BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 010545
         (507 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9NUW8|TYDP1_HUMAN Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens GN=TDP1 PE=1 SV=2
          Length = 608

 Score =  293 bits (750), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 189/483 (39%), Positives = 265/483 (54%), Gaps = 59/483 (12%)

Query: 32  PSTFRLLRVQGLPAWANTSCVSIRDVIQ---GDIIVAILSNYMVDIDWLLPACPVLAKIP 88
           P  F L RV G+    N+  + I+D++    G ++ +   NY  D+DWL+   P   +  
Sbjct: 163 PFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKK 222

Query: 89  HVLVIHGESDGTLEHM-KRNKP-ANWILHKPPLPISFGTHHSKAMLLIYPRGVRIIVHTA 146
            +L++HG+      H+  + KP  N  L +  L I+FGTHH+K MLL+Y  G+R+++HT+
Sbjct: 223 PILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTS 282

Query: 147 NLIHVDWNNKSQGLWMQD-FP-LKDQNNLSEE--CGFENDLIDYLSTLKWPEFSANLPAH 202
           NLIH DW+ K+QG+W+   +P + D  + S E    F+ DLI YL     P     +   
Sbjct: 283 NLIHADWHQKTQGIWLSPLYPRIADGTHKSGESPTHFKADLISYLMAYNAPSLKEWI--- 339

Query: 203 GNFKINPSFFKKFNFSSAAVRLIASVPGYHTGSSLKKWGHMKLRTVLQECTFEKGFKKS- 261
                      K + S   V LI S PG   GS    WGH +L+ +L++        +S 
Sbjct: 340 -------DVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHASSMPNAESW 392

Query: 262 PLVYQFSSLGSL---DEKWM-AELSSSMSSGFSEDKTPLGIGEPL-IVWPTVEDVRCSLE 316
           P+V QFSS+GSL   + KW+ +E   SM +   E KTP     PL +++P+VE+VR SLE
Sbjct: 393 PVVGQFSSVGSLGADESKWLCSEFKESMLTLGKESKTPGKSSVPLYLIYPSVENVRTSLE 452

Query: 317 GYAAGNAIP-SPQKNVDKDFLKKYWAKWKASHTGRSRAMPHIKTFARY--NGQKLAWFLL 373
           GY AG ++P S Q    +++L  Y+ KW A  +GRS AMPHIKT+ R   +  K+AWFL+
Sbjct: 453 GYPAGGSLPYSIQTAEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLV 512

Query: 374 TSANLSKAAWGALQKNNSQLMIRSYELGVLILPSAKRHGCGFSCTSNIVPSEIKSGSTET 433
           TSANLSKAAWGAL+KN +QLMIRSYELGVL LPSA      F   S  V  +  +GS E 
Sbjct: 513 TSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSA------FGLDSFKVKQKFFAGSQEP 566

Query: 434 SQIQKTKLVTLTWHGSSDAGASSEVVYLPVPYELPPQRYSSEDVPWSWDKRYTKK-DVYG 492
                                   +   PVPY+LPP+ Y S+D PW W+  Y K  D +G
Sbjct: 567 ------------------------MATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHG 602

Query: 493 QVW 495
            +W
Sbjct: 603 NMW 605


>sp|Q8BJ37|TYDP1_MOUSE Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus GN=Tdp1 PE=2 SV=2
          Length = 609

 Score =  285 bits (729), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 185/484 (38%), Positives = 264/484 (54%), Gaps = 61/484 (12%)

Query: 32  PSTFRLLRVQGLPAWANTSCVSIRDVIQ---GDIIVAILSNYMVDIDWLLPACPVLAKIP 88
           P  F L RV G+ A  N+  + I+D++    G ++ +   NY  D+DWL+   P   +  
Sbjct: 164 PFQFYLTRVSGIKAKYNSKALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKN 223

Query: 89  HVLVIHGES-DGTLEHMKRNKP-ANWILHKPPLPISFGTHHSKAMLLIYPRGVRIIVHTA 146
            +L++HG+  +   +   + KP AN  L +  L I+FGTHH+K MLL+Y  G+R+++HT+
Sbjct: 224 PILLVHGDKREAKADLHAQAKPYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTS 283

Query: 147 NLIHVDWNNKSQGLWMQD-FPLKDQNNLS---EECGFENDLIDYLSTLKWPEFSANLPAH 202
           NLI  DW+ K+QG+W+   +P  DQ + +       F+ DL  YL+    P     +   
Sbjct: 284 NLIREDWHQKTQGIWLSPLYPRIDQGSHTAGESSTRFKADLTSYLTAYNAPPLQEWI--- 340

Query: 203 GNFKINPSFFKKFNFSSAAVRLIASVPGYHTGSSLKKWGHMKLRTVLQE--CTFEKGFKK 260
                     ++ + S   V LI S PG   GS    WGH +LR +LQ    +  KG + 
Sbjct: 341 -------DIIQEHDLSETNVYLIGSTPGRFQGSHRDNWGHFRLRKLLQAHAPSTPKG-EC 392

Query: 261 SPLVYQFSSLGSL---DEKWM-AELSSSMSSGFSEDKTPLGIGEPL-IVWPTVEDVRCSL 315
            P+V QFSS+GSL   + KW+ +E   S+ +   E + P     PL +++P+VE+VR SL
Sbjct: 393 WPIVGQFSSIGSLGPDESKWLCSEFKDSLLALREEGRPPGKSAVPLHLIYPSVENVRTSL 452

Query: 316 EGYAAGNAIPSPQKNVDKD-FLKKYWAKWKASHTGRSRAMPHIKTFARYNGQ--KLAWFL 372
           EGY AG ++P   +  +K  +L  Y+ KW A  +GRS AMPHIKT+ R +    KLAWFL
Sbjct: 453 EGYPAGGSLPYSIQTAEKQRWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKLAWFL 512

Query: 373 LTSANLSKAAWGALQKNNSQLMIRSYELGVLILPSAKRHGCGFSCTSNIVPSEIKSGSTE 432
           +TSANLSKAAWGAL+KN +QLMIRSYELGVL LPSA      F   +  V  +  S S E
Sbjct: 513 VTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSA------FGLDTFKVKQKFFSSSCE 566

Query: 433 TSQIQKTKLVTLTWHGSSDAGASSEVVYLPVPYELPPQRYSSEDVPWSWDKRYTKK-DVY 491
            +                           PVPY+LPP+ Y S+D PW W+  Y K  D +
Sbjct: 567 PT------------------------ASFPVPYDLPPELYRSKDRPWIWNIPYVKAPDTH 602

Query: 492 GQVW 495
           G +W
Sbjct: 603 GNMW 606


>sp|Q4G056|TYDP1_RAT Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus GN=Tdp1 PE=2
           SV=1
          Length = 609

 Score =  283 bits (724), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 184/484 (38%), Positives = 260/484 (53%), Gaps = 61/484 (12%)

Query: 32  PSTFRLLRVQGLPAWANTSCVSIRDVIQ---GDIIVAILSNYMVDIDWLLPACPVLAKIP 88
           P  F L RV G+ A  N+  + I+D++    G ++ +   NY  D++WL+   P   +  
Sbjct: 164 PFQFYLTRVSGIKAKYNSKALHIKDILSPLFGTLVSSAQFNYCFDVNWLIKQYPPEFRKK 223

Query: 89  HVLVIHG---ESDGTLEHMKRNKPANWILHKPPLPISFGTHHSKAMLLIYPRGVRIIVHT 145
            +L++HG   E+   L H +    AN  L +  L I+FGTHH+K MLL+Y  G+R+++HT
Sbjct: 224 PILLVHGDKREAKADL-HAQAKPYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHT 282

Query: 146 ANLIHVDWNNKSQGLWMQD-FPLKDQNNLSE---ECGFENDLIDYLSTLKWPEFSANLPA 201
           +NLI  DW+ K+QG+W+   +P   Q N +       F+ DL  YL     P     +  
Sbjct: 283 SNLIREDWHQKTQGIWLSPLYPRIYQGNHTSGESSTHFKADLTSYLMAYNAPPLQEWI-- 340

Query: 202 HGNFKINPSFFKKFNFSSAAVRLIASVPGYHTGSSLKKWGHMKLRTVLQECTFEKGFKKS 261
                      ++ + S   V LI S PG   GS    WGH +LR +LQ         + 
Sbjct: 341 --------DIIQEHDLSETNVYLIGSTPGRFQGSHKDNWGHFRLRKLLQAHAPSAPRGEC 392

Query: 262 -PLVYQFSSLGSL---DEKWM-AELSSSMSSGFSEDKTPLGIGEPL-IVWPTVEDVRCSL 315
            P+V QFSS+GSL   + KW+ +E   S+ +   E +TP     PL +++P+VE+VR SL
Sbjct: 393 WPVVGQFSSIGSLGPDESKWLCSEFKESLLAVREEGRTPGRSAVPLHLIYPSVENVRTSL 452

Query: 316 EGYAAGNAIPSPQKNVDKD-FLKKYWAKWKASHTGRSRAMPHIKTFARYNGQ--KLAWFL 372
           EGY AG ++P   +  +K  +L  Y+ KW A  +GRS AMPHIKT+ R +    KLAWFL
Sbjct: 453 EGYPAGGSLPYGIQTAEKQRWLHPYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKLAWFL 512

Query: 373 LTSANLSKAAWGALQKNNSQLMIRSYELGVLILPSAKRHGCGFSCTSNIVPSEIKSGSTE 432
           +TSANLSKAAWGAL+KN +QLMIRSYELGVL LPSA      F   +  V  +  S S+E
Sbjct: 513 VTSANLSKAAWGALEKNGAQLMIRSYELGVLFLPSA------FGLDTFKVKQKFFSSSSE 566

Query: 433 TSQIQKTKLVTLTWHGSSDAGASSEVVYLPVPYELPPQRYSSEDVPWSWDKRYTKK-DVY 491
                                    +   PVPY+LPP+ Y S+D PW W+  Y K  D +
Sbjct: 567 P------------------------MASFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTH 602

Query: 492 GQVW 495
           G +W
Sbjct: 603 GNMW 606


>sp|Q9VQM4|TYDP1_DROME Probable tyrosyl-DNA phosphodiesterase OS=Drosophila melanogaster
           GN=gkt PE=2 SV=1
          Length = 580

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 190/374 (50%), Gaps = 35/374 (9%)

Query: 54  IRDVIQGDIIVAILSNYMVDIDWLLPA---CPVLAKIPHVLVIHGESDGTLEHMKRNKPA 110
           I D   G+I   +  N+MVDI WLL       +L K P +L+   ES   L   K  +  
Sbjct: 175 ILDESLGEIESTVQINFMVDIGWLLGHYYFAGILDK-PLLLLYGDESPELLSIGKFKQQV 233

Query: 111 NWILHKPPLPISFGTHHSKAMLLIYPRG-VRIIVHTANLIHVDWNNKSQGLWMQD----F 165
             I  K P P  F T H+K M L Y  G +R+++ TANL   DW+N++QGLW+       
Sbjct: 234 TAIRVKMPTP--FATSHTKMMFLGYSDGSMRVVISTANLYEDDWHNRTQGLWISPKLPAL 291

Query: 166 PLKDQNNLSEE-CGFENDLIDYLSTLKWPEFSANLPAHGNFKINPSFFKKFNFSSAAVRL 224
           P+       E   GF+ DL+ YL   K  +    +          +  +  +FS+  V  
Sbjct: 292 PVDADTGAGESLTGFKQDLMLYLVEYKISQLQPWI----------ARIRNSDFSAINVFF 341

Query: 225 IASVPGYHTGSSLKK--WGHMKLRTVLQECTFEKGFKKSPLVYQFSSLGSLDEKWMAELS 282
           + SVPG H   S++   WGH +L ++L +        + P+V Q SS+GSL     A + 
Sbjct: 342 LGSVPGGHREGSVRGHPWGHARLASLLAKHAAPID-DRIPVVCQSSSIGSLGANVQAWIQ 400

Query: 283 SSMSSGFSEDKTPLGIGEPL----IVWPTVEDVRCSLEGYAAGNAIPSPQKNVDKD-FLK 337
               +   +D TP+G    +    +++P+  +V  S +G   G  +P  +   DK  +LK
Sbjct: 401 QDFVNSLKKDSTPVGKLRQMPPFKMIYPSYGNVAGSHDGMLGGGCLPYGKNTNDKQPWLK 460

Query: 338 KYWAKWKASHTGRSRAMPHIKTFARYN--GQKLAWFLLTSANLSKAAWGALQKNNSQ--- 392
            Y  +WK+S   RSRAMPHIK++ R+N   Q + WF+LTSANLSKAAWG   KN++    
Sbjct: 461 DYLQQWKSSDRFRSRAMPHIKSYTRFNLEDQSVYWFVLTSANLSKAAWGCFNKNSNIQPC 520

Query: 393 LMIRSYELGVLILP 406
           L I +YE GVL LP
Sbjct: 521 LRIANYEAGVLFLP 534


>sp|Q9TXV7|TYDP1_CAEEL Probable tyrosyl-DNA phosphodiesterase OS=Caenorhabditis elegans
           GN=F52C12.1 PE=3 SV=1
          Length = 451

 Score =  168 bits (426), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 215/458 (46%), Gaps = 85/458 (18%)

Query: 56  DVIQGDI--IVAILSNYMVDIDWLLPACP-VLAKIPHVLVIHGESDGTLEHMKRNKPANW 112
           D I  DI  I ++  ++M+D ++L+ + P  L + P  LV+       L    +N+    
Sbjct: 58  DEILADIRPINSLHFSFMLDFEFLIGSYPPSLREYPITLVVGAPDAPDLLKCTKNQKLVT 117

Query: 113 ILHKPPLPISFGTHHSKAMLLIYPRG-VRIIVHTANLIHVDWNNKSQGLWMQDFPLKDQN 171
           ++    LPI FGTHH+K  +L    G   +IV TANL+  DW  K+Q  +  +F +K  +
Sbjct: 118 VVGAS-LPIPFGTHHTKMSILEDEDGRFHVIVSTANLVPDDWEFKTQQFYY-NFGVKIAS 175

Query: 172 NLSEECGFENDLIDYLSTLKWPEFSANLPAHGNFKINPSFFKKFNFSSAAVRLIASVPGY 231
                  F++DL++YLS  +                     +K +FS  + RLI S PGY
Sbjct: 176 GTVPRSDFQDDLLEYLSMYR-----------NQLDTWKQLLQKVDFSQISDRLIFSTPGY 224

Query: 232 HTGSSLKKWGHMKLRTVLQE-CTFEKGFK---KSPLVYQFSSLGSLDE---KWMAE--LS 282
           HT    ++ GH +L  +L E   F+  ++   +   V Q SS+GSL      W     L 
Sbjct: 225 HTDPPTQRPGHPRLFRILSEKFPFDASYEHTERCTFVAQCSSIGSLGSAPINWFRGQFLQ 284

Query: 283 SSMSSGFSEDKTPLGIGEPLIVWPTVEDVRCSLEGYAAGNAIPSPQK-NVDKDFLKKYWA 341
           S   +  S  + P  +    +V+P+VEDVR S +GYA G ++P     +  + +L+    
Sbjct: 285 SLEGANPSPKQKPAKM---YLVFPSVEDVRTSCQGYAGGCSVPYRNSVHARQKWLQGNMC 341

Query: 342 KWKASHTGRSRAMPHIKTFARYNGQKLAWFLLTSANLSKAAWGAL----QKNNSQLMIRS 397
           KW+++   R+ A+PH KT+ +Y+ +   W LLTSANLSKAAWG +     KN  QLMIRS
Sbjct: 342 KWRSNAKRRTNAVPHCKTYVKYDKKVAIWQLLTSANLSKAAWGEVSFNKSKNVEQLMIRS 401

Query: 398 YELGVLILPSAKRHGCGFSCTSNIVPSEIKSGSTETSQIQKTKLVTLTWHGSSDAGASSE 457
           +E+GVLI                          T+ S+                      
Sbjct: 402 WEMGVLI--------------------------TDPSRFN-------------------- 415

Query: 458 VVYLPVPYELPPQRYSSEDVPWSWDKRYTKKDVYGQVW 495
                +P++ P   YS+ D P+  DK++ K D+ G +W
Sbjct: 416 -----IPFDYPLVPYSATDEPFVTDKKHEKPDILGCIW 448


>sp|Q9USG9|TYDP1_SCHPO Probable tyrosyl-DNA phosphodiesterase OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPCP31B10.05 PE=3 SV=1
          Length = 536

 Score =  135 bits (341), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 226/544 (41%), Gaps = 100/544 (18%)

Query: 27  SRDKLPSTFRLLRVQGLPAWANTSCVSIRDVIQGDIIVAILS-NYMVDIDWLLPAC---- 81
           S + + S   L ++  LP   N  C+ ++ +I    +      N+ VD+++LL       
Sbjct: 16  SNEIIDSPIFLNKISALPESENVHCLLLKQLIGSPQLKQTWQFNFCVDLNFLLENMHASV 75

Query: 82  --PVLAKIPHVLVIHGESDGTLEHMKRNKPANWILHKPPLPISFGTHHSKAMLLIYPR-G 138
              V  +I H      +S   L     + P N  L+   +P+ +GTHHSK M+  +    
Sbjct: 76  FPTVDVRITHGYDSKSDSLARLTAQMNHCPVNVKLYSVYVPM-WGTHHSKIMVNFFKDDS 134

Query: 139 VRIIVHTANLIHVDWNNKSQGLWMQ------------------------------DFPLK 168
            +I++HTANL+  DW   SQ ++                                   +K
Sbjct: 135 CQIVIHTANLVEPDWIGMSQAIFKTPLLYPKANDSLSTSSVPEYGNPSKIRKHEGSLDIK 194

Query: 169 DQNN---LSEECGFEN----------DLIDYLSTLKWPEFSANLPAHGNFKINPSFFKKF 215
           D  N   +  +  FEN          D +  +      +F A L  + +        K +
Sbjct: 195 DDRNCDIIDVDSAFENFKHKSDTRSSDDLGVIGRQFQQDFLAYLKNYRHTYELIEKLKMY 254

Query: 216 NFSSAAVRLIASVPGYHTGSSLKKWGHMKLRTVLQECTFEKGFKKSP---------LVYQ 266
           +FS+     I SVPG   G     WG  KL+ +L+    EK  KK            + Q
Sbjct: 255 DFSAIRAIFIGSVPGKFEGEEESSWGLGKLKKILK--MLEKDSKKDEKTKFEESDICISQ 312

Query: 267 FSSLGSLDEKWMAELSSSMSSGFSEDKTPLGIGEPLIVWPTVEDVRCSLEGYAAGNAI-- 324
            SS+GS   K   E  + ++ GF   +     G    ++PTV++V+ S+ G+ +G++I  
Sbjct: 313 CSSMGSFGPK--QEYIAELTDGFGCQR-----GNWKFLFPTVKEVQQSMLGWQSGSSIHF 365

Query: 325 ----PSPQKNVDKDFLKKYWAKWKASHTGRSRAMPHIKTFARY--NGQKLAWFLLTSANL 378
                +    V+     K   KW A   GR R  PHIKT+ R+  +G+ L W L+TSANL
Sbjct: 366 NILGKTAASQVETLKKGKNLCKWVAMKAGRQRVAPHIKTYMRFSNDGELLRWVLVTSANL 425

Query: 379 SKAAWGALQKNNSQ------LMIRSYELGVLILPSAKRHGCGFSCTSNIVPSEIKSGSTE 432
           SK AWG L+ + ++      L IRSYE GVL+ P          C   I+    K+ +  
Sbjct: 426 SKPAWGTLEGHKAKSRSTRGLRIRSYEAGVLLYPKLFEESQRAPC---IMTPTYKTNTPN 482

Query: 433 TSQIQKTKLVTLTWHGSSDAGASSEVVYLPVPYELPPQRYSSEDVPWSWDKRYTKKDVYG 492
             + ++       ++G         V+ + + ++ PP  Y  +D  WS     T KD  G
Sbjct: 483 LDEKRR------EFYG-------KRVIGVRMCWDFPPVEYEDKDEIWSPVINRTDKDWLG 529

Query: 493 QVWP 496
            VWP
Sbjct: 530 YVWP 533


>sp|P38319|TYDP1_YEAST Tyrosyl-DNA phosphodiesterase 1 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=TDP1 PE=1 SV=1
          Length = 544

 Score = 35.8 bits (81), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 5/38 (13%)

Query: 366 QKLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVL 403
           ++L W L TSANLS+ AWG + +       R+YE GVL
Sbjct: 454 KELEWCLYTSANLSQTAWGTVSRKP-----RNYEAGVL 486


>sp|Q5E0C4|HUTG_VIBF1 Formimidoylglutamase OS=Vibrio fischeri (strain ATCC 700601 /
           ES114) GN=hutG PE=3 SV=1
          Length = 350

 Score = 33.5 bits (75), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 371 FLLTSANLSKAAW-GALQKNNSQLMIRSYELGVLILPSAKRHGC---GFSCTSNIVPSEI 426
           F+  +++++  +W G +   + +L +R ++  V +  S  + G    GF+C   ++ ++ 
Sbjct: 5   FMKNNSSVNMTSWMGRVDHEDGELGLRWHQ-KVKVTNSTNQDGIMLLGFACDEGVIRNKG 63

Query: 427 KSGSTETSQIQKTKLVTLTWHGSSDAGASSEV 458
           + G+    Q+ +  L  L WH  SD     ++
Sbjct: 64  RKGAYAAPQVIRRALANLAWHHQSDVYDGGDI 95


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.422 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,300,797
Number of Sequences: 539616
Number of extensions: 8527681
Number of successful extensions: 16495
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16447
Number of HSP's gapped (non-prelim): 12
length of query: 507
length of database: 191,569,459
effective HSP length: 122
effective length of query: 385
effective length of database: 125,736,307
effective search space: 48408478195
effective search space used: 48408478195
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)