Query 010546
Match_columns 507
No_of_seqs 243 out of 1366
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 09:08:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.1E-44 7.3E-49 380.6 20.6 290 1-294 55-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 4E-42 1.4E-46 361.7 23.3 289 1-300 56-398 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 8.4E-41 2.9E-45 349.2 23.7 271 20-296 77-374 (381)
4 1j71_A Candidapepsin, aspartic 100.0 2.1E-40 7E-45 340.1 25.0 243 22-301 77-330 (334)
5 1tzs_A Cathepsin E; hydrolase, 100.0 4.4E-40 1.5E-44 340.0 26.3 252 21-299 78-346 (351)
6 2qzx_A Candidapepsin-5; aspart 100.0 3.3E-40 1.1E-44 339.5 24.9 252 21-304 76-340 (342)
7 3pvk_A Candidapepsin-2; hydrol 100.0 3.7E-40 1.3E-44 338.4 24.6 252 22-304 77-340 (342)
8 3fv3_A SAPP1P-secreted asparti 100.0 3.4E-40 1.2E-44 338.6 24.3 248 22-302 71-336 (339)
9 2x0b_A Renin; hydrolase-hormon 100.0 2.9E-40 1E-44 345.8 22.2 247 21-295 118-383 (383)
10 3psg_A Pepsinogen; hydrolase(a 100.0 4E-40 1.4E-44 343.1 21.8 244 22-295 112-370 (370)
11 3cms_A Chymosin B; hydrolase, 100.0 1.5E-39 5.1E-44 332.2 23.4 244 21-295 69-323 (323)
12 4aa9_A Chymosin; hydrolase, as 100.0 1.9E-39 6.4E-44 330.5 23.2 243 22-295 67-320 (320)
13 1dpj_A Proteinase A; proteinas 100.0 9.1E-39 3.1E-43 327.0 27.1 244 21-295 68-329 (329)
14 3k1w_A Renin; protease, altern 100.0 2.1E-39 7.3E-44 332.6 22.0 247 21-295 75-340 (341)
15 2apr_A Rhizopuspepsin; hydrola 100.0 6.4E-39 2.2E-43 327.9 25.3 244 21-295 69-324 (325)
16 1mpp_A Pepsin; hydrolase(acid 100.0 3.5E-39 1.2E-43 334.2 23.1 252 22-299 75-359 (361)
17 1am5_A Pepsin, acid proteinase 100.0 4.9E-39 1.7E-43 328.3 23.5 242 22-295 68-324 (324)
18 1yg9_A Aspartic protease BLA G 100.0 4.1E-39 1.4E-43 330.2 22.7 245 22-295 72-329 (330)
19 1miq_A Plasmepsin; aspartic pr 100.0 6.6E-39 2.2E-43 334.5 22.8 242 22-295 118-374 (375)
20 1htr_B Gastricsin; aspartyl pr 100.0 7.6E-39 2.6E-43 327.6 22.4 245 22-295 68-329 (329)
21 3c9x_A Trichoderma reesei aspa 100.0 1.5E-38 5.1E-43 325.7 23.2 244 21-294 71-329 (329)
22 1ibq_A Aspergillopepsin; aspar 100.0 8.8E-39 3E-43 326.9 21.1 245 21-294 66-324 (325)
23 1oew_A Endothiapepsin; hydrola 100.0 1.2E-38 4E-43 326.6 20.8 243 22-294 71-329 (329)
24 3vf3_A Beta-secretase 1; struc 100.0 6.4E-38 2.2E-42 329.2 25.6 292 2-301 50-380 (402)
25 3lpj_A Beta-secretase 1; alzhe 100.0 3.1E-38 1.1E-42 337.2 23.6 300 2-309 96-435 (455)
26 1qdm_A Prophytepsin; aspartic 100.0 3E-38 1E-42 339.3 22.8 264 21-294 108-477 (478)
27 1izd_A Aspartic proteinase; su 100.0 2.5E-38 8.6E-43 323.4 20.6 260 3-294 36-322 (323)
28 2ewy_A Beta-secretase 2; BACE2 100.0 6.3E-38 2.1E-42 327.0 23.8 289 3-299 36-359 (383)
29 1bxo_A Protein (penicillopepsi 100.0 2.4E-38 8.3E-43 323.4 19.4 260 3-294 36-322 (323)
30 2qp8_A Beta-secretase 1; BACE1 100.0 1.3E-37 4.5E-42 326.2 24.2 291 3-300 44-372 (395)
31 1wkr_A Polyporopepsin; hydrola 100.0 1.4E-37 4.9E-42 319.5 23.5 266 3-299 35-337 (340)
32 3qvc_A Histo-aspartic protease 100.0 7.7E-38 2.6E-42 333.7 21.1 243 21-295 192-449 (451)
33 2bju_A Plasmepsin II; aspartic 100.0 2.2E-37 7.6E-42 330.2 18.8 242 22-295 194-450 (453)
34 1lya_B Cathepsin D; lysosomal 100.0 5.7E-36 2E-40 293.1 23.3 222 52-295 3-241 (241)
35 1b5f_A Protein (cardosin A); h 99.9 5.2E-25 1.8E-29 215.6 14.1 161 22-190 70-237 (239)
36 1b5f_B Protein (cardosin A); h 99.6 8.9E-16 3E-20 126.9 8.4 72 223-295 11-87 (87)
37 1lya_A Cathepsin D; lysosomal 95.7 0.0066 2.2E-07 50.5 3.5 26 22-48 71-96 (97)
38 3s8i_A Protein DDI1 homolog 1; 94.0 0.11 3.8E-06 46.4 7.0 112 137-294 23-135 (148)
39 2i1a_A DNA damage-inducible pr 93.8 0.25 8.5E-06 43.5 8.9 27 266-292 108-134 (148)
40 2ks1_B Epidermal growth factor 91.5 0.14 4.8E-06 36.3 3.1 33 454-486 8-41 (44)
41 2l2t_A Receptor tyrosine-prote 90.2 0.22 7.4E-06 35.2 3.1 31 457-487 10-41 (44)
42 2k9y_A Ephrin type-A receptor 86.4 0.38 1.3E-05 33.2 2.3 31 453-483 9-40 (41)
43 2k1k_A Ephrin type-A receptor 77.7 1.5 5E-05 30.0 2.5 23 461-483 14-38 (38)
44 2jwa_A Receptor tyrosine-prote 71.1 3.3 0.00011 29.1 3.1 8 477-484 32-39 (44)
45 2l9u_A Receptor tyrosine-prote 64.1 5.6 0.00019 26.4 2.8 12 475-486 25-36 (40)
46 3re3_A 2-C-methyl-D-erythritol 52.0 27 0.00092 31.4 6.2 50 341-392 93-142 (162)
47 1iv3_A 2-C-methyl-D-erythritol 51.9 27 0.00094 31.0 6.2 50 341-392 87-136 (152)
48 2pmp_A 2-C-methyl-D-erythritol 51.3 28 0.00095 31.2 6.2 50 341-392 90-139 (160)
49 1gx1_A 2-C-methyl-D-erythritol 50.6 30 0.001 31.0 6.3 50 341-392 88-137 (160)
50 2klu_A T-cell surface glycopro 50.6 8.8 0.0003 29.3 2.3 36 451-487 4-42 (70)
51 1t0a_A 2C-methyl-D-erythritol 50.4 31 0.001 30.9 6.3 50 341-392 89-138 (159)
52 1iij_A ERBB-2 receptor protein 49.7 8 0.00027 25.8 1.8 12 472-483 23-34 (35)
53 3f0d_A 2-C-methyl-D-erythritol 46.2 36 0.0012 31.1 6.2 50 341-392 110-159 (183)
54 2knc_B Integrin beta-3; transm 45.1 13 0.00045 29.4 2.7 24 455-481 9-33 (79)
55 3b6n_A 2-C-methyl-D-erythritol 37.6 47 0.0016 30.4 5.5 50 341-392 115-164 (187)
56 1s7q_A H-2KB, H-2 class I hist 35.0 9.2 0.00031 38.5 0.4 19 476-494 304-325 (348)
57 1scf_A Stem cell factor; steel 33.7 8.7 0.0003 36.7 0.0 26 458-485 217-242 (273)
58 2lx0_A Membrane fusion protein 31.5 29 0.001 21.7 2.1 19 459-479 8-26 (32)
59 2k9j_B Integrin beta-3; transm 30.8 24 0.00083 24.5 1.9 23 455-477 8-31 (43)
60 2kvr_A Ubiquitin carboxyl-term 28.7 32 0.0011 29.6 2.8 35 362-396 65-99 (130)
61 1cd1_A CD1, MCD1D.1; immunolog 28.7 13 0.00046 36.6 0.4 12 473-484 299-310 (315)
62 2knc_B Integrin beta-3; transm 27.7 32 0.0011 27.1 2.4 28 456-483 14-41 (79)
63 2kog_A Vesicle-associated memb 25.7 21 0.00072 30.4 1.0 24 446-469 87-110 (119)
64 1lya_A Cathepsin D; lysosomal 24.7 66 0.0022 25.8 3.9 16 165-180 29-44 (97)
65 1n91_A ORF, hypothetical prote 24.7 38 0.0013 28.3 2.4 33 366-402 53-85 (108)
66 1w55_A ISPD/ISPF bifunctional 24.4 1E+02 0.0036 31.0 6.2 50 341-392 296-345 (371)
67 3udc_A Small-conductance mecha 20.5 1.5E+02 0.0051 28.5 6.2 66 362-430 198-268 (285)
68 2l6w_A Beta-type platelet-deri 25.9 21 0.00073 24.3 0.0 13 472-484 24-36 (39)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.1e-44 Score=380.61 Aligned_cols=290 Identities=22% Similarity=0.408 Sum_probs=228.2
Q ss_pred CCCcccccCCCC-CC------CC---CC------CCCCceEEEEe-CCCceEEEEEEEEEEEeCCcC------cccccce
Q 010546 1 MSNTYQALKCNP-DC------NC---DN------DRKECIYERRY-AEMSTSSGVLGVDVISFGNES------ELVPQRA 57 (507)
Q Consensus 1 ~SSTy~~v~C~~-~C------~C---~~------~~~~C~y~i~Y-~dgs~~sG~l~~D~vsig~~s------~i~~~~~ 57 (507)
+||||++++|.+ .| +| .+ .++.|.|++.| .|+++++|++++|+|+|++.+ .++++++
T Consensus 55 ~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~ 134 (413)
T 3vla_A 55 VSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134 (413)
T ss_dssp CCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEE
T ss_pred CCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCE
Confidence 589999999996 25 23 21 14579999999 588888999999999997321 2577899
Q ss_pred EEEEEEeecCCCCCCCcceEEeecCCCCCHHHHHHHcCCCCccEEEeecCCCCCCceEEeCCCCCCC--------C-cee
Q 010546 58 VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP--------D-MVF 128 (507)
Q Consensus 58 ~FG~~~~~s~~~~~~~~DGILGLG~~~~S~l~qL~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~--------~-~~~ 128 (507)
.|||++++........+|||||||++.+|++.||.+++.|+++||+||.+....+|.|+|||.|..+ . ..+
T Consensus 135 ~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~ 214 (413)
T 3vla_A 135 IFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTY 214 (413)
T ss_dssp EEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEE
T ss_pred EEECcccccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeE
Confidence 9999998743222356899999999999999999999999888999999865678999999998632 2 455
Q ss_pred eecCCCC------------CCceEEEEeEEEEcCEeeecCCceec----CCCcEEEecCcceEEechHHHHHHHHHHHHh
Q 010546 129 SHSDPFR------------SPYYNIELKELRVAGKPLKVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKE 192 (507)
Q Consensus 129 ~~~~~~~------------~~~w~V~l~sI~Vgg~~l~l~~~~f~----~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~ 192 (507)
+++.... ..+|.|+|++|.||++.+.+++..|. ++.++||||||++++||+++|++|.++|.++
T Consensus 215 tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 215 TPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp EECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred eecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 5543221 26999999999999999988766553 4578999999999999999999999999988
Q ss_pred hc--ccccccCCCCCccccccCCCccccccccCCCCeEEEEECC-CeEEEeCcCCceEEeeccCCcEEEEEEEcCC---C
Q 010546 193 TH--VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIFQNSD---S 266 (507)
Q Consensus 193 ~~--~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~g-g~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~~---~ 266 (507)
+. .+.+..+ ...++.||+.....-...+..+|+|+|+|++ ++++.|++++|+++... +.+|+++..... +
T Consensus 295 ~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~ 370 (413)
T 3vla_A 295 SAARNITRVAS--VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRT 370 (413)
T ss_dssp HHHTTCCEECC--CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSS
T ss_pred hcccCCCcCCC--CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCccc
Confidence 64 2333321 2346789864322111223589999999954 49999999999998753 679998877642 6
Q ss_pred CeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 267 TTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 267 ~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
.||||+.|||++|+|||++++|||||++
T Consensus 371 ~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 371 SIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 8999999999999999999999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=4e-42 Score=361.74 Aligned_cols=289 Identities=21% Similarity=0.427 Sum_probs=218.4
Q ss_pred CCCcccccCCCC-CC---------CCCCC------CCCceEEEEeC-CCceEEEEEEEEEEEeCCcC--c------cccc
Q 010546 1 MSNTYQALKCNP-DC---------NCDND------RKECIYERRYA-EMSTSSGVLGVDVISFGNES--E------LVPQ 55 (507)
Q Consensus 1 ~SSTy~~v~C~~-~C---------~C~~~------~~~C~y~i~Y~-dgs~~sG~l~~D~vsig~~s--~------i~~~ 55 (507)
.||||++++|.+ .| .|.+. ++.|.|.+.|+ |++.++|.+++|+|+|++.. . ++++
T Consensus 56 ~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~ 135 (403)
T 3aup_A 56 SSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVP 135 (403)
T ss_dssp CCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEE
T ss_pred CCCCCCccCCCCccccCccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCcccccccccccc
Confidence 589999999985 24 12221 36899999998 78889999999999998731 1 5778
Q ss_pred ceEEEEEEeecCC-CCCCCcceEEeecCCCCCHHHHHHHcCCCCccEEEeecCCCCCCceEEeCCCCCCCC----c----
Q 010546 56 RAVFGCENLETGD-LYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPPD----M---- 126 (507)
Q Consensus 56 ~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S~l~qL~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~~----~---- 126 (507)
++.|||++.+... +.....|||||||++.++++.||.+..+.+++||+||.+....+|.|+||| |++++ +
T Consensus 136 ~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~ 214 (403)
T 3aup_A 136 QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIF 214 (403)
T ss_dssp EEEEEEECGGGGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTT
T ss_pred CEEEECCcccccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccccccc
Confidence 9999999987544 444578999999999999999997665556889999988656789999999 76533 1
Q ss_pred -eeeecCCCC--CCceEEEEeEEEEcCEee-ecCCcee----cCCCcEEEecCcceEEechHHHHHHHHHHHHhhccccc
Q 010546 127 -VFSHSDPFR--SPYYNIELKELRVAGKPL-KVSPRIF----DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKR 198 (507)
Q Consensus 127 -~~~~~~~~~--~~~w~V~l~sI~Vgg~~l-~l~~~~f----~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~ 198 (507)
.+.|.+... ..+|.|.+++|.||++.+ .++...+ +++..+||||||++++||+++|++|.++|.+.+..+..
T Consensus 215 ~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~ 294 (403)
T 3aup_A 215 HDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQ 294 (403)
T ss_dssp TTEEEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGE
T ss_pred CceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccc
Confidence 344443332 379999999999999988 6665444 23457999999999999999999999999887654433
Q ss_pred ccCCCCCccccccCCCccccccccCCCCeEEEEECCC--eEEEeCcCCceEEeeccCCcEEEEEEEcCC---CCeeecHH
Q 010546 199 IRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG--QKLTLSPENYLFRHMKVSGAYCLGIFQNSD---STTLLGGI 273 (507)
Q Consensus 199 ~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg--~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~~---~~~ILG~~ 273 (507)
.... .....|+ +|+.. +.+|+|+|+|+++ +++.|++++|+++... +..|+++..... +.||||+.
T Consensus 295 ~~~~--~~~~~c~-----~c~~~-~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~ 364 (403)
T 3aup_A 295 VKSV--APFGLCF-----NSNKI-NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGAR 364 (403)
T ss_dssp ECCC--TTCSCEE-----CGGGC-CCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHH
T ss_pred cCCC--CCCCceE-----ECCCc-CcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChH
Confidence 3221 1234575 35443 4799999999555 6999999999997642 578996665542 57999999
Q ss_pred HhheEEEEEECCCCEEEE-------EeccCCccc
Q 010546 274 VVRNTLVTYDRGNDKVGF-------WKTNCSELW 300 (507)
Q Consensus 274 Flr~~yvVFD~en~rIGF-------A~s~C~~~~ 300 (507)
|||++|+|||++++|||| ++++|+.+.
T Consensus 365 fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~~ 398 (403)
T 3aup_A 365 QLEENLVVFDLARSRVGFSTSSLHSHGVKCADLF 398 (403)
T ss_dssp HHTTSCEEEETTTTEEEEESSCGGGGTCCGGGSC
T ss_pred HhcCeEEEEECCCCEEEEecccccccCCCccccc
Confidence 999999999999999999 566777643
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.4e-41 Score=349.15 Aligned_cols=271 Identities=17% Similarity=0.297 Sum_probs=206.0
Q ss_pred CCCc-eEEEEeCCCceEEEEEEEEEEEeCCcC-cccccce----EEEEEEeecCCCCCCCcceEEeecCCCCCHHHHHHH
Q 010546 20 RKEC-IYERRYAEMSTSSGVLGVDVISFGNES-ELVPQRA----VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVE 93 (507)
Q Consensus 20 ~~~C-~y~i~Y~dgs~~sG~l~~D~vsig~~s-~i~~~~~----~FG~~~~~s~~~~~~~~DGILGLG~~~~S~l~qL~~ 93 (507)
+..| .|.++|+||+.++|.+++|+|+|++.+ .+.++++ .|||++++........+|||||||++.+|++.||.+
T Consensus 77 ~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~ 156 (381)
T 1t6e_X 77 DKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVAS 156 (381)
T ss_dssp -CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHH
T ss_pred CCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEEeCCCcchhHHHHhh
Confidence 3578 599999999888999999999998531 1344444 679998763222235689999999999999999999
Q ss_pred cCCCCccEEEeecCCCCCCceEEeCCCCCC---C--CceeeecCCC-CCCceEEEEeEEEEcCEeeecCCceecCCCcEE
Q 010546 94 KGVISDSFSLCYGGMDVGGGAMVLGGITPP---P--DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (507)
Q Consensus 94 qglI~~~FSl~L~~~~~~~G~L~fGgvD~s---~--~~~~~~~~~~-~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~ai 167 (507)
+++++++||+||.+. .+|.|+|||+|.. + ...++++... ...+|.|.+++|.||++.+.++...|. +.++|
T Consensus 157 ~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~i 233 (381)
T 1t6e_X 157 AQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALA-TGGVM 233 (381)
T ss_dssp HHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSC-TTCEE
T ss_pred hcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHcc-CCCEE
Confidence 997788999999874 6799999998764 1 3445554321 124677999999999999887765553 45799
Q ss_pred EecCcceEEechHHHHHHHHHHHHhhc-------ccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEe
Q 010546 168 LDSGTTYAYLPGHAFAAFKDALIKETH-------VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTL 240 (507)
Q Consensus 168 IDSGTs~i~LP~~v~~~l~~ai~~~~~-------~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L 240 (507)
|||||++++||+++|++|.++|.+++. .+.+... ....++.|++.....-......+|+|+|+|++|+++.|
T Consensus 234 iDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l 312 (381)
T 1t6e_X 234 LSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVE-AVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTM 312 (381)
T ss_dssp ECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEEC-CCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEE
T ss_pred EECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCC-CCCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEEe
Confidence 999999999999999999999988764 1222211 11235789753211100111379999999965799999
Q ss_pred CcCCceEEeeccCCcEEEEEEEcCC--------CCeeecHHHhheEEEEEECCCCEEEEEeccC
Q 010546 241 SPENYLFRHMKVSGAYCLGIFQNSD--------STTLLGGIVVRNTLVTYDRGNDKVGFWKTNC 296 (507)
Q Consensus 241 ~p~dYi~~~~~~~~~~Cl~i~~~~~--------~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C 296 (507)
++++|+++... +..|+++..... +.||||+.|||++|+|||++++|||||++..
T Consensus 313 ~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 313 TGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp CHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred CCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 99999998653 679998666543 5799999999999999999999999999753
No 4
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-40 Score=340.08 Aligned_cols=243 Identities=19% Similarity=0.340 Sum_probs=205.0
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCCC--------CHHHHHHH
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLVE 93 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~--------S~l~qL~~ 93 (507)
.|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++... ..|||||||++.+ +++++|++
T Consensus 77 ~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~~ 147 (334)
T 1j71_A 77 NQDFSIEYGDLTSSQGSFYKDTVGFGG---ISIKNQQFADVTTTS------VDQGIMGIGFTADEAGYNLYDNVPVTLKK 147 (334)
T ss_dssp EEEEEEEBTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGSSTTCCCCCHHHHHHH
T ss_pred CCceEEEECCCCEEEEEEEEEEEEECC---EEEccEEEEEEEecC------CCccEEEEcCCcccCccccCCcHHHHHHH
Confidence 789999999998889999999999998 578899999998774 4799999999764 79999999
Q ss_pred cCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecC
Q 010546 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSG 171 (507)
+|+|+ ++||+||.+.+...|.|+|||+|+++ .....|.+.....+|.|.+++|.|+++.+.. +..++||||
T Consensus 148 qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~~iiDSG 220 (334)
T 1j71_A 148 QGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST-------NADVVLDSG 220 (334)
T ss_dssp TTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECTT
T ss_pred CCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC-------CccEEEeCC
Confidence 99997 77999998765668999999999987 3445565555667999999999999998753 247999999
Q ss_pred cceEEechHHHHHHHHHHHHhhcccccccCCCCCcc-ccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEee
Q 010546 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYD-DICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (507)
Q Consensus 172 Ts~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~-~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~ 250 (507)
|++++||++++++|.+++.+... .....+. .+| ..+|+|+|+|.+|.+++|++++|+++..
T Consensus 221 Tt~~~lP~~~~~~l~~~~~~~~~------~~~~~~~~~~C------------~~~p~i~f~f~~g~~~~i~~~~y~~~~~ 282 (334)
T 1j71_A 221 TTITYFSQSTADKFARIVGATWD------SRNEIYRLPSC------------DLSGDAVFNFDQGVKITVPLSELILKDS 282 (334)
T ss_dssp CSSEEECHHHHHHHHHHHTCEEE------TTTTEEECSSS------------CCCSEEEEEESTTCEEEEEGGGGEEECS
T ss_pred CCcEecCHHHHHHHHHHcCCccc------CCCceEEEEcC------------CCCCceEEEEcCCcEEEECHHHheeecC
Confidence 99999999999999999965542 1112344 667 2489999999778999999999999864
Q ss_pred ccCCcEEEEEEEcCCCCeeecHHHhheEEEEEECCCCEEEEEeccCCcccc
Q 010546 251 KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 301 (507)
Q Consensus 251 ~~~~~~Cl~i~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~~~ 301 (507)
+ +..|+..+... +.||||++|||++|+|||++++|||||+++|....+
T Consensus 283 ~--~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~ 330 (334)
T 1j71_A 283 D--SSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSD 330 (334)
T ss_dssp S--SSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCC
T ss_pred C--CCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccc
Confidence 3 34599877765 569999999999999999999999999999986544
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=340.02 Aligned_cols=252 Identities=25% Similarity=0.429 Sum_probs=201.2
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~ 93 (507)
..|.|+++|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +.....|||||||++.+ +++++|++
T Consensus 78 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 153 (351)
T 1tzs_A 78 PGQSFSIQYGTGS-LSGIIGADQVSVEG---LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMA 153 (351)
T ss_dssp CSCEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHH
T ss_pred CCCEEEEEeCCCC-eEEEEEEeEEEECC---eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHH
Confidence 5799999999987 69999999999998 57889999999887664 33457899999999865 48999999
Q ss_pred cCCCC-ccEEEeecCCCCC--CceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEe
Q 010546 94 KGVIS-DSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~~~--~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiID 169 (507)
+|+|. ++||+||++.... +|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. ..+..++||
T Consensus 154 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~~~~aiiD 228 (351)
T 1tzs_A 154 QNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFC-----SEGCQAIVD 228 (351)
T ss_dssp TTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEEC-----TTCEEEEEC
T ss_pred CCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEc-----CCCceEEec
Confidence 99997 7899999986433 7999999999986 3445555555678999999999999987532 235689999
Q ss_pred cCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEe
Q 010546 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (507)
Q Consensus 170 SGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~ 249 (507)
|||++++||++++++|.+++.+... . ..+..+|+. . +.+|+|+|+| +|.++.|++++|+.+.
T Consensus 229 SGTs~~~lP~~~~~~l~~~~~~~~~-------~-g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~yi~~~ 290 (351)
T 1tzs_A 229 TGTSLITGPSDKIKQLQNAIGAAPV-------D-GEYAVECAN--------L-NVMPDVTFTI-NGVPYTLSPTAYTLLD 290 (351)
T ss_dssp TTCSSEEECHHHHHHHHHHHTCEEC-------S-SSEEECGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEECC
T ss_pred cCCcceeCCHHHHHHHHHHhCCccc-------C-CeEEEeCCC--------C-ccCCcEEEEE-CCEEEEECHHHhEeec
Confidence 9999999999999999999854321 1 345556742 2 5799999999 8999999999999976
Q ss_pred eccCCcEEEEEEEcC------CCCeeecHHHhheEEEEEECCCCEEEEEeccCCcc
Q 010546 250 MKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (507)
Q Consensus 250 ~~~~~~~Cl~i~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~ 299 (507)
...++..|+..+... .+.||||++|||++|+|||++++|||||+++|...
T Consensus 291 ~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 291 FVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp -----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred cCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 532346899766532 46799999999999999999999999999998763
No 6
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.3e-40 Score=339.48 Aligned_cols=252 Identities=20% Similarity=0.327 Sum_probs=207.2
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCCC--------CHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLV 92 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~--------S~l~qL~ 92 (507)
..|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++... ..|||||||++.+ +++++|+
T Consensus 76 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~ 146 (342)
T 2qzx_A 76 LNTRFDIKYGDGSYAKGKLYKDTVGIGG---VSVRDQLFANVWSTS------ARKGILGIGFQSGEATEFDYDNLPISLR 146 (342)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEEC------SSSCEEECSCGGGCSSSSCCCCHHHHHH
T ss_pred CCCcEEEEeCCCCeEEEEEEEEEEEECC---EEecceEEEEEEecC------CCcCEEEEccccccCCCccCccHHHHHH
Confidence 3789999999998889999999999998 578899999998774 4799999999764 7999999
Q ss_pred HcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEec
Q 010546 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (507)
Q Consensus 93 ~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDS 170 (507)
++|+|+ ++||+||.+.+...|.|+|||+|+++ ...+.+.+.....+|.|.+++|.|+++.+.. +..++|||
T Consensus 147 ~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~aiiDS 219 (342)
T 2qzx_A 147 NQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA-------NTNVLLDS 219 (342)
T ss_dssp HTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECT
T ss_pred HCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC-------CcCEEEeC
Confidence 999997 77999998765668999999999986 3455555555667999999999999998753 24799999
Q ss_pred CcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEee
Q 010546 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (507)
Q Consensus 171 GTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~ 250 (507)
||++++||++++++|.+++.+.... .......+..+| ..+|+|+|+|.+|.++.|++++|+++..
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C------------~~~p~i~f~f~~g~~~~i~~~~~~~~~~ 284 (342)
T 2qzx_A 220 GTTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADC------------KTSGTIDFQFGNNLKISVPVSEFLFQTY 284 (342)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECT------------TCCCEEEEEETTTEEEEEEGGGGEECCB
T ss_pred CCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEEC------------CCCCcEEEEECCCcEEEEcHHHhccccc
Confidence 9999999999999999999665421 011111344566 2489999999778999999999999743
Q ss_pred ---ccCCcEEEEEEEcCCCCeeecHHHhheEEEEEECCCCEEEEEeccCCccccccc
Q 010546 251 ---KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (507)
Q Consensus 251 ---~~~~~~Cl~i~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~~~~~~ 304 (507)
...+..|+..+... +.||||++|||++|+|||++++|||||+++|....+..+
T Consensus 285 ~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 340 (342)
T 2qzx_A 285 YTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVA 340 (342)
T ss_dssp CTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred ccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEE
Confidence 11246799888765 469999999999999999999999999999987655443
No 7
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.7e-40 Score=338.43 Aligned_cols=252 Identities=20% Similarity=0.319 Sum_probs=205.4
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCC-------CCHHHHHHHc
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGR-------LSVVDQLVEK 94 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~-------~S~l~qL~~q 94 (507)
.|.|++.|++|+.++|.+++|+|+|++ +++.++.|||++... ..|||||||++. .+++++|+++
T Consensus 77 ~~~~~i~Yg~gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~L~~q 147 (342)
T 3pvk_A 77 NTPFKIGYGDGSSSQGTLYKDTVGFGG---VSIKNQVLADVDSTS------IDQGILGVGYKTNEAGGSYDNVPVTLKKQ 147 (342)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGCSSCSSCCHHHHHHHT
T ss_pred CCeEEEEecCCCeEEEEEEEEEEEECC---EEecceEEEEEEccC------CCccEEEecCccccccccCCcHHHHHHhc
Confidence 689999999998889999999999998 688899999998775 479999999987 4699999999
Q ss_pred CCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCc
Q 010546 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (507)
Q Consensus 95 glI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGT 172 (507)
|+|+ ++||+||++.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ +..++|||||
T Consensus 148 g~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~------~~~~iiDSGt 221 (342)
T 3pvk_A 148 GVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTD------NVDVLLDSGT 221 (342)
T ss_dssp TSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEE------EEEEEECTTC
T ss_pred CCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCC------CceEEEeCCC
Confidence 9997 67999998866668999999999987 34455555556679999999999999988642 2479999999
Q ss_pred ceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeecc
Q 010546 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (507)
Q Consensus 173 s~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~ 252 (507)
++++||++++++|.+++.+..... ......+..+|+ ..|+|+|+|++|.+++|++++|+.+....
T Consensus 222 t~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 222 TITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCN------------LSGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp SSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSC------------CCSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred CCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecC------------CCCceEEEECCCCEEEEcHHHheeecccc
Confidence 999999999999999996554210 000112556672 46999999966899999999999974321
Q ss_pred CC---cEEEEEEEcCCCCeeecHHHhheEEEEEECCCCEEEEEeccCCccccccc
Q 010546 253 SG---AYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (507)
Q Consensus 253 ~~---~~Cl~i~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~~~~~~ 304 (507)
.+ ..|+..+... +.||||++|||++|+|||++++|||||+++|.+..+..+
T Consensus 287 ~g~~~~~C~~~i~~~-~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~ 340 (342)
T 3pvk_A 287 DGQPYDKCQLLFDVN-DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISA 340 (342)
T ss_dssp ------CEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred CCCcCCeeEEEEeeC-CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEE
Confidence 22 6799888774 789999999999999999999999999999986555443
No 8
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.4e-40 Score=338.56 Aligned_cols=248 Identities=22% Similarity=0.340 Sum_probs=206.3
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCCCC---------------
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRLS--------------- 86 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~S--------------- 86 (507)
.|.|.+.|++|+.++|.+++|+|+|++ ++++++.|||++..++ .+||||||++.++
T Consensus 71 ~~~~~i~Yg~gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~~~~~~ 141 (339)
T 3fv3_A 71 GAAFTIRYGDGSTSQGTWGKDTVTING---VSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSGRQTTPNYD 141 (339)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTSCBCSCCCC
T ss_pred CceEEEEECCCceEEEEEEEEEEEECC---EEECceEEEEEEecCC------CceeEEecCccccccccccccccCccCC
Confidence 799999999998899999999999998 5788999999998764 6999999997642
Q ss_pred -HHHHHHHcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCC
Q 010546 87 -VVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGG 163 (507)
Q Consensus 87 -~l~qL~~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~ 163 (507)
++++|+++|+|+ +.||+||++.+...|.|+|||+|+++ ...+.+.+.....+|.|++++|.|+++.+.. +
T Consensus 142 ~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~ 214 (339)
T 3fv3_A 142 NVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF-------G 214 (339)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE-------E
T ss_pred cHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC-------C
Confidence 899999999998 67999999866668999999999987 3445555555667999999999999998763 2
Q ss_pred CcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcC
Q 010546 164 HGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPE 243 (507)
Q Consensus 164 ~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~ 243 (507)
..++|||||++++||++++++|.+++.+..... ......+..+|+. ..+|+|+|+|++|.+++|+++
T Consensus 215 ~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~----------~~~p~i~f~f~~g~~~~v~~~ 281 (339)
T 3fv3_A 215 DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQYLYFIDCNT----------DTSGTTVFNFGNGAKITVPNT 281 (339)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEEEEEECTTC----------CCCSEEEEEETTSCEEEEEGG
T ss_pred ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCceEEEecCC----------CCCCcEEEEECCCCEEEECHH
Confidence 479999999999999999999999997554311 0112245567742 368999999966899999999
Q ss_pred CceEEeeccCCcEEEEEEEcCCCCeeecHHHhheEEEEEECCCCEEEEEeccCCccccc
Q 010546 244 NYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRR 302 (507)
Q Consensus 244 dYi~~~~~~~~~~Cl~i~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~~~~ 302 (507)
+|+.+.. +..|+..+.. ++.||||++|||++|+|||++++|||||+++|.+..+.
T Consensus 282 ~~~~~~~---~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i 336 (339)
T 3fv3_A 282 EYVYQNG---DGTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSI 336 (339)
T ss_dssp GGEEECS---SSCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCE
T ss_pred HheeeCC---CCeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccce
Confidence 9998763 3467666655 56899999999999999999999999999999965543
No 9
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=345.76 Aligned_cols=247 Identities=24% Similarity=0.420 Sum_probs=203.4
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~ 93 (507)
..|.|+++|++|+ ++|++++|+|+|++ +++. +.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 118 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~ 192 (383)
T 2x0b_A 118 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 192 (383)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEEETT---EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHT
T ss_pred CCcEEEEEcCCcc-EEEEEEeeEEEEcC---ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHh
Confidence 3689999999987 79999999999998 5777 999999987654 44567899999999876 48999999
Q ss_pred cCCCC-ccEEEeecCCCCC----CceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEE
Q 010546 94 KGVIS-DSFSLCYGGMDVG----GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~~~----~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~ai 167 (507)
||+|+ ++||+||++.... +|.|+|||+|+++ ...+.|++.....+|.|.+++|.|+++.+. ...+..++
T Consensus 193 qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~-----~~~~~~ai 267 (383)
T 2x0b_A 193 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-----CEDGCLAL 267 (383)
T ss_dssp TTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCB-----STTCEEEE
T ss_pred CCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEE-----cCCCcEEE
Confidence 99997 7899999886433 8999999999987 345566665677899999999999998652 22456899
Q ss_pred EecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceE
Q 010546 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (507)
Q Consensus 168 IDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~ 247 (507)
|||||+++++|++++++|.++|.+.. ....+..+|+. . +.+|+|+|+| +|..+.|+|++|++
T Consensus 268 iDTGTs~~~lP~~~~~~i~~~i~a~~--------~~g~~~v~C~~--------~-~~~P~i~f~~-~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 268 VDTGASYISGSTSSIEKLMEALGAKK--------RLFDYVVKCNE--------G-PTLPDISFHL-GGKEYTLTSADYVF 329 (383)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEE--------CSSCEEEEGGG--------T-TTCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EcCCCceEEcCHHHHHHHHHHhCCcc--------cCCcEEEeccc--------c-ccCceEEEEE-CCEEEEECHHHhEe
Confidence 99999999999999999999985432 22345567742 2 5799999999 89999999999999
Q ss_pred EeeccCCcEEEEEEEcC------CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 248 RHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 248 ~~~~~~~~~Cl~i~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+....++..|+..+... .+.||||++|||++|+|||++|+|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 87543356899755432 4679999999999999999999999999873
No 10
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4e-40 Score=343.14 Aligned_cols=244 Identities=26% Similarity=0.482 Sum_probs=199.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHHc
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~q 94 (507)
.|.|.++|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +....+|||||||++.+ +++++|+++
T Consensus 112 ~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~q 187 (370)
T 3psg_A 112 SQELSITYGTGS-MTGILGYDTVQVGG---ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQ 187 (370)
T ss_dssp EEEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred CcEEEEEeCCce-EEEEEEEEEEeeCC---cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHC
Confidence 689999999997 79999999999998 68889999999988764 44557899999999765 489999999
Q ss_pred CCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCc
Q 010546 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (507)
Q Consensus 95 glI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGT 172 (507)
|+|+ ++||+||.+....+|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. ..+..++|||||
T Consensus 188 g~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~-----~~~~~aiiDTGT 262 (370)
T 3psg_A 188 GLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIAC-----SGGCQAIVDTGT 262 (370)
T ss_dssp TCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEEC-----TTCEEEEECTTC
T ss_pred CCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEec-----CCCceEEEcCCC
Confidence 9997 77999999865568999999999986 4455666666678999999999999987752 245689999999
Q ss_pred ceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeecc
Q 010546 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (507)
Q Consensus 173 s~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~ 252 (507)
+++++|++++++|.++|.+.. .....+..+|. .. ..+|+|+|+| +|.++.|++++|+.+.
T Consensus 263 s~~~lP~~~~~~i~~~i~a~~-------~~~g~~~v~C~--------~~-~~lP~i~f~~-~g~~~~l~~~~yi~~~--- 322 (370)
T 3psg_A 263 SLLTGPTSAIANIQSDIGASE-------NSDGEMVISCS--------SI-DSLPDIVFTI-DGVQYPLSPSAYILQD--- 322 (370)
T ss_dssp CSEEEEHHHHHHHHHHTTCEE-------CTTCCEECCGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEEC---
T ss_pred CcEECCHHHHHHHHHHhCCcc-------cCCCcEEEECC--------Cc-ccCCcEEEEE-CCEEEEECHHHhcccC---
Confidence 999999999999999885432 12223555663 32 5799999999 8999999999999982
Q ss_pred CCcEEEEEEEcC------CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 253 SGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 253 ~~~~Cl~i~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+..|+..+... ++.||||++|||++|+|||++++|||||++.
T Consensus 323 -~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 -DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp -SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 34699766652 2359999999999999999999999999973
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.5e-39 Score=332.21 Aligned_cols=244 Identities=24% Similarity=0.412 Sum_probs=200.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~ 93 (507)
..|.|+++|++|+ ++|.+++|+|+|++ +++.++.|||++.+++. +.....|||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 144 (323)
T 3cms_A 69 LGKPLSIHYGTGS-MQGILGYDTVTVSN---IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMN 144 (323)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHH
T ss_pred CCcEEEEEeCCCC-eEEEEEEEEEEECC---eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHH
Confidence 3689999999987 69999999999998 57889999999987653 33346899999999764 58999999
Q ss_pred cCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecC
Q 010546 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSG 171 (507)
+|+|. ++||+||++.+. .|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++||||
T Consensus 145 q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~-----~~~~aiiDSG 218 (323)
T 3cms_A 145 RHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACE-----GGCQAILDTG 218 (323)
T ss_dssp TTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEST-----TCEEEEECTT
T ss_pred CCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecC-----CCcEEEEecC
Confidence 99996 779999988643 3999999999986 34455555556789999999999999887532 3468999999
Q ss_pred cceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeec
Q 010546 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (507)
Q Consensus 172 Ts~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~ 251 (507)
|+++++|++++++|.+++.+... ....+..+|+. . +.+|+|+|+| +|.++.|+|++|+.+.
T Consensus 219 Tt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~-- 279 (323)
T 3cms_A 219 TSKLVGPSSDILNIQQAIGATQN-------QYGEFDIDCDN--------L-SYMPTVVFEI-NGKMYPLTPSAYTSQD-- 279 (323)
T ss_dssp CCSEEECHHHHHHHHHHHTCEEE-------TTTEEEECTTC--------T-TTSCCEEEEE-TTEEEEECHHHHEEEE--
T ss_pred CccEeCCHHHHHHHHHHhCCeec-------CCCcEEEECCC--------C-ccCceEEEEE-CCEEEEECHHHhccCC--
Confidence 99999999999999999854321 12234556743 2 5799999999 8999999999999982
Q ss_pred cCCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 252 VSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 252 ~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 280 --~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 --QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp --TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 56899766553 5789999999999999999999999999874
No 12
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.9e-39 Score=330.50 Aligned_cols=243 Identities=24% Similarity=0.439 Sum_probs=202.5
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHHc
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~q 94 (507)
.|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++...+. +.....|||||||++.+ +++++|+++
T Consensus 67 ~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~ 142 (320)
T 4aa9_A 67 GKPLSIHYGTGS-MEGFLGYDTVTVSN---IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDR 142 (320)
T ss_dssp EEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHT
T ss_pred CcEEEEEECCcE-EEEEEEEEEEEECC---EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhC
Confidence 689999999997 69999999999998 57889999999988764 43556899999999754 489999999
Q ss_pred CCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCc
Q 010546 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (507)
Q Consensus 95 glI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGT 172 (507)
|+|+ +.||+||++. ...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++|||||
T Consensus 143 g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~iiDsGt 216 (320)
T 4aa9_A 143 HLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACV-----GGCQAILDTGT 216 (320)
T ss_dssp TCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEEST-----TCEEEEECTTC
T ss_pred CCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccC-----CCcEEEEECCC
Confidence 9996 7799999985 568999999999987 34455555567789999999999999887632 34689999999
Q ss_pred ceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeecc
Q 010546 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (507)
Q Consensus 173 s~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~ 252 (507)
++++||++++++|.+++.+... ....+..+|.. . +.+|+|+|+| +|.++.|++++|+.+.
T Consensus 217 t~~~lP~~~~~~i~~~~~~~~~-------~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~--- 276 (320)
T 4aa9_A 217 SVLFGPSSDILKIQMAIGATEN-------RYGEFDVNCGN--------L-RSMPTVVFEI-NGRDYPLSPSAYTSKD--- 276 (320)
T ss_dssp SSEEEEHHHHHHHHHHTTCEEC-------TTSCEEECGGG--------G-GGCCCEEEEE-TTEEEEECHHHHEEEE---
T ss_pred CcEECCHHHHHHHHHHhCCccc-------CCCcEEEeCCC--------C-CcCceEEEEE-CCEEEEECHHHhccCC---
Confidence 9999999999999998854321 22345566742 2 5799999999 8999999999999763
Q ss_pred CCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 253 SGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 253 ~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 -QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp -TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 56899755543 4679999999999999999999999999974
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=9.1e-39 Score=327.01 Aligned_cols=244 Identities=21% Similarity=0.410 Sum_probs=200.3
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecC-CCCCCCcceEEeecCCCCC------HHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-DLYTQRADGIMGLGRGRLS------VVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~-~~~~~~~DGILGLG~~~~S------~l~qL~~ 93 (507)
..|.|+++|++| +++|.+++|+|+|++ ++++++.|||++.+++ .+.....|||||||++.++ ++++|++
T Consensus 68 ~~~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 143 (329)
T 1dpj_A 68 NGTEFAIQYGTG-SLEGYISQDTLSIGD---LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQ 143 (329)
T ss_dssp EEEEEEEEETTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEECCc-eEEEEEEEEEEEECC---eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHh
Confidence 369999999998 579999999999998 5788999999998765 2445568999999997654 7899999
Q ss_pred cCCCC-ccEEEeecCCC---CCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEE
Q 010546 94 KGVIS-DSFSLCYGGMD---VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~---~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiI 168 (507)
+|+|+ ++||+||.+.. ..+|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. .+..++|
T Consensus 144 qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~------~~~~aii 217 (329)
T 1dpj_A 144 QDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAEL------ESHGAAI 217 (329)
T ss_dssp TTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEC------SSCEEEE
T ss_pred cCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecC------CCccEEe
Confidence 99997 78999998642 247999999999986 3455565555678999999999999987753 3468999
Q ss_pred ecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEE
Q 010546 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (507)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~ 248 (507)
||||++++||++++++|.+++.+.. .....+..+|. .. ..+|+|+|+| +|.+++|+|++|+.+
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~~-------~~~g~~~~~C~--------~~-~~~P~i~f~f-~g~~~~i~~~~y~~~ 280 (329)
T 1dpj_A 218 DTGTSLITLPSGLAEMINAEIGAKK-------GWTGQYTLDCN--------TR-DNLPDLIFNF-NGYNFTIGPYDYTLE 280 (329)
T ss_dssp CTTCSCEEECHHHHHHHHHHHTCEE-------CTTSSEEECGG--------GG-GGCCCEEEEE-TTEEEEECTTTSEEE
T ss_pred eCCCCcEECCHHHHHHHHHHhCCcc-------CCCCeEEEECC--------CC-CcCCcEEEEE-CCEEEEECHHHhEec
Confidence 9999999999999999999985431 12234445663 22 5799999999 789999999999998
Q ss_pred eeccCCcEEEEEEEcC------CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 249 HMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 249 ~~~~~~~~Cl~i~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
. +..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 281 ~----~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 281 V----SGSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp E----TTEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C----CCEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 6 35899655432 4679999999999999999999999999874
No 14
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.1e-39 Score=332.63 Aligned_cols=247 Identities=24% Similarity=0.419 Sum_probs=204.5
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCCC------HHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS------VVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S------~l~qL~~ 93 (507)
..|.|.+.|++|+ ++|.+++|+|+|++ +++ ++.|||++..++. +.....|||||||++..+ ++++|++
T Consensus 75 ~~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 149 (341)
T 3k1w_A 75 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 149 (341)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCCEEEEEECCcE-EEEEEEEEEEEECC---cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHH
Confidence 4789999999987 79999999999998 567 9999999988764 445678999999997764 8999999
Q ss_pred cCCCC-ccEEEeecCCC----CCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEE
Q 010546 94 KGVIS-DSFSLCYGGMD----VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~----~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~ai 167 (507)
+|+|. ++||+||++.. ...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++
T Consensus 150 qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~i 224 (341)
T 3k1w_A 150 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCE-----DGCLAL 224 (341)
T ss_dssp HTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEECT-----TCEEEE
T ss_pred CCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeecC-----CCCEEE
Confidence 99997 77999999864 348999999999987 34555665567789999999999999875432 346899
Q ss_pred EecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceE
Q 010546 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (507)
Q Consensus 168 IDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~ 247 (507)
|||||++++||++++++|.+++.+... ... +..+|. .. ..+|+|+|+| +|.++.|+|++|+.
T Consensus 225 iDsGtt~~~lP~~~~~~i~~~~~~~~~-------~~g-~~~~C~--------~~-~~~p~i~f~f-~g~~~~l~~~~~~~ 286 (341)
T 3k1w_A 225 VDTGASYISGSTSSIEKLMEALGAKKR-------LFD-YVVKCN--------EG-PTLPDISFHL-GGKEYTLTSADYVF 286 (341)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC-------SSC-EEEEGG--------GG-GGCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EECCCChhcCCHHHHHHHHHHcCCeec-------CCC-eEEeCC--------CC-CcCCcEEEEE-CCEEEEECHHHhee
Confidence 999999999999999999999854321 112 556673 22 5799999999 89999999999999
Q ss_pred EeeccCCcEEEEEEEc-----C-CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 248 RHMKVSGAYCLGIFQN-----S-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 248 ~~~~~~~~~Cl~i~~~-----~-~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+.....+..|+..+.. . .+.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 287 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 8654346789976665 2 4679999999999999999999999999985
No 15
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.4e-39 Score=327.92 Aligned_cols=244 Identities=22% Similarity=0.409 Sum_probs=199.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCCC-------CHHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL-------SVVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~-------S~l~qL~~ 93 (507)
..|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+.....|||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 69 DGRTWSISYGDGSSASGILAKDNVNLGG---LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECC---EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 3589999999998889999999999998 5788999999998776555556899999999764 48999999
Q ss_pred cCCCC-ccEEEeecCC-CCCCceEEeCCCCCCC-CceeeecCCC-CCCceEEEEeEEEEcCEeeecCCceecCCCcEEEe
Q 010546 94 KGVIS-DSFSLCYGGM-DVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (507)
Q Consensus 94 qglI~-~~FSl~L~~~-~~~~G~L~fGgvD~s~-~~~~~~~~~~-~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiID 169 (507)
+|+|. ++||+||++. ....|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.||++ +. ..+..++||
T Consensus 146 qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~------~~~~~~iiD 218 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV------ASSFDGILD 218 (325)
T ss_dssp TTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE------ECCEEEEEC
T ss_pred cCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec------CCCceEEEe
Confidence 99996 7899999753 3468999999999886 3334444332 46799999999999993 32 235689999
Q ss_pred cCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEe
Q 010546 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (507)
Q Consensus 170 SGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~ 249 (507)
|||++++||+++|+++++++.+.+. +. ..+..+|+. ..+|+|+|+| +|.++.|++++|+++.
T Consensus 219 SGTs~~~lP~~~~~~~~~~~~~~~~------~~-g~~~~~C~~----------~~~p~i~f~f-~g~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 219 TGTTLLILPNNIAASVARAYGASDN------GD-GTYTISCDT----------SAFKPLVFSI-NGASFQVSPDSLVFEE 280 (325)
T ss_dssp TTCSSEEEEHHHHHHHHHHHTCEEC------SS-SCEEECSCG----------GGCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred cCCccEECCHHHHHHHHHHHhcccC------CC-CeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHEEEcC
Confidence 9999999999999999999966543 11 245556741 3589999999 6669999999999876
Q ss_pred eccCCcEEEEEEEcC-CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 250 MKVSGAYCLGIFQNS-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 250 ~~~~~~~Cl~i~~~~-~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
. +..|++.+... .+.||||++|||++|+|||++++|||||++.
T Consensus 281 ~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 281 F---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp E---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4 67899877654 6789999999999999999999999999873
No 16
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.5e-39 Score=334.17 Aligned_cols=252 Identities=19% Similarity=0.313 Sum_probs=204.2
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecC-----C-CCCCCcceEEeecCCC-----------
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-----D-LYTQRADGIMGLGRGR----------- 84 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~-----~-~~~~~~DGILGLG~~~----------- 84 (507)
.|.|+++|++|+ ++|.+++|+|+|++ +++.++.|||++.+++ . +.....|||||||++.
T Consensus 75 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 150 (361)
T 1mpp_A 75 DYNLNITYGTGG-ANGIYFRDSITVGG---ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDT 150 (361)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCC
T ss_pred CCeEEEEECCce-EEEEEEEEEEEECC---EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccccccc
Confidence 589999999997 79999999999998 6788999999999876 3 4456789999999964
Q ss_pred -CCHHHHHHHcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCC----ceEEEEeEEEEcCEeeecCC
Q 010546 85 -LSVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSP----YYNIELKELRVAGKPLKVSP 157 (507)
Q Consensus 85 -~S~l~qL~~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~----~w~V~l~sI~Vgg~~l~l~~ 157 (507)
.+++++|+++|+|. ++||+||++. ...|.|+|||+|+++ ...+.|.+..... +|.|.+++|.|+++.+..
T Consensus 151 ~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~-- 227 (361)
T 1mpp_A 151 YNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVS-- 227 (361)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEE--
T ss_pred CCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeecc--
Confidence 35788999999997 7899999985 457999999999976 3344444433333 899999999999987642
Q ss_pred ceecCCCcEE-EecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCC-CeEEEEE--C
Q 010546 158 RIFDGGHGTV-LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTF-PQVDMVF--G 233 (507)
Q Consensus 158 ~~f~~~~~ai-IDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~l-P~I~f~f--~ 233 (507)
..+..++ |||||++++||++++++|.+++.+... . ....+..+|+. . +.+ |+|+|+| +
T Consensus 228 ---~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~---~~g~~~~~C~~--------~-~~~~p~i~f~f~~g 289 (361)
T 1mpp_A 228 ---FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---E---SQQGYTVPCSK--------Y-QDSKTTFSLVLQKS 289 (361)
T ss_dssp ---EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---E---ETTEEEEEHHH--------H-TTCCCEEEEEEECT
T ss_pred ---CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---C---CCCcEEEECCC--------c-ccCCCcEEEEEEcC
Confidence 1245799 999999999999999999999865422 1 12234566742 2 467 9999999 4
Q ss_pred C----CeEEEeCcCCceEEeeccCCcEEEEEEEc-CCCCeeecHHHhheEEEEEECCCCEEEEEeccCCcc
Q 010546 234 N----GQKLTLSPENYLFRHMKVSGAYCLGIFQN-SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (507)
Q Consensus 234 g----g~~~~L~p~dYi~~~~~~~~~~Cl~i~~~-~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~ 299 (507)
+ |.++.|+|++|+++... .+..|+..+.. .++.||||++|||++|+|||++++|||||+++|+..
T Consensus 290 ~~~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 290 GSSSDTIDVSVPISKMLLPVDK-SGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp TCSSCEEEEEEEGGGGEEECSS-SSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred CcCCCCeEEEECHHHhEEecCC-CCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 2 89999999999998643 24689965555 467899999999999999999999999999999864
No 17
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.9e-39 Score=328.33 Aligned_cols=242 Identities=24% Similarity=0.420 Sum_probs=200.3
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHHc
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~q 94 (507)
.|.|+++|++|+. +|.+++|+|++++ +++.++.|||++.+++. +.....|||||||++.+ +++++|+++
T Consensus 68 ~~~~~i~Yg~Gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (324)
T 1am5_A 68 GKTVDLTYGTGGM-RGILGQDTVSVGG---GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQ 143 (324)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEEESSS---SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred CcEEEEEECCCCe-EEEEEECceeECC---cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhc
Confidence 6899999999875 9999999999998 57889999999988765 44567899999999765 489999999
Q ss_pred CCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCc
Q 010546 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (507)
Q Consensus 95 glI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGT 172 (507)
|+|. ++||+||++.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. .+ ..++|||||
T Consensus 144 g~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~-~~aiiDSGT 217 (324)
T 1am5_A 144 SLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAAC-----EG-CQAIVDTGT 217 (324)
T ss_dssp TCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCC-----CC-EEEEECTTC
T ss_pred CCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeec-----cC-ceEEEecCC
Confidence 9996 77999999865568999999999986 3344444444567999999999999987531 12 689999999
Q ss_pred ceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeecc
Q 010546 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (507)
Q Consensus 173 s~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~ 252 (507)
++++||++++++|.+++.+. . ....+..+|+. .+.+|+|+|+| +|.+++|+|++|+.+.
T Consensus 218 t~~~lp~~~~~~l~~~~~~~-~-------~~g~~~~~C~~---------~~~~P~i~f~f-~g~~~~i~~~~y~~~~--- 276 (324)
T 1am5_A 218 SKIVAPVSALANIMKDIGAS-E-------NQGEMMGNCAS---------VQSLPDITFTI-NGVKQPLPPSAYIEGD--- 276 (324)
T ss_dssp SSEEECTTTHHHHHHHHTCE-E-------CCCCEECCTTS---------SSSSCCEEEEE-TTEEEEECHHHHEEES---
T ss_pred ccEECCHHHHHHHHHHhCCc-c-------cCCcEEEeCCC---------cccCCcEEEEE-CCEEEEECHHHhcccC---
Confidence 99999999999999998544 1 12235567743 25799999999 8999999999999986
Q ss_pred CCcEEEEEEEcC------CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 253 SGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 253 ~~~~Cl~i~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 -QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp -SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 45799766542 4579999999999999999999999999874
No 18
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=4.1e-39 Score=330.16 Aligned_cols=245 Identities=16% Similarity=0.278 Sum_probs=200.0
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCCCC-------HHHHHHHc
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRLS-------VVDQLVEK 94 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~S-------~l~qL~~q 94 (507)
.|.|++.|++|+. +|.+++|+|+|++ +++.++.|||++.+...+.....|||||||++.++ ++++|+++
T Consensus 72 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~---~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 147 (330)
T 1yg9_A 72 GNVQVKFFDTGSA-VGRGIEDSLTISQ---LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEE 147 (330)
T ss_dssp EEEEEEETTTEEE-EEEEEEEEEEETT---EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHT
T ss_pred CCEEEEEECCceE-EEEEEEEEEEECC---EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhc
Confidence 4789999999975 9999999999998 57889999999988332444568999999998765 99999999
Q ss_pred CCCCccEEEeecCCCCC--CceEEeCCCCCCCC-ceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecC
Q 010546 95 GVISDSFSLCYGGMDVG--GGAMVLGGITPPPD-MVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (507)
Q Consensus 95 glI~~~FSl~L~~~~~~--~G~L~fGgvD~s~~-~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSG 171 (507)
|+|+++||+||++.... .|.|+|||+|++++ ..+.|.+.....+|.|.+++|.|+++.+. ..+..++||||
T Consensus 148 g~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSG 221 (330)
T 1yg9_A 148 NLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA------PAGTQAIIDTS 221 (330)
T ss_dssp TSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE------CTTCEEEECTT
T ss_pred CCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc------CCCcEEEEecC
Confidence 99977799999875323 79999999999873 34555555567899999999999998764 23568999999
Q ss_pred cceEEechHHHHHHHHHHHHhhcccccccCCCCCc-cccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEee
Q 010546 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNY-DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (507)
Q Consensus 172 Ts~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~-~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~ 250 (507)
|+++++|++++++|.+++.+... ..+ ...+ ..+|. .. +.+|+|+|+| +|.++.|++++|+.+.
T Consensus 222 Ts~~~lP~~~~~~l~~~~~~~~~----~~g-~~~~~~~~C~--------~~-~~~p~i~f~f-gg~~~~l~~~~y~~~~- 285 (330)
T 1yg9_A 222 KAIIVGPKAYVNPINEAIGCVVE----KTT-TRRICKLDCS--------KI-PSLPDVTFVI-NGRNFNISSQYYIQQN- 285 (330)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEEE----ECS-SCEEEEECGG--------GG-GGSCCEEEEE-TTEEEEECHHHHEEEE-
T ss_pred CccccCCHHHHHHHHHHhCCccc----CCC-ceEEEEEECC--------Cc-cccCcEEEEE-CCEEEEECHHHhcccC-
Confidence 99999999999999999854321 011 0023 44563 22 5799999999 8999999999999987
Q ss_pred ccCCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 251 KVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 251 ~~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 286 ---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 ---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 56899766642 5689999999999999999999999999873
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=6.6e-39 Score=334.53 Aligned_cols=242 Identities=23% Similarity=0.341 Sum_probs=200.1
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEe----ecCCCCCCCcceEEeecCCCC------CHHHHH
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQL 91 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~----~s~~~~~~~~DGILGLG~~~~------S~l~qL 91 (507)
.|.|.++|++|+ ++|.+++|+|+|++ +++.+ .|||++. ++ .+.....|||||||++.+ +++++|
T Consensus 118 ~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l 191 (375)
T 1miq_A 118 GTKVDITYGSGT-VKGFFSKDLVTLGH---LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVEL 191 (375)
T ss_dssp EEEEEEEETTEE-EEEEEEEEEEEETT---EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHHH
T ss_pred CcEEEEEeCCCe-EEEEEEEEEEEEcC---ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHHH
Confidence 689999999987 69999999999998 57788 9999998 54 333456899999999865 489999
Q ss_pred HHcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEe
Q 010546 92 VEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (507)
Q Consensus 92 ~~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiID 169 (507)
+++|+|. ++||+||++.+..+|.|+|||+|+++ ...+.|.+.....+|.|.++ |.||++.+ .+..++||
T Consensus 192 ~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~--------~~~~aiiD 262 (375)
T 1miq_A 192 KNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM--------EKANVIVD 262 (375)
T ss_dssp HHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE--------EEEEEEEC
T ss_pred HhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc--------ccceEEec
Confidence 9999997 78999999865568999999999986 34455555556789999999 99999876 13579999
Q ss_pred cCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEe
Q 010546 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (507)
Q Consensus 170 SGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~ 249 (507)
|||+++++|++++++|.+++.+... .....+..+|+. ..+|+|+|+| +|.++.|+|++|+.+.
T Consensus 263 SGTs~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~----------~~~P~i~f~f-~g~~~~l~~~~yi~~~ 325 (375)
T 1miq_A 263 SGTTTITAPSEFLNKFFANLNVIKV------PFLPFYVTTCDN----------KEMPTLEFKS-ANNTYTLEPEYYMNPI 325 (375)
T ss_dssp TTBSSEEECHHHHHHHHHHHTCEEC------TTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECGGGSEEES
T ss_pred CCCccEEcCHHHHHHHHHHhCCccc------CCCCeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHhEeec
Confidence 9999999999999999999855321 122345667742 4799999999 8999999999999987
Q ss_pred eccCCcEEEEEEEcCC---CCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 250 MKVSGAYCLGIFQNSD---STTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 250 ~~~~~~~Cl~i~~~~~---~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
...+...|+..+...+ +.||||++|||++|+|||++++|||||+++
T Consensus 326 ~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 326 LEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 5323468996666543 689999999999999999999999999873
No 20
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=7.6e-39 Score=327.59 Aligned_cols=245 Identities=24% Similarity=0.455 Sum_probs=200.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHHc
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~q 94 (507)
.|.|+++|++|+. +|.+++|+|+|++ +++.++.|||++.+++. +.....|||||||++.+ +++++|+++
T Consensus 68 ~~~~~i~Yg~gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (329)
T 1htr_B 68 GQTFSLQYGSGSL-TGFFGYDTLTVQS---IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQE 143 (329)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEEEETT---EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHT
T ss_pred CcEEEEEeCCCCe-EEEEEeeeEEEcc---eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhc
Confidence 6899999999875 9999999999998 57889999999887664 33457899999999875 489999999
Q ss_pred CCCC-ccEEEeecCCCCC-CceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecC
Q 010546 95 GVIS-DSFSLCYGGMDVG-GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (507)
Q Consensus 95 glI~-~~FSl~L~~~~~~-~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSG 171 (507)
|+|. ++||+||++.+.. +|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. ...+..++||||
T Consensus 144 g~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~----~~~~~~aiiDSG 219 (329)
T 1htr_B 144 GALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGW----CSEGCQAIVDTG 219 (329)
T ss_dssp TCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCT----TTTCEEEEECTT
T ss_pred CCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeee----cCCCceEEEecC
Confidence 9996 7799999986444 7999999999986 3445555555678999999999999987642 123568999999
Q ss_pred cceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeec
Q 010546 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (507)
Q Consensus 172 Ts~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~ 251 (507)
|++++||++++++|.+++.+... ....+..+|+. . +.+|+|+|+| +|.+++|+|++|+.+..
T Consensus 220 Tt~~~lp~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~~- 281 (329)
T 1htr_B 220 TSLLTVPQQYMSALLQATGAQED-------EYGQFLVNCNS--------I-QNLPSLTFII-NGVEFPLPPSSYILSNN- 281 (329)
T ss_dssp CCSEEEEGGGHHHHHHHHTCEEC-------TTSCEEECGGG--------G-GGSCCEEEEE-TTEEEEECHHHHEEECS-
T ss_pred CccEECCHHHHHHHHHHhCCeec-------CCCeEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccCC-
Confidence 99999999999999999854321 12245566742 2 5799999999 89999999999999874
Q ss_pred cCCcEEEEEEEcC------CC-CeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 252 VSGAYCLGIFQNS------DS-TTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 252 ~~~~~Cl~i~~~~------~~-~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+ .|+..+... ++ .||||++|||++|+|||++++|||||+++
T Consensus 282 --g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 --G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp --S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 3 899655432 34 79999999999999999999999999873
No 21
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.5e-38 Score=325.75 Aligned_cols=244 Identities=15% Similarity=0.241 Sum_probs=195.5
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-CCCcceEEeecCCCC---------CHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL---------SVVDQ 90 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~---------S~l~q 90 (507)
+.|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+. ....|||||||++.+ +++++
T Consensus 71 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 71 SGASWSISYGDGSSSSGDVYTDKVTIGG---FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp TTCBEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCcEEEEEEEEEEEECC---EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 4689999999999889999999999998 5788999999998766443 246899999999653 48999
Q ss_pred HHHcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCC-CCCceEEEEeEEEEcCEeeecCCceecCCCcEE
Q 010546 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (507)
Q Consensus 91 L~~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~-~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~ai 167 (507)
|+++ |. ++||+||.+ ..+|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.|+++.+.. .+..++
T Consensus 148 l~~~--i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~------~~~~ai 217 (329)
T 3c9x_A 148 AASS--LAEPLFTADLRH--GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNR------NSIDGI 217 (329)
T ss_dssp HHTT--SSSSEEEEECCS--SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCS------CCEEEE
T ss_pred HHHh--cCCCEEEEEecC--CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccC------CCceEE
Confidence 9886 64 789999986 357999999999886 3344444433 467999999999999986631 345899
Q ss_pred EecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceE
Q 010546 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (507)
Q Consensus 168 IDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~ 247 (507)
|||||++++||++++++|.+++..... ......+..+|+ ..+|+|+|+| +|.++.|++++|++
T Consensus 218 iDSGTt~~~lp~~~~~~i~~~i~~a~~-----~~~~~~~~~~C~-----------~~~P~i~f~f-~g~~~~ip~~~~~~ 280 (329)
T 3c9x_A 218 ADTGTTLLLLDDNVVDAYYANVQSAQY-----DNQQEGVVFDCD-----------EDLPSFSFGV-GSSTITIPGDLLNL 280 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTCTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECGGGGEE
T ss_pred EECCCCcEeCCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeee
Confidence 999999999999999999887632211 111223455674 3789999999 79999999999998
Q ss_pred EeeccCCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 248 ~~~~~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
.........|++.+... .+.||||++|||++|+|||++++|||||+.
T Consensus 281 ~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 281 TPLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 76432347899866654 578999999999999999999999999974
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=8.8e-39 Score=326.90 Aligned_cols=245 Identities=16% Similarity=0.291 Sum_probs=196.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCC-CCcceEEeecCCCC---------CHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~-~~~DGILGLG~~~~---------S~l~q 90 (507)
+.|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 66 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 142 (325)
T 1ibq_A 66 SGYSWDISYGDGSSASGDVYRDTVTVGG---VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDT 142 (325)
T ss_dssp TTCBEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCEEEEEeCCCCEEEEEEEEeEEEECC---EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHH
Confidence 5799999999998889999999999998 57889999999988765433 46899999999654 37899
Q ss_pred HHHcCCCCccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCC-CCCceEEEEeEEEEcCEeeecCCceecCCCcEEE
Q 010546 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (507)
Q Consensus 91 L~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~-~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiI 168 (507)
|.++ +-+++||+||.+. ..|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.|+++.+. ..+..++|
T Consensus 143 l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~------~~~~~aii 213 (325)
T 1ibq_A 143 VKSQ-LDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS------SSGFSAIA 213 (325)
T ss_dssp HGGG-SSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB------SCCEEEEE
T ss_pred HHHh-cCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc------CCCceEEE
Confidence 9887 3347899999863 57999999999986 3344444332 46799999999999998663 13468999
Q ss_pred ecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEE
Q 010546 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (507)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~ 248 (507)
||||++++||++++++|.++|..... ......+..+|+ ..+|+|+|+| +|.++.|++++|+++
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~ 276 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVSGAQE-----SYEAGGYVFSCS-----------TDLPDFTVVI-GDYKAVVPGKYINYA 276 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCBC-----CSSSSSCEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCCcEeCCHHHHHHHHHhCCCceE-----cCcCCeEEEEcC-----------CCCCcEEEEE-CCEEEEECHHHhccc
Confidence 99999999999999999988732111 111223455674 3789999999 899999999999987
Q ss_pred eeccCCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 249 ~~~~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
....+...|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 277 ~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 277 PVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp ESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 6432347899977654 568999999999999999999999999986
No 23
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.2e-38 Score=326.55 Aligned_cols=243 Identities=18% Similarity=0.293 Sum_probs=195.0
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-CCCcceEEeecCCCC---------CHHHHH
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL---------SVVDQL 91 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~---------S~l~qL 91 (507)
.|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+. ....|||||||++.+ +++++|
T Consensus 71 ~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 71 GATWSISYGDGSSSSGDVYTDTVSVGG---LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred CCeEEEEeCCCCcEEEEEEEEEEEECC---EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 689999999998889999999999998 5788999999998766443 246899999999654 488999
Q ss_pred HHcCCCC-ccEEEeecCCCCCCceEEeCCCCCCCC-ceeeecCCC-CCCceEEEEeEEEEcCEeeecCCceecCCCcEEE
Q 010546 92 VEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPPD-MVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (507)
Q Consensus 92 ~~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~~-~~~~~~~~~-~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiI 168 (507)
.++ |. ++||+||.+ ..+|.|+|||+|++++ ..+.|.+.. ...+|.|.+++|.|+++.+.. .+..++|
T Consensus 148 ~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~------~~~~aii 217 (329)
T 1oew_A 148 KAS--LDSPVFTADLGY--HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKS------TSIDGIA 217 (329)
T ss_dssp TTT--SSSSEEEEECCS--SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEE------EEEEEEE
T ss_pred HHh--ccCcEEEEEccC--CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccC------CCceEEE
Confidence 886 64 789999986 3579999999999863 344444332 467999999999999986631 2358999
Q ss_pred ecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEE
Q 010546 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (507)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~ 248 (507)
||||++++||++++++|.++|..... ......+..+|+ ..+|+|+|+| +|.++.|++++|+++
T Consensus 218 DSGTt~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~ip~~~~~~~ 280 (329)
T 1oew_A 218 DTGTTLLYLPATVVSAYWAQVSGAKS-----SSSVGGYVFPCS-----------ATLPSFTFGV-GSARIVIPGDYIDFG 280 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCCCEECCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeee
Confidence 99999999999999999887732211 112223456674 3789999999 899999999999987
Q ss_pred eeccCCcEEEEEEEcC--CCCeeecHHHhheEEEEEEC-CCCEEEEEec
Q 010546 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDR-GNDKVGFWKT 294 (507)
Q Consensus 249 ~~~~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~-en~rIGFA~s 294 (507)
........|++.+... .+.||||++|||++|+|||+ +++|||||+.
T Consensus 281 ~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 281 PISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ESSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ecCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 6432347899976654 57899999999999999999 9999999974
No 24
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.4e-38 Score=329.17 Aligned_cols=292 Identities=21% Similarity=0.330 Sum_probs=216.1
Q ss_pred CCcccccCCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-
Q 010546 2 SNTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY- 70 (507)
Q Consensus 2 SSTy~~v~C~~~C~C~~----------~~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~- 70 (507)
.|+.-||.|..-|.|.. ....|.|.++|++|+ ++|.+++|+|+|++... ....+.|+++....+.+.
T Consensus 50 GSs~lWv~~~~c~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~-~~~~~~~~~~~~~~~~~~~ 127 (402)
T 3vf3_A 50 GSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGK-WEGELGTDLVSIPHGPN-VTVRANIAAITESDKFFIN 127 (402)
T ss_dssp TCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCE-EEEEEEEEEEECTTSCS-CEEEEEEEEEEEEESCSCT
T ss_pred CCCceEEccCCCCcccCCcCcccCcccccCCCEEEEEECcEE-EEEEEEEEEEEECCccc-cceeeeEEEEEcccccccc
Confidence 36667888876444322 123799999999997 59999999999985321 122345888877766543
Q ss_pred CCCcceEEeecCCCC--------CHHHHHHHcCCCCccEEEeecCC----------CCCCceEEeCCCCCCCC-ceeeec
Q 010546 71 TQRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPPD-MVFSHS 131 (507)
Q Consensus 71 ~~~~DGILGLG~~~~--------S~l~qL~~qglI~~~FSl~L~~~----------~~~~G~L~fGgvD~s~~-~~~~~~ 131 (507)
....|||||||++.+ +++++|+++++|+++||+||++. ....|.|+|||+|++++ ..+.|.
T Consensus 128 ~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~ 207 (402)
T 3vf3_A 128 GSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYT 207 (402)
T ss_dssp TCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEE
T ss_pred CCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEE
Confidence 356899999999643 58999999999988899999752 24579999999999873 445555
Q ss_pred CCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCC-CCccccc
Q 010546 132 DPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPD-PNYDDIC 210 (507)
Q Consensus 132 ~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~-~~~~~~C 210 (507)
+.....+|.|.+++|.|+++.+.++...++ ...++|||||++++||++++++|.++|.+.... ....... ..+..+|
T Consensus 208 p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~C 285 (402)
T 3vf3_A 208 PIRREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVC 285 (402)
T ss_dssp ECSSBTTBEECEEEEEETTEECCCCGGGGG-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCTTGGGTCSCEE
T ss_pred eCCcCcEEEEEEeEEEECCEEecccccccC-CCeEEEECCCCcccCCHHHHHHHHHHHhhhccc-cccCccccccccccc
Confidence 555678999999999999999887654332 458999999999999999999999999887531 1111100 1225678
Q ss_pred cCCCccccccccCCCCeEEEEECCCe-----EEEeCcCCceEEeeccC--CcEEEEE-EEcCCCCeeecHHHhheEEEEE
Q 010546 211 FSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLGI-FQNSDSTTLLGGIVVRNTLVTY 282 (507)
Q Consensus 211 ~~~~~~~~~~~~~~lP~I~f~f~gg~-----~~~L~p~dYi~~~~~~~--~~~Cl~i-~~~~~~~~ILG~~Flr~~yvVF 282 (507)
+..... .+..+|+|+|+|+++. ++.|+|++|+.+..... ...|+++ +...++.||||++|||++|+||
T Consensus 286 ~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvf 361 (402)
T 3vf3_A 286 WQAGTT----PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVF 361 (402)
T ss_dssp EETTCC----CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEE
T ss_pred cccccc----hHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEE
Confidence 643221 1247999999995432 69999999999865421 2489962 3333678999999999999999
Q ss_pred ECCCCEEEEEeccCCcccc
Q 010546 283 DRGNDKVGFWKTNCSELWR 301 (507)
Q Consensus 283 D~en~rIGFA~s~C~~~~~ 301 (507)
|++++|||||+++|....+
T Consensus 362 D~~~~rIGfA~~~c~~~~~ 380 (402)
T 3vf3_A 362 DRARKRIGFAVSACHVHDE 380 (402)
T ss_dssp EGGGTEEEEEEETTCCBCS
T ss_pred ECCCCEEEEEecccCcccC
Confidence 9999999999999997643
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=3.1e-38 Score=337.17 Aligned_cols=300 Identities=21% Similarity=0.321 Sum_probs=223.8
Q ss_pred CCcccccCCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-
Q 010546 2 SNTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY- 70 (507)
Q Consensus 2 SSTy~~v~C~~~C~C~~----------~~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~- 70 (507)
.|+.-||.|..-|.|.. ....|.|.++|++|+. +|.+++|+|+|++...+. ..+.|+|+....+.+.
T Consensus 96 GSs~lWV~~~~cc~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~~-~~~~~~~~~~~~~~~~~ 173 (455)
T 3lpj_A 96 GSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-VRANIAAITESDKFFIN 173 (455)
T ss_dssp TCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-EEEEEEEEEEEESCSCT
T ss_pred CCcceEEecccccccCCcccCCCCCCcccCCccEEEEeCCeEE-EEEEEEEEEEECCCccee-eEEEEEEEEccCccccc
Confidence 36667888876453322 1237899999999985 999999999998632122 2467899887776554
Q ss_pred CCCcceEEeecCCCC--------CHHHHHHHcCCCCccEEEeecCC----------CCCCceEEeCCCCCCCC-ceeeec
Q 010546 71 TQRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPPD-MVFSHS 131 (507)
Q Consensus 71 ~~~~DGILGLG~~~~--------S~l~qL~~qglI~~~FSl~L~~~----------~~~~G~L~fGgvD~s~~-~~~~~~ 131 (507)
....|||||||++.+ +++++|+++++|+++||+||++. ....|.|+|||+|++++ ..+.|.
T Consensus 174 ~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~ 253 (455)
T 3lpj_A 174 GSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYT 253 (455)
T ss_dssp TCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEE
T ss_pred CCCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEE
Confidence 356899999999653 58999999999988899999753 24579999999999873 445555
Q ss_pred CCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCC-CCCccccc
Q 010546 132 DPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGP-DPNYDDIC 210 (507)
Q Consensus 132 ~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~-~~~~~~~C 210 (507)
+.....+|.|.+++|.|+++.+.++...+. ...++|||||++++||++++++|.++|.+.... ...... ...+..+|
T Consensus 254 p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~g~~~~C 331 (455)
T 3lpj_A 254 PIRREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVC 331 (455)
T ss_dssp ECCSBTTBBCCEEEEEETTEECCCCGGGGG-SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT-SCCCHHHHTTCSCEE
T ss_pred ecCCCceeEEEEeEEEECCEEccccccccC-CCeEEEECCCcceeCCHHHHHHHHHHhhhhccc-cccCcccccCcceec
Confidence 555678999999999999999887654332 458999999999999999999999999887531 000000 01235678
Q ss_pred cCCCccccccccCCCCeEEEEECCCe-----EEEeCcCCceEEeeccC--CcEEEEE-EEcCCCCeeecHHHhheEEEEE
Q 010546 211 FSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLGI-FQNSDSTTLLGGIVVRNTLVTY 282 (507)
Q Consensus 211 ~~~~~~~~~~~~~~lP~I~f~f~gg~-----~~~L~p~dYi~~~~~~~--~~~Cl~i-~~~~~~~~ILG~~Flr~~yvVF 282 (507)
+...... +..+|+|+|+|+++. ++.|+|++|+.+..... ...|+++ +...++.||||++|||++|+||
T Consensus 332 ~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvf 407 (455)
T 3lpj_A 332 WQAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVF 407 (455)
T ss_dssp ESTTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEE
T ss_pred ccccCCc----hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEE
Confidence 6543211 246999999995442 69999999999876432 2589973 2223678999999999999999
Q ss_pred ECCCCEEEEEeccCCccc-ccccCCCCC
Q 010546 283 DRGNDKVGFWKTNCSELW-RRLQLPSVP 309 (507)
Q Consensus 283 D~en~rIGFA~s~C~~~~-~~~~~~s~p 309 (507)
|++++|||||+++|.... ..+...++|
T Consensus 408 D~~~~rIGfA~~~c~~~~~~~i~~i~g~ 435 (455)
T 3lpj_A 408 DRARKRIGFAVSACHVHDEFRTAAVEGP 435 (455)
T ss_dssp ETTTTEEEEEEETTCCCCSSCCCEEEEE
T ss_pred ECCCCEEEEEecccccccccCcceecCC
Confidence 999999999999998765 344444443
No 26
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3e-38 Score=339.29 Aligned_cols=264 Identities=23% Similarity=0.397 Sum_probs=205.3
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCCC------HHHHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS------VVDQLVE 93 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S------~l~qL~~ 93 (507)
..|+|+++|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +....+|||||||++.++ ++++|++
T Consensus 108 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~ 183 (478)
T 1qdm_A 108 NGKPAAIQYGTGS-IAGYFSEDSVTVGD---LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIE 183 (478)
T ss_dssp CCCEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTT
T ss_pred CCcEEEEEcCCCC-eEEEEEEEEEEECC---eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHH
Confidence 5799999999987 79999999999998 57889999999987654 334568999999998764 7899999
Q ss_pred cCCCC-ccEEEeecCCC--CCCceEEeCCCCCCCC-ceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEe
Q 010546 94 KGVIS-DSFSLCYGGMD--VGGGAMVLGGITPPPD-MVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (507)
Q Consensus 94 qglI~-~~FSl~L~~~~--~~~G~L~fGgvD~s~~-~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiID 169 (507)
+|+|+ ++||+||++.. ..+|.|+|||+|++++ ..+.|.+.....+|.|.+++|.||++.+.+.. .+..++||
T Consensus 184 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~----~~~~aiiD 259 (478)
T 1qdm_A 184 QGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCA----GGCAAIAD 259 (478)
T ss_dssp TTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTT----TCEEEEEC
T ss_pred CCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecC----CCceEEEc
Confidence 99997 78999998752 3589999999999873 34555544457899999999999999876532 35689999
Q ss_pred cCcceEEechHHHHHHHHHHHHhh----------------------ccc-----------ccccCC--------------
Q 010546 170 SGTTYAYLPGHAFAAFKDALIKET----------------------HVL-----------KRIRGP-------------- 202 (507)
Q Consensus 170 SGTs~i~LP~~v~~~l~~ai~~~~----------------------~~l-----------~~~~~~-------------- 202 (507)
|||+++++|+++|++|.++|.+.. +.. ....+.
T Consensus 260 TGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~ 339 (478)
T 1qdm_A 260 SGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDE 339 (478)
T ss_dssp SSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-------------------
T ss_pred CCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccccc
Confidence 999999999999999999986431 000 000000
Q ss_pred -----CC-------------------------------CccccccCC------CccccccccCCCCeEEEEECCCeEEEe
Q 010546 203 -----DP-------------------------------NYDDICFSG------AGRDVSELSKTFPQVDMVFGNGQKLTL 240 (507)
Q Consensus 203 -----~~-------------------------------~~~~~C~~~------~~~~~~~~~~~lP~I~f~f~gg~~~~L 240 (507)
.. .....|+.. +..+|+.. ..+|+|+|+| +|+.+.|
T Consensus 340 ~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~-gg~~~~l 417 (478)
T 1qdm_A 340 PVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTI-GGKKFAL 417 (478)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEE-TTEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEE-CCEEEEE
Confidence 00 001345432 34677655 6899999999 8999999
Q ss_pred CcCCceEEeeccCCcEEEEEEEcC------CCCeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 241 SPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 241 ~p~dYi~~~~~~~~~~Cl~i~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
+|++|+++...+.+..|++.+... ++.||||+.|||++|+|||++|+|||||++
T Consensus 418 ~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 418 KPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 999999987543346899866532 467999999999999999999999999986
No 27
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.5e-38 Score=323.40 Aligned_cols=260 Identities=13% Similarity=0.208 Sum_probs=203.7
Q ss_pred CcccccCCCC--CCCCCC--------C---CCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCC
Q 010546 3 NTYQALKCNP--DCNCDN--------D---RKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDL 69 (507)
Q Consensus 3 STy~~v~C~~--~C~C~~--------~---~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~ 69 (507)
|+.-|++|.. .|.|.. . .+.|.|+++|++|+.++|.+++|+|+|++ ++++++.|||++.+++.+
T Consensus 36 Ss~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~ 112 (323)
T 1izd_A 36 SADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSSASGDVYKDKVTVGG---VSYDSQAVESAEKVSSEF 112 (323)
T ss_dssp CCCEEECBTTSCHHHHTTCCCBCCCTTCEEEEEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHH
T ss_pred CcceEEecCCCCcccccCCCCCCccccCCccCCCeEEEEcCCCCeEEEEEEEEEEEECC---EEECceEEEEEEeccccc
Confidence 5666787764 233421 1 13699999999998889999999999998 678899999999886644
Q ss_pred C-CCCcceEEeecCCCC---------CHHHHHHHcCCCCccEEEeecCCCCCCceEEeCCCCCCCC-ceeeecCCC-CCC
Q 010546 70 Y-TQRADGIMGLGRGRL---------SVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPPD-MVFSHSDPF-RSP 137 (507)
Q Consensus 70 ~-~~~~DGILGLG~~~~---------S~l~qL~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~~-~~~~~~~~~-~~~ 137 (507)
. ....|||||||++.+ +++++|.++ +-+++||+||.+. ..|.|+|||+|++++ ..+.|.+.. ...
T Consensus 113 ~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~ 189 (323)
T 1izd_A 113 TQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS-LSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQG 189 (323)
T ss_dssp HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-SSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTS
T ss_pred cccCCCceEEecCcccccccCCCCCCCHHHHHHHh-ccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCc
Confidence 3 246899999999654 378999987 3347899999863 579999999999873 344444443 567
Q ss_pred ceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccc
Q 010546 138 YYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRD 217 (507)
Q Consensus 138 ~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~ 217 (507)
+|.|.+++|.|++ .+. ..+..++|||||+++++|++++++|.++|.... .......+..+|+
T Consensus 190 ~w~v~l~~i~v~~-~~~------~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~-----~~~~~g~~~~~C~------ 251 (323)
T 1izd_A 190 FWGFTADGYSIGS-DSS------SDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS-----YDSSQGGYVFPSS------ 251 (323)
T ss_dssp SCEEEESEEEETT-EEE------CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE-----EETTTTEEEEETT------
T ss_pred eEEEEECeEEECC-ccc------CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE-----EcCcCCEEEEECC------
Confidence 9999999999999 442 235689999999999999999999988873211 0111223455673
Q ss_pred cccccCCCCeEEEEECCCeEEEeCcCCceEEeeccCCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 218 VSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 218 ~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
..+|+|+|+| +|.++.|++++|+++.. ++..|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 252 -----~~~P~i~f~f-gg~~~~i~~~~~~~~~~--~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 252 -----ASLPDFSVTI-GDYTATVPGEYISFADV--GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp -----CCCCCEEEEE-TTEEEEECHHHHEEEEC--STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred -----CCCceEEEEE-CCEEEecCHHHeEEecC--CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 3789999999 89999999999998764 267899866654 578999999999999999999999999986
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=327.03 Aligned_cols=289 Identities=23% Similarity=0.380 Sum_probs=213.8
Q ss_pred CcccccCCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-C
Q 010546 3 NTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-T 71 (507)
Q Consensus 3 STy~~v~C~~~C~C~~----------~~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~-~ 71 (507)
|+.-|+.|..-|.|.. ....|.|+++|++|+ ++|.+++|+|+|++.. .....+.|+++....+.+. .
T Consensus 36 Ss~lWv~~~~c~~~~~~f~~~~SsT~~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~-~~~~~~~~~~~~~~~~~~~~~ 113 (383)
T 2ewy_A 36 SSNFAVAGTPHSYIDTYFDTERSSTYRSKGFDVTVKYTQGS-WTGFVGEDLVTIPKGF-NTSFLVNIATIFESENFFLPG 113 (383)
T ss_dssp CCCEEEECSCBTTBSCCCCGGGCTTCEEEEEEEEEECSSCE-EEEEEEEEEEEETTTE-EEEEEEEEEEEEEEESCSCTT
T ss_pred CCceEEecCCCCccccCcccccCccceeCCceEEEEECCcE-EEEEEEEEEEEECCCc-cceeEEEEEEEEeecceeecc
Confidence 5566777764222321 023699999999987 5999999999998742 1222467888876665443 3
Q ss_pred CCcceEEeecCCCC--------CHHHHHHHcCCCCccEEEeecCC-------CCCCceEEeCCCCCCC-CceeeecCCCC
Q 010546 72 QRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM-------DVGGGAMVLGGITPPP-DMVFSHSDPFR 135 (507)
Q Consensus 72 ~~~DGILGLG~~~~--------S~l~qL~~qglI~~~FSl~L~~~-------~~~~G~L~fGgvD~s~-~~~~~~~~~~~ 135 (507)
...|||||||++.+ +++++|++|+.|+++||+||++. ...+|.|+|||+|+++ ...+.|.+...
T Consensus 114 ~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~ 193 (383)
T 2ewy_A 114 IKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE 193 (383)
T ss_dssp CCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS
T ss_pred CcCceEEecCchhcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC
Confidence 46799999999654 48999999999977899999741 2457999999999886 34555555556
Q ss_pred CCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCC-CCccccccCCC
Q 010546 136 SPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPD-PNYDDICFSGA 214 (507)
Q Consensus 136 ~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~-~~~~~~C~~~~ 214 (507)
..+|.|.+++|.|+++.+.++...++ ...++|||||++++||+++|++|.++|.+..... ...... ..+..+|+...
T Consensus 194 ~~~~~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~ 271 (383)
T 2ewy_A 194 EWYYQIEILKLEIGGQSLNLDCREYN-ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIP-EFSDGFWTGSQLACWTNS 271 (383)
T ss_dssp BTTBBCCEEEEEETTEECCCCTTTTT-SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSS-CCCHHHHHTSEEEEECSS
T ss_pred CceEEEEEEEEEECCEEccccccccC-CccEEEEcCCccccCCHHHHHHHHHHHhhhcccc-cCccccccccccccccCC
Confidence 78999999999999999877654342 4589999999999999999999999998765310 000000 12356787532
Q ss_pred ccccccccCCCCeEEEEECCC-----eEEEeCcCCceEEeecc-CCcEEEEE-EEcCCCCeeecHHHhheEEEEEECCCC
Q 010546 215 GRDVSELSKTFPQVDMVFGNG-----QKLTLSPENYLFRHMKV-SGAYCLGI-FQNSDSTTLLGGIVVRNTLVTYDRGND 287 (507)
Q Consensus 215 ~~~~~~~~~~lP~I~f~f~gg-----~~~~L~p~dYi~~~~~~-~~~~Cl~i-~~~~~~~~ILG~~Flr~~yvVFD~en~ 287 (507)
.. .+..+|+|+|+|+++ .++.|+|++|+.+..+. .+..|+++ +...++.||||+.|||++|+|||++++
T Consensus 272 ~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~ 347 (383)
T 2ewy_A 272 ET----PWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQK 347 (383)
T ss_dssp SC----GGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTT
T ss_pred cc----cHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCC
Confidence 21 124799999999543 48999999999986421 35689863 333356899999999999999999999
Q ss_pred EEEEEeccCCcc
Q 010546 288 KVGFWKTNCSEL 299 (507)
Q Consensus 288 rIGFA~s~C~~~ 299 (507)
|||||+++|+..
T Consensus 348 rIGfA~~~c~~~ 359 (383)
T 2ewy_A 348 RVGFAASPCAEI 359 (383)
T ss_dssp EEEEEECTTCBS
T ss_pred eEEEEeccCCCc
Confidence 999999999864
No 29
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.4e-38 Score=323.37 Aligned_cols=260 Identities=14% Similarity=0.253 Sum_probs=202.7
Q ss_pred CcccccCCCC--CCCCCCC-----------CCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCC
Q 010546 3 NTYQALKCNP--DCNCDND-----------RKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDL 69 (507)
Q Consensus 3 STy~~v~C~~--~C~C~~~-----------~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~ 69 (507)
|+.-|++|.. .|.|... .+.|.|+++|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+
T Consensus 36 Ss~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~ 112 (323)
T 1bxo_A 36 SADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSSASGNVFTDSVTVGG---VTAHGQAVQAAQQISAQF 112 (323)
T ss_dssp CCCEEECBTTSCHHHHTTSCCBCHHHHCEEEEEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHH
T ss_pred CcceEEecCCCCchhccCCCCCCcccCCcccCCCeEEEEeCCCCeEEEEEEEEEEEECC---EEECcEEEEEEEecCccc
Confidence 5566787764 2334320 14699999999998889999999999998 578899999999876654
Q ss_pred CC-CCcceEEeecCCCC---------CHHHHHHHcCCCCccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCC-CCC
Q 010546 70 YT-QRADGIMGLGRGRL---------SVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSP 137 (507)
Q Consensus 70 ~~-~~~DGILGLG~~~~---------S~l~qL~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~-~~~ 137 (507)
.. ...|||||||++.+ +++++|+++ +-+++||+||.+ ..+|.|+|||+|+++ ...+.|.+.. ...
T Consensus 113 ~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~-i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~ 189 (323)
T 1bxo_A 113 QQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS-LAQPLFAVALKH--QQPGVYDFGFIDSSKYTGSLTYTGVDNSQG 189 (323)
T ss_dssp HTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG-BSSSEEEEECCS--SSCEEEEESSCCGGGBSSCCEEEECBCTTS
T ss_pred ccCCCCceEEEeCcccccccccCCCCCHHHHHHHh-cCCcEEEEEEeC--CCCceEEEeCcChhhccCceEEEECCCCCC
Confidence 33 46899999999643 488999987 334789999986 357999999999986 3344444332 467
Q ss_pred ceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccc
Q 010546 138 YYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRD 217 (507)
Q Consensus 138 ~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~ 217 (507)
+|.|.+++|.|++ +. ..+..++|||||+++++|++++++|.++|..... ......+..+|+
T Consensus 190 ~w~v~l~~i~v~~--~~------~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~------ 250 (323)
T 1bxo_A 190 FWSFNVDSYTAGS--QS------GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ-----DSNAGGYVFDCS------ 250 (323)
T ss_dssp SCEEEEEEEEETT--EE------EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEECTT------
T ss_pred eEEEEEeeEEECC--cc------CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE-----cCcCCEEEEECC------
Confidence 9999999999999 21 1345899999999999999999999888732111 112223455673
Q ss_pred cccccCCCCeEEEEECCCeEEEeCcCCceEEeeccCCcEEEEEEEcC--CCCeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 218 VSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 218 ~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
..+|+|+|+| +|.++.|++++|+++... +...|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 251 -----~~~P~i~f~f-gg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 251 -----TNLPDFSVSI-SGYTATVPGSLINYGPSG-DGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp -----CCCCCEEEEE-TTEEEEECHHHHEEEECS-SSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred -----CCCceEEEEE-CCEEEEECHHHeEEeccC-CCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 3789999999 899999999999987643 246899976654 568999999999999999999999999986
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.3e-37 Score=326.23 Aligned_cols=291 Identities=22% Similarity=0.320 Sum_probs=214.0
Q ss_pred CcccccCCCCCCCCCC------C----CCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-C
Q 010546 3 NTYQALKCNPDCNCDN------D----RKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-T 71 (507)
Q Consensus 3 STy~~v~C~~~C~C~~------~----~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~-~ 71 (507)
|+.-|+.|..-|.|.. . ...|.|+++|++|+. +|.+++|+|+|++...+. ..+.|+++....+.+. .
T Consensus 44 Ss~lWv~~~~c~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~-~~~~~~~~~~~~~~f~~~ 121 (395)
T 2qp8_A 44 SSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-VRANIAAITESDKFFING 121 (395)
T ss_dssp CCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-EEEEEEEEEEEESCSCTT
T ss_pred CCceEEECCCCccccCCcCcccCCCceeCCceEEEEECCcEE-EEEEEeEEEEECCCCCce-EEEEEEEEEccCcccccc
Confidence 5666787764222221 1 136999999999975 999999999998421122 2367888876655443 3
Q ss_pred CCcceEEeecCCCC--------CHHHHHHHcCCCCccEEEeecCC----------CCCCceEEeCCCCCCCC-ceeeecC
Q 010546 72 QRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPPD-MVFSHSD 132 (507)
Q Consensus 72 ~~~DGILGLG~~~~--------S~l~qL~~qglI~~~FSl~L~~~----------~~~~G~L~fGgvD~s~~-~~~~~~~ 132 (507)
...|||||||++.+ +++++|++|+.|+++||+||++. ...+|.|+|||+|++++ ..+.|.+
T Consensus 122 ~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p 201 (395)
T 2qp8_A 122 SNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTP 201 (395)
T ss_dssp CCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEE
T ss_pred cCccceEEcCchhhccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEec
Confidence 56899999999654 58999999999988899999863 13579999999998863 3455555
Q ss_pred CCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccC
Q 010546 133 PFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFS 212 (507)
Q Consensus 133 ~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~ 212 (507)
.....+|.|.+++|.|+++.+.++...++ ...++|||||++++||+++|++|.++|.+.........+....+..+|+.
T Consensus 202 ~~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~ 280 (395)
T 2qp8_A 202 IRREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQ 280 (395)
T ss_dssp CCSBTTBBCCEEEEEETTEECCCCGGGGG-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEES
T ss_pred cCCCceEEEEEEEEEECCEEcccCccccC-CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccc
Confidence 55678999999999999998877654443 35799999999999999999999999987653110000000112467865
Q ss_pred CCccccccccCCCCeEEEEECCC-----eEEEeCcCCceEEeecc--CCcEEEE-EEEcCCCCeeecHHHhheEEEEEEC
Q 010546 213 GAGRDVSELSKTFPQVDMVFGNG-----QKLTLSPENYLFRHMKV--SGAYCLG-IFQNSDSTTLLGGIVVRNTLVTYDR 284 (507)
Q Consensus 213 ~~~~~~~~~~~~lP~I~f~f~gg-----~~~~L~p~dYi~~~~~~--~~~~Cl~-i~~~~~~~~ILG~~Flr~~yvVFD~ 284 (507)
.... .+..+|+|+|+|+++ .++.|+|++|+.+.... ....|++ .+...++.||||+.|||++|+|||+
T Consensus 281 ~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~ 356 (395)
T 2qp8_A 281 AGTT----PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDR 356 (395)
T ss_dssp TTCC----CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEET
T ss_pred cccc----hHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEEC
Confidence 3211 224799999999554 37999999999986531 2358974 3333357899999999999999999
Q ss_pred CCCEEEEEeccCCccc
Q 010546 285 GNDKVGFWKTNCSELW 300 (507)
Q Consensus 285 en~rIGFA~s~C~~~~ 300 (507)
+++|||||+++|....
T Consensus 357 ~~~rIGfA~~~c~~~~ 372 (395)
T 2qp8_A 357 ARKRIGFAVSACHVHD 372 (395)
T ss_dssp TTTEEEEEEETTCCCC
T ss_pred CCCEEEEEeccCCCCC
Confidence 9999999999999643
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-37 Score=319.52 Aligned_cols=266 Identities=18% Similarity=0.272 Sum_probs=205.4
Q ss_pred CcccccCCCCCCCCCC--CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEee
Q 010546 3 NTYQALKCNPDCNCDN--DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGL 80 (507)
Q Consensus 3 STy~~v~C~~~C~C~~--~~~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGL 80 (507)
|+.-|+.|.+..++.. ....|.|+++|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+ + ...||||||
T Consensus 35 Ss~lWv~~~~~y~~s~Ss~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~---~~v~~~~fg~~~~~~~-~--~~~~GilGL 107 (340)
T 1wkr_A 35 SSNTWLGADKSYVKTSTSSATSDKVSVTYGSGS-FSGTEYTDTVTLGS---LTIPKQSIGVASRDSG-F--DGVDGILGV 107 (340)
T ss_dssp CCCCEECSSSCCCCCTTCEEEEEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEES-C--TTCSEEEEC
T ss_pred ChhheecCCCccCCcCCccccCceEEEEECCcE-EEEEEEEEEEEECC---EEEcceEEEEEEccCC-C--cCCCcEEEC
Confidence 5666788875333322 134799999999997 79999999999998 6888999999998765 3 258999999
Q ss_pred cCCCC--------------CHHHHHHHcCCCC-ccEEEeecCC---CCCCceEEeCCCCCCCC-ceeeecCCCC----CC
Q 010546 81 GRGRL--------------SVVDQLVEKGVIS-DSFSLCYGGM---DVGGGAMVLGGITPPPD-MVFSHSDPFR----SP 137 (507)
Q Consensus 81 G~~~~--------------S~l~qL~~qglI~-~~FSl~L~~~---~~~~G~L~fGgvD~s~~-~~~~~~~~~~----~~ 137 (507)
|++.+ +++++|+++|+|+ ++||+||.+. ....|.|+|||+|++++ ..+.|.+... ..
T Consensus 108 g~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~ 187 (340)
T 1wkr_A 108 GPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASA 187 (340)
T ss_dssp SCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGG
T ss_pred CccccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcc
Confidence 98653 4799999999997 7799999864 23479999999998762 3444443333 57
Q ss_pred ceEEEEeEEEEcC-EeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCcc
Q 010546 138 YYNIELKELRVAG-KPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGR 216 (507)
Q Consensus 138 ~w~V~l~sI~Vgg-~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~ 216 (507)
+|.|. ++|.|++ +.+.. +..++|||||++++||++++++|.+++.+... .....+..+|.
T Consensus 188 ~w~v~-~~i~v~~~~~l~~-------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~------~~~g~~~~~C~----- 248 (340)
T 1wkr_A 188 YWGIN-QSIRYGSSTSILS-------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD------NNTGLLRLTTA----- 248 (340)
T ss_dssp SSEEE-EEEEETTTEEEEE-------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC------TTTSSEEECHH-----
T ss_pred eEEEE-eeEEECCCeEccC-------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc------CCCCeEEeecc-----
Confidence 89999 9999998 77641 24799999999999999999999888854432 11223445563
Q ss_pred ccccccCCCCeEEEEECCCeEEEeCcCCceEEeecc-----CCcEEEEEEEc-C-----CCCeeecHHHhheEEEEEECC
Q 010546 217 DVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV-----SGAYCLGIFQN-S-----DSTTLLGGIVVRNTLVTYDRG 285 (507)
Q Consensus 217 ~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~-----~~~~Cl~i~~~-~-----~~~~ILG~~Flr~~yvVFD~e 285 (507)
.. ..+|+|+|+| +|.++.|+|++|+.+.... ....|+..+.. . +..||||++|||++|+|||++
T Consensus 249 ---~~-~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~ 323 (340)
T 1wkr_A 249 ---QY-ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTT 323 (340)
T ss_dssp ---HH-HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETT
T ss_pred ---cc-ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCC
Confidence 22 4789999999 8899999999999865421 12456554433 1 246999999999999999999
Q ss_pred CCEEEEEeccCCcc
Q 010546 286 NDKVGFWKTNCSEL 299 (507)
Q Consensus 286 n~rIGFA~s~C~~~ 299 (507)
++|||||+++|...
T Consensus 324 ~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 324 NKRLGLATTSFTTA 337 (340)
T ss_dssp TTEEEEEECTTTTC
T ss_pred CCeEEEEecCCCCC
Confidence 99999999999864
No 32
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=7.7e-38 Score=333.74 Aligned_cols=243 Identities=20% Similarity=0.276 Sum_probs=201.8
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEe----ecCCCCCCCcceEEeecCCCC------CHHHH
Q 010546 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQ 90 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~----~s~~~~~~~~DGILGLG~~~~------S~l~q 90 (507)
..|.|.+.|++|+ ++|.+++|+|++++ ++++ +.|||++. +++ +.....|||||||++.+ +++++
T Consensus 192 ~~~~f~i~YgdGs-~~G~~~~Dtv~igg---~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~ 265 (451)
T 3qvc_A 192 DDTPVKLTSKAGT-ISGIFSKDLVTIGK---LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVE 265 (451)
T ss_dssp EEEEEEEECSSEE-EEEEEEEEEEEETT---EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHH
T ss_pred CCCEEEEEECCCE-EEEEEEEEEEEECC---EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHH
Confidence 4689999999998 89999999999998 5777 99999988 555 44456899999999764 58999
Q ss_pred HHHcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEE
Q 010546 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (507)
Q Consensus 91 L~~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiI 168 (507)
|+++|+|+ +.||+||++.+..+|.|+|||+|+++ ...+.|.+.....+|.|.++ |.|+++ . ..+..++|
T Consensus 266 L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~-~-------~~~~~aii 336 (451)
T 3qvc_A 266 LKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV-S-------SKKANVIL 336 (451)
T ss_dssp HHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE-E-------EEEEEEEE
T ss_pred HHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc-c-------CCCceEEE
Confidence 99999997 67999999876668999999999987 34555665567889999999 999998 1 12458999
Q ss_pred ecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEE
Q 010546 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (507)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~ 248 (507)
||||+++++|++++++|.+++.+... .....+..+| + ...+|+|+|+| +|.+++|+|++|+.+
T Consensus 337 DSGTt~i~lP~~~~~~i~~~i~a~~~------~~~g~y~v~C--------~--~~~~P~itf~f-gg~~i~lp~~~yi~~ 399 (451)
T 3qvc_A 337 DSATSVITVPTEFFNQFVESASVFKV------PFLSLYVTTC--------G--NTKLPTLEYRS-PNKVYTLEPKQYLEP 399 (451)
T ss_dssp CTTBSSEEECHHHHHHHHTTTTCEEC------TTSSCEEEET--------T--CTTCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCccccCCHHHHHHHHHHcCCeec------CCCCeEEeeC--------C--cCcCCcEEEEE-CCEEEEEcHHHheee
Confidence 99999999999999999988854321 1123455566 3 25899999999 899999999999998
Q ss_pred eeccCCcEEEEEEEcC---CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 249 HMKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 249 ~~~~~~~~Cl~i~~~~---~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
.....+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 400 ~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 400 LENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7543457899877765 3679999999999999999999999999984
No 33
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.2e-37 Score=330.17 Aligned_cols=242 Identities=23% Similarity=0.304 Sum_probs=198.2
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeec--CC-CCCCCcceEEeecCCCC------CHHHHHH
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLET--GD-LYTQRADGIMGLGRGRL------SVVDQLV 92 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s--~~-~~~~~~DGILGLG~~~~------S~l~qL~ 92 (507)
.|.|+++|++|+ ++|.+++|+|++++ +++. +.|||++.++ +. +.....|||||||++.+ +++++|+
T Consensus 194 ~~~~~i~YgdGs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~ 268 (453)
T 2bju_A 194 GTKVEMNYVSGT-VSGFFSKDLVTVGN---LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELK 268 (453)
T ss_dssp EEEEEEECSSSE-EEEEEEEEEEEETT---EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHH
T ss_pred CcEEEEEcCCCC-eEEEEEEEEEEEeC---cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHH
Confidence 589999999998 69999999999998 5777 9999999887 54 33456899999999754 5899999
Q ss_pred HcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEec
Q 010546 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (507)
Q Consensus 93 ~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDS 170 (507)
++|+|+ ++||+||++.+..+|.|+|||+|+++ ...+.|.+.....+|.|.++ |.|+++ + . .+..++|||
T Consensus 269 ~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg~-~-~------~~~~aIiDS 339 (453)
T 2bju_A 269 NQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGNI-M-L------EKANCIVDS 339 (453)
T ss_dssp HTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETTE-E-E------EEEEEEECT
T ss_pred HCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECcE-E-e------ccccEEEcC
Confidence 999997 78999999865568999999999986 34455554455689999999 999993 3 1 245899999
Q ss_pred CcceEEechHHHHHHHHHHHHhhcccccccCCCC-CccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEe
Q 010546 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDP-NYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (507)
Q Consensus 171 GTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~-~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~ 249 (507)
||+++++|++++++|.+++.+.. .... .+..+|+. ..+|+|+|+| +|.+++|+|++|+.+.
T Consensus 340 GTsl~~lP~~~~~~l~~~i~~~~-------~~~g~~~~v~C~~----------~~~P~itf~f-gg~~~~l~~~~yi~~~ 401 (453)
T 2bju_A 340 GTSAITVPTDFLNKMLQNLDVIK-------VPFLPFYVTLCNN----------SKLPTFEFTS-ENGKYTLEPEYYLQHI 401 (453)
T ss_dssp TCCSEEECHHHHHHHTTTSSCEE-------CTTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECHHHHEEEC
T ss_pred CCCeEecCHHHHHHHHHHhCCcc-------cCCCceEEEecCC----------CCCCcEEEEE-CCEEEEECHHHhEeec
Confidence 99999999999999988874421 1122 45667742 4799999999 8999999999999987
Q ss_pred eccCCcEEEEEEEcC---CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 250 MKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 250 ~~~~~~~Cl~i~~~~---~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
...++..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 402 ~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 402 EDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp TTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 532356899766654 3589999999999999999999999999984
No 34
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=5.7e-36 Score=293.07 Aligned_cols=222 Identities=24% Similarity=0.429 Sum_probs=180.0
Q ss_pred ccccceEEEEEEeecCC-CCCCCcceEEeecCCCC------CHHHHHHHcCCCC-ccEEEeecCCCCC--CceEEeCCCC
Q 010546 52 LVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEKGVIS-DSFSLCYGGMDVG--GGAMVLGGIT 121 (507)
Q Consensus 52 i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~l~qL~~qglI~-~~FSl~L~~~~~~--~G~L~fGgvD 121 (507)
++++++.|||++.+++. +.....|||||||++.+ +++++|+++|+|. ++||+||++.... +|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 57789999999988765 44567899999999765 4899999999997 7799999986433 8999999999
Q ss_pred CCCC-ceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhccccccc
Q 010546 122 PPPD-MVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR 200 (507)
Q Consensus 122 ~s~~-~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~ 200 (507)
++++ ..+.|.+.....+|.|.+++|.|+++.+. ...+..++|||||+++++|++++++|.+++.+...
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-----~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------ 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-----CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL------ 151 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEe-----ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec------
Confidence 9863 45555555567899999999999998652 12356899999999999999999999999854321
Q ss_pred CCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEeeccCCcEEEEEEEcC------CCCeeecHHH
Q 010546 201 GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIV 274 (507)
Q Consensus 201 ~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~------~~~~ILG~~F 274 (507)
....+..+|+. . +.+|+|+|+| +|.+++|+|++|+++....++..|+..+... .+.||||++|
T Consensus 152 -~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 220 (241)
T 1lya_B 152 -IQGEYMIPCEK--------V-STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVF 220 (241)
T ss_dssp -ETTEEEEEGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHH
T ss_pred -cCCcEEEECCC--------C-ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHH
Confidence 12235566742 2 5799999999 8999999999999987543356899755542 4689999999
Q ss_pred hheEEEEEECCCCEEEEEecc
Q 010546 275 VRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 275 lr~~yvVFD~en~rIGFA~s~ 295 (507)
||++|+|||++++|||||+++
T Consensus 221 l~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 221 IGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999863
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.92 E-value=5.2e-25 Score=215.65 Aligned_cols=161 Identities=21% Similarity=0.304 Sum_probs=135.0
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCcceEEeecCCCCC--HHHHHHHcCCCC
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS--VVDQLVEKGVIS 98 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S--~l~qL~~qglI~ 98 (507)
.|.|++.|++|+ ++|.+++|+|+|++ +++.++.|||+.++.+. +....+|||||||++.++ ++++|+++|+|.
T Consensus 70 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~ 145 (239)
T 1b5f_A 70 GTFGAIIYGTGS-ITGFFSQDSVTIGD---LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVK 145 (239)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCS
T ss_pred CcEEEEEECCCc-EEEEEEEEEEEECC---cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCC
Confidence 589999999987 69999999999998 57889999999887653 445578999999999876 789999999997
Q ss_pred -ccEEEeecCC--CCCCceEEeCCCCCCCC-ceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcce
Q 010546 99 -DSFSLCYGGM--DVGGGAMVLGGITPPPD-MVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTY 174 (507)
Q Consensus 99 -~~FSl~L~~~--~~~~G~L~fGgvD~s~~-~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~ 174 (507)
++||+||.+. ....|.|+|||+|++++ ..+.|.+.....+|.|.+++|.|+++.+.+.. .+..++|||||++
T Consensus 146 ~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~----~~~~aiiDTGTt~ 221 (239)
T 1b5f_A 146 ERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCA----PGCQAFADSGTSL 221 (239)
T ss_dssp SSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTT----TCEEEEECTTCSS
T ss_pred CCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccC----CCCEEEEecCcch
Confidence 7799999874 24579999999999863 34445444456799999999999999876543 3468999999999
Q ss_pred EEechHHHHHHHHHHH
Q 010546 175 AYLPGHAFAAFKDALI 190 (507)
Q Consensus 175 i~LP~~v~~~l~~ai~ 190 (507)
++||++++++|.++|.
T Consensus 222 ~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 222 LSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEECHHHHHHHHHHTT
T ss_pred hhCCHHHHHHHHHHhC
Confidence 9999999999999874
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.62 E-value=8.9e-16 Score=126.90 Aligned_cols=72 Identities=28% Similarity=0.529 Sum_probs=62.5
Q ss_pred CCCCeEEEEECCCeEEEeCcCCceEEeeccCCcEEEEEEEcC-----CCCeeecHHHhheEEEEEECCCCEEEEEecc
Q 010546 223 KTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS-----DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (507)
Q Consensus 223 ~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~-----~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~ 295 (507)
+++|+|+|+| +|.+++|+|++|+.+.....+..|++.+.+. .+.||||+.|||++|+|||++++|||||+++
T Consensus 11 ~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 11 SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 5799999999 8999999999999987543356899876652 4579999999999999999999999999863
No 37
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=95.71 E-value=0.0066 Score=50.49 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=24.2
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCC
Q 010546 22 ECIYERRYAEMSTSSGVLGVDVISFGN 48 (507)
Q Consensus 22 ~C~y~i~Y~dgs~~sG~l~~D~vsig~ 48 (507)
.|.|.+.|++|+ ++|.+++|+|+|++
T Consensus 71 ~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 699999999998 79999999999987
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.99 E-value=0.11 Score=46.44 Aligned_cols=112 Identities=19% Similarity=0.292 Sum_probs=63.6
Q ss_pred CceEEEEeEEEEcCEeeecCCceecCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCcc
Q 010546 137 PYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGR 216 (507)
Q Consensus 137 ~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~ 216 (507)
..+.|+ +.|||+.+ .++||||++.+.++.+..+++- +..... .+..+ .. .+.+
T Consensus 23 ~~l~v~---~~Ing~~v-----------~~LVDTGAs~s~Is~~~A~rlG--L~~~~~--~~~~~------~a--~g~G- 75 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPL-----------KAFVDSGAQMTIMSQACAERCN--IMRLVD--RRWAG------VA--KGVG- 75 (148)
T ss_dssp CCCEEE---EEETTEEE-----------EEEECTTCSSCEEEHHHHHHTT--CGGGEE--GGGCE------EC--CC---
T ss_pred CEEEEE---EEECCEEE-----------EEEEeCCCCcEeeCHHHHHHcC--CccccC--cceeE------EE--EcCC-
Confidence 344444 45788866 5899999999999999887762 100000 00000 00 0000
Q ss_pred ccccccCCCCeEEEEECCCeEEEeCcCCceEEeeccCCcEEEEE-EEcCCCCeeecHHHhheEEEEEECCCCEEEEEec
Q 010546 217 DVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGI-FQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 217 ~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~~~~~~~Cl~i-~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
-.......+...+.+ ++..+. |-.. +...+-..+||..||+++-.+.|++++++-|...
T Consensus 76 -~~~~~g~v~~~~I~I-g~~~~~-----------------~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 76 -TQRIIGRVHLAQIQI-EGDFLQ-----------------CSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp --CEEEEEEEEEEEEE-TTEEEE-----------------EEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred -ccEEEEEEEEEEEEE-CCEEEE-----------------EEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 000001233445555 443321 2222 2222445899999999999999999999998654
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.76 E-value=0.25 Score=43.54 Aligned_cols=27 Identities=15% Similarity=0.163 Sum_probs=24.8
Q ss_pred CCeeecHHHhheEEEEEECCCCEEEEE
Q 010546 266 STTLLGGIVVRNTLVTYDRGNDKVGFW 292 (507)
Q Consensus 266 ~~~ILG~~Flr~~yvVFD~en~rIGFA 292 (507)
...+||..||+++-.++|+.++++-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 348999999999999999999999995
No 40
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.52 E-value=0.14 Score=36.26 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=21.1
Q ss_pred eeeehhhhHHHH-HHHHHHHHhHhhhhhhhhhcc
Q 010546 454 RNLVAVVVGIVV-TLLLGLSILGLWSVWKRRQEA 486 (507)
Q Consensus 454 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 486 (507)
.+.-+++.||+. .+++.+.++++|+.||||.+.
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 345566767666 334445567788888888664
No 41
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.19 E-value=0.22 Score=35.24 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=18.2
Q ss_pred ehhhhHHHH-HHHHHHHHhHhhhhhhhhhccc
Q 010546 457 VAVVVGIVV-TLLLGLSILGLWSVWKRRQEAS 487 (507)
Q Consensus 457 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 487 (507)
-+++.|++. .+++.+.++++|+.||||++..
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 345555554 3333445566788888876543
No 42
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=86.35 E-value=0.38 Score=33.18 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=17.7
Q ss_pred eeeeehhhhHHHHHHHHHH-HHhHhhhhhhhh
Q 010546 453 QRNLVAVVVGIVVTLLLGL-SILGLWSVWKRR 483 (507)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 483 (507)
+.+...++.+++..+++=+ ..++.|++||||
T Consensus 9 ~~~~~~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 9 GSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp CCSSTHHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred CCceEEEEeehhHHHHHHHHHHHHheeEeeec
Confidence 4555566666665555533 344466777765
No 43
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=77.65 E-value=1.5 Score=29.96 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=13.2
Q ss_pred hHHHHHHHHHH--HHhHhhhhhhhh
Q 010546 461 VGIVVTLLLGL--SILGLWSVWKRR 483 (507)
Q Consensus 461 ~~~~~~~~~~~--~~~~~~~~~~~~ 483 (507)
.|+++..++|+ .+..+||.||||
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeehHHHHHHHHHHHHHHHHeecC
Confidence 35555555443 344467788876
No 44
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=71.06 E-value=3.3 Score=29.14 Aligned_cols=8 Identities=50% Similarity=0.397 Sum_probs=3.2
Q ss_pred hhhhhhhh
Q 010546 477 WSVWKRRQ 484 (507)
Q Consensus 477 ~~~~~~~~ 484 (507)
++.||||+
T Consensus 32 ~~~~RRR~ 39 (44)
T 2jwa_A 32 GILIKRRQ 39 (44)
T ss_dssp HHHHHHHC
T ss_pred Hhheehhh
Confidence 33344443
No 45
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=64.12 E-value=5.6 Score=26.39 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=8.9
Q ss_pred Hhhhhhhhhhcc
Q 010546 475 GLWSVWKRRQEA 486 (507)
Q Consensus 475 ~~~~~~~~~~~~ 486 (507)
|.|+.||-|..-
T Consensus 25 ~tflywrgrrhh 36 (40)
T 2l9u_A 25 GTFLYWRGRRHH 36 (40)
T ss_dssp HHHHHHHHHHHC
T ss_pred ceeEEEcccccc
Confidence 478899988654
No 46
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=52.00 E-value=27 Score=31.39 Aligned_cols=50 Identities=14% Similarity=0.302 Sum_probs=40.8
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+|+-| ++.+-...+.|.||..+.-+.||.-|+++.+||.+---|+.+
T Consensus 93 ~G~~i~Nv--D~tii~q~PKl~p~~~~m~~~la~~L~~~~~~V~vKAtT~E~ 142 (162)
T 3re3_A 93 KQYSISNI--DCTIIAQAPKMLPHIEKMRACLANILEIQISQINIKATTTER 142 (162)
T ss_dssp TTCEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTSCGGGEEEEEECCSS
T ss_pred cCCEEEEE--EEEEEcCCCcchhHHHHHHHHHHHHHCCCCceEEEEEecCCC
Confidence 35667666 455567889999999999999999999999999987666554
No 47
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=51.88 E-value=27 Score=31.01 Aligned_cols=50 Identities=12% Similarity=0.207 Sum_probs=41.4
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+|+-|-.. +=...+.|.||..+.-+.||.-|+++.+||.+---|+.+
T Consensus 87 ~G~~i~NvD~t--ii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 136 (152)
T 1iv3_A 87 RGAKLLQASLV--LTLDRPKLGPHRKALVDSLSRLMRLPQDRIGLTFKTSEG 136 (152)
T ss_dssp TTCCEEEEEEE--EECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEEE--EEecCCcCHHHHHHHHHHHHHHhCCCCceEEEEEecCCC
Confidence 45677776444 455889999999999999999999999999988777665
No 48
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=51.30 E-value=28 Score=31.22 Aligned_cols=50 Identities=16% Similarity=0.273 Sum_probs=40.8
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+|+-|-..+ =...+.|.||..+.-+.||.-|+++.+||.+---|+.|
T Consensus 90 ~G~~i~NvD~ti--i~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 139 (160)
T 2pmp_A 90 AGYEIGNLDATL--ILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEK 139 (160)
T ss_dssp HTEEEEEEEEEE--ECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEEEE--EecCCcCHHHHHHHHHHHHHHHCCCcceEEEEEecCCC
Confidence 457777775444 45899999999999999999999999999986666554
No 49
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=50.63 E-value=30 Score=31.01 Aligned_cols=50 Identities=16% Similarity=0.341 Sum_probs=40.7
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+|+-|-+.++ ...+.|.||..+.-+.||.-|+++.+||.+---|+.|
T Consensus 88 ~G~~i~NvD~tii--~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 137 (160)
T 1gx1_A 88 KGYTLGNVDVTII--AQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEK 137 (160)
T ss_dssp TTCEEEEEEEEEE--CSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEEEEE--cCCCcchHHHHHHHHHHHHHhCCCCceEEEEEccCCC
Confidence 4567777755444 7899999999999999999999999999996555543
No 50
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=50.60 E-value=8.8 Score=29.28 Aligned_cols=36 Identities=33% Similarity=0.412 Sum_probs=16.3
Q ss_pred hheeeeehhhhHHHHHHHHHHHHhHhh-hh--hhhhhccc
Q 010546 451 WWQRNLVAVVVGIVVTLLLGLSILGLW-SV--WKRRQEAS 487 (507)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 487 (507)
||.+-.+.+++|-.+. ++.+..++|+ -+ |+||+||+
T Consensus 4 ~~~~p~~LivlGg~~~-lll~~glcI~ccvkcrhRrrqAe 42 (70)
T 2klu_A 4 VPRGSMALIVLGGVAG-LLLFIGLGIFFSVRSRHRRRQAE 42 (70)
T ss_dssp SCCCSSHHHHHHHHHH-HHHHHHHHHHHHHHSSCCSSSCT
T ss_pred chhhHHHHHHHhHHHH-HHHHHHHHHHHhhHHHHHHHHHH
Confidence 4444444345443333 2333444454 33 55555655
No 51
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=50.41 E-value=31 Score=30.93 Aligned_cols=50 Identities=14% Similarity=0.401 Sum_probs=41.5
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+|+-|-+.+. ...+.|.||..+.-+.||.-|+++.+||.+---|+.|
T Consensus 89 ~G~~i~NvD~tii--~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 138 (159)
T 1t0a_A 89 KGFELGNLDVTII--AQAPKMAPHIEDMRQVLAADLNADVADINVKATTTEK 138 (159)
T ss_dssp TTEEEEEEEEEEE--CSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEEEEE--cCCCcChHHHHHHHHHHHHHhCCCCceEEEEEecCCC
Confidence 4677877755444 7899999999999999999999999999987666553
No 52
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=49.73 E-value=8 Score=25.83 Aligned_cols=12 Identities=25% Similarity=0.227 Sum_probs=7.4
Q ss_pred HHhHhhhhhhhh
Q 010546 472 SILGLWSVWKRR 483 (507)
Q Consensus 472 ~~~~~~~~~~~~ 483 (507)
.++++.+.||||
T Consensus 23 i~l~~~~~iRRr 34 (35)
T 1iij_A 23 LVVVVGILIKRR 34 (35)
T ss_dssp HTTTTTHHHHHC
T ss_pred HHHHhheEEeec
Confidence 344566777766
No 53
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=46.20 E-value=36 Score=31.11 Aligned_cols=50 Identities=16% Similarity=0.253 Sum_probs=41.0
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+|+-| ++.+-...+.|.||..+.-+.||.-|+++.+||.+---|+.+
T Consensus 110 ~G~~I~Nv--D~tIiaq~PKl~p~~~~mr~~la~~L~i~~~~VnVKATT~E~ 159 (183)
T 3f0d_A 110 AGFAIRNV--DSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEK 159 (183)
T ss_dssp TTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEE--EEEEEcCCCcchhHHHHHHHHHHHHHCCCcceEEEEEecCCC
Confidence 45667766 555567789999999999999999999999999987666554
No 54
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=45.14 E-value=13 Score=29.38 Aligned_cols=24 Identities=29% Similarity=0.768 Sum_probs=12.5
Q ss_pred eeehhhhHHHHH-HHHHHHHhHhhhhhh
Q 010546 455 NLVAVVVGIVVT-LLLGLSILGLWSVWK 481 (507)
Q Consensus 455 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 481 (507)
+.+++++|++.. +++||. ++++||
T Consensus 9 n~~~Iv~gvi~gilliGll---llliwk 33 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLA---ALLIWK 33 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHH---HHHHHH
T ss_pred CchhhHHHHHHHHHHHHHH---HHHHHH
Confidence 455666665554 334433 456665
No 55
>3b6n_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; malaria isoprenoid biosynthesis and prenylation pathways ISPF; 2.26A {Plasmodium vivax sai-1}
Probab=37.64 E-value=47 Score=30.45 Aligned_cols=50 Identities=14% Similarity=0.196 Sum_probs=41.4
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
...+||-|-+.+ =...+.|.||..++-+.||.-|+++.+||.+---|..+
T Consensus 115 ~Gy~I~NvD~ti--iaq~PKi~p~~~~m~~nia~~L~i~~~~VnVKAtT~E~ 164 (187)
T 3b6n_A 115 RNYAIANVDIIV--IAEVPKISPIREEIVRNISSALGISESQVSLKGKTHEQ 164 (187)
T ss_dssp TTEEEEEEEEEE--ECSSSCSHHHHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEEEE--EeCCCcchHHHHHHHHHHHHHhCCCcceEEEEEecCCC
Confidence 357788775544 47789999999999999999999999999987666655
No 56
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=35.01 E-value=9.2 Score=38.54 Aligned_cols=19 Identities=16% Similarity=0.192 Sum_probs=0.0
Q ss_pred hhhhhh-hhhc--ccccccccc
Q 010546 476 LWSVWK-RRQE--ASKTYQPVG 494 (507)
Q Consensus 476 ~~~~~~-~~~~--~~~~~~~~~ 494 (507)
.+++|| ||.. ..+.|.|..
T Consensus 304 ~~~~~~~k~~~~~~~~~~~~~~ 325 (348)
T 1s7q_A 304 AFVMKMRRRNTGGKGGDYALAP 325 (348)
T ss_dssp ----------------------
T ss_pred EEEEEEEEecCCCCCCCcccCC
Confidence 356899 5433 225787754
No 57
>1scf_A Stem cell factor; steel factor, KIT ligand, MAST cell growth factor, hormone/growth factor complex; HET: 1PE; 2.20A {Homo sapiens} SCOP: a.26.1.2 PDB: 1exz_A 2e9w_C* 2o27_A 2o26_A
Probab=33.69 E-value=8.7 Score=36.69 Aligned_cols=26 Identities=31% Similarity=0.658 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHhHhhhhhhhhhc
Q 010546 458 AVVVGIVVTLLLGLSILGLWSVWKRRQE 485 (507)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (507)
+|++-.+..|++| .++|+.+ ||+||.
T Consensus 217 ~~~l~al~slvig-f~~ga~~-wk~k~~ 242 (273)
T 1scf_A 217 AMALPALFSLIIG-FAFGALY-WKKRQP 242 (273)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHH-HHHHHHh-hcccCC
Confidence 4555666777777 6777776 999874
No 58
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=31.46 E-value=29 Score=21.71 Aligned_cols=19 Identities=32% Similarity=0.747 Sum_probs=12.3
Q ss_pred hhhHHHHHHHHHHHHhHhhhh
Q 010546 459 VVVGIVVTLLLGLSILGLWSV 479 (507)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~ 479 (507)
|..| +..++..+++|.|+.
T Consensus 8 viag--lvalltflafgfwlf 26 (32)
T 2lx0_A 8 VIAG--LVALLTFLAFGFWLF 26 (32)
T ss_dssp HHHH--HHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHHHHH
Confidence 4444 344567788988875
No 59
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=30.75 E-value=24 Score=24.49 Aligned_cols=23 Identities=30% Similarity=0.774 Sum_probs=13.3
Q ss_pred eeehhhhHHHH-HHHHHHHHhHhh
Q 010546 455 NLVAVVVGIVV-TLLLGLSILGLW 477 (507)
Q Consensus 455 ~~~~~~~~~~~-~~~~~~~~~~~~ 477 (507)
+.+++++|++. ++++|+..+.+|
T Consensus 8 n~~~Iv~gvi~~ivliGl~lLliw 31 (43)
T 2k9j_B 8 DILVVLLSVMGAILLIGLAALLIW 31 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeehHHHHHHHHHHHHHHHHHHH
Confidence 45566666655 355666655444
No 60
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=28.71 E-value=32 Score=29.61 Aligned_cols=35 Identities=6% Similarity=0.217 Sum_probs=30.6
Q ss_pred CchHHHHHHHHHhhcccCcceEEEEeeeecCCceE
Q 010546 362 KPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDYL 396 (507)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (507)
+-.+.+|.+.||.+||++..|+|+--+..-.|.+.
T Consensus 65 ~~~~~~~~~~va~~lg~~~~~~RlW~~~~RqN~T~ 99 (130)
T 2kvr_A 65 NSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTK 99 (130)
T ss_dssp TSBHHHHHHHHHHHHCCCGGGCEEEECCCCBTTBC
T ss_pred cCcHHHHHHHHHHHhCCCcccEEEEEeecCCCCCC
Confidence 34689999999999999999999999888878754
No 61
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=28.65 E-value=13 Score=36.61 Aligned_cols=12 Identities=8% Similarity=0.080 Sum_probs=0.0
Q ss_pred HhHhhhhhhhhh
Q 010546 473 ILGLWSVWKRRQ 484 (507)
Q Consensus 473 ~~~~~~~~~~~~ 484 (507)
+++++++||||.
T Consensus 299 ~~~~~~~~~~~~ 310 (315)
T 1cd1_A 299 AVVYYIWRRRSA 310 (315)
T ss_dssp ------------
T ss_pred HHHHhheehhcC
Confidence 343455577653
No 62
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.65 E-value=32 Score=27.06 Aligned_cols=28 Identities=29% Similarity=0.285 Sum_probs=20.9
Q ss_pred eehhhhHHHHHHHHHHHHhHhhhhhhhh
Q 010546 456 LVAVVVGIVVTLLLGLSILGLWSVWKRR 483 (507)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (507)
++.|++|+++.-++.|++.-++..++.|
T Consensus 14 v~gvi~gilliGllllliwk~~~~i~Dr 41 (79)
T 2knc_B 14 LLSVMGAILLIGLAALLIWKLLITIHDR 41 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888888888888888777666444
No 63
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=25.70 E-value=21 Score=30.38 Aligned_cols=24 Identities=17% Similarity=0.772 Sum_probs=15.3
Q ss_pred ccccchheeeeehhhhHHHHHHHH
Q 010546 446 QIKQTWWQRNLVAVVVGIVVTLLL 469 (507)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~ 469 (507)
..++.||++.-+.+++++++.+++
T Consensus 87 l~rkmwwkn~K~~iii~~iv~iii 110 (119)
T 2kog_A 87 LKRKYWWKNLKMMIILGVICAIIL 110 (119)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345679999876666555554443
No 64
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=24.71 E-value=66 Score=25.82 Aligned_cols=16 Identities=25% Similarity=0.609 Sum_probs=14.4
Q ss_pred cEEEecCcceEEechH
Q 010546 165 GTVLDSGTTYAYLPGH 180 (507)
Q Consensus 165 ~aiIDSGTs~i~LP~~ 180 (507)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 6899999999999975
No 65
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=24.68 E-value=38 Score=28.31 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=26.1
Q ss_pred HHHHHHHHhhcccCcceEEEEeeeecCCceEEEEEee
Q 010546 366 TELSEFIAHELQVDDIEVHLLNFSSKGHDYLVRWGIF 402 (507)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (507)
.+|.+|+|+.|+|..|||.|. .|-.+..|-...
T Consensus 53 ~ali~~LAk~l~V~ks~V~Iv----~G~tSR~K~v~I 85 (108)
T 1n91_A 53 SHLVKFLGKQFRVAKSQVVIE----KGELGRHKQIKI 85 (108)
T ss_dssp HHHHHHHHHHTCCCTTTEEES----SCTTSSEEEEEE
T ss_pred HHHHHHHHHHhCCccceEEEE----ecCCCCccEEEE
Confidence 689999999999999999996 366565554444
No 66
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=24.41 E-value=1e+02 Score=31.03 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=40.5
Q ss_pred cceEEEEEEEEEEeeccCCCCCchHHHHHHHHHhhcccCcceEEEEeeeecC
Q 010546 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (507)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
.+.+|+-| ++.+=...+.|.||..+.-+.+|..|+++.+||.+---|+.|
T Consensus 296 ~g~~~~n~--d~~~~~~~pk~~~~~~~~~~~~~~~~~~~~~~v~~ka~t~e~ 345 (371)
T 1w55_A 296 IGFELINI--DICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEK 345 (371)
T ss_dssp TTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEE--eEEEEeCCCCchhHHHHHHHHHHHHhCCCcceEEEEEecCCC
Confidence 35666666 455566789999999999999999999999999986666554
No 67
>3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A*
Probab=20.51 E-value=1.5e+02 Score=28.52 Aligned_cols=66 Identities=8% Similarity=0.056 Sum_probs=35.0
Q ss_pred CchHHHHHHHHHhhcccC---cceEEEEeeeecCCceEEEEEeecCCCCcccch--hhHHHHHHHHhhcccccC
Q 010546 362 KPNFTELSEFIAHELQVD---DIEVHLLNFSSKGHDYLVRWGIFPDESDNYISN--TTALNIILRLREHHMQFP 430 (507)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 430 (507)
+-.+.|+++.+++..+.- ...|++.+|...+=...+++-. ...+|..- .--..|..++.||.+.+|
T Consensus 198 ~~~l~~i~~~~~~~~~~~~~~~~~v~~~~~~~s~i~~~v~~~~---~~~~~~~~~~~l~~~I~~~f~~~gI~ip 268 (285)
T 3udc_A 198 IEGLQEICEEVKKSRDDLIEGPTVLGITDMQDSKLVIMVYAKT---QPMQKWAVERDIRYRVKKMFDQKNISFP 268 (285)
T ss_dssp HHHHHHHHHHHHHHCSSBSSCCEEEEEEEEETTEEEEEEEEEE---STTCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhcccccccCcccccccccCCCEEEEEEEEEE---CcchHHHHHHHHHHHHHHHHHHCCCcCc
Confidence 334455555555554442 2334555554333333333333 33455432 334568889999999888
No 68
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=25.86 E-value=21 Score=24.26 Aligned_cols=13 Identities=23% Similarity=0.687 Sum_probs=6.9
Q ss_pred HHhHhhhhhhhhh
Q 010546 472 SILGLWSVWKRRQ 484 (507)
Q Consensus 472 ~~~~~~~~~~~~~ 484 (507)
+.+-+..+|+++-
T Consensus 24 sLIiLi~~w~qKP 36 (39)
T 2l6w_A 24 SLIILIMLWQKKP 36 (39)
Confidence 3333556677653
Done!