BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010544
(507 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1 OS=Arabidopsis thaliana
GN=SYNC1 PE=2 SV=1
Length = 572
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/493 (71%), Positives = 426/493 (86%), Gaps = 5/493 (1%)
Query: 1 MADNELP-VDQVATMDLNDDA--VQRHQFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVK 57
MAD +P Q+A + L +D VQR QFS+RVLI++IL RPDGGAGLAG+ VR+GGWVK
Sbjct: 1 MADEIVPPATQLAAVSLENDGSTVQRAQFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVK 60
Query: 58 TGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVPTGTCVYVEGMLKNPPEG--T 115
+GR+QGK +F+FL VNDGSCPANLQV+VD + D+ LV TGTCV V+G+LK PP+G T
Sbjct: 61 SGRDQGKRTFSFLAVNDGSCPANLQVMVDPSLYDVSNLVATGTCVTVDGVLKVPPKGKGT 120
Query: 116 KQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYA 175
+Q+IEL V KV+DVG VD +KYP+PKTKLTLE LRD + R RTN+I+AVARIRNALA+A
Sbjct: 121 QQQIELNVVKVIDVGTVDASKYPLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFA 180
Query: 176 THTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEADIEAA 235
TH+F Q+ FLYIHTPIITTSDCEGAGEMFQ TTLI+ ++LE++LI NPPP+EAD+EAA
Sbjct: 181 THSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAA 240
Query: 236 KLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDY 295
+L++ E+G VA+LK+ KA +EAI+A+V EL AKE A ++ERS+L+PG+P+KDG IDY
Sbjct: 241 RLIVIERGNVVAELKAAKASKEAITAAVAELKIAKETFAHIDERSRLRPGLPKKDGNIDY 300
Query: 296 TQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFS 355
++DFF RQAFLTVSGQLQVETYACA+SNVYTFGPTFRAE+SHTSRHLAEFWMVEPE+AF+
Sbjct: 301 SKDFFGRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFA 360
Query: 356 DLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTEAV 415
DL+DDMNCAEAYVK+MC+WLL+ C+ DME MAKN+D CI+RL++VASTPF RITYT+A+
Sbjct: 361 DLEDDMNCAEAYVKYMCNWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAI 420
Query: 416 ELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDL 475
ELLE AV +GK F+N VEWGIDLASEHERYLTEV FQKP+IVYNYPKGIKAFYMRLNDD
Sbjct: 421 ELLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDE 480
Query: 476 KTVAAMDVLVPKV 488
KTVAAMDVLVPKV
Sbjct: 481 KTVAAMDVLVPKV 493
>sp|Q9SSK1|SYNC3_ARATH Asparagine--tRNA ligase, cytoplasmic 3 OS=Arabidopsis thaliana
GN=SYNC3 PE=3 SV=1
Length = 571
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/488 (71%), Positives = 413/488 (84%), Gaps = 9/488 (1%)
Query: 7 PVDQVATMDLNDDA--VQRHQFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGK 64
P +Q+A +L +D VQ+ QFSDRVLI+SIL GGA LAG++VR+GGWVKTGR+QGK
Sbjct: 8 PANQLAADNLENDGSTVQKAQFSDRVLIRSIL---GGGAKLAGQKVRIGGWVKTGRQQGK 64
Query: 65 GSFAFLEVNDGSCPANLQVIVDKDVADLGQLVPTGTCVYVEGMLKNPPEGT--KQKIELR 122
G+FAFLEVNDGSCPANLQV+VD + DL +LV TGTCV V+G+LK PPEG KQ IEL
Sbjct: 65 GTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTCVTVDGVLKIPPEGKGLKQSIELS 124
Query: 123 VQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQK 182
V+ V+ VG VDP YP+PKTKLT EFLRD + R RTN I+AVARIRNALA+ATH+F Q+
Sbjct: 125 VETVIAVGTVDPTTYPLPKTKLTPEFLRDVLHLRSRTNLISAVARIRNALAFATHSFFQE 184
Query: 183 QGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEADIEAAKLVIKEK 242
FLYIHTPIITTSDCEGAGEMFQVTTLI+ +++E++LI NPPP+EAD+EAA+L++KE+
Sbjct: 185 HSFLYIHTPIITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAARLIVKER 244
Query: 243 GEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFAR 302
GEAVA+LK KA +E I+ASV +L+ AK +LA +EER +LKPG+P+ DGKIDY+ DFF R
Sbjct: 245 GEAVAQLKVAKASKEEITASVAQLSVAKASLAHVEERLRLKPGLPKNDGKIDYSNDFFGR 304
Query: 303 QAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMN 362
QAFLTVSGQLQVETYACA+S+VYTFGPTFRAE+SHTSRHLAEFWMVEPE+AF+D+ DDMN
Sbjct: 305 QAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIHDDMN 364
Query: 363 CAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTEAVELLEVAV 422
CAEAYVK+MC WL+D C DDME M KN D+ C RL MVA F+R+TYTEA+E LE AV
Sbjct: 365 CAEAYVKYMCKWLMDKCGDDMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERLEKAV 424
Query: 423 KEGK-HFENKVEWGIDLASEHERYLTEVKF-QKPVIVYNYPKGIKAFYMRLNDDLKTVAA 480
+GK F+NKVEWGIDLASEHERYLTEV+F QKP+IVYNYPKGIKAFYMRLNDD KTVAA
Sbjct: 425 AQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEKTVAA 484
Query: 481 MDVLVPKV 488
MDVLVPKV
Sbjct: 485 MDVLVPKV 492
>sp|Q9SW95|SYNC2_ARATH Asparagine--tRNA ligase, cytoplasmic 2 OS=Arabidopsis thaliana
GN=SYNC2 PE=2 SV=2
Length = 638
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 281/445 (63%), Gaps = 20/445 (4%)
Query: 67 FAFLEVNDGSCPANLQVIVDKDVADL--GQLVPTGTCVYVEGMLKNPPEGT-KQKIELRV 123
F FL ++DGS ++LQV+VD ++ + QL+ GTC+ EG+L+ P + K IEL
Sbjct: 140 FYFL-ISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHVIELEA 198
Query: 124 QKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQ 183
+K++ VG VDP KYP+ K +L L LRD FRPRT T+ +V R+ +AL A+HTFLQ
Sbjct: 199 EKLLHVGTVDPEKYPLSKKQLPLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTFLQYH 258
Query: 184 GFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEAD---IEAAKLVIK 240
GF Y+ P+ITT+ G GEMF+VTTL+ D E+ K PP E D I+ K VIK
Sbjct: 259 GFQYVQVPVITTT--TGFGEMFRVTTLLGKTDDKEE---KKPPVQEKDGFSIDTVKAVIK 313
Query: 241 EKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFF 300
EK + LK + RE + A+V +L K + +++E + K K G K K+D+++DFF
Sbjct: 314 EKTRLIDHLKRSDSNRETVVAAVHDLKKTNDLASQIEMKQKSKTGTLVKPEKLDFSKDFF 373
Query: 301 ARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDD 360
R +LT SG+ +E+YA A+ VYTFGP F A+ +RHLAE W VE EMAF++L D
Sbjct: 374 GRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAELDDA 433
Query: 361 MNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTEAVELLEV 420
M+CA+ Y KF+C ++L++ +DM+F++K DK+ RL AS+ R +YTE + LL+
Sbjct: 434 MDCADEYFKFLCKYVLENRDEDMKFISKRVDKTITTRLEATASSSLLRFSYTEVISLLQK 493
Query: 421 AVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAA 480
A FE K EWG+ L +EH YLT+ ++ PVIV+ YPK IK FY+RLNDD KTVAA
Sbjct: 494 ATT--TKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHTYPKAIKQFYVRLNDDKKTVAA 551
Query: 481 MDVLVPKVTCFF------KKFQALD 499
D++VPKV ++F+ LD
Sbjct: 552 FDLVVPKVGVVITGSQNEERFEILD 576
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 15 DLNDDAVQRHQFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGS 66
DL+ + ++S RV +K++L R D GAGLAG++V +GGWVK+ R K S
Sbjct: 15 DLSPKPITLSKYSKRVELKTLLDRSDRGAGLAGKRVVIGGWVKSARAVKKNS 66
>sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=SYNO PE=2 SV=3
Length = 567
Score = 358 bits (920), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/469 (42%), Positives = 275/469 (58%), Gaps = 72/469 (15%)
Query: 25 QFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVI 84
+F ++ I + D G G+ + + GWV+T R Q S F+E+NDGSC +NLQ +
Sbjct: 87 EFRKKLRIAEVKGGADEGLSRVGQSLNIMGWVRTLRSQS--SVTFIEINDGSCLSNLQCV 144
Query: 85 VDKDVADLGQL----VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIP 140
+ D Q+ + TG V V+G + +GTKQK+EL+V+K++ VG D + YPI
Sbjct: 145 MTSDAEGYDQVESGSILTGASVSVQGTIV-ASQGTKQKVELKVEKIIVVGECD-SSYPIQ 202
Query: 141 KTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEG 200
K +++ EFLR + RPRTNT AVAR+RN LAYATH F Q+ GF++
Sbjct: 203 KKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVW------------- 249
Query: 201 AGEMFQVTTLISDADKLEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAIS 260
+ +P + +D E A GE + E
Sbjct: 250 ---------------------VASPIITASDCEGA-------GEQFCVTTLIPSSHENTD 281
Query: 261 ASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACA 320
S+ + K K G ID++QDFF + AFLTVSGQL ETYA A
Sbjct: 282 TSIDAIPKTK-------------------GGLIDWSQDFFGKPAFLTVSGQLNGETYATA 322
Query: 321 VSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCF 380
+S+VYTFGPTFRAE+S+TSRHLAEFWM+EPE+AF+DL DDM CA AY++++ ++LD+C
Sbjct: 323 LSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCK 382
Query: 381 DDMEFMAKNYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLAS 440
+DMEF +K I RL VA F ++ YT+A+E+L +K K F+ V+WG+DL S
Sbjct: 383 EDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEIL---LKANKKFDFPVKWGLDLQS 439
Query: 441 EHERYLTEVKF-QKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
EHERY+TE F +PVI+ +YPK IKAFYMR NDD KTVAAMD+LVP++
Sbjct: 440 EHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRI 488
>sp|B3H198|SYN_ACTP7 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
7 (strain AP76) GN=asnS PE=3 SV=1
Length = 467
Score = 332 bits (850), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 258/452 (57%), Gaps = 81/452 (17%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q I++ D+A+ V
Sbjct: 13 GKVAVGEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQSIINNDLANYNDEVLRLTA 71
Query: 99 GTCVYVEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFR 156
G V V G ++++P EG Q +EL V VG V DP YP+ + ++E+LR+ R
Sbjct: 72 GCSVIVTGKVVESPAEG--QAVELHATHVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLR 129
Query: 157 PRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADK 216
PRTN I AVAR+R+ LA A H F +QGF ++ TP LI+ +D
Sbjct: 130 PRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATP------------------LITASD- 170
Query: 217 LEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKL 276
++ AG E S +L ENL +
Sbjct: 171 ----------------------------------TEGAG-EMFRVSTLDL----ENLPRT 191
Query: 277 EERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHS 336
EE GK+D++QDFF +++FLTVSGQL ETYACA+S VYTFGPTFRAE+S
Sbjct: 192 EE------------GKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENS 239
Query: 337 HTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCIN 396
+T+RHLAEFWMVEPE AF+ L D+ AE +K++ +L+ DDM+F AK+ DK I
Sbjct: 240 NTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDKDVIT 299
Query: 397 RLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVI 456
RL + PF ++ YT+A+E+L +K GK FE V WGIDL+SEHER+L E F+ PV+
Sbjct: 300 RLENFIAAPFAQVDYTDAIEIL---LKSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVV 356
Query: 457 VYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
V NYPK IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 357 VKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGI 388
>sp|A3N039|SYN_ACTP2 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
5b (strain L20) GN=asnS PE=3 SV=1
Length = 467
Score = 332 bits (850), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 258/452 (57%), Gaps = 81/452 (17%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q I++ D+A+ V
Sbjct: 13 GKVAVGEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQSIINNDLANYNDEVLRLTA 71
Query: 99 GTCVYVEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFR 156
G V V G ++++P EG Q +EL V VG V DP YP+ + ++E+LR+ R
Sbjct: 72 GCSVIVTGKVVESPAEG--QAVELHATHVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLR 129
Query: 157 PRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADK 216
PRTN I AVAR+R+ LA A H F +QGF ++ TP LI+ +D
Sbjct: 130 PRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATP------------------LITASD- 170
Query: 217 LEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKL 276
++ AG E S +L ENL +
Sbjct: 171 ----------------------------------TEGAG-EMFRVSTLDL----ENLPRT 191
Query: 277 EERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHS 336
EE GK+D++QDFF +++FLTVSGQL ETYACA+S VYTFGPTFRAE+S
Sbjct: 192 EE------------GKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENS 239
Query: 337 HTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCIN 396
+T+RHLAEFWMVEPE AF+ L D+ AE +K++ +L+ DDM+F AK+ DK I
Sbjct: 240 NTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDKDVIT 299
Query: 397 RLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVI 456
RL + PF ++ YT+A+E+L +K GK FE V WGIDL+SEHER+L E F+ PV+
Sbjct: 300 RLENFIAAPFAQVDYTDAIEIL---LKSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVV 356
Query: 457 VYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
V NYPK IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 357 VKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGI 388
>sp|Q7VLL7|SYN_HAEDU Asparagine--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=asnS PE=3 SV=1
Length = 467
Score = 328 bits (840), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 193/451 (42%), Positives = 255/451 (56%), Gaps = 79/451 (17%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G + G +V V GWV+T R K +FL V DGSC +QVI++ D+A+ +
Sbjct: 13 GKIVVGEKVTVRGWVRT-RRDSKAGLSFLTVYDGSCFEPIQVIINNDLANYQTEILRLTA 71
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P + Q +EL+ +V VG VD P YP+ + ++E+LR+ RP
Sbjct: 72 GCSVIVTGNIVESP-ASGQAVELQALEVEVVGWVDDPDTYPMAAKRHSIEYLREVAHLRP 130
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKL 217
RTN I AVAR+R+ LA A H F QGF ++ T LI+ +D
Sbjct: 131 RTNLIGAVARVRHCLAQAIHRFFNGQGFYWV------------------ATPLITASD-- 170
Query: 218 EKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLE 277
++ AG E S +L ENL + E
Sbjct: 171 ---------------------------------TEGAG-EMFRVSTLDL----ENLPRTE 192
Query: 278 ERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSH 337
GKIDY+QDFF ++AFLTVSGQL E+YACA+S VYTFGPTFRAE+S+
Sbjct: 193 H------------GKIDYSQDFFGKEAFLTVSGQLNGESYACALSKVYTFGPTFRAENSN 240
Query: 338 TSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINR 397
T+RHLAEFWMVEPE AF+ L D+ AE +K++ +L+ DDM+F AK+ DK I R
Sbjct: 241 TTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDKEVITR 300
Query: 398 LRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIV 457
L + PF ++ Y++A+E+L +K GK FE V WG+DL+SEHER+L E F+ PV+V
Sbjct: 301 LENFIAAPFAQVDYSDAIEIL---LKSGKKFEFPVAWGVDLSSEHERFLAEEHFKSPVVV 357
Query: 458 YNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
NYPK IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 358 KNYPKDIKAFYMRLNDDGKTVAAMDVLAPGI 388
>sp|Q7N622|SYN_PHOLL Asparagine--tRNA ligase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=asnS PE=3 SV=1
Length = 466
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/444 (42%), Positives = 246/444 (55%), Gaps = 79/444 (17%)
Query: 49 QVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVE 105
+V V GW++T R K +FL V DGSC LQ +V+ ++ + V TG V V
Sbjct: 19 EVTVRGWIRT-RRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQDEVLHLTTGCSVEVT 77
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAA 164
G + G Q EL+ K+V +G+V DP YP+ + ++E+LR+ RPRTN I A
Sbjct: 78 GTVV-ASLGQGQNFELQATKIVVIGLVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGA 136
Query: 165 VARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKN 224
VAR+R+ LA A H F + G+ ++ TP+IT +D EGAGEMF+V+TL
Sbjct: 137 VARMRHTLAQALHRFFHENGYFWVSTPLITAADTEGAGEMFRVSTL-------------- 182
Query: 225 PPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKP 284
+ L + +KGE D GREA
Sbjct: 183 --------DLQNLPLTDKGE--VDFNQDFFGREA-------------------------- 206
Query: 285 GIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
FLTVSGQL E YACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 207 --------------------FLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF++L D AE +K++ L DD++F A+ DK I RL ++
Sbjct: 247 FWMLEPEIAFANLNDAATLAENMLKYVFKAALAERADDLQFFAERVDKDVITRLEKFINS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F +I YT A+E+L+ G+ FEN V WG+DL+SEHERYL E FQ PV+V NYPK I
Sbjct: 307 DFAQIDYTSAIEILQNC---GQKFENPVFWGVDLSSEHERYLAEKHFQAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMR+NDD KTVAA+DVL P +
Sbjct: 364 KAFYMRMNDDGKTVAALDVLAPGI 387
>sp|B8F3Y5|SYN_HAEPS Asparagine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=asnS PE=3 SV=1
Length = 467
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 259/452 (57%), Gaps = 81/452 (17%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q I++ D+++ V
Sbjct: 13 GKVAVGEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDLSNYQDEVLRLTA 71
Query: 99 GTCVYVEGML-KNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFR 156
G V V G++ ++P EG Q +EL+ + V VG V DP YP+ + ++E+LR+ R
Sbjct: 72 GCSVIVTGVIVESPAEG--QAVELQAKSVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLR 129
Query: 157 PRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADK 216
PRTN I AVAR+R+ LA A H F +Q G + T LI+ +D
Sbjct: 130 PRTNLIGAVARVRHCLAQAIHRFFHEQ------------------GFYWVATPLITASD- 170
Query: 217 LEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKL 276
++ AG E S +L ENL +
Sbjct: 171 ----------------------------------TEGAG-EMFRVSTLDL----ENLPRG 191
Query: 277 EERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHS 336
E DGK+D++QDFF R++FLTVSGQL ETYACA+S VYTFGPTFRAE+S
Sbjct: 192 E------------DGKVDFSQDFFGRESFLTVSGQLNGETYACALSKVYTFGPTFRAENS 239
Query: 337 HTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCIN 396
+T+RHLAEFWMVEPE AF+ L D+ AE +K++ +L+ DD++F K+ D + I+
Sbjct: 240 NTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHIDNTVIS 299
Query: 397 RLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVI 456
RL ++ F +I YT+A+E+L +K GK+FE VEWGIDL+SEHER+L E F+ PV+
Sbjct: 300 RLENFINSDFAQIDYTDAIEVL---LKSGKNFEFPVEWGIDLSSEHERFLAEEYFKSPVV 356
Query: 457 VYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
V NYPK IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 357 VKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGI 388
>sp|Q6D453|SYN_ERWCT Asparagine--tRNA ligase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=asnS PE=3 SV=1
Length = 466
Score = 315 bits (808), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 250/444 (56%), Gaps = 79/444 (17%)
Query: 49 QVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVE 105
+V V GWV+T R K +F+ V DGSC LQ +V+ ++++ V TG V +
Sbjct: 19 EVTVRGWVRT-RRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVEIT 77
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRTNTIAA 164
G + P G Q EL+ V VG VD P YP+ + ++E+LR+ RPRTN I A
Sbjct: 78 GNVVASP-GEGQSFELQATNVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGA 136
Query: 165 VARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKN 224
VAR+R+ LA A H F + G+ ++ T LI+ +D
Sbjct: 137 VARVRHTLAQAIHRFFHENGYFWVS------------------TPLITASD--------- 169
Query: 225 PPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKP 284
++ AG E S ++ ENL + E+
Sbjct: 170 --------------------------TEGAG-EMFRVSTLDM----ENLPRTEQ------ 192
Query: 285 GIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
GK+D+++DFF ++AFLTVSGQL ETYACA+SNVYTFGPTFRAE+S+T+RHLAE
Sbjct: 193 ------GKVDFSKDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTARHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF+ L D AE +K++ +L+ DDM F A+ DK + RL S+
Sbjct: 247 FWMIEPEVAFASLDDVAALAENLLKYVFQAVLNERADDMAFFAERVDKEAVTRLEKFVSS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AVE+L + G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVEIL---LNCGQQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMR+NDD KTVAAMDVL P +
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGI 387
>sp|A5UF16|SYN_HAEIG Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=asnS PE=3 SV=1
Length = 467
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 254/447 (56%), Gaps = 81/447 (18%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V V GWV+T R K +FL V DGSC +Q I++ D+ + + TG V
Sbjct: 18 GETVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ L+ A H F +Q G + T LI+ +D
Sbjct: 135 IGAVARVRHCLSQAIHRFFHEQ------------------GFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRSE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
+GK+D++QDFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RH
Sbjct: 193 --------NGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMV 401
LAEFWMVEPE+AF+ L D+ AE +K++ +L DD++F K+ DK I RL
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENF 304
Query: 402 ASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYP 461
++ F +I YT+A+++L +K GK FE V WGIDL+SEHER+L E F+ PV+V NYP
Sbjct: 305 VNSDFAQIDYTDAIDVL---LKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYP 361
Query: 462 KGIKAFYMRLNDDLKTVAAMDVLVPKV 488
K IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 362 KDIKAFYMRLNDDGKTVAAMDVLAPGI 388
>sp|P43829|SYN_HAEIN Asparagine--tRNA ligase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=asnS PE=3 SV=2
Length = 467
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 254/447 (56%), Gaps = 81/447 (18%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V V GWV+T R K +FL V DGSC +Q I++ D+ + + TG V
Sbjct: 18 GETVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ L+ A H F +Q G + T LI+ +D
Sbjct: 135 IGAVARVRHCLSQAIHRFFHEQ------------------GFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRSE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
+GK+D++QDFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RH
Sbjct: 193 --------NGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMV 401
LAEFWMVEPE+AF+ L D+ AE +K++ +L DD++F K+ DK I RL
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENF 304
Query: 402 ASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYP 461
++ F +I YT+A+++L +K GK FE V WGIDL+SEHER+L E F+ PV+V NYP
Sbjct: 305 VNSDFAQIDYTDAIDVL---LKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYP 361
Query: 462 KGIKAFYMRLNDDLKTVAAMDVLVPKV 488
K IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 362 KDIKAFYMRLNDDEKTVAAMDVLAPGI 388
>sp|A5UCB9|SYN_HAEIE Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=asnS PE=3 SV=1
Length = 467
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/447 (41%), Positives = 254/447 (56%), Gaps = 81/447 (18%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V V GWV+T R K +FL V DGSC +Q I++ D+ + + TG V
Sbjct: 18 GETVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPSEG--QAVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AV+R+R+ L+ A H F +Q G + T LI+ +D
Sbjct: 135 IGAVSRVRHCLSQAIHRFFHEQ------------------GFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRSE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
+GK+D++QDFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RH
Sbjct: 193 --------NGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMV 401
LAEFWMVEPE+AF+ L D+ AE +K++ +L DD++F K+ DK I RL
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENF 304
Query: 402 ASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYP 461
++ F +I YT+A+++L +K GK FE V WGIDL+SEHER+L E F+ PV+V NYP
Sbjct: 305 VNSDFAQIDYTDAIDVL---LKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYP 361
Query: 462 KGIKAFYMRLNDDLKTVAAMDVLVPKV 488
K IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 362 KDIKAFYMRLNDDGKTVAAMDVLAPGI 388
>sp|Q2NU85|SYN_SODGM Asparagine--tRNA ligase OS=Sodalis glossinidius (strain morsitans)
GN=asnS PE=3 SV=1
Length = 466
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 248/447 (55%), Gaps = 79/447 (17%)
Query: 46 AGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCV 102
A ++ V GWV+T R K +FL V DGSC LQ +++ + + + +G V
Sbjct: 16 ADSEITVQGWVRT-RRDSKAGISFLAVYDGSCFDPLQAVINNTLPNYQNDILRLTSGCSV 74
Query: 103 YVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G + G Q+ E++ Q + +G VD P YP+ + ++E+LR+ RPRTN
Sbjct: 75 SVTGRVVESL-GGGQRYEIQAQAIEVLGWVDDPDTYPMAAKRHSVEYLREVAHLRPRTNL 133
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ LA A H F+ +QG F V+T
Sbjct: 134 IGAVARVRHTLAQAIHRFMDEQG-------------------FFWVST------------ 162
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
P + +D E A E S +L ENL
Sbjct: 163 ---PLITASDTEGAG--------------------EMFRVSTLDL----ENL-------- 187
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
P P DGK++Y +DFF ++AFLTVSGQL E+YACA+S +YTFGPTFRAE+S+TSRH
Sbjct: 188 --PRTP--DGKVNYDEDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRH 243
Query: 342 LAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMV 401
LAEFWM EPE+AF+ L D AEA +K++ +L DDM+F A+ DK INRL+
Sbjct: 244 LAEFWMAEPEVAFATLDDAAGLAEAMLKYVFQAVLTERADDMQFFAERIDKEAINRLKQF 303
Query: 402 ASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYP 461
S F ++ YT+AVE+L+ G+ FEN V WGIDL+SEHERYL E F+ PV+V NYP
Sbjct: 304 ISADFAQVDYTKAVEILQNC---GQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYP 360
Query: 462 KGIKAFYMRLNDDLKTVAAMDVLVPKV 488
K IKAFYMR+NDD KTVAAMDVL P +
Sbjct: 361 KDIKAFYMRMNDDGKTVAAMDVLAPGI 387
>sp|A4W8U9|SYN_ENT38 Asparagine--tRNA ligase OS=Enterobacter sp. (strain 638) GN=asnS
PE=3 SV=1
Length = 466
Score = 309 bits (792), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 246/445 (55%), Gaps = 79/445 (17%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYV 104
++V V GWV+T R K +FL V DGSC +Q +++ + + V TG V V
Sbjct: 18 QEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLTTGCSVIV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
G++ P G Q EL+ + G V DP YP+ + ++E+LR+ RPRTN I
Sbjct: 77 TGVVVASP-GQGQSFELQATAIEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNMIG 135
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIK 223
AVAR+R+ LA A H F +QG+ F V+T
Sbjct: 136 AVARVRHTLAQALHRFFDEQGY-------------------FWVST-------------- 162
Query: 224 NPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLK 283
P + +D E A E S +L ENL + E
Sbjct: 163 -PLITASDTEGAG--------------------EMFRVSTLDL----ENLPRTPE----- 192
Query: 284 PGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLA 343
GK+D+ +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLA
Sbjct: 193 -------GKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLA 245
Query: 344 EFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAS 403
EFWM+EPE+AF++L D AEA +K++ +L+ DDM+F A+ D + RL S
Sbjct: 246 EFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLEERADDMKFFAERVDSDAVARLERFVS 305
Query: 404 TPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKG 463
F ++ YT+AV +LE K G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK
Sbjct: 306 ADFAQVDYTDAVAILE---KCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKD 362
Query: 464 IKAFYMRLNDDLKTVAAMDVLVPKV 488
IKAFYMRLN+D KTVAAMDVL P +
Sbjct: 363 IKAFYMRLNEDGKTVAAMDVLAPGI 387
>sp|A9NE58|SYN_ACHLI Asparagine--tRNA ligase OS=Acholeplasma laidlawii (strain PG-8A)
GN=asnS PE=3 SV=1
Length = 463
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 252/458 (55%), Gaps = 83/458 (18%)
Query: 32 IKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVA- 90
I++I P A AG++V + GW++ R+Q + F F+ +NDGS N+QV+ ++
Sbjct: 5 IRTIYKDP---ARYAGQEVILKGWIRNHRDQKE--FGFINLNDGSFFENIQVVYERATTK 59
Query: 91 --DLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEF 148
D + G + V G L P+ + Q E++ +V +G YPI + T EF
Sbjct: 60 DFDAVTRLSVGASIEVIGTLVLTPDRS-QPFEIKALEVRLIGD-SGENYPIQPKRHTREF 117
Query: 149 LRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVT 208
LR+ RPRTN +AV R+R+ AYA H F Q+Q F+Y+HTPI+T +D EGAG MF+VT
Sbjct: 118 LREVAHLRPRTNLFSAVFRVRSIAAYAIHKFFQEQDFVYVHTPILTANDGEGAGAMFKVT 177
Query: 209 TLISDADKLEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTK 268
TL ++ K P ++ I+ +K D GREA
Sbjct: 178 TL---------DMNKPPRNEDSSIDYSK---------------DFFGREA---------- 203
Query: 269 AKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
NL TV+GQL+ E YA A N+YTFG
Sbjct: 204 ---NL---------------------------------TVTGQLEGEAYAHAFRNIYTFG 227
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAK 388
PTFRAE+S+T+ H +EFWM+EPE+AF+DL D+M E VK++ ++L+H ++M F K
Sbjct: 228 PTFRAENSNTTTHASEFWMIEPEIAFADLNDNMELIERMVKYVTSYVLEHAKEEMAFFDK 287
Query: 389 NYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTE 448
+K + +L + + F+RIT+ EA+ +L +K FEN+ + G DLA EHERYLTE
Sbjct: 288 FVEKGLLTKLDNLLKSSFKRITHEEAINIL---LKSNHKFENQPKHGEDLAKEHERYLTE 344
Query: 449 VKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVP 486
F PV V ++PK IKAFYMRLNDD KTVAA+D+LVP
Sbjct: 345 KAFHGPVFVKDWPKDIKAFYMRLNDDQKTVAAVDLLVP 382
>sp|A0KIC3|SYN_AERHH Asparagine--tRNA ligase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=asnS PE=3 SV=1
Length = 466
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 241/451 (53%), Gaps = 89/451 (19%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V GW++T R K +FL ++DGSC +Q +V +A+ V T V
Sbjct: 17 GTTQTVKGWIRT-RRDSKAGISFLAISDGSCFHPVQAVVPNTLANYENEVLRLTTACSVE 75
Query: 104 VEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTI 162
V G++ +G+ Q EL+ +V VG V DP YP+ + ++E
Sbjct: 76 VTGVVA-ASQGSGQAFELQATEVKVVGWVEDPDTYPMAAKRHSIE--------------- 119
Query: 163 AAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA-DKLEKE- 220
+L++QG L T ++ G + +V +S A + E
Sbjct: 120 ----------------YLREQGHLRARTNMV--------GAVTRVRNCLSQAIHRFFHEQ 155
Query: 221 ---LIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLE 277
I P + +D E A E S ++ ENL
Sbjct: 156 GYLWIAAPLITASDTEGAG--------------------EMFRVSTLDM----ENL---- 187
Query: 278 ERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSH 337
P P GK+DY +DFF ++ FLTVSGQL VETYACA+S VYTFGPTFRAE+S+
Sbjct: 188 ------PRTPA--GKVDYDKDFFGKETFLTVSGQLNVETYACALSKVYTFGPTFRAENSN 239
Query: 338 TSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINR 397
TSRHLAEFWMVEPE+AF+DL+D+ AEA +K++ + +L DD+EF A++ DK I R
Sbjct: 240 TSRHLAEFWMVEPEVAFADLEDNAALAEAMLKYVFNAVLAERRDDLEFFAQHVDKDAIGR 299
Query: 398 LRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIV 457
L ++ F +I YT+A+E+L+ GK FE V WGIDL+SEHERYL E F+ PV+V
Sbjct: 300 LERFVASDFAQIDYTDAIEVLKNC---GKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVV 356
Query: 458 YNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
NYPK IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 357 KNYPKDIKAFYMRLNDDGKTVAAMDVLAPGI 387
>sp|Q7VR09|SYN_BLOFL Asparagine--tRNA ligase OS=Blochmannia floridanus GN=asnS PE=3 SV=1
Length = 470
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 237/450 (52%), Gaps = 80/450 (17%)
Query: 45 LAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV----ADLGQLVPTGT 100
L ++ + GW++T R K FL + DGSC +LQ++V ++ D+ +L TG
Sbjct: 16 LQNTEITLYGWIRT-RRHSKTKITFLNLYDGSCLESLQIVVKNNLHNYETDILKLT-TGC 73
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRT 159
+ +G + N GTKQ+IEL + +G +D P+ YPI K ++E+LR+ RPRT
Sbjct: 74 SIIAKGYITNSL-GTKQRIELIATYIQVLGWIDNPSTYPITTKKHSMEYLRNVAHLRPRT 132
Query: 160 NTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEK 219
I A++ H Q IH + T K
Sbjct: 133 -------HIFGAISRIRHVLFQS-----IHNLMNT------------------------K 156
Query: 220 ELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEER 279
I P P I+AS TE +++L
Sbjct: 157 GFIWVPTP------------------------------IITASDTEGNSKMFYVSELLNN 186
Query: 280 SKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTS 339
SK I KI + FF ++AFLTVSGQL VE+YACA++ VYTFGPTFRAEHS+T+
Sbjct: 187 SKKSQNICNSHQKIP--ELFFGKEAFLTVSGQLNVESYACALTKVYTFGPTFRAEHSNTN 244
Query: 340 RHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNY-DKSCINRL 398
RHLAEFWM+EPEMAF+DL + A++ +K + +L+ C +D+E+ A + + + I RL
Sbjct: 245 RHLAEFWMLEPEMAFTDLNIIIKIADSLLKDIVQTILEQCINDIEYCASHIKEYNLIKRL 304
Query: 399 RMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVY 458
+ I YT+A++LL K F N + WG+DL SEHE+YL+E FQ P+++
Sbjct: 305 ENFLHSKIIHIEYTDAIKLLSSC---DKTFNNTIYWGMDLFSEHEKYLSEEYFQSPIVIK 361
Query: 459 NYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
N+PK IKAFYMRLNDD KTV++MD+LVP +
Sbjct: 362 NHPKNIKAFYMRLNDDNKTVSSMDILVPGI 391
>sp|A5HZE1|SYN_CLOBH Asparagine--tRNA ligase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=asnS PE=3 SV=1
Length = 463
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/448 (38%), Positives = 240/448 (53%), Gaps = 89/448 (19%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVE 105
++V++ GWV+T R+ +FAF+EVNDGS N+QVI++ + + +L +P T V VE
Sbjct: 19 KEVKINGWVRTVRDSK--NFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVE 76
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAV 165
G+++ P P K E RI +++T +
Sbjct: 77 GIVQ----------------------------PTPNAKQPFEIKATRISIEGKSSTDYPL 108
Query: 166 ARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA-DKLEKE---- 220
+ R HTF Y+ T +F+V +L + A K +E
Sbjct: 109 QKKR-------HTFE------YLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFV 155
Query: 221 LIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERS 280
P + +D E A E + +L N+ K EE
Sbjct: 156 YTNTPIITGSDCEGAG--------------------EMFQLTTMDLN----NIPKTEE-- 189
Query: 281 KLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSR 340
GKID+++DFF A LTVSGQL ET+A A NVYTFGPTFRAE+S+T+R
Sbjct: 190 ----------GKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTAR 239
Query: 341 HLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRM 400
H +EFWM+EPEMAF++L D ++ AE VKF+ ++++++ ++M F DK +RL
Sbjct: 240 HASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDN 299
Query: 401 VASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNY 460
V ++ F+RITYTEAVELL+ K G F+ +VEWGIDL +EHERYLTE F+KPV V +Y
Sbjct: 300 VVNSDFKRITYTEAVELLQ---KSGVKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDY 356
Query: 461 PKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
PK IKAFYMRLNDD KTVAA D+LVP V
Sbjct: 357 PKDIKAFYMRLNDDGKTVAAADLLVPGV 384
>sp|A7FRK8|SYN_CLOB1 Asparagine--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=asnS PE=3 SV=1
Length = 463
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/448 (38%), Positives = 240/448 (53%), Gaps = 89/448 (19%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVE 105
++V++ GWV+T R+ +FAF+EVNDGS N+QVI++ + + +L +P T V VE
Sbjct: 19 KEVKINGWVRTVRDSK--NFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVE 76
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAV 165
G+++ P P K E RI +++T +
Sbjct: 77 GIVQ----------------------------PTPNAKQPFEIKATRISIEGKSSTDYPL 108
Query: 166 ARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA-DKLEKE---- 220
+ R HTF Y+ T +F+V +L + A K +E
Sbjct: 109 QKKR-------HTFE------YLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFV 155
Query: 221 LIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERS 280
P + +D E A E + +L N+ K EE
Sbjct: 156 YTNTPIITGSDCEGAG--------------------EMFQLTTMDLN----NIPKTEE-- 189
Query: 281 KLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSR 340
GKID+++DFF A LTVSGQL ET+A A NVYTFGPTFRAE+S+T+R
Sbjct: 190 ----------GKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTAR 239
Query: 341 HLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRM 400
H +EFWM+EPEMAF++L D ++ AE VKF+ ++++++ ++M F DK +RL
Sbjct: 240 HASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDN 299
Query: 401 VASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNY 460
V ++ F+RITYTEAVELL+ K G F+ +VEWGIDL +EHERYLTE F+KPV V +Y
Sbjct: 300 VVNSDFKRITYTEAVELLQ---KSGVKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDY 356
Query: 461 PKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
PK IKAFYMRLNDD KTVAA D+LVP V
Sbjct: 357 PKDIKAFYMRLNDDGKTVAAADLLVPGV 384
>sp|Q6MEC9|SYN_PARUW Asparagine--tRNA ligase OS=Protochlamydia amoebophila (strain
UWE25) GN=asnS PE=3 SV=1
Length = 467
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 165/220 (75%), Gaps = 5/220 (2%)
Query: 271 ENLAKLEERSKLKPGIPQK--DGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
E K+ + + L P + +G++DYTQDFF + +LTVSGQL E YACA+S+VYTFG
Sbjct: 172 EGAGKMFQVTTLDQNNPARTPEGRVDYTQDFFGKPTYLTVSGQLNGEIYACALSDVYTFG 231
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAK 388
PTFRAE+S+TSRHLAEFWM+EPEMAF+DL D+M+CAE Y+K++ ++LD+C +DMEF K
Sbjct: 232 PTFRAENSNTSRHLAEFWMIEPEMAFADLNDNMDCAEDYLKYILKYVLDNCQEDMEFFNK 291
Query: 389 NYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTE 448
+ I+RL V +T FER +YT AV +LE K K FE V+WG+DL SEHER+L E
Sbjct: 292 HVATDLISRLEHVINTSFERASYTYAVRILE---KADKKFEYPVKWGLDLQSEHERFLAE 348
Query: 449 VKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
F KPVI+ +YPK IKAFYMR N+D KTVAAMDVLVPKV
Sbjct: 349 EFFGKPVILTDYPKDIKAFYMRTNEDNKTVAAMDVLVPKV 388
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 114/185 (61%), Gaps = 6/185 (3%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
R IKS+ L G + + GWV+T R Q +F F+E+NDGS +N Q+I D
Sbjct: 2 RTKIKSLRGTTPEVRALIGHDITLKGWVRTVRNQK--TFTFIEINDGSTLSNFQIIATPD 59
Query: 89 VADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
+A QL+ TG V G + P G +Q +E++ + +G DP Y + K + T
Sbjct: 60 IAGYDQLINQLSTGVSVSAIGTIVESP-GKEQNLEMQATAITIIGKCDPEVYLLQKKRHT 118
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
EFLR RPRTNTI AV R+RNALA+ATH F QK+GFLYIHTPIIT SDCEGAG+MF
Sbjct: 119 FEFLRSIAHLRPRTNTIGAVTRVRNALAFATHQFFQKRGFLYIHTPIITGSDCEGAGKMF 178
Query: 206 QVTTL 210
QVTTL
Sbjct: 179 QVTTL 183
>sp|A7GB01|SYN_CLOBL Asparagine--tRNA ligase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=asnS PE=3 SV=1
Length = 463
Score = 261 bits (668), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 177/468 (37%), Positives = 245/468 (52%), Gaps = 92/468 (19%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
D L+KS+ + ++V++ GWV+T R+ +FAF+EVNDGS N+QVI++
Sbjct: 2 DITLVKSLYREAEK---YMDKEVKINGWVRTVRDSK--NFAFVEVNDGSFFKNVQVILES 56
Query: 88 DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
+ + +L +P T V V EG Q P P K
Sbjct: 57 SLENFKELCKMPISTSVEV--------EGIIQ--------------------PTPNAKQP 88
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
E R+ +++T + + R HTF Y+ T +F
Sbjct: 89 FEIKATRVSIEGKSSTDYPLQKKR-------HTFE------YLRTIAHLRPRSNAFSAVF 135
Query: 206 QVTTLISDA-DKLEKE----LIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAIS 260
+V +L + A K +E P + +D E A E
Sbjct: 136 RVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAG--------------------EMFQ 175
Query: 261 ASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACA 320
+ +L N+ K EE GKID+++DFF A LTVSGQL ET+A A
Sbjct: 176 LTTMDLN----NIPKTEE------------GKIDFSKDFFGSPANLTVSGQLSAETFALA 219
Query: 321 VSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCF 380
NVYTFGPTFRAE+S+T+RH +EFWM+EPEMAF++L D ++ AE VKF+ ++++++
Sbjct: 220 FRNVYTFGPTFRAENSNTARHASEFWMIEPEMAFAELTDYLDNAENMVKFVINYVMENAP 279
Query: 381 DDMEFMAKNYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLAS 440
++M F DK +RL V ++ F+RITYTEAVELL+ K G F+ +VEWGIDL +
Sbjct: 280 EEMAFFNSFVDKGLFDRLDNVVNSDFKRITYTEAVELLQ---KSGGKFDYEVEWGIDLQT 336
Query: 441 EHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
EHERYLTE F+KPV V +YPK IKAFYMRLNDD KTVAA D+LVP V
Sbjct: 337 EHERYLTEQIFKKPVFVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGV 384
>sp|Q8DG51|SYN_THEEB Asparagine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=asnS PE=3 SV=1
Length = 462
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 154/199 (77%), Gaps = 3/199 (1%)
Query: 290 DGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVE 349
+GKID++QDFF R+A+LTVSGQL+ E A A +NVYTFGPTFRAE+S+TSRHLAEFWMVE
Sbjct: 188 EGKIDFSQDFFGRRAYLTVSGQLEAEIMATAFTNVYTFGPTFRAENSNTSRHLAEFWMVE 247
Query: 350 PEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERI 409
PEMAF DL+ DM AEA+++F+ ++LDHC +DM F + D S + +A+ PF +
Sbjct: 248 PEMAFCDLRGDMELAEAFLQFVFRYVLDHCPEDMAFFQERIDHSVMATAEQMATQPFAHL 307
Query: 410 TYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYM 469
+Y+EA+++LE K G+ FE V WG+DL SEHERYL E Q+PVIVY+YP IKAFYM
Sbjct: 308 SYSEAIQVLE---KSGRAFEFPVAWGLDLQSEHERYLAEEYCQRPVIVYDYPAAIKAFYM 364
Query: 470 RLNDDLKTVAAMDVLVPKV 488
RLNDD KTVAAMD+L PK+
Sbjct: 365 RLNDDGKTVAAMDILAPKI 383
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 107/182 (58%), Gaps = 11/182 (6%)
Query: 32 IKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVAD 91
IK IL + G G ++ V GWV+T RE + +F + +NDGS A LQV++ VA
Sbjct: 5 IKDILHQ-----GQVGDRITVKGWVRTKRELKECTF--VNLNDGSTLAGLQVVIPNTVAA 57
Query: 92 LGQL---VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEF 148
+ TG G L P G Q IEL +++ G DP YP+ K + + EF
Sbjct: 58 ATPTMKDLTTGAAAEFTGELVRSP-GKNQAIELHAEEIHLWGTADPETYPLQKKRHSFEF 116
Query: 149 LRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVT 208
LR RPRTNT+ AV R+RNA A A H F Q++GFL++HTPIIT SDCEGAGE+F VT
Sbjct: 117 LRTIAHLRPRTNTLGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGELFTVT 176
Query: 209 TL 210
TL
Sbjct: 177 TL 178
>sp|A8GCJ5|SYN_SERP5 Asparagine--tRNA ligase OS=Serratia proteamaculans (strain 568)
GN=asnS PE=3 SV=1
Length = 466
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G +D++QDFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF+DL+D AE +K++ +L+ DDM+F A+ DK I+RL+ ++
Sbjct: 247 FWMIEPEVAFADLEDIAELAEKMLKYVFQAVLNERMDDMQFFAERVDKDAIDRLQRFVTS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YTEAVE+L + G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTEAVEIL---IASGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMR+NDD KTVAAMDVL P +
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGI 387
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G +V V GWV+T R K +FL V DGSC LQ +V+ + + V T
Sbjct: 12 GRAAVDSEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYQDEVLHLTT 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G + V G++ P G Q EL+ + VG VD P YP+ + ++E+LR+ RP
Sbjct: 71 GCSIEVTGVVVASP-GEGQSFELQATAIKVVGWVDDPDTYPMAAKRHSIEYLREVAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+R+ LA A H F + GF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 130 RTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|A6VNV7|SYN_ACTSZ Asparagine--tRNA ligase OS=Actinobacillus succinogenes (strain ATCC
55618 / 130Z) GN=asnS PE=3 SV=1
Length = 467
Score = 256 bits (653), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 152/198 (76%), Gaps = 3/198 (1%)
Query: 291 GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEP 350
G +D+ QDFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RHLAEFWMVEP
Sbjct: 194 GTVDFNQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFWMVEP 253
Query: 351 EMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERIT 410
E+AF+ L D+ AE +K++ + +L DD+EF +K+ DK I RL ++PF +I
Sbjct: 254 EIAFATLADNAKLAEDMLKYVFNAVLTERRDDLEFFSKHVDKDVITRLEHFVNSPFAQID 313
Query: 411 YTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR 470
YT+A+++L VK GK FE V WGIDL+SEHERYL E F+ PV+V NYPKGIKAFYMR
Sbjct: 314 YTDAIDVL---VKSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKGIKAFYMR 370
Query: 471 LNDDLKTVAAMDVLVPKV 488
LNDD KTVAAMDVL P +
Sbjct: 371 LNDDGKTVAAMDVLAPGI 388
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 105/169 (62%), Gaps = 8/169 (4%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G +V V GWV+T R K +FL V DGSC +Q I++ D+ + V G V
Sbjct: 18 GEKVTVRGWVRT-RRDSKAGLSFLTVYDGSCFNPIQAIINNDIVNYESEVLRLTAGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P +G Q +EL+ + V VG V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGTVVESPAQG--QAVELQTETVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 135 IGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTL 183
>sp|Q7MVE5|SYN_PORGI Asparagine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=asnS PE=3 SV=1
Length = 469
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Query: 271 ENLAKLEERSKLKP-GIPQ-KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
E ++ + + L P +P+ ++G++DY +DFF R LTVSGQL+ E A A+ +YTFG
Sbjct: 171 EGAGQMFQVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFG 230
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAK 388
PTFRAE+S+T RHLAEFWM+EPE+AF +++D+M+ AE ++K+ W LD+C DD+ F+++
Sbjct: 231 PTFRAENSNTPRHLAEFWMIEPEVAFLEIEDNMDLAEEFIKYCVQWALDNCMDDISFLSE 290
Query: 389 NYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTE 448
++DK I+RL+ V PF R+ YTE + +LE AVK G FE + WG DLASEHERYL E
Sbjct: 291 HFDKELIDRLKFVLEKPFVRLAYTEGIRILEEAVKNGVKFEFPIYWGADLASEHERYLVE 350
Query: 449 VKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
V F+ PVI+ +YPK IK+FYM+LNDD KTV MDVL PK+
Sbjct: 351 VHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKI 390
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 43 AGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGT 100
GL G+++ + GWV+T R G + F+ +NDGS N+Q++ D D Q+ + TG
Sbjct: 16 GGLVGQEINIKGWVRTKR--GNKAVNFIALNDGSTIHNMQIVADLASFDAAQMSQITTGA 73
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTN 160
C+ V G L +G Q +E++ + G DPA YP+ K TLEFLR+ RPRTN
Sbjct: 74 CIGVIGTLVES-QGAGQSVEVQASAIEIYGTADPATYPLQKKGHTLEFLREIAHLRPRTN 132
Query: 161 TIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA 214
T A+ RIR+ +A A HTF +G+ Y H P+IT SDCEGAG+MFQVTTL D+
Sbjct: 133 TFGAIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMFQVTTLNPDS 186
>sp|B2RK42|SYN_PORG3 Asparagine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
33277 / DSM 20709 / JCM 12257) GN=asnS PE=3 SV=1
Length = 469
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Query: 271 ENLAKLEERSKLKP-GIPQ-KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
E ++ + + L P +P+ ++G++DY +DFF R LTVSGQL+ E A A+ +YTFG
Sbjct: 171 EGAGQMFQVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFG 230
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAK 388
PTFRAE+S+T RHLAEFWM+EPE+AF +++D+M+ AE ++K+ W LD+C DD+ F+++
Sbjct: 231 PTFRAENSNTPRHLAEFWMIEPEVAFLEIEDNMDLAEEFIKYCVQWALDNCMDDISFLSE 290
Query: 389 NYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTE 448
++DK I+RL+ V PF R+ YTE + +LE AVK G FE + WG DLASEHERYL E
Sbjct: 291 HFDKELIDRLKFVLEKPFVRLAYTEGIRILEEAVKNGVKFEFPIYWGADLASEHERYLVE 350
Query: 449 VKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
V F+ PVI+ +YPK IK+FYM+LNDD KTV MDVL PK+
Sbjct: 351 VHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKI 390
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
Query: 43 AGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGT 100
GL G+++ + GWV+T R G + F+ +NDGS N+Q++ D D Q+ + TG
Sbjct: 16 GGLVGQEINIKGWVRTKR--GNKAVNFIALNDGSTIHNMQIVADLASFDAAQMSQITTGA 73
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTN 160
C+ V G L +G Q +E++ + G DPA YP+ K TLEFLR+ RPRTN
Sbjct: 74 CIGVIGTLVES-QGAGQSVEVQASAIEIYGTADPATYPLQKKGHTLEFLREIAHLRPRTN 132
Query: 161 TIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA 214
T + RIR+ +A A HTF +G+ Y H P+IT SDCEGAG+MFQVTTL D+
Sbjct: 133 TFGVIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMFQVTTLNPDS 186
>sp|A1S684|SYN_SHEAM Asparagine--tRNA ligase OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=asnS PE=3 SV=1
Length = 466
Score = 254 bits (650), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D GK+DY QDFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDAGKVDYDQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF+DL D AE+ +K+ + +L DDM+F A+ D S I+RL+ S+
Sbjct: 247 FWMVEPEVAFADLNDIAGLAESMLKYCFNAVLQERMDDMKFFAERVDGSVIDRLQSFVSS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AVE+L+ GK FE VEWGIDL SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVEILQNC---GKTFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 364 KAFYMRLNEDGKTVAAMDVLAPGI 387
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 98/168 (58%), Gaps = 6/168 (3%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G ++ V GWV+T R K +FL V DGSC +Q +V +++ V G V
Sbjct: 17 GTEITVRGWVRT-RRDSKAGISFLAVYDGSCFDAIQGVVPNALSNYNDEVLKLTAGCSVE 75
Query: 104 VEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRTNTI 162
+ G L P G+ Q EL+ V G VD P YP+ + ++E LRD RPRTN I
Sbjct: 76 MTGNLVESP-GSGQAFELQATAVKVTGWVDDPDTYPMAAKRHSIEHLRDVAHLRPRTNII 134
Query: 163 AAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AVAR+RN L+ A H F + GF+++ TPIIT SDCEGAGEMF+V+TL
Sbjct: 135 GAVARVRNCLSQAIHRFYHENGFIWVSTPIITASDCEGAGEMFRVSTL 182
>sp|B0BNV4|SYN_ACTPJ Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
3 (strain JL03) GN=asnS PE=3 SV=1
Length = 467
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 167/231 (72%), Gaps = 9/231 (3%)
Query: 259 ISASVTELTKAKENLAKLEERSKLKPGIPQKD-GKIDYTQDFFARQAFLTVSGQLQVETY 317
I+AS TE ++ L+ S +P+ D GK+D++QDFF +++FLTVSGQL ETY
Sbjct: 166 ITASDTEGAGEMFRVSTLDLES-----LPRTDEGKVDFSQDFFGKESFLTVSGQLNGETY 220
Query: 318 ACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLD 377
ACA+S VYTFGPTFRAE+S+T+RHLAEFWMVEPE AF+ L D+ AE +K++ +L+
Sbjct: 221 ACALSKVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLE 280
Query: 378 HCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTEAVELLEVAVKEGKHFENKVEWGID 437
DDM+F AK+ DK I RL ++PF ++ YT+A+E+L +K GK FE V WGID
Sbjct: 281 ERKDDMQFFAKHIDKDVITRLENFIASPFAQVDYTDAIEIL---LKSGKEFEFPVSWGID 337
Query: 438 LASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKV 488
L+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +
Sbjct: 338 LSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGI 388
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 104/169 (61%), Gaps = 8/169 (4%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G +V V GWV+T R K +FL V DGSC LQ I++ D+A+ V G V
Sbjct: 18 GEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPLQSIINNDLANYNDEVLRLTAGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL V VG V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELHATHVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNL 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 135 IGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTL 183
>sp|A8FVU8|SYN_SHESH Asparagine--tRNA ligase OS=Shewanella sediminis (strain HAW-EB3)
GN=asnS PE=3 SV=1
Length = 466
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D GK+DY++DFF +++FLTVSGQL ETYA A+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRNDEGKVDYSEDFFGKESFLTVSGQLNAETYASALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF+DL D AE +KF +L+ DD+EF A+ DK+ I+RL S+
Sbjct: 247 FWMVEPEVAFADLDDVAGLAEQMLKFCFKAVLEERRDDLEFFAQRVDKTVIDRLESFVSS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AVE+L+ GK FE VEWGIDL SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVEILKSC---GKKFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLNDD KTVAAMDVL P +
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGI 387
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G QV V GWV++ R K +FL V DGSC +Q +V + + + G V
Sbjct: 17 GSQVTVRGWVRS-RRDSKAGISFLAVYDGSCFDPIQGVVPNSLENYNDEILKLTAGCSVV 75
Query: 104 VEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTI 162
+ G + + P G Q EL+V V G V DP YP+ + ++E LR+ RPRTN I
Sbjct: 76 MTGEVVDSP-GKGQAFELQVSSVEVAGWVEDPDTYPMAAKRHSIEHLRELAHLRPRTNII 134
Query: 163 AAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AVAR+RN+L+ A H F +QGF+++ TP+IT SD EGAGEMF+V+TL
Sbjct: 135 GAVARVRNSLSQAIHRFYHEQGFIWVSTPLITASDAEGAGEMFRVSTL 182
>sp|Q57QZ8|SYN_SALCH Asparagine--tRNA ligase OS=Salmonella choleraesuis (strain SC-B67)
GN=asnS PE=3 SV=1
Length = 466
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 158/204 (77%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G++D+ +DFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF+DL+D+ AEA +K++ + +L+ DDM+F A+ DK I RL ST
Sbjct: 247 FWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVST 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YTEAV +LE + GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTEAVAILE---RCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 364 KAFYMRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYV 104
++V V GWV+T R K +FL V DGSC +Q +++ + + + V TG V V
Sbjct: 18 QEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I
Sbjct: 77 TGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIG 135
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 136 AVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|Q11Q97|SYN_CYTH3 Asparagine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469) GN=asnS PE=3 SV=1
Length = 464
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 157/207 (75%), Gaps = 3/207 (1%)
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
LK K+G++D+T+DFF + LTVSGQL+ E A A+ VYTFGPTFRAE+S+T+RH
Sbjct: 182 LKNPSKTKEGEVDFTKDFFGKATNLTVSGQLEGELAAMALGEVYTFGPTFRAENSNTTRH 241
Query: 342 LAEFWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMV 401
LAEFWM+EPEMAF +++D+M+ AE ++K++ + LD+C DD+ F+ + YDK I RL+ V
Sbjct: 242 LAEFWMIEPEMAFYEIQDNMDLAEEFLKYLVKYALDNCIDDLNFLNEMYDKELIERLKSV 301
Query: 402 ASTPFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYP 461
TPF R+ YTEAV++L +A K+ FE KVEWGIDL SEHERYL E F+KPVI+ NYP
Sbjct: 302 VETPFVRLNYTEAVDIL-IATKQ--KFEYKVEWGIDLQSEHERYLVEKHFKKPVILTNYP 358
Query: 462 KGIKAFYMRLNDDLKTVAAMDVLVPKV 488
K IKAFYM+ N+D KTV AMDVL P +
Sbjct: 359 KAIKAFYMKANEDGKTVRAMDVLFPGI 385
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
R+ IK +L+ + +QV + GWV+T R G AF+ +NDGS +Q+++D
Sbjct: 3 RIKIKELLSNS---SQYIDQQVVLKGWVRTKR--GNKHVAFVALNDGSTIHTIQIVLDVA 57
Query: 89 VADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTL 146
+ QL V TG C+ + G + +G Q IE++ + +G+ DP YP+ K +L
Sbjct: 58 KFNEEQLKDVTTGACISISGKVVTS-QGAGQSIEVQGDTLEVIGVADPETYPLQKKGHSL 116
Query: 147 EFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQ 206
EFLR+ RPRTNT + V R+R+A+A+A H+F ++GF+Y+HTPIIT SD EGAG MFQ
Sbjct: 117 EFLREIAHLRPRTNTFSCVLRLRHAMAFAVHSFFNEKGFVYVHTPIITGSDAEGAGAMFQ 176
Query: 207 VTTL 210
VTTL
Sbjct: 177 VTTL 180
>sp|Q0HIB6|SYN_SHESM Asparagine--tRNA ligase OS=Shewanella sp. (strain MR-4) GN=asnS
PE=3 SV=1
Length = 466
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
DGK+DY +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 191 SDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 250
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPE+AF+ L D N AE +K+ + +L DD++F A++ DK+ I RL+ S+ F +
Sbjct: 251 EPEVAFATLSDIANLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQ 310
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
+ YT+AVE+L+ K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFY
Sbjct: 311 VDYTDAVEILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLN+D KTVAAMDVL P +
Sbjct: 368 MRLNEDGKTVAAMDVLAPGI 387
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSTVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q EL+V +V G V DP YP+ + ++E LR+ RP
Sbjct: 71 GCSVIVTGEIVESP-GAGQAYELQVTQVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F + GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTL 182
>sp|A3D3V7|SYN_SHEB5 Asparagine--tRNA ligase OS=Shewanella baltica (strain OS155 / ATCC
BAA-1091) GN=asnS PE=3 SV=1
Length = 466
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 156/204 (76%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D GK+DY +DFF ++AFLTVSGQL ETYACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF++L D AEA +K+ + +L DD+ F A++ DK+ I+RL+ S+
Sbjct: 247 FWMVEPEVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSFVSS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AVE+L+ G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVEILQNC---GRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLNDD KTVAAMDVL P +
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGI 387
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSKVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V + G + P G Q EL+V + G VD P YP+ + ++E LR+ RP
Sbjct: 71 GCSVVMTGDVVESP-GAGQAFELQVTDIEVAGWVDDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
>sp|A9KZ30|SYN_SHEB9 Asparagine--tRNA ligase OS=Shewanella baltica (strain OS195)
GN=asnS PE=3 SV=1
Length = 466
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 156/204 (76%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D GK+DY +DFF ++AFLTVSGQL ETYACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF++L D AEA +K+ + +L DD+ F A++ DK+ I+RL+ S+
Sbjct: 247 FWMVEPEVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSFVSS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AVE+L+ G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVEILQNC---GRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLNDD KTVAAMDVL P +
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGI 387
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSKVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V + G + P G Q EL+V ++ G VD P YP+ + ++E LR+ RP
Sbjct: 71 GCSVVMTGDVVESP-GAGQAFELQVTELEVAGWVDDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
>sp|Q8EEZ1|SYN_SHEON Asparagine--tRNA ligase OS=Shewanella oneidensis (strain MR-1)
GN=asnS PE=3 SV=1
Length = 466
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 152/200 (76%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
DGK+DY +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 191 SDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 250
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPE+AF+ L D AE +K+ + +L DD++F A++ DK+ I RL+ S+ F +
Sbjct: 251 EPEVAFATLNDIAGLAEGMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQ 310
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
+ YT+AVE+L+ K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFY
Sbjct: 311 VDYTDAVEILQ---KSGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLN+D KTVAAMDVL P +
Sbjct: 368 MRLNEDGKTVAAMDVLAPGI 387
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSTVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q EL+V V G V DP YP+ + ++E LR+ RP
Sbjct: 71 GCSVIVTGDIVESP-GAGQAYELQVTAVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F + GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTL 182
>sp|Q0HUL3|SYN_SHESR Asparagine--tRNA ligase OS=Shewanella sp. (strain MR-7) GN=asnS
PE=3 SV=1
Length = 466
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
DGK+DY +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 191 SDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 250
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPE+AF+ L D + AE +K+ D +L DD++F A++ DK+ I RL+ S+ F +
Sbjct: 251 EPEVAFATLSDIASLAEGMLKYAFDAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQ 310
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
+ YT+AVE+L+ K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFY
Sbjct: 311 VDYTDAVEILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLN+D KTVAAMDVL P +
Sbjct: 368 MRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSTVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPSSLENYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q EL+V V G V DP YP+ + ++E LR+ RP
Sbjct: 71 GCSVIVTGEIVESP-GAGQAYELQVTHVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F + GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTL 182
>sp|P58696|SYN_SALTY Asparagine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=asnS PE=3 SV=2
Length = 466
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 158/204 (77%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G++D+ +DFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF+DL+D+ AEA +K++ + +L+ DDM+F A+ DK I RL ST
Sbjct: 247 FWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVST 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AV +LE + GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVAILE---RCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 364 KAFYMRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYV 104
++V V GWV+T R K +FL V DGSC +Q +++ + + + V TG V V
Sbjct: 18 QEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I
Sbjct: 77 TGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIG 135
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 136 AVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|B1XKH1|SYN_SYNP2 Asparagine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=asnS PE=3 SV=1
Length = 460
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 148/200 (74%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
K+G +DY +DFF R A+LTVSGQL+ E A A +VYTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 185 KEGAVDYAEDFFGRPAYLTVSGQLEAEVMAMAFKDVYTFGPTFRAENSNTSRHLAEFWMV 244
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPEMAF D+ D + AE +++++ ++L+ C +DMEF K D S + + + F R
Sbjct: 245 EPEMAFCDIVGDQDLAEEFLRYIFKYVLEACPEDMEFFNKRIDNSVLATAQNIIENEFAR 304
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
ITYTEA+ LLE K K FE VEWGIDL SEHERYL E F+KP+IV NYPK IKAFY
Sbjct: 305 ITYTEAIALLE---KSNKTFEFPVEWGIDLQSEHERYLAEDLFKKPLIVSNYPKDIKAFY 361
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLNDD KTVAAMDVL PK+
Sbjct: 362 MRLNDDQKTVAAMDVLAPKI 381
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 54 GWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGTCVYVEGMLKN 110
GWVKT RE KG F+F+E++DGS LQVI+D ++AD ++ TG V G++
Sbjct: 20 GWVKTKREL-KG-FSFIEISDGSTMNGLQVIIDGNLADYEAIIKKLNTGAAVTATGLVVE 77
Query: 111 PPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRN 170
P G Q+IEL+ + V G DP YP+ K + + EFLR R +TNT+ AV R+RN
Sbjct: 78 SP-GKGQRIELQAKAVTVHGEADPETYPLQKKRHSFEFLRTIGHLRGKTNTMGAVMRVRN 136
Query: 171 ALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
A A A H F Q++GF++ HTPIIT SDCEGAGEMF VT
Sbjct: 137 ACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTNF 176
>sp|A6WMP4|SYN_SHEB8 Asparagine--tRNA ligase OS=Shewanella baltica (strain OS185)
GN=asnS PE=3 SV=1
Length = 466
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 152/198 (76%), Gaps = 3/198 (1%)
Query: 291 GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEP 350
GK+DY +DFF ++AFLTVSGQL ETYACA+S VYTFGPTFRAE+S+TSRHLAEFWMVEP
Sbjct: 193 GKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVEP 252
Query: 351 EMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERIT 410
E+AF++L D AEA +K+ + +L DD+ F A++ DK+ I+RL+ S+ F ++
Sbjct: 253 EVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSFVSSDFAQVD 312
Query: 411 YTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR 470
YT+AVE+L+ G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR
Sbjct: 313 YTDAVEILQNC---GRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMR 369
Query: 471 LNDDLKTVAAMDVLVPKV 488
LNDD KTVAAMDVL P +
Sbjct: 370 LNDDGKTVAAMDVLAPGI 387
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSKVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V + G + P G Q EL+V + G VD P YP+ + ++E LR+ RP
Sbjct: 71 GCSVVMTGDVVESP-GAGQAFELQVTDIEVAGWVDDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
>sp|Q56112|SYN_SALTI Asparagine--tRNA ligase OS=Salmonella typhi GN=asnS PE=3 SV=3
Length = 466
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G++D+ +DFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF+DL+D+ AEA +K++ +L+ DDM+F A+ DK I RL ST
Sbjct: 247 FWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVST 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AV +LE + GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVAILE---RCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 364 KAFYMRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYV 104
++V V GWV+T R K +FL V DGSC +Q +++ + + + V TG V V
Sbjct: 18 QEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I
Sbjct: 77 TGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIG 135
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 136 AVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|Q5PGF0|SYN_SALPA Asparagine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=asnS PE=3 SV=1
Length = 466
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G++D+ +DFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF+DL+D+ AEA +K++ +L+ DDM+F A+ DK I RL ST
Sbjct: 247 FWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVST 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AV +LE + GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVAILE---RCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 364 KAFYMRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYV 104
++V V GWV+T R K +FL V DGSC +Q +++ + + + V TG V V
Sbjct: 18 QEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I
Sbjct: 77 TGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIG 135
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 136 AVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|A1RK52|SYN_SHESW Asparagine--tRNA ligase OS=Shewanella sp. (strain W3-18-1) GN=asnS
PE=3 SV=1
Length = 466
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
+GK+DY +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 191 SEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 250
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPE+AF+ L D AEA +K+ + +L DD++F A++ DK+ I RL+ S+ F +
Sbjct: 251 EPEVAFATLSDIAGLAEAMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQ 310
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
+ YT+AV++L+ K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFY
Sbjct: 311 VDYTDAVDILQ---KCGKTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLN+D KTVAAMDVL P +
Sbjct: 368 MRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSKVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V + G + P G Q EL+V ++ G VD P YP+ + ++E LR+ RP
Sbjct: 71 GCSVVMTGDVVESP-GAGQAFELQVTELEVTGWVDDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
>sp|A4Y6E4|SYN_SHEPC Asparagine--tRNA ligase OS=Shewanella putrefaciens (strain CN-32 /
ATCC BAA-453) GN=asnS PE=3 SV=1
Length = 466
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
+GK+DY +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 191 SEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 250
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPE+AF+ L D AEA +K+ + +L DD++F A++ DK+ I RL+ S+ F +
Sbjct: 251 EPEVAFATLSDIAGLAEAMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQ 310
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
+ YT+AV++L+ K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFY
Sbjct: 311 VDYTDAVDILQ---KCGKTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLN+D KTVAAMDVL P +
Sbjct: 368 MRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSKVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V + G + P G Q EL+V ++ G VD P YP+ + ++E LR+ RP
Sbjct: 71 GCSVVMTGDVVESP-GAGQAFELQVTELEVTGWVDDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
>sp|A0KXL6|SYN_SHESA Asparagine--tRNA ligase OS=Shewanella sp. (strain ANA-3) GN=asnS
PE=3 SV=1
Length = 466
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
DGK+DY +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 191 SDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 250
Query: 349 EPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFER 408
EPE+AF+ L D + AE +K+ + +L DD++F A++ DK+ I RL+ S+ F +
Sbjct: 251 EPEVAFATLSDIASLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQ 310
Query: 409 ITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFY 468
+ YT+AV++L+ K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFY
Sbjct: 311 VDYTDAVDILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367
Query: 469 MRLNDDLKTVAAMDVLVPKV 488
MRLN+D KTVAAMDVL P +
Sbjct: 368 MRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G V V GWV+T R K +FL V DGSC +Q +V + + V
Sbjct: 12 GEHAVGSTVTVRGWVRT-RRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTA 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q EL+V V G V DP YP+ + ++E LR+ RP
Sbjct: 71 GCSVIVTGEIVESP-GAGQAYELQVTHVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+RN L+ A H F + GF+++ TP+IT SDCEGAGEMF+V+TL
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTL 182
>sp|Q65TR1|SYN_MANSM Asparagine--tRNA ligase OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=asnS PE=3 SV=1
Length = 467
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G +D++QDFF +++FLTVSGQL ETYACA+S VYTFGPTFRAE+S+T+RHLAE
Sbjct: 188 LPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTTRHLAE 247
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF+ L D+ AE +K++ + +L DD++F K+ DK INRL ++
Sbjct: 248 FWMVEPEVAFATLADNAKLAEDMLKYVFNAVLKERMDDLKFFEKHIDKDVINRLERFVAS 307
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F +I YT+A+++L +K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 308 DFAQIDYTDAIDVL---LKSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI 364
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 365 KAFYMRLNEDGKTVAAMDVLAPGI 388
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 8/174 (4%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +FL V DGSC +Q I++ D+ + V T
Sbjct: 13 GRTAIGEKVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIVNYESEVLRLTT 71
Query: 99 GTCVYVEGML-KNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFR 156
G V V G + K+P EG Q +EL+ + V VG V DP YP+ + ++E+LR+ R
Sbjct: 72 GCSVIVTGTVSKSPAEG--QAVELQAETVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLR 129
Query: 157 PRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
PRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTL 183
>sp|A1JMN8|SYN_YERE8 Asparagine--tRNA ligase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=asnS PE=3 SV=1
Length = 466
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G +D+++DFF ++AFLTVSGQL ETYACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF+ L D AE +K++ +L+ DDM+F A+ DK ++RL+ ++
Sbjct: 247 FWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFVTS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+A+E+L + G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAIEIL---LASGQKFENDVSWGIDLSSEHERYLAEQHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMR+N+D KTVAAMDVL P +
Sbjct: 364 KAFYMRMNEDGKTVAAMDVLAPGI 387
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G +V V GWV+T R K +F+ V DGSC LQ +V+ + + V T
Sbjct: 12 GRAAVDSEVTVRGWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q E++ + VG VD P YP+ + ++E+LR+ RP
Sbjct: 71 GCSVEVTGTVVASP-GEGQSFEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREVAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+R+ LA A H F + G+ ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 130 RTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|A6T726|SYN_KLEP7 Asparagine--tRNA ligase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=asnS PE=3 SV=1
Length = 466
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D GK+D+ +DFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWM+EPE+AF++L D AEA +K++ +L+ DDM+F A+ DK I+RL+ +
Sbjct: 247 FWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLEERADDMQFFAERVDKDAIDRLQRFITA 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+AV +LE GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAVTILENC---GKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMRLN+D KTVAAMDVL P +
Sbjct: 364 KAFYMRLNEDGKTVAAMDVLAPGI 387
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 99/166 (59%), Gaps = 6/166 (3%)
Query: 49 QVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVE 105
+V V GWV+T R K F+FL V DGSC +Q +++ + + Q V TG V V
Sbjct: 19 EVTVRGWVRT-RRDSKAGFSFLAVYDGSCFDPVQAVINNSLPNYNQEVLRLTTGCSVIVT 77
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAA 164
G + +G Q E++ V G V DP YP+ + ++E+LR+ RPRTN I A
Sbjct: 78 GKVV-ASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGA 136
Query: 165 VARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
VAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 137 VARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|Q66CG7|SYN_YERPS Asparagine--tRNA ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=asnS PE=3 SV=1
Length = 466
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G +D+++DFF ++AFLTVSGQL ETYACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF+ L D AE +K++ +L+ DDM+F A+ DK ++RL+ ++
Sbjct: 247 FWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFVTS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+A+E+L + G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAIEIL---LASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMR+N+D KTVAAMDVL P +
Sbjct: 364 KAFYMRMNEDGKTVAAMDVLAPGI 387
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +F+ V DGSC LQ +V+ + + V T
Sbjct: 12 GRAAVGSEVTVRGWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q E++ + VG VD P YP+ + ++E+LR+ RP
Sbjct: 71 GCSVEVTGTVVASP-GEGQSFEIQATAINVVGWVDDPDTYPMAAKRHSIEYLREVAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+R+ LA A H F + G+ ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 130 RTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTL 182
>sp|A4TMZ6|SYN_YERPP Asparagine--tRNA ligase OS=Yersinia pestis (strain Pestoides F)
GN=asnS PE=3 SV=1
Length = 466
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 286 IPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
+P+ D G +D+++DFF ++AFLTVSGQL ETYACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 187 LPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLKDDMNCAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVAST 404
FWMVEPE+AF+ L D AE +K++ +L+ DDM+F A+ DK ++RL+ ++
Sbjct: 247 FWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFVTS 306
Query: 405 PFERITYTEAVELLEVAVKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGI 464
F ++ YT+A+E+L + G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK I
Sbjct: 307 DFAQVDYTDAIEIL---LASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363
Query: 465 KAFYMRLNDDLKTVAAMDVLVPKV 488
KAFYMR+N+D KTVAAMDVL P +
Sbjct: 364 KAFYMRMNEDGKTVAAMDVLAPGI 387
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G G +V V GWV+T R K +F+ V DGSC LQ +V+ + + V T
Sbjct: 12 GRAAVGSEVTVRGWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P G Q E++ + VG VD P YP+ + ++E+LR+ RP
Sbjct: 71 GCSVEVTGTVVASP-GEGQSFEIQATAINVVGWVDDPDTYPMAAKRHSIEYLREVAHLRP 129
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RTN I AVAR+R+ LA A H F + G+ ++ TP+IT SD EGAGEMF+V+TL
Sbjct: 130 RTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTL 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,998,803
Number of Sequences: 539616
Number of extensions: 7987700
Number of successful extensions: 25432
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 643
Number of HSP's that attempted gapping in prelim test: 23304
Number of HSP's gapped (non-prelim): 1698
length of query: 507
length of database: 191,569,459
effective HSP length: 122
effective length of query: 385
effective length of database: 125,736,307
effective search space: 48408478195
effective search space used: 48408478195
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)