+. ...+...++|+|+||||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~~~~~~v~vvDiGggT 183 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--ENFKNKNVAVIDFGGLN 183 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CCCTTCEEEEEEECSSC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hhhccCCEEEEEeCCCc
Confidence 4688999987664 4677887766521 1 134667899988887652 22367889999999999
Q ss_pred eEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHh-hcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEE
Q 010543 237 FDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKK-KHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVE 315 (507)
Q Consensus 237 ~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~-~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~ 315 (507)
||+++++ ++.+ +....+...+||..+++.+.+++ ++ +++..+.. ..+|++|+. .. .
T Consensus 184 td~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l----~~~~~g~~i~~---------~~~e~i~~~-g~---~--- 240 (329)
T 4apw_A 184 MGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDAL----TDLNNGNLITN---------EQAESALNN-GY---M--- 240 (329)
T ss_dssp EEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSS----SSCSSCSCTTS---------BTTTTCSSS-CS---S---
T ss_pred EEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHH----HhhccCCCCCH---------HHHHHHHhc-CC---c---
Confidence 9999998 4443 21123346799999999999884 44 56655443 233444332 10 0
Q ss_pred EeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCC
Q 010543 316 IESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGV 395 (507)
Q Consensus 316 i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~ 395 (507)
..+.+. ..+..+++++.++++++.+.+.+++. +.+++.++.|+|+||++.+ +.+.+++.|+ .++....
T Consensus 241 ----~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v~~ 308 (329)
T 4apw_A 241 ----KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSIITN 308 (329)
T ss_dssp ----CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEECCS
T ss_pred ----ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEecC
Confidence 001111 13456777777777777777776655 3455668999999999987 6799999994 4567788
Q ss_pred CcchhhhhhHHHhhhh
Q 010543 396 NPDEAVAYGAAVQGGI 411 (507)
Q Consensus 396 ~p~~ava~GAa~~a~~ 411 (507)
||.+|+|+|+..++..
T Consensus 309 ~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 309 NSQWTTCEGLYKVAVA 324 (329)
T ss_dssp SGGGHHHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHhh
Confidence 9999999999988754
No 22
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.67 E-value=1.5e-16 Score=136.55 Aligned_cols=83 Identities=63% Similarity=0.961 Sum_probs=78.7
Q ss_pred EEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcC
Q 010543 425 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVS 504 (507)
Q Consensus 425 ~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~ 504 (507)
+.|++|+++|+++.+|.|.+||++|+++|++++++|++..|+|+.+.|.||||++..+.+|.+||+|.|+|+||+|+|++
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 010543 505 AFN 507 (507)
Q Consensus 505 ~i~ 507 (507)
+|+
T Consensus 82 ~Ie 84 (151)
T 3dqg_A 82 QVE 84 (151)
T ss_dssp CEE
T ss_pred EEE
Confidence 874
No 23
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.67 E-value=1.5e-16 Score=136.60 Aligned_cols=83 Identities=65% Similarity=0.975 Sum_probs=78.7
Q ss_pred EEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcC
Q 010543 425 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVS 504 (507)
Q Consensus 425 ~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~ 504 (507)
+.|++|+|+|+++.+|.|.+||++|+++|++++++|++..|+|+.+.|.||||++..+.+|.+||+|.|+|+||+|+|++
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 010543 505 AFN 507 (507)
Q Consensus 505 ~i~ 507 (507)
+|+
T Consensus 82 ~Ie 84 (152)
T 3dob_A 82 QIE 84 (152)
T ss_dssp CEE
T ss_pred eEE
Confidence 874
No 24
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.66 E-value=1.8e-16 Score=136.36 Aligned_cols=83 Identities=65% Similarity=0.959 Sum_probs=79.3
Q ss_pred EEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcC
Q 010543 425 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVS 504 (507)
Q Consensus 425 ~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~ 504 (507)
+.|++|+|+|+++.+|.|.+||++|+++|++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|+|+||+|+|++
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 010543 505 AFN 507 (507)
Q Consensus 505 ~i~ 507 (507)
+|+
T Consensus 82 ~I~ 84 (152)
T 3h0x_A 82 QIE 84 (152)
T ss_dssp CEE
T ss_pred eEE
Confidence 874
No 25
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.64 E-value=3.6e-16 Score=138.07 Aligned_cols=88 Identities=59% Similarity=0.874 Sum_probs=78.9
Q ss_pred CcceEEEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCC
Q 010543 420 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 499 (507)
Q Consensus 420 ~~~~~~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~ 499 (507)
...+.+.|++|+++|+++.+|.+.+|||+|+++|++++++|++..|+|+.+.|.||||++..+.+|..||+|.|+|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCC
Q 010543 500 PRFVSAFN 507 (507)
Q Consensus 500 ~~g~~~i~ 507 (507)
|+|+++|+
T Consensus 97 p~G~~~Ie 104 (182)
T 3n8e_A 97 PRGVPQIE 104 (182)
T ss_dssp CTTCSCEE
T ss_pred CCCCeeEE
Confidence 99999874
No 26
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.64 E-value=3.8e-16 Score=142.79 Aligned_cols=84 Identities=58% Similarity=0.927 Sum_probs=80.6
Q ss_pred EEEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCc
Q 010543 424 LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFV 503 (507)
Q Consensus 424 ~~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~ 503 (507)
++.|++|+|+|+++.+|.|.+|||+|+++|++++.+|++..|+|+.+.|.||||++....+|..||+|.|+|+||+|+|+
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 010543 504 SAFN 507 (507)
Q Consensus 504 ~~i~ 507 (507)
++|+
T Consensus 82 ~~Ie 85 (219)
T 4e81_A 82 PQIE 85 (219)
T ss_dssp SCEE
T ss_pred ceEE
Confidence 9874
No 27
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.63 E-value=8e-17 Score=163.10 Aligned_cols=242 Identities=19% Similarity=0.117 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCC--CcCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeechhhHHHHHhhcccC--CCc
Q 010543 150 EEISAMILTKMKETAEAFLGK--KIKDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKK--GGE 224 (507)
Q Consensus 150 ~~l~~~~L~~l~~~~~~~~~~--~~~~~viTVP~~~~~~qr~~l~~aa-~~agl~~~~li~Ep~Aaa~~~~~~~~--~~~ 224 (507)
-+....+++++.. +.++. ....+++|.|...+...|+.+.+.+ +..|++.+.++.+|.+|+++.+.... ...
T Consensus 102 wd~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~ 178 (427)
T 3dwl_A 102 WDHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRS 178 (427)
T ss_dssp HHHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCC
T ss_pred HHHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCC
Confidence 4444555655543 22332 2347999999999999999998876 78999999999999999998874321 113
Q ss_pred eeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH
Q 010543 225 KNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKR 304 (507)
Q Consensus 225 ~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 304 (507)
.+-+|+|+|+|+|+++.+. ++.. +........+||+++|+.|.+++.++... ... ...++.+|+
T Consensus 179 ~tglVVDiG~g~T~v~PV~--~G~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe 242 (427)
T 3dwl_A 179 LTGTVVDSGDGVTHIIPVA--EGYV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKE 242 (427)
T ss_dssp CCEEEEEESSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHH
T ss_pred ceEEEEECCCCceEEEEEE--CCEE-ehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHH
Confidence 4579999999999999884 3321 11111224799999999999886543221 011 145566666
Q ss_pred HhccCcE-----------EEEEEe--ec--cCCcceEEeecHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC-
Q 010543 305 ALSSQHQ-----------VRVEIE--SL--FDGIDFSEPLTRARF---EELNNDL------FRKTMGPVKKAMEDAGLE- 359 (507)
Q Consensus 305 ~ls~~~~-----------~~~~i~--~~--~~~~~~~~~itr~~~---e~~~~~~------~~~i~~~i~~~l~~~~~~- 359 (507)
.++.... ....+. .+ .+|....+++..++| |-+++|- ...|.+.|.+.|.++...
T Consensus 243 ~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dl 322 (427)
T 3dwl_A 243 ECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDV 322 (427)
T ss_dssp HHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHH
T ss_pred hcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHH
Confidence 6542110 000011 11 234444667777776 4455552 245777888888765422
Q ss_pred -cCCCCeEEEEcCCCCCHHHHHHHHhhc----C---------------C--CCCCCCCCcchhhhhhHHHhhh
Q 010543 360 -KNQIDEIVLVGGSTRIPKVQQLLKDYF----D---------------G--KEPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 360 -~~~i~~V~lvGG~s~~p~l~~~l~~~~----~---------------~--~~v~~~~~p~~ava~GAa~~a~ 410 (507)
+.-.++|+|+||+|.+|++.++|.+.+ + . .++..+.++..++=.|++++|.
T Consensus 323 r~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 323 RKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 222457999999999999999888754 1 1 1233445677899999999885
No 28
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.63 E-value=1.6e-16 Score=133.88 Aligned_cols=88 Identities=52% Similarity=0.854 Sum_probs=78.7
Q ss_pred CcceEEEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCC
Q 010543 420 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 499 (507)
Q Consensus 420 ~~~~~~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~ 499 (507)
.+++.+.|++|+++|+++.++.|.+||+||+++|+++++.|++..|+|+.+.|.||||++..+.+|..||+|+|+|+||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCC
Q 010543 500 PRFVSAFN 507 (507)
Q Consensus 500 ~~g~~~i~ 507 (507)
|+|+++|+
T Consensus 94 p~G~~~Ie 101 (135)
T 1q5l_A 94 PRGMPQIE 101 (135)
T ss_dssp CSSSCCEE
T ss_pred CCceeEEE
Confidence 99998874
No 29
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.61 E-value=2.2e-15 Score=153.99 Aligned_cols=180 Identities=16% Similarity=0.158 Sum_probs=120.7
Q ss_pred CCcEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEecCC----cEEEcHhHHhhhhhCCChhHHHhHHhcCCCC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS----ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKF 110 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~ 110 (507)
....|+||+||.++++.+..++.|..+ +||+|+.... ..++|+++.... +
T Consensus 22 e~~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r--------------- 75 (498)
T 3qb0_A 22 EVSAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---R--------------- 75 (498)
T ss_dssp CBSCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---C---------------
T ss_pred CCCeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---c---------------
Confidence 335789999999999999876654333 4999987532 467787532110 0
Q ss_pred CCHHHHhhcccCCeEEeccCCceeEEEEEeCCceeEeCHHHHHHHHHHHHHHHHHHHhCC--CcC-cEEEEeCCCCCHHH
Q 010543 111 EDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGK--KIK-DAVVTVPAYFNDAQ 187 (507)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~L~~l~~~~~~~~~~--~~~-~~viTVP~~~~~~q 187 (507)
+...+.-.+.+| .+..-+....+++++... .++. ... .+++|.|...+...
T Consensus 76 --------------------~~l~l~~Pi~~G---vI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~ 129 (498)
T 3qb0_A 76 --------------------KDYELKPIIENG---LVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTEN 129 (498)
T ss_dssp --------------------TTEEEEESEETT---EESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHH
T ss_pred --------------------CceEEeccCcCC---EEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHH
Confidence 000011111234 233345555666666532 2322 223 69999999888999
Q ss_pred HHHHHHH-HHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHH
Q 010543 188 RQATKDA-GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFD 266 (507)
Q Consensus 188 r~~l~~a-a~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id 266 (507)
|+.+.++ ++..|++.+.++.+|.+|+++++.. +-+|+|+|+|+|+++.+. ++.. +........+||+++|
T Consensus 130 Re~~~eilFE~f~vpav~l~~~~vlalya~G~~------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt 200 (498)
T 3qb0_A 130 RKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFIN 200 (498)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHH
T ss_pred HHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHH
Confidence 9999886 4789999999999999999988752 249999999999999886 3421 1111112479999999
Q ss_pred HHHHHHHHH
Q 010543 267 QRVMEYFIK 275 (507)
Q Consensus 267 ~~l~~~l~~ 275 (507)
+.|.++|.+
T Consensus 201 ~~L~~lL~~ 209 (498)
T 3qb0_A 201 HLIKKALEP 209 (498)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHh
Confidence 999999753
No 30
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.60 E-value=2.5e-15 Score=130.11 Aligned_cols=83 Identities=66% Similarity=0.969 Sum_probs=78.9
Q ss_pred EEecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcC
Q 010543 425 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVS 504 (507)
Q Consensus 425 ~~~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~ 504 (507)
+.|++|+++|+++.++.|.+||++|++||++++..|++..|+|+.+.|.||||++..+.+|..||+|.|+|+||+|+|++
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 010543 505 AFN 507 (507)
Q Consensus 505 ~i~ 507 (507)
+|+
T Consensus 82 ~I~ 84 (152)
T 2op6_A 82 QIE 84 (152)
T ss_dssp CEE
T ss_pred eEE
Confidence 874
No 31
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.51 E-value=3.6e-14 Score=130.96 Aligned_cols=81 Identities=52% Similarity=0.899 Sum_probs=78.0
Q ss_pred ecccceeeEEEeCCEEEEEEeCCCCcCceeEEEEEeecCCceeEEEEEEecCCcCcccCcceeEEEEeCCCCCCCCcCCC
Q 010543 427 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRFVSAF 506 (507)
Q Consensus 427 ~~~~~~~gi~~~~~~~~~ii~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~ig~~~l~~~p~~~~g~~~i 506 (507)
|++|+++|+++.+|.+.+||++|+++|++++.+|++..|+|+.+.|.||||++.++.+|..||+|.|+|+||+|+|+++|
T Consensus 2 Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~I 81 (227)
T 1u00_A 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHI 81 (227)
T ss_dssp CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSCE
T ss_pred CcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred C
Q 010543 507 N 507 (507)
Q Consensus 507 ~ 507 (507)
+
T Consensus 82 ~ 82 (227)
T 1u00_A 82 R 82 (227)
T ss_dssp E
T ss_pred E
Confidence 4
No 32
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.41 E-value=9.1e-12 Score=132.62 Aligned_cols=117 Identities=16% Similarity=0.225 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHH-HHHhCCCc-----CcEEEEeCCCCCHHHHHHHHH-HHHHcCCceeEeechhhHHHHHhhcccC
Q 010543 149 PEEISAMILTKMKETA-EAFLGKKI-----KDAVVTVPAYFNDAQRQATKD-AGIIAGLNVARIINEPTAAAIAYGLDKK 221 (507)
Q Consensus 149 ~~~l~~~~L~~l~~~~-~~~~~~~~-----~~~viTVP~~~~~~qr~~l~~-aa~~agl~~~~li~Ep~Aaa~~~~~~~~ 221 (507)
..+...+ ++.|++++ .+.++... ..+++|.|..++...|+.|-+ +.+..|++.+.+..++.+|+++++..
T Consensus 170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 3444443 33454444 34555433 349999999999999999977 56678999999999999999998643
Q ss_pred CCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHH
Q 010543 222 GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIK 275 (507)
Q Consensus 222 ~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~ 275 (507)
+-+|+|+|.+.|+++-+. +|.. +........+||+++++.|.++|..
T Consensus 247 ----tglVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 247 ----STCIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp ----EEEEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred ----ceEEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 559999999999988776 3321 0001112479999999999988754
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.34 E-value=1e-12 Score=131.19 Aligned_cols=197 Identities=22% Similarity=0.220 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHc-CC--ceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCch
Q 010543 186 AQRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGG 262 (507)
Q Consensus 186 ~qr~~l~~aa~~a-gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG 262 (507)
.+-+.+.+|.+.+ |+ ++.. .||.||++++ +..++.+..++++|+||||||+++|.-....+ ......||
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaa-LTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~gG 439 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGA-LTTPGTTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGAG 439 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHH-TTSTTCCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECSH
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhh-cCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccch
Confidence 4567888888999 99 6666 9999999988 55555788899999999999999998554442 23357899
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccC----------cEEEEEE--eeccCC---c----
Q 010543 263 EDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ----------HQVRVEI--ESLFDG---I---- 323 (507)
Q Consensus 263 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~----------~~~~~~i--~~~~~~---~---- 323 (507)
+.++..++..|. .+ + +..||++|. .... +...+++ +.+... .
T Consensus 440 ~~VT~DIA~~Lg--------t~--d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~ 500 (610)
T 2d0o_A 440 DMVTMIIARELG--------LE--D--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVV 500 (610)
T ss_dssp HHHHHHHHHHHT--------CC--C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEE
T ss_pred HHHHHHHHHHhC--------CC--C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecc
Confidence 999999987742 11 0 177888888 5321 1112333 222110 0
Q ss_pred --ceEEeecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCC-
Q 010543 324 --DFSEPLTRAR--FEELNNDLFRKTMGP--VKKAMEDAGL-----EKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP- 391 (507)
Q Consensus 324 --~~~~~itr~~--~e~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v- 391 (507)
+.-..| +.+ +|+ ++-+-+++.+. +...|++.+. ...+|..|+|+||+|+++.+.+..++.|..-++
T Consensus 501 ~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VR 578 (610)
T 2d0o_A 501 KADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLV 578 (610)
T ss_dssp CSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCE
T ss_pred cccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeE
Confidence 111245 566 777 66666665554 2333555432 235679999999999999999999999943133
Q ss_pred ------CCCCCcchhhhhhHHHhhhh
Q 010543 392 ------NKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 392 ------~~~~~p~~ava~GAa~~a~~ 411 (507)
.....|..|+|.|.+++...
T Consensus 579 iGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 579 AGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp EEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred EecCCccccCCCcHHHHHHHHHHHhh
Confidence 22458999999999987643
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.31 E-value=1.7e-12 Score=130.10 Aligned_cols=194 Identities=21% Similarity=0.184 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHc-CC--ceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchH
Q 010543 187 QRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGE 263 (507)
Q Consensus 187 qr~~l~~aa~~a-gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~ 263 (507)
+-+.+.+|.+.+ |+ ++.. .||.||++++ +..++.+..++++|+||||||+++|.-....+ ......||+
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laa-LTedE~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~ 442 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGA-LTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGN 442 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHH-TTSTTCCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhh-cCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchH
Confidence 355677888888 99 5555 9999999988 55555788899999999999999998655443 333578999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCc----------EEEEEE--eeccCC---c-----
Q 010543 264 DFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH----------QVRVEI--ESLFDG---I----- 323 (507)
Q Consensus 264 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~----------~~~~~i--~~~~~~---~----- 323 (507)
.++..++..|- .+ + +..||++|. ..... ...+++ +.+... .
T Consensus 443 ~VT~DIA~~Lg--------~~--d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~ 503 (607)
T 1nbw_A 443 MVSLLIKTELG--------LE--D--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIK 503 (607)
T ss_dssp HHHHHHHHHHT--------CS--C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEE
T ss_pred HHHHHHHHHhC--------CC--C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccc
Confidence 99999987742 11 0 177888888 53211 112333 222110 0
Q ss_pred -ceEEeecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCC--
Q 010543 324 -DFSEPLTRAR--FEELNNDLFRKTMGP--VKKAMEDAGLE-----KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP-- 391 (507)
Q Consensus 324 -~~~~~itr~~--~e~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v-- 391 (507)
+.-..| +.+ +|+ ++-+-+++.+. +...|++.+.. ..+|..|+|+||+|+++.+.+..++.|..-++
T Consensus 504 ~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 504 EGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred ccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 111245 556 777 66666665554 45558776653 24568999999999999999999999943132
Q ss_pred -----CCCCCcchhhhhhHHHhh
Q 010543 392 -----NKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 392 -----~~~~~p~~ava~GAa~~a 409 (507)
.....|..|+|.|.+++.
T Consensus 582 GrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 582 GQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp EECCGGGTSCSCCHHHHHHHHHH
T ss_pred ecCCccccCCchHHHHHHHHHhh
Confidence 224589999999999865
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.00 E-value=2.3e-08 Score=94.96 Aligned_cols=171 Identities=17% Similarity=0.243 Sum_probs=98.3
Q ss_pred eEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcC
Q 010543 203 ARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 282 (507)
Q Consensus 203 ~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~ 282 (507)
..+++|.+|.+.+...... ... .++|+||+++.+..+ .++.+........+..|.-.+-+.+++. + +
T Consensus 77 ~~~v~Ei~ah~~ga~~~~~--~~~-~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~le~~a~~----l----g 143 (270)
T 1hux_A 77 DKQMSELSCHAMGASFIWP--NVH-TVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRFLDVMANI----L----E 143 (270)
T ss_dssp SEEECHHHHHHHHHHHHCT--TCC-EEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHHHHHHHHH----H----T
T ss_pred CCCcccHHHHHHHHHHhCC--CCC-EEEEECCCceEEEEE--eCCceeeeccccccchhhHHHHHHHHHH----h----C
Confidence 4679999998865422222 122 589999999887777 4665433333333344444343333333 2 3
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEEeecHHHH----------HHHHHHHHHHHHHHHHHH
Q 010543 283 KDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARF----------EELNNDLFRKTMGPVKKA 352 (507)
Q Consensus 283 ~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~----------e~~~~~~~~~i~~~i~~~ 352 (507)
.++.+ |-+.+.+.+. + + ..... ...+.+.++ +++++.+++.+...+.+.
T Consensus 144 ~~~~e-------l~~la~~~~~-----p---~----~~~~~--c~vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i~~~ 202 (270)
T 1hux_A 144 VKVSD-------LAELGAKSTK-----R---V----AISST--CTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIGL 202 (270)
T ss_dssp CCTTT-------HHHHHTTCCS-----C---C----CCCCC--SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHH-------HHHHHhhCCC-----C---C----Ccccc--cchhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33211 1111111100 0 0 00000 001122222 455555555555555555
Q ss_pred HHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhh
Q 010543 353 MEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 412 (507)
Q Consensus 353 l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~ 412 (507)
++..+. .+.|+++||.+++|.+++.+.+.+ +.++..+.+++.+.|.|||+.+...
T Consensus 203 ~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 203 ANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 543221 367999999999999999999999 7788888888889999999998764
No 36
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.09 E-value=1e-05 Score=83.75 Aligned_cols=121 Identities=17% Similarity=0.241 Sum_probs=86.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEE
Q 010543 173 KDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEV 251 (507)
Q Consensus 173 ~~~viTVP~~~~~~qr~~l~~aa-~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v 251 (507)
..+++|.|..++...|+.|.+++ +..|++.+.++.+|.+|+++++. ...-+|+|+|+|+|+++.+. .|.. +
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----~ttGLVVDiG~g~T~VvPV~--eG~v-l 293 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----STSTCVVNIGAAETRIACVD--EGTV-L 293 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----SSCEEEEEECSSCEEEEEEE--TTEE-C
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----CCceEEEcCCCceEEEEEEe--CCEE-E
Confidence 46999999999999999998866 56899999999999999998864 23569999999999999885 3421 1
Q ss_pred EEEcCCCCCchHHHHHHHHHHHHHHHHhhcC---CCCccCHHHHHHHHHHHHHHHHHhccC
Q 010543 252 LSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG---KDISKDKRAIGKLRREAERAKRALSSQ 309 (507)
Q Consensus 252 ~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~---~~~~~~~~~~~~L~~~~e~~K~~ls~~ 309 (507)
........+||+++|+.|.++|.++- +. ..+.. . .=...++.+|+.++-.
T Consensus 294 ~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~t-~----~e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 294 EHSAITLDYGGDDITRLFALFLLQSD---FPLQDWKIDS-K----HGWLLAERLKKNFTTF 346 (655)
T ss_dssp GGGCEEESCCHHHHHHHHHHHHHHTT---CSCCSCCTTS-H----HHHHHHHHHHHHHCCC
T ss_pred hhheeeecchHHHHHHHHHHHHHHcC---CCccccCCCC-c----chHHHHHHHHHheEEE
Confidence 11111257999999999999976431 21 11111 0 1125677788887544
No 37
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.61 E-value=0.00035 Score=65.96 Aligned_cols=47 Identities=23% Similarity=0.274 Sum_probs=41.2
Q ss_pred CCeEEEEcC-CCCCHHHHHHHHhhc--CCCCCCCCCCcchhhhhhHHHhh
Q 010543 363 IDEIVLVGG-STRIPKVQQLLKDYF--DGKEPNKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 363 i~~V~lvGG-~s~~p~l~~~l~~~~--~~~~v~~~~~p~~ava~GAa~~a 409 (507)
++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|+.+.|.|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 557999999 899999999999974 36678888999999999999875
No 38
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.30 E-value=0.0033 Score=60.46 Aligned_cols=80 Identities=15% Similarity=0.087 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHcCCceeEeechhhHHHHHhhcccCC-CceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHH
Q 010543 186 AQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGED 264 (507)
Q Consensus 186 ~qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~~~~~~~-~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~ 264 (507)
+..+.+.++-+..|+++..+-.|.+|...+.+..... .....+|+|+|||+|.+++++ ++.+.. ..+.++|+..
T Consensus 98 N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~~G~v~ 172 (315)
T 1t6c_A 98 NAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLPIGIVN 172 (315)
T ss_dssp THHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEECCCHHH
T ss_pred CHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEeccHHH
Confidence 3445566666678998755555555544443332221 255789999999999999986 443321 2236899998
Q ss_pred HHHHHH
Q 010543 265 FDQRVM 270 (507)
Q Consensus 265 id~~l~ 270 (507)
+.+.+.
T Consensus 173 l~e~~~ 178 (315)
T 1t6c_A 173 LTETFF 178 (315)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 887763
No 39
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.25 E-value=0.0085 Score=57.62 Aligned_cols=78 Identities=17% Similarity=0.323 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHcCCceeEeechhhHHHHHh-hccc--CCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCch
Q 010543 186 AQRQATKDAGIIAGLNVARIINEPTAAAIAY-GLDK--KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGG 262 (507)
Q Consensus 186 ~qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~-~~~~--~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG 262 (507)
+..+.+.++-+..|+++ .+|+..+-|.+.| +... .......+|+|+|||+|.+++++ ++.+.. ....++|.
T Consensus 90 N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~ 163 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGG 163 (315)
T ss_dssp THHHHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCH
T ss_pred CHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechh
Confidence 33455566667789986 4555544444433 2221 11246789999999999999997 332221 22257888
Q ss_pred HHHHHHH
Q 010543 263 EDFDQRV 269 (507)
Q Consensus 263 ~~id~~l 269 (507)
-.+.+.+
T Consensus 164 vrl~e~f 170 (315)
T 3mdq_A 164 QRLIDRF 170 (315)
T ss_dssp HHHHHHS
T ss_pred hHHHHHh
Confidence 8776654
No 40
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.20 E-value=0.004 Score=60.46 Aligned_cols=71 Identities=17% Similarity=0.054 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHcCCCcCCCCeEEEEcC-CCCCHHHHHHHHhhc-----CCCCCCCCCCcchhhhh
Q 010543 334 FEELNNDLFRKTMGPVKKAM----EDAGLEKNQIDEIVLVGG-STRIPKVQQLLKDYF-----DGKEPNKGVNPDEAVAY 403 (507)
Q Consensus 334 ~e~~~~~~~~~i~~~i~~~l----~~~~~~~~~i~~V~lvGG-~s~~p~l~~~l~~~~-----~~~~v~~~~~p~~ava~ 403 (507)
-|+++..++..+.+.|.... ++.+ ++.|+++|| .+..|++++.|.+.+ .+.++..+.+|+.+-|.
T Consensus 278 ~eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAl 352 (360)
T 2i7n_A 278 KEDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAV 352 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHH
Confidence 35666666666666655442 3333 456999999 899999999999986 24567778899999999
Q ss_pred hHHHhh
Q 010543 404 GAAVQG 409 (507)
Q Consensus 404 GAa~~a 409 (507)
|||+.+
T Consensus 353 GAaL~~ 358 (360)
T 2i7n_A 353 GALLEL 358 (360)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999975
No 41
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=97.18 E-value=0.1 Score=50.45 Aligned_cols=69 Identities=19% Similarity=0.234 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcC--CCCCCCCC---CcchhhhhhHHHhhhhhcC
Q 010543 341 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGGILSG 414 (507)
Q Consensus 341 ~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~GAa~~a~~~~~ 414 (507)
+.+.+.+.+.+++++.+ ++.|+|+||.++...+++.+.+.+. +.++..+. --|.+++.|++.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445555555555544 5789999999999999999998763 33443332 2356788888876544333
No 42
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.14 E-value=0.12 Score=49.86 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcC--CCCCCCCC---CcchhhhhhHHHhhh
Q 010543 343 RKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGG 410 (507)
Q Consensus 343 ~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~GAa~~a~ 410 (507)
+.+.+.+.++.+..+ ++.|+|+||.++...+++.|.+.+. +.++..+. --|..++.|++.+..
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~ 297 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRM 297 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHH
Confidence 333444444444433 5689999999999999999998762 34444433 224578888877554
No 43
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.09 E-value=0.087 Score=50.67 Aligned_cols=48 Identities=23% Similarity=0.103 Sum_probs=32.9
Q ss_pred CCeEEEEcCCCCC-HHHHHHHHhhcC---------CCCCCCCCCcchhhhhhHHHhhh
Q 010543 363 IDEIVLVGGSTRI-PKVQQLLKDYFD---------GKEPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 363 i~~V~lvGG~s~~-p~l~~~l~~~~~---------~~~v~~~~~p~~ava~GAa~~a~ 410 (507)
++.|+|.||.++. +.+.+.|++.+. ..++......+.+.++|||..+.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 5789999999876 666666655441 22344444566889999998764
No 44
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.05 E-value=0.039 Score=53.13 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=30.2
Q ss_pred HcCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEEE
Q 010543 197 IAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 197 ~agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
..|++ +.+.++..|+|++...... ...++++++-+|.| +=..++.
T Consensus 95 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 95 RVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 34776 6899999999987543322 23567888888877 4445443
No 45
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.90 E-value=0.12 Score=49.79 Aligned_cols=47 Identities=17% Similarity=0.120 Sum_probs=32.6
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcCCC--------CCCCCCCcchhhhhhHHHhh
Q 010543 363 IDEIVLVGGSTRIPKVQQLLKDYFDGK--------EPNKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 363 i~~V~lvGG~s~~p~l~~~l~~~~~~~--------~v~~~~~p~~ava~GAa~~a 409 (507)
++.|+|.||.+..+.+.+.+++.+... ++....-.+.+.++|||..+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 578999999998888888887766321 12222234678999999765
No 46
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.81 E-value=0.14 Score=48.79 Aligned_cols=48 Identities=21% Similarity=0.147 Sum_probs=30.9
Q ss_pred CCeEEEEcCCC-CC-HHHHHHHHhhcCC-------CCCCCCCCcchhhhhhHHHhhh
Q 010543 363 IDEIVLVGGST-RI-PKVQQLLKDYFDG-------KEPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 363 i~~V~lvGG~s-~~-p~l~~~l~~~~~~-------~~v~~~~~p~~ava~GAa~~a~ 410 (507)
++.|+|.||.+ .. +.+.+.+++.+.. .++....-.+.+.+.|||..+.
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 67899999887 54 6666666655421 1122333456789999998874
No 47
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.76 E-value=0.39 Score=45.42 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=37.3
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhh
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~ 411 (507)
+++.|+|.||.+..+.+.+.+++.++..++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 3678999999987788888888887544555555 557799999988754
No 48
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.67 E-value=0.52 Score=45.59 Aligned_cols=60 Identities=7% Similarity=-0.027 Sum_probs=39.6
Q ss_pred CcCcEEEEeCCCCCHHHHHHHHHHHHH-cC--CceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcc
Q 010543 171 KIKDAVVTVPAYFNDAQRQATKDAGII-AG--LNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGT 236 (507)
Q Consensus 171 ~~~~~viTVP~~~~~~qr~~l~~aa~~-ag--l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt 236 (507)
++..+.|++|...+......+.+..+. .+ ...+.+.++..|+|+++ . +.+.+++-+|.|.
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~-----~~~~v~v~~GTGi 132 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T-----PDGGVVLISGTGS 132 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C-----SSCEEEEEESSSE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C-----CCCcEEEEEcCCc
Confidence 467889999998887655556555544 33 13578899999999884 2 2344555556554
No 49
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.55 E-value=0.004 Score=60.67 Aligned_cols=79 Identities=19% Similarity=0.248 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHcCCceeEeechhhHHHHHh-hcccCC----CceeEEEEEcCCcceEEEEEEE--eC--CeEEEEEEcCC
Q 010543 187 QRQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG----GEKNILVFDLGGGTFDVSILTI--DN--GVFEVLSTNGD 257 (507)
Q Consensus 187 qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~-~~~~~~----~~~~~lv~D~Gggt~dvsv~~~--~~--~~~~v~~~~~~ 257 (507)
..+.+.++-+..|+++ .+|+..+-|.+.| +..... .....+++|+|||+|++++++- .. +.+ . ....
T Consensus 104 ~~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~S 179 (343)
T 3cer_A 104 REEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFS 179 (343)
T ss_dssp HHHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEE
T ss_pred HHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEE
Confidence 3455566666779875 5666666555554 222111 2356899999999999999864 22 111 0 1223
Q ss_pred CCCchHHHHHHH
Q 010543 258 THLGGEDFDQRV 269 (507)
Q Consensus 258 ~~~GG~~id~~l 269 (507)
.++|+..+.+.+
T Consensus 180 lplG~v~lt~~~ 191 (343)
T 3cer_A 180 MNIGSVRMTERH 191 (343)
T ss_dssp ESCCHHHHHHHT
T ss_pred EehhHHHHHHHh
Confidence 579999888776
No 50
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.55 E-value=0.17 Score=47.88 Aligned_cols=49 Identities=22% Similarity=0.121 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcC-----------CCCCCCCCCcchhhhhhHHHhhhh
Q 010543 363 IDEIVLVGGSTRIPKVQQLLKDYFD-----------GKEPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 363 i~~V~lvGG~s~~p~l~~~l~~~~~-----------~~~v~~~~~p~~ava~GAa~~a~~ 411 (507)
++.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.+.||+..+..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 5689999998877777766665441 122232334456899999987754
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.34 E-value=0.0047 Score=63.45 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCC
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 415 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~ 415 (507)
++++-+++.+.-.+...++........++.|.++||+++++.+.+.+.+.+ +.+|..+...+.+.|.|||+.|+.-.+.
T Consensus 360 ~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 360 ELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 344445555544444444433212234778999999999999999999999 7888776555556899999999765553
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.30 E-value=0.41 Score=45.27 Aligned_cols=49 Identities=20% Similarity=0.129 Sum_probs=35.4
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcCCC-----CCCCCCCcchhhhhhHHHhhhh
Q 010543 363 IDEIVLVGGSTRIPKVQQLLKDYFDGK-----EPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 363 i~~V~lvGG~s~~p~l~~~l~~~~~~~-----~v~~~~~p~~ava~GAa~~a~~ 411 (507)
++.|+|.||.+..+.+.+.|++.+... ++....-.+.+.+.||+..+..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 678999999998888888888877321 1222334467899999988754
No 53
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.24 E-value=0.17 Score=48.65 Aligned_cols=50 Identities=22% Similarity=0.225 Sum_probs=33.5
Q ss_pred CCeEEEEcCCCC-CHHHHHHHHhhcCC---------CCCCCCCCcchhhhhhHHHhhhhh
Q 010543 363 IDEIVLVGGSTR-IPKVQQLLKDYFDG---------KEPNKGVNPDEAVAYGAAVQGGIL 412 (507)
Q Consensus 363 i~~V~lvGG~s~-~p~l~~~l~~~~~~---------~~v~~~~~p~~ava~GAa~~a~~~ 412 (507)
++.|+|.||.+. .+.+.+.+++.+.. .++......+.+.+.||+..+...
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~~ 322 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQF 322 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHHh
Confidence 568999999886 57777777765521 122333345678999999887543
No 54
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.21 E-value=0.0073 Score=63.10 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=62.2
Q ss_pred eecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHH
Q 010543 328 PLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAV 407 (507)
Q Consensus 328 ~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~ 407 (507)
.-++.++-.+.+-+++.+.-.+...++........++.|.++||.++++.+.+.+.+.+ +.+|..+. ..++.|.|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~~-~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLPE-ESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEES-CSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEecC-CCcchHHHHHH
Confidence 34677775445566666555555444432212335889999999999999999999999 78876653 46789999999
Q ss_pred hhhhhcCCC
Q 010543 408 QGGILSGEG 416 (507)
Q Consensus 408 ~a~~~~~~~ 416 (507)
.|+.-.+..
T Consensus 486 lA~~a~G~~ 494 (554)
T 3l0q_A 486 MGTVAAGVF 494 (554)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHcCCc
Confidence 998765543
No 55
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=96.19 E-value=0.61 Score=48.26 Aligned_cols=185 Identities=16% Similarity=0.164 Sum_probs=91.9
Q ss_pred CcCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEEeCC
Q 010543 171 KIKDAVVTV-PAYFNDAQRQAT--KDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 247 (507)
Q Consensus 171 ~~~~~viTV-P~~~~~~qr~~l--~~aa~~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~ 247 (507)
+++.+.+|. |..++....-.. +..+...|++.+. ++.-.|-+++.......... +++-+.||++.+..+. .+
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p--~~l~vsGg~t~~~~~~--~~ 146 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP--LTLYVSGGNTQVIAYV--SK 146 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC--EEEEECSSCEEEEEEE--TT
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC--cEEEEcCCCcEEEEEe--CC
Confidence 456666665 766554332221 3344556777655 44444444433232221122 5555667777765444 68
Q ss_pred eEEEEEEcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCcEEEEEEeeccCCcceEE
Q 010543 248 VFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSE 327 (507)
Q Consensus 248 ~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~ 327 (507)
.++++...-+ .--|+.||..-.. .+...+..+ . |...|.+.+. .+.++....+.++++
T Consensus 147 ~~~~lg~t~d-~s~G~~~D~~a~~---------lgl~~~gg~-~---ie~lA~~g~~--------~~~~p~~~~~~~~sf 204 (540)
T 3en9_A 147 KYRVFGETLD-IAVGNCLDQFARY---------VNLPHPGGP-Y---IEELARKGKK--------LVDLPYTVKGMDIAF 204 (540)
T ss_dssp EEEEEEEBSS-SCHHHHHHHHHHH---------TTCCSSCHH-H---HHHHHHTCCC--------CCCCCCCEETTEECC
T ss_pred ceEEEeeccc-hHhHHHHHHHHHH---------cCCCCCCHH-H---HHHHHHcCCc--------cCcCCCCCCCcceec
Confidence 8888887664 4556777753322 243332212 1 1111211110 011111111222221
Q ss_pred e-------------ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcC
Q 010543 328 P-------------LTRARFEELNN-DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD 387 (507)
Q Consensus 328 ~-------------itr~~~e~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~ 387 (507)
. .+.+++-..++ .+++.+.+.+.++++..+ ++.|+|+||.+....+++.+.+.+.
T Consensus 205 sgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~ 273 (540)
T 3en9_A 205 SGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCE 273 (540)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHH
Confidence 1 01222222222 234444555556666544 5689999999999999999999763
No 56
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.17 E-value=0.0082 Score=61.81 Aligned_cols=78 Identities=22% Similarity=0.240 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcC
Q 010543 335 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 414 (507)
Q Consensus 335 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~ 414 (507)
.++++.+++.+.-.+...++...... .++.|.++||.++++.+.+.+.+.+ +.++..+. ..++.|.|||+.|+.-.+
T Consensus 367 ~~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~-~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 367 EHLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRPV-VKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEES-CSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEcC-CCcchHHHHHHHHHHHhC
Confidence 34455566666666666666543333 5789999999999999999999999 78876654 456899999999976555
Q ss_pred C
Q 010543 415 E 415 (507)
Q Consensus 415 ~ 415 (507)
.
T Consensus 444 ~ 444 (497)
T 2zf5_O 444 Y 444 (497)
T ss_dssp S
T ss_pred c
Confidence 3
No 57
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.16 E-value=0.0087 Score=62.25 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcC
Q 010543 335 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 414 (507)
Q Consensus 335 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~ 414 (507)
.++++-+++.+.-.+...++..+.....++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 5566666666666666667665544455789999999999999999999999 7887665 4567899999999875443
No 58
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.03 E-value=0.012 Score=60.82 Aligned_cols=78 Identities=13% Similarity=0.130 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCC-CCCCCcchhhhhhHHHhhhhhc
Q 010543 335 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP-NKGVNPDEAVAYGAAVQGGILS 413 (507)
Q Consensus 335 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v-~~~~~p~~ava~GAa~~a~~~~ 413 (507)
.++++.+++.+.-.+...++.... .. ++.|.++||+++++.+.+.+.+.+ +.+| ..+ .+.++.|.|||+.|+.-.
T Consensus 377 ~~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~lA~~a~ 452 (511)
T 3hz6_A 377 AQILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAALAAVEL 452 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHHHHHHh
Confidence 344555566665555555554433 34 889999999999999999999999 7887 654 578899999999998765
Q ss_pred CCC
Q 010543 414 GEG 416 (507)
Q Consensus 414 ~~~ 416 (507)
+..
T Consensus 453 G~~ 455 (511)
T 3hz6_A 453 EWS 455 (511)
T ss_dssp TSC
T ss_pred CCc
Confidence 543
No 59
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.98 E-value=0.012 Score=60.52 Aligned_cols=79 Identities=14% Similarity=0.060 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCC
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 415 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~ 415 (507)
++++-+++.+.-.+...++........++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+.
T Consensus 367 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 444 (504)
T 3ll3_A 367 EMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALGL 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcCc
Confidence 344445555544444444332111235889999999999999999999999 7887665 45678999999999876554
Q ss_pred C
Q 010543 416 G 416 (507)
Q Consensus 416 ~ 416 (507)
.
T Consensus 445 ~ 445 (504)
T 3ll3_A 445 N 445 (504)
T ss_dssp C
T ss_pred c
Confidence 3
No 60
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.97 E-value=0.0073 Score=62.37 Aligned_cols=75 Identities=23% Similarity=0.373 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHH---HHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhh
Q 010543 336 ELNNDLFRKTMGPVKK---AMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 412 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~ 412 (507)
++++-+++.+.-.+.. .|++.+. .++.|.++||.++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-
T Consensus 398 ~l~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a 472 (515)
T 3i8b_A 398 NLARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWV 472 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHH
Confidence 3444444444433333 3444443 4789999999999999999999999 7787664 45668899999999765
Q ss_pred cCC
Q 010543 413 SGE 415 (507)
Q Consensus 413 ~~~ 415 (507)
.+.
T Consensus 473 ~G~ 475 (515)
T 3i8b_A 473 LSG 475 (515)
T ss_dssp HHC
T ss_pred cCC
Confidence 443
No 61
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.79 E-value=0.69 Score=45.44 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=28.3
Q ss_pred cCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEE
Q 010543 198 AGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~ 242 (507)
.|++ +.+.++..|+|++........ .+++++-+|.| +=..++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTKRD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTTCC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCCCC-CcEEEEEeCCc-eEEEEE
Confidence 4775 689999999998764332223 67788888877 334444
No 62
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.62 E-value=0.047 Score=56.20 Aligned_cols=76 Identities=22% Similarity=0.296 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCceeEeechhhHHHHHh-hcccCC-CceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHH
Q 010543 188 RQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDF 265 (507)
Q Consensus 188 r~~l~~aa~~agl~~~~li~Ep~Aaa~~~-~~~~~~-~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~i 265 (507)
.+.+.++-+..|+++ .+|+..+-|.+.| +..... ..+..+|+|+|||+|.+++++ ++.... ....++|...+
T Consensus 99 ~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrl 172 (513)
T 1u6z_A 99 TDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVSF 172 (513)
T ss_dssp HHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHHH
Confidence 345555555679875 5666666555554 222211 123689999999999999875 444322 22257899888
Q ss_pred HHHH
Q 010543 266 DQRV 269 (507)
Q Consensus 266 d~~l 269 (507)
.+.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 63
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.57 E-value=0.013 Score=60.44 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCC
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEG 416 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~ 416 (507)
.++.|.++||+++++.+.+.+.+.+ +.+|... .+.++.|.|||+.|+.-.+..
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G~~ 456 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVGFW 456 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhCcc
Confidence 4789999999999999999999999 7777654 456789999999998766544
No 64
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.57 E-value=0.02 Score=58.79 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcC
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 414 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~ 414 (507)
++++.+++.+.-.+...++... .....++.|.++||.++++.+.+.+.+.+ +.+|... .+.++.|.|||+.|+.-.+
T Consensus 371 ~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 371 HLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 3444455555544444444331 11234678999999999999999999999 7887655 4456899999999876544
No 65
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.57 E-value=0.011 Score=61.13 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCC
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEG 416 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~ 416 (507)
.++.|.++||+++++.+.+.+.+.+ +.+|..+.. .++.|.|||+.|+.-.+..
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G~~ 452 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGGDD 452 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTCSS
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhCCC
Confidence 3789999999999999999999999 788876644 4588999999998766543
No 66
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.55 E-value=0.02 Score=59.34 Aligned_cols=83 Identities=18% Similarity=0.247 Sum_probs=56.5
Q ss_pred ecHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHH
Q 010543 329 LTRARFE-ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAV 407 (507)
Q Consensus 329 itr~~~e-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~ 407 (507)
-++.++- .+++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+ +.+|.++ ...++.|.|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHH
Confidence 3455443 23333333333333333333454 3789999999999999999999999 7888665 445789999999
Q ss_pred hhhhhcCCC
Q 010543 408 QGGILSGEG 416 (507)
Q Consensus 408 ~a~~~~~~~ 416 (507)
.|+.-.+..
T Consensus 446 lA~~a~G~~ 454 (526)
T 3ezw_A 446 LAGLAVGFW 454 (526)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCCC
Confidence 998766654
No 67
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.47 E-value=0.55 Score=45.01 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=28.0
Q ss_pred cCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEE
Q 010543 198 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~ 242 (507)
.+++ +.+.++..|+|++...... ...++++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4665 6899999999987533221 13467788888877 334444
No 68
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.45 E-value=0.0097 Score=61.60 Aligned_cols=53 Identities=21% Similarity=0.119 Sum_probs=43.6
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCC
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEG 416 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~ 416 (507)
.++.|.++||.++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+..
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 4788999999999999999999999 7887654 456789999999998766543
No 69
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.39 E-value=0.012 Score=61.57 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCC-CCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHh
Q 010543 330 TRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGST-RIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 408 (507)
Q Consensus 330 tr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s-~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~ 408 (507)
++.+ +++-+++.+.-.+...++........++.|.++||++ +++.+.+.+.+.+ +.+|... .+.++.|.|||+.
T Consensus 410 t~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 4554 4445555554444444433211223478999999999 9999999999999 7777654 4578899999999
Q ss_pred hhhhcC
Q 010543 409 GGILSG 414 (507)
Q Consensus 409 a~~~~~ 414 (507)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987655
No 70
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.37 E-value=0.015 Score=59.89 Aligned_cols=53 Identities=23% Similarity=0.267 Sum_probs=44.7
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCC
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEG 416 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~ 416 (507)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+..
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 455 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVGFW 455 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTTSS
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhCcc
Confidence 4789999999999999999999999 7777654 466789999999998765543
No 71
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.36 E-value=0.012 Score=60.77 Aligned_cols=53 Identities=23% Similarity=0.306 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCCC
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEG 416 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~~ 416 (507)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+..
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 453 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGFW 453 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhCcc
Confidence 3789999999999999999999999 7777654 456789999999998765543
No 72
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.31 E-value=0.17 Score=46.57 Aligned_cols=21 Identities=24% Similarity=0.449 Sum_probs=18.3
Q ss_pred cEEEEEcCccceEEEEEECCe
Q 010543 37 TVIGIDLGTTYSCVGVYKNGH 57 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g~ 57 (507)
..++||+|+|+++.++++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 479999999999999997653
No 73
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=95.17 E-value=2.1 Score=40.67 Aligned_cols=50 Identities=20% Similarity=0.241 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCCCC-----HHHHHHHHhhcCC------CCCCCCCCcchhhhhhHHHhhhh
Q 010543 362 QIDEIVLVGGSTRI-----PKVQQLLKDYFDG------KEPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 362 ~i~~V~lvGG~s~~-----p~l~~~l~~~~~~------~~v~~~~~p~~ava~GAa~~a~~ 411 (507)
+++.|+|-||.++. +.+++.+++.+.. .++....-.+.+.++|||..+..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 36789999998875 3577777766521 11222223467899999988753
No 74
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.01 E-value=0.043 Score=56.46 Aligned_cols=52 Identities=27% Similarity=0.341 Sum_probs=43.9
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCC
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 415 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~ 415 (507)
.++.|.++||.++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+.
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G~ 454 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVGF 454 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcCc
Confidence 3688999999999999999999999 7887655 44678999999999766553
No 75
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.95 E-value=0.022 Score=58.61 Aligned_cols=51 Identities=22% Similarity=0.221 Sum_probs=43.0
Q ss_pred C-CeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhhcCC
Q 010543 363 I-DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 415 (507)
Q Consensus 363 i-~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~~~~ 415 (507)
+ +.|.++||.++++.+.+.+.+.+ +.+|... .+.++.|.|||+.|+.-.+.
T Consensus 407 ~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 407 MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred ccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 5 78999999999999999999999 7787654 44568999999999766553
No 76
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.67 E-value=1.4 Score=43.52 Aligned_cols=43 Identities=14% Similarity=0.250 Sum_probs=28.6
Q ss_pred cCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEE
Q 010543 198 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~ 242 (507)
.|++ +.+.++..|+|++...... ....+++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4775 6789999999987543322 23467788888877 444544
No 77
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.57 E-value=0.031 Score=57.38 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhh
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~ 411 (507)
.++.|.++||+++++.+.+.+.+.+ +.+|.... .++.|.||++.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHH
Confidence 3788999999999999999999999 78876543 58899999665543
No 78
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.76 E-value=2.9 Score=41.61 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=28.6
Q ss_pred cCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEE
Q 010543 198 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~ 242 (507)
.|++ +.+.++..|+|++...... ....+++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 4775 6899999999987543322 23467788888877 344444
No 79
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=93.60 E-value=3.9 Score=38.27 Aligned_cols=70 Identities=6% Similarity=-0.143 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCC--HHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhhhh
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRI--PKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 412 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~--p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~~~ 412 (507)
.....++++..+.+-..+ .... ..+++.|++.||-++. +.+++.+++... ++ ..|..+...||+.++...
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHhh
Confidence 344455555555555555 2221 1156789999998876 667777766531 22 235578999999998653
No 80
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.06 E-value=0.17 Score=51.61 Aligned_cols=72 Identities=11% Similarity=-0.007 Sum_probs=53.2
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhh-cCCCCCCCCCCcchhhhhhHHHhhhh
Q 010543 335 EELNNDLFRK--TMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDY-FDGKEPNKGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 335 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~-~~~~~v~~~~~p~~ava~GAa~~a~~ 411 (507)
..+.+.+++. +.-.+.+.++.... .+.|.++||+++++.+.+.+.+. | +.++..+. ..++.|.|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4555556553 45555556665331 26899999999999999999999 9 78877664 356789999999865
Q ss_pred h
Q 010543 412 L 412 (507)
Q Consensus 412 ~ 412 (507)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 3
No 81
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=90.70 E-value=11 Score=35.33 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCC--CHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhh
Q 010543 337 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTR--IPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 337 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~--~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~ 410 (507)
....++++..+.+-..+...-.. ++..|+|.||.+. .+++.+.+++.+ . .|+.+.+.||++++.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 34455666666666655554322 5778999999864 567777777764 1 145668999999874
No 82
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=89.98 E-value=1.6 Score=44.12 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHcCCce--eEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEE
Q 010543 185 DAQRQATKDAGIIAGLNV--ARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTI 244 (507)
Q Consensus 185 ~~qr~~l~~aa~~agl~~--~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~ 244 (507)
..-.+.++++.+.-|+++ +.++++..|++++..+.. ....+-+=+|-|+=-+.+.+.
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~---~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD---PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC---CCcEEEEEEecCcceEEEeec
Confidence 455778889998888864 678999999999876542 345555566777665555543
No 83
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=88.75 E-value=0.7 Score=46.51 Aligned_cols=55 Identities=13% Similarity=0.001 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHcCCc--eeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEE
Q 010543 186 AQRQATKDAGIIAGLN--VARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 186 ~qr~~l~~aa~~agl~--~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
.-++.++++.+..|++ ++.++++..|++++..+.. .++++.+=+|-|+=-..+.+
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~---~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD---AXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC---CccEEEEEECcEEEEEEEEC
Confidence 5567788887666664 4789999999999876622 34566666777755444444
No 84
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=88.43 E-value=1.1 Score=45.94 Aligned_cols=77 Identities=17% Similarity=0.243 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHcCCceeEeechhhHHHHHh-hcccCCCceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHH
Q 010543 186 AQRQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGED 264 (507)
Q Consensus 186 ~qr~~l~~aa~~agl~~~~li~Ep~Aaa~~~-~~~~~~~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~ 264 (507)
+..+.+.++-+..|+++ .+|+..+-|.+.| +..........+|+|+|||+|.+++++ ++.+. .....++|.-.
T Consensus 101 N~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vr 174 (508)
T 3hi0_A 101 NGPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLR 174 (508)
T ss_dssp THHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHH
T ss_pred CHHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEe
Confidence 34556666767789986 5666555555444 332222223459999999999999987 44321 12235788877
Q ss_pred HHHH
Q 010543 265 FDQR 268 (507)
Q Consensus 265 id~~ 268 (507)
+.+.
T Consensus 175 l~e~ 178 (508)
T 3hi0_A 175 LSEQ 178 (508)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 7763
No 85
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=87.86 E-value=26 Score=36.04 Aligned_cols=79 Identities=18% Similarity=0.158 Sum_probs=50.3
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCC-CCcchhhhhhHHHh
Q 010543 331 RARFEELNND-LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKG-VNPDEAVAYGAAVQ 408 (507)
Q Consensus 331 r~~~e~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~-~~p~~ava~GAa~~ 408 (507)
..++-..++. +.+-+.+.+..+.++.+ ++.|.|+||.+....+++.|.+..+-..+..+ ..-|..++.|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3444333333 33334444555555544 67999999999999999999876521133222 23467899999998
Q ss_pred hhhhcC
Q 010543 409 GGILSG 414 (507)
Q Consensus 409 a~~~~~ 414 (507)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876544
No 86
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=87.77 E-value=0.96 Score=43.75 Aligned_cols=74 Identities=14% Similarity=0.205 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCC----CCCcchhhhhhHHHhhhh
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK----GVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~----~~~p~~ava~GAa~~a~~ 411 (507)
++..-+..-+.+.|.+.++... ..++.|+++||+++.|.|.++|++.+++.++.. ..+++.-=|..-|+.|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3333444444555555555432 236789999999999999999999997555432 234554444555666654
Q ss_pred h
Q 010543 412 L 412 (507)
Q Consensus 412 ~ 412 (507)
.
T Consensus 337 ~ 337 (371)
T 3qbx_A 337 F 337 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 87
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=83.88 E-value=2 Score=41.55 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCC----CCCCcchhhhhhHHHhhhh
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPN----KGVNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~----~~~~p~~ava~GAa~~a~~ 411 (507)
++..-+.+-+.+.|.+.+++.. ..+.|+++||+++.|.|.++|++.+++.++. ...+++.-=|..-|+.|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4444455555566666665542 3568999999999999999999999764442 2234443333334555554
Q ss_pred h
Q 010543 412 L 412 (507)
Q Consensus 412 ~ 412 (507)
.
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 3
No 88
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=83.05 E-value=3 Score=43.74 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCC---CCcchhhhhhHHHhhhh
Q 010543 362 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKG---VNPDEAVAYGAAVQGGI 411 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~---~~p~~ava~GAa~~a~~ 411 (507)
.++.|+|+||.++..+|++.|.+.+.+.++..+ .--|-++|.|.++.|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 367999999999999999999998754443322 23367899999988753
No 89
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=80.84 E-value=4.2 Score=43.69 Aligned_cols=50 Identities=20% Similarity=0.415 Sum_probs=39.0
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcC--CCCCCCCCC---cchhhhhhHHHhhhhh
Q 010543 363 IDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGVN---PDEAVAYGAAVQGGIL 412 (507)
Q Consensus 363 i~~V~lvGG~s~~p~l~~~l~~~~~--~~~v~~~~~---p~~ava~GAa~~a~~~ 412 (507)
++.|+|+||.+....+++.+.+.+. +.++..+.. -|..+|.|+|++|+..
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 6789999999999999999999874 344554432 3778999999887653
No 90
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=79.43 E-value=6.2 Score=39.52 Aligned_cols=56 Identities=18% Similarity=0.148 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHcCCce--eEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEE
Q 010543 185 DAQRQATKDAGIIAGLNV--ARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 185 ~~qr~~l~~aa~~agl~~--~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
..-.+.++++....|+++ +.++++..|++++..+.. ....+-+=+|-|+=-..+.+
T Consensus 172 ~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~---~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 172 HNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED---PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp SBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred CcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC---CCcEEEEEEeCCcceEEEEc
Confidence 455778888887778763 488999999999876653 34556666777755544444
No 91
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=78.80 E-value=3.1 Score=44.49 Aligned_cols=52 Identities=25% Similarity=0.307 Sum_probs=38.7
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcC--CCCCCCC---CCcchhhhhhHHHhhhhhcC
Q 010543 363 IDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKG---VNPDEAVAYGAAVQGGILSG 414 (507)
Q Consensus 363 i~~V~lvGG~s~~p~l~~~l~~~~~--~~~v~~~---~~p~~ava~GAa~~a~~~~~ 414 (507)
++.|+|+||.++...|++.|.+.+. +.++..+ .--|-++|.|.|+.+.....
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 6789999999999999999988862 3333322 12367899999998865433
No 92
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=77.40 E-value=1.4 Score=45.43 Aligned_cols=22 Identities=27% Similarity=0.306 Sum_probs=18.9
Q ss_pred cCCcEEEEEcCccceEEEEEEC
Q 010543 34 KLGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 34 ~~~~viGID~GTt~s~va~~~~ 55 (507)
++++++|||+|||++++++++.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECT
T ss_pred CceEEEEEEccccceeeeEEcC
Confidence 4679999999999999999873
No 93
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=77.06 E-value=11 Score=36.65 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=19.7
Q ss_pred cCCcEEEEEcCccceEEEEEECC
Q 010543 34 KLGTVIGIDLGTTYSCVGVYKNG 56 (507)
Q Consensus 34 ~~~~viGID~GTt~s~va~~~~g 56 (507)
+...++|||+|.|++.+++.++|
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d~G 29 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQGG 29 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEETT
T ss_pred CCCEEEEEEECcceEEEEEEECC
Confidence 45689999999999999998844
No 94
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=75.65 E-value=1.9 Score=33.18 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=17.7
Q ss_pred cEEEEEcCccceEEEEEECC
Q 010543 37 TVIGIDLGTTYSCVGVYKNG 56 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g 56 (507)
.++|||+|+..+.+|+.+..
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 48999999999999998754
No 95
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=75.33 E-value=1.3 Score=45.10 Aligned_cols=21 Identities=43% Similarity=0.558 Sum_probs=16.7
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++++.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp ---CEEEEECSSEEEEEEECT
T ss_pred hceEEEEEcCCCCeEEEEEEC
Confidence 568999999999999999873
No 96
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=74.79 E-value=5.2 Score=38.63 Aligned_cols=42 Identities=24% Similarity=0.361 Sum_probs=28.3
Q ss_pred eeEeechhhHHHHHh-----hcccC--CCceeEEEEEcCCcceEEEEEE
Q 010543 202 VARIINEPTAAAIAY-----GLDKK--GGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 202 ~~~li~Ep~Aaa~~~-----~~~~~--~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
.+++|+-.+-|.+.| .+... ...++++++|+|||+|.++...
T Consensus 110 ~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 110 EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 356777766666654 22211 1234699999999999999874
No 97
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=73.93 E-value=18 Score=34.45 Aligned_cols=43 Identities=23% Similarity=0.225 Sum_probs=28.4
Q ss_pred cCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEE
Q 010543 198 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~ 242 (507)
.|++ +.+.++..|+|++...... ....+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 4765 6889999999987643322 23457788888877 444444
No 98
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=73.64 E-value=9.1 Score=35.98 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=28.3
Q ss_pred HcCCceeEeechhhHHHHHhhcccC-CCceeEEEEEcCCcceEEEEE
Q 010543 197 IAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 197 ~agl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lv~D~Gggt~dvsv~ 242 (507)
..|++ +.+.++..|+|++-..... ...++++++-+|.| .=.+++
T Consensus 96 ~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 96 EMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 34776 6899999999987644322 23456777777765 333444
No 99
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=73.59 E-value=1.9 Score=44.13 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=18.6
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++.+.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADR 24 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCceEEEEECC
Confidence 458999999999999999873
No 100
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=72.96 E-value=2.5 Score=43.22 Aligned_cols=21 Identities=33% Similarity=0.398 Sum_probs=18.3
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+.+++|||+|||++++++++.
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCcceEEEEECC
Confidence 468999999999999999974
No 101
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=72.58 E-value=2.4 Score=43.89 Aligned_cols=21 Identities=33% Similarity=0.561 Sum_probs=18.7
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECcccEEEEEECC
Confidence 458999999999999999873
No 102
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=71.68 E-value=2.2 Score=43.54 Aligned_cols=21 Identities=38% Similarity=0.517 Sum_probs=18.5
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 458999999999999999874
No 103
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=71.56 E-value=2.4 Score=43.38 Aligned_cols=21 Identities=29% Similarity=0.302 Sum_probs=18.6
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++.+.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 468999999999999999873
No 104
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=71.22 E-value=2.8 Score=42.94 Aligned_cols=20 Identities=30% Similarity=0.232 Sum_probs=18.4
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 010543 35 LGTVIGIDLGTTYSCVGVYK 54 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~ 54 (507)
+++++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 45899999999999999998
No 105
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=69.20 E-value=16 Score=36.30 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHcC---CceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEE
Q 010543 186 AQRQATKDAGIIAG---LNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTI 244 (507)
Q Consensus 186 ~qr~~l~~aa~~ag---l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~ 244 (507)
.-.+.+++|.+.-+ ++++.++++.+|+.++..+.. ....+-+=+|-||=-+.+.+.
T Consensus 161 dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~---~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 161 DVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED---PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp BHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEEG
T ss_pred cHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC---CCceEEEEEeCCceEEEEEec
Confidence 44777888887753 567889999999999875543 334455556776555444433
No 106
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=68.89 E-value=2.6 Score=42.84 Aligned_cols=20 Identities=20% Similarity=0.403 Sum_probs=17.8
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 010543 35 LGTVIGIDLGTTYSCVGVYK 54 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~ 54 (507)
++.++|||+|||++++++.+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 45799999999999999986
No 107
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=68.85 E-value=4 Score=33.53 Aligned_cols=20 Identities=30% Similarity=0.320 Sum_probs=18.3
Q ss_pred cEEEEEcCccceEEEEEECC
Q 010543 37 TVIGIDLGTTYSCVGVYKNG 56 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g 56 (507)
.++|||+|+..+.+|+.+..
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 58999999999999999865
No 108
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=68.76 E-value=13 Score=40.77 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEE
Q 010543 184 NDAQRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 184 ~~~qr~~l~~aa~~a-gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
...-.+.++++...- ++ +++.++++..|++++..+.. ..+.+-+=+|-|+=-..+.+
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~---~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE---PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC---CCcEEEEEEeCCeeEEEEEc
Confidence 445577778877654 45 58899999999998876653 34556666677765555444
No 109
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=68.41 E-value=15 Score=40.40 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcC-Cc--eeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEE
Q 010543 185 DAQRQATKDAGIIAG-LN--VARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 185 ~~qr~~l~~aa~~ag-l~--~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
..-++.++++....| ++ ++.++++..|++++..+. ..++++.+=+|-|+=-..+.+
T Consensus 183 ~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~---~~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 183 ADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD---DQHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp SBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH---CTTEEEEEEESSSEEEEEEEE
T ss_pred CchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc---CCCcEEEEEEECCcceEEEec
Confidence 345677777777666 54 689999999999987555 234566666677654444433
No 110
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=67.97 E-value=3.6 Score=42.00 Aligned_cols=21 Identities=33% Similarity=0.385 Sum_probs=18.7
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEcCCCceEEEEECC
Confidence 458999999999999999874
No 111
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=67.89 E-value=3.9 Score=37.78 Aligned_cols=71 Identities=17% Similarity=0.275 Sum_probs=40.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHH
Q 010543 329 LTRARFEELNNDLFRKTMGPVKKAMEDAGLE--KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAA 406 (507)
Q Consensus 329 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa 406 (507)
+-++..+.+-.-++......|+..+++.... ...--.|+++||.+.. +.+. +.....+|+ -+-.|..
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~--l~~~--------~~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASL--FDKQ--------GLYDHLVPD-LVLQGIR 250 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGG--GTTT--------TCCSEECTT-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHH--hccC--------CCCCEECcC-hHHHHHH
Confidence 4566666776777777777666666543211 1112379999999863 2221 111123444 4778887
Q ss_pred Hhhh
Q 010543 407 VQGG 410 (507)
Q Consensus 407 ~~a~ 410 (507)
+...
T Consensus 251 ~i~~ 254 (266)
T 3djc_A 251 LAAM 254 (266)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 112
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=67.53 E-value=83 Score=29.56 Aligned_cols=41 Identities=32% Similarity=0.325 Sum_probs=28.7
Q ss_pred HHcCCceeEeechhhHHHHHhhccc-----------CCCceeEEEEEcCCcc
Q 010543 196 IIAGLNVARIINEPTAAAIAYGLDK-----------KGGEKNILVFDLGGGT 236 (507)
Q Consensus 196 ~~agl~~~~li~Ep~Aaa~~~~~~~-----------~~~~~~~lv~D~Gggt 236 (507)
+..|++.+.+.++..|+|++-.... ....++++++-+|.|-
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi 150 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL 150 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc
Confidence 3458877899999999999764321 1234667888888773
No 113
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=66.12 E-value=4.1 Score=41.95 Aligned_cols=21 Identities=19% Similarity=0.118 Sum_probs=18.8
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+.+++|||+|||.+++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 469999999999999999874
No 114
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=66.11 E-value=3.6 Score=38.48 Aligned_cols=24 Identities=21% Similarity=0.205 Sum_probs=18.5
Q ss_pred cCCcEEEEEcCccceEEEEEECCe
Q 010543 34 KLGTVIGIDLGTTYSCVGVYKNGH 57 (507)
Q Consensus 34 ~~~~viGID~GTt~s~va~~~~g~ 57 (507)
+....+|||+|+|.+++++.++++
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~~~~ 41 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQDNQ 41 (287)
T ss_dssp ---CEEEEEECSSEEEEEEECSSC
T ss_pred CCCeEEEEEEChhhEEEEEEcCCE
Confidence 346889999999999999986553
No 115
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=65.62 E-value=3.6 Score=42.17 Aligned_cols=22 Identities=36% Similarity=0.534 Sum_probs=18.9
Q ss_pred CcEEEEEcCccceEEEEEE-CCe
Q 010543 36 GTVIGIDLGTTYSCVGVYK-NGH 57 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~-~g~ 57 (507)
+.++|||+|||++++++.+ +|+
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~ 48 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK 48 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC
T ss_pred CeEEEEEeCCcceEEEEECCCCC
Confidence 5899999999999999987 443
No 116
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=64.06 E-value=3.6 Score=34.34 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=17.7
Q ss_pred cEEEEEcCccceEEEEEECC
Q 010543 37 TVIGIDLGTTYSCVGVYKNG 56 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~g 56 (507)
.++|||+|+..+.+|+.+..
T Consensus 4 riLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEccCCEEEEEEEECC
Confidence 69999999999999998743
No 117
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=63.58 E-value=14 Score=37.05 Aligned_cols=43 Identities=21% Similarity=0.333 Sum_probs=30.0
Q ss_pred ceeEeechhhHHHHHh-----hcccC-----------CCceeEEEEEcCCcceEEEEEE
Q 010543 201 NVARIINEPTAAAIAY-----GLDKK-----------GGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 201 ~~~~li~Ep~Aaa~~~-----~~~~~-----------~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
..+++|+-.+-|.+.| .+... .....++++|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 4568888877777665 22211 0145689999999999999874
No 118
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=62.33 E-value=9.8 Score=35.25 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=32.7
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcCCC------CCCCCCCcchhhhhhHHHhh
Q 010543 363 IDEIVLVGGSTRIPKVQQLLKDYFDGK------EPNKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 363 i~~V~lvGG~s~~p~l~~~l~~~~~~~------~v~~~~~p~~ava~GAa~~a 409 (507)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.+.||+..+
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 567999999887788888888877432 12222334567899999876
No 119
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=62.26 E-value=4.6 Score=41.14 Aligned_cols=20 Identities=30% Similarity=0.403 Sum_probs=18.0
Q ss_pred CcEEEEEcCccceEEEEEEC
Q 010543 36 GTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~ 55 (507)
++++|||+|||++++++.+.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 48999999999999999873
No 120
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=61.69 E-value=4.6 Score=41.18 Aligned_cols=20 Identities=25% Similarity=0.351 Sum_probs=17.9
Q ss_pred CcEEEEEcCccceEEEEEEC
Q 010543 36 GTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~ 55 (507)
..++|||+|||++++++++.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEeCCcceEEEEECC
Confidence 47899999999999999874
No 121
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=60.98 E-value=19 Score=36.11 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcC---CceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEEE
Q 010543 185 DAQRQATKDAGIIAG---LNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTI 244 (507)
Q Consensus 185 ~~qr~~l~~aa~~ag---l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~~ 244 (507)
..-.+.+++|.+.-| ++++.++++.+|..++..+.. +...+-+=+|-||=-+.+-+.
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~---~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED---HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC---CCceEEEEEecCCceEEeeec
Confidence 345778888988877 467789999999988776543 334455556777665444443
No 122
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=60.75 E-value=6.4 Score=37.39 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=27.2
Q ss_pred eeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEEE
Q 010543 202 VARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 202 ~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~~ 243 (507)
.......|.|.|...+.. . ....+++|+|+.|||+..+.
T Consensus 107 ~~~aaanw~ASa~~~A~~-~--~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 107 MKVSASNWCGTAKWVSKN-I--EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGTBCCSSHHHHHHHHHH-T--CSSEEEEEECSSCEEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHh-c--CCCEEEEEcCcchhhhhhhc
Confidence 334566777777733333 1 13579999999999999887
No 123
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=60.32 E-value=4.5 Score=41.10 Aligned_cols=20 Identities=25% Similarity=0.311 Sum_probs=17.3
Q ss_pred CcEEEEEcCccceEEEEEEC
Q 010543 36 GTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~ 55 (507)
+.++|||+|||++++++.+.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 36899999999999999873
No 124
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=59.82 E-value=5 Score=41.63 Aligned_cols=21 Identities=24% Similarity=0.237 Sum_probs=18.3
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
+++++|||+|||++++++.+.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 458999999999999999974
No 125
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=58.68 E-value=5.4 Score=40.53 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=17.9
Q ss_pred CcEEEEEcCccceEEEEEEC
Q 010543 36 GTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~ 55 (507)
..++|||+|||++++++.+.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 47899999999999999874
No 126
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=55.68 E-value=15 Score=30.81 Aligned_cols=18 Identities=33% Similarity=0.658 Sum_probs=16.2
Q ss_pred cEEEEEcCccceEEEEEE
Q 010543 37 TVIGIDLGTTYSCVGVYK 54 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~ 54 (507)
.++|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999875
No 127
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=53.91 E-value=37 Score=34.16 Aligned_cols=56 Identities=16% Similarity=0.345 Sum_probs=34.8
Q ss_pred CceeEEEEEcCCcceEEEEEEEeCC-eEEEE----EEcCCCCCc-hHHHHHHHHHHHHHHHH
Q 010543 223 GEKNILVFDLGGGTFDVSILTIDNG-VFEVL----STNGDTHLG-GEDFDQRVMEYFIKLIK 278 (507)
Q Consensus 223 ~~~~~lv~D~Gggt~dvsv~~~~~~-~~~v~----~~~~~~~~G-G~~id~~l~~~l~~~~~ 278 (507)
+...++.+|+||.++-+.+++..+. .+++. ....+...| |..+=..+++.+.+.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~ 139 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVD 139 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999765 23332 222222233 55555555555544443
No 128
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=50.67 E-value=8.7 Score=39.09 Aligned_cols=19 Identities=42% Similarity=0.482 Sum_probs=17.3
Q ss_pred cEEEEEcCccceEEEEEEC
Q 010543 37 TVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~~ 55 (507)
+++|||+|||++++++.+.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 6899999999999999873
No 129
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=50.23 E-value=28 Score=34.62 Aligned_cols=42 Identities=24% Similarity=0.392 Sum_probs=28.5
Q ss_pred eeEeechhhHHHHHh-----hcccCC--CceeEEEEEcCCcceEEEEEE
Q 010543 202 VARIINEPTAAAIAY-----GLDKKG--GEKNILVFDLGGGTFDVSILT 243 (507)
Q Consensus 202 ~~~li~Ep~Aaa~~~-----~~~~~~--~~~~~lv~D~Gggt~dvsv~~ 243 (507)
.+++|+..+-+.++| .+.... ....+.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 467888777776655 222111 235688999999999998664
No 130
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=49.68 E-value=26 Score=34.01 Aligned_cols=49 Identities=22% Similarity=0.174 Sum_probs=33.4
Q ss_pred CCCeEEEEcCCCCCHH-HHHHHHhhcCCC---CCCCCCCcchhhhhhHHHhhh
Q 010543 362 QIDEIVLVGGSTRIPK-VQQLLKDYFDGK---EPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 362 ~i~~V~lvGG~s~~p~-l~~~l~~~~~~~---~v~~~~~p~~ava~GAa~~a~ 410 (507)
+++.|+|.||.+..+. +.+.+++.+... .+........+.+.||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 4789999999987544 888888877432 122222333589999998764
No 131
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=49.41 E-value=8.8 Score=38.80 Aligned_cols=20 Identities=45% Similarity=0.571 Sum_probs=17.2
Q ss_pred EEEEEcCccceEEEEEE-CCe
Q 010543 38 VIGIDLGTTYSCVGVYK-NGH 57 (507)
Q Consensus 38 viGID~GTt~s~va~~~-~g~ 57 (507)
++|||+|||++++++.+ +|.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~ 22 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE 22 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEecCcccEEEEECCCCC
Confidence 69999999999999987 443
No 132
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=48.64 E-value=75 Score=31.62 Aligned_cols=56 Identities=11% Similarity=0.137 Sum_probs=36.5
Q ss_pred CceeEEEEEcCCcceEEEEEEEeCCe---EEEEEEcCCCCC---chHHHHHHHHHHHHHHHH
Q 010543 223 GEKNILVFDLGGGTFDVSILTIDNGV---FEVLSTNGDTHL---GGEDFDQRVMEYFIKLIK 278 (507)
Q Consensus 223 ~~~~~lv~D~Gggt~dvsv~~~~~~~---~~v~~~~~~~~~---GG~~id~~l~~~l~~~~~ 278 (507)
+...++.+|+||.++-+.++...+.. .+.....-.... ++..+=..+++.+.+.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~ 120 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSS 120 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHh
Confidence 55678999999999999999987765 222222221222 666666666666655443
No 133
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=48.48 E-value=32 Score=35.80 Aligned_cols=59 Identities=15% Similarity=0.256 Sum_probs=46.1
Q ss_pred ceEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHH
Q 010543 324 DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLK 383 (507)
Q Consensus 324 ~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~ 383 (507)
...+.||+.|++++.. ....+..-++-+|++++++.++|+.|+|.||+...=-..+.+.
T Consensus 497 ~~~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 497 NKDIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp SSCEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred CCcEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 3457899999998643 3445666778889999999999999999999988666666554
No 134
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=48.43 E-value=17 Score=26.88 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=25.5
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 010543 175 AVVTVPAYFNDAQRQATKDAGIIAGLNV 202 (507)
Q Consensus 175 ~viTVP~~~~~~qr~~l~~aa~~agl~~ 202 (507)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4788999999999999999999999854
No 135
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=47.12 E-value=14 Score=33.95 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=40.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHh
Q 010543 329 LTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 408 (507)
Q Consensus 329 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~ 408 (507)
+-++..+.+-.-++......|+..+++.......--.|+++||.+. .+ ...++ . ....+|+ -+-.|..+.
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~--~l----~~~~~-~--~~~~~~~-LvL~GL~~i 249 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK--LI----SEESN-V--IDVVDPF-LTLKGLYML 249 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH--HH----HHHCS-S--CSEECTT-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH--HH----HhhCC-C--CCEECcc-hHHHHHHHH
Confidence 4555666666667777666666665543111111347999999864 33 34442 1 1123443 377788766
Q ss_pred hh
Q 010543 409 GG 410 (507)
Q Consensus 409 a~ 410 (507)
..
T Consensus 250 ~~ 251 (268)
T 2h3g_X 250 YE 251 (268)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 136
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=46.37 E-value=14 Score=31.18 Aligned_cols=19 Identities=42% Similarity=0.433 Sum_probs=16.7
Q ss_pred CcEEEEEcCccceEEEEEE
Q 010543 36 GTVIGIDLGTTYSCVGVYK 54 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~ 54 (507)
+.++|||.|++++..++.+
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 3689999999999999875
No 137
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=46.14 E-value=13 Score=33.98 Aligned_cols=25 Identities=36% Similarity=0.474 Sum_probs=18.6
Q ss_pred hhhccCCcEEEEEcCccceEEEEEE
Q 010543 30 EEATKLGTVIGIDLGTTYSCVGVYK 54 (507)
Q Consensus 30 ~~~~~~~~viGID~GTt~s~va~~~ 54 (507)
.++.+.+.++|||+|.|+++++..+
T Consensus 6 ~~~~~~~~~lgidiggt~i~~~l~d 30 (267)
T 1woq_A 6 EKSHKNAPLIGIDIGGTGIKGGIVD 30 (267)
T ss_dssp -----CCCEEEEEECSSEEEEEEEE
T ss_pred hhcCCCCEEEEEEECCCEEEEEEEE
Confidence 3455667899999999999999988
No 138
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=44.80 E-value=57 Score=33.90 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=62.3
Q ss_pred ceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCC--CCchHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Q 010543 224 EKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDT--HLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAER 301 (507)
Q Consensus 224 ~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~--~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 301 (507)
..+=+.+|+|..|+-..++....+..--....-+. ..|.+-+++.-+.. +
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~-----~----------------------- 256 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVD-----E----------------------- 256 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHH-----H-----------------------
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHh-----c-----------------------
Confidence 34558999998888888888877754322222222 35665555443221 0
Q ss_pred HHHHhccCcEEEEEEeeccCCcceEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCH
Q 010543 302 AKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIP 376 (507)
Q Consensus 302 ~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p 376 (507)
...-.+++-+-+++.+.+++.+..+++++++++|..+.++|-.+..-
T Consensus 257 ----------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~h 303 (631)
T 3zyy_X 257 ----------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTH 303 (631)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHH
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHH
Confidence 01123344445667778888888899999999999999999765443
No 139
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=44.15 E-value=9.3 Score=39.77 Aligned_cols=47 Identities=26% Similarity=0.451 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCc--CCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 340 DLFRKTMGPVKKAMEDAGLEK--NQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 340 ~~~~~i~~~i~~~l~~~~~~~--~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
|+=+.|++-|..+......++ +-.+.|++|||+|.+|++.-.|.+..
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHH
Confidence 344445555553332212221 33578999999999999998888876
No 140
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=40.23 E-value=17 Score=37.06 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=26.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCceeE
Q 010543 173 KDAVVTVPAYFNDAQRQATKDAGIIAGLNVAR 204 (507)
Q Consensus 173 ~~~viTVP~~~~~~qr~~l~~aa~~agl~~~~ 204 (507)
..++.-+|..++...-..+.+++...|+++..
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~ 162 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVA 162 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEE
Confidence 45666699999999999999999998886654
No 141
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=39.49 E-value=41 Score=31.34 Aligned_cols=20 Identities=25% Similarity=0.303 Sum_probs=17.9
Q ss_pred CcEEEEEcCccceEEEEEEC
Q 010543 36 GTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~ 55 (507)
+.++|||+|.|++++++.+.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~ 22 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE 22 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECcceeEEEEEEC
Confidence 57899999999999999873
No 142
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=38.67 E-value=36 Score=31.81 Aligned_cols=49 Identities=14% Similarity=0.166 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 335 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 335 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
.++++...+.+.+.++++|+++++++++|++|+.-|++.+ +-+.+.+.|
T Consensus 210 ~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~l 258 (317)
T 1hnj_A 210 NEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR---IISATAKKL 258 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHc
Confidence 3455556678888999999999999999999999998754 456788887
No 143
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=37.00 E-value=21 Score=33.85 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=16.5
Q ss_pred EEEEEcCccceEEEEEE-CCe--EEEE--eCCCCCcccceEEE
Q 010543 38 VIGIDLGTTYSCVGVYK-NGH--VEII--ANDQGNRITPSWVA 75 (507)
Q Consensus 38 viGID~GTt~s~va~~~-~g~--~~ii--~~~~g~~~~Ps~v~ 75 (507)
++|+|+|..|++++..+ +|. +..+ +.|.|....+..+.
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l~ 44 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVLK 44 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCCEEEEC----------------
T ss_pred eeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHHH
Confidence 79999999999999876 554 3332 56777555555543
No 144
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=36.73 E-value=15 Score=34.22 Aligned_cols=67 Identities=7% Similarity=-0.044 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhhh
Q 010543 339 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGG 410 (507)
Q Consensus 339 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a~ 410 (507)
..++++..+.+-..+ .... ..+++.|+|.||.+.. +.+.+++.+.. +......++.+.+.||++++.
T Consensus 211 ~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~-~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQ-TGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTT-TTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhc-CCcEEeecCCCHHHHHHHHHH
Confidence 344444444444444 2221 1156789999998765 66777776633 111122345678899998774
No 145
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=36.71 E-value=30 Score=31.86 Aligned_cols=21 Identities=14% Similarity=0.249 Sum_probs=18.7
Q ss_pred cEEEEEcCccceEEEEEE-CCe
Q 010543 37 TVIGIDLGTTYSCVGVYK-NGH 57 (507)
Q Consensus 37 ~viGID~GTt~s~va~~~-~g~ 57 (507)
..+.||+|+|+++.++++ ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 579999999999999998 664
No 146
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=34.03 E-value=34 Score=33.15 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=18.8
Q ss_pred CcEEEEEcCccceEEEEEECC
Q 010543 36 GTVIGIDLGTTYSCVGVYKNG 56 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~~g 56 (507)
+.++|||+|.|++++++.+.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 368999999999999999865
No 147
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=33.76 E-value=4.7 Score=37.68 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=31.9
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcc
Q 010543 172 IKDAVVTVPAYFNDAQRQATKDAGI-IAGL-NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGT 236 (507)
Q Consensus 172 ~~~~viTVP~~~~~~qr~~l~~aa~-~agl-~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt 236 (507)
+..+.+++|..- ......+++..+ ..++ ..+.+.++..||+++-. .....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~-----g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC-----GQKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT-----TTSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc-----CCCCcEEEEeCCCh
Confidence 345778888653 211123433333 3454 36789999999998652 12233444467666
No 148
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=33.59 E-value=82 Score=29.70 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=18.8
Q ss_pred CcEEEEEcCccceEEEEEE-CCe
Q 010543 36 GTVIGIDLGTTYSCVGVYK-NGH 57 (507)
Q Consensus 36 ~~viGID~GTt~s~va~~~-~g~ 57 (507)
.+++|||+|+|++++++.+ +|+
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~ 52 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGE 52 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC
T ss_pred cEEEEEEECCCEEEEEEECCCCc
Confidence 5899999999999999987 443
No 149
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=33.04 E-value=1e+02 Score=30.73 Aligned_cols=25 Identities=32% Similarity=0.664 Sum_probs=21.6
Q ss_pred CceeEEEEEcCCcceEEEEEEEeCC
Q 010543 223 GEKNILVFDLGGGTFDVSILTIDNG 247 (507)
Q Consensus 223 ~~~~~lv~D~Gggt~dvsv~~~~~~ 247 (507)
+...+|.+|+||.++-|..+++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 4568999999999999999999764
No 150
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=32.43 E-value=1.3e+02 Score=29.73 Aligned_cols=24 Identities=33% Similarity=0.621 Sum_probs=21.4
Q ss_pred CceeEEEEEcCCcceEEEEEEEeC
Q 010543 223 GEKNILVFDLGGGTFDVSILTIDN 246 (507)
Q Consensus 223 ~~~~~lv~D~Gggt~dvsv~~~~~ 246 (507)
+...++.+|+||.++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 456789999999999999999976
No 151
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=31.91 E-value=35 Score=31.77 Aligned_cols=43 Identities=30% Similarity=0.386 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCCHHHHHHHHhhcCCCCCCCCCCcchhhhhhHHHhh
Q 010543 364 DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQG 409 (507)
Q Consensus 364 ~~V~lvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~GAa~~a 409 (507)
..|.|+|........+..|+. + +.++. ..+++.++..|....+
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~-G~~~~-~~d~~~~~~~GL~~~~ 290 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-I-GREVS-AVAGDTAFQTGIRSIA 290 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-T-TCCEE-EEEHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCce-ecCHHHHHHHHHHHHH
Confidence 569999999888888888865 3 44432 3378888888866444
No 152
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=31.91 E-value=51 Score=30.81 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
++++-..+.+.+.++++|+++++++++|++|+.-+.+.+ +-+.+.+.|
T Consensus 213 ~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~---~~d~~~~~l 260 (322)
T 1ub7_A 213 EVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR---IIDAARERL 260 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHc
Confidence 344455677888999999999999999999999998754 455677777
No 153
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=31.25 E-value=48 Score=31.85 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=18.6
Q ss_pred CCcEEEEEcCccceEEEEEEC
Q 010543 35 LGTVIGIDLGTTYSCVGVYKN 55 (507)
Q Consensus 35 ~~~viGID~GTt~s~va~~~~ 55 (507)
++.++|||+|.|++.+++.+.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 568999999999999999864
No 154
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=30.74 E-value=55 Score=30.30 Aligned_cols=47 Identities=17% Similarity=0.270 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 337 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 337 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
..+...+.+.+.++++|+++++++++|++|++-|.+.++ -+.+.+.|
T Consensus 204 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~l 250 (309)
T 2ebd_A 204 LFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKL 250 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 334456677888999999999999999999999987653 45677777
No 155
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=28.56 E-value=1.7e+02 Score=28.98 Aligned_cols=29 Identities=28% Similarity=0.636 Sum_probs=24.0
Q ss_pred CceeEEEEEcCCcceEEEEEEEeCCeEEEE
Q 010543 223 GEKNILVFDLGGGTFDVSILTIDNGVFEVL 252 (507)
Q Consensus 223 ~~~~~lv~D~Gggt~dvsv~~~~~~~~~v~ 252 (507)
+...+|.+|+||.++-+.++++.++ +++.
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~ 85 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQIT 85 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEE
Confidence 4567999999999999999999766 4443
No 156
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=28.01 E-value=92 Score=26.32 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCH--HHHHHHHhhcCCCCCC
Q 010543 345 TMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIP--KVQQLLKDYFDGKEPN 392 (507)
Q Consensus 345 i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p--~l~~~l~~~~~~~~v~ 392 (507)
+.+.+++++++ .|.|+.+||.+--+ ..++.+.+.| ++++.
T Consensus 52 I~~~l~~a~~~-------~DlVittGG~g~~~~D~T~ea~a~~~-~~~l~ 93 (172)
T 3kbq_A 52 IGWAFRVALEV-------SDLVVSSGGLGPTFDDMTVEGFAKCI-GQDLR 93 (172)
T ss_dssp HHHHHHHHHHH-------CSEEEEESCCSSSTTCCHHHHHHHHH-TCCCE
T ss_pred HHHHHHHHHhc-------CCEEEEcCCCcCCcccchHHHHHHHc-CCCee
Confidence 34445555544 57899999998766 7899999999 55543
No 157
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=24.51 E-value=46 Score=32.04 Aligned_cols=18 Identities=17% Similarity=0.159 Sum_probs=14.6
Q ss_pred cCCceeEeechhhHHHHH
Q 010543 198 AGLNVARIINEPTAAAIA 215 (507)
Q Consensus 198 agl~~~~li~Ep~Aaa~~ 215 (507)
.++..+.+.++..|+|++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 355457899999999988
No 158
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=24.45 E-value=52 Score=30.94 Aligned_cols=47 Identities=13% Similarity=0.296 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 337 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 337 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
+++-..+.+.+.++++|+++++++++|++++.-+++.+ +-+.+.+.+
T Consensus 218 v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~---~~d~~~~~l 264 (331)
T 2x3e_A 218 VFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTR---ILAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHc
Confidence 34445667788899999999999999999999888754 445577776
No 159
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=24.07 E-value=56 Score=30.31 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 336 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 336 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
++.+...+.+.+.++++|+++++++++|++|++-+++.+ +-+.+.+.|
T Consensus 205 ~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~---~~d~~~~~l 252 (313)
T 1zow_A 205 EVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIR---IMESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 344455667888999999999999999999999988754 445566777
No 160
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=23.53 E-value=72 Score=32.50 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.5
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHHHHHcCCcee
Q 010543 172 IKDAVVTVPAYFNDAQRQATKDAGIIAGLNVA 203 (507)
Q Consensus 172 ~~~~viTVP~~~~~~qr~~l~~aa~~agl~~~ 203 (507)
-..+++.||..++.++-..+.+++...|+++.
T Consensus 128 ~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~ 159 (610)
T 2d0o_A 128 DAPYILVVSSAFDFADIASVINASLRAGYQIT 159 (610)
T ss_dssp TSEEEEEECTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCcEEEEECCcCCHHHHHHHHHHHHHCCCcEE
Confidence 35699999999999999999998888777543
No 161
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=23.43 E-value=49 Score=31.24 Aligned_cols=47 Identities=19% Similarity=0.216 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 337 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 337 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
+++-..+.+.+.++++|+++++++++|++|+.-+++.+ +-+.+.+.|
T Consensus 225 v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~l 271 (339)
T 1mzj_A 225 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLR---IIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---HHHHHHHHh
Confidence 34445677788899999999999999999999988754 445677777
No 162
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=23.36 E-value=1.5e+02 Score=27.32 Aligned_cols=27 Identities=44% Similarity=0.581 Sum_probs=21.5
Q ss_pred eeEEEEEcCCcceEEEEEEEeCCeEEE
Q 010543 225 KNILVFDLGGGTFDVSILTIDNGVFEV 251 (507)
Q Consensus 225 ~~~lv~D~Gggt~dvsv~~~~~~~~~v 251 (507)
..++.+|+|+..+.+.++......+..
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~ 32 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQK 32 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEE
Confidence 478999999999999999876554433
No 163
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=23.34 E-value=1.8e+02 Score=27.21 Aligned_cols=47 Identities=19% Similarity=0.106 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHHHHhhc
Q 010543 337 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 386 (507)
Q Consensus 337 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~l~~~~ 386 (507)
+++...+.+.+.++++|+++++++++|+++++..++.+ +-+.+.+.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~l 274 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 45566777888999999999999999999999888754 557777777
No 164
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=22.00 E-value=1.4e+02 Score=28.18 Aligned_cols=43 Identities=19% Similarity=0.160 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHHH
Q 010543 339 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQL 381 (507)
Q Consensus 339 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~~ 381 (507)
+...+.+...|+++|++++++.++++.|.++-|-...+.++--
T Consensus 50 ~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg 92 (334)
T 3eno_A 50 VHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVT 92 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHH
Confidence 4455677888999999999999999999999888777777644
No 165
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=21.81 E-value=2.3e+02 Score=26.24 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=33.9
Q ss_pred ceeEEEEEcCCcceEEEEEEEeCCeEEEEEEcCCCCCchHHHHHHHHHHHHHH
Q 010543 224 EKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKL 276 (507)
Q Consensus 224 ~~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~ 276 (507)
...++.+|+|+..+.+.++......+........ ..+...+-+.+.+.+.+.
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~-~~~~~~~~~~i~~~i~~~ 74 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTP-HTSYSAFLDAVCELVEEA 74 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-CSCHHHHHHHHHHHHHHH
T ss_pred CceEEEEEECCCEEEEEEEeCCCCEEEEEEecCC-CCCHHHHHHHHHHHHHHH
Confidence 3568999999999999999876554433333322 225566666666666543
No 166
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=21.54 E-value=1.2e+02 Score=29.63 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=49.2
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEeechhhH-HHHHhhcccCCC-------c-----------eeEEEEEc
Q 010543 172 IKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTA-AAIAYGLDKKGG-------E-----------KNILVFDL 232 (507)
Q Consensus 172 ~~~~viTVP~~~~~~qr~~l~~aa~~agl~~~~li~Ep~A-aa~~~~~~~~~~-------~-----------~~~lv~D~ 232 (507)
+.++|++.|.. ...---.+.-||..+|++.+.-+--..| ||++|+...-.+ + ...+-+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 45788888973 2222346788999999999988888877 577887654321 1 11256788
Q ss_pred CCcceEEEEEE
Q 010543 233 GGGTFDVSILT 243 (507)
Q Consensus 233 Gggt~dvsv~~ 243 (507)
=+|-+++.++-
T Consensus 239 ~AGPSEilViA 249 (423)
T 4gic_A 239 VAGPSEILVIS 249 (423)
T ss_dssp CCCCCEEEEEE
T ss_pred ccccceEEEEe
Confidence 88888887776
No 167
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=21.38 E-value=2.1e+02 Score=26.23 Aligned_cols=53 Identities=13% Similarity=0.104 Sum_probs=31.7
Q ss_pred eeEEEEEcCCcceEEEEEEEeCCeEEEEEEcC-CCCCchHHHHHHHHHHHHHHH
Q 010543 225 KNILVFDLGGGTFDVSILTIDNGVFEVLSTNG-DTHLGGEDFDQRVMEYFIKLI 277 (507)
Q Consensus 225 ~~~lv~D~Gggt~dvsv~~~~~~~~~v~~~~~-~~~~GG~~id~~l~~~l~~~~ 277 (507)
..++.+|+||..+.+.++..+...+....... ....+.+.+-+.+.+.+.+.+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~~~l~~~i~~~l 64 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAAF 64 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCCCcccCHHHHHHHHHHHHHHHH
Confidence 37899999999999999986544433322211 112344555555555554433
No 168
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=21.12 E-value=1.5e+02 Score=27.84 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCCCCHHHHH
Q 010543 338 NNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQ 380 (507)
Q Consensus 338 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~lvGG~s~~p~l~~ 380 (507)
-+...+.+...|+++|++++++.++++.|..+-|-...+.++-
T Consensus 44 ~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrv 86 (330)
T 2ivn_A 44 AEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRV 86 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHH
Confidence 3445567788899999999999999999998777666655543
No 169
>4f02_C Eukaryotic translation initiation factor 4 gamma; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens}
Probab=21.02 E-value=49 Score=17.78 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=12.8
Q ss_pred CCCCCchHHHHHHHHH
Q 010543 256 GDTHLGGEDFDQRVME 271 (507)
Q Consensus 256 ~~~~~GG~~id~~l~~ 271 (507)
.+++-||.++++.++.
T Consensus 6 rdpnqggkditeeims 21 (27)
T 4f02_C 6 RDPNQGGKDITEEIMS 21 (27)
T ss_pred cCccccchhhHHHHHh
Confidence 4678899999988764
No 170
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=20.66 E-value=51 Score=29.29 Aligned_cols=39 Identities=26% Similarity=0.408 Sum_probs=26.7
Q ss_pred HcCCceeEeechhhHHHHHhhcccCCCceeEEEEEcCCcceEEEEE
Q 010543 197 IAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSIL 242 (507)
Q Consensus 197 ~agl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lv~D~Gggt~dvsv~ 242 (507)
..|++ +.+.++..|+|++.... .+++++-+|.| +=.+++
T Consensus 90 ~~~~p-v~v~NDanaaalge~~~-----~~~~~l~~GtG-iG~gii 128 (226)
T 3lm2_A 90 AFGRP-VRIVNDALMQAIGSYNG-----GRMLFLGLGTG-LGAAMI 128 (226)
T ss_dssp HHTSC-EEEEEHHHHHHHHHCCS-----SEEEEEEESSS-EEEEEE
T ss_pred hcCCe-EEEEEHHHHHHHHHhhc-----CcEEEEEeCCc-eEEEEE
Confidence 44765 67899999999876432 46777877766 444444
No 171
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=20.59 E-value=70 Score=26.58 Aligned_cols=61 Identities=21% Similarity=0.316 Sum_probs=39.0
Q ss_pred CCcceEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCeEEEEcCCCCCHHHHHHHHhh
Q 010543 321 DGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDY 385 (507)
Q Consensus 321 ~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~V~lvGG~s~~p~l~~~l~~~ 385 (507)
++.+..+-|=..+|.+ .+.+.+.+-..+.|.+.+ ....+++ ++-|=|+-.+|+.-+.+.+.
T Consensus 9 ~~~~~ri~IV~arfn~---~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~ 70 (156)
T 3nq4_A 9 AAPDARVAITIARFNQ---FINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKS 70 (156)
T ss_dssp CCTTCCEEEEEESTTH---HHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCcH---HHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhc
Confidence 3344444444444432 344455555566777877 7666665 77799999999999888654
Done!