Query 010547
Match_columns 507
No_of_seqs 135 out of 1545
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 01:48:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02795 allantoinase 100.0 1E-61 2.2E-66 495.3 52.0 504 1-507 1-505 (505)
2 COG0044 PyrC Dihydroorotase an 100.0 8.3E-58 1.8E-62 450.8 46.1 426 44-497 2-427 (430)
3 PRK06189 allantoinase; Provisi 100.0 1.8E-57 3.8E-62 461.9 49.3 445 42-506 2-447 (451)
4 PRK07627 dihydroorotase; Provi 100.0 2E-56 4.3E-61 447.9 47.5 421 44-493 2-425 (425)
5 PRK13404 dihydropyrimidinase; 100.0 2.3E-56 5.1E-61 454.4 47.4 444 42-506 3-461 (477)
6 TIGR03178 allantoinase allanto 100.0 3.3E-56 7.2E-61 452.4 48.4 442 44-505 1-443 (443)
7 PRK08044 allantoinase; Provisi 100.0 9.9E-56 2.1E-60 447.0 48.9 441 43-505 3-449 (449)
8 cd01315 L-HYD_ALN L-Hydantoina 100.0 1.3E-55 2.8E-60 450.4 49.6 445 44-505 1-447 (447)
9 PRK09059 dihydroorotase; Valid 100.0 2E-55 4.2E-60 441.2 45.9 424 42-491 2-428 (429)
10 PLN02942 dihydropyrimidinase 100.0 3.6E-55 7.9E-60 447.7 46.7 444 41-505 3-457 (486)
11 PRK08323 phenylhydantoinase; V 100.0 1.4E-54 3E-59 444.6 46.8 441 44-506 2-452 (459)
12 TIGR02033 D-hydantoinase D-hyd 100.0 1.7E-54 3.6E-59 443.9 46.8 443 45-505 1-453 (454)
13 PRK07369 dihydroorotase; Provi 100.0 1.5E-54 3.3E-59 432.8 45.1 414 42-484 1-418 (418)
14 cd01314 D-HYD D-hydantoinases 100.0 3E-54 6.4E-59 440.3 46.1 435 45-497 1-442 (447)
15 PRK07575 dihydroorotase; Provi 100.0 1.5E-53 3.2E-58 430.7 47.2 433 42-505 2-435 (438)
16 PRK09236 dihydroorotase; Revie 100.0 1.9E-53 4E-58 431.6 47.4 439 43-505 2-441 (444)
17 PRK09060 dihydroorotase; Valid 100.0 2.5E-53 5.4E-58 429.4 46.3 433 42-506 4-438 (444)
18 PRK02382 dihydroorotase; Provi 100.0 9.7E-53 2.1E-57 426.2 44.8 433 42-506 1-435 (443)
19 KOG2584 Dihydroorotase and rel 100.0 1E-53 2.2E-58 396.3 29.6 447 40-504 11-468 (522)
20 PRK09357 pyrC dihydroorotase; 100.0 1.1E-51 2.3E-56 418.3 46.3 419 44-492 2-423 (423)
21 PRK08417 dihydroorotase; Provi 100.0 3.8E-52 8.2E-57 413.6 41.4 383 63-491 1-386 (386)
22 PRK01211 dihydroorotase; Provi 100.0 7.1E-52 1.5E-56 410.3 41.0 404 46-506 2-405 (409)
23 TIGR00857 pyrC_multi dihydroor 100.0 1.9E-51 4.1E-56 412.8 44.5 406 58-492 3-411 (411)
24 PRK04250 dihydroorotase; Provi 100.0 1.1E-49 2.5E-54 395.2 43.3 396 48-504 2-398 (398)
25 cd01318 DHOase_IIb Dihydroorot 100.0 1.6E-45 3.5E-50 361.6 37.1 361 93-486 1-361 (361)
26 PRK00369 pyrC dihydroorotase; 100.0 4.7E-45 1E-49 359.7 40.2 373 60-504 13-387 (392)
27 cd01317 DHOase_IIa Dihydroorot 100.0 3.3E-44 7.2E-49 356.5 38.9 371 86-482 2-374 (374)
28 cd01302 Cyclic_amidohydrolases 100.0 1.8E-43 3.9E-48 345.3 36.2 336 94-482 1-337 (337)
29 PRK09061 D-glutamate deacylase 100.0 9.2E-42 2E-46 348.9 36.8 393 42-507 18-507 (509)
30 cd01297 D-aminoacylase D-amino 100.0 1.5E-41 3.3E-46 341.8 36.0 359 44-502 1-415 (415)
31 cd01316 CAD_DHOase The eukaryo 100.0 6.4E-39 1.4E-43 311.1 38.3 338 94-497 2-339 (344)
32 PRK15446 phosphonate metabolis 100.0 2.1E-37 4.6E-42 306.6 29.6 360 43-492 2-382 (383)
33 TIGR02318 phosphono_phnM phosp 100.0 2.3E-36 5E-41 298.2 29.4 355 46-490 1-376 (376)
34 PRK06687 chlorohydrolase; Vali 100.0 2.4E-35 5.1E-40 298.2 29.5 373 45-499 2-418 (419)
35 PRK15493 5-methylthioadenosine 100.0 4.7E-35 1E-39 296.0 29.5 379 44-503 2-422 (435)
36 PRK13985 ureB urease subunit b 100.0 1.1E-33 2.3E-38 279.9 30.9 351 42-492 64-458 (568)
37 PRK07228 N-ethylammeline chlor 100.0 1E-34 2.2E-39 296.1 23.1 377 43-503 1-426 (445)
38 PRK12394 putative metallo-depe 100.0 1E-32 2.2E-37 274.7 35.2 345 42-492 2-376 (379)
39 PRK06380 metal-dependent hydro 100.0 2E-33 4.3E-38 284.4 30.5 372 44-504 2-413 (418)
40 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 1.2E-33 2.6E-38 286.6 27.7 368 45-496 1-411 (411)
41 PRK13308 ureC urease subunit a 100.0 1.8E-32 3.9E-37 272.4 33.8 349 41-492 66-459 (569)
42 PRK13206 ureC urease subunit a 100.0 1.5E-32 3.4E-37 274.2 33.0 355 42-495 70-467 (573)
43 PRK08203 hydroxydechloroatrazi 100.0 7.4E-33 1.6E-37 282.5 31.4 375 45-502 4-435 (451)
44 PRK08204 hypothetical protein; 100.0 8.8E-33 1.9E-37 282.4 31.6 368 42-503 1-429 (449)
45 PRK09045 N-ethylammeline chlor 100.0 1.5E-32 3.3E-37 279.4 33.0 375 43-504 7-428 (443)
46 PRK07203 putative chlorohydrol 100.0 1.8E-32 4E-37 278.7 32.5 373 45-503 2-427 (442)
47 cd00375 Urease_alpha Urease al 100.0 6.2E-32 1.3E-36 268.5 35.0 357 42-498 64-465 (567)
48 PRK06151 N-ethylammeline chlor 100.0 2.5E-33 5.4E-38 287.6 24.5 376 44-502 2-449 (488)
49 COG1228 HutI Imidazolonepropio 100.0 2.9E-33 6.2E-38 275.4 21.6 343 42-494 9-405 (406)
50 PRK13309 ureC urease subunit a 100.0 1.3E-31 2.7E-36 269.3 33.3 359 42-498 67-469 (572)
51 TIGR03314 Se_ssnA putative sel 100.0 4.1E-32 8.8E-37 275.1 29.0 379 45-503 1-426 (441)
52 TIGR01975 isoAsp_dipep isoaspa 100.0 5.3E-31 1.1E-35 259.4 35.9 360 45-496 2-383 (389)
53 PRK10657 isoaspartyl dipeptida 100.0 8E-31 1.7E-35 263.1 37.8 361 44-497 2-383 (388)
54 cd01294 DHOase Dihydroorotase 100.0 9.2E-32 2E-36 263.3 29.5 321 97-473 3-330 (335)
55 PRK12393 amidohydrolase; Provi 100.0 2.6E-31 5.6E-36 270.5 32.7 380 43-503 2-441 (457)
56 PRK13207 ureC urease subunit a 100.0 1.1E-30 2.4E-35 261.8 36.4 358 42-499 66-466 (568)
57 PRK08393 N-ethylammeline chlor 100.0 1.7E-31 3.7E-36 269.9 29.4 366 44-502 2-411 (424)
58 PRK06038 N-ethylammeline chlor 100.0 2.9E-31 6.3E-36 268.5 28.6 367 43-502 2-412 (430)
59 PRK09228 guanine deaminase; Pr 100.0 1.1E-30 2.3E-35 263.9 32.4 356 59-492 30-432 (433)
60 TIGR01178 ade adenine deaminas 100.0 4.7E-30 1E-34 262.8 35.5 323 44-496 1-342 (552)
61 cd01308 Isoaspartyl-dipeptidas 100.0 7.7E-30 1.7E-34 255.8 35.4 357 45-497 2-382 (387)
62 PRK09356 imidazolonepropionase 100.0 2.7E-30 5.9E-35 260.9 31.6 343 42-491 2-406 (406)
63 TIGR01792 urease_alph urease, 100.0 2.7E-30 5.9E-35 259.4 30.0 357 42-498 65-464 (567)
64 PRK07213 chlorohydrolase; Prov 100.0 8.2E-30 1.8E-34 253.3 33.0 337 45-488 2-375 (375)
65 COG1574 Predicted metal-depend 100.0 1.1E-30 2.4E-35 262.5 26.9 367 41-492 3-534 (535)
66 PRK05985 cytosine deaminase; P 100.0 1.5E-29 3.2E-34 253.6 34.7 353 43-493 2-391 (391)
67 PRK09237 dihydroorotase; Provi 100.0 1.7E-29 3.6E-34 252.3 33.9 348 45-496 1-374 (380)
68 cd01293 Bact_CD Bacterial cyto 100.0 7.6E-30 1.6E-34 257.8 31.4 354 47-489 2-398 (398)
69 PLN02303 urease 100.0 2.7E-30 5.9E-35 264.9 27.4 354 42-495 333-731 (837)
70 TIGR02967 guan_deamin guanine 100.0 9.6E-30 2.1E-34 256.2 28.4 352 59-486 5-401 (401)
71 TIGR00856 pyrC_dimer dihydroor 100.0 1.2E-28 2.6E-33 239.3 31.6 329 95-479 2-340 (341)
72 cd01303 GDEase Guanine deamina 100.0 9.2E-29 2E-33 250.0 32.0 351 58-486 24-429 (429)
73 COG1820 NagA N-acetylglucosami 100.0 5.3E-29 1.2E-33 235.0 27.9 343 45-491 2-380 (380)
74 PRK09230 cytosine deaminase; P 100.0 3.6E-28 7.8E-33 244.5 35.7 366 42-492 3-407 (426)
75 PRK08418 chlorohydrolase; Prov 100.0 2.3E-29 5E-34 252.0 25.8 366 45-489 2-407 (408)
76 PRK07583 cytosine deaminase-li 100.0 4.7E-28 1E-32 245.5 34.7 370 38-493 6-425 (438)
77 COG1001 AdeC Adenine deaminase 100.0 2.6E-28 5.7E-33 239.7 29.6 328 40-494 21-362 (584)
78 PRK07572 cytosine deaminase; V 100.0 1.2E-27 2.6E-32 241.8 34.9 364 43-494 2-405 (426)
79 COG0402 SsnA Cytosine deaminas 100.0 2.8E-28 6.1E-33 246.1 27.5 370 43-496 2-414 (421)
80 TIGR02022 hutF formiminoglutam 100.0 4.4E-28 9.6E-33 246.4 29.0 361 45-498 4-439 (455)
81 PRK14085 imidazolonepropionase 100.0 7.6E-28 1.6E-32 240.2 29.3 313 43-452 1-366 (382)
82 PRK09229 N-formimino-L-glutama 100.0 2.3E-28 5E-33 249.3 25.8 362 44-497 4-438 (456)
83 TIGR00221 nagA N-acetylglucosa 100.0 1.5E-27 3.1E-32 234.3 30.2 343 43-487 3-380 (380)
84 TIGR01224 hutI imidazoloneprop 100.0 3.8E-28 8.2E-33 243.0 26.2 322 59-488 2-377 (377)
85 PRK10027 cryptic adenine deami 100.0 9.9E-27 2.2E-31 238.2 36.6 329 40-496 27-370 (588)
86 cd01313 Met_dep_hydrolase_E Me 100.0 4.8E-28 1E-32 244.0 26.3 343 53-487 2-418 (418)
87 PRK11170 nagA N-acetylglucosam 100.0 7.3E-27 1.6E-31 230.1 31.6 344 45-491 2-381 (382)
88 TIGR03121 one_C_dehyd_A formyl 100.0 4.7E-27 1E-31 234.7 30.4 392 45-505 2-513 (556)
89 PRK05451 dihydroorotase; Provi 100.0 1.4E-26 3.1E-31 226.1 31.1 327 95-480 5-344 (345)
90 cd01296 Imidazolone-5PH Imidaz 100.0 3.2E-27 6.9E-32 235.9 26.2 318 63-486 1-371 (371)
91 cd01312 Met_dep_hydrolase_D Me 100.0 3.5E-27 7.5E-32 233.9 26.0 346 68-487 1-381 (381)
92 cd01304 FMDH_A Formylmethanofu 100.0 7.1E-26 1.5E-30 225.2 34.8 397 47-505 1-511 (541)
93 COG3653 N-acyl-D-aspartate/D-g 100.0 8.9E-26 1.9E-30 210.4 32.4 418 40-506 3-568 (579)
94 COG3454 Metal-dependent hydrol 100.0 6.5E-27 1.4E-31 211.1 22.5 357 45-490 1-377 (377)
95 KOG3968 Atrazine chlorohydrola 100.0 1.3E-27 2.9E-32 223.8 18.3 358 60-491 27-438 (439)
96 PRK06846 putative deaminase; V 100.0 2.6E-25 5.7E-30 223.9 32.9 352 44-492 5-406 (410)
97 cd01299 Met_dep_hydrolase_A Me 100.0 7.3E-27 1.6E-31 230.7 20.7 289 86-452 1-337 (342)
98 cd00854 NagA N-acetylglucosami 99.9 2.6E-26 5.6E-31 227.8 24.5 175 45-233 1-195 (374)
99 TIGR03583 EF_0837 probable ami 99.9 6.4E-25 1.4E-29 218.1 33.1 337 44-489 2-364 (365)
100 cd01307 Met_dep_hydrolase_B Me 99.9 4.3E-25 9.3E-30 216.8 30.4 296 62-450 1-317 (338)
101 PLN02599 dihydroorotase 99.9 5.6E-25 1.2E-29 213.7 29.2 296 95-434 23-328 (364)
102 cd01309 Met_dep_hydrolase_C Me 99.9 3.2E-25 6.9E-30 218.7 27.1 311 67-490 1-359 (359)
103 COG0804 UreC Urea amidohydrola 99.9 5.9E-25 1.3E-29 203.2 24.9 347 40-491 64-457 (568)
104 COG3964 Predicted amidohydrola 99.9 3E-24 6.5E-29 191.8 25.4 315 41-450 2-340 (386)
105 cd01300 YtcJ_like YtcJ_like me 99.9 4.3E-24 9.3E-29 220.1 24.1 191 204-445 288-479 (479)
106 cd01295 AdeC Adenine deaminase 99.9 1.3E-22 2.7E-27 204.7 31.3 282 90-493 1-293 (422)
107 cd01306 PhnM PhnM is believed 99.9 1.8E-19 3.8E-24 172.4 25.6 264 97-449 1-312 (325)
108 COG1229 FwdA Formylmethanofura 99.8 1.3E-17 2.9E-22 155.0 25.6 82 410-502 438-521 (575)
109 PF13147 Amidohydro_4: Amidohy 99.8 9.7E-19 2.1E-23 169.4 19.1 293 90-444 1-304 (304)
110 KOG3892 N-acetyl-glucosamine-6 99.8 6.6E-18 1.4E-22 148.9 16.3 96 41-137 10-111 (407)
111 PF01979 Amidohydro_1: Amidohy 99.7 3E-18 6.4E-23 168.9 8.9 293 95-447 1-333 (333)
112 PF07969 Amidohydro_3: Amidohy 99.7 5.1E-15 1.1E-19 149.8 18.8 246 123-445 137-404 (404)
113 PF13594 Amidohydro_5: Amidohy 99.6 3.6E-15 7.8E-20 109.2 7.9 68 63-133 1-68 (68)
114 cd01292 metallo-dependent_hydr 99.5 4E-13 8.7E-18 128.1 17.7 246 100-426 1-275 (275)
115 cd01305 archeal_chlorohydrolas 99.5 6.8E-13 1.5E-17 125.7 15.4 133 213-426 127-263 (263)
116 PRK06886 hypothetical protein; 99.5 1.5E-11 3.3E-16 118.4 24.8 244 121-429 74-327 (329)
117 COG0418 PyrC Dihydroorotase [N 99.4 5.7E-10 1.2E-14 101.1 27.6 293 95-430 5-304 (344)
118 KOG2902 Dihydroorotase [Nucleo 99.0 4.3E-08 9.3E-13 85.9 19.1 290 96-429 6-300 (344)
119 cd01310 TatD_DNAse TatD like p 98.9 5.6E-07 1.2E-11 84.7 21.5 241 100-428 1-251 (251)
120 TIGR00010 hydrolase, TatD fami 98.8 4E-07 8.8E-12 85.7 20.0 238 100-429 1-252 (252)
121 PRK10812 putative DNAse; Provi 98.7 9.4E-06 2E-10 76.4 22.5 246 100-429 3-256 (265)
122 COG0084 TatD Mg-dependent DNas 98.6 2.1E-05 4.5E-10 72.8 21.8 241 100-429 3-256 (256)
123 PRK11449 putative deoxyribonuc 98.5 3.2E-05 7E-10 72.5 22.3 248 97-429 2-258 (258)
124 cd00530 PTE Phosphotriesterase 98.4 4.5E-05 9.7E-10 73.6 21.5 158 209-427 134-293 (293)
125 PF01026 TatD_DNase: TatD rela 98.3 2.3E-05 4.9E-10 73.8 15.1 245 101-428 1-255 (255)
126 PRK10425 DNase TatD; Provision 98.3 0.00034 7.4E-09 65.6 22.0 252 100-429 1-258 (258)
127 TIGR01430 aden_deam adenosine 98.2 8.1E-05 1.8E-09 72.8 17.9 144 207-429 168-312 (324)
128 PF12890 DHOase: Dihydro-orota 98.2 3E-06 6.6E-11 67.7 6.0 140 93-298 1-140 (142)
129 cd01320 ADA Adenosine deaminas 98.2 0.00015 3.4E-09 70.9 18.3 143 208-429 170-313 (325)
130 PRK09875 putative hydrolase; P 98.1 0.0011 2.4E-08 63.0 22.4 154 209-428 137-292 (292)
131 PRK09358 adenosine deaminase; 98.1 0.00038 8.3E-09 68.6 19.8 143 208-429 179-322 (340)
132 COG1099 Predicted metal-depend 97.9 0.0062 1.3E-07 53.7 20.3 238 100-429 2-253 (254)
133 PF02126 PTE: Phosphotriestera 97.6 0.00084 1.8E-08 64.3 11.9 160 211-427 142-307 (308)
134 PF07908 D-aminoacyl_C: D-amin 97.6 7.7E-05 1.7E-09 49.6 3.2 29 478-506 19-47 (48)
135 cd01311 PDC_hydrolase 2-pyrone 97.6 0.079 1.7E-06 50.1 25.9 121 99-232 1-131 (263)
136 PF00449 Urease_alpha: Urease 97.2 0.00065 1.4E-08 52.8 4.9 39 42-80 65-103 (121)
137 PF04909 Amidohydro_2: Amidohy 97.2 0.012 2.7E-07 55.7 14.9 187 175-429 83-273 (273)
138 COG1831 Predicted metal-depend 96.9 0.14 3E-06 46.8 17.6 139 209-429 143-282 (285)
139 cd00443 ADA_AMPD Adenosine/AMP 96.5 0.2 4.3E-06 48.4 17.2 140 209-428 151-292 (305)
140 COG1735 Php Predicted metal-de 96.4 0.69 1.5E-05 43.4 19.1 162 210-429 151-314 (316)
141 PTZ00124 adenosine deaminase; 96.3 0.44 9.5E-06 47.0 18.1 140 211-426 206-346 (362)
142 cd01321 ADGF Adenosine deamina 96.2 0.22 4.7E-06 48.9 15.8 147 209-429 177-329 (345)
143 PRK08392 hypothetical protein; 95.2 2.3 5E-05 38.7 20.1 32 101-134 1-32 (215)
144 COG1816 Add Adenosine deaminas 94.9 0.31 6.8E-06 47.3 11.1 143 208-429 182-325 (345)
145 PRK00912 ribonuclease P protei 94.7 3.6 7.8E-05 38.1 17.4 63 356-438 163-227 (237)
146 PF00962 A_deaminase: Adenosin 94.1 0.77 1.7E-05 45.0 12.4 156 189-429 164-320 (331)
147 COG2159 Predicted metal-depend 93.4 7.7 0.00017 37.2 20.8 173 177-429 113-290 (293)
148 TIGR01431 adm_rel adenosine de 92.8 7.6 0.00016 40.0 17.1 55 301-372 361-415 (479)
149 PRK08609 hypothetical protein; 92.8 9.9 0.00022 40.2 18.4 35 101-137 336-370 (570)
150 COG3618 Predicted metal-depend 92.5 9.3 0.0002 35.8 22.4 152 97-297 6-171 (279)
151 COG4464 CapC Capsular polysacc 87.3 1.3 2.9E-05 39.2 5.3 38 100-137 1-41 (254)
152 PRK07945 hypothetical protein; 86.1 36 0.00078 33.3 18.1 35 100-136 97-131 (335)
153 KOG1097 Adenine deaminase/aden 85.6 21 0.00046 35.3 13.0 108 209-372 225-332 (399)
154 PRK06361 hypothetical protein; 84.9 6.8 0.00015 35.5 9.2 96 290-429 115-210 (212)
155 KOG3020 TatD-related DNase [Re 71.7 95 0.0021 29.6 18.4 130 94-233 12-157 (296)
156 PRK09248 putative hydrolase; V 70.4 91 0.002 28.9 19.0 36 100-136 4-39 (246)
157 PRK12330 oxaloacetate decarbox 68.7 71 0.0015 33.1 11.7 108 118-236 99-212 (499)
158 PRK14042 pyruvate carboxylase 58.6 1.5E+02 0.0033 31.5 12.2 106 118-236 98-209 (596)
159 cd00951 KDGDH 5-dehydro-4-deox 56.9 1.3E+02 0.0028 28.8 10.7 109 114-231 19-132 (289)
160 KOG4549 Magnesium-dependent ph 52.5 87 0.0019 25.6 7.0 67 85-158 6-83 (144)
161 PRK12581 oxaloacetate decarbox 52.1 2.9E+02 0.0062 28.5 14.1 106 118-236 107-218 (468)
162 COG5016 Pyruvate/oxaloacetate 51.6 2.6E+02 0.0056 28.0 11.4 106 118-236 100-211 (472)
163 PRK03620 5-dehydro-4-deoxygluc 51.0 2E+02 0.0042 27.7 10.9 109 114-231 26-139 (303)
164 COG1242 Predicted Fe-S oxidore 49.7 2.3E+02 0.005 26.8 11.1 60 209-298 166-225 (312)
165 PF10055 DUF2292: Uncharacteri 49.5 21 0.00045 22.3 2.5 18 60-77 17-34 (38)
166 PF02811 PHP: PHP domain; Int 48.6 23 0.0005 30.5 3.9 35 101-135 1-35 (175)
167 PLN02417 dihydrodipicolinate s 47.3 2.2E+02 0.0049 26.9 10.6 108 114-231 20-132 (280)
168 TIGR03249 KdgD 5-dehydro-4-deo 46.3 2.3E+02 0.005 27.1 10.6 110 113-231 23-137 (296)
169 TIGR01429 AMP_deaminase AMP de 45.3 2.2E+02 0.0048 30.3 10.7 61 350-429 503-564 (611)
170 cd00953 KDG_aldolase KDG (2-ke 44.6 2.8E+02 0.0061 26.2 11.8 111 113-231 17-128 (279)
171 smart00518 AP2Ec AP endonuclea 43.6 2.8E+02 0.006 25.9 11.7 52 180-231 14-65 (273)
172 PRK15108 biotin synthase; Prov 42.4 3.3E+02 0.0072 26.8 11.2 112 114-231 77-191 (345)
173 cd01319 AMPD AMP deaminase (AM 41.8 1.6E+02 0.0034 30.6 9.0 60 351-429 392-452 (496)
174 PRK12331 oxaloacetate decarbox 41.1 3.7E+02 0.0081 27.5 11.5 108 118-236 98-209 (448)
175 TIGR01108 oadA oxaloacetate de 40.2 4.8E+02 0.01 27.9 12.5 108 118-236 93-204 (582)
176 PRK01060 endonuclease IV; Prov 38.4 3.4E+02 0.0074 25.4 11.9 54 178-231 14-70 (281)
177 PF05984 Cytomega_UL20A: Cytom 37.7 76 0.0016 23.4 4.2 19 6-24 1-19 (100)
178 cd00952 CHBPH_aldolase Trans-o 36.9 3.1E+02 0.0066 26.5 9.9 110 114-231 27-142 (309)
179 cd00950 DHDPS Dihydrodipicolin 36.8 2.8E+02 0.0061 26.2 9.6 113 114-231 19-133 (284)
180 TIGR01496 DHPS dihydropteroate 36.6 2.5E+02 0.0054 26.3 8.9 65 178-243 25-94 (257)
181 PRK08195 4-hyroxy-2-oxovalerat 36.3 4.2E+02 0.0092 25.9 11.1 103 121-234 93-199 (337)
182 PRK14040 oxaloacetate decarbox 35.4 5.9E+02 0.013 27.3 13.0 108 118-236 99-210 (593)
183 PF00701 DHDPS: Dihydrodipicol 35.3 2.5E+02 0.0055 26.6 9.0 110 115-232 21-135 (289)
184 cd07944 DRE_TIM_HOA_like 4-hyd 34.8 3.9E+02 0.0085 25.1 12.5 104 121-235 87-194 (266)
185 PRK09282 pyruvate carboxylase 34.4 6.1E+02 0.013 27.2 12.3 108 118-236 98-209 (592)
186 PRK06740 histidinol-phosphatas 32.8 4.8E+02 0.01 25.5 17.4 18 353-370 277-294 (331)
187 COG1387 HIS2 Histidinol phosph 32.3 4.1E+02 0.0088 24.5 15.4 34 100-135 2-35 (237)
188 PF10566 Glyco_hydro_97: Glyco 32.2 1.7E+02 0.0037 27.6 6.9 109 117-232 33-158 (273)
189 PRK14041 oxaloacetate decarbox 32.0 5.9E+02 0.013 26.3 12.2 108 118-236 97-208 (467)
190 cd00408 DHDPS-like Dihydrodipi 31.9 4.4E+02 0.0095 24.8 11.2 110 113-231 15-130 (281)
191 PRK03170 dihydrodipicolinate s 31.8 4.5E+02 0.0099 24.9 10.4 109 114-231 20-134 (292)
192 COG4939 Major membrane immunog 31.7 1.6E+02 0.0034 23.9 5.5 20 57-76 45-65 (147)
193 PRK04147 N-acetylneuraminate l 31.4 4.7E+02 0.01 24.9 11.0 109 114-231 22-137 (293)
194 cd07943 DRE_TIM_HOA 4-hydroxy- 30.8 4.5E+02 0.0097 24.6 10.8 105 120-235 89-196 (263)
195 PF04273 DUF442: Putative phos 30.2 2.8E+02 0.0061 22.0 9.0 28 207-234 69-96 (110)
196 PLN03055 AMP deaminase; Provis 27.8 2.3E+02 0.0049 30.2 7.5 61 350-429 481-542 (602)
197 PRK06256 biotin synthase; Vali 27.8 4.6E+02 0.0099 25.5 9.6 112 114-231 92-207 (336)
198 smart00481 POLIIIAc DNA polyme 27.4 78 0.0017 22.2 3.1 33 102-134 1-33 (67)
199 COG2131 ComEB Deoxycytidylate 27.3 83 0.0018 27.0 3.6 23 59-81 29-51 (164)
200 PF09890 DUF2117: Uncharacteri 26.6 87 0.0019 28.2 3.7 61 45-105 104-164 (215)
201 TIGR01235 pyruv_carbox pyruvat 26.0 8.3E+02 0.018 28.6 12.2 107 119-236 628-744 (1143)
202 cd00952 CHBPH_aldolase Trans-o 25.6 4.1E+02 0.009 25.6 8.7 50 180-232 33-85 (309)
203 PRK00366 ispG 4-hydroxy-3-meth 25.6 6.6E+02 0.014 24.8 16.7 99 120-239 46-145 (360)
204 PRK08444 hypothetical protein; 25.6 3.8E+02 0.0083 26.5 8.5 113 114-228 81-206 (353)
205 PF05862 IceA2: Helicobacter p 24.6 1.7E+02 0.0038 19.9 3.9 9 65-73 7-15 (59)
206 PRK09240 thiH thiamine biosynt 24.4 4.2E+02 0.0092 26.3 8.7 107 113-226 104-217 (371)
207 PRK03906 mannonate dehydratase 24.1 3E+02 0.0066 27.5 7.5 25 211-235 214-238 (385)
208 TIGR03217 4OH_2_O_val_ald 4-hy 24.1 6.8E+02 0.015 24.4 11.2 102 121-234 92-198 (333)
209 TIGR03221 muco_delta muconolac 24.0 44 0.00095 25.5 1.2 47 409-455 13-64 (90)
210 cd00959 DeoC 2-deoxyribose-5-p 23.5 3.7E+02 0.0079 24.0 7.4 105 112-229 13-121 (203)
211 PRK07226 fructose-bisphosphate 23.0 4E+02 0.0086 25.0 7.8 108 112-231 35-146 (267)
212 TIGR00683 nanA N-acetylneurami 22.8 6.7E+02 0.014 23.9 10.7 107 116-231 21-135 (290)
213 COG0821 gcpE 1-hydroxy-2-methy 22.5 7.3E+02 0.016 24.2 16.5 99 120-239 40-138 (361)
214 COG1312 UxuA D-mannonate dehyd 22.3 2.2E+02 0.0047 27.6 5.7 131 213-375 194-328 (362)
215 PLN02768 AMP deaminase 22.2 3.1E+02 0.0067 30.2 7.4 61 350-429 714-775 (835)
216 TIGR00612 ispG_gcpE 1-hydroxy- 22.1 7.5E+02 0.016 24.2 16.8 98 120-238 38-135 (346)
217 PF00834 Ribul_P_3_epim: Ribul 21.9 5.8E+02 0.013 22.8 9.5 99 178-322 14-115 (201)
218 TIGR02351 thiH thiazole biosyn 21.8 4.4E+02 0.0095 26.2 8.2 108 114-229 104-220 (366)
219 KOG3892 N-acetyl-glucosamine-6 21.6 70 0.0015 29.8 2.2 67 398-491 336-404 (407)
220 PF03786 UxuA: D-mannonate deh 21.1 1.1E+02 0.0024 30.0 3.6 131 213-375 188-322 (351)
221 TIGR00674 dapA dihydrodipicoli 21.0 7.1E+02 0.015 23.5 10.9 109 114-231 17-131 (285)
222 cd00954 NAL N-Acetylneuraminic 20.7 7.3E+02 0.016 23.5 11.3 109 114-231 19-135 (288)
223 COG0075 Serine-pyruvate aminot 20.4 6.7E+02 0.015 25.1 8.9 30 207-236 116-145 (383)
224 PF08139 LPAM_1: Prokaryotic m 20.1 1.1E+02 0.0023 17.2 1.9 13 7-19 5-17 (25)
No 1
>PLN02795 allantoinase
Probab=100.00 E-value=1e-61 Score=495.35 Aligned_cols=504 Identities=70% Similarity=1.136 Sum_probs=417.8
Q ss_pred CCcccchhhhhhHHHHHHHHHHh-hheecCccccccccCCCCcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCC
Q 010547 1 MENLNLQWRLLPTLTLLAASLFL-LVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDW 79 (507)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~ 79 (507)
||.--||.+-++|...+...++. +|....-.+........++.+++|+|++|+++++...++|+|+||+|++|++....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~vv~~~~~~~~~v~i~dG~I~~I~~~~~~ 80 (505)
T PLN02795 1 MESALLQLRILPLLALLATLVFFFLFAPALPLQGRDRCSLLPWPHFVLYSKRVVTPAGVIPGAVEVEGGRIVSVTKEEEA 80 (505)
T ss_pred CchHhhhhhhHHHHHHHHHHHHHHHhccccccccccccccccccceEEECCEEEECCCeEEEEEEEECCEEEEecCcccc
Confidence 67777899999998888755554 44433333344445556678999999999998887789999999999999975432
Q ss_pred CCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc
Q 010547 80 PRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK 159 (507)
Q Consensus 80 ~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~ 159 (507)
+...++.++||++|++|+|||||+|+|+..++...++++....+.++.+||||+++++.++.|.....+.+....+....
T Consensus 81 ~~~~~~~~~ida~G~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~ 160 (505)
T PLN02795 81 PKSQKKPHVLDYGNAVVMPGLIDVHVHLNEPGRTEWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKG 160 (505)
T ss_pred ccccCCCEEEECCCCEEecCEEecccCcCCCCccchhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhcc
Confidence 21112568999999999999999999998876667888999999999999999999984456777778888887777777
Q ss_pred CceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchh
Q 010547 160 RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (507)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 239 (507)
...+++.++.+.........+++.++.+.|+.+++.|+.+.+.+..+..+++.+.++++.+++++.++.+|+|+...+..
T Consensus 161 ~~~vd~~~~~~~~~~~~~~~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~ 240 (505)
T PLN02795 161 KLYVDVGFWGGLVPENAHNASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVES 240 (505)
T ss_pred CceeeeeceecccCcchhHHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhh
Confidence 77788776665543333445677777788999999987664444456778899999999999999999999999876431
Q ss_pred hhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEec
Q 010547 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319 (507)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~ 319 (507)
.. . ...+......++..+|...|..++.+.+.++++++..+..++.++|+.|+++...+++.++.+++.|+.+++++
T Consensus 241 ~~--~-~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev 317 (505)
T PLN02795 241 DS--R-LDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVET 317 (505)
T ss_pred hh--h-hhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEe
Confidence 11 0 02223344455778999999999999999999875555556889999999986589999999999999999999
Q ss_pred ccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHH
Q 010547 320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLP 399 (507)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 399 (507)
||||+.++.+.+...++.++++||+|...+++.+++++.+|.+++++|||+|+...+|.....+|+.++.|+.+++..++
T Consensus 318 ~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~ 397 (505)
T PLN02795 318 CPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLP 397 (505)
T ss_pred ChhhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHH
Confidence 99999999999877889999999999999999999999999999999999999988887666679999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEE
Q 010547 400 VTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKV 479 (507)
Q Consensus 400 ~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 479 (507)
.++....+.+++++++++++|.|||++||++++|+|++|++|||+|+|++..|.++....+.++..+++||.|..+.|.|
T Consensus 398 ~~~~~~~~~~l~l~~~v~~~s~~pA~~~gl~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g~v 477 (505)
T PLN02795 398 ATWTAGRAYGLTLEQLARWWSERPAKLAGLDSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSGKV 477 (505)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEeEE
Confidence 99988888899999999999999999999966899999999999999999988887552234444238999999999999
Q ss_pred EEEEECCEEEEecCcccCCCCCcccccC
Q 010547 480 LATISRGNLVYKEGNHAPAACGSPILAT 507 (507)
Q Consensus 480 ~~v~v~G~~v~~~g~~~~~~~~~~~~~~ 507 (507)
..|+++|++||++|+++....|+++.++
T Consensus 478 ~~tiv~G~~v~~~g~~~~~~~G~~~~~~ 505 (505)
T PLN02795 478 IATFVRGNLVFLEGKHAKQACGSPILAK 505 (505)
T ss_pred EEEEECCEEEEECCeEcCCCCCeEecCC
Confidence 9999999999999999877789999875
No 2
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=8.3e-58 Score=450.77 Aligned_cols=426 Identities=36% Similarity=0.539 Sum_probs=384.4
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK 123 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~ 123 (507)
+++|+|+++++++....++|.|+||+|++|++..... .+.++||++|++|+||+||.|+|+..++...++++.+..+
T Consensus 2 ~~lIk~~~iv~~~~~~~~di~i~~g~I~~Ig~~l~~~---~~~~iiD~~g~~v~PG~ID~HVH~repg~~~ke~~~tgs~ 78 (430)
T COG0044 2 DLLIKNARVVDPGEDEVADILIKDGKIAAIGKNLEPT---SGAEIIDAKGLLVLPGLVDLHVHFREPGFEHKETFETGSR 78 (430)
T ss_pred cEEEeccEEEcCCCceEecEEEECCEEEEeccCCCCC---CCCcEEECCCCEEccCeeEEEEecCCCCcchhhhHHHHHH
Confidence 6799999999997678999999999999999875544 2789999999999999999999999999999999999999
Q ss_pred HHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCC
Q 010547 124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 203 (507)
Q Consensus 124 ~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (507)
.++++||||++++| ++.|...+.+.+......+..+..+++.+++++........++..... ..+++.|+..++
T Consensus 79 AAa~GG~Ttv~dmP-nt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~~~~~~~~~~~~~---~~g~~~F~~~~~-- 152 (430)
T COG0044 79 AAAAGGVTTVVDMP-NTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKGNLGKLELTERGV---EAGFKGFMDDST-- 152 (430)
T ss_pred HHHcCCceEEEECC-CCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEeccccchhhhhhhhh---ccceEEEecCCc--
Confidence 99999999999999 899999999999999999999999999999988887665333333322 356666664432
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCC
Q 010547 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283 (507)
Q Consensus 204 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 283 (507)
+....+.+++..+.++..+..+.+|+|+...+..+.+ .++..+...++..+|...|..++.+.+.++..+
T Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~----~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~---- 222 (430)
T COG0044 153 --GALDDDVLEEALEYAAELGALILVHAEDDDLIAEGVM----NEGLRAPELGLAGRPPIAEASAIARDLELARAT---- 222 (430)
T ss_pred --CcCCHHHHHHHHHHHHhcCCeEEEecCChhHhhhHHH----hcCccchhhccCCCChHHHHHHHHHHHHHHHHh----
Confidence 5688999999999999999999999999876654444 555666777888999999999999999999976
Q ss_pred CCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCee
Q 010547 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (507)
Q Consensus 284 ~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 363 (507)
|.++|+.|+++. +++++++.++..|++++++++|||+.++.+++..+++.++.+||+|...++..+++++.+|.++
T Consensus 223 ---g~~vhi~HiSt~-~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID 298 (430)
T COG0044 223 ---GARVHICHISTK-ESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIEDLGTLAKVNPPLRDEEDREALWEALKDGVID 298 (430)
T ss_pred ---CCcEEEEEcCCH-HHHHHHHHHhhcCCceEEeecchheEccHhHhhccCcceEECCCCCCHHHHHHHHHHHhCCCCc
Confidence 899999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcE
Q 010547 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADL 443 (507)
Q Consensus 364 ~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADl 443 (507)
.++|||+|+...+|.. +|+.++.|+.|++..++.++..+.+..+|+.+++++.|.|||++||++..|.|++|+.|||
T Consensus 299 ~iasDHaPht~eeK~~---~f~~ap~G~~glE~~lpl~l~lv~~g~lsl~~~v~~~S~nPA~ifgl~~~g~i~~G~~ADl 375 (430)
T COG0044 299 VIASDHAPHTLEEKRL---PFEEAPSGIPGLETALPLLLTLVKKGRLSLERLVELLSTNPARIFGLPPKGAIEEGADADL 375 (430)
T ss_pred EEEcCCCCCCHHHhcc---chhhCCCCCccHHHHHHHHHHHHHcCCcCHHHHHHHHhhCHHHHhCCCCCCcccCCCccCE
Confidence 9999999999998753 3999999999999999999997777889999999999999999999955788999999999
Q ss_pred EEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC
Q 010547 444 VVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 444 vvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
+|+|++..|.+... .+.++.. ++||.|....|.|..|+++|+++|.+++...
T Consensus 376 ~lvD~~~~~~i~~~-~~~sk~~-~sPf~G~~~~g~v~~Ti~rG~~v~~~~~~~~ 427 (430)
T COG0044 376 VLVDPDEEWTIRAE-ELYSKAK-NSPFEGFELKGRVVATILRGKVVYEDGEVIA 427 (430)
T ss_pred EEEcCCCCeEEchh-hhccccC-CCCcCCCEEeeeEEEEEECCEEEEECCcEec
Confidence 99999999999888 8999999 9999999999999999999999999997653
No 3
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=1.8e-57 Score=461.88 Aligned_cols=445 Identities=39% Similarity=0.677 Sum_probs=381.9
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
+.+++|+|++|+++++...++|+|+||+|++|++....+ +.++||++|++|+|||||+|+|+..++...++++.+.
T Consensus 2 ~~~~~i~~~~v~~~~~~~~~~v~i~~G~I~~i~~~~~~~----~~~~iD~~g~~vlPG~ID~H~H~~~~~~~~~~~~~~~ 77 (451)
T PRK06189 2 MYDLIIRGGKVVTPEGVYRADIGIKNGKIAEIAPEISSP----AREIIDADGLYVFPGMIDVHVHFNEPGRTHWEGFATG 77 (451)
T ss_pred CccEEEECCEEEcCCCcEEEEEEEECCEEEEecCCCCCC----CCeEEECCCCEEecCEEEeeeccCCCCCCCcccHHHH
Confidence 467899999999988888899999999999998764322 5689999999999999999999988766678889999
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (507)
.+.++++||||+++++.++.|.....+.+....+.++....+++.++.+.... ..+++.++.+.|+.+++.|+.+.+
T Consensus 78 ~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~l~~l~~~Gv~~~k~f~~~~~ 154 (451)
T PRK06189 78 SAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVPG---NLEHLRELAEAGVIGFKAFMSNSG 154 (451)
T ss_pred HHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEeccccc---CHHHHHHHHHcCCcEEEEEccccC
Confidence 99999999999999985566777778888888887887888898887544322 366788888899999999976544
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
..+.+..+...+.++++.+++.+..+..|+|+...+....... ...+..+...++..+|...|..++.+.+.++++.
T Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~-~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~-- 231 (451)
T PRK06189 155 TDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQA-RQQGKTDVRDYLESRPVVAELEAVQRALLYAQET-- 231 (451)
T ss_pred CCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHH-HhcCCCChhHccccCCHHHHHHHHHHHHHHHHHh--
Confidence 3345567788999999999999999999999887644332111 1233334455778899999999999999999976
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 361 (507)
|.++|+.|+++. .+++.++.++..|+.+++++|||++.++.+.+...+..++.+||+|...+++.+++++.+|.
T Consensus 232 -----g~~~hi~HiSt~-~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~ 305 (451)
T PRK06189 232 -----GCPLHFVHISSG-KAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGE 305 (451)
T ss_pred -----CCCEEEEECCCH-HHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCC
Confidence 889999999998 99999999999999999999999999999988777888999999999999999999999999
Q ss_pred eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 362 IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 362 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
+++++||++|+....|. ..+|+..+.|+.+++..++.++... .+.+++++++++++|.|||++||++++|+|++|++
T Consensus 306 i~~i~sDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~npA~~lgl~~~G~l~~G~~ 383 (451)
T PRK06189 306 IDMISSDHSPCPPELKE--GDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLETIARLLATNPAKRFGLPQKGRLEVGAD 383 (451)
T ss_pred ceEEECCCCCCCHHHcC--cCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHhCCCCCCcccCCCc
Confidence 99999999999776553 2468889999999999999988765 56679999999999999999999966899999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCccccc
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILA 506 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~~ 506 (507)
|||+|+|++..+.++.. .+.++.. ++||.+....|.|..|+++|++||++|+++....|++++.
T Consensus 384 ADlvi~d~~~~~~~~~~-~~~~~~~-~~p~~g~~~~g~v~~tiv~G~~v~~~g~~~~~~~G~~~~~ 447 (451)
T PRK06189 384 ADFVLVDLDETYTLTKE-DLFYRHK-QSPYEGRTFPGRVVATYLRGQCVYQDGEVFPPPRGQLLRP 447 (451)
T ss_pred CCEEEEcCCCCEEECHH-HhhhcCC-CCCcCCcEEEeEEEEEEECCEEEEECCEEccCCCCcEecC
Confidence 99999999988888766 6666777 9999999999999999999999999999998889999975
No 4
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=2e-56 Score=447.85 Aligned_cols=421 Identities=24% Similarity=0.373 Sum_probs=361.0
Q ss_pred eEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 44 QYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
+++|+|++|+++.+ ..+++|+|+||||++|++..... .+.++||++|++|+|||||+|+|+..++....+++.+.
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~---~~~~~iDa~g~~vlPG~iD~H~H~~~~g~~~~e~~~t~ 78 (425)
T PRK07627 2 KIHIKGGRLIDPAAGTDRQADLYVAAGKIAAIGQAPAGF---NADKTIDASGLIVCPGLVDLSARLREPGYEYKATLESE 78 (425)
T ss_pred eEEEEeeEEECCCCCccceeEEEEECCEEEEecCCCcCC---CCCeEEECCCCEEeccEEeccccccCCCccccCcHHHH
Confidence 58999999998755 35789999999999998753211 26789999999999999999999987777778899999
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-CcccHHHHHHHHHcCCcEEEEcccCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPS 200 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (507)
.+.++.+||||+++++ ++.|.....+.+.............+++.++.+... .+...+++.++.+.|+.+|+.+
T Consensus 79 s~aa~~gGvTtv~~~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~~~G~~~fk~~---- 153 (425)
T PRK07627 79 MAAAVAGGVTSLVCPP-DTDPVLDEPGLVEMLKFRARNLNQAHVYPLGALTVGLKGEVLTEMVELTEAGCVGFSQA---- 153 (425)
T ss_pred HHHHHhCCeeEEEeCC-CCCCCCCCHHHHHHHHHHhhccCceeEEEeCeEEcCCCccCHHHHHHHHhCCEEEEEcC----
Confidence 9999999999999999 777777777766666555555455665555544433 3455678888888899999863
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
..+..+...+.+.++.+++.+.++.+|+|+....+..+. ..+......++..+|...|..++.+.+.+++.+
T Consensus 154 ---~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~----~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~- 225 (425)
T PRK07627 154 ---NVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRGGVA----ASGAVASRLGLSGVPVAAETIALHTIFELMRVT- 225 (425)
T ss_pred ---CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhCCCc----CCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHH-
Confidence 334567888999999999999999999998766443332 333345556678899999999999999999977
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 360 (507)
+.++|+.|+++. .+++.++.++.+|+.+++++||||+.++.+.+...+..++++||+|...+++.+++++.+|
T Consensus 226 ------~~~~hi~HvSs~-~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G 298 (425)
T PRK07627 226 ------GARVHLARLSSA-AGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRDREAIRAALADG 298 (425)
T ss_pred ------CCcEEEEeCCCH-HHHHHHHHHHHCCCCeEEEeccchheEeHhHHhccCCceEEeCCCCCHHHHHHHHHHHhcC
Confidence 889999999999 9999999999999999999999999999998877788999999999999999999999999
Q ss_pred CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 361 ~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
.+++++|||+|+....+. .+|+..+.|+.+++..++.++....+.+++++++++++|.|||++||+ +.|+|++|+.
T Consensus 299 ~id~i~SDHaP~~~~~k~---~~~~~~~~G~~g~e~~~pl~~~~~~~~~i~~~~~l~~~t~~pA~~lg~-~~G~l~~G~~ 374 (425)
T PRK07627 299 TIDAICSDHTPVDDDEKL---LPFAEATPGATGLELLLPLTLKWADEAKVPLARALARITSAPARVLGL-PAGRLAEGAP 374 (425)
T ss_pred CCcEEEcCCCCCCHHHcc---CCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCC-CCCcccCCCc
Confidence 999999999999766553 469999999999999999888887888999999999999999999999 5799999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecC
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEG 493 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g 493 (507)
|||+++|++..|.++.. .+.++.. ++||.+....|+|..||++|++||+++
T Consensus 375 ADlvv~d~~~~~~v~~~-~~~s~~~-~sp~~g~~~~g~v~~t~v~G~~v~~~~ 425 (425)
T PRK07627 375 ADLCVFDPDAHWRVEPR-ALKSQGK-NTPFLGYELPGRVRATLVAGQVAFERR 425 (425)
T ss_pred CCEEEECCCCcEEEChh-hccccCC-CCCCcCCEeeeEEEEEEECCEEEeecC
Confidence 99999999988999877 7788888 999999999999999999999999864
No 5
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=2.3e-56 Score=454.42 Aligned_cols=444 Identities=27% Similarity=0.401 Sum_probs=372.9
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC---CCCCCCCh
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRTEWEGF 118 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~---~~~~~~~~ 118 (507)
.++++|+|++|+++++...++|+|+||+|++|++.. + .+.++||++|++|+|||||+|+|+..+ +....+++
T Consensus 3 ~~d~~i~~~~v~~~~~~~~~~i~I~dg~I~~i~~~~--~---~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~e~~ 77 (477)
T PRK13404 3 AFDLVIRGGTVVTATDTFQADIGIRGGRIAALGEGL--G---PGAREIDATGRLVLPGGVDSHCHIDQPSGDGIMMADDF 77 (477)
T ss_pred CCcEEEECCEEEcCCCceEEEEEEECCEEEEecCCC--C---CCCeEEECCCCEEecCEEEeEEcCCccccCCccccchH
Confidence 356899999999988777899999999999998653 2 256899999999999999999999754 24456788
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccH-HHHHHHHHcCCcEEEEcc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA-SALEALLNAGVLGLKSFM 197 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~ 197 (507)
....+.++.+||||+++++ .+.|.....+.+............+++.++.+.....+... +++.++.+.|+.++|.|+
T Consensus 78 ~~~s~aa~~gGvTtv~~~~-~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~~~G~~~iKi~~ 156 (477)
T PRK13404 78 YTGTVSAAFGGTTTVIPFA-AQHRGQSLREAVEDYHRRAAGKAVIDYAFHLIVADPTEEVLTEELPALIAQGYTSFKVFM 156 (477)
T ss_pred HHHHHHHHcCCccEEEEcc-CCCCCCCHHHHHHHHHHHhccCcEEEEEEEEEecCCChhhHHHHHHHHHHcCCCEEEEEe
Confidence 9999999999999999987 55566666777777766666777888887766654433333 578888889999999987
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHH
Q 010547 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 277 (507)
.+++ +..+++++.++++.++++|.++.+|+++...++...... ...+......++..+|...|..++.+.+.+++
T Consensus 157 ~~~~----~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~-~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~ 231 (477)
T PRK13404 157 TYDD----LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRL-LAAGLTAPKYHAISRPMLAEREATHRAIALAE 231 (477)
T ss_pred cCCC----CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH-HHCCCcchhhccccCCHHHHHHHHHHHHHHHH
Confidence 4321 356789999999999999999999999877654221111 13344455566778999999999999999999
Q ss_pred hhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC---CCCceeEcCCCCChhhHHHHH
Q 010547 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLW 354 (507)
Q Consensus 278 ~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~ 354 (507)
+. |.++|+.|+++. .+++.++.+++.|+.+++++||||+.++.+++.. .++.++++||+|...+++.++
T Consensus 232 ~~-------g~~~hi~Hvs~~-~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~~~d~~aL~ 303 (477)
T PRK13404 232 LV-------DVPILIVHVSGR-EAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGMEGAKYICSPPPRDKANQEAIW 303 (477)
T ss_pred Hh-------CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccccCCceEECCCCCChHHHHHHH
Confidence 76 899999999998 9999999999999999999999999999998866 688999999999999999999
Q ss_pred HHHhcCCeeEEeCCCCCCChhhhc----cc-cCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhC
Q 010547 355 EALMDGHIDMLSSDHSPTVPELKL----LD-EGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 355 ~~l~~G~~~~lgtD~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lg 428 (507)
+++.+|.+++++|||+|+...+|. .. ..+|+.++.|+.+++..++.++.... ..+++++++++++|.|||++||
T Consensus 304 ~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t~~pA~~lg 383 (477)
T PRK13404 304 NGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKLYG 383 (477)
T ss_pred HHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 999999999999999999765431 00 13688899999999999999998755 5579999999999999999999
Q ss_pred C-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCC-CCccccc
Q 010547 429 Q-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAA-CGSPILA 506 (507)
Q Consensus 429 l-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 506 (507)
+ +++|+|++|+.|||+++|.+..+.++.. .+.+... ++||.+....|.|..||++|++||+||+++... .|+|++.
T Consensus 384 l~~~~G~i~~G~~ADlvivd~~~~~~v~~~-~~~~~~~-~sp~~g~~~~g~v~~tiv~G~vv~~~g~~~~~~~~G~~~~~ 461 (477)
T PRK13404 384 LYPRKGAIAIGADADIAIWDPDREVTITNA-DLHHAAD-YTPYEGMRVTGWPVTVLSRGRVVVEDGELVAERGSGQFLAR 461 (477)
T ss_pred CCCCCceecCCCcCCEEEEcCCccEEEchH-HhcccCC-CCcccceEEeeeEEEEEECCEEEEECCEEecCCCceeEecC
Confidence 9 7789999999999999999999988876 6677888 999999999999999999999999999998533 6999874
No 6
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=3.3e-56 Score=452.37 Aligned_cols=442 Identities=45% Similarity=0.754 Sum_probs=379.0
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK 123 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~ 123 (507)
+++|+|++|+++++..+++|+|+||+|++|++.... ++.++||++|++|+|||||+|+|+..++...++++....+
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~i~dg~I~~i~~~~~~----~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~ 76 (443)
T TIGR03178 1 DLIIRGGRVILPNGEREADVGVKGGKIAAIGPDILG----PAAKIIDAGGLVVFPGVVDTHVHINEPGRTEWEGFETGTR 76 (443)
T ss_pred CEEEECcEEECCCCceEEEEEEECCEEEEeeCCCCC----CCCeEEECCCCEEeccEeccccccCCCCccccchHHHHHH
Confidence 478999999999888889999999999999875322 2578999999999999999999998766667788999999
Q ss_pred HHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCC
Q 010547 124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 203 (507)
Q Consensus 124 ~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (507)
.++++||||+++++.++.|.....+.+....+.+.....+++..+++.. +...+++.++.+.|+.+++.|+.+.+..
T Consensus 77 ~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~i~~~~~~G~~~ik~~~~~~~~~ 153 (443)
T TIGR03178 77 AAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLV---PYNLDDLRELDEAGVVGFKAFLSPSGDD 153 (443)
T ss_pred HHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEEeccC---CCCHHHHHHHHHCCCcEEEEEecccCCC
Confidence 9999999999999744567777788888888877777778887765543 3446678888889999999998665444
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCC
Q 010547 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283 (507)
Q Consensus 204 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 283 (507)
..+..+++.+.++++.+++++.++.+|+|+...+....... ..++..+...++..+|...+..++.+.++++++.
T Consensus 154 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~-~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~---- 228 (443)
T TIGR03178 154 EFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEA-PPQGGVGADAYLASRPVFAEVEAIRRTLALAKVT---- 228 (443)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHH-HhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHh----
Confidence 45577899999999999999999999999887655432111 1344455566677889999999999999999976
Q ss_pred CCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCee
Q 010547 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (507)
Q Consensus 284 ~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 363 (507)
+.++|+.|+++. ..++.++.++++|+.+++++|||++.++.+.+...+..++.+||+|...++..+++++++|.++
T Consensus 229 ---g~~vhi~Hiss~-~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~ 304 (443)
T TIGR03178 229 ---GCRVHVVHLSSA-EAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLID 304 (443)
T ss_pred ---CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEECccceEecHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCcc
Confidence 889999999998 8999999999999999999999999999988877788999999999999999999999999999
Q ss_pred EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCc
Q 010547 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHAD 442 (507)
Q Consensus 364 ~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~AD 442 (507)
+++||++|+....|. .++|+.++.|+.+++..++.++... .+.+++++++++++|.|||+++|++++|+|++|+.||
T Consensus 305 ~i~SDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~pA~~~g~~~~G~l~~G~~Ad 382 (443)
T TIGR03178 305 CVVSDHSPCTPDLKR--AGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKRFGLAQKGRIAPGKDAD 382 (443)
T ss_pred EEeCCCCCCChHHcC--cCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCCCCCCccCCCCcCC
Confidence 999999999876653 3578899999999999999888766 4668999999999999999999996679999999999
Q ss_pred EEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCcccc
Q 010547 443 LVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPIL 505 (507)
Q Consensus 443 lvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~ 505 (507)
|+++|.+..+.++.. .+.++.. ++||.+....|.|..||++|++||++|++++...|+|+.
T Consensus 383 ~vi~d~~~~~~~~~~-~~~~~~~-~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~g~~~~ 443 (443)
T TIGR03178 383 FVFVDPDESYTLTPD-DLYYRHK-VSPYVGRTIGGRVRATYLRGQCIYDDEQFIGAPKGQLLL 443 (443)
T ss_pred EEEEcCCCcEEEcHH-HhhhcCC-CCCcCCcEEeeEEEEEEECCEEEEECCeeccCCCCcccC
Confidence 999999888888766 5667777 999999999999999999999999999998777899873
No 7
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=9.9e-56 Score=446.98 Aligned_cols=441 Identities=34% Similarity=0.619 Sum_probs=379.6
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHH
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~ 122 (507)
.+++|+|++|+++++...++|+|+||+|++|++... .+.++||+.|++++|||||+|+|+..+.....+++....
T Consensus 3 ~~~~i~n~~vi~~~~~~~~~i~I~dg~I~~i~~~~~-----~~~~~iD~~G~~v~Pg~iD~h~h~~~~~~~~~e~~~~~~ 77 (449)
T PRK08044 3 FDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLG-----DAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGT 77 (449)
T ss_pred ceEEEECcEEEcCCCCEEEEEEEECCEEEEecCCCC-----CCCeEEECCCCEEcCCeeccccccCCCCccccccHHHHH
Confidence 578999999999877777999999999999986532 156899999999999999999999887766778899999
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCC
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI 202 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (507)
+.++++||||+.+++.++.|.....+.+....+.++....+++.+++++... ...++.++.+.|+.+||.|+.+.+.
T Consensus 78 ~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~~---~~~ei~~l~~~gv~~fk~~~~~~~~ 154 (449)
T PRK08044 78 RAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NLDRLHELDEVGVVGFKCFVATCGD 154 (449)
T ss_pred HHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEEeeeCCC---CHHHHHHHHHcCceEEEEEecccCc
Confidence 9999999999999986667888889999888888888888999888766533 4677788888999999998754321
Q ss_pred ----CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHh
Q 010547 203 ----NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278 (507)
Q Consensus 203 ----~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 278 (507)
.+.+..++..+.+.++.+++.+.++.+|+|+...++..... ....+......++..+|...|..++.+.+.++++
T Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~-~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~ 233 (449)
T PRK08044 155 RGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICDELGEE-AKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKV 233 (449)
T ss_pred ccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHH-HHhcCCCChhhccccCCHHHHHHHHHHHHHHHHH
Confidence 12234567788899999999999999999998875432111 1133334555667788999999999999999998
Q ss_pred hccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHh
Q 010547 279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM 358 (507)
Q Consensus 279 ~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 358 (507)
. |.++|+.|+++. .+.+.++.+++.|..+++++|||++.++.+.+...+..++.+||+|...+++.+++++.
T Consensus 234 ~-------g~~vhi~HiSt~-~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~ 305 (449)
T PRK08044 234 A-------GCRLHVCHISSP-EGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLF 305 (449)
T ss_pred h-------CCCEEEEeCCCH-HHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHh
Confidence 7 889999999998 89999999999999999999999999999998778899999999999999999999999
Q ss_pred cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCCCCCCcccc
Q 010547 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAI 437 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl~~~G~I~~ 437 (507)
+|.+++++|||+|+....+. .+|+.++.|+.+++..++.++.... +.+++++++++++|.|||++||++++|+|++
T Consensus 306 ~G~id~i~sDH~P~~~~~K~---~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl~~~G~i~~ 382 (449)
T PRK08044 306 NGEIDCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAP 382 (449)
T ss_pred CCCceEEEcCCCCCChHHcc---CChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCCCCcCCC
Confidence 99999999999998766653 4689999999999999999887654 6679999999999999999999955799999
Q ss_pred CCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCc-ccCCCCCcccc
Q 010547 438 GNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN-HAPAACGSPIL 505 (507)
Q Consensus 438 G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~-~~~~~~~~~~~ 505 (507)
|++|||+++|++..|.+... .+.++.. ++||.|..+.|.|..|+++|++||++++ +.....|+|++
T Consensus 383 G~~ADlvi~d~~~~~~v~~~-~~~s~~~-~sp~~G~~l~G~v~~t~~~G~~v~~~~~~~~~~~~G~~~~ 449 (449)
T PRK08044 383 GKDADFVFIQPNSSYVLKNE-DLEYRHK-VSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFIL 449 (449)
T ss_pred CCccCEEEECCCCcEEECHH-HccccCC-CCCCCCCEEeeeEEEEEECCEEEEECCccccCCCCcccCC
Confidence 99999999999999999888 7888888 9999999999999999999999999988 44666899875
No 8
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=1.3e-55 Score=450.37 Aligned_cols=445 Identities=51% Similarity=0.870 Sum_probs=379.7
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK 123 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~ 123 (507)
+++|+|++|+++++..+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+..+....++++.+..+
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~I~~g~I~~i~~~~~~~---~~~~~iDa~G~~v~PG~ID~H~H~~~~~~~~~e~~~~~s~ 77 (447)
T cd01315 1 DLVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANT---EAEEVIDAGGLVVMPGLIDTHVHINEPGRTEWEGFETGTK 77 (447)
T ss_pred CEEEECCEEECCCCceEeEEEEECCEEEEEeCCCCCC---CCCeEEECCCCEEeccEeeceeccCCCCccccccHHHHHH
Confidence 4799999999998788899999999999999764312 2678999999999999999999998766667888999999
Q ss_pred HHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCC
Q 010547 124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 203 (507)
Q Consensus 124 ~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (507)
.++++||||+++++.++.|.....+.+....+.......+++..+++.... ..++++++.+.|+.+++.|+.+....
T Consensus 78 aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~ei~~l~~~G~~giKv~~~~~~~~ 154 (447)
T cd01315 78 AAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPG---NLDQLRPLDEAGVVGFKCFLCPSGVD 154 (447)
T ss_pred HHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEEeecCC---CHHHHHHHHHcCCcEEEEEecccCCC
Confidence 999999999999974455777778888888887776677888776544332 46677888888999999987654434
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCC
Q 010547 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283 (507)
Q Consensus 204 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 283 (507)
+.+..+.+.+.++++.+++++.++.+|+++...+........ ..+......++..+|...+..++.+.+.++++.
T Consensus 155 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~-~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~---- 229 (447)
T cd01315 155 EFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAK-AKGKRDYRDYLASRPVFTEVEAIQRILLLAKET---- 229 (447)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHh-hcCCCChHHhhccCCHHHHHHHHHHHHHHHHHh----
Confidence 445678899999999999999999999998876554444322 333334455677789999999999999999976
Q ss_pred CCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCee
Q 010547 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (507)
Q Consensus 284 ~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 363 (507)
|.++|+.|+++. ..++.++.++..|..+++++|||++.++.+.+...+..++.+||+|...++..+++++.+|.++
T Consensus 230 ---g~~ihi~h~s~~-~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~ 305 (447)
T cd01315 230 ---GCRLHIVHLSSA-EAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDID 305 (447)
T ss_pred ---CCCEEEEeCCCH-HHHHHHHHHHHCCCceEEEeccccEEEcHHHccCCCCceEECCCCCChHHHHHHHHHHhCCcee
Confidence 899999999998 9999999999999999999999999999999888889999999999999999999999999999
Q ss_pred EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCC
Q 010547 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHA 441 (507)
Q Consensus 364 ~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~A 441 (507)
+++||+.|.....+.....+|+.++.++.+++..++.++.... +.+++++++++++|.|||+++|+ +++|+|++|++|
T Consensus 306 ~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~A 385 (447)
T cd01315 306 MVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDA 385 (447)
T ss_pred EEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCC
Confidence 9999999998776653345788899999999999998887654 56799999999999999999999 578999999999
Q ss_pred cEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCcccc
Q 010547 442 DLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPIL 505 (507)
Q Consensus 442 Dlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~ 505 (507)
||+++|.+..+.+... .+.+... ++||.+....|.|..||++|++||++|+++....|+++|
T Consensus 386 d~~v~d~~~~~~~~~~-~~~~~~~-~~~~~g~~~~g~v~~ti~~G~~v~~~~~~~~~~~G~~~~ 447 (447)
T cd01315 386 DFVVWDPEEEFTVDAE-DLYYKNK-ISPYVGRTLKGRVHATILRGTVVYQDGEVVGEPLGQLLL 447 (447)
T ss_pred CEEEEcCCCCEEEcHH-HccccCC-CCCccCeEEeeeEEEEEECCEEEEECCeEccCCCceEeC
Confidence 9999999988877665 5666778 999999999999999999999999999998766899986
No 9
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=2e-55 Score=441.23 Aligned_cols=424 Identities=23% Similarity=0.329 Sum_probs=365.4
Q ss_pred cceEEEEecEEECCCCc--eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChh
Q 010547 42 YNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~--~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~ 119 (507)
+.+++|+|++|+++++. .+++|+|+||+|++|++.......+.+.++||++|++|+|||||+|+|+..++....+++.
T Consensus 2 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~G~I~~i~~~~~~~~~~~~~~viDa~G~~v~PG~ID~HvH~~~~~~~~~e~~~ 81 (429)
T PRK09059 2 MRPILLANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDARVFVGEPGAEHRETIA 81 (429)
T ss_pred CcCEEEEeeEEECCCCCcccceEEEEECCEEEEecCccccccCCCCCeEEECCCCEEeccEEecccccCCCCchhhhhHH
Confidence 56789999999998773 4789999999999998753211111256899999999999999999999876666678888
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-CcccHHHHHHHHHcCCcEEEEccc
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMC 198 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 198 (507)
...+.++++||||+++++ ++.|.....+.+....+.+.....+++.+++.+... .++..+++..+.+.|+.+++.
T Consensus 82 ~~s~aa~~gGvTtv~~~p-~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~~~Gv~~f~~--- 157 (429)
T PRK09059 82 SASRAAAAGGVTSIIMMP-DTDPVIDDVALVEFVKRTARDTAIVNIHPAAAITKGLAGEEMTEFGLLRAAGAVAFTD--- 157 (429)
T ss_pred HHHHHHHhCCcEEEEecc-CCCCCCCCHHHHHHHHHHhcccCcccEEEEeEEecCCCCcchHHHHHHHhcCcEEEec---
Confidence 899999999999999999 777888888888888887777778888888777654 345567788888888888763
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHh
Q 010547 199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 278 (507)
...+..+...+.++++.+++.+.++.+|+|+...+...+. +++..+...+...+|...|..++.+.+.+++.
T Consensus 158 ----~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~----~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~ 229 (429)
T PRK09059 158 ----GRRSVANTQVMRRALTYARDFDAVIVHETRDPDLGGNGVM----NEGLFASWLGLSGIPREAEVIPLERDLRLAAL 229 (429)
T ss_pred ----CCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcCCCc----CCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2234456677889999999999999999999887553333 33333445566789999999999999999997
Q ss_pred hccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHh
Q 010547 279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM 358 (507)
Q Consensus 279 ~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 358 (507)
. +.++|+.|+++. .+++.++.+++.|+.+++++||||+.++.+.+..+++.++.+||+|...++..+++++.
T Consensus 230 ~-------~~~~hi~hvs~~-~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~ 301 (429)
T PRK09059 230 T-------RGRYHAAQISCA-ESAEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVA 301 (429)
T ss_pred H-------CCcEEEEecCCH-HHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhccCCccEEcCCCCCHHHHHHHHHHHH
Confidence 6 889999999998 99999999999999999999999999999988778889999999999999999999999
Q ss_pred cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccC
Q 010547 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIG 438 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G 438 (507)
+|.+++++|||+|+....|. .+|+..+.|+.|++..++.++..+.+.+++++++++++|.|||++||++ .|+|++|
T Consensus 302 ~g~id~i~sDh~p~~~~~K~---~~~~~~~~G~~gle~~l~~~~~~v~~~~l~l~~~~~~~s~nPA~~~gl~-~G~l~~G 377 (429)
T PRK09059 302 SGTIDIIVSSHDPQDVDTKR---LPFSEAAAGAIGLETLLAAALRLYHNGEVPLLRLIEALSTRPAEIFGLP-AGTLKPG 377 (429)
T ss_pred cCCCcEEEeCCCCCCHHHCc---CChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-cCcccCC
Confidence 99999999999999887764 3689999999999999999887767778999999999999999999995 6999999
Q ss_pred CCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEe
Q 010547 439 NHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 439 ~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~ 491 (507)
++|||+++|++..|.++.. .+.++.. ++||.|..+.|.|..|+++|++||+
T Consensus 378 ~~ADlvl~d~~~~~~v~~~-~~~s~~~-~sPf~G~~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 378 APADIIVIDLDEPWVVDPE-DLKSRSK-NTPFEEARFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred CcCCEEEECCCCCEEECcc-cCccCCC-CCCCCCCEEeeEEEEEEECCEEEee
Confidence 9999999999999999888 8888888 9999999999999999999999985
No 10
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=3.6e-55 Score=447.72 Aligned_cols=444 Identities=25% Similarity=0.346 Sum_probs=363.1
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC--CCCCCCCh
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGF 118 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~--~~~~~~~~ 118 (507)
++.+++|+|++|++++....++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..+ .....+++
T Consensus 3 ~~~~lli~~~~v~~~~~~~~~~i~I~~g~I~~i~~~~~~~---~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~~~ed~ 79 (486)
T PLN02942 3 SSTKILIKGGTVVNAHHQELADVYVEDGIIVAVAPNLKVP---DDVRVIDATGKFVMPGGIDPHTHLAMPFMGTETIDDF 79 (486)
T ss_pred CCCcEEEECcEEEcCCCCeEeEEEEECCEEEEEcCCCCCC---CCCeEEECCCCEEecCEeeeeeccCcccCCCcccchH
Confidence 3567899999999987767889999999999998764322 257899999999999999999999876 34467889
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCC-HHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH-HcCCcEEEEc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTIS-TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSF 196 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 196 (507)
.+..+.++++||||++|+. .|.... .+.+....+.+. ...+++..+.+.........+++.++. +.|+.+++.|
T Consensus 80 ~s~s~aAl~gGvTTv~D~~---~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~e~~~l~~~~gv~~~k~~ 155 (486)
T PLN02942 80 FSGQAAALAGGTTMHIDFV---IPVNGNLLAGYEAYEKKAE-KSCMDYGFHMAITKWDDTVSRDMETLVKEKGINSFKFF 155 (486)
T ss_pred HHHHHHHHcCCCeEEEeCC---CCCCCCHHHHHHHHHHHHh-hcCCCEEEEEEecCCcHhHHHHHHHHHHhCCCceEEEE
Confidence 9999999999999999985 232223 555555444444 445777766554433222235566664 4588889988
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHH
Q 010547 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 276 (507)
+.+.+ ....+++.+.+.++.+++++.++.+|+|+...+..+..... ..+......+...+|...|..++.+.+.++
T Consensus 156 ~~~~~---~~~~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~-~~G~~~~~~~~~~rP~~~E~~av~~~~~la 231 (486)
T PLN02942 156 MAYKG---SLMVTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMI-ELGITGPEGHALSRPPLLEGEATARAIRLA 231 (486)
T ss_pred EecCC---CCCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH-HcCCCChhhhhccCCchHHHHHHHHHHHHH
Confidence 75432 23468899999999999999999999998776554433221 223334445667789999999999999999
Q ss_pred HhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC----CCCceeEcCCCCChhhHHH
Q 010547 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRDAANKEK 352 (507)
Q Consensus 277 ~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~ 352 (507)
... +.++|+.|+++. .+++.++.+++.|+.+++++||||+.++.+.+.. .+..++++||+|...+++.
T Consensus 232 ~~~-------g~~~~i~H~s~~-~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~ 303 (486)
T PLN02942 232 KFV-------NTPLYVVHVMSI-DAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKA 303 (486)
T ss_pred HHh-------CCCEEEEECCCH-HHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHH
Confidence 876 889999999998 8889999999999999999999999999888753 5788899999999999999
Q ss_pred HHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhc-CCCHHHHHHHHhhchhHHhCC-C
Q 010547 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKY-GVTLEQLASWWSERPAKLAGQ-V 430 (507)
Q Consensus 353 ~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-gls~~~al~~~T~n~A~~lgl-~ 430 (507)
+++++++|+++++|||+++++...+..+.++|+..+.|+.+++..++.++....+. .++++++++++|.|||++||+ +
T Consensus 304 L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i~~~~~l~~~t~~pA~~lgl~~ 383 (486)
T PLN02942 304 LQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKIFNIYP 383 (486)
T ss_pred HHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999988877655689999999999999998888765544 599999999999999999999 6
Q ss_pred CCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC-CCCCcccc
Q 010547 431 SKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP-AACGSPIL 505 (507)
Q Consensus 431 ~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~-~~~~~~~~ 505 (507)
++|+|++|++|||+++|++..+.++.. .+.++.. ++||.+..+.|.|..||++|++||++|+++. ...|++++
T Consensus 384 ~~G~l~~G~~ADlv~vd~~~~~~v~~~-~~~s~~~-~~py~g~~l~g~v~~tiv~G~~v~~~g~~~~~~~~G~~~~ 457 (486)
T PLN02942 384 RKGAILAGSDADIIILNPNSTFTISAK-THHSRID-TNVYEGRRGKGKVEVTISQGRVVWENGELKVVRGSGRYIE 457 (486)
T ss_pred CCCCcCCCCcCCEEEEcCCccEEEcHH-HccccCC-CCCccCcEeeeeEEEEEECCEEEEECCEEeccCCCceEec
Confidence 789999999999999999999999865 5566777 9999999999999999999999999999964 34699886
No 11
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=1.4e-54 Score=444.58 Aligned_cols=441 Identities=27% Similarity=0.420 Sum_probs=367.2
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC--CCCCCChhHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG--RTEWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~--~~~~~~~~~~ 121 (507)
+++|+|++|+++++..+++|+|+||||++|++. + +.++||++|++|+|||||+|+|+..+. ....+++...
T Consensus 2 d~li~n~~v~~~~~~~~~~v~I~~g~I~~i~~~---~----~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~e~~~~~ 74 (459)
T PRK08323 2 STLIKNGTVVTADDTYKADVLIEDGKIAAIGAN---L----GDEVIDATGKYVMPGGIDPHTHMEMPFGGTVSSDDFETG 74 (459)
T ss_pred cEEEECCEEEcCCCceEEEEEEECCEEEEEecC---C----CceEEECCCCEEeccEEeeeeccccccCCccccCcHHHH
Confidence 579999999998888889999999999999875 1 568999999999999999999997542 3456778888
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (507)
.+.++++||||+++++ .+.|.....+.+....+.......+++..+........+..+++.++.+.|+.+++.++.+
T Consensus 75 ~~~a~~~GvTt~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~-- 151 (459)
T PRK08323 75 TRAAACGGTTTIIDFA-LQPKGQSLREALEAWHGKAAGKAVIDYGFHMIITDWNEVVLDEMPELVEEGITSFKLFMAY-- 151 (459)
T ss_pred HHHHHhCCCCEEEeCc-CCCCCCChHHHHHHHHHHhccCceEEEEEEEEecCCcHHHHHHHHHHHHcCCCEEEEEEec--
Confidence 8899999999999987 5555555566666666665566677776655443333344667778888898899988754
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
...+..+++++.++++.+++++.++.+|++....+....... ...+......+...+|...+..++.+.++++...
T Consensus 152 -~~~~~~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~-~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~-- 227 (459)
T PRK08323 152 -KGALMLDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKL-LAEGKTGPEYHALSRPPEVEGEATNRAIMLAELA-- 227 (459)
T ss_pred -CCCCCCCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHH-HHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHh--
Confidence 233568899999999999999999999998766544333211 1233444455677789999999999999999976
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC----CCCceeEcCCCCChhhHHHHHHHH
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRDAANKEKLWEAL 357 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~l 357 (507)
+.++|+.|+++. ++++.++.+++.|+.+++++||||+.++.+.+.. .+..++.+||+|...+++.+++++
T Consensus 228 -----~~~~~i~H~s~~-~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l 301 (459)
T PRK08323 228 -----GAPLYIVHVSCK-EALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGL 301 (459)
T ss_pred -----CCCEEEEeCCCH-HHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHh
Confidence 889999999998 8999999999999999999999999999888754 367889999999999999999999
Q ss_pred hcCCeeEEeCCCCCCChhhhcc-ccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC-CCCCc
Q 010547 358 MDGHIDMLSSDHSPTVPELKLL-DEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ-VSKGA 434 (507)
Q Consensus 358 ~~G~~~~lgtD~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl-~~~G~ 434 (507)
.+|++++++||++|++...+.. ...+|+..+.|+.+.+..++.++... ....++++++++++|.|||++||+ +++|+
T Consensus 302 ~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~ 381 (459)
T PRK08323 302 QDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKIFGLYPRKGT 381 (459)
T ss_pred hcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCcc
Confidence 9999999999999998777652 33468899999999999999988654 455699999999999999999999 77899
Q ss_pred cccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCC-CCCccccc
Q 010547 435 IAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPILA 506 (507)
Q Consensus 435 I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~-~~~~~~~~ 506 (507)
|++|+.|||+++|++..|.++.. .+.+... ++||.+..+.|.|..||++|++||++|+++.. ..|++++.
T Consensus 382 l~~G~~ADlvi~d~~~~~~v~~~-~~~s~~~-~s~~~g~~~~g~v~~viv~G~~v~~~g~~~~~~~~G~~~~~ 452 (459)
T PRK08323 382 IAVGADADIVIWDPNATKTISAS-TLHSNVD-YNPYEGFEVTGWPVTTLSRGEVVVEDGEFRGKAGHGRFLKR 452 (459)
T ss_pred cCCCCcCCEEEEcCCcccccCHH-HHhhcCC-CCcccCcEEeeeEEEEEECCEEEEECCEEeccCCCceEeeC
Confidence 99999999999999998888776 6777777 99999999999999999999999999999865 47999874
No 12
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=1.7e-54 Score=443.89 Aligned_cols=443 Identities=28% Similarity=0.428 Sum_probs=358.7
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC--CCCCCCChhHHH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSGT 122 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~--~~~~~~~~~~~~ 122 (507)
++|+|++|+++++..+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..+ .....+++....
T Consensus 1 ~li~n~~vv~~~~~~~~~V~I~dg~I~~Ig~~~~~~---~~~~vIDa~G~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s 77 (454)
T TIGR02033 1 KLIRGGTVVNADDVFQADVLIEGGKIVAVGRNLSPP---DAVEEIDATGKYVMPGGIDVHTHLEMPFGGTVTADDFFTGT 77 (454)
T ss_pred CEEECcEEEcCCCceEEEEEEECCEEEEecCCCCCC---CCCcEEECCCCEEecCEecceeccCcccCCCCCcchHHHHH
Confidence 479999999988877899999999999998754222 246899999999999999999999765 244667788888
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHH-HHHHHHcCCcEEEEcccCCC
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASA-LEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~ 201 (507)
+.++++||||+++++ .+.|.....+.+....+.......+++..+...........++ +..+.+.|+..++.|+.+
T Consensus 78 ~~a~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~-- 154 (454)
T TIGR02033 78 KAAAAGGTTTIIDFA-LPHKGESLTEALETWHEKAEGKSVIDYGFHMMITHWNDEVLEEHIPELVEEGITSFKVFMAY-- 154 (454)
T ss_pred HHHHhCCCCEEEeCc-CCCCCCCHHHHHHHHHHHhccCceEEEEEEecccCCcHHHHHHHHHHHHhcCCcEEEEEeec--
Confidence 899999999999998 5555555566666666555555566666554332222222333 455556788889887644
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
+..+..+++.+.++++.|++++.++.+|+|............. ..+......+...+|...+..++.+.+.++...
T Consensus 155 -~~~~~~~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~-- 230 (454)
T TIGR02033 155 -KNLLMVDDEELFEILKRAKELGALLQVHAENGDVIAELQARLL-AQGKTGPEYHALSRPPESEAEAVARAIALAALA-- 230 (454)
T ss_pred -CCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHH-HcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHh--
Confidence 2345689999999999999999999999987665443333211 223333344566688888999999999998865
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC---CCCceeEcCCCCChhhHHHHHHHHh
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM 358 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~l~ 358 (507)
+.++|+.|++++ .+++.++.+++.|+.+++++|||++.++.+.+.. .....+.+||+|...+++.+++++.
T Consensus 231 -----~~~~~i~H~s~~-~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~~~~~~~pPlr~~~~~~~l~~~l~ 304 (454)
T TIGR02033 231 -----NAPLYVVHVSTA-SAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEGAKYVCSPPLREKEDQDALWSALS 304 (454)
T ss_pred -----CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCcccccceeEECCCCCChhhHHHHHHHhh
Confidence 889999999998 8899999999999999999999999999888753 4677899999999999999999999
Q ss_pred cCCeeEEeCCCCCCChhhhc-cccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCcc
Q 010547 359 DGHIDMLSSDHSPTVPELKL-LDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAI 435 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~~~G~I 435 (507)
+|+++++|||+.+++...+. .....|+..+.|+.+++..++.++.... +..++++++++++|.|||++||+ +++|+|
T Consensus 305 ~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l 384 (454)
T TIGR02033 305 SGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVATGRITLEKFVELTSTNPAKIFNMYPRKGTI 384 (454)
T ss_pred cCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHcCCCCCCCcc
Confidence 99999999999999876652 2234688889999999999999987655 44699999999999999999999 668999
Q ss_pred ccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCC-CCcccc
Q 010547 436 AIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAA-CGSPIL 505 (507)
Q Consensus 436 ~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~-~~~~~~ 505 (507)
++|++|||+++|++.++.++.. .+.+... ++||.+....|.|..||++|++||++|+++... .|+|++
T Consensus 385 ~~G~~AD~~i~d~~~~~~~~~~-~~~~~~~-~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~g~~~~ 453 (454)
T TIGR02033 385 AVGSDADIVIWDPNRTTVISAE-THHDNAD-YNPFEGFKVQGAVVSVLSRGRVVVEDGQFVGTAGSGRFIK 453 (454)
T ss_pred ccCCcCCEEEEcCCcCeeechH-HhhccCC-CCcccCeEEeeeEEEEEECCEEEEECCEEecCCCCcceec
Confidence 9999999999999999888766 6677778 999999999999999999999999999998654 599986
No 13
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=1.5e-54 Score=432.83 Aligned_cols=414 Identities=27% Similarity=0.385 Sum_probs=362.7
Q ss_pred cceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChh
Q 010547 42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~ 119 (507)
+.+++|+|++|+++.+ ...++|+|+||+|++|++..... +.+.++||++|++|+|||||+|+|+..++....+++.
T Consensus 1 ~~~~~i~n~~v~d~~~~~~~~~~v~I~dg~I~~i~~~~~~~--~~~~~~iDa~G~~vlPG~ID~H~H~~~~~~~~~e~~~ 78 (418)
T PRK07369 1 MSNELLQQVRVLDPVSNTDRIADVLIEDGKIQAIEPHIDPI--PPDTQIIDASGLILGPGLVDLYSHSGEPGFEERETLA 78 (418)
T ss_pred CCCEEEeCeEEECCCCCcccceeEEEECCEEEEecCCcccC--CCCCEEEECCCCEEecCEEecccccCCCCcCCCccHH
Confidence 4578999999998654 46789999999999998654211 1257899999999999999999999888777889999
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC-cccHHHHHHHHHcCCcEEEEccc
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLKSFMC 198 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~ 198 (507)
+..+.++.+||||+++++ ++.|.....+.+....+.++...++++..++.+.... ....+++.++.+.|+.+|+.
T Consensus 79 s~~~aa~~GGvTtv~~~p-n~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~~~Gv~~f~~--- 154 (418)
T PRK07369 79 SLAAAAAAGGFTRVAILP-DTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTELAELAAAGVVGFTD--- 154 (418)
T ss_pred HHHHHHHhCCceEEEECC-CCCCCCCCHHHHHHHHHHhcccCceeEEEEEEEeeCCCCccHhhHHHHHHCCCEEEEC---
Confidence 999999999999999999 7888888999999988888888889999888776543 24567788888889988873
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHh
Q 010547 199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 278 (507)
+.+..+...+.++++.+++++.++.+|+|+...+..++. +++..+...++..+|...|..++.+.+.+++.
T Consensus 155 -----~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~----~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~ 225 (418)
T PRK07369 155 -----GQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNGVM----REGLLALRLGLPGDPASAETTALAALLELVAA 225 (418)
T ss_pred -----CCcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhcCcc----cCChhHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 123456778999999999999999999999887654443 34444555667889999999999999999997
Q ss_pred hccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHh
Q 010547 279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM 358 (507)
Q Consensus 279 ~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 358 (507)
+ +.++|+.|+++. ++++.++.++++|+.+++++||||+.++.+.+..++..++++||+|...+++.+++++.
T Consensus 226 ~-------~~~~hi~HvSs~-~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~ 297 (418)
T PRK07369 226 I-------GTPVHLMRISTA-RSVELIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVR 297 (418)
T ss_pred H-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhccCCCcEECCCCCCHHHHHHHHHHHh
Confidence 6 899999999999 99999999999999999999999999999998777888999999999999999999999
Q ss_pred cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCCCCCCcccc
Q 010547 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAI 437 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl~~~G~I~~ 437 (507)
+|.+++++|||+|+...++. .+|+..+.|+.|++..++.+++... +.+++++++++++|.|||++||++ .|+|++
T Consensus 298 ~G~Id~i~SDHaP~~~~~K~---~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~lgl~-~G~i~~ 373 (418)
T PRK07369 298 TGVIDAIAIDHAPYTYEEKT---VAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQE-PPSLAP 373 (418)
T ss_pred cCCCCEEEcCCCCCCHHHcc---CCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCC-cCcccC
Confidence 99999999999999987764 3699999999999999999997655 567999999999999999999995 599999
Q ss_pred CCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEE
Q 010547 438 GNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATIS 484 (507)
Q Consensus 438 G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v 484 (507)
|++|||+++|++..|.++.. .+.++.. ++||.|..+.|.|..||+
T Consensus 374 G~~ADlvi~d~~~~~~v~~~-~~~s~~~-~sp~~G~~l~G~v~~t~~ 418 (418)
T PRK07369 374 GQPAELILFDPQKTWTVSAQ-TLHSLSR-NTPWLGQTLKGRVLQTWV 418 (418)
T ss_pred CCcCCEEEEcCCCCEEECcc-cccCCCC-CCCCCCCEeeeEEEEEEC
Confidence 99999999999999999988 8889999 999999999999999985
No 14
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=3e-54 Score=440.32 Aligned_cols=435 Identities=29% Similarity=0.442 Sum_probs=359.6
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC--CCCCChhHHH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSGT 122 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~--~~~~~~~~~~ 122 (507)
++|+|++|++++++.+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+..+.. ...+++....
T Consensus 1 lli~~~~v~~~~~~~~~~i~I~~g~I~~ig~~~~~~---~~~~viD~~g~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~ 77 (447)
T cd01314 1 LIIKNGTIVTADGSFKADILIEDGKIVAIGPNLEAP---GGVEVIDATGKYVLPGGIDPHTHLELPFMGTVTADDFESGT 77 (447)
T ss_pred CEEECCEEECCCCceeeeEEEECCEEEEeeCCCCCC---CCceEEECCCCEEecCEEeccccccccccCccCcchHHHHH
Confidence 479999999988888899999999999998764322 14689999999999999999999976532 4567788888
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCC
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI 202 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (507)
+.++.+||||+++++ .+.|.....+.+....+.......+++..+...........+++.++.+.|+.+++.++.+
T Consensus 78 ~~a~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~g~~~ik~~~~~--- 153 (447)
T cd01314 78 RAAAAGGTTTIIDFA-IPNKGQSLLEAVEKWRGKADGKSVIDYGFHMIITDWTDSVIEELPELVKKGISSFKVFMAY--- 153 (447)
T ss_pred HHHHhCCCcEEEeCC-CCCCCCCHHHHHHHHHHHhcCCCcccEEEEEeecCCChHHHHHHHHHHHcCCCEEEEEecc---
Confidence 999999999999997 5556455566666665555555666666555443333344567777777888889988654
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccC
Q 010547 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTD 282 (507)
Q Consensus 203 ~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~ 282 (507)
......+++.++++++.+++++.++.+|+|+...+........ ..+......+...+|...|..++.+.+.+++..
T Consensus 154 ~~~~~~s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~-~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~--- 229 (447)
T cd01314 154 KGLLMVDDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLL-AQGKTGPEYHALSRPPEVEAEATARAIRLAELA--- 229 (447)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH-HcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHh---
Confidence 2334679999999999999999999999987766554433211 223333345566789989999999999998865
Q ss_pred CCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC--C-CCCceeEcCCCCChhhHHHHHHHHhc
Q 010547 283 GPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP--D-GDTRFKCAPPIRDAANKEKLWEALMD 359 (507)
Q Consensus 283 ~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~--~-~~~~~~~~p~~~~~~~~~~~~~~l~~ 359 (507)
+.++|+.|+++. ...+.++.+++.|+.+++++|||++.++.+.+. . .+..++.+||+|...++..+++++++
T Consensus 230 ----~~~~~~~H~s~~-~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~~~g~~~~~~pplr~~~~~~~l~~~l~~ 304 (447)
T cd01314 230 ----GAPLYIVHVSSK-EAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEGAKYVCSPPLRPKEDQEALWDGLSS 304 (447)
T ss_pred ----CCCEEEEeCCCH-HHHHHHHHHHHCCCeEEEecCchhheeCHHHhccccccccceEECCCCCChHHHHHHHHHHhC
Confidence 889999999998 899999999999999999999999999988873 2 57788999999999999999999999
Q ss_pred CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCcccc
Q 010547 360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAI 437 (507)
Q Consensus 360 G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~ 437 (507)
|+++++|||+++++...++....+|+..+.|+.+++..++.++.... ...++++++++++|.|||++||+ +++|+|++
T Consensus 305 G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~ 384 (447)
T cd01314 305 GTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKIFGLYPRKGTIAV 384 (447)
T ss_pred CCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCC
Confidence 99999999999998887776545799999999999999999997765 44599999999999999999999 77899999
Q ss_pred CCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC
Q 010547 438 GNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 438 G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
|++|||+|+|++..+.++.. .+.++.. ++||.+..+.|.|..||++|++||++|+++.
T Consensus 385 G~~AD~vi~d~~~~~~~~~~-~~~~~~~-~~~~~g~~~~g~v~~t~v~G~~v~~~~~~~~ 442 (447)
T cd01314 385 GSDADLVIWDPNAEKTISAD-THHHNVD-YNIFEGMKVKGWPVVTISRGKVVVEDGELVG 442 (447)
T ss_pred CCcCCEEEEeCCcCEEecHH-HhhccCC-CCcccCeEEeeeEEEEEECCEEEEECCEEec
Confidence 99999999999999988766 5667777 9999999999999999999999999999975
No 15
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=1.5e-53 Score=430.72 Aligned_cols=433 Identities=27% Similarity=0.411 Sum_probs=357.7
Q ss_pred cceEEEEecEEECCCC-ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhH
Q 010547 42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS 120 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~ 120 (507)
+++++|+|++|+++++ ...++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..++..+.+++..
T Consensus 2 ~~~~~i~~~~i~~~~~~~~~~~I~I~dg~I~~ig~~~~~~---~~~~vid~~g~~v~PG~ID~H~H~~~~~~~~~e~~~~ 78 (438)
T PRK07575 2 MMSLLIRNARILLPSGELLLGDVLVEDGKIVAIAPEISAT---AVDTVIDAEGLTLLPGVIDPQVHFREPGLEHKEDLFT 78 (438)
T ss_pred cceEEEECCEEECCCCCEEeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEcccEEEeeeccCCCCCcCcchHHH
Confidence 3568999999999766 55789999999999998754322 1358999999999999999999998776778889999
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCC
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS 200 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (507)
..+.++++||||+++++ ++.|.....+.+....+.+.....+++.++++.... ...++... .+..+++.|+...
T Consensus 79 ~~~aa~~gGvTt~~dmp-~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~~~~~---~l~~l~~~--~~~~g~~~f~~~~ 152 (438)
T PRK07575 79 ASRACAKGGVTSFLEMP-NTKPLTTTQAALDDKLARAAEKCVVNYGFFIGATPD---NLPELLTA--NPTCGIKIFMGSS 152 (438)
T ss_pred HHHHHHhCCEEEEEECC-CCCCCCCcHHHHHHHHHHhccCcEEEEEEEcccccc---CHHHHHHh--hCCeEEEEEEeeC
Confidence 99999999999999999 778888889988888888877788998888666532 23333322 3677888875322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
.. ..+......+.++ .+..+.++..|+++...+..... ...+......++..+|...|..++.+.+.++++.
T Consensus 153 ~~-~~~~~~~~~~~~~---~~~~~~~v~~h~e~~~l~~~~~~---~~~g~~~~~~~~~~~p~~aE~~av~~~~~la~~~- 224 (438)
T PRK07575 153 HG-PLLVDEEAALERI---FAEGTRLIAVHAEDQARIRARRA---EFAGISDPADHSQIQDEEAALLATRLALKLSKKY- 224 (438)
T ss_pred CC-CcccCcHHHHHHH---HHhCCCEEEEeCcChHHHHhhhH---hhccCcCcccccccCcHHHHHHHHHHHHHHHHHH-
Confidence 11 1112233444443 33568999999998775332111 1222334455667789999999999999999987
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 360 (507)
+.++|+.|+++. .+++.++..+ +..+++++||||+.++.+++...+..++.+||+|...+++.+++++++|
T Consensus 225 ------g~~lhi~HiSt~-~~v~~i~~~k--~~~vt~ev~phhL~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G 295 (438)
T PRK07575 225 ------QRRLHILHLSTA-IEAELLRQDK--PSWVTAEVTPQHLLLNTDAYERIGTLAQMNPPLRSPEDNEALWQALRDG 295 (438)
T ss_pred ------CCCEEEEECCCH-HHHHHHHHhc--CCCEEEEEchhhheeCHHHHhCCCceEEEeCCCCCHHHHHHHHHHHhCC
Confidence 899999999988 9999998765 4678999999999999998877788999999999999999999999999
Q ss_pred CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 361 ~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
.+++++|||+|++...+. .+|+..+.|+.+++..++.++....+.++|++++++++|.|||++||++++|+|++|++
T Consensus 296 ~id~i~sDh~p~~~~~k~---~~~~~~~~G~~g~e~~l~~l~~~~~~~~lsl~~~~~~~s~npAk~lgl~~~G~L~~G~~ 372 (438)
T PRK07575 296 VIDFIATDHAPHTLEEKA---QPYPNSPSGMPGVETSLPLMLTAAMRGKCTVAQVVRWMSTAVARAYGIPNKGRIAPGYD 372 (438)
T ss_pred CCCEEecCCCCCCHHHcc---CCcccCCCCcccHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHcCCCCCCccCCCCc
Confidence 999999999999987764 36888889999999999999988877789999999999999999999965799999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCcccc
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPIL 505 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~ 505 (507)
|||+++|++.++.++.. .+.++.. ++||.+....|.|..||++|++||++|+++....|++++
T Consensus 373 ADlvi~D~~~~~~v~~~-~~~s~~~-~sp~~g~~~~G~v~~tiv~G~~v~~~g~~~~~~~G~~~~ 435 (438)
T PRK07575 373 ADLVLVDLNTYRPVRRE-ELLTKCG-WSPFEGWNLTGWPVTTIVGGQIVFDRGQVNTEVRGQALT 435 (438)
T ss_pred CCEEEEcCCCCEEEchH-HccccCC-CCCCCCCEEeeEEEEEEECCEEEEECCEEccCCCceEee
Confidence 99999999999988766 7777888 999999999999999999999999999998877899886
No 16
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=1.9e-53 Score=431.58 Aligned_cols=439 Identities=27% Similarity=0.401 Sum_probs=363.0
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHH
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~ 122 (507)
.+++|+|++|++++++..++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|+..++....+++.+..
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~ID~HvH~~~~~~~~~e~~~~~~ 78 (444)
T PRK09236 2 KRILIKNARIVNEGKIFEGDVLIENGRIAKIASSISAK---SADTVIDAAGRYLLPGMIDDQVHFREPGLTHKGDIASES 78 (444)
T ss_pred ccEEEECCEEEcCCCceEeEEEEECCEEEEecCCCCCC---CCCeEEECCCCEECCCEEEcccccccCcccccccHHHHH
Confidence 56799999999987777899999999999998754321 256899999999999999999999876665667888899
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCC
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI 202 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (507)
+.++++||||+++++ ++.|.....+.+....+.+.....+++.++.+.. ....+++.++.+.|+.+++.|+....
T Consensus 79 ~aa~~~GvTtv~d~p-~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~e~~~l~~~g~~g~k~~~~~~~- 153 (444)
T PRK09236 79 RAAVAGGITSFMEMP-NTNPPTTTLEALEAKYQIAAQRSLANYSFYFGAT---NDNLDEIKRLDPKRVCGVKVFMGAST- 153 (444)
T ss_pred HHHHhCCcEEEEeCC-CCCCCcCcHHHHHHHHHHhccCeEEEEEEEeccC---cccHHHHHHHHHccCcEEEEEeccCC-
Confidence 999999999999999 7778778888888877777777788888776443 22366777777789999999865321
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc-cccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT-RSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 203 ~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
...+..+.+.+++++ +..+.++..|+|+...+...........+. .....+...+|...+..++.+.++++++.
T Consensus 154 ~~~~~~~~~~~~~~~---~~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~-- 228 (444)
T PRK09236 154 GNMLVDNPETLERIF---RDAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKH-- 228 (444)
T ss_pred CCcccCcHHHHHHHH---HhcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHH--
Confidence 122233445565664 455899999999876654222110000011 12223445688889999999999999976
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 361 (507)
+.++|+.|+++. ..++.++..+..|.++++++|+|++.++++++...+..++.+|++|...+++.+++++++|+
T Consensus 229 -----~~~~hi~h~st~-~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~ 302 (444)
T PRK09236 229 -----GTRLHVLHISTA-KELSLFENGPLAEKRITAEVCVHHLWFDDSDYARLGNLIKCNPAIKTASDREALRQALADDR 302 (444)
T ss_pred -----CCCEEEEeCCCH-HHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHHhCCC
Confidence 889999999998 99999999999999999999999999999988878899999999999999999999999999
Q ss_pred eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCC
Q 010547 362 IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHA 441 (507)
Q Consensus 362 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~A 441 (507)
+++++||+.++...++. .+|+.++.|+.+++..++.++....+.+++++++++++|.|||++||++++|+|++|+.|
T Consensus 303 i~~igtDh~p~~~~~k~---~~~~~~~~G~~~~e~~l~~l~~~v~~~~~~~~~~~~~~t~~pA~~lgl~~~G~l~~G~~A 379 (444)
T PRK09236 303 IDVIATDHAPHTWEEKQ---GPYFQAPSGLPLVQHALPALLELVHEGKLSLEKVVEKTSHAPAILFDIKERGFIREGYWA 379 (444)
T ss_pred CcEEECCCCCCCHHHhc---CCcccCCCCcccHHHHHHHHHHHHHhcCCCHHHHHHHHHHhHHHhcCCCCCCccccCCcC
Confidence 99999999998766654 368888999999999999888877777899999999999999999999657999999999
Q ss_pred cEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCcccc
Q 010547 442 DLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPIL 505 (507)
Q Consensus 442 Dlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~ 505 (507)
||+++|++.+|.++.. .+.+... ++||.+....|.|..||++|++||++|+++....|++++
T Consensus 380 Dlvi~d~~~~~~~~~~-~~~s~~~-~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~G~~~~ 441 (444)
T PRK09236 380 DLVLVDLNSPWTVTKE-NILYKCG-WSPFEGRTFRSRVATTFVNGQLVYHNGQLVESCRGQRLE 441 (444)
T ss_pred CEEEEcCCCCEEEchH-HhcccCC-CCCCCCCEEeeeEEEEEECCEEEEECCEEccCcCceEee
Confidence 9999999999988877 6777888 999999999999999999999999999998767899886
No 17
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=2.5e-53 Score=429.35 Aligned_cols=433 Identities=29% Similarity=0.441 Sum_probs=359.2
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
+.+++|+|++|+++++...++|+|+||+|++|++....+ +.++||++|++|+|||||+|+|+..++....+++...
T Consensus 4 ~~d~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~----~~~~iD~~G~~v~PG~ID~HvH~~~~~~~~~e~~~t~ 79 (444)
T PRK09060 4 TFDLILKGGTVVNPDGEGRADIGIRDGRIAAIGDLSGAS----AGEVIDCRGLHVLPGVIDSQVHFREPGLEHKEDLETG 79 (444)
T ss_pred cCcEEEECCEEECCCCCeeeEEEEECCEEEEecCCCCCC----CceEEECCCCEEccCEEeccccccCCCCCccchHHHH
Confidence 457899999999988877899999999999998653322 4689999999999999999999987766677889999
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH-HcCCcEEEEcccCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCPS 200 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~ 200 (507)
.+.++++||||+++++ ++.|.....+.+....+.+....++++.++++...... +++.++. ..|+.+++.|+.+.
T Consensus 80 ~~aa~~gGvTtv~~~p-~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~---~~l~el~~~~gv~g~k~fm~~~ 155 (444)
T PRK09060 80 SRAAVLGGVTAVFEMP-NTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRDNA---DELAELERLPGCAGIKVFMGSS 155 (444)
T ss_pred HHHHHhCCcEEEEECC-CCCCCCChHHHHHHHHHHhcccceeeEEEEeccCCCCH---HHHHHHHhhcCceEEEEEeccC
Confidence 9999999999999999 77788888888888888877777888888765543332 3333332 24888999887542
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
. ...+..++..+.++++ ..+..+.+|+|+...+... ... ...+ ....++..+|...|..++.+.+.+++..
T Consensus 156 ~-~~~~~~d~~~l~~~~~---~~~~~v~~H~E~~~l~~~~-~~~-~~~g--~~~~~~~~~p~~aE~~av~~~~~la~~~- 226 (444)
T PRK09060 156 T-GDLLVEDDEGLRRILR---NGRRRAAFHSEDEYRLRER-KGL-RVEG--DPSSHPVWRDEEAALLATRRLVRLARET- 226 (444)
T ss_pred C-CCcccCCHHHHHHHHH---hCCCeEEEECCCHHHHHHH-HHH-HhcC--CcccccccCCHHHHHHHHHHHHHHHHHH-
Confidence 2 1222345556666654 3588999999998764421 111 1222 4455677789999999999999999976
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccC-CCCCCCceeEcCCCCChhhHHHHHHHHhc
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE-IPDGDTRFKCAPPIRDAANKEKLWEALMD 359 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 359 (507)
+.++|+.|+++. ..++.++..++ .+++++||||+.++.+. +..++..++.+||+|...+++.+++++.+
T Consensus 227 ------~~~lhi~h~st~-~~v~~i~~~~~---~vt~ev~ph~l~l~~~~~~~~~~~~~k~~PPlr~~~~~~~l~~al~~ 296 (444)
T PRK09060 227 ------GRRIHVLHVSTA-EEIDFLADHKD---VATVEVTPHHLTLAAPECYERLGTLAQMNPPIRDARHRDGLWRGVRQ 296 (444)
T ss_pred ------CCCEEEEeCCCH-HHHHHHHHhCC---CeEEEeChHHhccCchhhcccCCceEEEeCCCCCHHHHHHHHHHHhC
Confidence 899999999998 88999887655 37899999999999887 66778889999999999999999999999
Q ss_pred CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCC
Q 010547 360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGN 439 (507)
Q Consensus 360 G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~ 439 (507)
|.+++++|||.|+....+.. +|+.++.|+.+++..++.++..+.+.+++++++++++|.|||++||++++|+|++|+
T Consensus 297 G~id~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~~~l~~~~v~~g~l~~~~~~~~~s~~pa~~~gl~~~G~l~~G~ 373 (444)
T PRK09060 297 GVVDVLGSDHAPHTLEEKAK---PYPASPSGMTGVQTLVPIMLDHVNAGRLSLERFVDLTSAGPARIFGIAGKGRIAVGY 373 (444)
T ss_pred CCccEEecCCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCcccCCC
Confidence 99999999999998777643 688889999999999999887766667999999999999999999996689999999
Q ss_pred CCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCccccc
Q 010547 440 HADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILA 506 (507)
Q Consensus 440 ~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~~ 506 (507)
.|||+++|.+..|.++.. .+.++.. ++||.+..+.|.|..|+++|++||++|++.....|++++.
T Consensus 374 ~ADlvl~d~~~~~~v~~~-~~~s~~~-~sp~~g~~l~g~~~~tiv~G~~v~~~g~~~~~~~G~~~~~ 438 (444)
T PRK09060 374 DADFTIVDLKRRETITNE-WIASRCG-WTPYDGKEVTGWPVGTIVRGQRVMWDGELVGPPTGEPVRF 438 (444)
T ss_pred cCCEEEEcCCCCEEEChH-HhcccCC-CCCCCCCEEeeeEEEEEECCEEEEECCEEccCCCccCccc
Confidence 999999999999988876 6777788 9999999999999999999999999999987778998874
No 18
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=9.7e-53 Score=426.23 Aligned_cols=433 Identities=32% Similarity=0.450 Sum_probs=361.6
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
+.+++|+|++|++.+.+.+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+..++....+++.+.
T Consensus 1 ~~dl~i~n~~v~~~~~~~~~~v~I~dg~I~~i~~~~~~~---~~~~~id~~g~~v~PG~ID~H~H~~~~g~~~~e~~~~~ 77 (443)
T PRK02382 1 MRDALLKDGRVYYNNSLQPRDVRIDGGKITAVGKDLDGS---SSEEVIDARGMLLLPGGIDVHVHFREPGYTHKETWYTG 77 (443)
T ss_pred CceEEEECCEEEeCCCceEEEEEEECCEEEEecCCCCCC---CCCeEEECCCCEEcCCEeeeeeeccCCCCCchhhHHHH
Confidence 357899999999877777899999999999998653322 24689999999999999999999987766667888899
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEE-EEcccCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGL-KSFMCPS 200 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 200 (507)
.+.++++||||+++++ .+.|.....+.+....+.+.....+++.++++.. ...+.+.++.+.|+.++ +.|+...
T Consensus 78 ~~aa~~gGvTtv~~~~-~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~~~~----~~~~~l~~l~~~gv~~~gkv~~~~~ 152 (443)
T PRK02382 78 SRSAAAGGVTTVVDQP-NTDPPTVDGESFDEKAELAARKSIVDFGINGGVT----GNWDPLESLWERGVFALGEIFMADS 152 (443)
T ss_pred HHHHHhCCcEEEEECC-CCCCCCChHHHHHHHHHHhCcCceEEEEEEeeec----cchhhHHHHHhcCccceeEEEEEec
Confidence 9999999999999999 7788878788888877777766677777665432 12445677777788887 6665322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
. +....+++.+.++++.+++.+.++..|+++.......... ..+......++..+|...|..++.+.+.++++.
T Consensus 153 ~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~---~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~- 226 (443)
T PRK02382 153 T--GGMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAKL---LKGDADADAWSAYRPAAAEAAAVERALEVASET- 226 (443)
T ss_pred C--CCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHh---hcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHh-
Confidence 1 1124567899999999999999999999987764422111 222234445667789999999999999999976
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 360 (507)
|.++|+.|+++. .+++.++.++ +++++||||+.++.+.+...+..++++||+|...+++.+++++.+|
T Consensus 227 ------g~~~hi~h~ss~-~~~~~i~~~~-----vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~g 294 (443)
T PRK02382 227 ------GARIHIAHISTP-EGVDAARREG-----ITCEVTPHHLFLSRRDWERLGTFGKMNPPLRSEKRREALWERLNDG 294 (443)
T ss_pred ------CCCEEEEECCCH-HHHHHHHHCC-----cEEEEchhhhhcCHHHHhccCceEEEcCCCCChHHHHHHHHHHhCC
Confidence 899999999998 8999988653 8899999999999998877778889999999999999999999999
Q ss_pred CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 361 ~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
.+++++|||+|+....+.. +|+.++.|+.+++..++.++..+.+.+++++++++++|.|||++||++++|+|++|+.
T Consensus 295 ~i~~i~sDh~P~~~~~K~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~l~~~~~~~t~~pA~~~g~~~~G~l~~G~~ 371 (443)
T PRK02382 295 TIDVVASDHAPHTREEKDA---DIWDAPSGVPGVETMLPLLLAAVRKNRLPLERVRDVTAANPARIFGLDGKGRIAEGYD 371 (443)
T ss_pred CCCEEEcCCCCCCHHHhcC---ChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCccCCCCc
Confidence 9999999999998777643 6999999999999999999977777789999999999999999999976899999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCC-CCccccc
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAA-CGSPILA 506 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 506 (507)
|||+++|++..+.+... .+.++.. ++||.+.... .|..||++|+++|++|+++... .|++++.
T Consensus 372 AD~vi~d~~~~~~~~~~-~~~s~~~-~sp~~g~~~~-~v~~tiv~G~~v~~~~~~~~~~~~G~~~~~ 435 (443)
T PRK02382 372 ADLVLVDPDAAREIRGD-DLHSKAG-WTPFEGMEGV-FPELTMVRGTVVWDGDDINAKRGRGEFLRG 435 (443)
T ss_pred CCEEEEcCCCcEEEcHH-HhcccCC-CCCcCCCEec-eEEEEEECCEEEEECCEEecCCCCceEeCC
Confidence 99999999998888766 6677777 9999998866 8899999999999999988654 7999975
No 19
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=1e-53 Score=396.27 Aligned_cols=447 Identities=28% Similarity=0.394 Sum_probs=388.3
Q ss_pred CCcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC--CCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEG 117 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~--~~~~~~~ 117 (507)
..+..++|+|++|++.|.....||+++||.|++|+++..++. +.++||++|++|+||.||.|+|+..+ +...+++
T Consensus 11 v~s~rllikgg~vvN~d~~~~aDV~vedGiI~~vg~~l~ipg---g~~~ida~g~~ViPGgID~Hthlq~p~~G~ts~Dd 87 (522)
T KOG2584|consen 11 VASNRLLIKGGRVVNDDQSFKADVYVEDGIIKEVGENLIIPG---GVKVIDATGKMVIPGGIDPHTHLQMPFMGMTSVDD 87 (522)
T ss_pred ccccceeeeCCEEEccCCceeeeEEeccCEEEEecccEEcCC---CceEEecCCcEEecCccCccceeccccCCccchhh
Confidence 346679999999999999999999999999999999987764 78999999999999999999999987 7788999
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH-HcCCcEEEEc
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSF 196 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 196 (507)
+.+..++++.+|+|+++|+++ ..+..+..+.++.....++.+..++++++.++..=.+.-.++++-+. ..|..+|+.|
T Consensus 88 F~~GTkAAlaGGtTmiID~vl-p~~~~slv~afe~wr~~Ad~k~cCDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~f 166 (522)
T KOG2584|consen 88 FFQGTKAALAGGTTMIIDFVL-PDKGTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFF 166 (522)
T ss_pred hhcccHHHhcCCceEEEEEec-CCCCchHHHHHHHHHhhcCCceeeeeeeeEeeeecCcchHHHHHHHhhhcCcceEEee
Confidence 999999999999999999983 23345668889999999999999999999999887776677777665 4799999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHH
Q 010547 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 276 (507)
+.+ .+.+..++++|++.++.+++.+...++|+|+.+.+.....+.. ..+......+..++|+..|.+++.+.+.++
T Consensus 167 may---k~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l-~~gitgPEgh~lSRPee~EaEA~~rai~ia 242 (522)
T KOG2584|consen 167 MAY---KDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLL-ELGITGPEGHELSRPEELEAEATNRAITIA 242 (522)
T ss_pred eee---ccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHH-HcCCcCcccccccCchhhhHHHHHHHHHHH
Confidence 866 5567899999999999999999999999999998776655543 444445555667899999999999999999
Q ss_pred HhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC----CCCCceeEcCCCCChh-hHH
Q 010547 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP----DGDTRFKCAPPIRDAA-NKE 351 (507)
Q Consensus 277 ~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~-~~~ 351 (507)
.+. ..++.++|+.+. ...+.+..+++.|--+..+.....+..+...+- ...+.+..+||+|... ...
T Consensus 243 ~~~-------ncPlyvvhVmsk-saa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~ 314 (522)
T KOG2584|consen 243 RQA-------NCPLYVVHVMSK-SAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPD 314 (522)
T ss_pred Hhc-------CCCcceEEEeeh-hHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHH
Confidence 987 777999999887 888999999888766555444444444433332 2466788999998655 778
Q ss_pred HHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcC-CCHHHHHHHHhhchhHHhCC-
Q 010547 352 KLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAGQ- 429 (507)
Q Consensus 352 ~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g-ls~~~al~~~T~n~A~~lgl- 429 (507)
.++++|..|..-..|||+++++...+.++.++|...+.|++|++.+|+.+|......| +++.+.+...++|.|+++++
T Consensus 315 ~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstnaAkifnlY 394 (522)
T KOG2584|consen 315 GLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLY 394 (522)
T ss_pred HHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEecccchhheecc
Confidence 8999999999999999999999999999999999999999999999999998876654 89999999999999999999
Q ss_pred CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcc-cCCCCCccc
Q 010547 430 VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNH-APAACGSPI 504 (507)
Q Consensus 430 ~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~-~~~~~~~~~ 504 (507)
+++|+|++|++||+||||++....+... ...+... +..|+|....|.+.-|+..|++||.+|++ +..+.|||+
T Consensus 395 prKGrIavGsDADiVIwdp~at~tIS~~-th~~~~d-~NifEGm~~~G~plvtIsrGriv~eng~~~v~~g~G~fi 468 (522)
T KOG2584|consen 395 PRKGRIAVGSDADIVIWDPNATKTISAK-THHSAND-FNIFEGMTVHGVPLVTISRGRVVYENGNLVVTEGSGRFI 468 (522)
T ss_pred CcCceecccCCCcEEEECCCcceEeccc-ccccccc-ceeecCcEecceeEEEEeCCeEEEecCcEEEecCCCcee
Confidence 9999999999999999999999999888 7788888 99999999999999999999999999999 467888886
No 20
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=1.1e-51 Score=418.26 Aligned_cols=419 Identities=32% Similarity=0.481 Sum_probs=351.5
Q ss_pred eEEEEecEEECCCC-ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHH
Q 010547 44 QYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122 (507)
Q Consensus 44 ~~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~ 122 (507)
+++|+|++|+++++ +.+++|.|+||+|.+|++.... ++.++||++|++|+|||||+|+|+..++....+.+....
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~I~I~dg~I~~i~~~~~~----~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~e~~~~~~ 77 (423)
T PRK09357 2 MILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIEA----EGAEVIDATGLVVAPGLVDLHVHLREPGQEDKETIETGS 77 (423)
T ss_pred cEEEEeEEEECCCCCcceeeEEEECCEEEEeeCCCCC----CCCeEEECCCCEEeCCEEecccccCCCCccccccHHHHH
Confidence 47999999998854 5689999999999999865221 256899999999999999999999776666778889999
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-CcccHHHHHHHHHcCCcEEEEcccCCC
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (507)
+.++++||||+++++ .+.|.....+.+....+.+.....+++..++.+... .....+++.++.+.|+.+++.
T Consensus 78 ~~a~~~GvTt~~d~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~------ 150 (423)
T PRK09357 78 RAAAAGGFTTVVAMP-NTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKGLAGEELTEFGALKEAGVVAFSD------ 150 (423)
T ss_pred HHHHhCCCeEEEecC-CCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeCCCCccHHHHHHHHhCCcEEEEC------
Confidence 999999999999998 777877778888888887777776777776554322 123456666666677766653
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
.+....+++.++++++.+++++.++.+|+++.......+. ..+......+...+|...|...+.+.+.++++.
T Consensus 151 -~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~----~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~-- 223 (423)
T PRK09357 151 -DGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGGVM----NEGEVSARLGLPGIPAVAEEVMIARDVLLAEAT-- 223 (423)
T ss_pred -CCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhcccc----cCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHH--
Confidence 2233567889999999999999999999998765443332 222223345567789999999999999999876
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 361 (507)
|.++|+.|+++. ...+.++.+++.|+.+++++|||++.++.+.+..++..++.+||+|...++..+++++++|.
T Consensus 224 -----g~~~hi~H~s~~-~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~ 297 (423)
T PRK09357 224 -----GARVHICHVSTA-GSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNYKVNPPLRTEEDREALIEGLKDGT 297 (423)
T ss_pred -----CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEechHHheEcHHHHhCcCCceEECCCCCCHHHHHHHHHHHHcCC
Confidence 899999999998 99999999999999999999999999999988777888999999999999999999999999
Q ss_pred eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 362 IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 362 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
++++|||++|++...+.. +|+..+.|+.+++..++.++... .+.+++++++++++|.|||+++|++. |+|++|++
T Consensus 298 ~~~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~A~~~g~~~-G~i~~G~~ 373 (423)
T PRK09357 298 IDAIATDHAPHAREEKEC---EFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARILGLPA-GPLAEGEP 373 (423)
T ss_pred CeEEecCCCCCChHHccC---CHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCC-CccCCCCc
Confidence 999999999998776642 58889999999999999888744 45579999999999999999999954 99999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
|||+++|.+..|.++.. .+.++.. ++||.+..+.|.|..||++|++||++
T Consensus 374 AD~~i~d~~~~~~v~~~-~~~~~~~-~~p~~g~~~~g~v~~t~v~G~~v~~~ 423 (423)
T PRK09357 374 ADLVIFDPEAEWTVDGE-DFASKGK-NTPFIGMKLKGKVVYTIVDGKIVYQD 423 (423)
T ss_pred CCEEEEcCCCCEEEchh-hcccCCC-CCCCcCCEEeeEEEEEEECCEEEecC
Confidence 99999999999888766 6677788 99999999999999999999999975
No 21
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=3.8e-52 Score=413.57 Aligned_cols=383 Identities=25% Similarity=0.316 Sum_probs=329.4
Q ss_pred EEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCC
Q 010547 63 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDP 142 (507)
Q Consensus 63 I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p 142 (507)
|+|+||||++|++.. . +.++||++|++|+|||||+|+|+..++.. .+++.+..+.++++||||+++++ ++.|
T Consensus 1 i~I~dG~I~~i~~~~--~----~~~viDa~g~~vlPG~ID~HvH~~~~~~~-~e~~~t~s~aA~aGGvTtv~dmp-nt~P 72 (386)
T PRK08417 1 IRIKDGKITEIGSDL--K----GEEILDAKGKTLLPALVDLNVSLKNDSLS-SKNLKSLENECLKGGVGSIVLYP-DSTP 72 (386)
T ss_pred CEEECCEEEEecCCC--C----CCeEEECCCCEEccCeeEEeeeeCCCCcC-hhhHHHHHHHHHcCCcEEEEeCC-CCCC
Confidence 689999999998653 1 57899999999999999999999876544 58899999999999999999999 7788
Q ss_pred CCCCHHHHHHHHHHHhc--CceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHH
Q 010547 143 STISTETLKLKVDAAEK--RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVL 220 (507)
Q Consensus 143 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 220 (507)
.....+.+....+.+.. ...+++.. .. ..++..+++..+.+.|+.+++.+ + ..+++.+.++++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~i~~l~~~Gv~~~k~~-------~--~~~~~~l~~~~~~a 139 (386)
T PRK08417 73 AIDNEIALELINSAQRELPMQIFPSIR---AL-DEDGKLSNIATLLKKGAKALELS-------S--DLDANLLKVIAQYA 139 (386)
T ss_pred CCCCHHHHHHHHHHhhccCCcEEEEEE---EE-CCCccHHHHHHHHHCCCEEEECC-------C--CCCHHHHHHHHHHH
Confidence 88888888877766554 23344322 22 23445778888888999888752 1 46788999999999
Q ss_pred HhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH
Q 010547 221 ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS 300 (507)
Q Consensus 221 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~ 300 (507)
++.+.++..|+|+...+...+. .++..+...++..+|...|..++.+.+.+++++ +.++|+.|++++ .
T Consensus 140 ~~~g~~V~~HaEd~~~~~~~~~----~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~-------~~~lhi~hvS~~-~ 207 (386)
T PRK08417 140 KMLDVPIFCRCEDSSFDDSGVM----NDGELSFELGLPGIPSIAETKEVAKMKELAKFY-------KNKVLFDTLALP-R 207 (386)
T ss_pred HHcCCEEEEeCCCHHHhhHHHH----hcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHh-------CCCEEEEeCCCH-H
Confidence 9999999999999877654443 334445666778899999999999999999977 889999999999 9
Q ss_pred HHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccc
Q 010547 301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLD 380 (507)
Q Consensus 301 ~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~ 380 (507)
+++.++.+++.|+.+++++||||+.++.+++..++..++.+||+|...+++.+++++.+|.+++++|||+|+...+|.
T Consensus 208 ~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~-- 285 (386)
T PRK08417 208 SLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSKKD-- 285 (386)
T ss_pred HHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHcc--
Confidence 999999999999999999999999999998877788999999999999999999999999999999999999877664
Q ss_pred cCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCC
Q 010547 381 EGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHP 459 (507)
Q Consensus 381 ~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~ 459 (507)
.+|+.++.|+.+++..++.++.... +.+++++++++++|.|||++||+++ |+|++|+.|||+++|.+..+.++..
T Consensus 286 -~~~~~a~~G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~lgl~~-G~l~~G~~ADlvi~d~~~~~~~~~~-- 361 (386)
T PRK08417 286 -LAFDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLGLNS-GEIEVGKEADLVLFDPNESTIIDDN-- 361 (386)
T ss_pred -CCHhHCCCCchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCCC-CccCCCCcCCEEEEcCCCCeEeCCC--
Confidence 3689999999999999999998765 4569999999999999999999964 9999999999999999987776543
Q ss_pred cccCCCCCccccCcEEeeEEEEEEECCEEEEe
Q 010547 460 VHMKHPSISAYLGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~ 491 (507)
++||.+..+.|.|..||++|++||.
T Consensus 362 -------~~p~~g~~~~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 362 -------FSLYSGDELYGKIEAVIIKGKLYLE 386 (386)
T ss_pred -------CCCccCCEEeccEEEEEECCEEEeC
Confidence 8999999999999999999999984
No 22
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=7.1e-52 Score=410.34 Aligned_cols=404 Identities=25% Similarity=0.337 Sum_probs=335.8
Q ss_pred EEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHH
Q 010547 46 WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAA 125 (507)
Q Consensus 46 ~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~ 125 (507)
.|.| ++++.+....++|+|+||||++|++... +.++||++| +|+|||||+|+|+..++....+++.+..+++
T Consensus 2 ~~~~-~~~~~~~~~~~di~I~dGkI~~i~~~~~------~~~~ida~g-~vlPG~ID~HvH~r~pg~~~ked~~s~s~AA 73 (409)
T PRK01211 2 AICG-NFYYKGKFDYLEIEVEDGKIKSIKKDAG------NIGKKELKG-AILPAATDIHVHFRTPGETEKEDFSTGTLSA 73 (409)
T ss_pred eeec-eeEEcCcEEEEEEEEECCEEEEecCCCC------CceEEEecc-EEcCCeEEeeeccCCCCCcccCcHHHHHHHH
Confidence 4544 4455556678999999999999986542 467999999 9999999999999999888999999999999
Q ss_pred HhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCC
Q 010547 126 AAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDF 205 (507)
Q Consensus 126 l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 205 (507)
+.+||||++++| ++.|.....+.+....+.++....+++.++++...... ++.+.|+.+++.|+.+......
T Consensus 74 aaGGvTtv~dmP-nt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~~~~~-------~~~~~g~~~~k~f~~~~~~~~~ 145 (409)
T PRK01211 74 IFGGTTFIMDMP-NNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNNA-------LILDERSIGLKVYMGGTTNTNG 145 (409)
T ss_pred HcCCcEEEEECC-CCCCCCChHHHHHHHHHHhccCceeeEEEEeccCCchh-------hHHhccCcEEEEEcCCCcCCCc
Confidence 999999999999 78888899999999998888888999988876633221 1234488999998643111000
Q ss_pred CCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCC
Q 010547 206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (507)
Q Consensus 206 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 285 (507)
..... ..++.+++.+.++.+|+|+...++.+.... . ....+...+|...|..++.+.+.++.+
T Consensus 146 ~~~~~----~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~----~--~~~~~~~~rP~~aE~~ai~~~~~la~~------- 208 (409)
T PRK01211 146 TDIEG----GEIKKINEANIPVFFHAELSECLRKHQFES----K--NLRDHDLARPIECEIKAVKYVKNLDLK------- 208 (409)
T ss_pred cccCH----HHHHHHHccCCEEEEeccChHHhhhhhhCc----c--hHhhCCCCCCHHHHHHHHHHHHHHhCC-------
Confidence 01122 244666789999999999988755433221 1 223467779999999999999998884
Q ss_pred CCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEE
Q 010547 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDML 365 (507)
Q Consensus 286 ~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~l 365 (507)
++|+.|+++. .++ ..+++++||||+.++.+. ..++.++++||+|...+++.+++++.+|.++++
T Consensus 209 ---~~hi~HvSt~-~~~----------~~vt~Ev~phhL~l~~~~--~~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i 272 (409)
T PRK01211 209 ---TKIIAHVSSI-DVI----------GRFLREVTPHHLLLNDDM--PLGSYGKVNPPLRDRWTQERLLEEYISGRFDIL 272 (409)
T ss_pred ---CcEEEEecCh-hhc----------CceEEEecHHHHcccccc--ccCCceeEcCCCCCHHHHHHHHHHHhCCCCCEE
Confidence 3999999997 544 268999999999999887 367899999999999999999999999999999
Q ss_pred eCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEE
Q 010547 366 SSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVV 445 (507)
Q Consensus 366 gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvv 445 (507)
+|||+|+...++ .+|+.++.|+.+++..++.++....+.++|+++++++.|.|||++||++ +|+|++|++|||+|
T Consensus 273 ~SDHaP~~~~eK----~~~~~a~~G~~gle~~lpl~~~~v~~~~isl~~~v~~~s~nPAki~gl~-kG~l~~G~~ADlvi 347 (409)
T PRK01211 273 SSDHAPHTEEDK----QEFEYAKSGIIGVETRVPLFLALVKKKILPLDVLYKTAIERPASLFGIK-KGKIEEGYDADFMA 347 (409)
T ss_pred eCCCCCCChhHh----CCHhhCCCCCCcHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCC-CCcccCCCcCCEEE
Confidence 999999987665 2689999999999999999997666778999999999999999999995 79999999999999
Q ss_pred EcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCccccc
Q 010547 446 WEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILA 506 (507)
Q Consensus 446 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~~ 506 (507)
+|++..|.++.. .+.++.. ++||.|.... .|..|+++|++||++|++.....|+|++.
T Consensus 348 ~D~~~~~~v~~~-~~~s~~~-~spf~G~~~~-~v~~tiv~G~~v~~~~~~~~~~~G~~~~~ 405 (409)
T PRK01211 348 FDFTNIKKINDK-RLHSKCP-VSPFNGFDAI-FPSHVIMRGEVVIDNYELISERTGKFVPK 405 (409)
T ss_pred EcCCCeEEEChH-HhhccCC-CCCCCCCEec-cEEEEEECCEEEEECCEEccccCceEecc
Confidence 999999998877 7788888 9999999988 99999999999999999986678999874
No 23
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=1.9e-51 Score=412.77 Aligned_cols=406 Identities=33% Similarity=0.485 Sum_probs=349.0
Q ss_pred ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCC
Q 010547 58 VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 58 ~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~ 137 (507)
+.+++|+|+||||++|++.. .+ .+.++||++|++|+|||||+|+|+..+.....+++....+.++++||||+++++
T Consensus 3 ~~~~~v~I~~g~I~~i~~~~-~~---~~~~~ida~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~ 78 (411)
T TIGR00857 3 ETEVDILVEGGRIKKIGKLR-IP---PDAEVIDAKGLLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMP 78 (411)
T ss_pred eEEEEEEEECCEEEEeeccC-CC---CCCeEEECCCCEEecCEEEcccCCCCCCCccHhHHHHHHHHHHhCCeEEEEEec
Confidence 45789999999999997522 11 246799999999999999999999865555567788889999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcc-cHHHHHHHHHcCCcE--EEEcccCCCCCCCCCCCHHHHH
Q 010547 138 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY-NASALEALLNAGVLG--LKSFMCPSGINDFPMTNASHIK 214 (507)
Q Consensus 138 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~l~ 214 (507)
.+.|.....+.+....+.++....+++..++++...... ...++.++...|+.+ ++.+ +.+..++..+.
T Consensus 79 -~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~~~Gv~g~~f~~~-------~~~~~~~~~l~ 150 (411)
T TIGR00857 79 -NTKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQGNQGKELTEAYELKEAGAVGRMFTDD-------GSEVQDILSMR 150 (411)
T ss_pred -CCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEecCCccccHHHHHHHHHCCcEEEEEEeC-------CcccCCHHHHH
Confidence 677777778888888888877778899888877654432 356677777789988 5542 23457889999
Q ss_pred HHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEe
Q 010547 215 EGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVH 294 (507)
Q Consensus 215 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h 294 (507)
++++.+++++.++.+|+|+...+...+.. .+......++..+|...|..++.+.+.+++.. +.++|+.|
T Consensus 151 ~~~~~a~~~g~~v~iH~E~~~l~~~~~~~----~g~~~~~~~~~~~p~~aE~~ai~~~~~la~~~-------~~~~~i~H 219 (411)
T TIGR00857 151 RALEYAAIAGVPIALHAEDPDLIYGGVMH----EGPSAAQLGLPARPPEAEEVAVARLLELAKHA-------GCPVHICH 219 (411)
T ss_pred HHHHHHHHcCCEEEEecCCHHHHhhhhhc----CCcccHhhCCCCCCHHHHHHHHHHHHHHHHHH-------CCCEEEEe
Confidence 99999999999999999998876544332 23334556778899999999999999999976 88999999
Q ss_pred cCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCCh
Q 010547 295 LSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP 374 (507)
Q Consensus 295 ~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~ 374 (507)
+++. .+++.++.++++|+.+++++||||+.++.+.+...+..++++||+|...++..+++++.+|.+++++||+.|+..
T Consensus 220 vs~~-~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~ 298 (411)
T TIGR00857 220 ISTK-ESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTL 298 (411)
T ss_pred CCCH-HHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCh
Confidence 9998 999999999999999999999999999999888788999999999999999999999999999999999999987
Q ss_pred hhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEe
Q 010547 375 ELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFEL 454 (507)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~ 454 (507)
..+. .+|+..+.|+.+++..++.++....+.+++++++++++|.|||+++|+++.|+|++|+.|||+++|.+..+.+
T Consensus 299 ~~k~---~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~G~l~~G~~ADlvi~d~~~~~~~ 375 (411)
T TIGR00857 299 EEKT---KEFAAAPPGIPGLETALPLLLQLLVKGLISLKDLIRMLSINPARIFGLPDKGTLEEGNPADITVFDLKKEWTI 375 (411)
T ss_pred HHcc---CCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHhHHHHHHhCCCCCCccCCCCcCCEEEEcCCCCEEE
Confidence 6653 3688999999999999999998777778999999999999999999995569999999999999999999888
Q ss_pred CCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 455 DNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
+.. .+.+... ++||.+....|.|..|+++|++||+|
T Consensus 376 ~~~-~~~~~~~-~sp~~g~~~~g~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 376 NAE-TFYSKAK-NTPFEGMSLKGKPIATILRGKVVYED 411 (411)
T ss_pred chH-HCccCCC-CCCcCCCEEEeEEEEEEECCEEEecC
Confidence 766 6677777 99999999999999999999999975
No 24
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=1.1e-49 Score=395.24 Aligned_cols=396 Identities=29% Similarity=0.436 Sum_probs=325.5
Q ss_pred EecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHh
Q 010547 48 TSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAA 127 (507)
Q Consensus 48 ~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~ 127 (507)
.+++|++.+++.+++|+|+||+|++|++. .. ++.++||++|++|+|||||+|+|+........+++.+..+.+++
T Consensus 2 ~~~~v~~~~~~~~~~i~i~~G~I~~i~~~-~~----~~~~~iD~~g~~v~PG~ID~HvH~~~~~~~~~e~~~~~~~aa~~ 76 (398)
T PRK04250 2 LEGKFLLKGRIVEGGIGIENGRISKISLR-DL----KGKEVIKVKGGIILPGLIDVHVHLRDFEESYKETIESGTKAALH 76 (398)
T ss_pred eeEEEEECCcEEEEEEEEECCEEEEeeCC-CC----CCCeEEECCCCEEccCEEeccccccCCCCCcHHHHHHHHHHHHh
Confidence 47889998888899999999999999741 11 15689999999999999999999976655566788899999999
Q ss_pred CCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 010547 128 GGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPM 207 (507)
Q Consensus 128 ~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 207 (507)
+||||+++++ ++.|.....+.+....+.++...++++.+++ .... ..+++.++.. ..++.|+.... ..
T Consensus 77 gGvTtv~~~p-~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~---~~~~l~~l~~---~~~k~f~~~~~----~~ 144 (398)
T PRK04250 77 GGITLVFDMP-NTKPPIMDEKTYEKRMRIAEKKSYADYALNF-LIAG---NCEKAEEIKA---DFYKIFMGAST----GG 144 (398)
T ss_pred CCeEEEEECC-CCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-ecCC---CHHHHHHHHh---hheEEEEecCC----Cc
Confidence 9999999999 8888889999999998888888899998887 4332 2333444432 24666653311 11
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 010547 208 TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 287 (507)
Q Consensus 208 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g 287 (507)
...+.+... ..+.+..+.+|+|+...+. .+..+|...|..++.+.+.+++++ +
T Consensus 145 ~~~~~~~~~---~~~~~~~v~~H~E~~~~~~-----------------~~~~~p~~aE~~av~r~~~la~~~-------~ 197 (398)
T PRK04250 145 IFSENFEVD---YACAPGIVSVHAEDPELIR-----------------EFPERPPEAEVVAIERALEAGKKL-------K 197 (398)
T ss_pred hhHHHHHHH---HHhcCCeEEEEecChhhhh-----------------cccCCCHHHHHHHHHHHHHHHHHh-------C
Confidence 112222211 2233567999999876522 134679999999999999999977 8
Q ss_pred ceEEEEecCChhHHHHHHHHHHhCCCC-EEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEe
Q 010547 288 AHLHIVHLSDASSSLDLLMEAKTNGDS-ITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLS 366 (507)
Q Consensus 288 ~~~~~~h~~~~~~~~~~i~~~~~~g~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lg 366 (507)
.++|+.|+++. .+++.++. .|+. +++++||||+.++.+.+ ..++.++++||+|...+++.+++++.. +++++
T Consensus 198 ~~lhi~HvSt~-~~~~~i~~---~g~~~vt~Ev~ph~L~l~~~~~-~~~~~~k~~PPLR~~~d~~aL~~~l~~--Id~i~ 270 (398)
T PRK04250 198 KPLHICHISTK-DGLKLILK---SNLPWVSFEVTPHHLFLTRKDY-ERNPLLKVYPPLRSEEDRKALWENFSK--IPIIA 270 (398)
T ss_pred CCEEEEeCCCH-HHHHHHHH---cCCCcEEEEeCHHHhccCHHHH-CCCCceEEcCCCCCHHHHHHHHHhhcc--CCEEE
Confidence 99999999998 88888854 4886 99999999999999988 578899999999999999999999964 88999
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEE
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVW 446 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvl 446 (507)
|||+|+...++. ..+.|+.|++..++.++....+.++|++++++++|.|||++||+++.| |++|++|||+++
T Consensus 271 sDHaP~~~~~k~-------~~~~G~~g~e~~lpl~~~~v~~~~lsl~~~v~~~t~npAk~lgl~~~G-L~~G~~ADlvi~ 342 (398)
T PRK04250 271 SDHAPHTLEDKE-------AGAAGIPGLETEVPLLLDAANKGMISLFDIVEKMHDNPARIFGIKNYG-IEEGNYANFAVF 342 (398)
T ss_pred cCCcccCHHHhh-------cCCCCcchHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCcC-ccCCCcCCEEEE
Confidence 999999877653 135799999999999998767778999999999999999999996679 999999999999
Q ss_pred cCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCccc
Q 010547 447 EPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPI 504 (507)
Q Consensus 447 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~ 504 (507)
|++..|.++.. .+.++.. ++||.+..+.|.|..||++|++||++|++++..+|+++
T Consensus 343 D~~~~~~v~~~-~~~s~~~-~sp~~g~~l~g~v~~tiv~G~~v~~~g~~~~~~~G~~~ 398 (398)
T PRK04250 343 DMKKEWTIKAE-ELYTKAG-WTPYEGFKLKGKVIMTILRGEVVMEDDEIIGKPRGVRI 398 (398)
T ss_pred cCCCcEEEChh-hccccCC-CCCCCCCEEeeEEEEEEECCEEEEECCEEcCCCCCeEC
Confidence 99999988877 6777777 99999999999999999999999999999887788764
No 25
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=1.6e-45 Score=361.64 Aligned_cols=361 Identities=34% Similarity=0.464 Sum_probs=311.7
Q ss_pred CCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc
Q 010547 93 EAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV 172 (507)
Q Consensus 93 g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (507)
|++|+||+||+|+|+..++....+++.+..+.++.+||||++++| ++.|.....+.+....+.++....+++.++++..
T Consensus 1 G~~vlPG~iD~HvH~r~pg~~~~ed~~s~t~aA~~GGvTtv~~mP-nt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~~~ 79 (361)
T cd01318 1 GLLILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMP-NTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGVT 79 (361)
T ss_pred CCEEecCeeEeeecCCCCCCCccCcHHHHHHHHHcCCCEEEEECC-CCCCCCCcHHHHHHHHHHhccCceeEEEEEEeec
Confidence 689999999999999988888899999999999999999999999 8889999999999998888888899999887754
Q ss_pred CCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccc
Q 010547 173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 252 (507)
.. +.+.++.+.|..+++.|+.+... .. ..+...+.++++.++ .++.+|+|+.+.+.......+ .
T Consensus 80 ~~-----~~l~~~~~~~~~g~k~f~~~~~~-~~-~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~------~ 143 (361)
T cd01318 80 GS-----EDLEELDKAPPAGYKIFMGDSTG-DL-LDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELK------G 143 (361)
T ss_pred Ch-----hhHHHHHHhhCcEEEEEEecCCC-Cc-CCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhh------h
Confidence 43 34666666788899998743221 12 257788888887774 789999999887554433222 1
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC
Q 010547 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 332 (507)
Q Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~ 332 (507)
...++..+|...|..++.+.+.+++++ +.++|+.|+++. .+++.++.++ ..+++++||||+.++.+.+.
T Consensus 144 ~~~~~~~~P~~aE~~av~r~~~la~~~-------~~~~hi~Hvs~~-~~~~~i~~~k---~~vt~ev~ph~L~l~~~~~~ 212 (361)
T cd01318 144 ESAHPRIRDAEAAAVATARALKLARRH-------GARLHICHVSTP-EELKLIKKAK---PGVTVEVTPHHLFLDVEDYD 212 (361)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHHHHHH-------CCCEEEEeCCCH-HHHHHHHHhC---CCeEEEeCHHHhhcCHHHHh
Confidence 125567899999999999999999976 899999999998 8999998876 57899999999999998887
Q ss_pred CCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCH
Q 010547 333 DGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTL 412 (507)
Q Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~ 412 (507)
..+..++++||+|...+++.+++++++|.+++++||+.|+....+. .+|+.++.|+.+++..++.++....+.++++
T Consensus 213 ~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~---~~~~~a~~G~~g~e~~l~~~~~~v~~~~l~l 289 (361)
T cd01318 213 RLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKR---KGYPAAPSGIPGVETALPLMLTLVNKGILSL 289 (361)
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHcc---CChhhCCCCCccHHHHHHHHHHHHHcCCCCH
Confidence 7788999999999999999999999999999999999999877654 3688999999999999888887777778999
Q ss_pred HHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECC
Q 010547 413 EQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRG 486 (507)
Q Consensus 413 ~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G 486 (507)
+++++++|.|||+++|++++|+|++|+.|||+++|++..|.++.. .+.++.. ++||.|..+.|+|..||++|
T Consensus 290 ~~a~~~~t~nPA~~lgl~~~G~i~~G~~ADlvv~d~~~~~~v~~~-~~~s~~~-~tp~~G~~l~G~v~~t~~~G 361 (361)
T cd01318 290 SRVVRLTSHNPARIFGIKNKGRIAEGYDADLTVVDLKEERTIRAE-EFHSKAG-WTPFEGFEVTGFPVMTIVRG 361 (361)
T ss_pred HHHHHHHhHHHHHHhCCCCCCccCCCCcCCEEEEeCCCCEEECHH-HccccCC-CCCCCCCEEeeEEEEEEeCc
Confidence 999999999999999996589999999999999999999999877 7778888 99999999999999999998
No 26
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=4.7e-45 Score=359.69 Aligned_cols=373 Identities=28% Similarity=0.340 Sum_probs=302.2
Q ss_pred eeeEEEeCCEEEEeecCCCCCCCCCCCcEEec-CCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCC
Q 010547 60 SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDY-GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 138 (507)
Q Consensus 60 ~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~-~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~ 138 (507)
+..|.|++|+|..|++.. + .++++||+ +|++|+|||||+|+|+..++....+++.+..++++.+||||++++|
T Consensus 13 ~~~~~~~~~~~~~i~~~~--~---~~~~~id~~~G~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~~mP- 86 (392)
T PRK00369 13 KEIKEICINFDRRIKEIK--S---RCKPDLDLPQGTLILPGAIDLHVHLRGLKLSYKEDVASGTSEAAYGGVTLVADMP- 86 (392)
T ss_pred CceEEEeeeeeeeEeecc--C---CCCceeecCCCCEEeCCEEEcccccCCCCCcccccHHHHHHHHHhCCcEEEEECC-
Confidence 567788999998888752 2 26889999 6999999999999999998888899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHH
Q 010547 139 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLS 218 (507)
Q Consensus 139 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 218 (507)
++.|.....+.+....+.++....+++.++++.... .+++ ...|+.+++.|.. + ... ...++
T Consensus 87 nt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~~~~~~----~~el---~~~~~~g~k~f~~-----~--~~~----~~~~~ 148 (392)
T PRK00369 87 NTIPPLNTPEAITEKLAELEYYSRVDYFVYSGVTKD----PEKV---DKLPIAGYKIFPE-----D--LER----EETFR 148 (392)
T ss_pred CCCCCCChHHHHHHHHHHhCcCCeEEEEEEeeccCC----HHHH---HHhhCceEEEECC-----C--Cch----HHHHH
Confidence 888988999999999998888889999988755321 2233 3447778888731 1 112 22344
Q ss_pred HHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh
Q 010547 219 VLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA 298 (507)
Q Consensus 219 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~ 298 (507)
.+.+++.++.+|+|+...+... ....+|...|..++.....+ .++|+.|+++.
T Consensus 149 ~~~~~~~~v~~HaE~~~l~~~~---------------~~~~rp~~aE~~ai~~~~~~------------~~lhi~HvSt~ 201 (392)
T PRK00369 149 VLLKSRKLKILHPEVPLALKSN---------------RKLRRNCWYEIAALYYVKDY------------QNVHITHASNP 201 (392)
T ss_pred HHHHhCCEEEEeCCCHHHhhcc---------------hhcccCHHHHHHHHHHHHHh------------CCEEEEECCCH
Confidence 4455569999999987664311 11236666676666555554 34999999997
Q ss_pred hHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhc
Q 010547 299 SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKL 378 (507)
Q Consensus 299 ~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~ 378 (507)
+.+ +.++++| +++++||||+.++.+ .+..++++||+|...+++.+++++.+ +++++|||+|+...++.
T Consensus 202 -~~v---~~ak~~g--vt~Ev~pHhL~l~~~----~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~~K~ 269 (392)
T PRK00369 202 -RTV---RLAKELG--FTVDITPHHLLVNGE----KDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKL 269 (392)
T ss_pred -HHH---HHHHHCC--CeEEechhHheeccC----CCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHHHcc
Confidence 654 4456666 678999999999875 36679999999999999999999998 88999999999877763
Q ss_pred cccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCC
Q 010547 379 LDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDH 458 (507)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~ 458 (507)
.+|+.++.|+.|++..++.++....+.+++++++++++|.|||++||++ .|.|++|+.|||+++|++ .|.. .
T Consensus 270 ---~~f~~~~~Gi~GlE~~lpll~~~v~~~~lsl~~~v~~~s~nPA~ilgl~-~g~i~~G~~ADlvi~d~~-~~~~--~- 341 (392)
T PRK00369 270 ---QPYEVCPPGIAALSFTPPFIYTLVSKGILSIDRAVELISTNPARILGIP-YGEIKEGYRANFTVIQFE-DWRY--S- 341 (392)
T ss_pred ---CCHhhCCCCCeeHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCC-CCccCCCCccCEEEEeCC-ceeE--c-
Confidence 3699999999999999999998777778999999999999999999995 488999999999999987 5554 3
Q ss_pred CcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc-CCCCCccc
Q 010547 459 PVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA-PAACGSPI 504 (507)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~-~~~~~~~~ 504 (507)
...++.. ++||.|..+.|.|..||++|++||++|++. ....|++=
T Consensus 342 ~~~sk~~-~sp~~G~~l~G~v~~ti~~G~~v~~~~~~~~~~g~G~~~ 387 (392)
T PRK00369 342 TKYSKVI-ETPLDGFELKASVYATIVQGKLAYLEGEVFPVKGINPFG 387 (392)
T ss_pred cccccCC-CCCCCCCEeeeEEEEEEECCEEEEECCeEecCCCCCCCC
Confidence 5577888 999999999999999999999999999987 45566653
No 27
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=3.3e-44 Score=356.47 Aligned_cols=371 Identities=35% Similarity=0.502 Sum_probs=321.4
Q ss_pred CcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeE
Q 010547 86 GQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165 (507)
Q Consensus 86 ~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 165 (507)
.++||++|++|+||+||+|+|+..+.....+++.+..+.++.+||||+++++ ++.|.....+.+....+.+.....+++
T Consensus 2 ~~~iD~~g~~vlPG~iD~HvH~~~~~~~~~e~~~s~s~aA~~GGvTtii~~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd01317 2 AEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMP-NTNPVIDNPAVVELLKNRAKDVGIVRV 80 (374)
T ss_pred CeEEECCCCEEecCEEeeccccCCCCccccchHHHHHHHHHhCCCcEEEECC-CCCCCCCCHHHHHHHHHHhccCCceeE
Confidence 5789999999999999999999988777788999999999999999999999 778888889999888888877777777
Q ss_pred EEeccccCCCcc-cHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcc
Q 010547 166 GFWGGLVPENAY-NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244 (507)
Q Consensus 166 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 244 (507)
..++++...... ..+++.++.+.|+.+++.+ +.+..+...+.++++.+++.|.++.+|+|+.......++
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~l~~~G~~~~k~~-------~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~~~~-- 151 (374)
T cd01317 81 LPIGALTKGLKGEELTEIGELLEAGAVGFSDD-------GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGGGVM-- 151 (374)
T ss_pred EEEEEEeeCCCcccHHHHHHHHHCCcEEEEcC-------CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhccCc--
Confidence 777666544333 3778888888999999852 234568889999999999999999999998877554333
Q ss_pred cCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccc
Q 010547 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL 324 (507)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~ 324 (507)
..+......++..+|...+...+.+.++++++. +.++|+.|+++. ..++.++.+++.|+.+.+++|+|++
T Consensus 152 --~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~-------~~~i~i~h~ss~-~~l~~i~~~~~~G~~~~~e~~~h~L 221 (374)
T cd01317 152 --NEGKVASRLGLPGIPPEAETIMVARDLELAEAT-------GARVHFQHLSTA-RSLELIRKAKAKGLPVTAEVTPHHL 221 (374)
T ss_pred --cCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHh-------CCcEEEEeCCCH-HHHHHHHHHHHCCCCEEEEecHHHH
Confidence 233334455667789988988999999999987 899999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH
Q 010547 325 AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY 404 (507)
Q Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 404 (507)
.++.+.+...++.++.+||+|...+++.+++++.+|+++++|||+++++...+.. +|+..+.|+.+++..++.++..
T Consensus 222 ~ld~~~~~~~~~~~k~~Pplr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~---~~~~~~~Gi~g~e~~l~~~~~~ 298 (374)
T cd01317 222 LLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETALPLLWTL 298 (374)
T ss_pred hcCHHHHhccCCceEEcCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhhCCCcHhHHHHHHHHHHHH
Confidence 9999998777888999999999999999999999999999999999988766543 5888999999999999999987
Q ss_pred HHhc-CCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEE
Q 010547 405 GRKY-GVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLAT 482 (507)
Q Consensus 405 ~~~~-gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 482 (507)
..+. .++++++++++|.|||+++|++ .|+|++|++|||+++|.+.+|.+... .+.++.. ++||.|..+.|.|..|
T Consensus 299 ~~~~~~~~~~~~~~~~t~npA~~lgl~-~G~l~~G~~ADlvi~d~~~~~~~~~~-~~~s~~~-~sp~~G~~l~g~~~~t 374 (374)
T cd01317 299 LVKGGLLTLPDLIRALSTNPAKILGLP-PGRLEVGAPADLVLFDPDAEWIVDEE-TFRSKSK-NTPFDGQKLKGRVLAT 374 (374)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHhCCC-CCcccCCCcCCEEEECCCCCEEEChh-hccccCC-CCCCCCCEEeEEEEEC
Confidence 6554 5899999999999999999995 49999999999999999999999888 7888888 9999999999998764
No 28
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=1.8e-43 Score=345.29 Aligned_cols=336 Identities=36% Similarity=0.601 Sum_probs=296.5
Q ss_pred CEEecceeecccccCCCCCC-CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc
Q 010547 94 AVIMPGLIDVHAHLDDPGRT-EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV 172 (507)
Q Consensus 94 ~~v~PGfID~H~H~~~~~~~-~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (507)
++|+||+||+|+|+..++.. ..+++.+..+.++.+||||++++| ++.|.....+.+....+.+....++++.++++..
T Consensus 1 ~~vlPG~iD~HvH~r~pg~~~~~e~~~t~t~aA~~GG~Ttv~~mp-n~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~ 79 (337)
T cd01302 1 LLVLPGFIDIHVHLRDPGGTTYKEDFESGSRAAAAGGVTTVIDMP-NTGPPPIDLPAIELKIKLAEESSYVDFSFHAGIG 79 (337)
T ss_pred CEecCCeeEeeeccCCCCCCCchhHHHHHHHHHHhCCCcEEEECC-CCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEecc
Confidence 47999999999999987766 788999999999999999999999 8888888899998888888888889998887665
Q ss_pred CCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccc
Q 010547 173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 252 (507)
.. ...+++.++.+.|+.++|.|+.+... ..+..+++.+.+.++.+++.+.++.+|++
T Consensus 80 ~~--~~~~el~~l~~~Gv~g~K~f~~~~~~-~~~~~~~~~l~~~~~~~~~~g~~v~~H~E-------------------- 136 (337)
T cd01302 80 PG--DVTDELKKLFDAGINSLKVFMNYYFG-ELFDVDDGTLMRTFLEIASRGGPVMVHAE-------------------- 136 (337)
T ss_pred Cc--cCHHHHHHHHHcCCcEEEEEEeccCC-CccccCHHHHHHHHHHHHhcCCeEEEeHH--------------------
Confidence 53 25677888888999999998754321 12356888999999999999999999993
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC
Q 010547 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 332 (507)
Q Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~ 332 (507)
+.+.++++. |.++|+.|+++. .+++.++.++++|+.+++++|||++.++.+.+.
T Consensus 137 ------------------r~~~la~~~-------g~~l~i~Hiss~-~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~ 190 (337)
T cd01302 137 ------------------RAAQLAEEA-------GANVHIAHVSSG-EALELIKFAKNKGVKVTCEVCPHHLFLDESMLR 190 (337)
T ss_pred ------------------HHHHHHHHh-------CCcEEEEeCCCH-HHHHHHHHHHHCCCcEEEEcChhhheeCHHHhh
Confidence 556666654 889999999998 999999999999999999999999999998887
Q ss_pred CCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCH
Q 010547 333 DGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTL 412 (507)
Q Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~ 412 (507)
..+..++.+||+|...+++.+++++.+|.+++++||+.|+....+... ++|+.++.|+.+++..++.++....+.++++
T Consensus 191 ~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~-~~~~~a~~G~~g~e~~l~~~~~~~~~~~i~~ 269 (337)
T cd01302 191 LNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPGLETRLPILLTEGVKRGLSL 269 (337)
T ss_pred CCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccC-CCcccCCCCcccHHHHHHHHHHHHHhcCCCH
Confidence 788899999999999999999999999999999999999987665432 3688999999999999999998888889999
Q ss_pred HHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEE
Q 010547 413 EQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLAT 482 (507)
Q Consensus 413 ~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 482 (507)
+++++++|.|||+++|+++.|+|++|+.|||+++|++..|.+... .+.++.. ++||.|..+.|.|..|
T Consensus 270 ~~~~~~~s~~pA~~~gl~~~g~i~~G~~ADlvi~d~~~~~~v~~~-~~~s~~~-~sp~~G~~l~G~v~~t 337 (337)
T cd01302 270 ETLVEILSENPARIFGLYPKGTIAVGYDADLVIVDPKKEWKVTAE-EIESKAD-WTPFEGMEVTGKPVST 337 (337)
T ss_pred HHHHHHHHHHHHHHcCCCCCCccccCCcCCEEEEeCCCcEEEcHH-HhcccCC-CCCcCCcEEEEEEEEC
Confidence 999999999999999995579999999999999999999999888 7888888 9999999999998764
No 29
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=9.2e-42 Score=348.94 Aligned_cols=393 Identities=21% Similarity=0.229 Sum_probs=285.7
Q ss_pred cceEEEEecEEECCCCc--eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChh
Q 010547 42 YNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~--~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~ 119 (507)
..+++|+|++|+|+++. ..++|.|+||+|++|++... .+.++||++|++|+|||||+|+|.....
T Consensus 18 ~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~~-----~~~~viD~~g~~v~PG~ID~H~H~~~~~-------- 84 (509)
T PRK09061 18 PYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAAI-----EGDRTIDATGLVVAPGFIDLHAHGQSVA-------- 84 (509)
T ss_pred cCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCCC-----CCCeEEeCCCCEEecCeEeeeeCCCCCc--------
Confidence 45789999999998764 35799999999999987532 2568999999999999999999976432
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHH-hcCceeeEEEecccc-------CC-----------------
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA-EKRIYVDVGFWGGLV-------PE----------------- 174 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~----------------- 174 (507)
..+.++.+||||++++..+..|. ....+.. .....+++..+.+.. ..
T Consensus 85 -~~~~~~~~GvTtvv~~~~~~~p~-------~~~~~~~~~~~~~vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~ 156 (509)
T PRK09061 85 -AYRMQAFDGVTTALELEAGVLPV-------ARWYAEQAGEGRPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDP 156 (509)
T ss_pred -cchhhccCCceeEEeeccCCCCH-------HHHHHHHHhcCCcceeehhcCcHHHHHHHhCCccccccccccccccccc
Confidence 24566889999999873122221 2222222 233346776655442 10
Q ss_pred --C-----cccHHHHHH----HHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhc
Q 010547 175 --N-----AYNASALEA----LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKL 243 (507)
Q Consensus 175 --~-----~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 243 (507)
. ++..+++.+ .++.|+.+++.+. .+.|..+.+++.++++.|++++.++..|+++....
T Consensus 157 ~~~~~~~t~~el~~m~~ll~~al~~Ga~gis~~~-----~y~p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~------ 225 (509)
T PRK09061 157 RWQERAATPAELAEILELLEQGLDEGALGIGIGA-----GYAPGTGHKEYLELARLAARAGVPTYTHVRYLSNV------ 225 (509)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHCCCCEEecCC-----ccCCCCCHHHHHHHHHHHHHcCCEEEEEecCcccC------
Confidence 1 122233333 3458999998743 22345689999999999999999999999765420
Q ss_pred ccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC------hhHHHHHHHHHHhCCCCEEE
Q 010547 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD------ASSSLDLLMEAKTNGDSITV 317 (507)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~------~~~~~~~i~~~~~~g~~i~~ 317 (507)
....+..++.+.++++++. |.++|+.|+++ . ..++.++.+++.|+.+++
T Consensus 226 -----------------~~~~e~~av~~~i~lA~~~-------G~rv~IsHlss~g~~~~~-~~le~I~~Ar~~Gi~Vt~ 280 (509)
T PRK09061 226 -----------------DPRSSVDAYQELIAAAAET-------GAHMHICHVNSTSLRDID-RCLALVEKAQAQGLDVTT 280 (509)
T ss_pred -----------------CchhHHHHHHHHHHHHHHh-------CCCEEEEeeccCCcccHH-HHHHHHHHHHHcCCcEEE
Confidence 1224667889999999976 88999999987 5 789999999999999999
Q ss_pred eccccc--------ccccccCCCCCCCce---eE---cCCCCC-------------------------hhhHHHHHHHHh
Q 010547 318 ETCPHY--------LAFSAEEIPDGDTRF---KC---APPIRD-------------------------AANKEKLWEALM 358 (507)
Q Consensus 318 ~~~~~~--------~~~~~~~~~~~~~~~---~~---~p~~~~-------------------------~~~~~~~~~~l~ 358 (507)
++|||+ +.++.+.+...+..+ +. .|++|+ ..+.+.+++.+.
T Consensus 281 e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 360 (509)
T PRK09061 281 EAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVL 360 (509)
T ss_pred EecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhC
Confidence 999999 655444343334443 55 788877 444677888888
Q ss_pred cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhh------hHHHHHHHHH-Hhc-CCCHHHHHHHHhhchhHHhC--
Q 010547 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ------FVLPVTWSYG-RKY-GVTLEQLASWWSERPAKLAG-- 428 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~~~~-~~~-gls~~~al~~~T~n~A~~lg-- 428 (507)
++.. +++||+.|+....+.. .|...+.+..+.+ ..++..+... ++. .+|++++++++|.+||++||
T Consensus 361 ~p~~-~i~sD~~p~~~~~~~~---~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~ 436 (509)
T PRK09061 361 FPGA-AIASDAMPWTWSDGTV---YEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDS 436 (509)
T ss_pred CCCc-eEecCCcccccccccc---ccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccc
Confidence 8877 9999999887665532 4555566665444 4455555543 343 59999999999999999999
Q ss_pred ---CCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcc-cCCCCCccc
Q 010547 429 ---QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNH-APAACGSPI 504 (507)
Q Consensus 429 ---l~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~-~~~~~~~~~ 504 (507)
++++|+|++|+.|||+++|++...+.. . +.++ +.++. .|..||++|+++|++|++ ++..+||+|
T Consensus 437 ~~~l~~~G~i~~G~~ADlvv~D~~~~~~~~---~--~~~~-~~~~~------gi~~v~v~G~~v~~~g~~~~~~~~G~~l 504 (509)
T PRK09061 437 VPAMRRKGRLQAGADADIVVFDPETITDRA---T--FEDP-NRPSE------GVRHVLVNGVPVVSNGELVRDARPGRPV 504 (509)
T ss_pred cccccCCEeeCCCCCcCEEEEchhhccccc---c--cccc-CCCCC------CceEEEECCEEEEECCEecCCCCCCeEe
Confidence 855799999999999999988633221 1 1222 33333 389999999999999998 588999999
Q ss_pred ccC
Q 010547 505 LAT 507 (507)
Q Consensus 505 ~~~ 507 (507)
|.+
T Consensus 505 r~~ 507 (509)
T PRK09061 505 RRP 507 (509)
T ss_pred cCC
Confidence 864
No 30
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=1.5e-41 Score=341.84 Aligned_cols=359 Identities=23% Similarity=0.315 Sum_probs=264.6
Q ss_pred eEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 44 QYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
+++|+|++|+++++ ...++|.|+||+|++|++.... .+.++||++|++|+|||||+|+|+..+... ...
T Consensus 1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~~----~~~~~iD~~G~~v~PG~iD~H~H~~~~~~~-----~~~ 71 (415)
T cd01297 1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILST----SAREVIDAAGLVVAPGFIDVHTHYDGQVFW-----DPD 71 (415)
T ss_pred CEEEECCEEECCCCCccccceEEEECCEEEEEecCCCC----CCCeEEECCCCEEccCEeeeeecCCccccc-----Ccc
Confidence 46899999999876 4578999999999999875431 256899999999999999999999875432 233
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCH------------------------HHHHHHHHHHhcC-ceeeEE---EeccccC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTIST------------------------ETLKLKVDAAEKR-IYVDVG---FWGGLVP 173 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~------------------------~~~~~~~~~~~~~-~~~~~~---~~~~~~~ 173 (507)
.+.++++||||++++++++.|..... +.+....+.+... ..+++. +++.+..
T Consensus 72 ~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~ 151 (415)
T cd01297 72 LRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPAVNVAALVGHAALRR 151 (415)
T ss_pred hhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCCcCeeeccCcHHHHH
Confidence 67789999999999875444543332 4455666666444 477877 5544432
Q ss_pred ---------CCcccHHHHHHH----HHcCCcEEEEcccCCCCCCCC--CCCHHHHHHHHHHHHhcCCcEEEecCCcccch
Q 010547 174 ---------ENAYNASALEAL----LNAGVLGLKSFMCPSGINDFP--MTNASHIKEGLSVLARYKRPLLVHAEMEKGSE 238 (507)
Q Consensus 174 ---------~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 238 (507)
..+...+++.++ ++.|+.+++.++.+ .+ ..+++++.++++.+++++.++.+|+++...
T Consensus 152 ~~~g~~~~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y-----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~-- 224 (415)
T cd01297 152 AVMGLDAREATEEELAKMRELLREALEAGALGISTGLAY-----APRLYAGTAELVALARVAARYGGVYQTHVRYEGD-- 224 (415)
T ss_pred HHhCcCCCCCCHHHHHHHHHHHHHHHHCCCeEEEccccc-----CCcccCCHHHHHHHHHHHHHcCCEEEEEECcccc--
Confidence 112233444444 57899999976533 23 578999999999999999999999976532
Q ss_pred hhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHH---------HHHHHHHH
Q 010547 239 RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---------LDLLMEAK 309 (507)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~---------~~~i~~~~ 309 (507)
.+..++.+.++++++. +.++|+.|+++. .. ++.+++++
T Consensus 225 -------------------------~e~~av~~~~~~a~~~-------g~r~~i~H~ss~-~~~~~~~~~~~l~~i~~a~ 271 (415)
T cd01297 225 -------------------------SILEALDELLRLGRET-------GRPVHISHLKSA-GAPNWGKIDRLLALIEAAR 271 (415)
T ss_pred -------------------------cHHHHHHHHHHHHHHh-------CCCEEEEEEecC-CCcccchHHHHHHHHHHHH
Confidence 4677889999999876 889999999986 66 89999999
Q ss_pred hCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCC
Q 010547 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWG 389 (507)
Q Consensus 310 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 389 (507)
..|+.+++++||+++.+ ...+.++++. .+++++||+.+.. .. +....
T Consensus 272 ~~G~~v~~e~~p~~~~~-----------------------~~~~~~l~~~-~~~~i~SDh~~~~-~~-------~~~~~- 318 (415)
T cd01297 272 AEGLQVTADVYPYGAGS-----------------------EDDVRRIMAH-PVVMGGSDGGALG-KP-------HPRSY- 318 (415)
T ss_pred HhCCcEEEEeCCCCCCc-----------------------HHHHHHHHcC-CCceeeeCCCcCC-CC-------Ccchh-
Confidence 99999999999976554 2233444544 8899999998864 10 11111
Q ss_pred CCchhhhHHHHHHHH-HHhc-CCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCC
Q 010547 390 GISSLQFVLPVTWSY-GRKY-GVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSI 467 (507)
Q Consensus 390 ~~~~~~~~l~~~~~~-~~~~-gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~ 467 (507)
.. ++.++.. ..+. .++++++++++|.|||++||++++|+|++|++||||++|++.....+. +
T Consensus 319 --~~----~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~G~l~~G~~ADlvv~d~~~~~~~~~----------~ 382 (415)
T cd01297 319 --GD----FTRVLGHYVRERKLLSLEEAVRKMTGLPARVFGLADRGRIAPGYRADIVVFDPDTLADRAT----------F 382 (415)
T ss_pred --CC----HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEEcccccccccc----------h
Confidence 11 3334433 3333 499999999999999999999657999999999999999886443321 1
Q ss_pred ccccCcEEeeEEEEEEECCEEEEecCcccCCCCCc
Q 010547 468 SAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 468 ~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
..+. .....|..|||+|++||++|++++..+|+
T Consensus 383 ~~~~--~~~~~v~~viv~G~~v~~~~~~~~~~~G~ 415 (415)
T cd01297 383 TRPN--QPAEGIEAVLVNGVPVVRDGAFTGARPGR 415 (415)
T ss_pred hhhc--cCCCCceEEEECCEEEEECCEECCCCCCC
Confidence 1111 11136999999999999999999988886
No 31
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=6.4e-39 Score=311.06 Aligned_cols=338 Identities=28% Similarity=0.462 Sum_probs=276.1
Q ss_pred CEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC
Q 010547 94 AVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP 173 (507)
Q Consensus 94 ~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (507)
.+|+||+||.|+|+..++...++++.+..++++++||||+.++| ++.|.....+.+....+.++....+++.++++...
T Consensus 2 ~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~dmP-nt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~~~~~ 80 (344)
T cd01316 2 TIRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMP-NTNPSIVDVASLKLVQSLAQAKARCDYAFSIGATS 80 (344)
T ss_pred eEEeCCeEEeeeccCCCCcCCcChHHHHHHHHHhCCCeEEEECC-CCCCCCCCHHHHHHHHHHhccCcEEeEEEEeeecC
Confidence 47999999999999998888899999999999999999999999 88888889999999999888888999998876655
Q ss_pred CCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcccc
Q 010547 174 ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253 (507)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~ 253 (507)
... +.+.++.. ...+++.|+.+.. .... .++.........+...+.++..|++.
T Consensus 81 ~~~---~~~~~l~~-~~~g~k~f~~~~~-~~~~-~~~~~~~~~~~~~~~~~~p~~~~~e~-------------------- 134 (344)
T cd01316 81 TNA---ATVGELAS-EAVGLKFYLNETF-STLI-LDKITAWASHFNAWPSTKPIVTHAKS-------------------- 134 (344)
T ss_pred CCH---HHHHHHHh-ccCeEEEEECCCC-CCCc-cchHHHHHHHHHhcccCCCeEEehhh--------------------
Confidence 443 23333332 2568888764311 1111 12222222223333446777777743
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC
Q 010547 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333 (507)
Q Consensus 254 ~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~ 333 (507)
..+.+.+.+++.+ |.++|+.|+++. ++++.++.+++.|+.+++++||||+.++.+++..
T Consensus 135 -------------~~~~~~l~la~~~-------g~~lhi~HiSt~-~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~ 193 (344)
T cd01316 135 -------------QTLAAVLLLASLH-------NRSIHICHVSSK-EEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR 193 (344)
T ss_pred -------------HHHHHHHHHHHHH-------CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc
Confidence 3456778888866 889999999999 9999999999999999999999999999988755
Q ss_pred CCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHH
Q 010547 334 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLE 413 (507)
Q Consensus 334 ~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~ 413 (507)
..++.+||+|...+++.+++++. .+++++|||+|+....+. +. .++.|+.|++..++.++..+.+.+++++
T Consensus 194 --~~~k~~PPLR~~~dr~aL~~~l~--~id~i~SDHaP~~~~~K~---~~--~a~~G~~g~e~~lpl~~~~v~~~~i~l~ 264 (344)
T cd01316 194 --GQYEVRPFLPTREDQEALWENLD--YIDCFATDHAPHTLAEKT---GN--KPPPGFPGVETSLPLLLTAVHEGRLTIE 264 (344)
T ss_pred --CCceeCCCCcCHHHHHHHHHHHh--cCCEEEcCCCCCCHHHhc---CC--CCCCCcccHHHHHHHHHHHHHcCCCCHH
Confidence 57899999999999999999995 488999999999876653 12 6678999999999999986666689999
Q ss_pred HHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecC
Q 010547 414 QLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEG 493 (507)
Q Consensus 414 ~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g 493 (507)
+++++.+.|||+.||++. + ++||+++|++..|.++.. .+.++.. ++||.|..+.|.|..|+++|++||++|
T Consensus 265 ~l~~~~s~nPAk~~gl~~------~-~~~lvi~d~~~~~~v~~~-~~~s~~~-~sp~~G~~l~G~v~~ti~rG~~v~~~g 335 (344)
T cd01316 265 DIVDRLHTNPKRIFNLPP------Q-SDTYVEVDLDEEWTIPKN-PLQSKKG-WTPFEGKKVKGKVQRVVLRGETAFIDG 335 (344)
T ss_pred HHHHHHHHhHHHHhCCCC------C-CCCEEEEeCCCcEEEChh-hccccCC-CCCCCCCEEeeEEEEEEECCEEEEECC
Confidence 999999999999999832 2 447999999999999877 7888888 999999999999999999999999999
Q ss_pred cccC
Q 010547 494 NHAP 497 (507)
Q Consensus 494 ~~~~ 497 (507)
++..
T Consensus 336 ~~~~ 339 (344)
T cd01316 336 EIVA 339 (344)
T ss_pred EEcc
Confidence 8864
No 32
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=2.1e-37 Score=306.63 Aligned_cols=360 Identities=24% Similarity=0.323 Sum_probs=251.1
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCC----CC-CCCC--
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD----PG-RTEW-- 115 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~----~~-~~~~-- 115 (507)
++++|+|++|+++++..+++|.|+||||++|++... + ..++||++|++|+|||||+|+|... +. ...|
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~-~----~~~~iDa~g~~v~PG~ID~H~h~~~~~~~p~~~~~~~~ 76 (383)
T PRK15446 2 MEMILSNARLVLPDEVVDGSLLIEDGRIAAIDPGAS-A----LPGAIDAEGDYLLPGLVDLHTDNLEKHLAPRPGVDWPA 76 (383)
T ss_pred ccEEEECcEEEcCCCceeeeEEEECCEEEEecCCCC-C----CCceEeCCCCEEEeCeEEcccCCcccccCCCCCCccch
Confidence 568999999999888779999999999999997543 1 3578999999999999999996542 21 1122
Q ss_pred -CChhHHHHHHHhCCceEEEeCCCCC-CCC-CC-CH---HHHHHHHH--HHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 116 -EGFPSGTKAAAAGGITTLIDMPLNS-DPS-TI-ST---ETLKLKVD--AAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 116 -~~~~~~~~~~l~~GvTt~~~~~~~~-~p~-~~-~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
+++....++++++||||++++...+ .|. .. .. ..+....+ ....+..+++.+|+++....+...+++.++.
T Consensus 77 ~~~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~~ 156 (383)
T PRK15446 77 DAALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEALL 156 (383)
T ss_pred HHHHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHHh
Confidence 6788889999999999999974222 231 11 12 13334444 3446788999999999877777788999999
Q ss_pred HcCCcEEEEcccCC-CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 187 NAGVLGLKSFMCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 187 ~~g~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
+.|..++|.|+++. +....+ ..+.+.... +++.| .+|+|....+.... ..|...+
T Consensus 157 ~~g~~~~k~fm~~~p~~~~~~--~~~~~~~~~--~~~~g---~~~~e~~~~~~~~~-----------------~~~~~~~ 212 (383)
T PRK15446 157 AHPRVDLVSLMDHTPGQRQFR--DLEKYREYY--AGKYG---LSDEEFDAFVEERI-----------------ALSARYA 212 (383)
T ss_pred cCCCcCEEEEeCCCCcccccc--CHHHHHHHH--HhhcC---CCHHHHHHHHHHHH-----------------HhHhhcC
Confidence 99999999998775 322222 333444444 44666 67888766533211 1244556
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCcee-EcC-C
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK-CAP-P 343 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~ 343 (507)
.+.+....+.+++. |.++ ..|.... .+.++.+++.|+.+... +...... ......+.... ..| +
T Consensus 213 ~e~i~~~v~~A~~~-------g~~v-~sH~~~~---~~~i~~a~~~Gv~~~e~--~~~~e~~-~~~~~~g~~v~~~~p~~ 278 (383)
T PRK15446 213 PPNRRAIAALARAR-------GIPL-ASHDDDT---PEHVAEAHALGVAIAEF--PTTLEAA-RAARALGMSVLMGAPNV 278 (383)
T ss_pred HHHHHHHHHHHHHC-------CCce-eecCCCC---HHHHHHHHHcCCceeeC--CCcHHHH-HHHHHCCCEEEeCCccc
Confidence 77899999999976 7766 6776322 23577777888876531 1111000 01111222222 223 2
Q ss_pred CCC--hhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhh
Q 010547 344 IRD--AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSE 421 (507)
Q Consensus 344 ~~~--~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~ 421 (507)
+|. ......+++++.+|++++++||+.+... +...+......+++++++++++|.
T Consensus 279 ~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~~~-----------------------~~~~~~~~~~~gls~~~al~~~T~ 335 (383)
T PRK15446 279 VRGGSHSGNVSALDLAAAGLLDILSSDYYPASL-----------------------LDAAFRLADDGGLDLPQAVALVTA 335 (383)
T ss_pred ccCCcccchHhHHHHHHCCCcEEEEcCCChhhH-----------------------HHHHHHHHHhcCCCHHHHHHHHhH
Confidence 443 3456778899999999999999865421 223344456678999999999999
Q ss_pred chhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 422 RPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 422 n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
|||+++|+++.|+|++|+.|||+++|.++. .. .+..||++|++||+.
T Consensus 336 npA~~lgl~~~G~I~~G~~ADlvv~d~~~~------------~~------------~v~~v~~~G~~v~~~ 382 (383)
T PRK15446 336 NPARAAGLDDRGEIAPGKRADLVRVRRAGG------------LP------------VVRAVWRGGRRVFLA 382 (383)
T ss_pred HHHHHcCCCCCcCcCCCCcCCEEEEcCCCC------------Cc------------chheEEECCEEEEeC
Confidence 999999995569999999999999997620 01 578899999999864
No 33
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=100.00 E-value=2.3e-36 Score=298.23 Aligned_cols=355 Identities=25% Similarity=0.330 Sum_probs=254.8
Q ss_pred EEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCC------CCCCCC---C
Q 010547 46 WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD------PGRTEW---E 116 (507)
Q Consensus 46 ~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~------~~~~~~---~ 116 (507)
+|+|++|+++++...++|.|+||+|++|++... . ..++||++|++|+|||||+|+|... ++. .| +
T Consensus 1 ~i~~~~vv~~~~~~~~~i~i~dg~I~~i~~~~~-~----~~~~iD~~G~~v~PGlID~H~h~~e~~~~prp~~-~~~~~~ 74 (376)
T TIGR02318 1 VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPV-A----LAEAIDGEGDLLLPGLIDLHTDNLERHMSPRPGV-DWPIDA 74 (376)
T ss_pred CEeCeEEECCCceEeeeEEEECCEEEEecCCCC-C----CCceEeCCCCEEeccEEEcccCccccCcCCCCCC-CcchHH
Confidence 489999999998777899999999999987432 1 4568999999999999999999876 333 45 5
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCC--CCCCCCHHHHHHHH---HHHhcC--ceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNS--DPSTISTETLKLKV---DAAEKR--IYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~--~p~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
.+....+.++.+||||+++++..+ .|.....+.+.... +++..+ ..+++.+|+++....+...++++.+.+.|
T Consensus 75 ~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~~~g 154 (376)
T TIGR02318 75 AIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELIDDP 154 (376)
T ss_pred HHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHhcCC
Confidence 677888899999999999997433 45556677777766 555645 78899999999777777788999999999
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHH
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAI 269 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 269 (507)
..+++.|+++.+ ...+..+++.+.+.... +.| .+|+|....+.......+ ....+.+
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~~~~~~-----------------~~~~e~i 211 (376)
T TIGR02318 155 RVDLISLMDHTP-GQRQFRDLEKYREYYRG--KRG---LSDDEFDEIVEERIARRA-----------------EYGLANR 211 (376)
T ss_pred CcCEEEEeCCCC-CcccccCHHHHHHHHHh--hcC---CCHHHHHHHHHHHHHHHh-----------------hccHHHH
Confidence 999999998765 33456677666666543 555 678887665443222211 0125678
Q ss_pred HHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCc-eeEcC-CCCCh
Q 010547 270 RELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR-FKCAP-PIRDA 347 (507)
Q Consensus 270 ~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~~~~ 347 (507)
....+++++. |.++ ..|... ..+.++.+++.|+.+... +-.... ...+...+.. .+..| +++..
T Consensus 212 ~~~v~~A~~~-------G~~v-~sH~~~---~~e~i~~a~~~Gv~~~E~--~~t~e~-a~~~~~~G~~v~~~~p~~~r~~ 277 (376)
T TIGR02318 212 SEIAALARAR-------GIPL-ASHDDD---TPEHVAEAHDLGVTISEF--PTTLEA-AKEARSLGMQILMGAPNIVRGG 277 (376)
T ss_pred HHHHHHHHHC-------CCeE-EEecCC---CHHHHHHHHHCCCChhcc--CCCHHH-HHHHHHcCCeEEECCccccccc
Confidence 8888888876 7776 677642 234577777778744321 100000 1111222333 33344 34544
Q ss_pred hh--HHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchh
Q 010547 348 AN--KEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPA 424 (507)
Q Consensus 348 ~~--~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A 424 (507)
.. ...+++++.+|++++++||+.+... +...+.... ..+++++++++++|.|||
T Consensus 278 ~~~~~~~l~~~~~~G~~~~l~SD~~p~~~-----------------------l~~~~~~~~~~~gl~~~~al~~~T~npA 334 (376)
T TIGR02318 278 SHSGNLSARELAHEGLLDVLASDYVPASL-----------------------LLAAFQLADDVEGIPLPQAVKMVTKNPA 334 (376)
T ss_pred cccchHHHHHHHHCCCcEEEEcCCCcHHH-----------------------HHHHHHHHHhhcCCCHHHHHHHHhHHHH
Confidence 33 6778999999999999999975421 222333333 347999999999999999
Q ss_pred HHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEE
Q 010547 425 KLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVY 490 (507)
Q Consensus 425 ~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~ 490 (507)
+++|++++|+|++|++|||+++|.... .+ .|..||++|++||
T Consensus 335 ~~lgl~~~G~I~~G~~ADlvvvd~~~~------------~~------------~v~~v~~~G~~v~ 376 (376)
T TIGR02318 335 RAVGLSDRGSIAPGKRADLVRVHRVDG------------VP------------RIRAVWRAGRRVY 376 (376)
T ss_pred HHcCCCCCCcCCCCCcccEEEEcCCCC------------Cc------------cceEEEECCEEeC
Confidence 999997689999999999999996420 11 6889999999986
No 34
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=2.4e-35 Score=298.24 Aligned_cols=373 Identities=18% Similarity=0.202 Sum_probs=220.8
Q ss_pred EEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---C---
Q 010547 45 YWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---E--- 114 (507)
Q Consensus 45 ~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~--- 114 (507)
.+|+|++|+++++ +.+++|+|+||+|++||+..+... +...++||++|++|+|||||+|+|+...... .
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~-~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~~~ 80 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFL-EQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDDSN 80 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccc-cccCeEEeCCCCEEccceeeeccCCCccccccccCCCC
Confidence 5899999999876 347899999999999998654321 1246899999999999999999999765322 0
Q ss_pred -----------CCC------h----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC
Q 010547 115 -----------WEG------F----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP 173 (507)
Q Consensus 115 -----------~~~------~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (507)
.+. . ...+.+++++||||+.++. +..+ .......+.......+.............
T Consensus 81 ~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~-~~~~--~~~~~~~~a~~~~Gir~~~~~~~~~~~~~ 157 (419)
T PRK06687 81 LHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMY-NPNG--VDIQQIYQVVKTSKMRCYFSPTLFSSETE 157 (419)
T ss_pred HHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhh-cccc--ccHHHHHHHHHHhCCceEeccccccCCcc
Confidence 000 1 1234567999999999875 2211 12222222222222222111111111111
Q ss_pred CCcccHH----HHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCcC
Q 010547 174 ENAYNAS----ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTL 248 (507)
Q Consensus 174 ~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~ 248 (507)
......+ .++++...+...++..+.+ .....++++.++++.+.|++++.++.+|+.+... ........+
T Consensus 158 ~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~---~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~g--- 231 (419)
T PRK06687 158 TTAETISRTRSIIDEILKYKNPNFKVMVAP---HSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRYG--- 231 (419)
T ss_pred cHHHHHHHHHHHHHHHhccCCCceEEEEeC---CCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHC---
Confidence 1111122 2333333333335554443 3345789999999999999999999999865432 111000000
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
....+...+.+ ..+.+..+.|+... ..+.++.+++.|+.+.. ||..-
T Consensus 232 ---------------------~~~~~~l~~~g----~l~~~~~~~H~~~~--~~~~~~~la~~g~~v~~--~P~sn---- 278 (419)
T PRK06687 232 ---------------------KRPLAFLEELG----YLDHPSVFAHGVEL--NEREIERLASSQVAIAH--NPISN---- 278 (419)
T ss_pred ---------------------cCHHHHHHHcC----CCCCCeEEEEEecC--CHHHHHHHHHcCCeEEE--CcHHh----
Confidence 00111122211 11455677777763 34466777788876543 66311
Q ss_pred cCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH-HHHHHHHHH-
Q 010547 329 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYGR- 406 (507)
Q Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~- 406 (507)
.. ......++.++++.|+++++|||..+++...++ ++.. +........
T Consensus 279 --~~-------------l~~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 328 (419)
T PRK06687 279 --LK-------------LASGIAPIIQLQKAGVAVGIATDSVASNNNLDM---------------FEEGRTAALLQKMKS 328 (419)
T ss_pred --hh-------------hccCCCcHHHHHHCCCeEEEeCCCCCCCCChhH---------------HHHHHHHHHHhcccc
Confidence 00 001122456788899999999997543322111 1110 111111111
Q ss_pred --hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe---eEEE
Q 010547 407 --KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVL 480 (507)
Q Consensus 407 --~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~ 480 (507)
...++++++++++|.|||+++|+ +++|+|++||.|||+++|.+....+. + . .+|+..+... ..|.
T Consensus 329 ~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~---p-----~-~~~~~~lv~~~~~~~v~ 399 (419)
T PRK06687 329 GDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQ---P-----Q-ENMLSHLVYAVKSSDVD 399 (419)
T ss_pred CCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcC---C-----c-cCHHHHhheeCCCCCcc
Confidence 12489999999999999999999 56899999999999999976321111 1 1 3333333332 3699
Q ss_pred EEEECCEEEEecCcccCCC
Q 010547 481 ATISRGNLVYKEGNHAPAA 499 (507)
Q Consensus 481 ~v~v~G~~v~~~g~~~~~~ 499 (507)
.|||+|++|+++|+++..+
T Consensus 400 ~v~v~G~~v~~~g~~~~~d 418 (419)
T PRK06687 400 DVYIAGEQVVKQGQVLTVE 418 (419)
T ss_pred EEEECCEEEEECCeEecCC
Confidence 9999999999999998765
No 35
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=4.7e-35 Score=296.05 Aligned_cols=379 Identities=14% Similarity=0.141 Sum_probs=223.0
Q ss_pred eEEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC------
Q 010547 44 QYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------ 113 (507)
Q Consensus 44 ~~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~------ 113 (507)
+++|+|++|++.+. +.+++|+|+||+|++||+..... .++++++||++|++|+|||||+|+|+......
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~-~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~~~ 80 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS-DFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGDDM 80 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc-cCCCCeEEeCCCCEEccceeecccCccchhhhccCCCC
Confidence 57999999998764 35889999999999999853222 22367899999999999999999999643111
Q ss_pred ---CCC--C----------------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec-cc
Q 010547 114 ---EWE--G----------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-GL 171 (507)
Q Consensus 114 ---~~~--~----------------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 171 (507)
.|- . ....+.+++++||||+.|+. .. .....+.+.+..+....+..+....+. +.
T Consensus 81 ~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~-~~--~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~ 157 (435)
T PRK15493 81 LLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMF-NP--IGVDQDAIMETVSRSGMRAAVSRTLFSFGT 157 (435)
T ss_pred CHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccc-cc--cccCHHHHHHHHHHcCCcEEEeeeecCCCC
Confidence 110 0 01234567999999999874 21 111223333333322223222211111 00
Q ss_pred cCCCcccHHHHHHHHHc--C-CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCc
Q 010547 172 VPENAYNASALEALLNA--G-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDT 247 (507)
Q Consensus 172 ~~~~~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~ 247 (507)
........++...+.+. + ...++..+.+ .....++++.++++.+.|++++.++.+|+.+... +.......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~g-- 232 (435)
T PRK15493 158 KEDEKKAIEEAEKYVKRYYNESGMLTTMVAP---HSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEAQYG-- 232 (435)
T ss_pred CccHHHHHHHHHHHHHHhcCCCCCeEEEEeC---CCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhC--
Confidence 01111112222222221 1 1123333322 3334589999999999999999999999854322 100000000
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccc
Q 010547 248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS 327 (507)
Q Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~ 327 (507)
....+.+.+.+ ..+.+..+.|+..- +.+.++.+++.|+.+. +||..-..
T Consensus 233 ----------------------~~~~~~l~~~G----ll~~~~~~~H~~~l--~~~d~~~la~~g~~v~--~~P~sn~~- 281 (435)
T PRK15493 233 ----------------------KRPVEYAASCG----LFKRPTVIAHGVVL--NDNERAFLAEHDVRVA--HNPNSNLK- 281 (435)
T ss_pred ----------------------CCHHHHHHHcC----CCCCCcEEEEeecC--CHHHHHHHHHcCCeEE--EChHHHHH-
Confidence 00112222221 11455667777652 3345566677787654 46642100
Q ss_pred ccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-
Q 010547 328 AEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR- 406 (507)
Q Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 406 (507)
......++.++++.|+.+++|||+.+.+...++.. +..+..+.....
T Consensus 282 ------------------l~~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~--------------~~~~a~~~~~~~~ 329 (435)
T PRK15493 282 ------------------LGSGIANVKAMLEAGIKVGIATDSVASNNNLDMFE--------------EMRIATLLQKGIH 329 (435)
T ss_pred ------------------HhcCcccHHHHHHCCCeEEEccCccccCCCcCHHH--------------HHHHHHHHHhhcc
Confidence 01123355678899999999999754322111100 111111222111
Q ss_pred --hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe---eEEEE
Q 010547 407 --KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVLA 481 (507)
Q Consensus 407 --~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~ 481 (507)
...++++++++++|.|||+++|+++.|+|++||.|||+++|.+....+.+ . .+++..+... ..|..
T Consensus 330 ~~~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d~~~~~~~~p--------~-~d~~~~lv~~~~~~~V~~ 400 (435)
T PRK15493 330 QDATALPVETALTLATKGAAEVIGMKQTGSLEVGKCADFITIDPSNKPHLQP--------A-DEVLSHLVYAASGKDISD 400 (435)
T ss_pred CCCCcCCHHHHHHHHhHHHHHHcCCCCCCccCCCCcCCEEEEcCCCCCCcCC--------c-cChHHhEEEeCCCCCccE
Confidence 23689999999999999999999668999999999999999754222211 1 3344444443 35999
Q ss_pred EEECCEEEEecCcccCCCCCcc
Q 010547 482 TISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 482 v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
|||+||+|++||+++..+..+.
T Consensus 401 v~V~G~~v~~~g~~~~~d~~~~ 422 (435)
T PRK15493 401 VIINGKRVVWNGECKTLDEERI 422 (435)
T ss_pred EEECCEEEEECCeECCCCHHHH
Confidence 9999999999999998776553
No 36
>PRK13985 ureB urease subunit beta; Provisional
Probab=100.00 E-value=1.1e-33 Score=279.88 Aligned_cols=351 Identities=21% Similarity=0.276 Sum_probs=226.8
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCC---------CCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN---------SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~---------~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..+++|+|++|++..++.+++|.|+||||++|++...+... ..+.++||++|++|+|||||+|+|+..+..
T Consensus 64 ~~DlVI~Na~IiD~~gi~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~~~P~~ 143 (568)
T PRK13985 64 ELDLIITNALIIDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQ 143 (568)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCCCCccH
Confidence 56899999999998777889999999999999985432100 126789999999999999999999865432
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCC----CCCCCCCC--HHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPL----NSDPSTIS--TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~----~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
...++++||||+++++. ++.|.... ...+....+.++.. .+++.+++.. .....+++.++.
T Consensus 144 ---------~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~~-pvn~gf~gkG---~~~~l~eL~el~ 210 (568)
T PRK13985 144 ---------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEY-SMNLGFLGKG---NSSNDASLADQI 210 (568)
T ss_pred ---------HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhcc-CccEEEecCC---ccCCHHHHHHHH
Confidence 24689999999999521 33333323 22345555555533 4777766532 223467888889
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
+.|+.+++.+. .+..++..+.++++.|++++.++.+|++.... .
T Consensus 211 ~aGA~GfK~~e-------d~g~t~~~I~~aL~vA~~~dv~V~iHtdtlne-----------------------------~ 254 (568)
T PRK13985 211 EAGAIGFKIHE-------DWGTTPSAINHALDVADKYDVQVAIHTDTLNE-----------------------------A 254 (568)
T ss_pred HcCCEEEEECC-------ccCCCHHHHHHHHHHHHHcCCEEEEeCCCCCC-----------------------------c
Confidence 99999999742 23578899999999999999999999976542 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCC
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 344 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 344 (507)
..++..+..+. |..+|..|...+. ...+.++.+...++..+ .+.| ...++.+.+...-...+.+..+
T Consensus 255 g~~E~t~aa~~---------gr~iH~~H~egaggghapdi~~~~~~~nvlp~-stnp-t~p~t~nt~~e~~dm~m~~h~l 323 (568)
T PRK13985 255 GCVEDTMAAIA---------GRTMHTFHTEGAGGGHAPDIIKVAGEHNILPA-STNP-TIPFTVNTEAEHMDMLMVCHHL 323 (568)
T ss_pred hhhHHHHHHhc---------CCeEEEEeccCCCccchhhHHHHcCCCCcccC-CCCC-CCCCccCchhhhcCeEEeecCC
Confidence 12334444444 8889999998641 23444444433333211 1122 2333334443332233333222
Q ss_pred CC--hhhH---------HHH--HH-HHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh---
Q 010547 345 RD--AANK---------EKL--WE-ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK--- 407 (507)
Q Consensus 345 ~~--~~~~---------~~~--~~-~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 407 (507)
.. +++. +.+ -. +-..|+...+.||..+-- .++-+-.++-+...+..+
T Consensus 324 ~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mg----------------r~ge~~~r~~q~a~k~~~~~g 387 (568)
T PRK13985 324 DKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMG----------------RVGEVITRTWQTADKNKKEFG 387 (568)
T ss_pred CCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhC----------------cccceeeehHHHHHHHHHhcC
Confidence 10 1111 111 01 223489999999965211 111111111111111111
Q ss_pred ---------cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee
Q 010547 408 ---------YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG 477 (507)
Q Consensus 408 ---------~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (507)
-.+++++++++.|.|||+++|+ +++|+|++||.||||+||.+... .
T Consensus 388 ~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~----------~-------------- 443 (568)
T PRK13985 388 RLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG----------V-------------- 443 (568)
T ss_pred CCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCC----------C--------------
Confidence 2377889999999999999999 78999999999999999966311 0
Q ss_pred EEEEEEECCEEEEec
Q 010547 478 KVLATISRGNLVYKE 492 (507)
Q Consensus 478 ~V~~v~v~G~~v~~~ 492 (507)
.+..||++|+++|..
T Consensus 444 ~pe~vi~~G~iv~~~ 458 (568)
T PRK13985 444 KPNMIIKGGFIALSQ 458 (568)
T ss_pred ChheEEECCEEEEcc
Confidence 367999999999976
No 37
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1e-34 Score=296.15 Aligned_cols=377 Identities=18% Similarity=0.184 Sum_probs=219.6
Q ss_pred ceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---CC-
Q 010547 43 NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EW- 115 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~~- 115 (507)
++++|+|++|+++++ +.+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...... ..
T Consensus 1 ~~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~~---~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~~ 77 (445)
T PRK07228 1 MTILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDLE---DYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADDL 77 (445)
T ss_pred CeEEEEccEEEecCCCcEecccEEEEECCEEEEecCCcccC---cCCeEEeCCCCEEecCEEecccCCccccceeccCCC
Confidence 358999999999874 56899999999999999865432 157899999999999999999999753211 00
Q ss_pred C-------------------C----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe-ccc
Q 010547 116 E-------------------G----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW-GGL 171 (507)
Q Consensus 116 ~-------------------~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 171 (507)
. . ......+++++||||++++. +.. .....++...+ ...+........ .+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~-~~~---~~~~~~~a~~~-~g~r~~~~~~~~~~~~ 152 (445)
T PRK07228 78 ELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDME-SVH---HTDSAFEAAGE-SGIRAVLGKVMMDYGD 152 (445)
T ss_pred CHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccc-ccc---ChHHHHHHHHH-cCCeEEEecceecCCc
Confidence 0 0 01223456799999999985 111 11122211111 111111111110 000
Q ss_pred -cCC-----CcccHHHHHHHHHc--CCc--EEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhh
Q 010547 172 -VPE-----NAYNASALEALLNA--GVL--GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERH 240 (507)
Q Consensus 172 -~~~-----~~~~~~~~~~~~~~--g~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~ 240 (507)
.+. ..+..+...++.+. |.. .+...+.+ .....++++.++++++.|++++.++.+|+.+... ....
T Consensus 153 ~~p~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~ 229 (445)
T PRK07228 153 DVPEGLQEDTEASLAESVRLLEKWHGADNGRIRYAFTP---RFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETV 229 (445)
T ss_pred CCCccccccHHHHHHHHHHHHHHhcCCCCCceEEEEeC---CCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHH
Confidence 000 01112222233221 322 22211111 2234578999999999999999999999943221 1100
Q ss_pred hhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecc
Q 010547 241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETC 320 (507)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~ 320 (507)
....+ ...++...+.+ ..+.++.+.|+... ..+.++.+++.|+.+. +|
T Consensus 230 ~~~~g------------------------~~~~~~l~~~g----~~~~~~~l~H~~~~--~~~~~~~~~~~g~~v~--~~ 277 (445)
T PRK07228 230 EEETG------------------------MRNIHYLDEVG----LTGEDLILAHCVWL--DEEEREILAETGTHVT--HC 277 (445)
T ss_pred HHHhC------------------------CCHHHHHHHCC----CCCCCcEEEEEecC--CHHHHHHHHHcCCeEE--EC
Confidence 00000 00111112111 11556788888752 2334566677787654 46
Q ss_pred cccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHH
Q 010547 321 PHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPV 400 (507)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 400 (507)
|..- +. ......++.++++.|+++++|||+.+.....+. | .+..+..
T Consensus 278 P~~~------~~-------------~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~-----~---------~~~~~~~ 324 (445)
T PRK07228 278 PSSN------LK-------------LASGIAPVPDLLERGINVALGADGAPCNNTLDP-----F---------TEMRQAA 324 (445)
T ss_pred hHHh------hh-------------cccccCcHHHHHHCCCeEEEcCCCCccCCCccH-----H---------HHHHHHH
Confidence 6421 00 011234667889999999999998654321111 0 0111111
Q ss_pred HHHHHH---hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCc---
Q 010547 401 TWSYGR---KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGR--- 473 (507)
Q Consensus 401 ~~~~~~---~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~--- 473 (507)
.+.... ...++++++++++|.|||+++|+ +++|+|++|+.|||+++|.+.....+.. . .+++..+
T Consensus 325 ~~~~~~~~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~----~----~~~~~~~~~~ 396 (445)
T PRK07228 325 LIQKVDRLGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSH----G----VDVLSHLVYA 396 (445)
T ss_pred HHhhhccCCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCc----c----cCHHHHhhee
Confidence 111111 13589999999999999999999 6789999999999999998864332211 0 1222211
Q ss_pred EEeeEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 474 RLSGKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 474 ~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
.....|..|||+|++||++|+++..+++..
T Consensus 397 ~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~ 426 (445)
T PRK07228 397 AHGSDVETTMVDGKIVMEDGELTTIDADAV 426 (445)
T ss_pred CCCCCeeEEEECCEEEEECCeEccCCHHHH
Confidence 112469999999999999999987765543
No 38
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=1e-32 Score=274.67 Aligned_cols=345 Identities=21% Similarity=0.274 Sum_probs=224.6
Q ss_pred cceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChh
Q 010547 42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~ 119 (507)
+.+++|+|++|+++.. ...++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+..++.. ...
T Consensus 2 ~~~~li~~~~i~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~viD~~g~~v~PGliD~H~H~~~~g~~---~~~ 74 (379)
T PRK12394 2 KNDILITNGHIIDPARNINEINNLRIINDIIVDADKYPVA----SETRIIHADGCIVTPGLIDYHAHVFYDGTE---GGV 74 (379)
T ss_pred CccEEEECcEEECCCCCcccccEEEEECCEEEEEcCCCCC----CCCeEEECCCCEEECCEEEeeecCCCCCcc---ccc
Confidence 3568999999998763 4567899999999999875322 246899999999999999999999654422 223
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh---cCceeeEEEeccccCC-C---c---ccHHHHHHHHH--
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIYVDVGFWGGLVPE-N---A---YNASALEALLN-- 187 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~-- 187 (507)
.....++++||||+++++ .. .....+.+.....+.. .+..+.+..++..... . . ...++..++.+
T Consensus 75 ~~~~~~l~~G~Ttv~d~g-~~--~~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (379)
T PRK12394 75 RPDMYMPPNGVTTVVDAG-SA--GTANFDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQY 151 (379)
T ss_pred CHHHHHHhCCccEEEECC-CC--CcccHHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHC
Confidence 344568999999999986 22 2233444444433233 3344444444322111 0 1 11245555543
Q ss_pred -cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 188 -AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 188 -~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
.++.+++.++.... . ...+++.+.+.++.|++++.++.+|+++... +
T Consensus 152 ~~~~~g~ki~~~~~~-~--~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~----------------------------~- 199 (379)
T PRK12394 152 RNVLQGLKLRVQTED-I--AEYGLKPLTETLRIANDLRCPVAVHSTHPVL----------------------------P- 199 (379)
T ss_pred cCcEEEEEEEEeccc-c--cccchHHHHHHHHHHHHcCCCEEEEeCCCCc----------------------------c-
Confidence 35667776542211 1 1467899999999999999999999965432 0
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCC-------h--hHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCc
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-------A--SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 337 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~-------~--~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (507)
..+.+.+... + ....|+.. . ....+.++.++++|+.+... ++
T Consensus 200 --~~~~~~~l~~--------g--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~g---------------- 250 (379)
T PRK12394 200 --MKELVSLLRR--------G--DIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAA-NG---------------- 250 (379)
T ss_pred --HHHHHHhcCC--------C--CEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEec-CC----------------
Confidence 1122222221 2 12344422 1 13356777788888533221 11
Q ss_pred eeEcCCCCChhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHH
Q 010547 338 FKCAPPIRDAANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLA 416 (507)
Q Consensus 338 ~~~~p~~~~~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al 416 (507)
+...+.+.+++++.+|+ ++++|||+.+++.... . ...+..++....+.++++++++
T Consensus 251 -------~s~~~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~---------------~-~~~l~~~~~~~~~~~~~~~~~~ 307 (379)
T PRK12394 251 -------RSHFDMNVARRAIANGFLPDIISSDLSTITKLAW---------------P-VYSLPWVLSKYLALGMALEDVI 307 (379)
T ss_pred -------ccccchHHHHHHHHCCCCceEEECCCCCCCcccC---------------c-cchHHHHHHHHHHcCCCHHHHH
Confidence 01122345578899995 8999999988753211 0 0114445556667899999999
Q ss_pred HHHhhchhHHhCCC-CCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee----EEEEEEECCEEEEe
Q 010547 417 SWWSERPAKLAGQV-SKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG----KVLATISRGNLVYK 491 (507)
Q Consensus 417 ~~~T~n~A~~lgl~-~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~V~~v~v~G~~v~~ 491 (507)
+++|.|||+++|++ +.|+|++|+.|||+++|.+.++.. ..-+.+....+ .|..|||+|++||+
T Consensus 308 ~~at~~~a~~~g~~~~~G~i~~G~~ADl~~~~~~~~~~~------------~~d~~g~~~~~~~~~~v~~t~v~G~~v~~ 375 (379)
T PRK12394 308 NACTHTPAVLMGMAAEIGTLAPGAFADIAIFKLKNRHVE------------FADIHGETLTGTHVLVPQMTIKSGEILYR 375 (379)
T ss_pred HHHHHHHHHHhCCCCCCCccCCCCccCEEEEecCcCcce------------eccCCCCEEEeeeecceEEEEECCEEEEe
Confidence 99999999999994 789999999999999998875431 22245566655 69999999999998
Q ss_pred c
Q 010547 492 E 492 (507)
Q Consensus 492 ~ 492 (507)
+
T Consensus 376 ~ 376 (379)
T PRK12394 376 Q 376 (379)
T ss_pred c
Confidence 5
No 39
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=2e-33 Score=284.35 Aligned_cols=372 Identities=17% Similarity=0.191 Sum_probs=219.0
Q ss_pred eEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC-----
Q 010547 44 QYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW----- 115 (507)
Q Consensus 44 ~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~----- 115 (507)
+++|+|++|++++. +.+++|+|+||+|++||+... . ..++||++|++|+|||||+|+|+........
T Consensus 2 ~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~-~----~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~~~ 76 (418)
T PRK06380 2 SILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE-E----ADYIIDATGKVVMPGLINTHAHVGMTASKGLFDDVD 76 (418)
T ss_pred eEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC-C----CCEEEECCCCEEccCEEeeccCCCccccCCcccCCC
Confidence 47899999998763 458899999999999998542 1 4689999999999999999999975422210
Q ss_pred -----------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecc-ccC
Q 010547 116 -----------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-LVP 173 (507)
Q Consensus 116 -----------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 173 (507)
+. ......+++++||||++++. . ..+.+.+.......+..+....... ...
T Consensus 77 l~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~-~------~~~~~~~a~~~~G~r~~~~~~~~~~~~~~ 149 (418)
T PRK06380 77 LEEFLMKTFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLY-Y------SEDIIAKAAEELGIRAFLSWAVLDEEITT 149 (418)
T ss_pred HHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccc-c------ChHHHHHHHHHhCCeEEEecccccCCccc
Confidence 00 11234577899999999774 1 1223322222222222222111110 000
Q ss_pred CCcccHHHHHHHHH--cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCcCCc
Q 010547 174 ENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTLDT 250 (507)
Q Consensus 174 ~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~~ 250 (507)
......+...++.+ .+..-+...+.+ .+...+++++++++++.|++++.++.+|+.+... +.......+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g----- 221 (418)
T PRK06380 150 QKGDPLNNAENFIREHRNEELVTPSIGV---QGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRTG----- 221 (418)
T ss_pred ccchHHHHHHHHHHHhcCCCCeEEEEEC---CCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHhC-----
Confidence 00111112222222 111112222222 3445679999999999999999999999965321 100000000
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccC
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 330 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~ 330 (507)
...++.+..+.. .+.++.+.|+... +.+.++.+++.|+.+. +||.....
T Consensus 222 ---------------~~~ie~~~~~g~--------l~~~~~~~H~~~l--~~~d~~~la~~g~~v~--~~P~sn~~---- 270 (418)
T PRK06380 222 ---------------ERPVEHLEKIGF--------LNSKLIAAHCVWA--TYHEIKLLSKNGVKVS--WNSVSNFK---- 270 (418)
T ss_pred ---------------CCHHHHHHHCCC--------CCCCeEEEEeecC--CHHHHHHHHHcCCEEE--ECHHHHHh----
Confidence 000111111111 1445677777663 3345777777786554 36642100
Q ss_pred CCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh-HHHHHHHHHH---
Q 010547 331 IPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPVTWSYGR--- 406 (507)
Q Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~--- 406 (507)
+ +. ....++.++++.|+.+++|||....+...++ ++. .+........
T Consensus 271 l---~~-----------~g~~p~~~~~~~Gv~v~lGTD~~~~~~~~d~---------------~~~~~~~~~~~~~~~~~ 321 (418)
T PRK06380 271 L---GT-----------GGSPPIPEMLDNGINVTIGTDSNGSNNSLDM---------------FEAMKFSALSVKNERWD 321 (418)
T ss_pred h---cc-----------CCCCcHHHHHHCCCeEEEcCCCCcCCCCcCH---------------HHHHHHHHHHhhhccCC
Confidence 0 00 0122456888999999999997533211111 110 0111111001
Q ss_pred hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe---eEEEEEE
Q 010547 407 KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVLATI 483 (507)
Q Consensus 407 ~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~v~ 483 (507)
...++++++++++|.|||++||+ +.|+|++||.||||++|.+.+...+.. . .+|+..+... ..|..||
T Consensus 322 ~~~~~~~~~l~~aT~~gA~~lg~-~~G~l~~G~~ADlvv~d~~~~~~~p~~-------~-~~~~~~lv~~~~~~~v~~v~ 392 (418)
T PRK06380 322 ASIIKAQEILDFATINAAKALEL-NAGSIEVGKLADLVILDARAPNMIPTR-------K-NNIVSNIVYSLNPLNVDHVI 392 (418)
T ss_pred CCcCCHHHHHHHHHHHHHHHhCC-CCCccCCCccCCEEEEeCCCCccCCCC-------c-cChHHheeecCCCCceeEEE
Confidence 11379999999999999999999 489999999999999998765443211 0 2334434333 3699999
Q ss_pred ECCEEEEecCcccCCCCCccc
Q 010547 484 SRGNLVYKEGNHAPAACGSPI 504 (507)
Q Consensus 484 v~G~~v~~~g~~~~~~~~~~~ 504 (507)
|+|++++++|++++.+.++.+
T Consensus 393 v~G~~v~~~g~~~~~d~~~~~ 413 (418)
T PRK06380 393 VNGKILKENGRLNGFNPDEFI 413 (418)
T ss_pred ECCEEEEECCeECccCHHHHh
Confidence 999999999999987766543
No 40
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=1.2e-33 Score=286.64 Aligned_cols=368 Identities=18% Similarity=0.196 Sum_probs=216.6
Q ss_pred EEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC---CCC-----
Q 010547 45 YWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT----- 113 (507)
Q Consensus 45 ~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~---~~~----- 113 (507)
++|+|++|+++++ ..+++|+|+||||++|++..+.+. +.+.++||++|++|+|||||+|+|+... +..
T Consensus 1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~-~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~~~~ 79 (411)
T cd01298 1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPA-YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLPL 79 (411)
T ss_pred CeEEeeEEEEeCCcceeecceEEEECCEEEEecCcccccc-CCcCeEEeCCCCEEccCccccccchhhHHhhcccCCCCH
Confidence 4799999999853 568999999999999998755321 2367899999999999999999998642 110
Q ss_pred ---------------CCCChh----HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC-
Q 010547 114 ---------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP- 173 (507)
Q Consensus 114 ---------------~~~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (507)
+.+.+. ..+..++++||||++++. ...+ +...+..+....+..+...... ...
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~-----~~~~~~~~~~g~r~~~~~~~~~-~~~~ 152 (411)
T cd01298 80 MEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMY-FFYP-----DAVAEAAEELGIRAVLGRGIMD-LGTE 152 (411)
T ss_pred HHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECcc-ccch-----HHHHHHHHHhCCeEEEEcceec-CCCc
Confidence 011111 234456799999999885 2221 2222222211112111111110 100
Q ss_pred ---CCcccHHHHHHH----HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhccc
Q 010547 174 ---ENAYNASALEAL----LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLED 245 (507)
Q Consensus 174 ---~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~ 245 (507)
......++..++ ...|...++.++... .....+++++.++++.|+++|.++.+|+.+... ........+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~ 229 (411)
T cd01298 153 DVEETEEALAEAERLIREWHGAADGRIRVALAPH---APYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYG 229 (411)
T ss_pred ccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCC---CCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhC
Confidence 011112222222 233455666665432 223468899999999999999999999743321 110000000
Q ss_pred CcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccc
Q 010547 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325 (507)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~ 325 (507)
....+...+.+ ..+.++.+.|+... +.+.++.+++.|+.+ .+||....
T Consensus 230 ------------------------~~~~~~~~~~~----~~~~~~~i~H~~~l--~~~~~~~l~~~gi~~--~~~p~~~~ 277 (411)
T cd01298 230 ------------------------KRPVEYLEELG----LLGPDVVLAHCVWL--TDEEIELLAETGTGV--AHNPASNM 277 (411)
T ss_pred ------------------------CCHHHHHHHcC----CCCCCeEEEEecCC--CHHHHHHHHHcCCeE--EEChHHhh
Confidence 00111111110 11455677777753 335677778888654 44664211
Q ss_pred ccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh-HHHHHHHH
Q 010547 326 FSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPVTWSY 404 (507)
Q Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~ 404 (507)
. + + ....++.+++++|+.+++|||+.++....+ .+.. .+...+..
T Consensus 278 ~----~---~------------~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~~---------------~~~~~~~~~~~~~ 323 (411)
T cd01298 278 K----L---A------------SGIAPVPEMLEAGVNVGLGTDGAASNNNLD---------------MFEEMRLAALLQK 323 (411)
T ss_pred h----h---h------------hCCCCHHHHHHCCCcEEEeCCCCccCCCcC---------------HHHHHHHHHHHhc
Confidence 0 0 0 011235678889999999999764321111 1111 11111111
Q ss_pred HH---hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEE
Q 010547 405 GR---KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLA 481 (507)
Q Consensus 405 ~~---~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 481 (507)
.. +.+++++++++++|.|||+++|++++|+|++|+.|||+++|.+..+..+.. ++.+. +......+.|..
T Consensus 324 ~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i~~G~~ADlvv~d~~~~~~~~~~-~~~~~------~~~~~~~~~v~~ 396 (411)
T cd01298 324 LAHGDPTALPAEEALEMATIGGAKALGLDEIGSLEVGKKADLILIDLDGPHLLPVH-DPISH------LVYSANGGDVDT 396 (411)
T ss_pred cccCCCCcCCHHHHHHHHHhhHHHHhCCccCCCcCCCccCCEEEEeCCCCccCCcc-chhhH------heEecCCCCeeE
Confidence 11 126999999999999999999996679999999999999998865544322 11111 000112357999
Q ss_pred EEECCEEEEecCccc
Q 010547 482 TISRGNLVYKEGNHA 496 (507)
Q Consensus 482 v~v~G~~v~~~g~~~ 496 (507)
||++|++||++|+++
T Consensus 397 v~~~G~~v~~~~~~~ 411 (411)
T cd01298 397 VIVNGRVVMEDGELL 411 (411)
T ss_pred EEECCEEEEECCEeC
Confidence 999999999999864
No 41
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.8e-32 Score=272.41 Aligned_cols=349 Identities=21% Similarity=0.261 Sum_probs=229.2
Q ss_pred CcceEEEEecEEECC-CCceeeeEEEeCCEEEEeecCCCCCC---------CCCCCcEEecCCCEEecceeecccccCCC
Q 010547 41 PYNQYWLTSKRIVTP-KGVISGAVEIKEGNIISIVSEEDWPR---------NSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~-~~~~~~~I~I~dG~I~~Vg~~~~~~~---------~~~~~~viD~~g~~v~PGfID~H~H~~~~ 110 (507)
...+++|+|++|+|+ .++..++|.|+||||++|++..++.. ...++++||++|++|+|||||+|+|+..+
T Consensus 66 ~~~DlVItNa~IIDp~~Gi~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~~~P 145 (569)
T PRK13308 66 GALDFVLCNVTVIDPVLGIVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHFDSA 145 (569)
T ss_pred CcCCEEEECeEEEcCCCCeEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCCCCc
Confidence 356899999999996 45778999999999999997642210 01257899999999999999999998764
Q ss_pred CCCCCCChhHHHHHHHhCCceEEEeCCCC-CCC-CCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 111 GRTEWEGFPSGTKAAAAGGITTLIDMPLN-SDP-STISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 111 ~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
.. .+.++++||||+++++++ +.| .......+....+..+. ..+++.+++.... ...+.+.++.+.
T Consensus 146 g~---------~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~~-~pvN~g~~gkG~~---s~~aeL~eli~a 212 (569)
T PRK13308 146 QL---------VDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEA-WPVNFGFLGRGNS---SKPAALIEQVEA 212 (569)
T ss_pred cH---------HHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHhc-CCccEEEEcCCcc---cCHHHHHHHHHC
Confidence 32 378899999999986321 112 24556667777766664 4678877654322 346788888999
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
|+.++|.+..+ ..+++.+.++++.|++++.++.+|++.... ...
T Consensus 213 GA~GfKi~ed~-------g~t~~~i~~aL~~A~~~dv~VaiHadtlne-----------------------------~g~ 256 (569)
T PRK13308 213 GACGLKIHEDW-------GAMPAAIDTCLEVADEYDFQVQLHTDTLNE-----------------------------SGF 256 (569)
T ss_pred CCCEEeecCCC-------CCCHHHHHHHHHHHHhcCCEEEEeCCCcCc-----------------------------chH
Confidence 99999986422 458899999999999999999999976432 123
Q ss_pred HHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCC
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 346 (507)
++..+..+. |..+|+.|...+. -..+.++.+...++..+ .+.| ...++.+.+...-...+.+..+..
T Consensus 257 ~E~t~~a~~---------gr~iH~~H~egaggghapd~l~~~~~~n~lp~-stnp-t~p~t~nt~~e~~dm~m~~h~l~~ 325 (569)
T PRK13308 257 VEDTLAAIG---------GRTIHMYHTEGAGGGHAPDIIRVVGEPHCLPS-STNP-TNPYTVNTFDEHLDMTMVCHHLNP 325 (569)
T ss_pred HHHHHHHhc---------CCeEEEEeccCCccCchhHHHHHhCCCCccCC-CCCC-CCCCccCchhhhcCeEEEecCCCC
Confidence 344454444 8889999998641 12333444333333211 1222 233334444333223333322210
Q ss_pred --hhhHHH---------H--HH-HHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh----c
Q 010547 347 --AANKEK---------L--WE-ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK----Y 408 (507)
Q Consensus 347 --~~~~~~---------~--~~-~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~ 408 (507)
+++.+. + -. +-..|+...+.||... ++.+...+...|..+.+ .
T Consensus 326 ~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~-------------------mgr~~e~i~r~~q~a~~~~~~~ 386 (569)
T PRK13308 326 DVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQG-------------------MGRIAEVIARTWQLASKMKDQR 386 (569)
T ss_pred CCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHH-------------------HhHHHHHHHHHHHHHHHHhhcC
Confidence 111110 0 01 1234889999999652 22222334444444322 2
Q ss_pred -CCCHHH-----------HHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE
Q 010547 409 -GVTLEQ-----------LASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL 475 (507)
Q Consensus 409 -gls~~~-----------al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (507)
.++.++ .++++|.|||+++|+ +++|+|++||.||||+|+.+. +. .
T Consensus 387 g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~----------fg--v---------- 444 (569)
T PRK13308 387 GPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAF----------FG--I---------- 444 (569)
T ss_pred CCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcc----------cC--C----------
Confidence 266554 799999999999999 678999999999999999652 10 0
Q ss_pred eeEEEEEEECCEEEEec
Q 010547 476 SGKVLATISRGNLVYKE 492 (507)
Q Consensus 476 ~~~V~~v~v~G~~v~~~ 492 (507)
++..||++|+++|..
T Consensus 445 --~p~~ti~~G~iv~~~ 459 (569)
T PRK13308 445 --KPELVIKGGFPAWAA 459 (569)
T ss_pred --CeeEEEECCEEEEec
Confidence 467899999999864
No 42
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.5e-32 Score=274.25 Aligned_cols=355 Identities=20% Similarity=0.226 Sum_probs=229.6
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCC---------CCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPR---------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~---------~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..+++|+|++|+|..++..++|.|+||+|++|++...... ...+.++||++|++|+|||||+|+|+..+.
T Consensus 70 ~~DlVI~Na~IiD~~gi~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~~~Pg- 148 (573)
T PRK13206 70 APDTVITGAVILDHWGIVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHFICPQ- 148 (573)
T ss_pred CCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeeccCCch-
Confidence 5679999999999888788999999999999997532210 012578999999999999999999987543
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCC----CCCCCCHH--HHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNS----DPSTISTE--TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~----~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
..+.++++||||+++++.+. .+...... .+....+..+ ...+++.+++.. .....+.+.++.
T Consensus 149 --------~~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~-~~pvn~g~~g~g---~~~~~~~L~el~ 216 (573)
T PRK13206 149 --------IVDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALD-GWPVNVALLGKG---NTVSAEALWEQL 216 (573)
T ss_pred --------HHHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhh-cCceeEEEecCc---CcCCHHHHHHHH
Confidence 23889999999999864221 12212222 3334444444 467788877632 233456888999
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
+.|+.++|.+. .+..+++.+.++++.|++++.++.+|++.....
T Consensus 217 ~aGA~GfKi~~-------d~g~t~~~i~~aL~~A~~~gv~V~iHadtlne~----------------------------- 260 (573)
T PRK13206 217 RGGAGGFKLHE-------DWGSTPAAIDACLRVADAAGVQVALHSDTLNEA----------------------------- 260 (573)
T ss_pred HCCCcEEeecC-------ccCCCHHHHHHHHHHHHHhCCEEEEECCCcccc-----------------------------
Confidence 99999999863 235889999999999999999999999865431
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCC
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 344 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 344 (507)
..++..+..+. |..+|..|...+. -..+.++.+...++..+ .+.| ...++.+.+...-...+.+..+
T Consensus 261 g~~E~t~aa~~---------gr~iH~~H~egaggghapd~~~~~~~~n~lp~-stnp-t~p~~~nt~~e~~~m~m~~h~l 329 (573)
T PRK13206 261 GFVEDTLAAIA---------GRSIHAYHTEGAGGGHAPDIITVASHPNVLPS-STNP-TRPHTVNTLDEHLDMLMVCHHL 329 (573)
T ss_pred chhhHHHHHhc---------CCeEEEEeccCCCcCcccHHHHhcCCCCCcCC-CCCC-CCCCcccchhhhhCeEEeeccC
Confidence 12233444433 8899999998641 23445555444443221 1222 2333334333322223332222
Q ss_pred CC--hhhH---------HHH---HHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH----
Q 010547 345 RD--AANK---------EKL---WEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR---- 406 (507)
Q Consensus 345 ~~--~~~~---------~~~---~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---- 406 (507)
.. +++. +.+ -.+.+.|+..+++||..+....... . ...+........
T Consensus 330 ~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~-----~----------~~~~q~a~~~~~rr~~ 394 (573)
T PRK13206 330 NPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEV-----V----------LRTWQTAHVMKRRRGA 394 (573)
T ss_pred CCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccch-----h----------hhHHHHHHHHHhccCC
Confidence 10 0111 111 1245569999999997752111000 0 000111111111
Q ss_pred ------hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEE
Q 010547 407 ------KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKV 479 (507)
Q Consensus 407 ------~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 479 (507)
+..++.++++++.|.|||+++|+ +.+|+|++||.||||+||.+.. . -++
T Consensus 395 l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f----------~--------------~~~ 450 (573)
T PRK13206 395 LPGDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFF----------G--------------VRP 450 (573)
T ss_pred CCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECcccc----------C--------------CCc
Confidence 22388999999999999999999 6789999999999999996520 0 046
Q ss_pred EEEEECCEEEEec-Ccc
Q 010547 480 LATISRGNLVYKE-GNH 495 (507)
Q Consensus 480 ~~v~v~G~~v~~~-g~~ 495 (507)
..||++|+++|.. |..
T Consensus 451 ~~ti~~G~iv~~~~gd~ 467 (573)
T PRK13206 451 HAVLKGGAIAWAAMGDA 467 (573)
T ss_pred cEEEECCEEEEecCCCh
Confidence 7899999999976 544
No 43
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=7.4e-33 Score=282.54 Aligned_cols=375 Identities=16% Similarity=0.147 Sum_probs=221.8
Q ss_pred EEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC-----
Q 010547 45 YWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW----- 115 (507)
Q Consensus 45 ~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~----- 115 (507)
+++.|+.|+++++ +.+++|+|+||+|++|++..+.+. .+.++||++|++|+|||||+|+|+........
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~--~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~~~ 81 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQ--PADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAAQD 81 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCC--CCCeEEeCCCCEEecceEeccccccchhcccccccCC
Confidence 4555579999876 357899999999999999765432 26789999999999999999999976422110
Q ss_pred ----C---------------C----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec---
Q 010547 116 ----E---------------G----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG--- 169 (507)
Q Consensus 116 ----~---------------~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 169 (507)
+ . ......+++++||||++++. ...|.. ....+....++....+..-+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~-~~~~~~-~~~~~~~~~~a~~~~G~R~~~~~~~~~ 159 (451)
T PRK08203 82 AELFPWLTTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHH-YLFPNG-LRDALDDQIEAAREIGMRFHATRGSMS 159 (451)
T ss_pred CcHHHHHHHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcce-eecccc-ccchHHHHHHHHHHcCCeEEEecceee
Confidence 0 0 11234567899999999875 222321 122233333333322111111100
Q ss_pred ------cccCC-----CcccHHHHHHHHHcCC-----cEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 170 ------GLVPE-----NAYNASALEALLNAGV-----LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 170 ------~~~~~-----~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
+.... ..+..+...+..+.+. .-++..+.+ ......+++.++++++.|+++|.++.+|+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~---~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e 236 (451)
T PRK08203 160 LGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAP---CSPFSVSRELMRESAALARRLGVRLHTHLAE 236 (451)
T ss_pred cCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCCcCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 00110 0111233333333221 123322222 2234678999999999999999999999843
Q ss_pred ccc-chhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCC
Q 010547 234 EKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNG 312 (507)
Q Consensus 234 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g 312 (507)
... ........+ ..-++.+.+.+ ..+.++.+.|+..- +.+.++.+++.|
T Consensus 237 ~~~~~~~~~~~~g------------------------~~~~~~l~~~g----~l~~~~~~~H~~~l--~~~~~~~la~~g 286 (451)
T PRK08203 237 TLDEEAFCLERFG------------------------MRPVDYLEDLG----WLGPDVWLAHCVHL--DDAEIARLARTG 286 (451)
T ss_pred CHHHHHHHHHHhC------------------------CCHHHHHHHcC----CCCCCeEEEEEeCC--CHHHHHHHHhcC
Confidence 221 110000000 00011122211 11556777777763 344677777888
Q ss_pred CCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCc
Q 010547 313 DSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGIS 392 (507)
Q Consensus 313 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
+.+.. ||..... ......++.++++.|+++++|||+.+++...+
T Consensus 287 ~~v~~--~P~~~~~-------------------l~~~~~~~~~~~~~Gv~v~lGtD~~~~~~~~~--------------- 330 (451)
T PRK08203 287 TGVAH--CPCSNMR-------------------LASGIAPVRELRAAGVPVGLGVDGSASNDGSN--------------- 330 (451)
T ss_pred CeEEE--CcHHhhh-------------------hccCCCCHHHHHHCCCeEEEecCCCccCCCcC---------------
Confidence 76543 6631100 00111245678889999999999764321111
Q ss_pred hhhh-HHHHHHHHHH--hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCcc
Q 010547 393 SLQF-VLPVTWSYGR--KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISA 469 (507)
Q Consensus 393 ~~~~-~l~~~~~~~~--~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~ 469 (507)
.+.. .+........ ...++++++++++|.|||+++|++++|+|++||.|||+++|.+.+.. ... ++|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d~~~~~~---------~~~-~~p 400 (451)
T PRK08203 331 LIGEARQALLLQRLRYGPDAMTAREALEWATLGGARVLGRDDIGSLAPGKLADLALFDLDELRF---------AGA-HDP 400 (451)
T ss_pred HHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCccCEEEEcCCcccc---------CCc-cCh
Confidence 1111 1111111111 22489999999999999999999767999999999999999886432 122 455
Q ss_pred ccCcEE--eeEEEEEEECCEEEEecCcccCCCCCc
Q 010547 470 YLGRRL--SGKVLATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 470 ~~~~~~--~~~V~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
|.++.. .+.|..||++|++||++|++++.+..+
T Consensus 401 ~~~l~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~ 435 (451)
T PRK08203 401 VAALVLCGPPRADRVMVGGRWVVRDGQLTTLDLAA 435 (451)
T ss_pred HHHHHccCCCCccEEEECCEEEEECCcccCCCHHH
Confidence 554433 357999999999999999998766543
No 44
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-33 Score=282.42 Aligned_cols=368 Identities=18% Similarity=0.170 Sum_probs=219.6
Q ss_pred cceEEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC---
Q 010547 42 YNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--- 114 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~--- 114 (507)
+.+++|+|++|++.++ +.+++|+|+||+|++|++..+.+ +.++||++|++|+|||||+|+|+.......
T Consensus 1 ~~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~~----~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~~ 76 (449)
T PRK08204 1 MKRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEAP----DAEVVDARGMIVMPGLVDTHRHTWQSVLRGIGA 76 (449)
T ss_pred CCcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCCC----CCeEEeCCCCEEecCEEeeeeccchhhhccccC
Confidence 3567899999998654 35789999999999999865432 568999999999999999999985321100
Q ss_pred ------CC-----C-------------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecc
Q 010547 115 ------WE-----G-------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170 (507)
Q Consensus 115 ------~~-----~-------------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (507)
+- . .......++++||||++++. ...+ .........+.+...+...+...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~-~~~~---~~~~~~~~~~~~~~~G~r~~~~~~~ 152 (449)
T PRK08204 77 DWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWS-HINN---SPEHADAAIRGLAEAGIRAVFAHGS 152 (449)
T ss_pred CCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecc-cccC---ChhHHHHHHHHHHHcCCeEEEEccc
Confidence 00 0 11234578999999999875 2111 1222222233332211111111110
Q ss_pred ccC-------CCcccHHHHHHHHH---cCCcE-EEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchh
Q 010547 171 LVP-------ENAYNASALEALLN---AGVLG-LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (507)
Q Consensus 171 ~~~-------~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 239 (507)
... ......+....+.+ .+... +...... .+....+++.+.++++.|+++|.++.+|+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~--- 226 (449)
T PRK08204 153 PGPSPYWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAI---RGPEFSSWEVARADFRLARELGLPISMHQGFGPW--- 226 (449)
T ss_pred cCCCCCCCcchhhhhHHHHHHHHHhhccCCCCceEEEEec---CCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCc---
Confidence 100 01112222332222 22211 1111111 2223467899999999999999999999953221
Q ss_pred hhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEec
Q 010547 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319 (507)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~ 319 (507)
. . ....++.+ .+.+ ..+.+..+.|+... +.+.++.+++.|+.+..
T Consensus 227 ------------~-----~------~~~~~~~l----~~~g----~~~~~~~i~H~~~~--~~~~~~~la~~g~~v~~-- 271 (449)
T PRK08204 227 ------------G-----A------TPRGVEQL----HDAG----LLGPDLNLVHGNDL--SDDELKLLADSGGSFSV-- 271 (449)
T ss_pred ------------c-----c------CCCHHHHH----HHCC----CCCCCeEEEecCCC--CHHHHHHHHHcCCCEEE--
Confidence 0 0 00011222 2211 12566788898873 34567788888887654
Q ss_pred ccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh-HH
Q 010547 320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VL 398 (507)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 398 (507)
||..... .+ ....++.+++++|+.+++|||..+.+.... ++. .+
T Consensus 272 ~P~~~~~-------~g------------~~~~~~~~~~~~Gv~v~lGtD~~~~~~~~~----------------~~~~~~ 316 (449)
T PRK08204 272 TPEIEMM-------MG------------HGYPVTGRLLAHGVRPSLGVDVVTSTGGDM----------------FTQMRF 316 (449)
T ss_pred ChHHHhh-------hc------------CCCCcHHHHHhcCCceeeccccCCCCCcCH----------------HHHHHH
Confidence 6632100 00 011235677888999999999754321110 000 01
Q ss_pred HHHHHH--------------HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccC
Q 010547 399 PVTWSY--------------GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMK 463 (507)
Q Consensus 399 ~~~~~~--------------~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~ 463 (507)
...... ..+.+++++++++++|.|||+++|+ +++|+|++||.||||++|.+.+...+.
T Consensus 317 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~p~------- 389 (449)
T PRK08204 317 ALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLAPV------- 389 (449)
T ss_pred HHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCccccCC-------
Confidence 100000 0125689999999999999999999 668999999999999999875432211
Q ss_pred CCCCccccCcEE---eeEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 464 HPSISAYLGRRL---SGKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 464 ~~~~~~~~~~~~---~~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
.+|+..+.. ..+|..||++|++||++|+++..+..+.
T Consensus 390 ---~dp~~~lv~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~~ 429 (449)
T PRK08204 390 ---HDPVGAVVQSAHPGNVDSVMVAGRAVKRNGKLLGVDLERL 429 (449)
T ss_pred ---cChhhhheeccCCCCceEEEECCEEEEECCEeccCCHHHH
Confidence 233333332 2579999999999999999998765543
No 45
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.5e-32 Score=279.38 Aligned_cols=375 Identities=15% Similarity=0.161 Sum_probs=219.2
Q ss_pred ceEEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---C-
Q 010547 43 NQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---E- 114 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~- 114 (507)
.+++|+|+.|++++. +.+++|+|+||+|++|++....+..+++.++||++|++|+|||||+|+|+...... .
T Consensus 7 ~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~~~~ 86 (443)
T PRK09045 7 VDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMSLLRGLADD 86 (443)
T ss_pred ccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccCCcceEEeCCCCEEecCEeccccChhhHhhhhccCC
Confidence 588999999999763 35789999999999999875543333367899999999999999999999642110 0
Q ss_pred -----------C--C----C-------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec-
Q 010547 115 -----------W--E----G-------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG- 169 (507)
Q Consensus 115 -----------~--~----~-------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 169 (507)
+ + + ....+.+++++||||+.++. . ........ ..+.+....++...
T Consensus 87 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~------~~~~~~~~--~~~~G~R~~~~~~~~ 157 (443)
T PRK09045 87 LPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-F------FPEAAAEA--AHQAGMRAQIGMPVL 157 (443)
T ss_pred CCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-c------cHHHHHHH--HHHcCCeEEEecccc
Confidence 0 0 0 01234567899999999863 1 11221111 11222221111110
Q ss_pred cccCC-CcccHHHHH---HHHH--cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc-cchhhhh
Q 010547 170 GLVPE-NAYNASALE---ALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVK 242 (507)
Q Consensus 170 ~~~~~-~~~~~~~~~---~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~ 242 (507)
.+... .....+.++ ++.+ .+...++..+.+ .....++++.++++++.|+++|.++.+|+.... .+...+.
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~ 234 (443)
T PRK09045 158 DFPTAWASDADEYLAKGLELHDQWRHHPLISTAFAP---HAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADSLK 234 (443)
T ss_pred cCCCccccCHHHHHHHHHHHHHHhcCCCcEEEEEeC---CCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHHHH
Confidence 01000 011111121 2221 122334443332 223367899999999999999999999985321 1111110
Q ss_pred cccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccc
Q 010547 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~ 322 (507)
..+ . ..++.+ .+.+ ..+.+..+.|+... ..+.++.+++.|+.+. +||.
T Consensus 235 ~~g----------------~----~~~~~l----~~~g----~l~~r~~~~H~~~l--~~~~~~~la~~g~~i~--~~P~ 282 (443)
T PRK09045 235 QHG----------------Q----RPLARL----ARLG----LLGPRLIAVHMTQL--TDAEIALLAETGCSVV--HCPE 282 (443)
T ss_pred HhC----------------C----CHHHHH----HHcC----CCCCCeEEEEecCC--CHHHHHHHHHcCCeEE--ECHH
Confidence 000 0 001112 1111 11456667777753 3345666677776554 3663
Q ss_pred cccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHH
Q 010547 323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 402 (507)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 402 (507)
.. .. ......++.++++.|+.+++|||+.+.....++. .+..+...+
T Consensus 283 ~~------~~-------------~~~~~~~~~~l~~~Gv~v~lGtD~~~~~~~~~~~--------------~~~~~a~~~ 329 (443)
T PRK09045 283 SN------LK-------------LASGFCPVAKLLQAGVNVALGTDGAASNNDLDLF--------------GEMRTAALL 329 (443)
T ss_pred HH------hh-------------hccCCCcHHHHHHCCCeEEEecCCCCCCCCccHH--------------HHHHHHHHH
Confidence 10 00 0011234567788999999999976532211110 011111111
Q ss_pred HHH---HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCc---EE
Q 010547 403 SYG---RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGR---RL 475 (507)
Q Consensus 403 ~~~---~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 475 (507)
... ...+++++++++++|.|||+++|+ +++|+|++||.||||++|.+.....+. .+++..+ ..
T Consensus 330 ~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p~----------~~~~~~lv~~~~ 399 (443)
T PRK09045 330 AKAVAGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQPV----------YDPVSQLVYAAG 399 (443)
T ss_pred HhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCCc----------cChHhHhhEeCC
Confidence 111 123589999999999999999999 668999999999999999875422110 1111111 12
Q ss_pred eeEEEEEEECCEEEEecCcccCCCCCccc
Q 010547 476 SGKVLATISRGNLVYKEGNHAPAACGSPI 504 (507)
Q Consensus 476 ~~~V~~v~v~G~~v~~~g~~~~~~~~~~~ 504 (507)
...|..|||+|++||++|++++.+..+.+
T Consensus 400 ~~~v~~v~v~G~~v~~~g~~~~~d~~~~~ 428 (443)
T PRK09045 400 REQVSHVWVAGKQLLDDRELTTLDEAELL 428 (443)
T ss_pred CCCccEEEECCEEEEECCcCCCCCHHHHH
Confidence 24799999999999999999987766543
No 46
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=1.8e-32 Score=278.72 Aligned_cols=373 Identities=16% Similarity=0.092 Sum_probs=216.7
Q ss_pred EEEEecEEECCCC---c-eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC------
Q 010547 45 YWLTSKRIVTPKG---V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------ 114 (507)
Q Consensus 45 ~~i~n~~i~~~~~---~-~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~------ 114 (507)
++|+|++|++.++ + .+++|+|+||+|++||+..+....+++.++||++|++|+|||||+|+|+.......
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~~~ 81 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMANIP 81 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccccCCCeEEeCCCCEEecceeeccccchhhhhcccccccC
Confidence 6899999998543 2 36899999999999997533222122568999999999999999999986421110
Q ss_pred -CCC--------------------h----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec
Q 010547 115 -WEG--------------------F----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169 (507)
Q Consensus 115 -~~~--------------------~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (507)
... + ...+.+++++||||++++. ....... .......++....+...+...
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~-~~~~~~~--~~~~~~~~a~~~~GiR~~~~~- 157 (442)
T PRK07203 82 PPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHH-ASPNYIG--GSLFTIADAAKKVGLRAMLCY- 157 (442)
T ss_pred CCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccc-ccccccc--chHHHHHHHHHHhCCeEEEec-
Confidence 000 0 1123567899999999874 1111111 112222333322211111111
Q ss_pred cccCCC-cc----cHHHHHHHHH--cC--CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chh
Q 010547 170 GLVPEN-AY----NASALEALLN--AG--VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SER 239 (507)
Q Consensus 170 ~~~~~~-~~----~~~~~~~~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~ 239 (507)
+..... .. ..+...++.+ .+ ...+...+.+ ...+.++++.++++.+.|++++.++++|..+... ...
T Consensus 158 ~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p---~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~~~ 234 (442)
T PRK07203 158 ETSDRDGEKELQEGVEENIRFIKHIDEAKDDMVEAMFGL---HASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDVSD 234 (442)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHhcCCCCCceEEEEcc---CCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHHHH
Confidence 111111 11 1111122211 11 1123333322 3345678999999999999999999999855332 111
Q ss_pred hhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEec
Q 010547 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319 (507)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~ 319 (507)
.....+ ....+...+.+ . -+.++.+.|+.+- ..+.++.+++.|+.+. +
T Consensus 235 ~~~~~g------------------------~~~v~~l~~~G--l--l~~~~~~~H~~~~--~~~d~~~la~~g~~v~--~ 282 (442)
T PRK07203 235 SHKKYG------------------------KDIVERLADFG--L--LGEKTLAAHCIYL--SDEEIDLLKETDTFVV--H 282 (442)
T ss_pred HHHHcC------------------------CCHHHHHHhCC--C--CCCCcEEEEeecC--CHHHHHHHHhcCCeEE--E
Confidence 110000 01122222221 1 1556777777763 3345666777786654 4
Q ss_pred ccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHH
Q 010547 320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLP 399 (507)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 399 (507)
||.. +.. ......++.+++++|+.+++|||+...++...+ .+.
T Consensus 283 ~P~s------n~~-------------l~~g~~p~~~~~~~Gv~v~lGtD~~~~d~~~~~------------------~~a 325 (442)
T PRK07203 283 NPES------NMG-------------NAVGYNPVLEMIKNGILLGLGTDGYTSDMFESY------------------KVA 325 (442)
T ss_pred Cchh------hhh-------------cccCCCCHHHHHHCCCeEEEcCCCCCccHHHHH------------------HHH
Confidence 6631 110 111223456888999999999997644332211 111
Q ss_pred HHHHHHH--hcCCCHHHHHHHHhhchhHHhC--C-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcE
Q 010547 400 VTWSYGR--KYGVTLEQLASWWSERPAKLAG--Q-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR 474 (507)
Q Consensus 400 ~~~~~~~--~~gls~~~al~~~T~n~A~~lg--l-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (507)
.+..... ....+++++++++|.|||+++| + ++.|+|++||.|||+++|.+.++..+. .+|+..+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~~v 395 (442)
T PRK07203 326 NFKHKHAGGDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDYNPPTPLNE----------DNINGHIL 395 (442)
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcCCCCeecCc----------cccccceE
Confidence 1111111 1124578999999999999999 4 568999999999999999886544321 12222222
Q ss_pred E---eeEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 475 L---SGKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 475 ~---~~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
. ...|..|||+|++||++|+++..+..+.
T Consensus 396 ~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~i 427 (442)
T PRK07203 396 FGMNGGSVDTTIVNGKVVMEDRKFLNFDEESI 427 (442)
T ss_pred eecCCCceEEEEECCEEEEECCcccccCHHHH
Confidence 1 3579999999999999999988776543
No 47
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=100.00 E-value=6.2e-32 Score=268.48 Aligned_cols=357 Identities=22% Similarity=0.277 Sum_probs=230.0
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCC---------CCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPR---------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~---------~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..+++|+|++|++..++..++|.|+||||++|++...... ...+.++||++|++|+|||||+|+|+..+.+
T Consensus 64 ~~DlVI~Na~IiD~~gi~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~~~P~~ 143 (567)
T cd00375 64 VLDLVITNALIIDYTGIYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHFICPQQ 143 (567)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCCCCccH
Confidence 4579999999999887778999999999999998642210 0125689999999999999999999865422
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCC------CCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
.+.++++||||++++++ ++.+.......+...++.++. ..+++.+++.. ..+..+++.++.
T Consensus 144 ---------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~-~pin~g~~gkg---~~~~l~eL~e~~ 210 (567)
T cd00375 144 ---------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADG-LPVNIGFLGKG---NGSSPDALAEQI 210 (567)
T ss_pred ---------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhc-CCceEEEEecC---ccccHHHHHHHH
Confidence 47899999999999621 112333446777777776663 45777776532 234567888888
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
++|+.+|+.+.. +..++..+.++++.|++++.++.+|++.... .
T Consensus 211 ~aGA~GfK~~eD-------~g~t~~~i~~aL~~A~~~dv~VaiHadtlne-----------------------------~ 254 (567)
T cd00375 211 EAGACGLKLHED-------WGATPAAIDTCLSVADEYDVQVAIHTDTLNE-----------------------------S 254 (567)
T ss_pred HcCCEEEEecCC-------CCCCHHHHHHHHHHHHhhCCEEEEECCCCCc-----------------------------c
Confidence 999999998532 2458899999999999999999999976532 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCC
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 344 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 344 (507)
..++..+..+. |..+|..|...+. -..+.++.+...++..+ .+.| ...++.+.+...-...+.+..+
T Consensus 255 g~~E~t~aa~~---------gr~iH~~H~egaggghapdi~~~~~~~nvlp~-stnp-t~p~t~nt~~e~~dm~m~~h~l 323 (567)
T cd00375 255 GFVEDTIAAIK---------GRTIHTYHTEGAGGGHAPDIIKVAGHPNVLPS-STNP-TRPFTVNTLDEHLDMLMVCHHL 323 (567)
T ss_pred hHHHHHHHHhc---------CCeEEEEecCCCCcccchHHHHhcCCCCcccC-CCCC-CCCCccCchhhhcCeEEeecCC
Confidence 22334444433 8899999998641 12334444333333211 1222 2333344433322233332222
Q ss_pred CC--hhhH---------HHH--HHH-HhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcC
Q 010547 345 RD--AANK---------EKL--WEA-LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYG 409 (507)
Q Consensus 345 ~~--~~~~---------~~~--~~~-l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~g 409 (507)
.. +++. +.+ -.. -..|+...++||..+-- .++-+..++-....+. ...|
T Consensus 324 ~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mg----------------r~ge~~~r~~q~a~k~~~~~g 387 (567)
T cd00375 324 DPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMG----------------RVGEVILRTWQTAHKMKAQRG 387 (567)
T ss_pred CCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcC----------------ccceeeechHHHHHHHHHhcC
Confidence 10 0111 111 112 22489999999965211 1111111111111111 2223
Q ss_pred --------CCHH---HHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee
Q 010547 410 --------VTLE---QLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG 477 (507)
Q Consensus 410 --------ls~~---~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (507)
.+.. ..+++.|.|||+++|+ +++|+|++||.||||+|+.+.. . -
T Consensus 388 ~~~~~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f-----------~-------------~ 443 (567)
T cd00375 388 PLPEDSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFF-----------G-------------V 443 (567)
T ss_pred CCCcccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCccc-----------C-------------C
Confidence 2333 4499999999999999 7889999999999999996521 0 1
Q ss_pred EEEEEEECCEEEEec-CcccCC
Q 010547 478 KVLATISRGNLVYKE-GNHAPA 498 (507)
Q Consensus 478 ~V~~v~v~G~~v~~~-g~~~~~ 498 (507)
++..||++|+++|.. |....+
T Consensus 444 ~p~~vi~~G~iv~~~~gd~nas 465 (567)
T cd00375 444 KPEMVLKGGFIAYAQMGDPNAS 465 (567)
T ss_pred CeeEEEECCEEEEecCCCcccc
Confidence 468999999999987 665433
No 48
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=2.5e-33 Score=287.64 Aligned_cols=376 Identities=16% Similarity=0.146 Sum_probs=217.3
Q ss_pred eEEEEecEEECCCC-----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC-------C
Q 010547 44 QYWLTSKRIVTPKG-----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP-------G 111 (507)
Q Consensus 44 ~~~i~n~~i~~~~~-----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~-------~ 111 (507)
.++|+|+.|++.++ ..+++|+|+||+|++|++....+ +.++||++|++|+|||||+|+|+... .
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~~----~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~~~ 77 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDGE----VDRVIDAGNALVGPGFIDLDALSDLDTTILGLDN 77 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCCC----CCeEEeCCCCEEecCEEeeecccchhhhhccccc
Confidence 57899999976543 34789999999999999854321 46899999999999999999996410 0
Q ss_pred C------CCCC---------------Ch----hHHHHHHHhCCceEEEeCCCCCCCCC-CCHHHHHHHHHHHhc-Cceee
Q 010547 112 R------TEWE---------------GF----PSGTKAAAAGGITTLIDMPLNSDPST-ISTETLKLKVDAAEK-RIYVD 164 (507)
Q Consensus 112 ~------~~~~---------------~~----~~~~~~~l~~GvTt~~~~~~~~~p~~-~~~~~~~~~~~~~~~-~~~~~ 164 (507)
. ..|. .+ ...+.+++++||||++++.....+.. ..........++... +....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~GiR~~ 157 (488)
T PRK06151 78 GPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVY 157 (488)
T ss_pred chhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcCCeEE
Confidence 0 0000 00 12345789999999998641111111 111122222222222 11111
Q ss_pred EEE--ec-cc--------cC--CC---c----ccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 010547 165 VGF--WG-GL--------VP--EN---A----YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224 (507)
Q Consensus 165 ~~~--~~-~~--------~~--~~---~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 224 (507)
.+. .. +. .. .. . ...+.++++...|...++....+ ......+++.+.++++.|+++|
T Consensus 158 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p---~~~~~~s~e~l~~~~~~A~~~g 234 (488)
T PRK06151 158 LGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAP---DRIETCTVDLLRRTAAAARELG 234 (488)
T ss_pred ecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcC---CCCCCCCHHHHHHHHHHHHHCC
Confidence 110 00 00 00 00 0 01122333333455445554332 2334689999999999999999
Q ss_pred CcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH----
Q 010547 225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS---- 300 (507)
Q Consensus 225 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~---- 300 (507)
.++.+|+.+.......+.... . ...++...+.+. .+.++.+.|+...+.
T Consensus 235 ~~v~~H~~e~~~~~~~~~~~~-------------------g----~~~~~~~~~~g~----l~~r~~l~H~~~l~~~~~~ 287 (488)
T PRK06151 235 CPVRLHCAQGVLEVETVRRLH-------------------G----TTPLEWLADVGL----LGPRLLIPHATYISGSPRL 287 (488)
T ss_pred CcEEEEECCchHHHHHHHHHc-------------------C----CCHHHHHHHcCC----CCCCcEEEEEEEcCCcccc
Confidence 999999943221000000000 0 011222222210 144566666654211
Q ss_pred ---HHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhh
Q 010547 301 ---SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377 (507)
Q Consensus 301 ---~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~ 377 (507)
..+.++.+++.|+.+. +||... . . ......++.++++.|+.+++|||..+.++...
T Consensus 288 ~~~~~~~~~~la~~g~~v~--~~P~~~------~-~------------~g~~~~p~~~l~~~Gv~v~lGtD~~~~~~~~~ 346 (488)
T PRK06151 288 NYSGGDDLALLAEHGVSIV--HCPLVS------A-R------------HGSALNSFDRYREAGINLALGTDTFPPDMVMN 346 (488)
T ss_pred ccCCHHHHHHHHhcCCEEE--ECchhh------h-h------------hccccccHHHHHHCCCcEEEECCCCCccHHHH
Confidence 1267888888887654 355310 0 0 01122345678889999999999754332211
Q ss_pred ccccCCccccCCCCchhhhHHHHHHHHHHh---cCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEe
Q 010547 378 LLDEGNFLKAWGGISSLQFVLPVTWSYGRK---YGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFEL 454 (507)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~ 454 (507)
+ .+......... ..++++++++++|.|||+++|++++|+|++|+.|||+++|.+.....
T Consensus 347 ~------------------~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvvld~~~~~~~ 408 (488)
T PRK06151 347 M------------------RVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDDLGRLAPGAKADIVVFDLDGLHMG 408 (488)
T ss_pred H------------------HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCcCCEEEEeCCccccC
Confidence 1 01111111122 23799999999999999999995589999999999999997653221
Q ss_pred CCCCCcccCCCCCccccCcEEe---eEEEEEEECCEEEEecCcccCCCCCc
Q 010547 455 DNDHPVHMKHPSISAYLGRRLS---GKVLATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
+ . .+|+..+... ..|..|||+|++||++|+++..+..+
T Consensus 409 ~-~---------~d~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~ 449 (488)
T PRK06151 409 P-V---------FDPIRTLVTGGSGRDVRAVFVDGRVVMEDGRLPGVDLAA 449 (488)
T ss_pred C-c---------cCHHHHHHhhCCCCCccEEEECCEEEEECCeecCCCHHH
Confidence 1 1 2233322222 36999999999999999998766543
No 49
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-33 Score=275.43 Aligned_cols=343 Identities=21% Similarity=0.230 Sum_probs=204.2
Q ss_pred cceEEEEecEEECCCC-ceeeeEEEeCCEEEEeecCC-CCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCC--
Q 010547 42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEE-DWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG-- 117 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~-~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~-- 117 (507)
...+++.+++.++.-+ ++++.|+|+||||+.|++.. ..+ .+.++||++|++|+|||||+|+|+...+....+.
T Consensus 9 ~~~~~~~~~~~~~~~~~i~~~~v~i~~GkI~~vg~~~~~~~---~~~~viD~~G~~V~PGLID~HtHl~~~~~~~~~~~~ 85 (406)
T COG1228 9 IAMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIP---AGAEVIDAKGKTVTPGLIDAHTHLGFGGSRGGEFEL 85 (406)
T ss_pred hhhheeeccccCCCcceeecceEEEECCEEEEecCcccCCC---CCCeEEeCCCCEEccceeeccccccccCCccchhhh
Confidence 4556788889888544 56799999999999999884 333 3789999999999999999999998753331110
Q ss_pred -----------------------------------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCce
Q 010547 118 -----------------------------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY 162 (507)
Q Consensus 118 -----------------------------------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 162 (507)
.......++++|+|+.-... ........................
T Consensus 86 ~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~-~~g~~~~~e~~~~~~~~~~~~~~~ 164 (406)
T COG1228 86 REAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKS-GYGLDLETEGGHLRAAAGLKESRP 164 (406)
T ss_pred cccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceee-eecccccccccccchhhhcccccc
Confidence 01112344667777755432 111111111111111111111111
Q ss_pred eeEEEec-cccCCCc---ccH----H---H-HHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 010547 163 VDVGFWG-GLVPENA---YNA----S---A-LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (507)
Q Consensus 163 ~~~~~~~-~~~~~~~---~~~----~---~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 230 (507)
+.+.... .....++ ... . . +......|...... .....+..++++++++++.|++.+.++.+|
T Consensus 165 ~~~~~t~~~~~~~~~~~~~~r~~~~~g~~~~i~~~a~~~l~~~~d-----~~~~~~~fs~~e~~~~l~~a~~~g~~v~~H 239 (406)
T COG1228 165 VAVGSTPLAAHGVPEERKATREAYVAGARLLIKIVATGGLASFVD-----AFCEGGQFSPEEIRAVLAAALKAGIPVKAH 239 (406)
T ss_pred ccccCccccccCCcccccchHHHHHHHHHHHHHHHHhccccchhh-----ccccccccCHHHHHHHHHHHHHCCCceEEE
Confidence 1111100 0111111 111 1 1 22222223222221 013445789999999999999999999999
Q ss_pred cCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHh
Q 010547 231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT 310 (507)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~ 310 (507)
++..+. +.-.+++.. ..+.|... -..+-++.+++
T Consensus 240 A~~~~g--------------------------------~~~A~~~g~------------~s~~H~~~--ld~~~~~~~a~ 273 (406)
T COG1228 240 AHGADG--------------------------------IKLAIRLGA------------KSAEHGTL--LDHETAALLAE 273 (406)
T ss_pred ecccch--------------------------------HHHHHHhCc------------ceehhhhh--cCHhHHHHHhh
Confidence 965432 122222211 12344433 11223334444
Q ss_pred --CCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccC
Q 010547 311 --NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAW 388 (507)
Q Consensus 311 --~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~ 388 (507)
.|.++ ....|... +.. .......+..++++|++++++||+.+.....
T Consensus 274 ~~~g~~~-~~l~p~~~-------------~~l-----~e~~~~~~~~l~~~GV~vai~TD~~~~~~~~------------ 322 (406)
T COG1228 274 KGAGTPV-PVLLPRTK-------------FEL-----RELDYKPARKLIDAGVKVAIGTDHNPGTSHG------------ 322 (406)
T ss_pred ccCCCcc-ccccchhh-------------hhh-----hcccchhHHHHHHCCCEEEEEcCCCCCchhh------------
Confidence 44321 11111100 000 1223345678899999999999998776311
Q ss_pred CCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCC
Q 010547 389 GGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSI 467 (507)
Q Consensus 389 ~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~ 467 (507)
.+...+..+.+.+||++||++++|.|||++||+ +++|+||+||+||||+||.|+..++. +....
T Consensus 323 --------~l~~~m~l~~~~gmtp~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i~----y~~~~--- 387 (406)
T COG1228 323 --------SLALEMALAVRLGMTPEEALKAATINAAKALGLADKVGSLEPGKDADLVVWDGDPLADIP----YFLGL--- 387 (406)
T ss_pred --------HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccccccCCCccCEEEEcCCChhhcc----ccccC---
Confidence 145556667777899999999999999999999 88999999999999999999866541 11111
Q ss_pred ccccCcEEeeEEEEEEECCEEEEecCc
Q 010547 468 SAYLGRRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 468 ~~~~~~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
..|..||.+|+++|+.+.
T Consensus 388 ---------~~v~~v~k~G~~~~~~~~ 405 (406)
T COG1228 388 ---------NKVEAVIKDGKVVYERGS 405 (406)
T ss_pred ---------CceEEEEECCEEeecCCC
Confidence 269999999999997653
No 50
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.3e-31 Score=269.30 Aligned_cols=359 Identities=21% Similarity=0.242 Sum_probs=229.9
Q ss_pred cceEEEEecEEECC-CCceeeeEEEeCCEEEEeecCCCCCCC---------CCCCcEEecCCCEEecceeecccccCCCC
Q 010547 42 YNQYWLTSKRIVTP-KGVISGAVEIKEGNIISIVSEEDWPRN---------SKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111 (507)
Q Consensus 42 ~~~~~i~n~~i~~~-~~~~~~~I~I~dG~I~~Vg~~~~~~~~---------~~~~~viD~~g~~v~PGfID~H~H~~~~~ 111 (507)
..+++|+|++|+|+ .++..++|.|+||||++|++...+... ..+.++||++|++|+|||||+|+|+..+.
T Consensus 67 ~~DlVI~Ng~ViD~~~gi~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~~P~ 146 (572)
T PRK13309 67 VLDLVITNVTIVDARLGVIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLISPQ 146 (572)
T ss_pred cCCEEEECeEEEcCCCCEEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccCCcc
Confidence 56799999999996 567789999999999999975432100 01368999999999999999999987654
Q ss_pred CCCCCChhHHHHHHHhCCceEEEeCCCC------CCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHH
Q 010547 112 RTEWEGFPSGTKAAAAGGITTLIDMPLN------SDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185 (507)
Q Consensus 112 ~~~~~~~~~~~~~~l~~GvTt~~~~~~~------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (507)
. .+.++.+||||++..+++ +.+.......+....+.++. ..+++.+++.. .......+.++
T Consensus 147 ~---------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~-~pvn~g~~gkg---~~~~~~~l~el 213 (572)
T PRK13309 147 Q---------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEG-LPVNVGILGKG---NSYGRGPLLEQ 213 (572)
T ss_pred h---------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhcc-CCcCEEEEcCC---CCCCHHHHHHH
Confidence 2 268999999999975311 11223345567777666663 35777776532 22334667788
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 186 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
.+.|+.+++.+.. +..+++.+.++++.|++++.++.+|++....
T Consensus 214 ~~aGa~gfk~~~d-------~g~t~~~L~~aLe~A~~~gv~VaiH~d~lnE----------------------------- 257 (572)
T PRK13309 214 AIAGVAGYKVHED-------WGATAAALRHALRVADEVDIQVAVHTDSLNE----------------------------- 257 (572)
T ss_pred HhcCcEEEEecCc-------CCcCHHHHHHHHHHHHhcCCEEEEeCCcccc-----------------------------
Confidence 8999999998532 2358899999999999999999999976432
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCC----CCCcee
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFK 339 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~----~~~~~~ 339 (507)
...++..+... .+.++|..|...+- ...+.++.+...++..+ .+.| ...++.+.+.. .-....
T Consensus 258 ~g~vE~~~aa~---------~grpih~~H~~Gaggghapd~~~~~~~~~~~~~-st~p-t~p~~~~~~~e~~~m~m~~h~ 326 (572)
T PRK13309 258 CGYVEDTIDAF---------EGRTIHTFHTEGAGGGHAPDIIKVASQTNVLPS-STNP-TLPYGVNSQAELFDMIMVCHN 326 (572)
T ss_pred chhHHHHHHHh---------CCCceeeeeccCcccCCchhHHHhcCCCCcccC-CCCC-CCCCcccchHhhhchhhhhcc
Confidence 11223333332 28889999997541 22334444433333211 1122 22233332222 122222
Q ss_pred EcCCCCC----------hhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-----
Q 010547 340 CAPPIRD----------AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY----- 404 (507)
Q Consensus 340 ~~p~~~~----------~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 404 (507)
.+|.+.. .........+++.|+.++++||+...... +...+........+.
T Consensus 327 l~~~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~--------------~~~p~~~iq~Av~rk~~~g~ 392 (572)
T PRK13309 327 LNPNVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRV--------------GENWLRAIQTADAMKAARGK 392 (572)
T ss_pred CCCCCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCC--------------cccHHHHHHHHHHHHhccCC
Confidence 2333211 11123345667789999999997642100 000000000000000
Q ss_pred -----HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeE
Q 010547 405 -----GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGK 478 (507)
Q Consensus 405 -----~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (507)
.....+++.+++++.|.|||+++|+ +++|+|++||.|||+|||.+.. .. +
T Consensus 393 l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f-----------~~-------------~ 448 (572)
T PRK13309 393 LPEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFF-----------GA-------------K 448 (572)
T ss_pred CCccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhc-----------CC-------------C
Confidence 0012377889999999999999999 7899999999999999996521 11 4
Q ss_pred EEEEEECCEEEEec-CcccCC
Q 010547 479 VLATISRGNLVYKE-GNHAPA 498 (507)
Q Consensus 479 V~~v~v~G~~v~~~-g~~~~~ 498 (507)
+..||++|+++|.. |....+
T Consensus 449 ~~~vi~~G~iv~~~~gd~~as 469 (572)
T PRK13309 449 PKMVIKGGMINWAAMGDPNAS 469 (572)
T ss_pred ccEEEECCEEEEecCCCcccc
Confidence 68999999999988 766543
No 51
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=4.1e-32 Score=275.14 Aligned_cols=379 Identities=15% Similarity=0.120 Sum_probs=219.8
Q ss_pred EEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC-------
Q 010547 45 YWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------- 113 (507)
Q Consensus 45 ~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~------- 113 (507)
++|+|++|++.++ ..+++|+|+||+|++|++..+....+.+.++||++|++|+|||||+|+|+......
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d~~ 80 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYPEATFIDAKGKLIMPGFINTHNHFYSTFARGMMADIP 80 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCCCCeEEeCCCCEEecCeeecccchhhhhhccccccCC
Confidence 4789999997543 34789999999999999864332222356899999999999999999999643110
Q ss_pred ---CC-----------------CCh----hHHHHHHHhCCceEEEeCCCCCCC-CCCCHHHHHHHHHHHhcCceeeEEEe
Q 010547 114 ---EW-----------------EGF----PSGTKAAAAGGITTLIDMPLNSDP-STISTETLKLKVDAAEKRIYVDVGFW 168 (507)
Q Consensus 114 ---~~-----------------~~~----~~~~~~~l~~GvTt~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (507)
++ +.+ ...+.+++++||||++|+. .+.. .....+.+.+.......+..+.+...
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~-~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~ 159 (441)
T TIGR03314 81 PPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHH-ASPNAITGSLSTIRKAADEAGLRTMLCYETS 159 (441)
T ss_pred CCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecc-cccccccchHHHHHHHHHHhCCeEEEeeeee
Confidence 00 000 1123457899999999984 1111 11122333333332222333322221
Q ss_pred ccccCCC-cccHHHHHHHHH--cCC--cEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhh
Q 010547 169 GGLVPEN-AYNASALEALLN--AGV--LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVK 242 (507)
Q Consensus 169 ~~~~~~~-~~~~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~ 242 (507)
....... .+..+...++.+ .+. .-+...+.+ +....++++.++++.+.|++++.++++|+.+... +.....
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p---~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~~~ 236 (441)
T TIGR03314 160 DRDGGKEMQEGVEENIAFIKKSSGKEPYLVEAHIGA---HAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDSHH 236 (441)
T ss_pred cCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEec---CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHH
Confidence 1000000 111111222211 111 113333332 3345689999999999999999999999854322 111111
Q ss_pred cccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccc
Q 010547 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~ 322 (507)
..+ ..-++.+.+.+ ..+.++.+.|+.+- +.+.++.+.+.|+.+.. ||.
T Consensus 237 ~~g------------------------~~~~~~l~~~G----~l~~~~~~~H~~~~--~~~d~~~la~~g~~v~~--cP~ 284 (441)
T TIGR03314 237 KYG------------------------KDIVERLADFG----LLGSKTLAAHCIYL--SDREIELLNETDTFVVH--NPE 284 (441)
T ss_pred HcC------------------------CCHHHHHHHCC----CCCCCeEEEEEecC--CHHHHHHHHHcCCcEEE--CHH
Confidence 000 01112222221 11556777777763 33467777778876543 663
Q ss_pred cccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHH
Q 010547 323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 402 (507)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 402 (507)
. +. . ......++.++++.|+.++||||+.+.++...+. +..+.
T Consensus 285 s------n~-------~------l~~G~~p~~~~~~~Gv~v~LGtD~~~~d~~~em~------------------~a~~~ 327 (441)
T TIGR03314 285 S------NM-------G------NAVGYNPVLRMFKNGILLGLGTDGYTSDMFESLK------------------FANFK 327 (441)
T ss_pred H------Hh-------h------hccCCCCHHHHHHCCCEEEEcCCCCCcCHHHHHH------------------HHHHH
Confidence 1 11 0 0111224567888999999999986554433211 11111
Q ss_pred HHHH--hcCCCHHHHHHHHhhchhHHhC--C-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee
Q 010547 403 SYGR--KYGVTLEQLASWWSERPAKLAG--Q-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG 477 (507)
Q Consensus 403 ~~~~--~~gls~~~al~~~T~n~A~~lg--l-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (507)
.... +....+.++++++|.|+|+++| + .+.|+|++||.|||+++|.+.++..+.. ++. ..++.+.. .+
T Consensus 328 ~~~~~~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~-~~~-----~~lv~~~~-~~ 400 (441)
T TIGR03314 328 HKDAGGDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTAD-NIN-----GHILFGMN-GG 400 (441)
T ss_pred hccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechh-hcc-----ccceecCC-CC
Confidence 1111 1122357899999999999997 3 4689999999999999998877655422 110 11222222 46
Q ss_pred EEEEEEECCEEEEecCcccCCCCCcc
Q 010547 478 KVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 478 ~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
.|..|||+|++||++|+++..+..+.
T Consensus 401 ~V~~v~V~G~~v~~~~~~~~~d~~~i 426 (441)
T TIGR03314 401 SVDSTMVNGKVVMEDREFLHFDEAPI 426 (441)
T ss_pred eeEEEEECCEEEEECCcccccCHHHH
Confidence 89999999999999999987766543
No 52
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=5.3e-31 Score=259.42 Aligned_cols=360 Identities=21% Similarity=0.235 Sum_probs=223.0
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCc-EEecCCCEEecceeecccccCCCCCCCC---CChhH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQ-VVDYGEAVIMPGLIDVHAHLDDPGRTEW---EGFPS 120 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~-viD~~g~~v~PGfID~H~H~~~~~~~~~---~~~~~ 120 (507)
++|+|++|++++.....+|+|+||||++|++..+.+..+.+.+ ++|++|++|+|||||+|+|+..++.... .....
T Consensus 2 ~li~n~~v~~~~~~~~~dvlI~~gkI~~Ig~~~~~~~~~~~~~~i~d~~G~~v~PGlID~HvH~~~gg~~~~~~~~~~e~ 81 (389)
T TIGR01975 2 TLLKGAEVYAPEYIGKKDILIANDKIIAIADEIPSTKDFVPNCVVVGLEGMIAVPGFIDQHVHIIGGGGEGGPTTRTPEL 81 (389)
T ss_pred EEEECcEEEcCCcCcceeEEEECCEEEEEcCCccccccCCCCeEEECCCCCEEccCEeehhhccccccccCCCccCCHHH
Confidence 5899999999977677899999999999998765432222334 5566999999999999999865421111 12333
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc-----ccHHHHHHHHHcCCcEEE-
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA-----YNASALEALLNAGVLGLK- 194 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~- 194 (507)
.+.+++++||||++++. ++.......+.+....++...-....+... +....+. ....++.. ..-+.|++
T Consensus 82 ~~~e~l~~GvTTv~d~~-g~~~~~~~~~~~~a~~~al~~~Gir~~~~~-g~~~~p~~t~t~~~~~d~~~--~d~iiG~~~ 157 (389)
T TIGR01975 82 TLSDITKGGVTTVVGLL-GTDGITRHMESLLAKARALEEEGISCYMLT-GAYHVPSRTITGSVESDLLL--IDKVIGVGE 157 (389)
T ss_pred HHHHHHhCCcEEEecCc-ccCccccChhhHHHHHHHHHHhCCEEEEEc-ccccCCCcccccchhhheee--ehhhcccce
Confidence 57788999999999886 544444444433444444443222222211 1111110 11111110 12233443
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHhcC----Cc--EEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLARYK----RP--LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~----~~--v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
.-+.. +....++.+++.++.+.++..+ ++ +.+|.-+. ...
T Consensus 158 ia~sd---~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~-------------------------------~~~ 203 (389)
T TIGR01975 158 IAISD---HRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDS-------------------------------KRA 203 (389)
T ss_pred EEEcc---CcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc-------------------------------hhh
Confidence 22211 2224578899999999999988 88 99998432 224
Q ss_pred HHHHHHHHHhhccCCCCCCceEE---EEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCC
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLH---IVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 345 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~---~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 345 (507)
++.++++.++. ..+.| -.|+.....-.+...++.++|..+..........+. . .
T Consensus 204 l~~l~~~~~~~-------di~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~-------------~---~ 260 (389)
T TIGR01975 204 LQPIYELVENT-------DVPITQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRK-------------E---G 260 (389)
T ss_pred HHHHHHHHHhc-------CCChhheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchh-------------c---c
Confidence 56666666654 33333 335543324555555555666555443211000000 0 0
Q ss_pred ChhhHHHHHHHHhcCCe---eEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 010547 346 DAANKEKLWEALMDGHI---DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSER 422 (507)
Q Consensus 346 ~~~~~~~~~~~l~~G~~---~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n 422 (507)
.....+.+.+++++|+. ++++||...+.+..+. .|.+. ..++.++...+..+.......+++++++++++|.|
T Consensus 261 ~~~~~~~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~--~g~~~--~~g~g~~~sl~~~~~~lv~~g~ls~~eal~~~T~n 336 (389)
T TIGR01975 261 EVAPAEGIKKALEAGVPLEKVTFSSDGNGSQPFFDE--NGELT--GLGVGSFETLFEEVREAVKDGDVPLEKALRVITSN 336 (389)
T ss_pred ccChHHHHHHHHHcCCCcceEEEEeCCCCCCCcccc--ccccc--cCCcCcHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 12234456788899986 4999997532111110 11111 23555665555544444455569999999999999
Q ss_pred hhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc
Q 010547 423 PAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA 496 (507)
Q Consensus 423 ~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~ 496 (507)
||++||++++|+|++|++|||+++|.+. .+..||.+|++++++|++.
T Consensus 337 pA~~Lgl~~~G~I~~G~~ADlvild~~~---------------------------~i~~v~~~G~~v~~~g~~~ 383 (389)
T TIGR01975 337 VAGVLNLTGKGEISPGNDADLVVLDPDL---------------------------RIHSVIARGKLMVKDGKAC 383 (389)
T ss_pred HHHHhCCCCCCeECCCCcCCEEEEcCCC---------------------------CEEEEEECCEEEEECCEEE
Confidence 9999999668999999999999999651 5788999999999999986
No 53
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=100.00 E-value=8e-31 Score=263.15 Aligned_cols=361 Identities=21% Similarity=0.260 Sum_probs=214.9
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---CCCChhH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGFPS 120 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~~~~~~~ 120 (507)
.++|+|++|++++...+++|+|+||+|++|++..+.+..+.+.++||++|++|+|||||+|+|+...... ...+...
T Consensus 2 ~~~i~~~~v~~~~~~~~~~i~i~~g~I~~v~~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~t~~~ 81 (388)
T PRK10657 2 FTLLKNAHVYAPEDLGKKDILIAGGKIIAIADNINIPDIVPDIEVIDASGKILVPGFIDQHVHIIGGGGEGGFSTRTPEV 81 (388)
T ss_pred eEEEEccEEECCCCCcceEEEEECCEEEEecCCccccccCCCCeEEECCCCEEcccceeeeeCcccCCCCcccccCCHHH
Confidence 4789999999988766789999999999998764332222356899999999999999999998732111 1123456
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc-----ccHHHHHHHHHcCCcEE-E
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA-----YNASALEALLNAGVLGL-K 194 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~-~ 194 (507)
.++.++++||||+++++ +..+.....+.+....+.+...+...+...+ ....+. ...+.+. .. ....++ +
T Consensus 82 ~~~~~~~~GvTTvvd~~-~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~g~g~ 157 (388)
T PRK10657 82 QLSDLTEAGITTVVGLL-GTDGITRSMESLLAKARALEEEGISAYMYTG-SYHVPVRTITGSIRKDIV-LI-DKVIGVGE 157 (388)
T ss_pred HHHHHHhCCceEEECCC-CCCCCCCCHHHHHHHHHHHHhhCCEEEEEec-CCCCCchhhhcchhhcee-hh-hhhhCcce
Confidence 77888999999999987 4433333344444444433322222221211 111111 0001110 00 001111 1
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHhcCC------cEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKR------PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
....+ ......+.+++.++.+.++..+. ++.+|+.... ..
T Consensus 158 ~~~~~---~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~-------------------------------~~ 203 (388)
T PRK10657 158 IAISD---HRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGK-------------------------------KG 203 (388)
T ss_pred eeecc---CCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCch-------------------------------HH
Confidence 10000 11123477777777766665433 6788863211 11
Q ss_pred HHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh-
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA- 347 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 347 (507)
++.+.++..+.+. ....++..|+.......+...+..++|..+.+.. .+|+++..
T Consensus 204 l~~v~~~l~~~Gv----~~~~~~~~H~~~~~~~~~~~~~~~~~G~~~~v~~--------------------~~~~~~~~~ 259 (388)
T PRK10657 204 LQPLFELLENTDI----PISQFLPTHVNRNEPLFEQALEFAKKGGVIDLTT--------------------SDPDFLGEG 259 (388)
T ss_pred HHHHHHHHHhcCC----CcceeeCcccCCCHHHHHHHHHHHHcCCeEEEec--------------------CCCcccccC
Confidence 2222222222110 0123455665532133344555555565443321 12222222
Q ss_pred --hhHHHHHHHHhcCC---eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 010547 348 --ANKEKLWEALMDGH---IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSER 422 (507)
Q Consensus 348 --~~~~~~~~~l~~G~---~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n 422 (507)
...+.+++++++|. .++++||+...... ....|.+ .+.+..++...+..+.......++|++++++++|.|
T Consensus 260 ~~~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~--~~~~g~~--~~~g~~~~~~l~~~~~~~~~~~gis~~~~l~~aT~n 335 (388)
T PRK10657 260 EVAPAEALKRALEAGVPLSRVTLSSDGNGSLPK--FDEDGNL--VGLGVGSVESLLEEVRELVKDEGLPLEDALKPLTSN 335 (388)
T ss_pred ccCHHHHHHHHHHcCCChhheEEECCCCCCCce--eccCCCE--eccCcCchhhHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 34577889999998 67999997543321 1111212 234556666666666655567899999999999999
Q ss_pred hhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC
Q 010547 423 PAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 423 ~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
||+++|++++|+|++|+.|||+++| ++ . .|..||++|++|+++|+++.
T Consensus 336 pA~~lg~~~~G~l~~G~~AD~vv~~-~~--------~------------------~~~~~~~~G~~v~~~~~~~~ 383 (388)
T PRK10657 336 VARFLKLNGKGEILPGKDADLLVLD-DD--------L------------------RIEQVIAKGKLMVKDGKALV 383 (388)
T ss_pred HHHHhCCCCCCccCCCCccCEEEEC-CC--------C------------------CEEEEEECCEEEEECCEEec
Confidence 9999999448999999999999999 32 0 58999999999999999865
No 54
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=100.00 E-value=9.2e-32 Score=263.31 Aligned_cols=321 Identities=18% Similarity=0.211 Sum_probs=243.9
Q ss_pred ecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc-eeeEEEeccccCCC
Q 010547 97 MPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGLVPEN 175 (507)
Q Consensus 97 ~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 175 (507)
+||+||+|+|+..+ +++....+.|.++| |++++++ ++.|.....+.+......+.... +.++..++++....
T Consensus 3 ~Pg~iD~h~h~~~~-----~~~~~~~~aa~~gG-Ttvv~mp-nt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 75 (335)
T cd01294 3 IPRPDDMHLHLRDG-----AMLKLVLPYTARGF-SRAIVMP-NLKPPVTTTADALAYRERILAADPGPNFTPLMTLYLTE 75 (335)
T ss_pred CCCcceeEecCCCc-----hHHHHHHHHHHhCC-CEEEECC-CCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEEEEeccC
Confidence 79999999999874 67889999999999 9999999 77777777776666665555544 45666555553233
Q ss_pred cccHHHHHHHHHc-CCcEEEEcccCCCC-CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcccc
Q 010547 176 AYNASALEALLNA-GVLGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253 (507)
Q Consensus 176 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~ 253 (507)
....++++++.+. |+.++|.|+..... .+....+.+.+..+++.+++.|.++.+|+++.....
T Consensus 76 ~~~~~el~~~~~~~G~~g~Klf~~~~~~~~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~--------------- 140 (335)
T cd01294 76 NTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKI--------------- 140 (335)
T ss_pred CCCHHHHHHHHHhCCceEEEEecCCCccCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCcccc---------------
Confidence 3346788888876 99999998632111 112233568899999999999999999998754311
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC
Q 010547 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333 (507)
Q Consensus 254 ~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~ 333 (507)
.+...+.+.+.+...++++ .++.++|+.|+++. ++++.++.+++ ++++++||||+.++.+.+..
T Consensus 141 ------~~~~~e~~~~~~~~~lA~~------~p~~~v~i~Hvst~-~~~~~i~~ak~---~vt~Et~ph~L~l~~~~~~~ 204 (335)
T cd01294 141 ------DVLDREAKFIPVLEPLAQR------FPKLKIVLEHITTA-DAVEYVKSCNE---NVAATITPHHLLLTRDDLLG 204 (335)
T ss_pred ------cchhhHHHHHHHHHHHHHH------cCCCeEEEecccHH-HHHHHHHhCCC---CcEEEEchhHheeeHHHhcC
Confidence 0111233445667777775 34889999999998 99999987765 78999999999999998865
Q ss_pred --CCCceeEcCCCCChhhHHHHHHHHhcCCee-EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCC
Q 010547 334 --GDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV 410 (507)
Q Consensus 334 --~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~-~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gl 410 (507)
.+..++++||+|...+++.+++++.+|.++ +++|||+|+...+|. .++. ..|+.+++..++.++.... .++
T Consensus 205 ~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~---~~~g--~~Gi~~~~~~l~~~~~~~~-~~l 278 (335)
T cd01294 205 GGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKE---SSCG--CAGIFSAPIALPYLAEVFE-EHN 278 (335)
T ss_pred CCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCcccc---CCCC--CccccCHHHHHHHHHHHHh-ccC
Confidence 588999999999999999999999999999 599999999877663 1222 2366666667777764444 589
Q ss_pred CHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCc
Q 010547 411 TLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGR 473 (507)
Q Consensus 411 s~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (507)
++++++++.+.|||++||+ +.+|+ |++++ ..|.++.. .+.++.. ++||+|-
T Consensus 279 ~l~~~v~~~s~nPA~i~gl~~~kg~--------i~~~~--~~~~v~~~-~~~s~~~-~sp~~g~ 330 (335)
T cd01294 279 ALDKLEAFASDNGPNFYGLPPNKKT--------ITLVK--EPWKVPEK-IPFGNNG-VVPFRAG 330 (335)
T ss_pred CHHHHHHHHHhHHHHHhCCCCCCCe--------EEEEe--eceEcCch-hccCCCc-eecccCC
Confidence 9999999999999999999 65555 55554 66777766 7778888 8888864
No 55
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=2.6e-31 Score=270.48 Aligned_cols=380 Identities=17% Similarity=0.170 Sum_probs=217.4
Q ss_pred ceEEEEecE-EECCCC----ceee-eEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC--
Q 010547 43 NQYWLTSKR-IVTPKG----VISG-AVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-- 114 (507)
Q Consensus 43 ~~~~i~n~~-i~~~~~----~~~~-~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~-- 114 (507)
.+++|+|++ |++.+. +.++ +|+|+||+|++|++... ++++++||++|++|+|||||+|+|+.......
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~----~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg~~ 77 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGALTP----LPGERVIDATDCVVYPGWVNTHHHLFQSLLKGVP 77 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEeccCC----CCCCeEEeCCCCEEecCEeecccCcccccccccc
Confidence 568999996 677543 3454 89999999999998321 13679999999999999999999998531110
Q ss_pred ---------C--------CC----------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEE
Q 010547 115 ---------W--------EG----------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 167 (507)
Q Consensus 115 ---------~--------~~----------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (507)
| +. ....+.+++++||||+.|+. .........+......++....+...+..
T Consensus 78 ~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~~~~~a~~~~G~R~~~~ 156 (457)
T PRK12393 78 AGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHH-YLYHPGMPFDTGDILFDEAEALGMRFVLC 156 (457)
T ss_pred cccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecch-hhcccccccchHHHHHHHHHHcCCeEEEE
Confidence 0 00 12234567899999999874 11111122233333444343222211111
Q ss_pred ecccc------CC-----Cc----ccHHHHHHHHHc--C--CcE-EEEcccCCCCCCC-CCCCHHHHHHHHHHHHhcCCc
Q 010547 168 WGGLV------PE-----NA----YNASALEALLNA--G--VLG-LKSFMCPSGINDF-PMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 168 ~~~~~------~~-----~~----~~~~~~~~~~~~--g--~~~-~~~~~~~~~~~~~-~~~~~~~l~~~~~~a~~~~~~ 226 (507)
..... .. .. ...+..+++.+. + ..+ +...+.+ ... ..++++.++++.+.|++++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e~l~~~~~~a~~~g~~ 233 (457)
T PRK12393 157 RGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAP---TTPTFSLPPELLREVARAARGMGLR 233 (457)
T ss_pred ccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcC---CCCCCCcCHHHHHHHHHHHHHcCCe
Confidence 11110 00 00 111222333221 1 101 1111221 111 357889999999999999999
Q ss_pred EEEecCCccc-chhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHH
Q 010547 227 LLVHAEMEKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLL 305 (507)
Q Consensus 227 v~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i 305 (507)
+.+|+.+... ++...... + .+-.+.+.+. +. .+.++.+.|+..- +.+.+
T Consensus 234 ~~~H~~e~~~~~~~~~~~~----------------g--------~~~~~~l~~~--g~--l~~~~~~~H~~~l--~~~d~ 283 (457)
T PRK12393 234 LHSHLSETVDYVDFCREKY----------------G--------MTPVQFVAEH--DW--LGPDVWFAHLVKL--DAEEI 283 (457)
T ss_pred EEEEeCCCHHHHHHHHHHh----------------C--------CCHHHHHHHc--CC--CCCCeEEEEEecC--CHHHH
Confidence 9999854221 11000000 0 0001111211 01 1445667777652 34466
Q ss_pred HHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCcc
Q 010547 306 MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFL 385 (507)
Q Consensus 306 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~ 385 (507)
+.+++.|+.+. +||..... .+ ....++.++++.|+.+++|||+.+.+...++
T Consensus 284 ~~la~~g~~v~--~~P~sn~~-------lg------------~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~------- 335 (457)
T PRK12393 284 ALLAQTGTGIA--HCPQSNGR-------LG------------SGIAPALAMEAAGVPVSLGVDGAASNESADM------- 335 (457)
T ss_pred HHHHHcCCeEE--ECchhhhh-------hc------------ccCCCHHHHHHCCCeEEEecCCcccCCCccH-------
Confidence 77777787654 46631100 00 1123456788899999999997654321111
Q ss_pred ccCCCCchhhhHH-HHHHHHH--HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCccc
Q 010547 386 KAWGGISSLQFVL-PVTWSYG--RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHM 462 (507)
Q Consensus 386 ~~~~~~~~~~~~l-~~~~~~~--~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~ 462 (507)
++... ..+.... ....++++++++++|.|||+++|++++|+|++|+.|||+++|.+.++..+..
T Consensus 336 --------~~~~~~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~----- 402 (457)
T PRK12393 336 --------LSEAHAAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLDAIGTLAVGQAADLAIYDLDDPRFFGLH----- 402 (457)
T ss_pred --------HHHHHHHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCCCCCCcCCCCcCCEEEEeCCCcccCCCC-----
Confidence 11101 1111111 0124899999999999999999995589999999999999998875543221
Q ss_pred CCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 463 KHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 463 ~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
++...++... ..+.|..|||+|+++|++|+++..+.+..
T Consensus 403 -~~~~~~~~~~-~~~~v~~v~v~G~~v~~~~~~~~~d~~~i 441 (457)
T PRK12393 403 -DPAIAPVACG-GPAPVKALLVNGRPVVENGAIPGLDLAEL 441 (457)
T ss_pred -CchhhhhccC-CCCCeeEEEECCEEEEECCccCCCCHHHH
Confidence 1101122221 23579999999999999999987765543
No 56
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.1e-30 Score=261.84 Aligned_cols=358 Identities=21% Similarity=0.266 Sum_probs=225.7
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCC-------CCCCCcEEecCCCEEecceeecccccCCCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPR-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE 114 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~-------~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~ 114 (507)
..+++|+|++|+++.++..++|.|+||||++|++...+.. ...+.++||++|++|+|||||+|+|+..+..
T Consensus 66 ~mDlVI~Na~Vvd~~gi~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~P~~-- 143 (568)
T PRK13207 66 AVDTVITNALILDHWGIVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFICPQQ-- 143 (568)
T ss_pred cCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCccccH--
Confidence 4679999999999877788999999999999997532210 0125789999999999999999999876432
Q ss_pred CCChhHHHHHHHhCCceEEEeCCCCC----CCCCCC--HHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPLNS----DPSTIS--TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~~~----~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
.+.++++||||+++++.+. .+.... ...+....+..+ ...+++.+++.. .....+.+.++.+.
T Consensus 144 -------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~-~~pin~g~~g~g---~~~~~~~L~e~i~a 212 (568)
T PRK13207 144 -------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAAD-AFPMNIGFLGKG---NASLPEALEEQIEA 212 (568)
T ss_pred -------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhh-cCCceEEEEcCC---CcccHHHHHHHHHc
Confidence 4788999999999974211 122111 233444444444 345667665422 23456788888999
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
|+.++|.+..+ ..+++.+.++++.|++++.++.+|++.... ...
T Consensus 213 GA~gfKi~~d~-------g~t~~~l~~aL~~A~~~gv~V~iHa~tlne-----------------------------~G~ 256 (568)
T PRK13207 213 GAIGLKLHEDW-------GATPAAIDNCLSVADEYDVQVAIHTDTLNE-----------------------------SGF 256 (568)
T ss_pred CCCEEeecCCC-------CCCHHHHHHHHHHHHHhCCEEEEeCCCccc-----------------------------chH
Confidence 99999986422 358899999999999999999999965432 111
Q ss_pred HHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCC
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 346 (507)
++..+.... +..+|..|...+. -..+.++.+...++-.+ .+.| ...++.+.+...-...+.+..+..
T Consensus 257 ~e~t~~a~~---------g~~iH~~H~egaggghapdii~~~~~~~v~p~-st~p-t~p~~~~~~~e~~~m~m~~h~l~~ 325 (568)
T PRK13207 257 VEDTIAAFK---------GRTIHTFHTEGAGGGHAPDIIKVAGEPNVLPS-STNP-TRPYTVNTIDEHLDMLMVCHHLDP 325 (568)
T ss_pred HHHHHHhcC---------CCEEEEEeecCCCcCCchHHHHHhhcCCCccC-CCCC-CCCCccCchhhhcCeEEeecCCCC
Confidence 233444433 7789999987321 23455566655554322 2222 233344444333223333322210
Q ss_pred --hhhHH---------HH---HHHHhcCCeeEEeCCCCCCCh-hhhccccCCccccCCCCchhhhHHHHHHHHHHhcC-C
Q 010547 347 --AANKE---------KL---WEALMDGHIDMLSSDHSPTVP-ELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-V 410 (507)
Q Consensus 347 --~~~~~---------~~---~~~l~~G~~~~lgtD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g-l 410 (507)
+++.. .+ --+...|+..+++||+..... .. ..+.. +..........| +
T Consensus 326 ~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~---------------~~~r~-~q~A~~r~~~~G~~ 389 (568)
T PRK13207 326 SIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGE---------------VIIRT-WQTAHKMKVQRGPL 389 (568)
T ss_pred CCcchhhhhhhhccceeecccchhhhCCCEEEecCCccccccccc---------------chhHH-HHHHHHHHHccCCC
Confidence 11110 01 113556999999999764311 00 00000 000000000111 1
Q ss_pred -------CHHHH---HHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEE
Q 010547 411 -------TLEQL---ASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKV 479 (507)
Q Consensus 411 -------s~~~a---l~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 479 (507)
+.+.+ ++++|.|||+++|+ +.+|+|++||.||||+|+.+. +.. .+
T Consensus 390 ~~d~~~~~n~ri~~~l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~----------f~~--------------~~ 445 (568)
T PRK13207 390 PGDSGRNDNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAF----------FGV--------------KP 445 (568)
T ss_pred CcccccCccchHHHHHHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchh----------cCC--------------Cc
Confidence 11222 99999999999999 668999999999999999542 111 36
Q ss_pred EEEEECCEEEEec-CcccCCC
Q 010547 480 LATISRGNLVYKE-GNHAPAA 499 (507)
Q Consensus 480 ~~v~v~G~~v~~~-g~~~~~~ 499 (507)
..||++|+++|.. |....+.
T Consensus 446 ~~ti~~G~iv~~~~gd~~as~ 466 (568)
T PRK13207 446 ELVLKGGMIAWAPMGDPNASI 466 (568)
T ss_pred eEEEECCEEEEecCCCccccC
Confidence 7899999999987 7665433
No 57
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.7e-31 Score=269.93 Aligned_cols=366 Identities=16% Similarity=0.134 Sum_probs=214.3
Q ss_pred eEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC------C-
Q 010547 44 QYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------E- 114 (507)
Q Consensus 44 ~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~------~- 114 (507)
+++|+|++|++++. ..+++|+|+||+|++|++....+ +.++||+.|++|+|||||+|+|+...... +
T Consensus 2 ~~~i~~~~i~~~~~~~~~~~~i~i~~g~I~~v~~~~~~~----~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~~~~l 77 (424)
T PRK08393 2 SILIKNGYVIYGENLKVIRADVLIEGNKIVEVKRNINKP----ADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVPL 77 (424)
T ss_pred eEEEECcEEEeCCCCceecceEEEECCEEEEecCCCCCC----CCeEEeCCCCEEccCeeeeccCcchHhhhhccCCCCH
Confidence 58999999999887 34789999999999998754322 46799999999999999999998642110 0
Q ss_pred --C--------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC
Q 010547 115 --W--------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE 174 (507)
Q Consensus 115 --~--------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (507)
| +. ....+.+++++||||+.++. . ..+...+.......+..+.+.... ...
T Consensus 78 ~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~------~~~~~~~a~~~~G~r~~~~~~~~~--~~~ 148 (424)
T PRK08393 78 MEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-F------HMEEVAKATLEVGLRGYLSYGMVD--LGD 148 (424)
T ss_pred HHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-c------CHHHHHHHHHHhCCeEEEeceEec--CCC
Confidence 0 01 11234567899999999874 1 122232222222222222211110 011
Q ss_pred CcccHHHHHH---HHH----cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccC
Q 010547 175 NAYNASALEA---LLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDD 246 (507)
Q Consensus 175 ~~~~~~~~~~---~~~----~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~ 246 (507)
+....+.+++ ..+ .+...+...+.+ .....++++.++++++.|++++.++.+|+.+... +.......+
T Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p---~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g- 224 (424)
T PRK08393 149 EEKREKEIKETEKLMEFIEKLNSPRVHFVFGP---HAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYG- 224 (424)
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCceEEEEeC---CcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhC-
Confidence 1111122221 111 122112221211 2223578999999999999999999999854321 110000000
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccc
Q 010547 247 TLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF 326 (507)
Q Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~ 326 (507)
..-.+.+.+.+ ..+.++.+.|+... +.+.++.+++.|+.+. +||..-..
T Consensus 225 -----------------------~~~~~~l~~~G----~l~~~~~~~H~~~l--~~~~l~~la~~g~~v~--~~P~sn~~ 273 (424)
T PRK08393 225 -----------------------KSPVVLLDEIG----FLNEDVIAAHGVWL--SSRDIRILASAGVTVA--HNPASNMK 273 (424)
T ss_pred -----------------------cCHHHHHHHcC----CCCCCcEEEEeecC--CHHHHHHHHhcCCEEE--ECHHHHHh
Confidence 00112222211 01455666776652 3356777778886554 46631000
Q ss_pred cccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH-HHHHHHHH
Q 010547 327 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYG 405 (507)
Q Consensus 327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~ 405 (507)
+ + ....++.++++.|+.+++|||...++...++ ++.. +.......
T Consensus 274 ----l---g------------~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~---------------~~~~~~a~~~~~~ 319 (424)
T PRK08393 274 ----L---G------------SGVMPLRKLLNAGVNVALGTDGAASNNNLDM---------------LREMKLAALLHKV 319 (424)
T ss_pred ----h---c------------cCCCCHHHHHHCCCcEEEecCCCccCCchhH---------------HHHHHHHHHHHhh
Confidence 0 0 1122456778899999999997643221111 1110 11111111
Q ss_pred Hh---cCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE---eeEE
Q 010547 406 RK---YGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL---SGKV 479 (507)
Q Consensus 406 ~~---~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~V 479 (507)
.. ..++++++++++|.|||+++|++ .|+|++||+||||++|.+.+...+. .+|+..+.. .+.|
T Consensus 320 ~~~~~~~~~~~~al~~aT~~~A~~lg~~-~G~l~~G~~ADlvvld~~~~~~~~~----------~~~~~~~~~~~~~~~v 388 (424)
T PRK08393 320 HNLDPTIADAETVFRMATQNGAKALGLK-AGVIKEGYLADIAVIDFNRPHLRPI----------NNPISHLVYSANGNDV 388 (424)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHHHhCCC-CCccCCCCccCEEEEeCCCCCcCCC----------CChHHHeeeeCCCCCe
Confidence 11 12578999999999999999995 6999999999999999886543322 222322222 2579
Q ss_pred EEEEECCEEEEecCcccCCCCCc
Q 010547 480 LATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 480 ~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
..|||+|+++|++|+++..+...
T Consensus 389 ~~v~v~G~~v~~~g~~~~~d~~~ 411 (424)
T PRK08393 389 ETTIVDGKIVMLDGEVLTLDEEK 411 (424)
T ss_pred eEEEECCEEEEECCeECCCCHHH
Confidence 99999999999999998765543
No 58
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=2.9e-31 Score=268.49 Aligned_cols=367 Identities=14% Similarity=0.102 Sum_probs=214.3
Q ss_pred ceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC------C
Q 010547 43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------E 114 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~------~ 114 (507)
.+++|+|++|+++++ +.+++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+...... +
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~~~~~ 77 (430)
T PRK06038 2 ADIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTPG----DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYADDLP 77 (430)
T ss_pred CCEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCCC----CCCEEEeCCCCEEecCeeecccCcchhhhhhccCCCC
Confidence 357999999998764 4578999999999999986432 246899999999999999999999753111 0
Q ss_pred ---C--------------CCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC
Q 010547 115 ---W--------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP 173 (507)
Q Consensus 115 ---~--------------~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (507)
| +.. ...+.+++++||||+.|+. . ......+..+....+. +..++....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~------~~~~~~~a~~~~GiR~---~~~~~~~d~ 147 (430)
T PRK06038 78 LAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMY-F------YMDEVAKAVEESGLRA---ALSYGMIDL 147 (430)
T ss_pred HHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccc-c------CHHHHHHHHHHhCCeE---EEEchhccC
Confidence 0 000 1224567899999999874 1 1122222222121111 111111111
Q ss_pred CC-cc---cHHHHHHHHH--cC--CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhccc
Q 010547 174 EN-AY---NASALEALLN--AG--VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (507)
Q Consensus 174 ~~-~~---~~~~~~~~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 245 (507)
.. .. ..+...++.+ .+ ...+...+.+ .....++++.++++++.|++++.++.+|+.+.......+...
T Consensus 148 ~~~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~---~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~- 223 (430)
T PRK06038 148 GDDEKGEAELKEGKRFVKEWHGAADGRIKVMYGP---HAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQ- 223 (430)
T ss_pred CCccchHHHHHHHHHHHHHhcCCCCCceEEEEeC---CcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHH-
Confidence 11 11 1112222221 11 1122222222 333467899999999999999999999996543211110000
Q ss_pred CcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccc
Q 010547 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325 (507)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~ 325 (507)
.-...++...+.+ ..+.++.+.|+..- ..+.++.+++.|+.+.. ||....
T Consensus 224 ----------------------~G~~~i~~l~~~g----~l~~r~~~~H~~~l--~~~~~~~la~~g~~v~~--~P~~n~ 273 (430)
T PRK06038 224 ----------------------YGMCSVNYLDDIG----FLGPDVLAAHCVWL--SDGDIEILRERGVNVSH--NPVSNM 273 (430)
T ss_pred ----------------------hCCCHHHHHHHcC----CCCCCeEEEEEecC--CHHHHHHHHhcCCEEEE--ChHHhh
Confidence 0001122222221 11455666777653 23357777788876543 563211
Q ss_pred ccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH-HHHHHHH
Q 010547 326 FSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSY 404 (507)
Q Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~ 404 (507)
. ......++.++++.|+.+++|||+.+.....++ ++.. +......
T Consensus 274 ~-------------------~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~---------------~~~~~~a~~~~~ 319 (430)
T PRK06038 274 K-------------------LASGIAPVPKLLERGVNVSLGTDGCASNNNLDM---------------FEEMKTAALLHK 319 (430)
T ss_pred h-------------------hccCCCCHHHHHHCCCeEEEeCCCCccCCCcCH---------------HHHHHHHHHHhh
Confidence 0 001122456888899999999996543221111 1110 1111111
Q ss_pred H---HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE---eeE
Q 010547 405 G---RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL---SGK 478 (507)
Q Consensus 405 ~---~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 478 (507)
. ...+++++++++++|.|||++||++ .|+|++|+.||||++|.+.+...+. .+++..+.. ...
T Consensus 320 ~~~~~~~~~~~~~al~~aT~~gA~~lg~~-~G~l~~G~~ADlvvld~~~~~~~p~----------~~~~~~~v~~~~~~~ 388 (430)
T PRK06038 320 VNTMDPTALPARQVLEMATVNGAKALGIN-TGMLKEGYLADIIIVDMNKPHLTPV----------RDVPSHLVYSASGSD 388 (430)
T ss_pred hccCCCCcCCHHHHHHHHhHHHHHHhCCC-CCccCCCcccCEEEEeCCCCccCCC----------CChHHheeEeCCCCc
Confidence 1 1246899999999999999999995 6999999999999999886432211 122222221 236
Q ss_pred EEEEEECCEEEEecCcccCCCCCc
Q 010547 479 VLATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 479 V~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
|..|||+|+++|++|++++.+..+
T Consensus 389 v~~v~v~G~~v~~~g~~~~~d~~~ 412 (430)
T PRK06038 389 VDTTIVDGRILMEDYKVLCMDEQD 412 (430)
T ss_pred eeEEEECCEEEEECCeECCCCHHH
Confidence 999999999999999998765443
No 59
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=1.1e-30 Score=263.86 Aligned_cols=356 Identities=18% Similarity=0.139 Sum_probs=201.1
Q ss_pred eeeeEEEeCCEEEEeecCCCCCCCCC-CCcEEecCCCEEecceeecccccCCCCCCC--------C--------------
Q 010547 59 ISGAVEIKEGNIISIVSEEDWPRNSK-TGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--------W-------------- 115 (507)
Q Consensus 59 ~~~~I~I~dG~I~~Vg~~~~~~~~~~-~~~viD~~g~~v~PGfID~H~H~~~~~~~~--------~-------------- 115 (507)
.+++|+|+||+|++||+..+.....+ +.++||++|++|+|||||+|+|+....... |
T Consensus 30 ~~g~I~I~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~lv~PGlVn~H~H~~~~~~~g~~~~~l~~wl~~~~~~~e~~~~~ 109 (433)
T PRK09228 30 EDGLLLVEDGRIVAAGPYAELRAQLPADAEVTDYRGKLILPGFIDTHIHYPQTDMIASYGEQLLDWLNTYTFPEERRFAD 109 (433)
T ss_pred CCeEEEEECCEEEEEcChHHhhhhcCCCCeEEeCCCCEEecceecccccccchhhccCCchHHHHHHHhhhhHHHHHhCC
Confidence 48899999999999998654322111 368999999999999999999986532110 0
Q ss_pred -CCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc---CceeeEEEecc-cc----CCCcccH---
Q 010547 116 -EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGFWGG-LV----PENAYNA--- 179 (507)
Q Consensus 116 -~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~----~~~~~~~--- 179 (507)
+.. ...+.+++++||||++++. .. .........++... +.......... .. .......
T Consensus 110 ~~~~~~~a~~~~~e~l~~G~Ttv~d~~-~~-----~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~l~~~ 183 (433)
T PRK09228 110 PAYAREVAEFFLDELLRNGTTTALVFG-TV-----HPQSVDALFEAAEARNMRMIAGKVLMDRNAPDGLRDTAESGYDDS 183 (433)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEecc-cc-----CHHHHHHHHHHHHHcCCeEEeeeeeecCCCCcccccCHHHHHHHH
Confidence 001 1123457899999999874 11 12222333333322 22221111110 00 0011111
Q ss_pred -HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEecCCccc-chhhhhcccCcCCccccccc
Q 010547 180 -SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKG-SERHVKLEDDTLDTRSYSTY 256 (507)
Q Consensus 180 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (507)
+.++++...+...+. +.+ ...+.++++.++++.+.|+++ +.++++|..+... ........+
T Consensus 184 ~~~~~~~~~~~~~~~~--~~p---~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e~~~~~~~~g----------- 247 (433)
T PRK09228 184 KALIERWHGKGRLLYA--ITP---RFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLDEIAWVKELFP----------- 247 (433)
T ss_pred HHHHHHHhCCCCceEE--EEC---CcCCcCCHHHHHHHHHHHHHCCCCceEEeecCChhHHHHHHHHcC-----------
Confidence 122232222332222 222 333567899999999999998 9999999854332 111100000
Q ss_pred cCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCC
Q 010547 257 LKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDT 336 (507)
Q Consensus 257 ~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 336 (507)
..+ ...+.+.+.+ ..+.++.+.|+... ..+.++.+++.|+.+. +||..-.. .
T Consensus 248 --~~~---------~~~~~l~~~G----~l~~~~~~~H~~~l--~~~~~~~la~~g~~v~--~~P~sn~~------l--- 299 (433)
T PRK09228 248 --EAR---------DYLDVYERYG----LLGPRAVFAHCIHL--EDRERRRLAETGAAIA--FCPTSNLF------L--- 299 (433)
T ss_pred --CCC---------CHHHHHHHcC----CCCCCeEEEeccCC--CHHHHHHHHHcCCeEE--ECCccHHh------h---
Confidence 000 0122222221 11567888888873 3456777777887554 46642110 0
Q ss_pred ceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh-HHHHHHHHHHhcCCCHHHH
Q 010547 337 RFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPVTWSYGRKYGVTLEQL 415 (507)
Q Consensus 337 ~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~gls~~~a 415 (507)
.....++.++++.|+++++|||..+.+... .++. .+..........+++++++
T Consensus 300 ----------g~g~~~~~~~~~~Gv~v~lGtD~~~~~~~d----------------~~~~~~~~~~~~~~~~~~~~~~~~ 353 (433)
T PRK09228 300 ----------GSGLFDLKRADAAGVRVGLGTDVGGGTSFS----------------MLQTMNEAYKVQQLQGYRLSPFQA 353 (433)
T ss_pred ----------cCCCcCHHHHHHCCCeEEEecCCCCCCCCC----------------HHHHHHHHHHHhhcccCCCCHHHH
Confidence 011224567788899999999975322111 0110 0111111122356899999
Q ss_pred HHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE---eeEEEEEEECCEEEEe
Q 010547 416 ASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL---SGKVLATISRGNLVYK 491 (507)
Q Consensus 416 l~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~V~~v~v~G~~v~~ 491 (507)
++++|.|||+++|+ +++|+|++||+||||++|.+..+...+. ....... .+|+..+.. ...|+.|||+|++||+
T Consensus 354 l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv~d~~~~~~~~~~-~~~~~~~-~d~~~~lv~~~~~~~V~~v~VdG~~v~~ 431 (433)
T PRK09228 354 FYLATLGGARALGLDDRIGNLAPGKEADFVVLDPAATPLLALR-TARAESL-EELLFALMTLGDDRAVAETYVAGRPVYR 431 (433)
T ss_pred HHHHhHHHHHHhCCCCCCcccCCCCCCCEEEEcCCCCccccch-hcccCCH-HHHHHHHhhcCCccceeEEEECCEEecc
Confidence 99999999999999 5689999999999999998753321100 0000001 233433333 3569999999999986
Q ss_pred c
Q 010547 492 E 492 (507)
Q Consensus 492 ~ 492 (507)
+
T Consensus 432 ~ 432 (433)
T PRK09228 432 R 432 (433)
T ss_pred C
Confidence 4
No 60
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=100.00 E-value=4.7e-30 Score=262.84 Aligned_cols=323 Identities=20% Similarity=0.227 Sum_probs=220.4
Q ss_pred eEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 44 QYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
+++|+|++|+++.. +..++|+|+||+|++|++.. +.++||++|++|+|||||+|+|+..+... ....
T Consensus 1 dlli~n~~ivd~~~~~~~~~dI~I~~g~I~~ig~~~-------~~~viDa~G~~v~PG~ID~H~Hi~~~~~~----~~~~ 69 (552)
T TIGR01178 1 DIVIKNAKIIDVYNGEIIPGDIAIANGHIAGVGKYN-------GVKVIDALGEYAVPGFIDAHIHIESSMLT----PSEF 69 (552)
T ss_pred CEEEEeeEEEeCCCCcEEeeeEEEECCEEEEecCCC-------CCeEEECCCCEEEeCeEecccccCCCCCC----hhHH
Confidence 47899999998643 56789999999999998641 46899999999999999999999875443 2234
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc-C-----CCcc--cHHHHHHHHH-cCCcE
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-P-----ENAY--NASALEALLN-AGVLG 192 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~--~~~~~~~~~~-~g~~~ 192 (507)
.+.++.+||||+++.| ++.|.....+.+....+.++ ..++++....... + .... ..++++++.+ .|+.+
T Consensus 70 ~~~al~~GvTtvv~~P-~~~~~v~g~~~~~~~~~~a~-~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~V~g 147 (552)
T TIGR01178 70 AKLVLPHGVTTVVSDP-HEIANVNGEDGINFMLNNAK-KTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDEVLG 147 (552)
T ss_pred HHHHHCCCEEEEEcCC-CCCCCCCCHHHHHHHHHHhh-cCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCCccE
Confidence 5678999999999998 66677778888888877666 5567765544321 1 1111 4677888876 49999
Q ss_pred EEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHH
Q 010547 193 LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIREL 272 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 272 (507)
++.++.+++ . ...++.+.+.++.+++.+..+..|++.... ..+...
T Consensus 148 lke~m~~~~---v-~~~d~~~l~~i~~a~~~g~~I~gHap~l~~------------------------------~eL~~~ 193 (552)
T TIGR01178 148 LAEVMDYPG---V-INADIEMLNKINSARKRNKVIDGHCPGLSG------------------------------KLLNKY 193 (552)
T ss_pred EEEEecchh---h-cCCCHHHHHHHHHHHhCCCEEEecCCCCCH------------------------------HHHHHH
Confidence 999986532 1 234555555558899999999999964321 111222
Q ss_pred HHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHH
Q 010547 273 LTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEK 352 (507)
Q Consensus 273 ~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 352 (507)
... |. ...|.. .+.+...+..++|..+..-.. + ...+...
T Consensus 194 ---~~a--------Gi--~~dHe~---~s~~ea~e~~~~Gm~~~ir~g---------------s---------~~~n~~~ 233 (552)
T TIGR01178 194 ---ISA--------GI--SNDHES---TSIEEAREKLRLGMKLMIREG---------------S---------AAKNLEA 233 (552)
T ss_pred ---HHc--------CC--CCCcCc---CCHHHHHHHHHCCCEEEEeCC---------------c---------cccCHHH
Confidence 111 32 245543 335566666677765543110 0 0111122
Q ss_pred HHHHH--hcCCeeEEeCCCC-CCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 353 LWEAL--MDGHIDMLSSDHS-PTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 353 ~~~~l--~~G~~~~lgtD~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
+..++ ..+.+++++||.. +.+... .| .+....+.+.+.|+++++|++++|.|||+++|+
T Consensus 234 ~~~~~~~~~~~~~~l~TD~~~~~~~~~----~g--------------~l~~~v~~ai~~g~~~~~Al~maT~npA~~lgl 295 (552)
T TIGR01178 234 LHPLINEKNCRSLMLCTDDRHVNDILN----EG--------------HINHIVRRAIEHGVDPFDALQMASINPAEHFGI 295 (552)
T ss_pred HHHHHhhcCCceEEEEeCCCChhHHHh----cC--------------CHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 22222 2467899999942 111111 01 144455566677999999999999999999999
Q ss_pred CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec-----Cccc
Q 010547 430 VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE-----GNHA 496 (507)
Q Consensus 430 ~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~-----g~~~ 496 (507)
++.|+|++|+.|||+++|... .. .+..||++|++|.++ |+.+
T Consensus 296 ~~~G~I~pG~~ADlvvl~~l~-------------~~------------~v~~v~~~G~~v~~~~~~~~g~~~ 342 (552)
T TIGR01178 296 DVGGLIAPGDPADFVILKDLR-------------NF------------KVNKTYVKGKLLDLNEVFNDEISR 342 (552)
T ss_pred CCCcccCCCCcCCEEEECCCC-------------Cc------------eEEEEEECCEEEcccccccCCccc
Confidence 668999999999999999311 11 689999999999997 7754
No 61
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=100.00 E-value=7.7e-30 Score=255.81 Aligned_cols=357 Identities=17% Similarity=0.221 Sum_probs=213.9
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---CCCChhHH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGFPSG 121 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~~~~~~~~ 121 (507)
++|+|++|++++...+++|+|+||+|++|++....+. ..+.++||++|++|+|||||+|+|+..+... ...+....
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~v~~~~~~~~-~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~ 80 (387)
T cd01308 2 TLIKNAEVYAPEYLGKKDILIAGGKILAIEDQLNLPG-YENVTVVDLHGKILVPGFIDQHVHIIGGGGEGGPSTRTPEVT 80 (387)
T ss_pred EEEECcEEeCCCCccceEEEEECCEEEEEeCCccccc-CCCCeEEECCCCEEccCeeehhhCcccccCCCcccccCHHHH
Confidence 5799999999877778899999999999998754331 2357899999999999999999998653211 11223344
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc---c----cHHHHHHHHHcCCcEEE
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA---Y----NASALEALLNAGVLGLK 194 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~g~~~~~ 194 (507)
...++++|+||+++++ ++.+.....+.+....+.+...+...+...+....... + ....++.+...|..++.
T Consensus 81 ~~~~~~~G~tt~~d~~-~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~ 159 (387)
T cd01308 81 LSDLTTAGVTTVVGCL-GTDGISRSMEDLLAKARALEEEGITCFVYTGSYEVPTRTITGSIRKDLLLIDKVIGVGEIAIS 159 (387)
T ss_pred HHHHHhCCceEEecCc-CCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCcCchhhHHHHHHHHHHhcCcceEEEc
Confidence 5678999999999986 44444444555555555444333333332221100001 1 11112222111222221
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHhcCC------cEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKR------PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
. .........++.++...++..+. .+.+|... ....
T Consensus 160 ~-------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~-------------------------------~~~~ 201 (387)
T cd01308 160 D-------HRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGD-------------------------------GKRA 201 (387)
T ss_pred C-------CCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC-------------------------------chHH
Confidence 1 11224556677777777765332 24444421 1234
Q ss_pred HHHHHHHHHhhccCCCCCCceE-EEEecCCh--hHHHHHHHHHHhCCCCEEEe--cccccccccccCCCCCCCceeEcCC
Q 010547 269 IRELLTVAKDTRTDGPAEGAHL-HIVHLSDA--SSSLDLLMEAKTNGDSITVE--TCPHYLAFSAEEIPDGDTRFKCAPP 343 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~-~~~h~~~~--~~~~~~i~~~~~~g~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~ 343 (507)
+++..++.++. |.++ ++.|.... .+..+...+..++|..+... .+++++ ..|+
T Consensus 202 ~~~i~~~~~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~---------------~~~~ 259 (387)
T cd01308 202 LSPIFELIEET-------EIPITQFLPTHINRTAPLFEQGVEFAKMGGTIDLTSSIDPQFR---------------KEGE 259 (387)
T ss_pred HHHHHHHHHhc-------CCCcceeECCcccCCHHHHHHHHHHHHcCCcEEEECCCCcccc---------------ccCc
Confidence 56666666654 5444 44444332 12222233344455544332 222111 1222
Q ss_pred CCChhhHHHHHHHHhcCC---eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHh
Q 010547 344 IRDAANKEKLWEALMDGH---IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWS 420 (507)
Q Consensus 344 ~~~~~~~~~~~~~l~~G~---~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T 420 (507)
+ ...+.++.++.+|. .++++||+...... ....+.+. ..++.+....+..+.......+++++++++++|
T Consensus 260 ~---~~~~~l~~~~~~g~~~d~i~l~TD~~~~~p~--~~~~g~~~--~~g~~~~~~~~~~~~~~v~~~~i~~~~al~~~T 332 (387)
T cd01308 260 V---RPSEALKRLLEQGVPLERITFSSDGNGSLPK--FDENGNLV--GLGVGSVDTLLREVREAVKCGDIPLEVALRVIT 332 (387)
T ss_pred c---ChHHHHHHHHHhCCCCCcEEEEECCCCCccc--CccCCeEE--ecCcCcHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 2 13456678888885 35999997422110 01112221 235666776666666444555699999999999
Q ss_pred hchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC
Q 010547 421 ERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 421 ~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
.|||+++|++++|+|++|++|||+++|.+. .+..|+++|++|+++|++..
T Consensus 333 ~npA~~lg~~~~G~i~~G~~ADlvv~d~~~---------------------------~~~~~~~~G~~v~~~~~~~~ 382 (387)
T cd01308 333 SNVARILKLRKKGEIQPGFDADLVILDKDL---------------------------DINSVIAKGQIMVRNGKLLV 382 (387)
T ss_pred HHHHHHhCCCCCCCcCCCCcCCEEEEcCCC---------------------------CEEEEEECCEEEEECCeEee
Confidence 999999999548999999999999999651 57889999999999999864
No 62
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=2.7e-30 Score=260.89 Aligned_cols=343 Identities=22% Similarity=0.263 Sum_probs=200.4
Q ss_pred cceEEEEecEEECCCC--------ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC
Q 010547 42 YNQYWLTSKRIVTPKG--------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT 113 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~--------~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~ 113 (507)
+.+++|+|++|+++++ +.+++|+|+||||++|++..+.+..+ +.++||+.|++|+|||||+|+|+......
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~-~~~~iD~~g~~v~PG~id~H~Hl~~~~~~ 80 (406)
T PRK09356 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPAAY-AAEVIDAGGKLVTPGLIDCHTHLVFGGNR 80 (406)
T ss_pred CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccccc-CceEEECCCCEEeeceEecCCCcccCCCc
Confidence 5679999999998763 33789999999999999875443221 36899999999999999999999753211
Q ss_pred C-----------CC-------C---------------h----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHH
Q 010547 114 E-----------WE-------G---------------F----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA 156 (507)
Q Consensus 114 ~-----------~~-------~---------------~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~ 156 (507)
. +. . + ...+..++++||||+.++. ...-.........+..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~ 159 (406)
T PRK09356 81 ANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKS-GYGLDLETELKMLRVARR 159 (406)
T ss_pred HHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeec-cCCCCHHHHHHHHHHHHH
Confidence 0 00 0 0 1123456899999999763 111000011111111222
Q ss_pred HhcCceeeEE--Eec--cccCCC----cccHH-----HHHHHHHc-CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHh
Q 010547 157 AEKRIYVDVG--FWG--GLVPEN----AYNAS-----ALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR 222 (507)
Q Consensus 157 ~~~~~~~~~~--~~~--~~~~~~----~~~~~-----~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~ 222 (507)
......+.+. ..+ ++.... +...+ .++..... ++..++.+. .....+++.+.++++.|++
T Consensus 160 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~~~l~~~~~~A~~ 233 (406)
T PRK09356 160 LGEEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEEGLADAVDVFC------ETGAFSVEQSERVLEAAKA 233 (406)
T ss_pred HhhhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhcCCcceEEEEe------cCCCCCHHHHHHHHHHHHH
Confidence 2222111111 110 011000 00011 11121222 233443321 1124678999999999999
Q ss_pred cCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHH
Q 010547 223 YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSL 302 (507)
Q Consensus 223 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~ 302 (507)
+|.++.+|+..... ...+.... +. + ...+.|+... +.
T Consensus 234 ~g~~v~~H~~~~~~-----------------------------~~~~~~~~----~~-------~-~~~~~H~~~~--~~ 270 (406)
T PRK09356 234 LGLPVKIHAEQLSN-----------------------------LGGAELAA----EY-------G-ALSADHLEYL--DE 270 (406)
T ss_pred CCCCEEEEEecccC-----------------------------CCHHHHHH----Hc-------C-CcEehHhhcC--CH
Confidence 99999999843210 00011111 11 1 1234565542 23
Q ss_pred HHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCC-CChhhhcccc
Q 010547 303 DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDE 381 (507)
Q Consensus 303 ~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~-~~~~~~~~~~ 381 (507)
+.++.+++.|+.+. +||...... +. ....++.++++.|+++++|||+.+ .+....
T Consensus 271 ~~~~~la~~g~~~~--~~P~~~~~l-------~~-----------~~~~~~~~l~~~Gi~v~lgtD~~~~~~~~~~---- 326 (406)
T PRK09356 271 AGIAAMAEAGTVAV--LLPGAFYFL-------RE-----------TQYPPARLLRDAGVPVALATDFNPGSSPTES---- 326 (406)
T ss_pred HHHHHHHHhCCEEE--ECccchhhc-------Cc-----------ccCchHHHHHHCCCeEEEeCCCCCCCChhHH----
Confidence 45666677776544 466321110 00 012245677788999999999754 221110
Q ss_pred CCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCC
Q 010547 382 GNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHP 459 (507)
Q Consensus 382 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~ 459 (507)
+...+.. ....+++++++++++|.|||+++|+ +++|+|++||.|||+++|.++...+.
T Consensus 327 ----------------~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~~~~---- 386 (406)
T PRK09356 327 ----------------LLLAMNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWDAPSPAELP---- 386 (406)
T ss_pred ----------------HHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEECCCchhhhh----
Confidence 2222222 2356899999999999999999999 66899999999999999987543211
Q ss_pred cccCCCCCccccCcEEeeEEEEEEECCEEEEe
Q 010547 460 VHMKHPSISAYLGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~ 491 (507)
.. ....+|..||++|++||+
T Consensus 387 -~~-----------~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 387 -YH-----------FGVNPVETVVKNGEVVVD 406 (406)
T ss_pred -hh-----------hCCCCccEEEECCEEeeC
Confidence 00 012379999999999985
No 63
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.98 E-value=2.7e-30 Score=259.45 Aligned_cols=357 Identities=24% Similarity=0.291 Sum_probs=216.4
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC--C-C----CCCCcEEecCCCEEecceeecccccCCCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP--R-N----SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE 114 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~--~-~----~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~ 114 (507)
.++++|+|++|+|.+++.+++|.|+||||++|++...+. . . ..++++||++|++|+|||||+|+|+..+.
T Consensus 65 ~MDlVIkNg~VID~~gi~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~P~--- 141 (567)
T TIGR01792 65 VLDLVITNALILDWTGIYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYISPQ--- 141 (567)
T ss_pred cCcEEEECeEEECCCCeEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCCcc---
Confidence 457999999999987778899999999999999754321 0 0 12568999999999999999999985432
Q ss_pred CCChhHHHHHHHhCCceEEEeCCC----CCCCCCCC--HHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPL----NSDPSTIS--TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~----~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
..+.++..||||+++.+. ++.|.... ........++.. ...+++.+++.. .....+.+.++.+.
T Consensus 142 ------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~-~~~in~g~~g~g---~~~~~~~L~e~i~a 211 (567)
T TIGR01792 142 ------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAAD-GLPINFGFTGKG---SGSGPAALIEQIEA 211 (567)
T ss_pred ------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhc-cCCccEEEEeCC---ccchHHHHHHHHHc
Confidence 357889999999999532 12222222 222233334443 344666554321 12345667777889
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
|+.+++.+. .+..+++.+.++++.|++++.++.+|++...+ ...
T Consensus 212 Ga~gfK~h~-------~y~~s~e~L~~al~~A~e~gv~V~iH~ET~~E-----------------------------~g~ 255 (567)
T TIGR01792 212 GACGLKVHE-------DWGATPAAIDNALSVADEYDVQVAVHTDTLNE-----------------------------SGF 255 (567)
T ss_pred CCcEEEeCC-------CCCCCHHHHHHHHHHHHHcCCEEEEeCCCccc-----------------------------chH
Confidence 999998743 33689999999999999999999999965432 111
Q ss_pred HHHHHHHHHhhccCCCCCCceEEEEecCCh--hHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEc----C
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDA--SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCA----P 342 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~--~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----p 342 (507)
++..++... +.++|..|.... ....+.++.+...++..+ .+.| ...++.+.+...-...+.+ |
T Consensus 256 ve~t~~a~g---------~rpIh~~H~~G~g~ghapdi~~~~~~~~~~~~-st~p-t~p~~~~~~~e~~~m~~~~h~l~~ 324 (567)
T TIGR01792 256 VEDTIAAFK---------GRTIHTYHTEGAGGGHAPDIIVVVGYNNILPS-STNP-TLPYTVNTIDEHLDMLMVCHHLNP 324 (567)
T ss_pred HHHHHHHHC---------CCcchhHhhcCCCCCcHHHHHHHcCCCCcccC-CCCC-CCCCccCchhhhcCeEEEeccCCC
Confidence 233333322 677888887632 023445554444443221 1222 2333333333322222222 2
Q ss_pred CCCC----hhh---HHHH--HH-HHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCC-
Q 010547 343 PIRD----AAN---KEKL--WE-ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGV- 410 (507)
Q Consensus 343 ~~~~----~~~---~~~~--~~-~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gl- 410 (507)
.+.. ... .+.+ -. +-..|+...++||..+-- .++.+..++-....+. ...|.
T Consensus 325 ~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mg----------------r~~~~~~r~~q~a~k~~~~~g~~ 388 (567)
T TIGR01792 325 KIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMG----------------RIGEVVTRCWQTADKMKKQRGPL 388 (567)
T ss_pred CCcccchhhhhhccceeccccchhhhCCcEEEecCCchhhC----------------cccceeechHHHHHHHHHhcCCC
Confidence 2211 000 0011 11 233599999999975221 1111111111111111 11121
Q ss_pred ---C----HHH---HHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEE
Q 010547 411 ---T----LEQ---LASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKV 479 (507)
Q Consensus 411 ---s----~~~---al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 479 (507)
+ .+. .+++.|.|||+++|+ +++|+|++||.|||||||.+. + .. .+
T Consensus 389 ~~~~~~~~~~rl~r~L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~---------f-~~--------------~p 444 (567)
T TIGR01792 389 PGDSPGNDNNRVKRYVAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAF---------F-GV--------------KP 444 (567)
T ss_pred cccccCChhhhHHHHHHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcc---------c-CC--------------Ch
Confidence 1 111 299999999999999 779999999999999999652 1 11 35
Q ss_pred EEEEECCEEEEec-CcccCC
Q 010547 480 LATISRGNLVYKE-GNHAPA 498 (507)
Q Consensus 480 ~~v~v~G~~v~~~-g~~~~~ 498 (507)
..||++|+++|.. |....+
T Consensus 445 ~~v~~~G~i~~~~~Gd~~as 464 (567)
T TIGR01792 445 DMVLKGGLIAWAIMGDPNAS 464 (567)
T ss_pred heEEECCEEEEEeCCCcccc
Confidence 7899999999976 665433
No 64
>PRK07213 chlorohydrolase; Provisional
Probab=99.98 E-value=8.2e-30 Score=253.28 Aligned_cols=337 Identities=20% Similarity=0.217 Sum_probs=199.6
Q ss_pred EEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---------
Q 010547 45 YWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------- 113 (507)
Q Consensus 45 ~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~--------- 113 (507)
++|+|++|++++. ..+++|+|+||+|++|++.. ++.++||++|++| |||||+|+|+......
T Consensus 2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~~~l~ 74 (375)
T PRK07213 2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIGKSLD 74 (375)
T ss_pred EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCCCCHH
Confidence 6899999999765 45788999999999998751 2568999999999 9999999999753110
Q ss_pred CC-----------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc
Q 010547 114 EW-----------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV 172 (507)
Q Consensus 114 ~~-----------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (507)
.+ +. ....+.+++++||||+.|+. .. . ...+....++.... .+.....+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~~--~---~~~~~~~~~a~~~~-~~r~~~~~~~~ 147 (375)
T PRK07213 75 ELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFR-EG--G---IKGINLLKKASSDL-PIKPIILGRPT 147 (375)
T ss_pred HHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhh-hc--C---hhHHHHHHHHHHcC-CCceEEecCCC
Confidence 00 00 12335567899999999863 11 1 11122222222221 11111111110
Q ss_pred C-CCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCcCCc
Q 010547 173 P-ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTLDT 250 (507)
Q Consensus 173 ~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~~ 250 (507)
. ......+.+++..+. ..++.. ......+++.++++++.|++++.++.+|+.+... ........+
T Consensus 148 ~~~~~~~~~~~~~~~~~-~~g~~~-------~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~G----- 214 (375)
T PRK07213 148 EADENELKKEIREILKN-SDGIGL-------SGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSLEKYG----- 214 (375)
T ss_pred cccchhhHHHHHHHHHh-cccccc-------cccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHHHHcC-----
Confidence 0 111112223332221 112211 2334578899999999999999999999854322 000000000
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccC
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 330 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~ 330 (507)
...++.+. +.+. ... .+.|+... +.+.++.+++.|+.+.. ||..-..
T Consensus 215 ---------------~~~v~~~~----~~G~-----~~~-~i~H~~~~--~~~~i~~la~~g~~v~~--~P~sn~~---- 261 (375)
T PRK07213 215 ---------------MTEIERLI----NLGF-----KPD-FIVHATHP--SNDDLELLKENNIPVVV--CPRANAS---- 261 (375)
T ss_pred ---------------CChHHHHH----hcCC-----CCC-EEEECCCC--CHHHHHHHHHcCCcEEE--CCcchhh----
Confidence 00122222 2211 111 35777653 33457777888876544 6631110
Q ss_pred CCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCC
Q 010547 331 IPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV 410 (507)
Q Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gl 410 (507)
......++.++++.|+++++|||..+++... + +..+.......++
T Consensus 262 ---------------l~~g~~~v~~l~~~Gv~v~lGTD~~~~~~~~-~-------------------~~e~~~~~~~~~~ 306 (375)
T PRK07213 262 ---------------FNVGLPPLNEMLEKGILLGIGTDNFMANSPS-I-------------------FREMEFIYKLYHI 306 (375)
T ss_pred ---------------hccCCccHHHHHHCCCEEEEeeCCCCCchHh-H-------------------HHHHHHHHHHhCc
Confidence 0011234678889999999999976432111 0 1111112234579
Q ss_pred CHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE---eeEEEEEEECCE
Q 010547 411 TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL---SGKVLATISRGN 487 (507)
Q Consensus 411 s~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~V~~v~v~G~ 487 (507)
+++++++++|.|||++||+++.|+|++||+||||++|.+..... .+|+..+.. .+.|..|||+||
T Consensus 307 ~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d~~~~~p~------------~dp~~~lV~~~~~~~v~~v~v~G~ 374 (375)
T PRK07213 307 EPKEILKMATINGAKILGLINVGLIEEGFKADFTFIKPTNIKFS------------KNPYASIITRCESGDIVNKILKGK 374 (375)
T ss_pred CHHHHHHHHHHHHHHHhCCCCcCCcCCCCcccEEEEcCcccccc------------CCchHHHhhhccCCCceEEEECCc
Confidence 99999999999999999996699999999999999997532211 344444443 346999999998
Q ss_pred E
Q 010547 488 L 488 (507)
Q Consensus 488 ~ 488 (507)
.
T Consensus 375 ~ 375 (375)
T PRK07213 375 L 375 (375)
T ss_pred C
Confidence 4
No 65
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=99.98 E-value=1.1e-30 Score=262.49 Aligned_cols=367 Identities=23% Similarity=0.262 Sum_probs=228.9
Q ss_pred CcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCC-CCCcEEecCCCEEecceeecccccCCCCCCC---
Q 010547 41 PYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNS-KTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--- 114 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~-~~~~viD~~g~~v~PGfID~H~H~~~~~~~~--- 114 (507)
+..++++.||+|+|++. ..-.+|.|+||||++||...+..... +++++||++|++|+|||||+|+|+...+...
T Consensus 3 ~~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~ 82 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLEL 82 (535)
T ss_pred cccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhcc
Confidence 46789999999999986 44678999999999999987665443 4789999999999999999999993221110
Q ss_pred --------------------------C-----------------------------------------------------
Q 010547 115 --------------------------W----------------------------------------------------- 115 (507)
Q Consensus 115 --------------------------~----------------------------------------------------- 115 (507)
|
T Consensus 83 ~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~G 162 (535)
T COG1574 83 NLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAG 162 (535)
T ss_pred cccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcC
Confidence 0
Q ss_pred ---C------------------------C-------------------hhH-HHHHHHhCCceEEEeCCCCCCCCCCCHH
Q 010547 116 ---E------------------------G-------------------FPS-GTKAAAAGGITTLIDMPLNSDPSTISTE 148 (507)
Q Consensus 116 ---~------------------------~-------------------~~~-~~~~~l~~GvTt~~~~~~~~~p~~~~~~ 148 (507)
. . ... ..+.+++.|+|++.++. . + .....
T Consensus 163 i~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~-~--~-~~~~~ 238 (535)
T COG1574 163 ITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMA-G--Y-QGYYA 238 (535)
T ss_pred CCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEccc-c--c-ccchh
Confidence 0 0 001 33466789999999875 2 1 12222
Q ss_pred HHHHHHHHHh-cCceeeEEEeccccCCCcccHHHHHHHHH-cC------CcEEEEcc----------------cCCCCCC
Q 010547 149 TLKLKVDAAE-KRIYVDVGFWGGLVPENAYNASALEALLN-AG------VLGLKSFM----------------CPSGIND 204 (507)
Q Consensus 149 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g------~~~~~~~~----------------~~~~~~~ 204 (507)
.+........ +...+++... +....... ....... .+ ..++|.|. ...+..+
T Consensus 239 ~~~~~r~~~~~~~l~~rv~~~--l~~~~~~~--~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G 314 (535)
T COG1574 239 DYEAYRALAAGGELPVRVALL--LFTEDLKE--ERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSG 314 (535)
T ss_pred HHHHHHHHHhcCcceEEEEee--ccccchhh--HHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCC
Confidence 2222222222 2333333221 11111110 1111111 11 11222321 1111225
Q ss_pred CCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCC
Q 010547 205 FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGP 284 (507)
Q Consensus 205 ~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 284 (507)
.+..+++++.++++.+.++|.++.+|+ -.+.+++..++.+++...+.+
T Consensus 315 ~~l~~~e~l~~~v~~a~~~gl~v~vHA--------------------------------iGD~Av~~~LdafE~~~~~~~ 362 (535)
T COG1574 315 ELLLTEEELEELVRAADERGLPVAVHA--------------------------------IGDGAVDAALDAFEKARKKNG 362 (535)
T ss_pred CcccCHHHHHHHHHHHHHCCCcEEEEE--------------------------------echHHHHHHHHHHHHHhhhcC
Confidence 667899999999999999999999999 345577888888887765544
Q ss_pred CCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC-CCCceeEcCCCCChhhHHHHHHHHhcCCee
Q 010547 285 AEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD-GDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (507)
Q Consensus 285 ~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 363 (507)
..+.+..+.|++. ...+.+.++++.|+..+ +.|++......-+.. .+.. ......++..+++.|+++
T Consensus 363 ~~~~r~rieH~~~--v~~~~i~R~~~Lgv~~s--vQP~f~~~~~~~~~~rlG~~--------r~~~~~p~~~ll~~G~~l 430 (535)
T COG1574 363 LKGLRHRIEHAEL--VSPDQIERFAKLGVIAS--VQPNFLFSDGEWYVDRLGEE--------RASRSYPFRSLLKAGVPL 430 (535)
T ss_pred CccCCceeeeeee--cCHhHHHHHHhcCceEe--eccccccccchHHHHhhhhh--------hhhccCcHHHHHHCCCeE
Confidence 4577888999987 55678888888886544 456554432111100 0000 111123456788999999
Q ss_pred EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-----H--HhcCCCHHHHHHHHhhchhHHhCC-CCCCcc
Q 010547 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-----G--RKYGVTLEQLASWWSERPAKLAGQ-VSKGAI 435 (507)
Q Consensus 364 ~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~--~~~gls~~~al~~~T~n~A~~lgl-~~~G~I 435 (507)
+.|||+.....+ +|. +++... -+. . .+..+|++||+++.|.|+|++.|. +++|+|
T Consensus 431 a~gSD~Pv~~~d-------P~~-------~i~~AV---tr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~L 493 (535)
T COG1574 431 AGGSDAPVEPYD-------PWL-------GIYAAV---TRKTPGGRVLGPEERLTREEALRAYTEGGAYASGAEGEKGSL 493 (535)
T ss_pred eccCCCCCCCCC-------hHH-------HHHHHH---cCCCCCCCCCccccccCHHHHHHHHhhhhHHhhhcccccccc
Confidence 999998542211 110 000000 000 0 011599999999999999999999 889999
Q ss_pred ccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 436 AIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 436 ~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
++||.|||+|+|.|. +.+++. ..+.. +|..||++||+||+.
T Consensus 494 e~G~~AD~~Vld~d~-f~~~~~---~i~~~------------~v~~T~~~Gk~VY~~ 534 (535)
T COG1574 494 EPGKLADFAVLDRDP-FTVDPD---SIKDT------------KVVLTIVAGKVVYRA 534 (535)
T ss_pred ccCceeeEEEecCCc-ccCChH---Hhccc------------eEEEEEEcCeEeecC
Confidence 999999999999643 333322 11222 699999999999974
No 66
>PRK05985 cytosine deaminase; Provisional
Probab=99.98 E-value=1.5e-29 Score=253.62 Aligned_cols=353 Identities=17% Similarity=0.159 Sum_probs=213.4
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC-CC------
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-EW------ 115 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~-~~------ 115 (507)
.+++|+|++|+++. ..+|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...... .+
T Consensus 2 ~~~~i~~~~i~~~~---~~~v~i~~g~i~~i~~~~~~~---~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~~~~~~~ 75 (391)
T PRK05985 2 TDLLFRNVRPAGGA---AVDILIRDGRIAAIGPALAAP---PGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYPNEPG 75 (391)
T ss_pred CCEEEECcEECCCC---eeEEEEECCEEEEecCCCCCC---CCCcEEECCCCEEecceEeeEEccCccccCCccccCCCC
Confidence 56799999999975 568999999999999865433 256899999999999999999999642111 00
Q ss_pred C------------------C----hhHHHHHHHhCCceEEEeCCCCCCCC--CCCHHHHHHHHHHHhcCceeeEEEeccc
Q 010547 116 E------------------G----FPSGTKAAAAGGITTLIDMPLNSDPS--TISTETLKLKVDAAEKRIYVDVGFWGGL 171 (507)
Q Consensus 116 ~------------------~----~~~~~~~~l~~GvTt~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (507)
. . .......++++|+|+++++. ...|. ....+.+.+..+.......+++......
T Consensus 76 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 154 (391)
T PRK05985 76 PSLRERIANERRRRAASGHPAAERALALARAAAAAGTTAMRSHV-DVDPDAGLRHLEAVLAARETLRGLIDIQIVAFPQS 154 (391)
T ss_pred CCHHHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCcceEEeeE-ccCCCcccchHHHHHHHHHHhhCcccEEEEeccCc
Confidence 0 1 11224567899999999876 22232 2223344444433333444444332211
Q ss_pred cC-CCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc
Q 010547 172 VP-ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 250 (507)
Q Consensus 172 ~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 250 (507)
.. ..+...+.+++..+.|+..+.. +.+ ......+++.+.++++.|+++|.++.+|+.....
T Consensus 155 g~~~~~~~~~ll~~~l~~g~~~~gg-~~p---~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d-------------- 216 (391)
T PRK05985 155 GVLSRPGTAELLDAALRAGADVVGG-LDP---AGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGE-------------- 216 (391)
T ss_pred cccCCcCHHHHHHHHHHcCCCEEeC-CCC---CCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCC--------------
Confidence 11 1112346677777777642222 211 2223467799999999999999999999855332
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-----hHHHHHHHHHHhCCCCEEEeccccccc
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPHYLA 325 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~-----~~~~~~i~~~~~~g~~i~~~~~~~~~~ 325 (507)
.....+...++...+.+. ..++.+.|+..- ....+.++.+++.|+.+... +.
T Consensus 217 -------------~~~~~~~~~~e~~~~~g~-----~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~--~~--- 273 (391)
T PRK05985 217 -------------LGAFQLERIAARTRALGM-----QGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTN--AP--- 273 (391)
T ss_pred -------------ccHHHHHHHHHHHHHhCC-----CCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEe--CC---
Confidence 011123333444333311 124778887531 12235678888888876532 10
Q ss_pred ccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH
Q 010547 326 FSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG 405 (507)
Q Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 405 (507)
......++.++++.|+.+++|||+...+... ......++..........
T Consensus 274 --------------------~~~~~~~~~~l~~~Gv~v~lGtD~~~~~~~p-----------~~~~~~~~~~~~~~~~~~ 322 (391)
T PRK05985 274 --------------------GSVPVPPVAALRAAGVTVFGGNDGIRDTWWP-----------YGNGDMLERAMLIGYRSG 322 (391)
T ss_pred --------------------CCCCCCCHHHHHHCCCeEEEecCCCCCCCcC-----------CCCCcHHHHHHHHHHHHc
Confidence 0011224568888999999999975321110 011122221110000000
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEEC
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISR 485 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~ 485 (507)
....-+++++++++|.|||+++|+++ ++|++||.||||++|.++...... ..+ .+..||++
T Consensus 323 ~~~~~~~~~al~~~T~~~A~~lg~~~-~~l~~G~~ADlvvld~~~~~~~~~------~~~------------~~~~v~~~ 383 (391)
T PRK05985 323 FRTDDELAAALDCVTHGGARALGLED-YGLAVGARADFVLVDAETVAEAVV------AVP------------VRRLVVRG 383 (391)
T ss_pred cCChHHHHHHHHHHcchhHHHhCCcc-cCCCCCCcCCEEEECCCCHHHHHh------hCC------------cceEEEEC
Confidence 01122457999999999999999954 469999999999999876432210 111 35779999
Q ss_pred CEEEEecC
Q 010547 486 GNLVYKEG 493 (507)
Q Consensus 486 G~~v~~~g 493 (507)
|++||++|
T Consensus 384 G~~v~~~~ 391 (391)
T PRK05985 384 GRIVARDG 391 (391)
T ss_pred CEEEecCC
Confidence 99999876
No 67
>PRK09237 dihydroorotase; Provisional
Probab=99.98 E-value=1.7e-29 Score=252.28 Aligned_cols=348 Identities=19% Similarity=0.240 Sum_probs=214.6
Q ss_pred EEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHH
Q 010547 45 YWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122 (507)
Q Consensus 45 ~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~ 122 (507)
++|+|++|+|+.. ...++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+. ...+. +..
T Consensus 1 ~~i~~~~v~d~~~~~~~~~~v~i~~g~I~~v~~~~~~~---~~~~~iD~~g~~v~PG~iD~H~H~~~~~-~~~~~--~~~ 74 (380)
T PRK09237 1 LLLRGGRVIDPANGIDGVIDIAIEDGKIAAVAGDIDGS---QAKKVIDLSGLYVSPGWIDLHVHVYPGS-TPYGD--EPD 74 (380)
T ss_pred CEEEeEEEECCCCCcccceEEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEEeeecCCCCC-CccCC--CHH
Confidence 4799999999765 45689999999999998764432 2568999999999999999999998543 22221 456
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHH-hc--CceeeEEEeccccCCCc-----ccHHHHHHHHH---cCCc
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA-EK--RIYVDVGFWGGLVPENA-----YNASALEALLN---AGVL 191 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~g~~ 191 (507)
+.++++||||+++++ .. .....+.+....... .. ..+.++...+....... ...+.++++.. .|+.
T Consensus 75 ~~~~~~G~Ttv~~~~-~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 151 (380)
T PRK09237 75 EVGVRSGVTTVVDAG-SA--GADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDFIV 151 (380)
T ss_pred HHHHhCCcCEEEECC-CC--CCCCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCcEE
Confidence 778999999999986 32 234566666555443 22 23334443332222111 23455666664 4788
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHH
Q 010547 192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271 (507)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 271 (507)
+++.++.+.... ....+.++.....+++.++++.+|+++... + ..+
T Consensus 152 glk~~~~~~v~~---~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~----------------------------~---~~~ 197 (380)
T PRK09237 152 GIKARMSSSVVG---DNGIEPLELAKAIAAEANLPLMVHIGNPPP----------------------------S---LEE 197 (380)
T ss_pred EEEEEEeccccc---ccCCchHHHHHHHHHhcCCCEEEEcCCCCC----------------------------C---HHH
Confidence 999887543211 111133444455566899999999965431 1 122
Q ss_pred HHHHHHhhccCCCCCCceEEEEecCChh---------HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcC
Q 010547 272 LLTVAKDTRTDGPAEGAHLHIVHLSDAS---------SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAP 342 (507)
Q Consensus 272 ~~~l~~~~~~~~~~~g~~~~~~h~~~~~---------~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p 342 (507)
+..+... + ..+.|+.+.. ...+.+.+..++|..+..... .
T Consensus 198 l~~~l~~--------g--~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g---------------~------ 246 (380)
T PRK09237 198 ILELLRP--------G--DILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHG---------------T------ 246 (380)
T ss_pred HHhhccC--------C--CEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCC---------------C------
Confidence 2222221 2 1245555321 233566666677765443110 0
Q ss_pred CCCChhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhh
Q 010547 343 PIRDAANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSE 421 (507)
Q Consensus 343 ~~~~~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~ 421 (507)
.......+.+++.+|+ ..+++||..+.+... +-...+...+..+.+.|++++++++++|.
T Consensus 247 ---~~~~~~~~~~l~~~g~~~~~l~tD~~~~~~~~----------------~~~~~l~~~~~~~~~~g~~~~~al~~aT~ 307 (380)
T PRK09237 247 ---ASFSFKVAEAAIAAGILPDTISTDIYCRNRIN----------------GPVYSLATVMSKFLALGMPLEEVIAAVTK 307 (380)
T ss_pred ---CcccHHHHHHHHHCCCCceEEECCCCCCCccc----------------chHhHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 0011123345667785 568999975432110 00011333444455679999999999999
Q ss_pred chhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe---eEEEEEEECCEEEEecCccc
Q 010547 422 RPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVLATISRGNLVYKEGNHA 496 (507)
Q Consensus 422 n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G~~v~~~g~~~ 496 (507)
|||++||+++.|+|++|+.|||++++.++.. .+. .+++...... ..|+.||++||+||.+-...
T Consensus 308 n~A~~lgl~~~G~l~~G~~ADlvv~~~~~~~-~~~----------~d~~~~~~~~~~~~~~~~~~v~G~~~~~~~~~~ 374 (380)
T PRK09237 308 NAADALRLPELGRLQVGSDADLTLFTLKDGP-FTL----------TDSEGDSLIGERLLTPLATVRGGKVVLTEQGSA 374 (380)
T ss_pred HHHHHcCCCCCCcCCCCCcCCEEEEeCCCCC-ccc----------cCCCCCEEEecCCCcceEEEECCEEEEccCccc
Confidence 9999999966899999999999999965432 110 1222222221 36999999999999874433
No 68
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=99.98 E-value=7.6e-30 Score=257.77 Aligned_cols=354 Identities=17% Similarity=0.154 Sum_probs=209.1
Q ss_pred EEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC----CCCCC---C---
Q 010547 47 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP----GRTEW---E--- 116 (507)
Q Consensus 47 i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~----~~~~~---~--- 116 (507)
|+|++|+|+. ..+++|+|+||+|++|++..+.+ ++.++||++|++|+|||||+|+|+... ..... .
T Consensus 2 ~~~~~~~~~~-~~~~~v~I~~g~I~~Vg~~~~~~---~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~~~~~~ 77 (398)
T cd01293 2 LRNARLADGG-TALVDIAIEDGRIAAIGPALAVP---PDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLE 77 (398)
T ss_pred eeeeEEeCCC-ceEEEEEEECCEEEEEecCCCCC---CCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCCccccHH
Confidence 7899999974 47889999999999999875532 368999999999999999999999742 11100 0
Q ss_pred ---------------C----hhHHHHHHHhCCceEEEeCCCCCCCCCC--CHHHHHHHHHHHhcCceeeEEEeccc-cCC
Q 010547 117 ---------------G----FPSGTKAAAAGGITTLIDMPLNSDPSTI--STETLKLKVDAAEKRIYVDVGFWGGL-VPE 174 (507)
Q Consensus 117 ---------------~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 174 (507)
. ....+..++++||||+.++. ...+... ..+......+................ ...
T Consensus 78 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (398)
T cd01293 78 AIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHV-DVDPAAGLKALEALLELREEWADLIDLQIVAFPQHGLLS 156 (398)
T ss_pred HHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeee-cccccccchHHHHHHHHHHHhhccceEEEEeccCccccC
Confidence 0 12235677899999998764 2222211 12223233222222222211111100 001
Q ss_pred CcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccc
Q 010547 175 NAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254 (507)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 254 (507)
.....+.+++..+.|..-+..+. . ......+++.++++++.|++++.++.+|+.+...
T Consensus 157 ~~~~~~~v~~~~~~g~~~~~~~~-~---~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~------------------ 214 (398)
T cd01293 157 TPGGEELMREALKMGADVVGGIP-P---AEIDEDGEESLDTLFELAQEHGLDIDLHLDETDD------------------ 214 (398)
T ss_pred CCCHHHHHHHHHHhCCCEEeCCC-C---CcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCC------------------
Confidence 13445667777766653222211 1 1123567899999999999999999999854321
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh-----HHHHHHHHHHhCCCCEEEeccccccccccc
Q 010547 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-----SSLDLLMEAKTNGDSITVETCPHYLAFSAE 329 (507)
Q Consensus 255 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~-----~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~ 329 (507)
+ ....+.+.++...+.+. ..++.+.|+.... +..+.++.+++.|+.+.. ||........
T Consensus 215 ------~---~~~~~~~~~~~~~~~g~-----~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~--~p~s~~~l~~ 278 (398)
T cd01293 215 ------P---GSRTLEELAEEAERRGM-----QGRVTCSHATALGSLPEAEVSRLADLLAEAGISVVS--LPPINLYLQG 278 (398)
T ss_pred ------c---chhHHHHHHHHHHHhCC-----CCCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEe--CCCcchhhcc
Confidence 0 01122333444444311 1246777876431 224668888899987654 5532111000
Q ss_pred CCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCC--CChhhhccccCCccccCCCCchhhhHHHHHHHHHHh
Q 010547 330 EIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP--TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK 407 (507)
Q Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 407 (507)
. . ...| .......+.++++.|+++++|||... +.... .... +..+......
T Consensus 279 ~-~------~~~~---~~~~~~~~~~~~~~Gv~v~lGTD~~~~~~~~~~-------------~~~~----~~~~~~~~~~ 331 (398)
T cd01293 279 R-E------DTTP---KRRGVTPVKELRAAGVNVALGSDNVRDPWYPFG-------------SGDM----LEVANLAAHI 331 (398)
T ss_pred c-c------cCCC---CCCCCCcHHHHHHCCCeEEECCCCCCCCCcCCC-------------CCCH----HHHHHHHHHH
Confidence 0 0 0000 11223456788899999999999742 10000 0011 1111111222
Q ss_pred cCC----CHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEE
Q 010547 408 YGV----TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATI 483 (507)
Q Consensus 408 ~gl----s~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~ 483 (507)
.++ +.+++++++|.|+|+++|+ +.|+|++||.||||++|.++..++. .. ..++..||
T Consensus 332 ~~~~~~~~~~~al~~aT~~~A~~lg~-~~G~l~~Gk~ADlv~~d~~~~~~~~------~~------------~~~~~~v~ 392 (398)
T cd01293 332 AQLGTPEDLALALDLITGNAARALGL-EDYGIKVGCPADLVLLDAEDVAEAV------AR------------QPPRRVVI 392 (398)
T ss_pred HcCCChhhHHHHHHhcChhhhhhcCC-cCcccccCCcceEEEECCCCHHHHH------hc------------CCCccEEE
Confidence 344 3478999999999999999 6799999999999999988643320 00 12689999
Q ss_pred ECCEEE
Q 010547 484 SRGNLV 489 (507)
Q Consensus 484 v~G~~v 489 (507)
++|+++
T Consensus 393 ~~G~~~ 398 (398)
T cd01293 393 RKGRVV 398 (398)
T ss_pred ECCEEC
Confidence 999874
No 69
>PLN02303 urease
Probab=99.97 E-value=2.7e-30 Score=264.86 Aligned_cols=354 Identities=21% Similarity=0.285 Sum_probs=215.9
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC--CC-------CCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP--RN-------SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~--~~-------~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..+++|+|++|+|..++.+++|.|+||||++|++...+. .. ..+.++||++|++|+|||||+|+|+..+.+
T Consensus 333 ~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~~Pg~ 412 (837)
T PLN02303 333 SLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICPQL 412 (837)
T ss_pred cCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCCCCcH
Confidence 567999999999977788999999999999999753221 10 014689999999999999999999875432
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCC----CCCCC--CCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLN----SDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
.+.++++|+||++..+++ +.|.. .....+...++..+ ...+++.+++.. .....+++.++.
T Consensus 413 ---------~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~-~~pvn~Gf~gkG---~~s~l~eL~eli 479 (837)
T PLN02303 413 ---------ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTD-DLPLNFGFTGKG---NTAKPEGLHEII 479 (837)
T ss_pred ---------HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcc-cCCCcEEEEccC---cccCHHHHHHHH
Confidence 266777788887776422 22333 24666777666444 346777776532 224567788888
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
+.|+.+++.+. .+..+++.+.++++.|++++.++.+|+|+... .
T Consensus 480 eaGa~GfK~h~-------d~gvTpelL~raLe~AkelGVpVaIHAEdLnE-----------------------------~ 523 (837)
T PLN02303 480 KAGAMGLKLHE-------DWGTTPAAIDNCLDVAEEYDIQVTIHTDTLNE-----------------------------S 523 (837)
T ss_pred HcCcEEEEECC-------CCCCCHHHHHHHHHHHHHcCCEEEEecCcccc-----------------------------c
Confidence 89999999742 23567899999999999999999999977322 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEc---
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCA--- 341 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--- 341 (507)
..++..++... +.++|..|....- -..+.++.+...++..+ .+.| ...++.+.+...-...+.+
T Consensus 524 G~vE~t~~a~G---------~RpIh~~h~~Ga~gghapdi~~~~~~~nvlps-stnp-t~p~t~nt~~e~~dm~m~~h~l 592 (837)
T PLN02303 524 GCVEHSIAAFK---------GRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPS-STNP-TRPYTKNTIDEHLDMLMVCHHL 592 (837)
T ss_pred chHHHHHHHHC---------CChHHHHHhcCCCCCCCcHHHHhcCCCCccCC-CCCC-CCCCccCchhhhcCeEEeecCC
Confidence 11222222222 3334444432110 01223443333332211 1122 2223333333222222222
Q ss_pred -CCCCC----hh---hHHHH--HHH-HhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh---
Q 010547 342 -PPIRD----AA---NKEKL--WEA-LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK--- 407 (507)
Q Consensus 342 -p~~~~----~~---~~~~~--~~~-l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 407 (507)
|.+.. .. ..+.+ -.. -..|+...+.||..+--. ++-+-.++.....+...
T Consensus 593 ~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr----------------~ge~i~r~~q~A~k~~~~~g 656 (837)
T PLN02303 593 DKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGR----------------IGEVITRTWQTAHKMKSQRG 656 (837)
T ss_pred CCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCc----------------ccceeeehHHHHHHHHHhcC
Confidence 22110 00 00111 112 224899999999652210 01000001111111111
Q ss_pred ---------cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee
Q 010547 408 ---------YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG 477 (507)
Q Consensus 408 ---------~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (507)
-.+++++++++.|.|||+++|+ +.+|+|++||.||||||+++. + . .
T Consensus 657 ~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~---------f--g-~------------ 712 (837)
T PLN02303 657 ALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAF---------F--G-A------------ 712 (837)
T ss_pred CCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEecccc---------c--C-C------------
Confidence 1257799999999999999999 788999999999999999542 1 1 1
Q ss_pred EEEEEEECCEEEEec-Ccc
Q 010547 478 KVLATISRGNLVYKE-GNH 495 (507)
Q Consensus 478 ~V~~v~v~G~~v~~~-g~~ 495 (507)
.+..||++|++||.. |..
T Consensus 713 ~~~~vi~~G~ivy~~~gd~ 731 (837)
T PLN02303 713 KPEMVIKGGQIAWAQMGDP 731 (837)
T ss_pred CeeEEEECCEEEEccCCCc
Confidence 589999999999976 443
No 70
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=99.97 E-value=9.6e-30 Score=256.20 Aligned_cols=352 Identities=19% Similarity=0.152 Sum_probs=196.8
Q ss_pred eeeeEEEeCCEEEEeecCCCCCCC-CCCCcEEecCCCEEecceeecccccCCCCCC--------CC--------C----C
Q 010547 59 ISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------EW--------E----G 117 (507)
Q Consensus 59 ~~~~I~I~dG~I~~Vg~~~~~~~~-~~~~~viD~~g~~v~PGfID~H~H~~~~~~~--------~~--------~----~ 117 (507)
.+++|+|+||+|++||+..+.... +.+.++||++|++|+|||||+|+|+...... .| + +
T Consensus 5 ~~~~V~V~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (401)
T TIGR02967 5 EDGLLVVENGRIVAVGDYAELKETLPAGVEIDDYRGHLIMPGFIDTHIHYPQTEMIASYGEQLLEWLEKYTFPTEARFAD 84 (401)
T ss_pred eceEEEEECCEEEEecCcchhhhccCCCCeEEeCCCCEEecceeecccCchhhhhcccCCchHHHHHhhCcCccccccCC
Confidence 478999999999999986543211 1256899999999999999999998642111 00 0 0
Q ss_pred -------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC----C-cccHHHHHHH
Q 010547 118 -------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE----N-AYNASALEAL 185 (507)
Q Consensus 118 -------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~ 185 (507)
......+++++||||++++. ...+ .....+.+.......+............+. . ....+..+++
T Consensus 85 ~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~--~~~~~~~~a~~~~G~R~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 161 (401)
T TIGR02967 85 PDHAEEVAEFFLDELLRNGTTTALVFA-TVHP--ESVDALFEAALKRGMRMIAGKVLMDRNAPDYLRDTAESSYDESKAL 161 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecc-ccCH--HHHHHHHHHHHHCCCeEEEeeeeecCCCCcccccCHHHHHHHHHHH
Confidence 01123578999999999875 2111 111222222222222221211111000000 0 1112222333
Q ss_pred H----HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEecCCcc-cchhhhhcccCcCCccccccccCC
Q 010547 186 L----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKT 259 (507)
Q Consensus 186 ~----~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 259 (507)
. ..|. ++..+.+ ...+.+++++++++.+.|+++ +.++.+|+.+.. .........+ .
T Consensus 162 i~~~~~~g~--i~~~~~~---~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~-------------~ 223 (401)
T TIGR02967 162 IERWHGKGR--LLYAVTP---RFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFP-------------E 223 (401)
T ss_pred HHHHhCcCC--ceEEEEC---CcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcC-------------C
Confidence 2 2232 3333322 333468899999999999999 999999985432 1111111000 0
Q ss_pred CChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCcee
Q 010547 260 RPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK 339 (507)
Q Consensus 260 ~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~ 339 (507)
.| ...+...+.+ ..|.++.+.|+... ..+.++.+++.|+.+. +||...... +
T Consensus 224 ~~---------~~~~~l~~~g----~lg~~~~~~H~~~~--~~~~~~~l~~~g~~v~--~~P~~~~~~-------~---- 275 (401)
T TIGR02967 224 AK---------DYLDVYDHYG----LLGRRSVFAHCIHL--SDEECQRLAETGAAIA--HCPTSNLFL-------G---- 275 (401)
T ss_pred CC---------cHHHHHHHCC----CCCCCeEEEecccC--CHHHHHHHHHcCCeEE--EChHHHHHh-------c----
Confidence 00 1122223221 11556778888763 3446777888887654 366321100 0
Q ss_pred EcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHH--HHHHHhcCCCHHHHHH
Q 010547 340 CAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVT--WSYGRKYGVTLEQLAS 417 (507)
Q Consensus 340 ~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~gls~~~al~ 417 (507)
....++.+++++|+.+++|||..+.+... .++. +... +......+++++++++
T Consensus 276 --------~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~----------------~~~~-~~~~~~~~~~~~~~~~~~~~l~ 330 (401)
T TIGR02967 276 --------SGLFNLKKALEHGVRVGLGTDVGGGTSFS----------------MLQT-LREAYKVSQLQGARLSPFEAFY 330 (401)
T ss_pred --------cCCCCHHHHHHCCCeEEEecCCCCCCCcC----------------HHHH-HHHHHHHhhhcCCCCCHHHHHH
Confidence 01123457788899999999975321110 0110 1111 1112235699999999
Q ss_pred HHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe---eEEEEEEECC
Q 010547 418 WWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVLATISRG 486 (507)
Q Consensus 418 ~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G 486 (507)
++|.|||++||+ +++|+|++||.|||+++|.+.+...+.. ....... .+|+..+... ..|+.|||+|
T Consensus 331 ~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~~~-~~~~~~~-~~~~~~~v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 331 LATLGGARALDLDDRIGNFEPGKEADFVVLDPAATPLLALR-FEGADTL-EDKLFKLMYLGDDRNVAETYVAG 401 (401)
T ss_pred HHHHHHHHHhCCcCCccccCCCCccCEEEEcCCCCcccccc-cccccch-hhHHHHheeecCccceeEEEeCC
Confidence 999999999999 5689999999999999998764322100 0000001 3444444443 3599999998
No 71
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=99.97 E-value=1.2e-28 Score=239.29 Aligned_cols=329 Identities=18% Similarity=0.215 Sum_probs=255.1
Q ss_pred EEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc--eeeEEEecccc
Q 010547 95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLV 172 (507)
Q Consensus 95 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 172 (507)
+.+|-=-|+|+|+.++ .+.....-+.+.|||++++++ .+.|.....+.+....+.+.... .+++..++++.
T Consensus 2 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~vt~vv~mP-nt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v~ 74 (341)
T TIGR00856 2 LTIRRPDDWHLHLRDG------AMLKAVLPYTSEIFSRAIVMP-NLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTLY 74 (341)
T ss_pred ceecCccceeeeccCc------hHHHHHHHHHHhhcCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEEE
Confidence 4567778999999874 366777778888899999999 77787777888877777776655 36888888886
Q ss_pred CCCcccHHHHHHHHHc-CCcEEEEcccCCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCcCC
Q 010547 173 PENAYNASALEALLNA-GVLGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTLD 249 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~ 249 (507)
...+...++++++.+. |+.++|.|+...+.. +.+..+++.+.++++.+++.|.++.+|+++... +..
T Consensus 75 ~~~~~~~~Ei~~l~~~~Gv~g~Klf~~~~~~~~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~---------- 144 (341)
T TIGR00856 75 LTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDI---------- 144 (341)
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEEccCCcccCCCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCCccc----------
Confidence 5554466888888776 999999986432211 223345689999999999999999999987521 000
Q ss_pred ccccccccCCCChhHHHHHHHH-HHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 250 TRSYSTYLKTRPPSWEEAAIRE-LLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~-~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
...+..++.+ +..++.+ .++.++|+.|+++. .+++.++.++. .+++++||||+.++.
T Consensus 145 ------------~~~e~~a~~~~i~~lA~~------~~~~~~~i~H~st~-~~~~~i~~a~~---~vt~E~~ph~L~l~~ 202 (341)
T TIGR00856 145 ------------FDREARFIESVLEPLRQR------FPALKVVLEHITTK-DAIDYVEDGNN---RLAATITPQHLMFTR 202 (341)
T ss_pred ------------ccchhhhhHHHHHHHHHH------ccCCeEEEEecCcH-HHHHHHHHcCC---CEEEEEcHHHHhccH
Confidence 0012223333 3333333 34788999999998 99999988754 389999999999999
Q ss_pred cCCCC--CCCceeEcCCCCChhhHHHHHHHHhcCCee-EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH
Q 010547 329 EEIPD--GDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG 405 (507)
Q Consensus 329 ~~~~~--~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~-~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 405 (507)
+.+.. .+..++++||+|...+++.+++++.+|.++ .++|||+|+....+.. +..+.|+.+++..++.++...
T Consensus 203 ~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~-----~~~~~G~~g~e~~l~~~~~~~ 277 (341)
T TIGR00856 203 NDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKES-----SCGCAGCFSAPTALPSYAEVF 277 (341)
T ss_pred HHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCC-----CCCCCCcccHHHHHHHHHHHH
Confidence 98865 578999999999999999999999999999 6999999998776632 136789999999999888654
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCcccc-CcEEeeEE
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYL-GRRLSGKV 479 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~V 479 (507)
+.++++++++++.+.|||+.+|++ .| +|||++++ ..|.++.. .+.++.. ++||. +..+.++|
T Consensus 278 -~~~~~l~~~v~~~s~nPAk~~gl~-~~------dAdi~~~~--~~~~i~~~-~~~s~~~-~sp~~~~~~~~~~v 340 (341)
T TIGR00856 278 -EEMNALENLEAFCSDNGPQFYGLP-VN------STKIELVK--KEQQIPES-IALTDDT-LVPFRAGETLSWSV 340 (341)
T ss_pred -hcCCCHHHHHHHHhHhHHHHhCCC-CC------CceEEEEe--ccEEeCch-hccCCCC-cccccCCcccceee
Confidence 448999999999999999999993 34 89999994 67888877 7778888 99994 66655555
No 72
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=99.97 E-value=9.2e-29 Score=249.99 Aligned_cols=351 Identities=18% Similarity=0.150 Sum_probs=195.9
Q ss_pred ceeeeEEEeCCEEEEeecCCCCC-CCCCCCcEEecCCCEEecceeecccccCCCCCC---------CC--------C---
Q 010547 58 VISGAVEIKEGNIISIVSEEDWP-RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---------EW--------E--- 116 (507)
Q Consensus 58 ~~~~~I~I~dG~I~~Vg~~~~~~-~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---------~~--------~--- 116 (507)
+.+++|+|+||+|++||+..+.. ..+.++++||++|++|+|||||+|+|+...... .| +
T Consensus 24 ~~~g~V~v~~g~I~~vG~~~~~~~~~~~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl~~~~~~~e~~~ 103 (429)
T cd01303 24 VEDGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWLETYTFPEEAKF 103 (429)
T ss_pred ECCeEEEEECCEEEEeCchhhhhhhcCCCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHHHhhhhHHHHhc
Confidence 34899999999999999865432 112357899999999999999999998643111 00 0
Q ss_pred ----C----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc---CceeeEEEeccccCCC--cc---cH-
Q 010547 117 ----G----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGFWGGLVPEN--AY---NA- 179 (507)
Q Consensus 117 ----~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~---~~- 179 (507)
. ....+.+++++||||++++. ... ........+++.. +..+.........+.. .. ..
T Consensus 104 ~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~-----~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (429)
T cd01303 104 ADPAYAREVYGRFLDELLRNGTTTACYFA-TIH-----PESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYR 177 (429)
T ss_pred CCHHHHHHHHHHHHHHHHhCCceEEEeec-ccC-----hhHHHHHHHHHHHhCCeEEEeeeeecCCCCcccccCHHHHHH
Confidence 0 11233567899999999875 111 1222333333332 2222111110000100 10 11
Q ss_pred ---HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcC-CcEEEecCCccc-chhhhhcccCcCCccccc
Q 010547 180 ---SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK-RPLLVHAEMEKG-SERHVKLEDDTLDTRSYS 254 (507)
Q Consensus 180 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~-~~v~~H~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (507)
+.++.+...+ ..+...+.+ ......+++.++++.+.|++++ .++.+|+.+... +......
T Consensus 178 ~~~~~i~~~~~~~-~~v~~~~~p---~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~----------- 242 (429)
T cd01303 178 DTKRLIERWHGKS-GRVKPAITP---RFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKEL----------- 242 (429)
T ss_pred HHHHHHHHHhCcC-CceEEEEec---CcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHH-----------
Confidence 1222322221 112222222 2334678999999999999999 999999854221 1100000
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCC
Q 010547 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG 334 (507)
Q Consensus 255 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~ 334 (507)
.+. .....+.+.+.+ ..+.++.+.|+..- +.+.++.+++.|+.+.. ||..... +
T Consensus 243 -----~g~------~~~p~~~l~~~G----~l~~~~~l~H~~~l--~~~~~~~l~~~g~~v~~--~P~sn~~----l--- 296 (429)
T cd01303 243 -----FPG------ARDYLDVYDKYG----LLTEKTVLAHCVHL--SEEEFNLLKERGASVAH--CPTSNLF----L--- 296 (429)
T ss_pred -----cCC------CCCHHHHHHHCC----CCCCCcEEEeCCCC--CHHHHHHHHHcCCEEEE--Cccchhh----h---
Confidence 000 001122222221 11456788888863 34567777788876543 6632110 0
Q ss_pred CCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH-HHHHHHHH------Hh
Q 010547 335 DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYG------RK 407 (507)
Q Consensus 335 ~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~------~~ 407 (507)
.....++.++++.|+.+++|||..+.+... .++.. +....... ..
T Consensus 297 ------------~~g~~~~~~~~~~Gv~v~lGtD~~~~~~~d----------------~~~~~~~~~~~~~~~~~~~~~~ 348 (429)
T cd01303 297 ------------GSGLFDVRKLLDAGIKVGLGTDVGGGTSFS----------------MLDTLRQAYKVSRLLGYELGGH 348 (429)
T ss_pred ------------ccCCCCHHHHHHCCCeEEEeccCCCCCCcc----------------HHHHHHHHHHHHHhhccccCCc
Confidence 011224567888999999999976432111 01110 11111111 12
Q ss_pred cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEe-CCCCCcccCCCCCccccCcEEe---eEEEEE
Q 010547 408 YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFEL-DNDHPVHMKHPSISAYLGRRLS---GKVLAT 482 (507)
Q Consensus 408 ~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~V~~v 482 (507)
.+++++++++++|.|||+++|+ +++|+|++||+||||++|.+.+... +.. .+.... .+|+..+... ..|+.|
T Consensus 349 ~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~--~~~~~~-~d~~~~lV~~~~~~~V~~v 425 (429)
T cd01303 349 AKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSATPLLADRM--FRVESL-EEALFKFLYLGDDRNIREV 425 (429)
T ss_pred CCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCCcccccccc--ccccch-hhHHHHHeeeCCCCCeeEE
Confidence 3579999999999999999999 6689999999999999998865322 110 000000 2344444443 459999
Q ss_pred EECC
Q 010547 483 ISRG 486 (507)
Q Consensus 483 ~v~G 486 (507)
||+|
T Consensus 426 ~V~G 429 (429)
T cd01303 426 YVAG 429 (429)
T ss_pred EeCC
Confidence 9998
No 73
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.3e-29 Score=234.97 Aligned_cols=343 Identities=20% Similarity=0.253 Sum_probs=214.8
Q ss_pred EEEEecEEECCCCcee-eeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC----CChh
Q 010547 45 YWLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW----EGFP 119 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~-~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~----~~~~ 119 (507)
++|+|++|+++.++.+ +.|.|+||+|.+|.+ .+.+ .+.+++|.+|.+|.|||||+|+|.+.+..... +.+.
T Consensus 2 ~~~~~~~i~t~~~~~~~~~v~i~dg~I~~i~~-~~~p---~~~e~id~~G~~l~PGfID~hihG~gG~~~~D~~~~~~l~ 77 (380)
T COG1820 2 YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVP-AELP---ADAEIIDLKGALLVPGFIDLHIHGGGGADFMDAGSVETLE 77 (380)
T ss_pred ceeeccEEEcCcceEECcEEEEcCCEEEEEec-CcCC---CcceeecCCCCEecccEEEEeecCcCcccccCccCHHHHH
Confidence 5789999999999775 599999999999998 3333 37899999999999999999999988744432 4577
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc------CceeeEEEeccccCCCcccHHHHHHHHHcCCcEE
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK------RIYVDVGFWGGLVPENAYNASALEALLNAGVLGL 193 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 193 (507)
..++..+++|||+++... -| ...+.+.+.++.+.. ...+.++..+++.... +.|+...
T Consensus 78 ~i~~~~~~~GtTsfLpT~-iT----~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~ls~~-----------kkGAh~~ 141 (380)
T COG1820 78 TMAEAHLRHGTTSFLPTL-IT----ASLEKIKAALRAIREAIAKGGAQILGIHLEGPFLSPE-----------KKGAHNP 141 (380)
T ss_pred HHHHHhhhcCeeeeeeec-cc----CCHHHHHHHHHHHHHHHhccCCceEEEEeecCccCHh-----------hccCCCH
Confidence 788899999999999654 22 334444444433321 2234444444443322 2333322
Q ss_pred EEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHH
Q 010547 194 KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELL 273 (507)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 273 (507)
.....++++++.++++.++..-..+.+.+|.... .+++
T Consensus 142 ---------~~ir~~~~~~~~~~~~~a~g~i~~vTlAPE~~~~---------------------------------~e~i 179 (380)
T COG1820 142 ---------EYIRPPDPEELEQLIAAADGLIKLVTLAPELDGT---------------------------------KELI 179 (380)
T ss_pred ---------HHhCCCCHHHHHHHHhhccCceEEEEECCCCCCC---------------------------------HHHH
Confidence 1123467788888887777633344444443321 2344
Q ss_pred HHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCc----eeEcCC------
Q 010547 274 TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR----FKCAPP------ 343 (507)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~p~------ 343 (507)
..+.+. |..+.+.|.. ...+..+.+.+.|.... .|+....+.+...... ....|.
T Consensus 180 ~~l~~~-------giivs~GHS~---Atye~~~~a~~~Ga~~~-----THlfNaMs~l~hREPGvvGA~L~~~~~~~eiI 244 (380)
T COG1820 180 RLLANA-------GIVVSIGHSN---ATYEQARAAFEAGATFV-----THLFNAMSGLHHREPGVVGAALDNPDVYAEII 244 (380)
T ss_pred HHHHhC-------CeEEEecCcc---ccHHHHHHHHHhCccEE-----EeeccCCCCCCCCCCcccceeecCCCeEEEEE
Confidence 444433 6666666654 34666666667776532 2333333333221110 011111
Q ss_pred ---CCChhhHHHHHHHHhcCCeeEEeCCCCCCChhh----------hccccCCccccCCCCchhhhHHHHHHHHHH-hcC
Q 010547 344 ---IRDAANKEKLWEALMDGHIDMLSSDHSPTVPEL----------KLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYG 409 (507)
Q Consensus 344 ---~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~g 409 (507)
++-....-.+....+-+-.+.+-||..+..... -.+..|.....-++++|....|...++.+. ..+
T Consensus 245 aDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~G~~dg~y~lgg~~V~v~~g~~~~~~GtLAGS~Ltm~~avrn~v~~~~ 324 (380)
T COG1820 245 ADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAAGLPDGEYILGGQTVTVADGARRLEDGTLAGSTLTMDEAVRNLVEWGG 324 (380)
T ss_pred ccCcccCHHHHHHHHhccCCceEEEEEccccccCCCCccEEECCEEEEEECCEEECCCCceeeeeeeHHHHHHHHHHHhC
Confidence 111111111122222234678888875432211 112233333345677777777777777554 457
Q ss_pred CCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEE
Q 010547 410 VTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNL 488 (507)
Q Consensus 410 ls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~ 488 (507)
++++||++|+|.+||++||+ +++|+|++||.||||+||.|- +|..||++|++
T Consensus 325 ~~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~Adlvvld~d~---------------------------~v~~T~i~G~~ 377 (380)
T COG1820 325 ISLAEAVRMASLNPAKALGLDDRLGSIKPGKDADLVVLDDDL---------------------------NVKATWINGEK 377 (380)
T ss_pred CCHHHHHHHhhhhHHHHhCCcCcccccCCCcccCEEEECCCC---------------------------cEEEEEECCEE
Confidence 99999999999999999999 777999999999999999652 79999999999
Q ss_pred EEe
Q 010547 489 VYK 491 (507)
Q Consensus 489 v~~ 491 (507)
+++
T Consensus 378 ~~~ 380 (380)
T COG1820 378 VFN 380 (380)
T ss_pred eeC
Confidence 873
No 74
>PRK09230 cytosine deaminase; Provisional
Probab=99.97 E-value=3.6e-28 Score=244.53 Aligned_cols=366 Identities=17% Similarity=0.209 Sum_probs=214.3
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC---C---CC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---T---EW 115 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~---~---~~ 115 (507)
...++|+|++++++.. ..+|+|+||+|++|++..+.+. .+.++||++|++|+|||||+|+|+..... . ..
T Consensus 3 ~~~~li~~~~~~~~~~--~~~i~i~~g~I~~i~~~~~~~~--~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~~~~~~ 78 (426)
T PRK09230 3 NALMTIKNARLPGKEG--LWQITIEDGKISAIEPQSEASL--EAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQS 78 (426)
T ss_pred CceEEEECcEEcCCCe--eEEEEEECCEEEEecCCCCCCC--CCCceEeCCCCEeccceeEEEEccccceecCCCccCCC
Confidence 4578999999988643 3689999999999998643211 25689999999999999999999975311 0 00
Q ss_pred -------------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc
Q 010547 116 -------------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV 172 (507)
Q Consensus 116 -------------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (507)
+. ....+..++++|||++.++.....+.....+.+.+..+..+....+.+.......
T Consensus 79 ~~l~~~i~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i~a~~~~~ 158 (426)
T PRK09230 79 GTLFEGIERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAFPQEG 158 (426)
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEEEeccCcc
Confidence 00 1223456789999999988621111111123333333333333333333221110
Q ss_pred -CCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCC---CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcC
Q 010547 173 -PENAYNASALEALLNAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 248 (507)
Q Consensus 173 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 248 (507)
...+...+.+.+..+.+..-+.. . +..+. .+++.+..+++.|++++.++.+|+.+....
T Consensus 159 ~~~~~~~~~~l~~a~~~~~~~vg~-~-----p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~----------- 221 (426)
T PRK09230 159 ILSYPNGEALLEEALRLGADVVGA-I-----PHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDE----------- 221 (426)
T ss_pred ccCCccHHHHHHHHHHcCCCEEeC-C-----CCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCc-----------
Confidence 11122334555555554432221 1 11111 247889999999999999999998643320
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh-----HHHHHHHHHHhCCCCEEEeccccc
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-----SSLDLLMEAKTNGDSITVETCPHY 323 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~-----~~~~~i~~~~~~g~~i~~~~~~~~ 323 (507)
.........++..+.+. +.++.+.|+..-. ...+.++.+++.|+.+.. ||..
T Consensus 222 ----------------~~~~~~~~~~~~~~~gl-----~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~--cP~s 278 (426)
T PRK09230 222 ----------------QSRFVETVAALAHREGM-----GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVA--NPLV 278 (426)
T ss_pred ----------------chHHHHHHHHHHHHhCC-----CCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEE--Ccch
Confidence 00112334444454422 5568888887531 256678888888876544 6642
Q ss_pred ccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH
Q 010547 324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS 403 (507)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 403 (507)
-..... .....| ......++.+++++|+.+++|||+...... ..+....++. +.....
T Consensus 279 n~~l~~-------~~~~~p---~~~g~~pi~~l~~aGv~V~lGTD~~~d~~~-----------~~~~~d~~~~-~~~~~~ 336 (426)
T PRK09230 279 NIHLQG-------RFDTYP---KRRGITRVKEMLEAGINVCFGHDDVFDPWY-----------PLGTANMLQV-LHMGLH 336 (426)
T ss_pred hhhhcC-------CCCCCC---CCCCCcCHHHHHHCCCeEEEecCCCCCCCc-----------CCCCCCHHHH-HHHHHH
Confidence 111000 000011 112234567889999999999996432110 0011122211 111110
Q ss_pred HHHhcCC-CHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEE
Q 010547 404 YGRKYGV-TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLAT 482 (507)
Q Consensus 404 ~~~~~gl-s~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 482 (507)
....... +++++++|+|.|||++||+++.| |++||.||||++|.+++..+. +. ...+..|
T Consensus 337 ~~~~~~~~~~~~~l~maT~~gA~alg~~~~g-le~G~~ADlv~~~~~~~~~~~------~~------------~~~~~~v 397 (426)
T PRK09230 337 VCQLMGYGQINDGLNLITTHSARTLNLQDYG-IEVGNPANLIILPAENGFDAV------RR------------QVPVRYS 397 (426)
T ss_pred HHhhCChhhHHHHHHHHhcchhHHhCCCCcC-CCCCCcCCEEEEeCCCHHHHH------hc------------cCCceEE
Confidence 1111112 36899999999999999995577 999999999999975533221 11 1258999
Q ss_pred EECCEEEEec
Q 010547 483 ISRGNLVYKE 492 (507)
Q Consensus 483 ~v~G~~v~~~ 492 (507)
+++|++|+..
T Consensus 398 ~~~G~~v~~~ 407 (426)
T PRK09230 398 IRHGKVIAET 407 (426)
T ss_pred EECCEEEecc
Confidence 9999999965
No 75
>PRK08418 chlorohydrolase; Provisional
Probab=99.97 E-value=2.3e-29 Score=252.00 Aligned_cols=366 Identities=17% Similarity=0.103 Sum_probs=198.7
Q ss_pred EEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC------
Q 010547 45 YWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------ 114 (507)
Q Consensus 45 ~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~------ 114 (507)
++|+|++|++++. +.+++|+|+ |+|++||+..+.+..+++.++||+.|++|+|||||+|+|+.......
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~~~ 80 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYPNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDYGD 80 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCCCCcEEecCCcEEccCccccccchhhhhhccccCCCc
Confidence 5799999998773 357899999 99999998543221122456999999999999999999996431110
Q ss_pred ---C-------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEE-ecccc
Q 010547 115 ---W-------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGF-WGGLV 172 (507)
Q Consensus 115 ---~-------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~ 172 (507)
| +. ......+++++||||+.++. .. + .. .++... +...-++. ..+..
T Consensus 81 ~~~wl~~~~~~~~~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~-~~-~-----~~----~~a~~~~GiR~~~~~~~~~~~ 149 (408)
T PRK08418 81 FIPWLGSVINHREDLLEKCKGALIQQAINEMLKSGVGTIGAIS-SF-G-----ID----LEICAKSPLRVVFFNEILGSN 149 (408)
T ss_pred hHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHhcCceEEEEee-cc-h-----hh----HHHHHhcCCeEEEEeeeeCCC
Confidence 1 00 01233467999999999774 11 1 11 122222 11111111 00111
Q ss_pred CCC-cccHH-HHHHHHHc---CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc-cchhhhhcccC
Q 010547 173 PEN-AYNAS-ALEALLNA---GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVKLEDD 246 (507)
Q Consensus 173 ~~~-~~~~~-~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~~~~~ 246 (507)
... ....+ .+...... ....+...+.+ +....++++.++++.+.|++++.++.+|+.+.. +.+......+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ap---h~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~ 226 (408)
T PRK08418 150 ASAVDELYQDFLARFEESKKFKSKKFIPAIAI---HSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGW 226 (408)
T ss_pred ccchhhhHHHHHHHHHhhhcccCCceeEEEeC---CCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCc
Confidence 100 01111 11121110 11112222222 333467899999999999999999999986533 22222211110
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccc
Q 010547 247 TLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF 326 (507)
Q Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~ 326 (507)
........+....|.. ..++.+..+ . +.+..+.|+.+ -+.+.++.+++.|..+. +||..-
T Consensus 227 -~~~~~~~~~~~~~~~~---~pv~~l~~~-g---------~~~~~~~H~~~--~~~~di~~la~~g~~v~--~cP~sn-- 286 (408)
T PRK08418 227 -FKKFFEKFLKEPKPLY---TPKEFLELF-K---------GLRTLFTHCVY--ASEEELEKIKSKNASIT--HCPFSN-- 286 (408)
T ss_pred -hhhhhhhhcccccccC---CHHHHHHHh-C---------CCCeEEEeccc--CCHHHHHHHHHcCCcEE--ECHhHH--
Confidence 0000000000000000 011112211 1 23467777776 34456666667776554 466311
Q ss_pred cccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH
Q 010547 327 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR 406 (507)
Q Consensus 327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 406 (507)
. .. .....++.++++.|+.+++|||+.+++...++ ++. +........
T Consensus 287 ----~-------~l------g~g~~p~~~~~~~Gi~v~lGtD~~~~~~~~~~---------------~~e-m~~~~~~~~ 333 (408)
T PRK08418 287 ----R-------LL------SNKALDLEKAKKAGINYSIATDGLSSNISLSL---------------LDE-LRAALLTHA 333 (408)
T ss_pred ----H-------Hh------cCCCccHHHHHhCCCeEEEeCCCCCCCCCcCH---------------HHH-HHHHHHHhc
Confidence 0 00 01123456788999999999997654332211 111 111010000
Q ss_pred --hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEE
Q 010547 407 --KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATIS 484 (507)
Q Consensus 407 --~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v 484 (507)
....+++++++++|.|||++||++ .|+|++||.||||++|.+.+. .+.. +.|+..+.....|..|||
T Consensus 334 ~~~~~~~~~~~l~~aT~~gA~alg~~-~G~l~~G~~ADlv~~d~~~~~-~~~~---------~~~~~~~~~~~~v~~v~v 402 (408)
T PRK08418 334 NMPLLELAKILLLSATRYGAKALGLN-NGEIKEGKDADLSVFELPEEC-TKKE---------QLPLQFILHAKEVKKLFI 402 (408)
T ss_pred cCCccccHHHHHHHHHHHHHHHhCCC-CccccCCCccCEEEEeCCCCC-CChh---------HhHHHHHhccCccceEEE
Confidence 111346899999999999999995 799999999999999976311 1101 222222223347999999
Q ss_pred CCEEE
Q 010547 485 RGNLV 489 (507)
Q Consensus 485 ~G~~v 489 (507)
+|++|
T Consensus 403 ~G~~v 407 (408)
T PRK08418 403 GGKEV 407 (408)
T ss_pred CCEEc
Confidence 99987
No 76
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.97 E-value=4.7e-28 Score=245.52 Aligned_cols=370 Identities=20% Similarity=0.228 Sum_probs=219.0
Q ss_pred CCCCcceEEEEecEEECC------------CCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeeccc
Q 010547 38 SLLPYNQYWLTSKRIVTP------------KGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105 (507)
Q Consensus 38 ~~~~~~~~~i~n~~i~~~------------~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~ 105 (507)
+...+..++|+|+++-+. ++....+|.|+||||++|++....+ .+.++||++|++|+|||||+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~---~~~~~id~~g~~v~Pg~id~H~ 82 (438)
T PRK07583 6 SLPESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAP---DELPAVDLKGRMVWPCFVDMHT 82 (438)
T ss_pred cCCCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCC---CCCceecCCCCcccCCccccee
Confidence 345577889999986432 2345679999999999999876422 2578999999999999999999
Q ss_pred ccCCCCCC-------------------------CCCC----hhHHHHHHHhCCceEEEeCCCCCCCC--CCCHHHHHHHH
Q 010547 106 HLDDPGRT-------------------------EWEG----FPSGTKAAAAGGITTLIDMPLNSDPS--TISTETLKLKV 154 (507)
Q Consensus 106 H~~~~~~~-------------------------~~~~----~~~~~~~~l~~GvTt~~~~~~~~~p~--~~~~~~~~~~~ 154 (507)
|+...... +.++ +....+.++.+|+|+++.+. ...+. ....+.+.+..
T Consensus 83 Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~v-d~~~~~~~~~~~~i~~~~ 161 (438)
T PRK07583 83 HLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHL-DSFAPQAAISWEVFAELR 161 (438)
T ss_pred ccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeee-ccCCCCcccHHHHHHHHH
Confidence 98543100 0111 33445677899999777665 22121 22233343334
Q ss_pred HHHhcCceeeEEEeccccCCCcccHHHHHHHH-Hc-CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 010547 155 DAAEKRIYVDVGFWGGLVPENAYNASALEALL-NA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (507)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 232 (507)
+..............++........+++.+.. +. |..+.+.++. ...++.+.++++.|+++|.++.+|+.
T Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~~~~~eL~~~v~~~~gv~g~~~~~~--------~~~d~~l~~i~~lA~~~G~~v~vH~~ 233 (438)
T PRK07583 162 EAWAGRIALQAVSLVPLDAYLTDAGERLADLVAEAGGLLGGVTYMN--------PDLDAQLDRLFRLARERGLDLDLHVD 233 (438)
T ss_pred HHhhccCeEEEEEecChhhccCchHHHHHHHHHHcCCEEeCCCCCC--------CCHHHHHHHHHHHHHHhCCCcEEeEC
Confidence 33333332222222222221222224444444 33 4444433221 12568899999999999999999995
Q ss_pred CcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-----hHHHHHHHH
Q 010547 233 MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLME 307 (507)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~-----~~~~~~i~~ 307 (507)
+... + ....+....+...+.+. ..++++.|+..- ....+.++.
T Consensus 234 E~~~------------------------~---~~~~l~~~~~~~~~~G~-----~~~v~i~H~~~l~~~~~~~~~~~i~~ 281 (438)
T PRK07583 234 ETGD------------------------P---ASRTLKAVAEAALRNGF-----EGKVTCGHCCSLAVQPEEQAQATIAL 281 (438)
T ss_pred CCCC------------------------c---hHHHHHHHHHHHHHhCC-----CCCEEEEeccchhcCCHHHHHHHHHH
Confidence 3221 0 11112333333333311 235888888642 122467888
Q ss_pred HHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCcccc
Q 010547 308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKA 387 (507)
Q Consensus 308 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~ 387 (507)
+++.|+.+.. ||........... ...|..+ ...++.++++.|+.+++|||+.... |. .
T Consensus 282 la~~gv~vv~--~P~~~~~l~~~~~------~~~p~~~---~~~~v~~l~~aGV~valGtD~~~d~----------~~-p 339 (438)
T PRK07583 282 VAEAGIAIVS--LPMCNLYLQDRQP------GRTPRWR---GVTLVHELKAAGIPVAVASDNCRDP----------FY-A 339 (438)
T ss_pred HHHcCCeEEE--CcchhhhhcCCCc------CCCCCCC---CcchHHHHHHCCCeEEEEeCCCCCC----------CC-C
Confidence 8888877654 5643211110000 0012111 2235677888899999999975311 10 1
Q ss_pred CCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCC
Q 010547 388 WGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSI 467 (507)
Q Consensus 388 ~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~ 467 (507)
.+....++.... ... ....+.+++++++++|.|||+++|++++|+|++|+.||||++|.++..++.
T Consensus 340 ~g~~~~~~~~~~-a~~-~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i~~G~~ADlvv~d~~~~~~~~------------ 405 (438)
T PRK07583 340 YGDHDMLEVFRE-AVR-ILHLDHPYDDWPAAVTTTPADIMGLPDLGRIAVGAPADLVLFKARSFSELL------------ 405 (438)
T ss_pred CCCcCHHHHHHH-HHH-HHhcCCcHHHHHHHHhHHHHHHcCCCCCCCcCCCCCCCEEEEcCCCHHHHH------------
Confidence 111222222111 111 122367899999999999999999954899999999999999988644321
Q ss_pred ccccCcEEeeEEEEEEECCEEEEecC
Q 010547 468 SAYLGRRLSGKVLATISRGNLVYKEG 493 (507)
Q Consensus 468 ~~~~~~~~~~~V~~v~v~G~~v~~~g 493 (507)
...+.+..||++|++|.+..
T Consensus 406 ------~~~~~~~~V~~~G~~v~~~~ 425 (438)
T PRK07583 406 ------SRPQSDRIVLRAGKPIDTTL 425 (438)
T ss_pred ------hcCCCccEEEECCEEecccC
Confidence 11124678999999987654
No 77
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.97 E-value=2.6e-28 Score=239.70 Aligned_cols=328 Identities=23% Similarity=0.309 Sum_probs=222.0
Q ss_pred CCcceEEEEecEEECC--CCceeeeEEEeCCEEEEe-ecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTP--KGVISGAVEIKEGNIISI-VSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE 116 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~--~~~~~~~I~I~dG~I~~V-g~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~ 116 (507)
+...+++++||+++|. ..+..++|+|.+|+|+.| ++.. +++.++||+.|++|.|||||.|.|.......
T Consensus 21 ~~~adlv~~ng~ivdv~~gei~~~dIaI~~grI~~v~~~~~-----~e~~~~iDa~g~yivPGfID~H~HIESSm~t--- 92 (584)
T COG1001 21 RAKADLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEYR-----AEATEVIDAAGRYIVPGFIDAHLHIESSMLT--- 92 (584)
T ss_pred CCCCCEEEECCEEEEeeeccEEeeeEEEECCEEEEeecCcC-----cccceeecCCCCEeccceeecceeccccccC---
Confidence 5678999999999996 337799999999999995 3332 2378999999999999999999998875443
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc--------ccHHHHHHHHH-
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--------YNASALEALLN- 187 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~- 187 (507)
....++..+.+||||++.-| ...-.....+-+...++.+.. .+++++++.+...... -..+.++++..
T Consensus 93 -P~~FA~~Vlp~GtTtvV~DP-HEIaNV~G~~Gi~~ml~~a~~-~pl~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~ 169 (584)
T COG1001 93 -PSEFARAVLPHGTTTVVSDP-HEIANVLGEDGIRFMLDEAKE-TPLKVYVMLPSCVPATPFETSGAELTAEDIKELLEH 169 (584)
T ss_pred -HHHHHHHhhccCceEEeeCc-HHHHhhccHHHHHHHHHHHhh-CCeEEEEecccCccCCccccCCceecHHHHHHHhhC
Confidence 45567788999999999654 222234556777777777664 4666666544322111 14466777776
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (507)
-.+.++...|.+++- ...++.+-..++.+++.++++..|+......
T Consensus 170 p~Vigl~E~Mn~pgV----i~~D~~~l~kl~a~~~~~k~VdGHapgl~g~------------------------------ 215 (584)
T COG1001 170 PEVIGLGEMMNFPGV----IEGDPDMLAKLEAARKAGKPVDGHAPGLSGK------------------------------ 215 (584)
T ss_pred CCccchhhhcCCchh----ccCCHHHHHHHHHHHHcCCeecccCCCCChH------------------------------
Confidence 456677776655432 3466778888899999999999999554320
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
.+...+.. | +...|=.+ ...+.++++ +.|..+..=- ++ ..
T Consensus 216 ~Ln~Y~aa-----------G--i~tDHE~~--t~EEa~~kl-r~Gm~i~iRe---------------GS---------~a 255 (584)
T COG1001 216 ELNAYIAA-----------G--ISTDHEST--TAEEALEKL-RLGMKIMIRE---------------GS---------AA 255 (584)
T ss_pred HHHHHHhc-----------C--CCcCcccC--CHHHHHHHH-hCCcEEEEEc---------------Cc---------hh
Confidence 01111111 1 22333332 223333333 4454432210 00 11
Q ss_pred hhHHHHHHHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhH
Q 010547 348 ANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAK 425 (507)
Q Consensus 348 ~~~~~~~~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~ 425 (507)
.+...+.+++.+ | -.++++||....+.... .| .+..+.+.+.+.|++|.+|++|+|.|||+
T Consensus 256 ~dl~~l~~~i~e~~~~~~~lcTDD~~p~dl~~---eG--------------hld~~vR~Ai~~Gv~p~~a~qmAtiN~A~ 318 (584)
T COG1001 256 KDLAALLPAITELGSRRVMLCTDDRHPDDLLE---EG--------------HLDRLVRRAIEEGVDPLDAYQMATINPAE 318 (584)
T ss_pred hhHHHHHHHHhhcCCceEEEECCCCChhHhhh---cC--------------CHHHHHHHHHHcCCCHHHHHHHHhcCHHH
Confidence 223333444443 3 35789999775542111 11 16677888999999999999999999999
Q ss_pred HhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCc
Q 010547 426 LAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 426 ~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
.+|+++.|.|+||+.||||+++ |- ++. .|..|+++|+.|.++|+
T Consensus 319 ~~gl~~~G~iAPG~~ADlvi~~-DL------------~~~------------~v~~V~~~G~~v~~~g~ 362 (584)
T COG1001 319 HYGLDDLGLIAPGRRADLVILE-DL------------RNF------------KVTSVLIKGRVVAEDGK 362 (584)
T ss_pred HcCCcccccccCCccccEEEEc-cc------------ccC------------ceeEEEECCEEEecCCc
Confidence 9999779999999999999998 31 122 68999999999999997
No 78
>PRK07572 cytosine deaminase; Validated
Probab=99.97 E-value=1.2e-27 Score=241.83 Aligned_cols=364 Identities=16% Similarity=0.150 Sum_probs=208.2
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC---CCC------
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT------ 113 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~---~~~------ 113 (507)
++++|+|++|+++. ...+|+|+||+|++|++..+.. ..++||++|++|+|||||+|+|+... +..
T Consensus 2 ~~~~i~~~~i~~~~--~~~~i~i~~g~I~~v~~~~~~~----~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~~~~~g 75 (426)
T PRK07572 2 FDLIVRNANLPDGR--TGIDIGIAGGRIAAVEPGLQAE----AAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNASG 75 (426)
T ss_pred CcEEEECeEECCCC--eeEEEEEECCEEEEecCCCCCC----cCceEeCCCCEEcccceehhhCcchhhccCCCCCCCCC
Confidence 35789999999865 3678999999999999864321 46899999999999999999999642 110
Q ss_pred ----------------CCCC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe--ccc
Q 010547 114 ----------------EWEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW--GGL 171 (507)
Q Consensus 114 ----------------~~~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 171 (507)
+.+. ....++.++++|||++.++.....+.......+.+..........+..... .+.
T Consensus 76 ~l~e~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~g~ 155 (426)
T PRK07572 76 TLLEGIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLVAFPQDGV 155 (426)
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEEeccChhh
Confidence 0111 223456778999999998741112222122222222221122221112111 111
Q ss_pred cCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcc
Q 010547 172 VPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (507)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 251 (507)
. ..+...+.+++..+.|+.-+...... ......+.+.++.++++|++++.++.+|+.+...
T Consensus 156 ~-~~~~~~~~~~~~l~~g~d~iGg~p~~---~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~--------------- 216 (426)
T PRK07572 156 L-RSPGAVDNLERALDMGVDVVGGIPHF---ERTMADGAESVRLLCEIAAERGLRVDMHCDESDD--------------- 216 (426)
T ss_pred c-cCccHHHHHHHHHHcCCCEEeCCCCC---ccccchHHHHHHHHHHHHHHcCCCeEEEECCCCC---------------
Confidence 1 11234556777777776555321100 1001122489999999999999999999944321
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-----hHHHHHHHHHHhCCCCEEEecccccccc
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPHYLAF 326 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~-----~~~~~~i~~~~~~g~~i~~~~~~~~~~~ 326 (507)
.....+....+...+.+. .+ .+.+.|+..- ....+.++.+++.|+.+.. ||.....
T Consensus 217 ------------~~~~~~~~~~~~~~~~G~----~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~--~P~~n~~ 277 (426)
T PRK07572 217 ------------PLSRHIETLAAETQRLGL----QG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIA--NPLINIT 277 (426)
T ss_pred ------------hhHHHHHHHHHHHHHhCC----CC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEE--Cchhhhh
Confidence 011122233333333321 13 5777888531 1345678888888876654 5521110
Q ss_pred cccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH
Q 010547 327 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR 406 (507)
Q Consensus 327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 406 (507)
. .... ...| .......+.++++.|+.+++|||+... . | ...++...++... ....
T Consensus 278 l----~~~~---~~~~---~~~g~~~v~~l~~~GV~v~lGtD~~~~-~---------~-~~~~~~~~~e~~~----~~~~ 332 (426)
T PRK07572 278 L----QGRH---DTYP---KRRGMTRVPELMAAGINVAFGHDCVMD-P---------W-YSLGSGDMLEVAH----MGLH 332 (426)
T ss_pred h----cCCC---CCCC---CCCCCcCHHHHHHCCCcEEEecCCCCC-C---------C-CCCCCCCHHHHHH----HHHH
Confidence 0 0000 0001 112234567888899999999997421 0 0 0001112222111 1111
Q ss_pred hcCCC----HHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEE
Q 010547 407 KYGVT----LEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLAT 482 (507)
Q Consensus 407 ~~gls----~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 482 (507)
..+++ +.++++++|.|||++||+++.| |++||.||||++|.+++. +.+...+.+..|
T Consensus 333 ~~~~~~~~~l~~~l~~aT~~~A~~lgl~~~g-i~~G~~ADlvl~d~~~p~------------------e~i~~~~~~~~V 393 (426)
T PRK07572 333 VAQMTGQDAMRACFDAVTVNPARIMGLEGYG-LEPGCNADLVLLQARDPI------------------EAIRLRAARLAV 393 (426)
T ss_pred HHcCCCHHHHHHHHHHhhcchHHhhCCCCcC-CCCCCcCCEEEEeCCCHH------------------HHHHhcCCceEE
Confidence 22233 4567789999999999995567 999999999999953221 112222368999
Q ss_pred EECCEEEEecCc
Q 010547 483 ISRGNLVYKEGN 494 (507)
Q Consensus 483 ~v~G~~v~~~g~ 494 (507)
|++|++|++...
T Consensus 394 ~~~G~~v~~~~~ 405 (426)
T PRK07572 394 IRRGKVIARTPP 405 (426)
T ss_pred EECCEEEeccCC
Confidence 999999997743
No 79
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=99.97 E-value=2.8e-28 Score=246.06 Aligned_cols=370 Identities=17% Similarity=0.169 Sum_probs=216.1
Q ss_pred ceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC------
Q 010547 43 NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------ 113 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~------ 113 (507)
..++|+|..++..++ +.++++.|+||+|+.|++..+.+ .+.+++|++|++|+|||||+|+|+......
T Consensus 2 ~~~~i~~~~~~~~d~~~~~~~~~~~i~~g~I~~ig~~~~~~---~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~~~~ 78 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGRIEDGDLVIEDGKIVAIGANAEGP---PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLADDL 78 (421)
T ss_pred cceeeeCcEEeecCcccceeeeeEEEcCCEEEEeCCcCCCC---CCceeecCCCCEeccCccccccchHHHHHhhhhccc
Confidence 456888888887644 35799999999999999987654 268999999999999999999998542111
Q ss_pred ---CC---------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecc-
Q 010547 114 ---EW---------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG- 170 (507)
Q Consensus 114 ---~~---------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (507)
.| +. .......++++|||++..+. .. .........+.......+..........
T Consensus 79 ~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~-~~--~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 79 PLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHV-DV--VAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred chHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCcccccccc-ch--hhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 11 01 12334567899999976553 11 0011111222222222222222222111
Q ss_pred c----cCCCc---ccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc-cchhhhh
Q 010547 171 L----VPENA---YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVK 242 (507)
Q Consensus 171 ~----~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~ 242 (507)
+ ....+ ...+.++++...+...+.. .+.....++++.++.+.+++++++.++++|+.+.. .+.....
T Consensus 156 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~ 230 (421)
T COG0402 156 FPDPGAETDEELEETEELLREAHGLGRDVVGL-----APHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLE 230 (421)
T ss_pred CCcccccchHHHHHHHHHHHHHhcCCCeeEEE-----ecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHh
Confidence 1 11111 1235566666666333322 11334578999999999999999999999985433 2222221
Q ss_pred cccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccc
Q 010547 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~ 322 (507)
+.+ .+-.+...+.+ .-+.+..+.|+.+. +.+.+..+++.|+.+. +||.
T Consensus 231 ~~g------------------------~~~~~~~~~~g----~l~~~~~~~H~~~~--~~~e~~~l~~~g~~v~--~cP~ 278 (421)
T COG0402 231 PYG------------------------ARPVERLDLLG----LLGSHTLLAHCVHL--SEEELELLAESGASVV--HCPR 278 (421)
T ss_pred hcC------------------------CCHHHHHHHcC----CCCCCeEEEEeccC--CHHHHHHHhhCCCeEE--ECcc
Confidence 111 01111111110 01355677777663 3334444557776554 4773
Q ss_pred cccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHH
Q 010547 323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 402 (507)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 402 (507)
. ++... ....++.+++..|+++++|||...++...+++. +......+
T Consensus 279 s------N~~L~-------------sG~~p~~~~~~~gv~v~~gTD~~~~~~~~d~l~--------------~~~~a~~l 325 (421)
T COG0402 279 S------NLKLG-------------SGIAPVRRLLERGVNVALGTDGAASNNVLDMLR--------------EMRTADLL 325 (421)
T ss_pred h------hcccc-------------CCCCCHHHHHHcCCCEEEecCCccccChHHHHH--------------HHHHHHHH
Confidence 1 11111 111235678889999999999987765332211 11111122
Q ss_pred HHHHhcCCCHH---HHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEE
Q 010547 403 SYGRKYGVTLE---QLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKV 479 (507)
Q Consensus 403 ~~~~~~gls~~---~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 479 (507)
........+.. ++++++|.|+|++||+.++|+|++|+.||||++|.+.+...... + .+.+.-......|
T Consensus 326 ~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~~G~le~G~~ADlvvld~~~~~~~~~~-------~-~~~~v~~~~~~~v 397 (421)
T COG0402 326 QKLAGGLLAAQLPGEALDMATLGGAKALGLDDIGSLEVGKKADLVVLDASAPHLAPLR-------P-VSRLVFAAGGKDV 397 (421)
T ss_pred HHhhcCCCcccchHHHHHHHHhhHHHHcCCcccCCcccccccCEEEEcCCCCcccccc-------H-HHHHHHhcCCCce
Confidence 22222121111 38999999999999987799999999999999999875332111 1 1112222222369
Q ss_pred EEEEECCEEEEecCccc
Q 010547 480 LATISRGNLVYKEGNHA 496 (507)
Q Consensus 480 ~~v~v~G~~v~~~g~~~ 496 (507)
..||++|+.++.+|++.
T Consensus 398 ~~v~~~g~~v~~~~~~~ 414 (421)
T COG0402 398 DRVLVDGRLVMEDGRLL 414 (421)
T ss_pred eEEEECCEEEEEcceeh
Confidence 99999999999998876
No 80
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=99.97 E-value=4.4e-28 Score=246.43 Aligned_cols=361 Identities=16% Similarity=0.145 Sum_probs=200.5
Q ss_pred EEEEecEEECCCCc-eeeeEEEe-CCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---------
Q 010547 45 YWLTSKRIVTPKGV-ISGAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------- 113 (507)
Q Consensus 45 ~~i~n~~i~~~~~~-~~~~I~I~-dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~--------- 113 (507)
+.++|+++ ++++ .+++|+|+ ||+|++||+....+ ++. +..|++|+|||||+|+|+.....+
T Consensus 4 ~~~~~~~~--~~~~~~~~~i~I~~~g~I~~vg~~~~~~---~~~---~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~~~~ 75 (455)
T TIGR02022 4 YWAERALL--PDGWAEGVRIAVAADGRILAIETGVPAA---PGA---ERLSGPLLPGLANLHSHAFQRAMAGLAEVAGSG 75 (455)
T ss_pred hhHHhccC--CCccccCceEEEecCCEEEEecCCCCcc---ccc---ccCCCEEccCCcccCcchhhHhhcCCcccccCC
Confidence 45667766 4443 47899999 99999999864321 122 245889999999999999652100
Q ss_pred -----CC-------------CCh----hHHHHHHHhCCceEEEeCCCCCCC------CCCCHHHHHHHHHHHhc-Cceee
Q 010547 114 -----EW-------------EGF----PSGTKAAAAGGITTLIDMPLNSDP------STISTETLKLKVDAAEK-RIYVD 164 (507)
Q Consensus 114 -----~~-------------~~~----~~~~~~~l~~GvTt~~~~~~~~~p------~~~~~~~~~~~~~~~~~-~~~~~ 164 (507)
.| +.+ ...+.+++++||||+.++. ...+ .....+......++... +....
T Consensus 76 ~~~l~~w~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~R~~ 154 (455)
T TIGR02022 76 GDSFWTWRELMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFH-YLHHAPDGTPYADPAEMAERIAAAAADAGIGLT 154 (455)
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeee-eecccCCCccccchhhhHHHHHHHHHHhCCeEE
Confidence 01 001 1234567899999999863 1111 11112223344444432 22222
Q ss_pred EE--Eec--c---ccCCC---------cccHHHHHHHHH----cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 010547 165 VG--FWG--G---LVPEN---------AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224 (507)
Q Consensus 165 ~~--~~~--~---~~~~~---------~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 224 (507)
+. .+. . ..... ....+..+.+.+ .+. +...+.+ .....++++.++++.+ +++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p---~~~~~~s~e~l~~~~~-a~~~g 228 (455)
T TIGR02022 155 LLPVFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAAQPA--AVLGLAP---HSLRAVTPEQLAAVLQ-ASDRQ 228 (455)
T ss_pred eeeeeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhccCCc--eEEEEec---CCCCcCCHHHHHHHHH-HHhCC
Confidence 21 111 0 11100 001111222221 222 2222222 2334678999999999 88999
Q ss_pred CcEEEecCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHH
Q 010547 225 RPLLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLD 303 (507)
Q Consensus 225 ~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~ 303 (507)
.++.+|+.+.. .+.......+ ..-++...+.+ ..+.++.+.|+..- +.+
T Consensus 229 ~~v~~H~~e~~~e~~~~~~~~G------------------------~~~v~~l~~~g----~l~~~~~~~H~~~l--~~~ 278 (455)
T TIGR02022 229 APVHIHVAEQQKEVDDCLAWSG------------------------RRPVEWLLDHG----PVDARWCLVHATHL--TDE 278 (455)
T ss_pred CceEEEECCChHHHHHHHHHhC------------------------CCHHHHHHHcC----CCCCCEEEEEeecC--CHH
Confidence 99999995322 1111000000 00112222211 11556777787763 234
Q ss_pred HHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC-ChhhhccccC
Q 010547 304 LLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT-VPELKLLDEG 382 (507)
Q Consensus 304 ~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~-~~~~~~~~~~ 382 (507)
.++.+++.|+.+. +||... . . ......++.+++++|+.+++|||.... ++...+
T Consensus 279 d~~~la~~g~~v~--~~P~sn------~-------~------lg~g~~pi~~l~~~Gv~v~lGTD~~~~~d~~~~m---- 333 (455)
T TIGR02022 279 ETALLARSGAVAG--LCPTTE------A-------N------LGDGIFPAVDFVAAGGRFGIGSDSHVVIDVAEEL---- 333 (455)
T ss_pred HHHHHHHcCCeEE--EChhhh------c-------c------ccCCCCCHHHHHHCCCeEEEECCCCCCCCHHHHH----
Confidence 6777777786654 466421 0 0 001123456788899999999996431 221110
Q ss_pred CccccCCCCchhhhHHHHHHHHHH----------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCce
Q 010547 383 NFLKAWGGISSLQFVLPVTWSYGR----------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEF 452 (507)
Q Consensus 383 ~~~~~~~~~~~~~~~l~~~~~~~~----------~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~ 452 (507)
.......... ...++++++++++|.|||++||+ +.|+|++||+||||++|.+.+.
T Consensus 334 --------------~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~~GsLe~Gk~ADlvvld~~~~~ 398 (455)
T TIGR02022 334 --------------RQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-ATGGLRAGARADFLTLDGDHPY 398 (455)
T ss_pred --------------HHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-CCCccCCCCCcCEEEEeCCCcc
Confidence 0111111111 12356789999999999999999 5899999999999999987544
Q ss_pred EeCCCCCcccCCCCCccccCcEE---eeEEEEEEECCEEEEecCcccCC
Q 010547 453 ELDNDHPVHMKHPSISAYLGRRL---SGKVLATISRGNLVYKEGNHAPA 498 (507)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~---~~~V~~v~v~G~~v~~~g~~~~~ 498 (507)
..+.. . .+++..+.. ...|..|||+|++||++|+++..
T Consensus 399 ~~~~~-------~-~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~~~ 439 (455)
T TIGR02022 399 LAGAL-------G-DSLLDRWLFAGGGAAVRDVWVGGRWVVRDGRHALR 439 (455)
T ss_pred cCCCC-------c-hhHHHHHhhcCCCCCccEEEECCEEEEECCccccH
Confidence 32211 0 122221222 24699999999999999999754
No 81
>PRK14085 imidazolonepropionase; Provisional
Probab=99.96 E-value=7.6e-28 Score=240.17 Aligned_cols=313 Identities=19% Similarity=0.179 Sum_probs=188.1
Q ss_pred ceEEEEe-cEEECCCC---------ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 43 NQYWLTS-KRIVTPKG---------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 43 ~~~~i~n-~~i~~~~~---------~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
++++|+| +.|++.+. +.+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+.....
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~---~~~~~iD~~g~~v~PGlId~H~Hl~~~~~ 77 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAP---AADERVDAGGRAVLPGFVDSHSHLVFAGD 77 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCC---CCCeEEeCCCCEEecCeEecCcCccccCC
Confidence 3578999 59999752 34789999999999999864333 26789999999999999999999964321
Q ss_pred CC-----------C-----------------CC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC
Q 010547 113 TE-----------W-----------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR 160 (507)
Q Consensus 113 ~~-----------~-----------------~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 160 (507)
.. + +. ....+..++++||||+.+.. .. .....+.++. .+... +
T Consensus 78 r~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~-~~--~~~~~~~~~~-~~~~~-~ 152 (382)
T PRK14085 78 RSAEFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKT-GY--GLTVEDEARS-ARIAA-E 152 (382)
T ss_pred hhHHHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCC-cC--CCCHHHHHHH-HHHHH-H
Confidence 10 0 11 11234577899999999875 21 1111122221 11111 1
Q ss_pred ceeeEEEecc--ccC---CCc-ccHHH----HHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 010547 161 IYVDVGFWGG--LVP---ENA-YNASA----LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (507)
Q Consensus 161 ~~~~~~~~~~--~~~---~~~-~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 230 (507)
........++ ... ..+ ...+. +....+..+..++.+... ...++++++++++.|+++|.++.+|
T Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~idi~~~~------~~~~~~~l~~~~~~a~~~g~~v~~H 226 (382)
T PRK14085 153 FTDEVTFLGAHVVPPEYAGDADEYVDLVCGPMLDAVAPHARWIDVFCER------GAFDEDQSRRVLTAGRAAGLGLRVH 226 (382)
T ss_pred hhhcceeeccccCCcccCCCHHHHHHHHHHHHHHHHHHhCCeEEEEecC------CCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 1111111110 000 011 11111 113333345555554321 2467899999999999999999999
Q ss_pred cCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHh
Q 010547 231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT 310 (507)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~ 310 (507)
+..... ...+..+.++ |. ..+.|+.. -..+.++.+++
T Consensus 227 ~~~~~~-----------------------------~~~v~~~~~~-----------g~-~~i~H~~~--l~~~~~~~la~ 263 (382)
T PRK14085 227 GNQLGP-----------------------------GPGVRLAVEL-----------GA-ASVDHCTY--LTDADVDALAG 263 (382)
T ss_pred eCcccC-----------------------------ChHHHHHHHc-----------CC-CcHHHhCC--CCHHHHHHHHH
Confidence 853110 0012222221 11 12455554 23346677777
Q ss_pred CCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCC
Q 010547 311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGG 390 (507)
Q Consensus 311 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~ 390 (507)
.|+.++ +||..... ......++.++++.|+++++|||+.+.....
T Consensus 264 ~gv~~~--~~P~~~~~-------------------~~~~~~~~~~l~~aGv~v~lgsD~~~~~~~~-------------- 308 (382)
T PRK14085 264 SGTVAT--LLPGAEFS-------------------TRQPYPDARRLLDAGVTVALASDCNPGSSYT-------------- 308 (382)
T ss_pred cCCEEE--ECcHHHHh-------------------cCCCCchHHHHHHCCCcEEEEeCCCCCCChH--------------
Confidence 786443 35542110 0011235678889999999999975432211
Q ss_pred CchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCce
Q 010547 391 ISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEF 452 (507)
Q Consensus 391 ~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~ 452 (507)
..+..... .....+++++++++++|.|||++||+++.|+|++||.|||+++|.+...
T Consensus 309 -----~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~G~l~~G~~ADlvv~d~~~~~ 366 (382)
T PRK14085 309 -----SSMPFCVALAVRQMGMTPAEAVWAATAGGARALRRDDVGVLAVGARADLHVLDAPSHL 366 (382)
T ss_pred -----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCCCcCCCCCCCEEEEcCCCCc
Confidence 00222122 2345689999999999999999999965899999999999999987543
No 82
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=99.96 E-value=2.3e-28 Score=249.27 Aligned_cols=362 Identities=15% Similarity=0.117 Sum_probs=200.0
Q ss_pred eEEEEecEEECCCCc-eeeeEEEeC-CEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC---------
Q 010547 44 QYWLTSKRIVTPKGV-ISGAVEIKE-GNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--------- 112 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~-~~~~I~I~d-G~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~--------- 112 (507)
+++++++.+ ++++ .+++|+|+| |||++||+....+ + ++..|++|+|||||+|+|+.....
T Consensus 4 ~~~~~~~~~--~~~~~~~~~v~i~~~grI~~vg~~~~~~----~---~~~~g~~vlPGlVn~H~H~~~~~~rg~~~~~~~ 74 (456)
T PRK09229 4 TLFAERALL--PDGWARNVRLTVDADGRIAAVEPGAAPA----G---AERLAGPVLPGMPNLHSHAFQRAMAGLTEVRGP 74 (456)
T ss_pred hHHHHHhhC--CCccccCcEEEEecCCeEEEecCCCCCc----c---ccccCcEEccCcccccccHhhHhhcCcccccCC
Confidence 444555555 4443 578999999 9999999854311 2 345899999999999999863200
Q ss_pred -----CCCCC-------------h----hHHHHHHHhCCceEEEeCCCCCCC------CCCCHHHHHHHHHHHhc---Cc
Q 010547 113 -----TEWEG-------------F----PSGTKAAAAGGITTLIDMPLNSDP------STISTETLKLKVDAAEK---RI 161 (507)
Q Consensus 113 -----~~~~~-------------~----~~~~~~~l~~GvTt~~~~~~~~~p------~~~~~~~~~~~~~~~~~---~~ 161 (507)
..|-. + ...+.+++++||||+.++. ...+ .....+......++... +.
T Consensus 75 ~~~~l~~w~~~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~-~~~~~~~~~~~~~~~~~~~a~~~a~~e~GiR~ 153 (456)
T PRK09229 75 PQDSFWSWRELMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFH-YLHHDPDGTPYADPAEMALRIVAAARAAGIGL 153 (456)
T ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeee-eeccCCCCCccCChHHHHHHHHHHHHHcCCEE
Confidence 01100 0 1234567899999999863 1111 11112333344444432 22
Q ss_pred eeeEEE--eccccCCCc--------c----cHHHHHHHHH--cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 010547 162 YVDVGF--WGGLVPENA--------Y----NASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR 225 (507)
Q Consensus 162 ~~~~~~--~~~~~~~~~--------~----~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 225 (507)
.+.... +.+....++ . ..+..+++.+ .+...+...+.+ .....++++.++++.+.| ++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~s~e~l~~~~~~A-~~g~ 229 (456)
T PRK09229 154 TLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAALPGARLGLAP---HSLRAVTPDQLAAVLALA-APDG 229 (456)
T ss_pred EeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcCCCceEEEEeC---CCCCCCCHHHHHHHHHHh-cCCC
Confidence 121111 111100000 1 1112222222 111112222222 333467999999999999 9999
Q ss_pred cEEEecCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHH
Q 010547 226 PLLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDL 304 (507)
Q Consensus 226 ~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~ 304 (507)
++.+|+.+.. .+.......+ ..-.+...+. + ..+.++.+.|+..- +.+.
T Consensus 230 ~i~~H~~e~~~e~~~~~~~~g------------------------~~~~~~l~~~--g--~l~~~~~l~H~~~l--~~~d 279 (456)
T PRK09229 230 PVHIHIAEQTKEVDDCLAWSG------------------------ARPVEWLLDH--A--PVDARWCLVHATHL--TDAE 279 (456)
T ss_pred ceEEEeCCCHHHHHHHHHHcC------------------------CCHHHHHHHc--C--CCCCCeEEEeeccC--CHHH
Confidence 9999994322 1111111000 0001111111 1 11556778888763 3445
Q ss_pred HHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC-ChhhhccccCC
Q 010547 305 LMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT-VPELKLLDEGN 383 (507)
Q Consensus 305 i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~-~~~~~~~~~~~ 383 (507)
++.+++.|+.+. +||... .. ......++.++++.|+++++|||.... ++...+
T Consensus 280 ~~~la~~g~~v~--~~P~sn------~~-------------lg~g~~p~~~l~~~Gv~v~lGtD~~~~~d~~~~~----- 333 (456)
T PRK09229 280 TARLARSGAVAG--LCPTTE------AN-------------LGDGIFPAVDYLAAGGRFGIGSDSHVSIDLVEEL----- 333 (456)
T ss_pred HHHHHHcCCeEE--ECchhh------hh-------------hcCCCCCHHHHHHCCCeEEEecCCCCCCCHHHHH-----
Confidence 777777786654 466321 00 001122456788899999999996431 111110
Q ss_pred ccccCCCCchhhhHHHHHHHHHH----------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceE
Q 010547 384 FLKAWGGISSLQFVLPVTWSYGR----------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFE 453 (507)
Q Consensus 384 ~~~~~~~~~~~~~~l~~~~~~~~----------~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~ 453 (507)
.+........ +..++++++++++|.|+|+++|+ ++|+|++||+||||++|.+.+..
T Consensus 334 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~-~~GsLe~Gk~ADlvvld~~~~~~ 399 (456)
T PRK09229 334 -------------RLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR-AIGGLAVGARADLVVLDLDHPAL 399 (456)
T ss_pred -------------HHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC-CcCCcCCCCccCEEEEeCCCccc
Confidence 0100011110 12467899999999999999999 68999999999999999876322
Q ss_pred eCCCCCcccCCCCCccccCcEE---eeEEEEEEECCEEEEecCcccC
Q 010547 454 LDNDHPVHMKHPSISAYLGRRL---SGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~---~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
.+. .. .+++..+.. ...|..|||+|++||++|++++
T Consensus 400 ~~~-------~~-~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~d 438 (456)
T PRK09229 400 AGR-------EG-DALLDRWVFAGGDAAVRDVWVAGRWVVRDGRHRL 438 (456)
T ss_pred cCC-------Ch-hhHHHHHhhcCCCCCeeEEEECCEEEEECCccCC
Confidence 110 00 122221121 2469999999999999998764
No 83
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.96 E-value=1.5e-27 Score=234.34 Aligned_cols=343 Identities=22% Similarity=0.244 Sum_probs=204.6
Q ss_pred ceEEEEecEEECCCCce-eeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---CCCCh
Q 010547 43 NQYWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGF 118 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~-~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~~~~~ 118 (507)
++++|+|++|++++++. +++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+... +.+.+
T Consensus 3 ~~~~i~n~~i~~~~~~~~~~~i~V~dGkI~~I~~~~~~~---~~~~viD~~G~~i~PGfID~HvHg~~g~~~~~~~~e~~ 79 (380)
T TIGR00221 3 ESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELE---PEIKEIDLPGNVLTPGFIDIHIHGCGGVDTNDASFETL 79 (380)
T ss_pred ceEEEEeeEEECCCCEEeccEEEEECCEEEEEcccccCC---CCCeEEECCCCEEccceeeeeeccccCcCCCCCCHHHH
Confidence 46899999999988765 689999999999998764332 246899999999999999999998654222 23567
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh-cCceeeEEE--eccccCCCcccHHHHHHHHHcCCcEEEE
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-KRIYVDVGF--WGGLVPENAYNASALEALLNAGVLGLKS 195 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (507)
....+.++++|||++++.. .+.|.....+.+....+... ......++. .+++.... ..|+...
T Consensus 80 ~~~~~~~~~~GvTt~l~t~-~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGPfi~~~-----------~~Gah~~-- 145 (380)
T TIGR00221 80 EIMSERLPKSGCTSFLPTL-ITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGPFLSPE-----------KKGAHPP-- 145 (380)
T ss_pred HHHHHHHHhcCeeEEeeec-cCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecCcCChh-----------hcCCCCH--
Confidence 8888999999999999887 44444333444444444331 222233333 22222111 1222211
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe-cCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHH
Q 010547 196 FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH-AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 274 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 274 (507)
.....++.++++++.+.+... +++.+- +|... -.++++
T Consensus 146 -------~~i~~p~~~~~~~~~~~~~~~-i~~vTlAPE~~~---------------------------------~~~~i~ 184 (380)
T TIGR00221 146 -------EYIREPDVELFKKFLCEAGGV-ITKVTLAPEEDQ---------------------------------HFELIR 184 (380)
T ss_pred -------HHhhCcCHHHHHHHHHhcCCC-EEEEEECCCCCC---------------------------------hHHHHH
Confidence 111235667777777654322 222222 22111 134455
Q ss_pred HHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCC------------CCcee-Ec
Q 010547 275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG------------DTRFK-CA 341 (507)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~------------~~~~~-~~ 341 (507)
.+.+. |..+.+.|... +.+++..+.+.|..... |++.....+... ..... +.
T Consensus 185 ~l~~~-------gi~vs~GHs~A---~~~~~~~a~~~Ga~~~T-----HlfNaM~~~~hR~pg~vga~l~~~~~~~elI~ 249 (380)
T TIGR00221 185 HLKDA-------GIIVSAGHTNA---TYELAKAAFKAGATHAT-----HLYNAMSPIHHREPGVIGAVLDHDDVYTEIIA 249 (380)
T ss_pred HHHHC-------CeEEEeeCCCC---CHHHHHHHHHcCCCeee-----eeccCCCCcCCCCCcHHHHHhcCCCcEEEEEc
Confidence 55543 77777777553 35566666677765322 222222222111 00111 11
Q ss_pred CCCCC-hhhHHHHHHHHhcC-CeeEEeCCCCCCCh--hhh--------ccccCCccccCCCCchhhhHHHHHHHHHHh-c
Q 010547 342 PPIRD-AANKEKLWEALMDG-HIDMLSSDHSPTVP--ELK--------LLDEGNFLKAWGGISSLQFVLPVTWSYGRK-Y 408 (507)
Q Consensus 342 p~~~~-~~~~~~~~~~l~~G-~~~~lgtD~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 408 (507)
..++- .....-+.+.. | -.+.+-||...... ... .+..|......+.++|....|...++.+.+ .
T Consensus 250 Dg~Hv~p~~~~~~~r~k--g~~~~~lvtDa~~~~g~~~G~y~l~~~~v~~~~g~~~~~~g~LAGs~ltl~~~v~~l~~~~ 327 (380)
T TIGR00221 250 DGIHIHPLNIRLAKKLK--GDSKLCLVTDSMAAAGAKDGVFIFGGKTVYIREGTCLDSNGTLAGSSLTMIEGARNLVEFT 327 (380)
T ss_pred CCCcCCHHHHHHHHHhc--CCCcEEEEeccccccCCCCceEeECCEEEEEECCEEEcCCCceechhhhHHHHHHHHHHhh
Confidence 11111 11111222222 4 35778899654221 110 111222233344577777667766666655 4
Q ss_pred CCCHHHHHHHHhhchhHHhCCC-CCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCE
Q 010547 409 GVTLEQLASWWSERPAKLAGQV-SKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGN 487 (507)
Q Consensus 409 gls~~~al~~~T~n~A~~lgl~-~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~ 487 (507)
+++++++++++|.|||+++|++ ++|+|++|+.|||+++|.+. .|..||++|+
T Consensus 328 ~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvv~d~~~---------------------------~v~~t~~~G~ 380 (380)
T TIGR00221 328 NISLTDAARMSSLNPARALGIDDRLGSVTVGKDANLVVFTPDF---------------------------EVILTIVNGN 380 (380)
T ss_pred CCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCcCCEEEECCCC---------------------------CEEEEEeCCC
Confidence 7999999999999999999994 47999999999999999652 6899999995
No 84
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.96 E-value=3.8e-28 Score=242.97 Aligned_cols=322 Identities=20% Similarity=0.191 Sum_probs=184.9
Q ss_pred eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC--------------C---------
Q 010547 59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--------------W--------- 115 (507)
Q Consensus 59 ~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~--------------~--------- 115 (507)
.+++|+|+||+|++||+....+. +.+.++||++|++|+|||||+|+|+....... |
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~-~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPG-EEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILS 80 (377)
T ss_pred CceEEEEECCEEEEEechhhCCc-ccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCChHH
Confidence 57899999999999998543331 12568999999999999999999997431110 0
Q ss_pred ----------CChh----HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe---c-cccCC--C
Q 010547 116 ----------EGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW---G-GLVPE--N 175 (507)
Q Consensus 116 ----------~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~--~ 175 (507)
+++. ..+..++++|||++.... ...-.......+.+..+.+..+..+.+... . .+... .
T Consensus 81 ~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~-~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 159 (377)
T TIGR01224 81 TVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKS-GYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQG 159 (377)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecc-cCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCccccC
Confidence 0001 123567899999984321 110000111122233333322222222211 0 11110 1
Q ss_pred c--ccH----H-HHHHHHHcC-CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCc
Q 010547 176 A--YNA----S-ALEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 247 (507)
Q Consensus 176 ~--~~~----~-~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 247 (507)
. ... + .+++..+.+ +.+++.+.. ....+.+.+.++++.|+++|.++.+|+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~----------- 222 (377)
T TIGR01224 160 RPDDYVDGICEELIPQVAEEGLASFADVFCE------AGVFSVEQSRRILQAAQEAGLPVKLHAEELSN----------- 222 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCeeEEEec------CCCcCHHHHHHHHHHHHHCCCCEEEEecCCCC-----------
Confidence 0 011 1 223333333 445443221 12456789999999999999999999953211
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccc
Q 010547 248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS 327 (507)
Q Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~ 327 (507)
+. .+..... . |. ..+.|+... +.+.++.+++.|+.+. +||......
T Consensus 223 -------------~~-----~~~~~~~----~-------g~-~~~~H~~~~--~~~~l~~la~~g~~~~--~~P~~~~~l 268 (377)
T TIGR01224 223 -------------LG-----GAELAAK----L-------GA-VSADHLEHA--SDAGIKALAEAGTVAV--LLPGTTFYL 268 (377)
T ss_pred -------------CC-----HHHHHHH----c-------CC-CccHHHhcC--CHHHHHHHHhcCCEEE--ECchHHHhc
Confidence 00 1111111 1 10 123355442 3346777778887554 466432111
Q ss_pred ccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCC-CChhhhccccCCccccCCCCchhhhHHHHHHH-HH
Q 010547 328 AEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YG 405 (507)
Q Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ 405 (507)
+ ....++.++++.|+++++|||+.+ ++.... +...+. ..
T Consensus 269 -------~------------~~~~p~~~l~~~Gv~v~lgTD~~~~~~~~~~--------------------~~~~~~~~~ 309 (377)
T TIGR01224 269 -------R------------ETYPPARQLIDYGVPVALATDLNPGSSPTLS--------------------MQLIMSLAC 309 (377)
T ss_pred -------C------------CcCccHHHHHHCCCCEEEECCCCCCCChhHH--------------------HHHHHHHHH
Confidence 0 011235677889999999999754 322111 211222 23
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEE
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATIS 484 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v 484 (507)
...+++++++++++|.|||+++|+ +.+|+|++||.||||++|.+++..+. ..... .+|..||+
T Consensus 310 ~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~----~~~~~------------~~v~~v~v 373 (377)
T TIGR01224 310 RLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAEIP----YHYGV------------NHVHAVIK 373 (377)
T ss_pred HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHHhh----hhcCC------------CCceEEEE
Confidence 456899999999999999999999 55899999999999999988643321 01111 26999999
Q ss_pred CCEE
Q 010547 485 RGNL 488 (507)
Q Consensus 485 ~G~~ 488 (507)
+|++
T Consensus 374 ~G~~ 377 (377)
T TIGR01224 374 NGNI 377 (377)
T ss_pred CCCC
Confidence 9984
No 85
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.96 E-value=9.9e-27 Score=238.25 Aligned_cols=329 Identities=19% Similarity=0.140 Sum_probs=208.7
Q ss_pred CCcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG 117 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~ 117 (507)
..+.+++|+|++|+++.. +..++|+|+||+|++|++..... .+.++||++|++|+|||||+|+|+..... +.
T Consensus 27 ~~~~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~~---~~~~vIDa~G~~v~PGlIDaHvHiess~~-~p-- 100 (588)
T PRK10027 27 DAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADA---PALQRIDARGATAVPGFIDAHLHIESSMM-TP-- 100 (588)
T ss_pred CCCCCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCCC---CCCeEEECCCCEEEECeEeccccCCcccC-CH--
Confidence 345678999999998632 56789999999999997653221 24689999999999999999999987543 22
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec----cccC----C-CcccHHHHHHHHH-
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG----GLVP----E-NAYNASALEALLN- 187 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~-~~~~~~~~~~~~~- 187 (507)
....+.++.+||||+++.| ++.+.....+.+....+.+.... .++++.. +... . ..-..++++++.+
T Consensus 101 -~~~a~aal~~G~TtVv~dP-hei~nv~g~~gi~~~l~~a~~~p-~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~ 177 (588)
T PRK10027 101 -VTFETATLPRGLTTVICDP-HEIVNVMGEAGFAWFARCAEQAR-QNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDH 177 (588)
T ss_pred -hHHHHHHHhCceEEEEcCC-CCcccCCCHHHHHHHHHHhhhCC-CeeEEeecccCcCCcccccCCCcCCHHHHHHHhcC
Confidence 2335568999999999998 77788788888877776655332 2222111 1111 1 1124567777765
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (507)
..+.++...|.+.+ .-..+++.+.++. .+ .++++..|+..... .
T Consensus 178 ~~v~glgEvMn~~~---V~~~d~~~~~ki~-~~--~~~~idGH~p~l~g------------------------------~ 221 (588)
T PRK10027 178 PQVTGLAEMMDYPG---VISGQNALLDKLD-AF--RHLTLDGHCPGLGG------------------------------K 221 (588)
T ss_pred CCceeEEeccCccc---cccCCHHHHHHHH-Hh--CCCceECCCCCCCh------------------------------H
Confidence 56778888776643 2234555566665 34 89999999853321 1
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
.+...+.. |. ...|-.. +.+...+-.+.|..+..-- ++ ..
T Consensus 222 ~L~ay~aa-----------Gi--~sDHE~~---t~eea~eklr~Gm~v~iRe---------------gS---------~~ 261 (588)
T PRK10027 222 ELNAYIAA-----------GI--ENCHESY---QLEEGRRKLQLGMSLMIRE---------------GS---------AA 261 (588)
T ss_pred HHHHHHHc-----------CC--CCCcccC---CHHHHHHHHHCCCEEEEeC---------------Cc---------cc
Confidence 12222111 21 2233322 2223333335555443210 00 01
Q ss_pred hhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh-cCCCHHHHHHHHhhchh
Q 010547 348 ANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPA 424 (507)
Q Consensus 348 ~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~gls~~~al~~~T~n~A 424 (507)
.+.+.+...+.+- -..+++||........+ .| .+....+.+.+ .|+++++|++++|.|||
T Consensus 262 ~nl~~l~~~~~~~~~~~~~l~TDd~~~~~l~~---~G--------------hi~~~vr~av~~~Gi~~~~Ai~mAT~nPA 324 (588)
T PRK10027 262 RNLNALAPLINEFNSPQCMLCTDDRNPWEIAH---EG--------------HIDALIRRLIEQHNVPLHVAYRVASWSTA 324 (588)
T ss_pred cCHHHHHHHhhccCCCeEEEEcCCCChHHHHh---cc--------------CHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1122233333221 35689999764322211 11 13444555555 79999999999999999
Q ss_pred HHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc
Q 010547 425 KLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA 496 (507)
Q Consensus 425 ~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~ 496 (507)
+++|+++.|+|++|+.|||+++|... .. .+..||++|++|+++ +..
T Consensus 325 ~~lgl~d~G~IapG~~ADlvvld~l~-------------~~------------~v~~v~~~G~~v~~~-~~~ 370 (588)
T PRK10027 325 RHFGLNHLGLLAPGKQADIVLLSDAR-------------KV------------TVQQVLVKGEPIDAQ-TLQ 370 (588)
T ss_pred HHcCCCCCcccCCCCcCCEEEEccCC-------------Cc------------eEEEEEECCEEeecc-ccc
Confidence 99999668999999999999999421 01 588999999999987 654
No 86
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.96 E-value=4.8e-28 Score=243.95 Aligned_cols=343 Identities=15% Similarity=0.119 Sum_probs=194.8
Q ss_pred ECCCCce-eeeE-EEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC--------CCC-----
Q 010547 53 VTPKGVI-SGAV-EIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--------WEG----- 117 (507)
Q Consensus 53 ~~~~~~~-~~~I-~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~--------~~~----- 117 (507)
++++++. +++| +|+||+|++||+... .++||++|++|+|||||+|+|+....... ...
T Consensus 2 ~~~~~~~~~~~i~~v~~g~I~~Vg~~~~-------~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~ 74 (418)
T cd01313 2 LLPEGWERNVRIEVDADGRIAAVNPDTA-------TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWR 74 (418)
T ss_pred cCCCceecCeEEEEeCCCeEEEecCCCC-------CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHH
Confidence 4566654 6899 999999999998532 35699999999999999999997531110 000
Q ss_pred ------------------hhHHHHHHHhCCceEEEeCCCCCCCCC------CCHHHHHHHHHHHhc---CceeeEEE--e
Q 010547 118 ------------------FPSGTKAAAAGGITTLIDMPLNSDPST------ISTETLKLKVDAAEK---RIYVDVGF--W 168 (507)
Q Consensus 118 ------------------~~~~~~~~l~~GvTt~~~~~~~~~p~~------~~~~~~~~~~~~~~~---~~~~~~~~--~ 168 (507)
....+.+++++||||+.++. ...+.. ..........+++.. +..+.... .
T Consensus 75 ~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~ 153 (418)
T cd01313 75 ELMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFH-YVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYAR 153 (418)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEee-eeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEec
Confidence 11234467899999999863 111110 011222333333332 22221111 1
Q ss_pred ccccCCCc------------ccHHHHHHHH----HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 010547 169 GGLVPENA------------YNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (507)
Q Consensus 169 ~~~~~~~~------------~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 232 (507)
.++....+ +..+.+.+++ +.+. +...+.+ .....++++.++++.+.|++ |.++.+|+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p---~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~ 227 (418)
T cd01313 154 AGFGGPAPNPGQRRFINGYEDFLGLLEKALRAVKEHAA--ARIGVAP---HSLRAVPAEQLAALAALASE-KAPVHIHLA 227 (418)
T ss_pred cCCCCCCCchhhhhhcccHHHHHHHHHHHhhhhccCCc--eEEEEcc---CCCCCCCHHHHHHHHHHHhc-CCceEEEeC
Confidence 11111110 0111122211 2222 2222222 22235789999999999999 999999984
Q ss_pred Ccc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhC
Q 010547 233 MEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTN 311 (507)
Q Consensus 233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~ 311 (507)
+.. .+.......+ ..-++...+. + ..+.++.+.|+..- +.+.++.+++.
T Consensus 228 e~~~e~~~~~~~~g------------------------~~~i~~l~~~--g--~l~~~~~~~H~~~l--~~~~~~~la~~ 277 (418)
T cd01313 228 EQPKEVDDCLAAHG------------------------RRPVELLLDH--G--HLDARWCLVHATHL--TDNETLLLGRS 277 (418)
T ss_pred CCHHHHHHHHHHcC------------------------CCHHHHHHHc--C--CCCCCEEEEeCCCC--CHHHHHHHHHc
Confidence 321 1110000000 0011111111 1 12667888888873 34567778888
Q ss_pred CCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC-ChhhhccccCCccccCCC
Q 010547 312 GDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT-VPELKLLDEGNFLKAWGG 390 (507)
Q Consensus 312 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~-~~~~~~~~~~~~~~~~~~ 390 (507)
|+.+.. ||...... + ....++.++++.|+++++|||.... ++...+
T Consensus 278 g~~v~~--~P~sn~~l-------g------------~g~~p~~~l~~~Gv~v~lGtD~~~~~d~~~~~------------ 324 (418)
T cd01313 278 GAVVGL--CPTTEANL-------G------------DGIFPAAALLAAGGRIGIGSDSNARIDLLEEL------------ 324 (418)
T ss_pred CCEEEE--CCCchhhc-------c------------CCCCCHHHHHHCCCcEEEecCCCCCcCHHHHH------------
Confidence 876544 66421110 0 1122456788899999999996432 111110
Q ss_pred CchhhhHHHH-HHHHHH--------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcc
Q 010547 391 ISSLQFVLPV-TWSYGR--------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVH 461 (507)
Q Consensus 391 ~~~~~~~l~~-~~~~~~--------~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~ 461 (507)
.... +.+... ...++++++++++|.|+|++||++ .|+|++||.||||++|.+.++..+..
T Consensus 325 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~-~Gsle~Gk~ADlvvld~~~~~~~p~~---- 393 (418)
T cd01313 325 ------RQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA-TGALEAGARADLLSLDLDHPSLAGAL---- 393 (418)
T ss_pred ------HHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC-CCeECCCCccCEEEEcCCCccccCCC----
Confidence 0111 111111 236899999999999999999997 89999999999999998876544321
Q ss_pred cCCCCCccccCcEEe---eEEEEEEECCE
Q 010547 462 MKHPSISAYLGRRLS---GKVLATISRGN 487 (507)
Q Consensus 462 ~~~~~~~~~~~~~~~---~~V~~v~v~G~ 487 (507)
. ++|+..+... +.|+.|||+|+
T Consensus 394 ---~-~~~~~~lv~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 394 ---P-DTLLDAWVFAAGDREVRDVVVGGR 418 (418)
T ss_pred ---c-hhHHHHHeecCCCCceeEEEeCCC
Confidence 0 2334434432 46999999996
No 87
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.96 E-value=7.3e-27 Score=230.15 Aligned_cols=344 Identities=18% Similarity=0.176 Sum_probs=197.8
Q ss_pred EEEEecEEECCCCce-eeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC-------CCCC
Q 010547 45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR-------TEWE 116 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~-~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~-------~~~~ 116 (507)
++|+|++|++++++. +++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+..+.. ...+
T Consensus 2 ~~i~n~~i~~~~~~~~~~~v~IedgkI~~I~~~~~~~---~~~~~ID~~G~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~ 78 (382)
T PRK11170 2 YALTNGRIYTGHEVLDDHAVVIADGLIEAVCPVAELP---PGIEQRDLNGAILSPGFIDLQLNGCGGVQFNDTAEAISVE 78 (382)
T ss_pred EEEEeeEEECCCCeEeCCEEEEECCEEEEecCCccCC---CCCeEEeCCCCEEccceeeeeecCccCcccccCccCCCHH
Confidence 679999999998865 569999999999998764332 25589999999999999999999865432 1234
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe--ccccCCCcccHHHHHHHHHcCCcEEE
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW--GGLVPENAYNASALEALLNAGVLGLK 194 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~ 194 (507)
.++...+.++++|||++++.. .+.+.....+.+....+.........++.| +++.... +.|+....
T Consensus 79 ~l~~~~~~~~~~GvTt~lpT~-it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGPfi~~~-----------~~Gah~~~ 146 (382)
T PRK11170 79 TLEIMQKANEKSGCTSFLPTL-ITSSDELMKQAVRVMREYLAKHPNQALGLHLEGPYLNLV-----------KKGTHNPE 146 (382)
T ss_pred HHHHHHHHHHhcCEeEEeeec-cCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecCCCCcc-----------cCCCCCHH
Confidence 566667778999999999876 333333323334443333332233333333 3332221 12221111
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHH
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 274 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 274 (507)
....++.++++.+.+.+ . .+++.+-+ |+.. . .++++
T Consensus 147 ---------~~~~p~~~~~~~~~~~~-~-~i~~iTlA-----------------------------PE~~---~-~~~i~ 182 (382)
T PRK11170 147 ---------FIRKPDAEMVDFLCENA-D-VITKVTLA-----------------------------PEMV---D-AEVIR 182 (382)
T ss_pred ---------HhcCcCHHHHHHHHhcc-C-CEEEEEEC-----------------------------CCCC---c-HHHHH
Confidence 11124455555555432 1 22222222 1100 1 24444
Q ss_pred HHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCC------------Ccee-Ec
Q 010547 275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD------------TRFK-CA 341 (507)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~------------~~~~-~~ 341 (507)
.+.+. |..+.+.|... +.+.+..+.+.|..... |++.....+.... .... ++
T Consensus 183 ~l~~~-------gi~vs~GHs~A---~~~~~~~a~~~Ga~~~T-----HlfNaM~~~~hR~pg~vga~l~~~~~~~elI~ 247 (382)
T PRK11170 183 KLVEA-------GIVVSAGHSNA---TYEEAKAGFRAGITFAT-----HLYNAMPYITGREPGLVGAILDEPDVYCGIIA 247 (382)
T ss_pred HHHHC-------CcEEEeeCCcC---CHHHHHHHHHcCCCEEe-----eccccCCcccCCCcchhhHhhcCCCcEEEEEc
Confidence 44443 66666666532 35555666666665322 2222222221110 0111 11
Q ss_pred CCCC-ChhhHHHHHHHHhcCCeeEEeCCCCCCChhh--h--------ccccCCccccCCCCchhhhHHHHHHHHHH-hcC
Q 010547 342 PPIR-DAANKEKLWEALMDGHIDMLSSDHSPTVPEL--K--------LLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYG 409 (507)
Q Consensus 342 p~~~-~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~g 409 (507)
..++ .+....-+++.. |-.+.+-||..+..... + .+..|......+.++|....|...++.+. ..+
T Consensus 248 Dg~Hv~p~~~~~~~~~k--~~~~~lvtDa~~~~G~~~g~y~l~~~~v~v~~g~~~~~~G~LAGs~l~l~~~v~~l~~~~~ 325 (382)
T PRK11170 248 DGLHVDYANIRNAKRLK--GDKLCLVTDATAPAGANIEQFIFAGKTIYYRDGLCVDENGTLSGSALTMIEAVRNLVEHVG 325 (382)
T ss_pred CcccCCHHHHHHHHHhc--CCcEEEEeccccCCCCCCCeEEECCEEEEEECCEEECCCCcccccHhHHHHHHHHHHHhcC
Confidence 1111 111122223333 45677889965422110 0 01122222233456666666666666554 479
Q ss_pred CCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEE
Q 010547 410 VTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNL 488 (507)
Q Consensus 410 ls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~ 488 (507)
++++++++++|.|||+++|+ +++|+|++|+.|||+++|.+. .|..||++|+.
T Consensus 326 ~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvvld~~~---------------------------~v~~v~~~G~~ 378 (382)
T PRK11170 326 IALDEALRMATLYPARAIGVDKRLGSIEAGKVANLTAFTRDF---------------------------KITKTIVNGNE 378 (382)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEECCCC---------------------------cEEEEEECCEE
Confidence 99999999999999999999 457999999999999999541 68999999999
Q ss_pred EEe
Q 010547 489 VYK 491 (507)
Q Consensus 489 v~~ 491 (507)
++.
T Consensus 379 ~~~ 381 (382)
T PRK11170 379 VVT 381 (382)
T ss_pred eec
Confidence 975
No 88
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.96 E-value=4.7e-27 Score=234.73 Aligned_cols=392 Identities=20% Similarity=0.251 Sum_probs=217.4
Q ss_pred EEEEecEEECCCC-c--eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC-----C
Q 010547 45 YWLTSKRIVTPKG-V--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW-----E 116 (507)
Q Consensus 45 ~~i~n~~i~~~~~-~--~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~-----~ 116 (507)
++|+|++|+++.. . ..++|+|+||+|++|++..+ . +.++||++|++|+|||||+|+|+..+..... +
T Consensus 2 ~iIkng~I~dp~~~~~~~~~dI~IedGkIveIg~~~~-~----~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~~pE 76 (556)
T TIGR03121 2 ILIKNGTVYDPANGIDGEVMDIFIRDGKIVEPVSGGT-K----PAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLLRPE 76 (556)
T ss_pred EEEEeEEEEcCCCCccccccEEEEECCEEEEecCCCC-C----CCeEEECCCCEEEeCEEeeeECCCccccccccccCHH
Confidence 5799999999865 3 24799999999999986533 1 4589999999999999999999986411100 0
Q ss_pred ----------------------ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc--
Q 010547 117 ----------------------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-- 172 (507)
Q Consensus 117 ----------------------~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 172 (507)
+......++++.|+||++++. .|.... .....++.....++...+.-+.
T Consensus 77 ~~~~~~~~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa---~~p~~a----rh~h~e~~~~p~~d~~~~~~~gnn 149 (556)
T TIGR03121 77 DHRRDPEPRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAA---VPPLNA----RHTHEEFADTPILDKGGYTLLGNN 149 (556)
T ss_pred HHhhcchhhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCC---CCccch----hhhHHHhccCccccccceEEecch
Confidence 112233577899999999875 133222 2223333333333332221111
Q ss_pred -------CCC-cccH-HHHHHHHH-cCCcEEEEcccCCC----------------CCCCCCCCHHHHHHHHHHHHhcCCc
Q 010547 173 -------PEN-AYNA-SALEALLN-AGVLGLKSFMCPSG----------------INDFPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 173 -------~~~-~~~~-~~~~~~~~-~g~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
... .+.. +-+..+++ ....++|..- +.| .+.....+.+.++.+.+...++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~vaw~l~~tk~~giK~vn-pgG~~a~~~~~~~~~~d~~~~~~~vtp~~i~~~l~~~~e~l~lp 228 (556)
T TIGR03121 150 WFLLEYLKDGEPEKAAAYVAWLLKATKGYGIKVVN-PGGVEAWGWGENVLSLDDPVPYFGITPREIIKGLARANEELGLP 228 (556)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhccceEEEEEC-CCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 111 1111 22222222 4566777631 111 0112224456677777888888887
Q ss_pred EEEe--cCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce------EEEEecC--
Q 010547 227 LLVH--AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH------LHIVHLS-- 296 (507)
Q Consensus 227 v~~H--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~------~~~~h~~-- 296 (507)
-.+| |.+.. .|...+ ..-+.+++.+ |.+ +|+.|+.
T Consensus 229 h~~h~H~nnlg------------------------~pgn~~--~t~~t~~~~~---------g~~~~~~~~~h~tH~qf~ 273 (556)
T TIGR03121 229 HSIHVHCNNLG------------------------VPGNYE--TTLDTLDAAE---------GVKPNRNQVLHLTHVQFH 273 (556)
T ss_pred ceEEEecCCCC------------------------CCCchH--HHHHHHHHhc---------CCCCCccceeEeeeeeee
Confidence 5555 43322 233222 2234555555 554 8888884
Q ss_pred -----C---hhHHHHHHHHHHhCCCCEEEeccc----ccccccccC-------------CCC----CCCceeEcCCC-CC
Q 010547 297 -----D---ASSSLDLLMEAKTNGDSITVETCP----HYLAFSAEE-------------IPD----GDTRFKCAPPI-RD 346 (507)
Q Consensus 297 -----~---~~~~~~~i~~~~~~g~~i~~~~~~----~~~~~~~~~-------------~~~----~~~~~~~~p~~-~~ 346 (507)
. -...-+.+.+.....-++++++.- +....+.+. ..+ ..+..-+.|-. +.
T Consensus 274 syg~~~~~~f~s~a~~~a~~vn~~~~~t~d~Gqv~fg~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~gvvp~~y~~ 353 (556)
T TIGR03121 274 SYGGTSWRDFESGAEKIADYVNANPNVTIDVGQVTFGETTTMTADGPMEYDLHKLTGLKWANKDVELETGSGVVPFKYSP 353 (556)
T ss_pred ccCCCCCCCcchhHHHHHHHHhcCCCEEEEeCceecCCceEEeccchhhhhcccCCCCceeeeeeecccCCceEEeeecC
Confidence 1 012233455555555555544321 000011110 000 00010111111 22
Q ss_pred hhhHHHHH-----H--HHh-cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHH---HHH---HHHH-------
Q 010547 347 AANKEKLW-----E--ALM-DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVL---PVT---WSYG------- 405 (507)
Q Consensus 347 ~~~~~~~~-----~--~l~-~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~---~~~~------- 405 (507)
.....++. + ++. +--++.+.||+.- .|+|.+.+.-+.-+-..- ..+ ...+
T Consensus 354 ~~~v~~~qwaiglel~Ll~~dp~~~~~ttDhPn---------ggpf~~YP~ii~~lm~~~~r~~~~~~~~~~~~~~~~l~ 424 (556)
T TIGR03121 354 KNPVHALQWAIGLELFLLIKDPWRVFLTTDHPN---------GGPFTRYPRIIALLMSRKYREDMLSTVHPWAAARSTLG 424 (556)
T ss_pred CCcchHHHHHHhhHHHHhcCCcceeEEeccCCC---------CCcccchHHHHHHHcCHHHHHHHHHhcCHHHHhhcccc
Confidence 22222221 1 122 2346899999873 356666554333211100 000 1111
Q ss_pred -HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEE
Q 010547 406 -RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATIS 484 (507)
Q Consensus 406 -~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v 484 (507)
.+..+|++|+++++|.|||++||++++|+|++|+.|||+|+|.++...- .. ...+. ...+.+..||+
T Consensus 425 ~~~Re~sL~EI~~mtTanPAkaLGL~dkG~L~pGa~ADIaI~D~~~~~~~-~~---------~~~v~--~~~~~v~~Tik 492 (556)
T TIGR03121 425 GIDREYSLYEIAIMTRAGPAKLLGLTDRGHLGVGADADIAVYDINPDDVD-TD---------YADVE--KAFSTALYVFK 492 (556)
T ss_pred cccCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEeCcccccC-Cc---------hHHHh--hccCCccEEEE
Confidence 2345999999999999999999996679999999999999997653321 00 11111 11246899999
Q ss_pred CCEEEEecCcccCCCCCcccc
Q 010547 485 RGNLVYKEGNHAPAACGSPIL 505 (507)
Q Consensus 485 ~G~~v~~~g~~~~~~~~~~~~ 505 (507)
+|++|+++|+++....|+.+.
T Consensus 493 ~G~vV~~dGei~~~~~G~~~~ 513 (556)
T TIGR03121 493 DGEIVVKDGEIVETPWGRTYW 513 (556)
T ss_pred CCEEEEECCEEccCCCCcEEE
Confidence 999999999999988998875
No 89
>PRK05451 dihydroorotase; Provisional
Probab=99.96 E-value=1.4e-26 Score=226.15 Aligned_cols=327 Identities=18% Similarity=0.214 Sum_probs=237.0
Q ss_pred EEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC--ceeeEEEecccc
Q 010547 95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLV 172 (507)
Q Consensus 95 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 172 (507)
+-+|=-||+|+|+-++ .. .+++. ...+.++|++++++ ++.|.....+.+......+... ..+++..++++.
T Consensus 5 ~~~~~~~d~h~hl~~~-~~-~~~~~----~~~~~~~t~~v~mP-nt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i~ 77 (345)
T PRK05451 5 LTIRRPDDWHLHLRDG-AM-LKAVV----PYTARQFGRAIVMP-NLVPPVTTVAQALAYRERILAALPAGSNFEPLMTLY 77 (345)
T ss_pred EEecCcceEEEecCCc-hH-HHHHH----HHHHHhcCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEEE
Confidence 4568889999999864 21 11222 23346799999999 7778877788887777766654 335677666665
Q ss_pred CCCcccHHHHHHHHHcCC-cEEEEcccCCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc
Q 010547 173 PENAYNASALEALLNAGV-LGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 250 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 250 (507)
.......++++++.+.|+ .++|.|+...+.. +....+++.+.++++.++++|.++.+|+++..... ..
T Consensus 78 ~~~~~~~~El~~~~~~Gvv~g~Kl~~~~~~~~~~~~~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~----------~~ 147 (345)
T PRK05451 78 LTDNTDPDELERAKASGVVTAAKLYPAGATTNSDAGVTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDI----------DI 147 (345)
T ss_pred eCCCCCHHHHHHHHHCCCEEEEEEecccCccCCccCcCCHHHHHHHHHHHHHcCCEEEEecCCCCccc----------cc
Confidence 554445688888888895 4999987532111 11123778999999999999999999998743200 00
Q ss_pred cccccccCCCChhHHHHHHHHH-HHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccccc
Q 010547 251 RSYSTYLKTRPPSWEEAAIREL-LTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE 329 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~-~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~ 329 (507)
...+...+.+. ..++.+ .++.++|+.|+++. .+++.++++ +.++++++||||+.++.+
T Consensus 148 -----------~~~e~~~~~~~l~~lA~~------~pg~~lhI~Hlst~-~~~e~i~~a---~~~it~Et~ph~L~l~~~ 206 (345)
T PRK05451 148 -----------FDREAVFIDRVLEPLRRR------FPKLKIVFEHITTK-DAVDYVREA---NDNLAATITPHHLLINRN 206 (345)
T ss_pred -----------ccchHHHHHHHHHHHHHh------cCCCcEEEEecCcH-HHHHHHHhc---CCCEEEEecHHHHhcCHH
Confidence 00123334443 335544 34888999999998 888888765 568999999999999998
Q ss_pred CCC--CCCCceeEcCCCCChhhHHHHHHHHhcCCee-EEeCCCCCCChhhhccccCCccccCCCCchhhh---HHHHHHH
Q 010547 330 EIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF---VLPVTWS 403 (507)
Q Consensus 330 ~~~--~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~-~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~ 403 (507)
.+. ..++.++++||+|...+++.+++++.+|.++ +++|||+|+...+|.. +.|..+++. .++.++.
T Consensus 207 ~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~--------~~G~~gi~~~~~g~~~~~~ 278 (345)
T PRK05451 207 DMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKES--------ACGCAGIFSAPAALELYAE 278 (345)
T ss_pred HHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCC--------CCCCCchhhHHHHHHHHHH
Confidence 865 4567799999999999999999999999999 7999999998776631 223334443 3454454
Q ss_pred HHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccc-cCcEEeeEEE
Q 010547 404 YGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAY-LGRRLSGKVL 480 (507)
Q Consensus 404 ~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~ 480 (507)
...+.+ ++++++++.+.|||++||+ +++|+|.+| +..|.++.. ...++.. ++|| .+-.+.++|.
T Consensus 279 ~~~~~~-~l~~~v~~~s~nPAkifGl~~~KG~i~~~----------~~~~~v~~~-~~~s~~~-~sp~~~~~~~~~~~~ 344 (345)
T PRK05451 279 VFEEAG-ALDKLEAFASLNGPDFYGLPRNTDTITLV----------REPWTVPES-IPFGDET-VVPFRAGETLRWSVK 344 (345)
T ss_pred HHHcCC-CHHHHHHHHhHHHHHHhCCCCCCCeEEEE----------ecceecCcc-cccCCCc-eeeecCCceeeeEec
Confidence 444444 9999999999999999999 889999888 466777766 6677777 8888 4666666654
No 90
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.96 E-value=3.2e-27 Score=235.86 Aligned_cols=318 Identities=18% Similarity=0.163 Sum_probs=185.0
Q ss_pred EEEeCCEEEEeecCCCCCC-CCCCCcEEecCCCEEecceeecccccCCCCCC-----------C----------------
Q 010547 63 VEIKEGNIISIVSEEDWPR-NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-----------E---------------- 114 (507)
Q Consensus 63 I~I~dG~I~~Vg~~~~~~~-~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~-----------~---------------- 114 (507)
|+|+||||++|++....+. .+.+.++||++|++|+|||||+|+|+...... .
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80 (371)
T ss_pred CEEECCEEEEEeCchhcccccCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHHH
Confidence 5799999999998654321 11256899999999999999999999653211 0
Q ss_pred ------CCC----hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEecc-ccCCCc----c
Q 010547 115 ------WEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGG-LVPENA----Y 177 (507)
Q Consensus 115 ------~~~----~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~----~ 177 (507)
.++ ....+..++++|||++.++. ...-.........+..+.+.. +..+......+ ..+... .
T Consensus 81 ~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~ 159 (371)
T cd01296 81 ATRAASEDELFASALRRLARMLRHGTTTVEVKS-GYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREE 159 (371)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHCCceEEEecc-cCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCcccCChHH
Confidence 001 11234567899999998742 100000111112222222222 22222222211 111101 1
Q ss_pred c-----HHHHHHHH-HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcc
Q 010547 178 N-----ASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (507)
Q Consensus 178 ~-----~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 251 (507)
. .+.++... ..+..+++.+... ...+.+.++++++.|+++|.++.+|+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~--------------- 218 (371)
T cd01296 160 YIDLVIEEVLPAVAEENLADFCDVFCEK------GAFSLEQSRRILEAAKEAGLPVKIHADELSN--------------- 218 (371)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeecC------CccCHHHHHHHHHHHHHCCCeEEEEEcCcCC---------------
Confidence 1 11222222 2456666654211 2356889999999999999999999954321
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCC
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI 331 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~ 331 (507)
+. .+..... . +. ..+.|+... ..+.++.+++.|+.+.. ||......
T Consensus 219 ---------~~-----~~~~~~~----~-------g~-~~i~H~~~~--~~~~i~~la~~g~~v~~--~P~~~~~l---- 264 (371)
T cd01296 219 ---------IG-----GAELAAE----L-------GA-LSADHLEHT--SDEGIAALAEAGTVAVL--LPGTAFSL---- 264 (371)
T ss_pred ---------CC-----HHHHHHH----c-------CC-CeeHHhcCC--CHHHHHHHHHcCCeEEE--ChHHHHHh----
Confidence 00 1111111 1 11 234565542 24577777788876544 55321110
Q ss_pred CCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCC
Q 010547 332 PDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGV 410 (507)
Q Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gl 410 (507)
+.. ..++.+++++|+++++|||+.+..... ..+...+.. ....++
T Consensus 265 ---~~~------------~~~~~~l~~~Gv~v~lgsD~~p~~~~~-------------------~~l~~~~~~~~~~~~l 310 (371)
T cd01296 265 ---RET------------YPPARKLIDAGVPVALGTDFNPGSSPT-------------------SSMPLVMHLACRLMRM 310 (371)
T ss_pred ---CCC------------CCCHHHHHHCCCcEEEecCCCCCCChH-------------------HHHHHHHHHHHHhcCC
Confidence 000 123467788999999999975432110 002222222 345689
Q ss_pred CHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECC
Q 010547 411 TLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRG 486 (507)
Q Consensus 411 s~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G 486 (507)
+++++++++|.|||+++|+ +++|+|++||.||||++|.++...+.. .... ..|..||++|
T Consensus 311 ~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~----~~~~------------~~v~~v~~~G 371 (371)
T cd01296 311 TPEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSYEHLAY----RFGV------------NLVEYVIKNG 371 (371)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCchHhhhh----hcCC------------CCceEEEeCc
Confidence 9999999999999999999 578999999999999999886543311 1111 2589999998
No 91
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.96 E-value=3.5e-27 Score=233.90 Aligned_cols=346 Identities=18% Similarity=0.172 Sum_probs=186.9
Q ss_pred CEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC---------C-------------CC----hhHH
Q 010547 68 GNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---------W-------------EG----FPSG 121 (507)
Q Consensus 68 G~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~---------~-------------~~----~~~~ 121 (507)
|+|++||+..+.+..+++.+++|+.|++|+|||||+|+|+....... | +. ....
T Consensus 1 ~~I~aVG~~~~~~~~~~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~~~~~~~~~e~~~~~a~~~ 80 (381)
T cd01312 1 DKILEVGDYEKLEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVINSRDELLKQPWEEAIRQG 80 (381)
T ss_pred CeEEEECChHHHHhhcCCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 79999998654433333678999999999999999999996542211 1 00 1223
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC-cccH-HHHHHHHH---cCCcEEEEc
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNA-SALEALLN---AGVLGLKSF 196 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~---~g~~~~~~~ 196 (507)
+.+++++||||+.++. . . .+ ..+.......+..+...... ..... .... +.++...+ .....+...
T Consensus 81 ~~E~l~~G~Tt~~d~~-~-~-----~~-~~~a~~~~GiR~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 151 (381)
T cd01312 81 IRQMLESGTTSIGAIS-S-D-----GS-LLPALASSGLRGVFFNEVIG-SNPSAIDFKGETFLERFKRSKSFESQLFIPA 151 (381)
T ss_pred HHHHHHhCCeEEEEec-C-C-----HH-HHHHHHHcCCcEEEEEeeEC-CCCchhhhhHHHHHHHHHHhhccCccceEEE
Confidence 4567899999999874 1 1 12 22222211112222222111 11110 0111 11111111 111113333
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCcCC-ccccccccCCCChhHHHHHHHHHHH
Q 010547 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTLD-TRSYSTYLKTRPPSWEEAAIRELLT 274 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~ 274 (507)
+.+ +....++++.++++.+.|++++.++++|+.+... ........+.-.. ...+.......+... .++.+
T Consensus 152 ~~p---~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~---pv~~l-- 223 (381)
T cd01312 152 ISP---HAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLAT---AIDFL-- 223 (381)
T ss_pred ECC---CCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccCCCC---HHHHH--
Confidence 332 3334678999999999999999999999854332 1111100000000 000000000000000 11222
Q ss_pred HHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHH
Q 010547 275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLW 354 (507)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 354 (507)
.+. +. -+.++.+.|+... ..+.++.+++.|+.+.. ||.. ... ......++.
T Consensus 224 --~~~--g~--L~~~~~~~H~~~l--~~~~~~~l~~~g~~v~~--~P~s------n~~-------------lg~g~~p~~ 274 (381)
T cd01312 224 --DML--GG--LGTRVSFVHCVYA--NLEEAEILASRGASIAL--CPRS------NRL-------------LNGGKLDVS 274 (381)
T ss_pred --HHc--CC--CCCCcEEEECCcC--CHHHHHHHHHcCCeEEE--Ccch------hhh-------------hcCCCcCHH
Confidence 211 11 1567888898874 34567777888876544 6631 000 001123456
Q ss_pred HHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh--cCCCHHHHHHHHhhchhHHhCCCCC
Q 010547 355 EALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK--YGVTLEQLASWWSERPAKLAGQVSK 432 (507)
Q Consensus 355 ~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~gls~~~al~~~T~n~A~~lgl~~~ 432 (507)
++++.|+.+++|||+.+++...++ ++. +......... ..++++++++++|.|||++||++ .
T Consensus 275 ~~~~~Gv~v~lGtD~~~~~~~~d~---------------~~~-~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~-~ 337 (381)
T cd01312 275 ELKKAGIPVSLGTDGLSSNISLSL---------------LDE-LRALLDLHPEEDLLELASELLLMATLGGARALGLN-N 337 (381)
T ss_pred HHHHCCCcEEEeCCCCccCCCCCH---------------HHH-HHHHHHhcccccccCCHHHHHHHHHHHHHHHhCCC-C
Confidence 888999999999997654322111 111 1111111111 13688999999999999999996 8
Q ss_pred CccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCE
Q 010547 433 GAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGN 487 (507)
Q Consensus 433 G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~ 487 (507)
|+|++||+||||++|.+.+. .+. ..++......+.|..|||+||
T Consensus 338 Gsle~Gk~ADlvv~d~~~~~-~~~----------~~~~~~~~~~~~v~~v~v~G~ 381 (381)
T cd01312 338 GEIEAGKRADFAVFELPGPG-IKE----------QAPLQFILHAKEVRHLFISGK 381 (381)
T ss_pred CccCCCCcccEEEEeCCCcC-CCC----------ccHHHHHHccCCCCEEEecCC
Confidence 99999999999999987641 111 222222223467999999996
No 92
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.96 E-value=7.1e-26 Score=225.18 Aligned_cols=397 Identities=19% Similarity=0.250 Sum_probs=223.6
Q ss_pred EEecEEECCCC-c--eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC-----C--
Q 010547 47 LTSKRIVTPKG-V--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW-----E-- 116 (507)
Q Consensus 47 i~n~~i~~~~~-~--~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~-----~-- 116 (507)
|+|++|+++.+ . .+++|+|+||+|++|++.. + +.++||++|++|+|||||+|+|+..+..... |
T Consensus 1 Ikng~V~d~~~~~~~~~~dI~IedGkIv~Vg~~~--~----~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~pe~~ 74 (541)
T cd01304 1 IKNGTVYDPLNGINGEKMDIFIRDGKIVESSSGA--K----PAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRPEDH 74 (541)
T ss_pred CEEEEEEcCCCcccccccEEEEECCEEEEEccCC--C----CCeEEECCCCEEECCeeeeeeCccccccccccccChhhh
Confidence 57999999865 3 4789999999999998643 1 4689999999999999999999975421100 0
Q ss_pred --------------------ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc----
Q 010547 117 --------------------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV---- 172 (507)
Q Consensus 117 --------------------~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 172 (507)
+.......+.+.|+||+++.. .|.... .....++.....++...+.-+.
T Consensus 75 ~~~~~~~~~~~~~~~g~~~pst~~tgy~ya~mGytt~~e~a---~~p~~a----~h~h~e~~~~p~~d~~~~~~~gnn~~ 147 (541)
T cd01304 75 RRDPVPKGALRRAGVGFSVPSTLATGYRYAEMGYTTAFEAA---MPPLNA----RHTHEEMADTPILDKGAYPLLGNNWF 147 (541)
T ss_pred hccccccccccccCCCccCCCchHhhhHHHhcCcceeeccc---CCcccc----hhhhHHhccCccccccceEEecchHH
Confidence 111223577899999999875 133222 2222333333333332211111
Q ss_pred -----CCCc-ccH-HHHHHHH-HcCCcEEEEcccCCC----------------CCCCCCCCHHHHHHHHHHHHhcCCcEE
Q 010547 173 -----PENA-YNA-SALEALL-NAGVLGLKSFMCPSG----------------INDFPMTNASHIKEGLSVLARYKRPLL 228 (507)
Q Consensus 173 -----~~~~-~~~-~~~~~~~-~~g~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~a~~~~~~v~ 228 (507)
...+ +.. +-+..++ .....++|..- +.| .+.....+.+.+..+.+.+.+++++..
T Consensus 148 ~~~~~~~~~~~~~~~~vaw~l~~tk~~giK~vn-pgG~~a~~~~~~~~~~d~~~~~~~vtp~~ii~~l~~~~~~lg~ph~ 226 (541)
T cd01304 148 VLEYLRDGDMEKLAAYVAWTLKASKGYGIKVVN-PGGTEAWGWGQNVLSLDDPVPYFDITPREILKGLAEANEELGLPHS 226 (541)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhccceEEEEEC-CCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCceE
Confidence 1111 111 2222222 24566777631 111 011223455667778888899998888
Q ss_pred EecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecC----------Ch
Q 010547 229 VHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----------DA 298 (507)
Q Consensus 229 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~----------~~ 298 (507)
+|.+.... +.|. ..+...+.+++++....... -..+|+.|+. .-
T Consensus 227 iH~h~nnl----------------------g~pg--n~~~t~~t~~~~~~~~~~~~--~~~~h~tH~qfhsyg~~~~~~~ 280 (541)
T cd01304 227 IHVHCNNL----------------------GVPG--NYETTLETMKAAEGVKPDPR--RQVLHLTHVQFHSYGGTSWRDF 280 (541)
T ss_pred EEEccccC----------------------CCCC--cHHHHHHHHHHhhcCCCccc--cceeEeeeeeEEeeccCCcccH
Confidence 88642211 1222 33344666677664311000 1248888884 11
Q ss_pred hHHHHHHHHHHhCCCCEEEeccccccc----cccc------------------CC-CCCCCceeEcCCC-CChhhHHHH-
Q 010547 299 SSSLDLLMEAKTNGDSITVETCPHYLA----FSAE------------------EI-PDGDTRFKCAPPI-RDAANKEKL- 353 (507)
Q Consensus 299 ~~~~~~i~~~~~~g~~i~~~~~~~~~~----~~~~------------------~~-~~~~~~~~~~p~~-~~~~~~~~~- 353 (507)
....+.+.++...+.++++++..--+. .+.+ ++ ...+.. +.|-. +.......+
T Consensus 281 ~s~a~~i~~~~n~~~~it~D~G~v~f~~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~G--vvp~~y~~k~~v~~lq 358 (541)
T cd01304 281 ESGAERIADYVNANDHVTIDVGQVIFGETTTMTGDGPMQFDLHGLTGLKWVNCDIELETGSG--VVPFIYSPKNPVNALQ 358 (541)
T ss_pred hHHHHHHHHHHHcCCCEEEEeCceecCCcEEEEccchhhcccccccCCceeeeeeEeccCCc--eEEeEecCCCCchHHH
Confidence 245566777777777776654422000 1100 00 011111 11221 122111222
Q ss_pred ------HHHHhcC-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhh---HHHHH---HHHH--------HhcCCCH
Q 010547 354 ------WEALMDG-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF---VLPVT---WSYG--------RKYGVTL 412 (507)
Q Consensus 354 ------~~~l~~G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~---~~~~--------~~~gls~ 412 (507)
.-++.+. -.+.++|||+- .|+|.+.+.-+.-+-. +...+ ...+ .+..+|+
T Consensus 359 waiglEl~ll~~dp~~~~~tTDhPn---------~gpf~~YP~~i~~lm~~~~r~~~~~~~~~~~~~~~~l~~~~reLSL 429 (541)
T cd01304 359 WAIGLELFLLIDDPWKVILTTDHPN---------GGPFTRYPRIIAWLMSKKFRAEEIATLHKWAQDRSALPGIDREYSL 429 (541)
T ss_pred HHHHHHHHHHhCCcceEEeecCCCC---------CCCcccHHHHHHHHhCHHHHHHHHHhcCHHHHhhccccCCCCCCCH
Confidence 1122233 37899999762 2445444322221110 00000 0111 1234799
Q ss_pred HHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 413 EQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 413 ~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
+++++++|.|||++||++++|+|++|+.|||+|+|.+.. .+... ++ .+ -....++|..||++|++|+++
T Consensus 430 eei~~mtT~nPAKiLGL~~kG~L~~G~~ADLvIfD~n~~-~v~~~-dl------~s---~~~~~gkV~~Tiv~GkvVv~d 498 (541)
T cd01304 430 YEIAIMTRAGPAKLLGLSDKGHLGVGADADIAIYDDDPD-QVDPS-DY------EK---VEKAFSRAAYVLKDGEIVVKD 498 (541)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccCCCCcCCEEEEeCCcC-ccCch-hh------cC---ceeecCcEEEEEECCEEEEEC
Confidence 999999999999999996579999999999999998764 33222 11 11 134556899999999999999
Q ss_pred CcccCCCCCcccc
Q 010547 493 GNHAPAACGSPIL 505 (507)
Q Consensus 493 g~~~~~~~~~~~~ 505 (507)
|+++....|+.+.
T Consensus 499 Geiv~~~~G~~l~ 511 (541)
T cd01304 499 GEVVAEPWGRTYW 511 (541)
T ss_pred CEEccCCCCcEEE
Confidence 9998877788764
No 93
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=8.9e-26 Score=210.41 Aligned_cols=418 Identities=21% Similarity=0.226 Sum_probs=234.3
Q ss_pred CCcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG 117 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~ 117 (507)
....+++|+++.|+|+.+ .+..+|-|+||+|+.|++...... ...++||+.|++|.|||||+|+|.......+
T Consensus 3 ~~~YD~ViR~g~ifDGtGnp~f~tdvgIrDGvIaav~kg~~dg~--~~~eevDaagriVaPGFIDvHtHyD~~~~~d--- 77 (579)
T COG3653 3 MVTYDVVIRDGLIFDGTGNPPFTTDVGIRDGVIAAVAKGALDGT--GCPEEVDAAGRIVAPGFIDVHTHYDAEVLLD--- 77 (579)
T ss_pred ceeeeEEEeeceEEeCCCCCccccccccccceEEEEeccccccc--CCCeeecccCcEecccEEEeeecccceeeec---
Confidence 346789999999999887 578899999999999998765432 1348999999999999999999976532221
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCC----------------------------CCHHHHHHHHHHHhcC-ceeeEEEe
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPST----------------------------ISTETLKLKVDAAEKR-IYVDVGFW 168 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~----------------------------~~~~~~~~~~~~~~~~-~~~~~~~~ 168 (507)
...+....+||||++...|+.+... +.++.+.+++++++.. ..+++...
T Consensus 78 --~~l~psv~hGVTTVv~GNCgis~ap~n~ed~d~l~s~ve~v~~e~~~~~~~~~~~w~tf~eyleale~~plgvnv~al 155 (579)
T COG3653 78 --PGLRPSVRHGVTTVVLGNCGISTAPANSEDADDLFSRVEAVGREFVFGALRDNQTWSTFAEYLEALEALPLGVNVSAL 155 (579)
T ss_pred --CCccchhhcCeeEEEecCcccccccCChhhhhhhhhhhhhcCccccccccccccccCCHHHHHHHHHhCccCCChhhh
Confidence 1235567899999998654322111 1233444455544432 12333322
Q ss_pred ccc-------------cCCCcc------cHHHHHHHHHcCCcEEEEc--ccCCCC-----CCCCCCCHHHHHHHHHHHHh
Q 010547 169 GGL-------------VPENAY------NASALEALLNAGVLGLKSF--MCPSGI-----NDFPMTNASHIKEGLSVLAR 222 (507)
Q Consensus 169 ~~~-------------~~~~~~------~~~~~~~~~~~g~~~~~~~--~~~~~~-----~~~~~~~~~~l~~~~~~a~~ 222 (507)
.+. ..+++. ..+.+.+.+++|+.|++.- +..-.. ...+..+++....++..|+.
T Consensus 156 lgH~aLR~avmg~~~a~~~p~TeaelaaMaallreAlEaGalGmS~~~~~~~~tgd~~p~~~l~~~t~el~~la~~va~a 235 (579)
T COG3653 156 LGHSALRTAVLGLDRATDDPPTEAELAAMAALLREALEAGALGMSMDAAIDKLTGDRYPSRALPFATWELRRLAISVARA 235 (579)
T ss_pred cchHHHHHHhhcccccccCCCchHHHHHHHHHHHHHHhccccccchhhhcccccccccCCcccCcchHHHHHHHHHHHHh
Confidence 211 111111 2344566677899988721 111111 12233567777777777766
Q ss_pred cCC-cEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh---
Q 010547 223 YKR-PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA--- 298 (507)
Q Consensus 223 ~~~-~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~--- 298 (507)
-+. ...+|..... ....+++.+....... ..+.++...|...+
T Consensus 236 g~~iLqst~d~~eg---------------------------aa~L~~l~~a~ri~~R------~~~vr~v~s~~a~ag~~ 282 (579)
T COG3653 236 GGRILQSTHDRDEG---------------------------AAALEALLEASRIGNR------RKGVRMVMSHSADAGSM 282 (579)
T ss_pred cCceeEeeccccch---------------------------HHHHHHHHHHHHhcCc------ccCceEEEecccccccc
Confidence 553 4444542221 1233344444444422 34667777766422
Q ss_pred -----hHHHHHHHHHHhCCCCEEEecccccccc-cc--------------------------------------------
Q 010547 299 -----SSSLDLLMEAKTNGDSITVETCPHYLAF-SA-------------------------------------------- 328 (507)
Q Consensus 299 -----~~~~~~i~~~~~~g~~i~~~~~~~~~~~-~~-------------------------------------------- 328 (507)
-.....+.+++..|.++.+.+.|.-..+ ..
T Consensus 283 n~~~a~~~lgl~~kaq~~G~pVg~~~~p~~a~~ys~~~~~p~~~e~g~~~~~~~lrD~~~R~~l~~d~~~r~~f~~~~~~ 362 (579)
T COG3653 283 NWGVAVFGLGLIEKAQLLGSPVGFDHYPYTAELYSDGIDLPVFEEFGAGTAALHLRDQLQRNELLADRSYRDSFRRIKLG 362 (579)
T ss_pred chhhhhhccchHHHHHHhCCcceeeecccccchhccCCcchhhhhcccchhhhhhcCHHHHHHHHhhhhhcchhhhcccc
Confidence 1345566666666777766555432200 00
Q ss_pred -cCCCCCCCceeEcCCCCChhhH--------------HHHHHHHhc-----CCeeEEeCCCCCCChhhhccc--------
Q 010547 329 -EEIPDGDTRFKCAPPIRDAANK--------------EKLWEALMD-----GHIDMLSSDHSPTVPELKLLD-------- 380 (507)
Q Consensus 329 -~~~~~~~~~~~~~p~~~~~~~~--------------~~~~~~l~~-----G~~~~lgtD~~~~~~~~~~~~-------- 380 (507)
+.+.+....+..+|+.....++ +.+.+.+.. |-..++--++.+-+.+..+..
T Consensus 363 ~~~W~n~~~vi~~~pd~p~~agKsl~aIAd~~grdp~da~lD~Lardg~~~~~~~~i~an~s~e~l~rilahp~tviG~s 442 (579)
T COG3653 363 PSLWHNHDIVITESPDKPELAGKSLKAIADERGRDPLDAFLDVLARDGERAGRWTTIVANMSPEDLNRILAHPSTVIGFS 442 (579)
T ss_pred cccccccceeEEeCCCCchhhhhhHHHHHHHhCCCHHHHHHHHHHhcccccceeEEEEecCCcchHHHHhcCCccccccC
Confidence 0000111223334432111110 111112221 212223333222222111100
Q ss_pred -cCCccccCCCCchhhhHHHHHHHHHHhc----CCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeC
Q 010547 381 -EGNFLKAWGGISSLQFVLPVTWSYGRKY----GVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELD 455 (507)
Q Consensus 381 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~----gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~ 455 (507)
.|.....+ .+.++.. ..+.++.++. -++++.+++-.|..+|+.+|+.++|.|.+|+.|||+|+|+....+..
T Consensus 443 d~gahl~~~-~~~~f~~--rvL~~~~rer~~gp~l~Le~av~rmT~~~Ae~~GL~drGlvreG~rADl~viDp~~vr~~a 519 (579)
T COG3653 443 DAGAHLPHP-RFYGFFP--RVLKRYRRERRAGPLLSLERAVRRMTGELAEWFGLGDRGLVREGDRADLVVIDPHLVRDVA 519 (579)
T ss_pred CCCCCCCcc-cccccch--HHHHHHHhhhccCCcccHHHHHHHHhccHHHHhCcccccccccccccceEEEccccccccc
Confidence 00000000 1111111 2223333332 39999999999999999999977899999999999999987655432
Q ss_pred CCCCcccCCCCCccccCcEEe---eEEEEEEECCEEEEecCcccC-CCCCccccc
Q 010547 456 NDHPVHMKHPSISAYLGRRLS---GKVLATISRGNLVYKEGNHAP-AACGSPILA 506 (507)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G~~v~~~g~~~~-~~~~~~~~~ 506 (507)
-+.++ ..|+.|+... -.|..|.|+|.+.+++|++++ ..+||++|+
T Consensus 520 -----~y~~~-~lPa~G~~~~~vn~~~vat~v~Gvvs~rdGe~tg~~~aGR~lR~ 568 (579)
T COG3653 520 -----TYTEP-ALPAYGILRVMVNRNVVATGVGGVVSFRDGEFTGQVKAGRYLRA 568 (579)
T ss_pred -----cccCc-cCCCCcceEEEEeccceeeecceeEEEecCcccCcccccchhcc
Confidence 23455 6677665543 236677888999999999998 799999986
No 94
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.96 E-value=6.5e-27 Score=211.14 Aligned_cols=357 Identities=21% Similarity=0.246 Sum_probs=217.9
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccC-----CCCCCCCCC--
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD-----DPGRTEWEG-- 117 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~-----~~~~~~~~~-- 117 (507)
+++.|++|+..|.+.++.|+|+||+|..|...... ....+|+.|.+++|||||+|+--- ..+...|..
T Consensus 1 ~~lsnarivl~D~v~~gsv~i~DG~Ia~i~~g~s~-----~~~~~d~eGd~LLPGlIeLHtD~lE~~~~PRPgV~wp~~a 75 (377)
T COG3454 1 MILSNARIVLEDRVVNGSVLIRDGLIADIDEGISP-----LAAGIDGEGDYLLPGLIELHTDNLERFMTPRPGVRWPPIA 75 (377)
T ss_pred CccccceEEeecceeeeeEEEecceEeeeccccCc-----ccccccCCCCeecccchhhcchhhhcccCCCCCCCCCchH
Confidence 36889999999999999999999999999877543 256789999999999999999332 223333332
Q ss_pred -hhHHHHHHHhCCceEEEeCCC--CCCCCCCCHHHHHHHHHHHh-----cCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 118 -FPSGTKAAAAGGITTLIDMPL--NSDPSTISTETLKLKVDAAE-----KRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 118 -~~~~~~~~l~~GvTt~~~~~~--~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.......+..|+||+.+... .........+.+...++.+. +....+-.++.......+...+.++++.+.+
T Consensus 76 Ai~ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~~~p 155 (377)
T COG3454 76 AILAHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLMDHP 155 (377)
T ss_pred HHHHhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHhcCC
Confidence 233445778999999998641 11112222334455444443 3445566777777777778888999999988
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
...+...|.+..+ .. ....+.+-.+..++ +++ ....+ ...+.... . .........
T Consensus 156 ~v~LiSlMDH~PG--Qr--Qf~~le~Y~~yy~~k~~~------s~~e~-~~~i~~r~-a------------~~~~y~~~~ 211 (377)
T COG3454 156 RVKLISLMDHTPG--QR--QFANLEKYREYYQGKRGL------SDEEF-AEFIEERQ-A------------LSARYSDPN 211 (377)
T ss_pred CeeEEEecCCCCC--cc--hhhhHHHHHHHHHhhcCC------CHHHH-HHHHHHHH-H------------HHhhcccch
Confidence 8887777755321 11 11111111111111 111 00000 00000000 0 000011112
Q ss_pred HHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCC-CC-
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI-RD- 346 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~- 346 (507)
...+..++.+. |+. ...| .+.+.+.+++....|+.+.- +|..+.........+-...+..|.+ |.
T Consensus 212 r~~i~~~c~~r-------gI~-lASH---DDaT~~hV~es~~~Gv~iAE--FPtT~eAA~asr~~Gm~VlMGAPNivrGg 278 (377)
T COG3454 212 RQAIAALCRER-------GIA-LASH---DDATVEHVAESHGLGVAIAE--FPTTVEAAKASRELGMQVLMGAPNIVRGG 278 (377)
T ss_pred HHHHHHHHHHc-------CCc-eecC---CcCcHHHHHHHHhcCeeEEe--CccHHHHHHHHHHhCchhhcCCCceeccC
Confidence 34455555543 322 1223 22456667777677765543 3433333333333334445566664 33
Q ss_pred -hhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhc-CCCHHHHHHHHhhchh
Q 010547 347 -AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKY-GVTLEQLASWWSERPA 424 (507)
Q Consensus 347 -~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-gls~~~al~~~T~n~A 424 (507)
.+..-+..++.+.|+.+.++||+.|.+. +...+..+.+. .+++++|++++|.|||
T Consensus 279 SHsGNvsA~ela~~glLDiLsSDY~P~SL-----------------------l~A~F~La~~~~~~~lpqAvalvt~nPA 335 (377)
T COG3454 279 SHSGNVSARELAQHGLLDILSSDYVPASL-----------------------LHAAFRLADLGSNISLPQAVALVTKNPA 335 (377)
T ss_pred CcccchhHHHHHhCCceeeecccCCcHHH-----------------------HHHHHHHhhhhcccCHHHHHHHhccCHH
Confidence 3334455778888999999999987654 33333344333 3589999999999999
Q ss_pred HHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEE
Q 010547 425 KLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVY 490 (507)
Q Consensus 425 ~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~ 490 (507)
+++|+.++|+|++|++||||.+..+.. .+ .|..||+.||.|+
T Consensus 336 ~algl~DRG~Ia~GlrADlv~v~~~~~------------vp------------~ir~vwr~G~rv~ 377 (377)
T COG3454 336 RALGLTDRGRIAPGLRADLVRVRRDGG------------VP------------VIRTVWRAGKRVA 377 (377)
T ss_pred HhcCCCcccccccccccceEEEecCCC------------Cc------------eeeeeeecceecC
Confidence 999998899999999999998876542 13 6899999999874
No 95
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=1.3e-27 Score=223.84 Aligned_cols=358 Identities=15% Similarity=0.109 Sum_probs=202.2
Q ss_pred eeeEEEeC-CEEEEeecCCCCCCCC-------CCCcEEecCCCEEecceeecccccC-CC-----C----CCCC------
Q 010547 60 SGAVEIKE-GNIISIVSEEDWPRNS-------KTGQVVDYGEAVIMPGLIDVHAHLD-DP-----G----RTEW------ 115 (507)
Q Consensus 60 ~~~I~I~d-G~I~~Vg~~~~~~~~~-------~~~~viD~~g~~v~PGfID~H~H~~-~~-----~----~~~~------ 115 (507)
+..+.|.| |+|+.|++....+... +..++++.+|+++||||||+|+|+. +. + ...|
T Consensus 27 ~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~wl~~~~f 106 (439)
T KOG3968|consen 27 GSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQWLGKYTF 106 (439)
T ss_pred CcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHHhhccee
Confidence 45568876 9999999876554211 2457899999999999999999941 10 0 0000
Q ss_pred -------------CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcc-----
Q 010547 116 -------------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY----- 177 (507)
Q Consensus 116 -------------~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 177 (507)
+.+....++++++||||+..+. + -..+....+.+.......+..+.....-.-.-..+.
T Consensus 107 ~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~--~-~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~~~p~~~~~~ 183 (439)
T KOG3968|consen 107 PLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFS--T-LHLDSELLLARAAIRAGQRALIGKVCMDCNAHAVPKGVETT 183 (439)
T ss_pred ecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhh--c-cCchhHHHHHHHHHHhCCceeeeeehhccCCCCCCccchhH
Confidence 1234556789999999998764 1 222333333343333333444333221101001111
Q ss_pred --c----HHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC-CcccchhhhhcccCcCCc
Q 010547 178 --N----ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE-MEKGSERHVKLEDDTLDT 250 (507)
Q Consensus 178 --~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~-~~~~~~~~~~~~~~~~~~ 250 (507)
. .+.+..+.+.+........ .+...+.++.+.+....++|+.++.++++|.. +..++....
T Consensus 184 E~si~~t~~~i~~~~~~~~~~~~~~v---t~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~--------- 251 (439)
T KOG3968|consen 184 EESIESTEDLIPKLEKLKREKVNPIV---TPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVK--------- 251 (439)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCcc---cccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHH---------
Confidence 1 1122222222211111100 11334568888889888999999999999964 333322111
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccC
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 330 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~ 330 (507)
..+|+...+..+.....++.+. ..-.|..|++.. .+.-+.++|..+. +||..-..
T Consensus 252 -------~ff~~~~~y~~~yd~~~lL~~k-------tvlaH~~hl~d~-----ei~~l~k~g~svs--hCP~Sn~~---- 306 (439)
T KOG3968|consen 252 -------NFFPEKLSYTDVYDKGGLLTEK-------TVLAHLEHLSDE-----EIELLAKRGCSVS--HCPTSNSI---- 306 (439)
T ss_pred -------HhhhhcccchHHHHHhcccchH-------hHhhhheecCch-----hHHHHHhcCCceE--ECCcchhh----
Confidence 1122222222222222222211 233677777763 4444555565544 46631110
Q ss_pred CCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcC
Q 010547 331 IPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYG 409 (507)
Q Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~g 409 (507)
.......+.++++.|+.+.+|||-++++....++. ...+...+... ....
T Consensus 307 ---------------L~sG~~~vr~lL~~~v~VgLGtDv~~~s~l~a~r~--------------A~~~s~hL~~~~~~~~ 357 (439)
T KOG3968|consen 307 ---------------LGSGIPRVRELLDIGVIVGLGTDVSGCSILNALRQ--------------AMPMSMHLACVLDVMK 357 (439)
T ss_pred ---------------hccCCccHHHHHhcCceEeecCCccccccHHHHHH--------------HHHHHHHHHhccCccc
Confidence 11223356788999999999999887554432211 11122222212 2357
Q ss_pred CCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee---EEEEEEEC
Q 010547 410 VTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG---KVLATISR 485 (507)
Q Consensus 410 ls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~V~~v~v~ 485 (507)
+|++|++.+||.|+|++||+ +..|++++||++|++++|.+.+... ++.-....+.+.-+...| .|..|||+
T Consensus 358 Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~~~~-----l~~~~~~~~lI~~~v~~g~drni~~V~V~ 432 (439)
T KOG3968|consen 358 LSMEEALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAPESP-----LYRFSGHHDLISKVVYNGDDRNIAEVFVA 432 (439)
T ss_pred CCHHHHHHHHhccchhhccCCCcccceecccccceEEEeCCCCcch-----hhhccchHHHHHHHHhcCCCCceEEEEEc
Confidence 99999999999999999999 7799999999999999998875221 111110022333334445 79999999
Q ss_pred CEEEEe
Q 010547 486 GNLVYK 491 (507)
Q Consensus 486 G~~v~~ 491 (507)
||.|+.
T Consensus 433 Gk~v~~ 438 (439)
T KOG3968|consen 433 GKLVKQ 438 (439)
T ss_pred cEEecc
Confidence 999974
No 96
>PRK06846 putative deaminase; Validated
Probab=99.95 E-value=2.6e-25 Score=223.90 Aligned_cols=352 Identities=16% Similarity=0.158 Sum_probs=206.1
Q ss_pred eEEEEecEEECCCC----------ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC
Q 010547 44 QYWLTSKRIVTPKG----------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT 113 (507)
Q Consensus 44 ~~~i~n~~i~~~~~----------~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~ 113 (507)
.+.|+|+++..+.. ....+|.|+||+|++|++....+. .+.++||++|++|+|||||+|+|+......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~--~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~ 82 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQVPD--ATLPTYDANGLLMLPAFREMHIHLDKTYYG 82 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCCCC--CCCceEeCCCCEEecCEEeeeecccchhhc
Confidence 45677777654322 246799999999999998632211 246899999999999999999999753211
Q ss_pred -CCC------------------------Ch----hHHHHHHHhCCceEEEeCCCCCCCCCC--CHHHHHHHHHHHhcCce
Q 010547 114 -EWE------------------------GF----PSGTKAAAAGGITTLIDMPLNSDPSTI--STETLKLKVDAAEKRIY 162 (507)
Q Consensus 114 -~~~------------------------~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~ 162 (507)
... .. ......++++|+|+++++. ...|... ..+.+.+..+.......
T Consensus 83 ~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~a~~~l~~~~~~Gtt~~r~~v-~~~~~~~~~~~~a~~e~l~e~~~~v~ 161 (410)
T PRK06846 83 GPWKACRPAKTIQDRIELEQKELPELLPTTQERAEKLIELLQSKGATHIRSHC-NIDPVIGLKNLENLQAALERYKDGFT 161 (410)
T ss_pred cchhhcCCcccHHHHHhhhhhhHHHhHHHHHHHHHHHHHHHHhCCccEEEEEE-eeCcccccchHHHHHHHHHHhhCcce
Confidence 000 00 1234456688999988775 3333221 12222233333332222
Q ss_pred eeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhh
Q 010547 163 VDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVK 242 (507)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 242 (507)
..+..+...........+.+++..+.|+..++.+ .+ ......+++.+.++++.|+++|.++.+|..+...
T Consensus 162 ~~~~a~~~~g~~~~~~~~lL~~al~~Ga~~i~gl-~p---~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~------ 231 (410)
T PRK06846 162 YEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGV-DP---ASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGP------ 231 (410)
T ss_pred EEEEeccCcccCCccHHHHHHHHHHcCCCEEeCC-CC---ccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCC------
Confidence 2222211100001334567888888888755542 11 2223567889999999999999999999854321
Q ss_pred cccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC-----hhHHHHHHHHHHhCCCCEEE
Q 010547 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-----ASSSLDLLMEAKTNGDSITV 317 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~-----~~~~~~~i~~~~~~g~~i~~ 317 (507)
.....+++..+...+.+. .+ ++++.|+.. ..+..+.++.+++.|+.+..
T Consensus 232 ---------------------~~~~~~~~~~~~~~~~gl----~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~ 285 (410)
T PRK06846 232 ---------------------LGVATIKYLVETTEEAQW----KG-KVTISHAFALGDLNEEEVEELAERLAAQGISITS 285 (410)
T ss_pred ---------------------hhHHHHHHHHHHHHHhCC----CC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 011223445555555421 13 688888863 11333346678888876653
Q ss_pred ecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCC--CChhhhccccCCccccCCCCchhh
Q 010547 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP--TVPELKLLDEGNFLKAWGGISSLQ 395 (507)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 395 (507)
. .+ + + ....++.++++.|+++++|||+.. ++... ....++
T Consensus 286 ~-~~----~--------~------------~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~~-------------~~d~~~ 327 (410)
T PRK06846 286 T-VP----I--------G------------RLHMPIPLLHDKGVKVSLGTDSVIDHWSPFG-------------TGDMLE 327 (410)
T ss_pred e-CC----C--------C------------CCCCCHHHHHhCCCeEEEecCCCCCCCcCCC-------------CCCHHH
Confidence 1 11 0 0 011235677888999999999752 11110 111111
Q ss_pred hHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCc
Q 010547 396 FVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGR 473 (507)
Q Consensus 396 ~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (507)
. +........ ...-++.++++++|.+ |+.+++ ..+|+|++||.||||++|.+.+... .
T Consensus 328 ~-~~~~~~~~~~~~~~~~~~~l~~~T~~-a~~l~~~~~~G~l~~G~~ADlvlld~~~~~~~------------------~ 387 (410)
T PRK06846 328 K-ANLLAELYRWSDERSLSRSLALATGG-VLPLNDEGERVWPKVGDEASFVLVDASCSAEA------------------V 387 (410)
T ss_pred H-HHHHHHHhcCCCHHHHHHHHHHHcCC-ccccccCCCccCCCCCCcccEEEEeCCChHHH------------------H
Confidence 1 111111000 0012345899999988 456787 6679999999999999997642211 0
Q ss_pred EEeeEEEEEEECCEEEEec
Q 010547 474 RLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 474 ~~~~~V~~v~v~G~~v~~~ 492 (507)
.....|..||++|++||..
T Consensus 388 ~~~~~v~~v~~~G~~v~~~ 406 (410)
T PRK06846 388 ARQSPRTAVFHKGQLVAGS 406 (410)
T ss_pred HhcCCceEEEECCEEEeee
Confidence 1113699999999999974
No 97
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=7.3e-27 Score=230.72 Aligned_cols=289 Identities=22% Similarity=0.124 Sum_probs=176.1
Q ss_pred CcEEecCCCEEecceeecccccCCCCCCCCC-----------ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHH
Q 010547 86 GQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE-----------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKV 154 (507)
Q Consensus 86 ~~viD~~g~~v~PGfID~H~H~~~~~~~~~~-----------~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~ 154 (507)
+++||++|++|+|||||+|+|+......... ......+.++++||||+++++ +..+. . +....
T Consensus 1 ~~vID~~g~~v~PGliD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g-~~~~~----~-~~~~~ 74 (342)
T cd01299 1 AQVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRDAG-GADYG----L-LRDAI 74 (342)
T ss_pred CcEEeCCCCEECCCeeeeeeeccccCCCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeCC-CcchH----H-HHHHH
Confidence 3689999999999999999998664222111 112457788999999999986 22111 1 22222
Q ss_pred HHHhc-Ccee--------------eEEE---------eccccCCCcccHHHHHHHHHcCCcEEEEcccCCC-----CCCC
Q 010547 155 DAAEK-RIYV--------------DVGF---------WGGLVPENAYNASALEALLNAGVLGLKSFMCPSG-----INDF 205 (507)
Q Consensus 155 ~~~~~-~~~~--------------~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~ 205 (507)
..... ...+ ++.. +.......++..+.++++.+.|+..+|.|+.... ..+.
T Consensus 75 ~~g~~~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~g~~~~~~~~~~~ 154 (342)
T cd01299 75 DAGLIPGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMATGGVLSPGDPPPD 154 (342)
T ss_pred HcCCccCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEeccCCcCCCCCCCcc
Confidence 21111 0111 1000 0111122233466788888899999999874321 1112
Q ss_pred CCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCC
Q 010547 206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (507)
Q Consensus 206 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 285 (507)
+..+++.+.++++.|++.++++.+|+.... .+...++.
T Consensus 155 ~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~--------------------------------~i~~~l~~---------- 192 (342)
T cd01299 155 TQFSEEELRAIVDEAHKAGLYVAAHAYGAE--------------------------------AIRRAIRA---------- 192 (342)
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEEEeCCHH--------------------------------HHHHHHHc----------
Confidence 357899999999999999999999995422 12233322
Q ss_pred CCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCC-C------ChhhHHHHHHHHh
Q 010547 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI-R------DAANKEKLWEALM 358 (507)
Q Consensus 286 ~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~------~~~~~~~~~~~l~ 358 (507)
|. ..+.|+.. ...+.++.+++.|+.+. +|+......... . .....++- . .......+.++.+
T Consensus 193 -G~-~~i~H~~~--~~~~~~~~l~~~g~~~~--~t~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (342)
T cd01299 193 -GV-DTIEHGFL--IDDETIELMKEKGIFLV--PTLATYEALAAE----G-AAPGLPADSAEKVALVLEAGRDALRRAHK 261 (342)
T ss_pred -CC-CEEeecCC--CCHHHHHHHHHCCcEEe--CcHHHHHHHHhh----c-cccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 13677765 33456777888887654 344321110000 0 00000000 0 1123356678888
Q ss_pred cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCcccc
Q 010547 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAI 437 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~ 437 (507)
.|+++++|||....... +.. +...+....+.+++++++++++|.|||+++|+ +++|+|++
T Consensus 262 ~Gv~v~~GTD~~~~~~~--------------~~~-----~~~e~~~~~~~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~ 322 (342)
T cd01299 262 AGVKIAFGTDAGFPVPP--------------HGW-----NARELELLVKAGGTPAEALRAATANAAELLGLSDELGVIEA 322 (342)
T ss_pred cCCeEEEecCCCCCCCc--------------hhH-----HHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCccCCcceECC
Confidence 99999999997631100 000 11223344567899999999999999999999 67899999
Q ss_pred CCCCcEEEEcCCCce
Q 010547 438 GNHADLVVWEPEAEF 452 (507)
Q Consensus 438 G~~ADlvvld~~~~~ 452 (507)
||.|||+++|.|+..
T Consensus 323 G~~ADlvvl~~~pl~ 337 (342)
T cd01299 323 GKLADLLVVDGDPLE 337 (342)
T ss_pred CCcCCEEEECCChhh
Confidence 999999999987643
No 98
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.95 E-value=2.6e-26 Score=227.77 Aligned_cols=175 Identities=20% Similarity=0.280 Sum_probs=120.1
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---CCCChhHH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGFPSG 121 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~---~~~~~~~~ 121 (507)
++|+|++|+++....+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+..+... ..+.+...
T Consensus 1 ~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~vid~~g~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~ 77 (374)
T cd00854 1 LIIKNARILTPGGLEDGAVLVEDGKIVAIGPEDELE---EADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALKTI 77 (374)
T ss_pred CEEEeEEEeCCCEEcccEEEEECCEEEEecCCCCcc---cCCcEEECCCCEecccEEEeeecccCCCCCCCCCHHHHHHH
Confidence 479999999984456789999999999998765432 246899999999999999999999754221 24667788
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC---ceeeEEEeccccCCCc-----------ccHHHHHHHHH
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR---IYVDVGFWGGLVPENA-----------YNASALEALLN 187 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 187 (507)
.+.++++||||+++++ .+.+.....+.+....+..+.. ....++..+++..... ...++++++.+
T Consensus 78 ~~~~~~~GvTtv~~t~-~t~~~~~~~~~l~~~~~~~~~~~g~~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~ 156 (374)
T cd00854 78 AEALAKHGTTSFLPTT-VTAPPEEIAKALAAIAEAIAEGQGAEILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKKWLE 156 (374)
T ss_pred HHHHHccCcceeeccc-cCCCHHHHHHHHHHHHHHhhcCCCCeeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHHHHH
Confidence 8899999999999876 3333333333444444444332 1222334444432211 13467788887
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHH--HHHHHHHHhcCCcEE-EecCC
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHI--KEGLSVLARYKRPLL-VHAEM 233 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~a~~~~~~v~-~H~~~ 233 (507)
.+...+|.+. ..+|.. .++++.++++|+++. .|...
T Consensus 157 ~~~~~ik~~t----------laPE~~~~~~~i~~~~~~gi~v~~GH~~a 195 (374)
T cd00854 157 AAGGLIKLVT----------LAPELDGALELIRYLVERGIIVSIGHSDA 195 (374)
T ss_pred hcCCCEEEEE----------ECCCCCChHHHHHHHHHCCeEEEeeCCcC
Confidence 7776777752 233444 688999999999995 88753
No 99
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.95 E-value=6.4e-25 Score=218.07 Aligned_cols=337 Identities=20% Similarity=0.241 Sum_probs=190.2
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCC-CEEecceeecccccCCCCCCCCCChhHHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g-~~v~PGfID~H~H~~~~~~~~~~~~~~~~ 122 (507)
+++|+|++|+++. ..+|+|+||||++|++....+ +.++||++| ++|+|||||+|+|+..+.....++..
T Consensus 2 ~~~i~n~~i~~~~---~~~v~i~~g~I~~v~~~~~~~----~~~~iD~~g~~~l~PG~ID~H~H~~~~~~~~~~~~~--- 71 (365)
T TIGR03583 2 DLLIKNGRTVNGT---PVDIAIEDGKIAAVGTTITGS----AKQTIDLEGETYVSAGWIDDHTHCFPKSALYYDEPD--- 71 (365)
T ss_pred cEEEECcEEecCC---eeEEEEECCEEEEecCCCCCC----CCeEEECCCCeEEecCEEEeeeccCCCcccccCCHh---
Confidence 5899999999853 458999999999998643322 468999999 99999999999999865443333332
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc--eeeEEEeccccCC-C-----cccHHHHHHHHH---cCCc
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLVPE-N-----AYNASALEALLN---AGVL 191 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~-----~~~~~~~~~~~~---~g~~ 191 (507)
..++++|||++++++ .+.+ ...+.+....+....+. .++....+ ..+. . ....++++++.. .++.
T Consensus 72 ~~a~~~GvTt~~~~~-~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~G-~~~~~~~~~~~~~~~~~l~~~~~~~~~~vv 147 (365)
T TIGR03583 72 EIGVKTGVTTVVDAG-STGA--DDIDDFYRLAQQAKTNVFALLNISRIG-LVAQDELADLSNLDASAVKQAVERYPDFIV 147 (365)
T ss_pred HhhhcCceeEEEeCC-CCCC--CCHHHHHHHHHhhCCcEEEEeeehhcc-ccChhhhhChHHhHHHHHHHHHHhCcCcEE
Confidence 446899999999876 2222 44555555544433221 12222122 2111 1 112334443443 2466
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHH
Q 010547 192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271 (507)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 271 (507)
+++.+++.....+. ..++..+.+.+..+ +.+.++.+|+..... +. .+
T Consensus 148 ~~~~~~t~~~i~E~-gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~----------------------------~~---~~ 194 (365)
T TIGR03583 148 GLKARMSKSVVGDN-GIEPLEIAKQIQQE-NLELPLMVHIGSAPP----------------------------EL---DE 194 (365)
T ss_pred EEEEeecccccccC-CcCHHHHHHHHHHh-cCCCcEEEEeCCCcc----------------------------CH---HH
Confidence 77777653221221 22354555555444 689999999965432 11 22
Q ss_pred HHHHHHhhccCCCCCCceEEEEecCChh---------HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcC
Q 010547 272 LLTVAKDTRTDGPAEGAHLHIVHLSDAS---------SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAP 342 (507)
Q Consensus 272 ~~~l~~~~~~~~~~~g~~~~~~h~~~~~---------~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p 342 (507)
++..... |. ...|+.+.. ...+.+......|+-+...+...
T Consensus 195 i~~~~~~--------g~--~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~-------------------- 244 (365)
T TIGR03583 195 ILALMEK--------GD--VLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTA-------------------- 244 (365)
T ss_pred HHHHhcC--------CC--eeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCC--------------------
Confidence 2222211 31 356665421 12245555555564433221000
Q ss_pred CCCChhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhh
Q 010547 343 PIRDAANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSE 421 (507)
Q Consensus 343 ~~~~~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~ 421 (507)
........++...++ .++.++|.... +...+-...+...++.+...|++++++++++|.
T Consensus 245 ----~~~~~~~~~~~~~~~~~~td~~d~~~~----------------~~~~gp~~~l~~~~~~~~~~g~~~~ea~~~~t~ 304 (365)
T TIGR03583 245 ----SFSFHVAEKAKRAGIFPDTISTDIYIR----------------NRINGPVYSLATVMSKFLALGYSLEEVIEKVTK 304 (365)
T ss_pred ----CchHHHHHHHHhCCCCCcccccccccC----------------CCccCccccHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 001111222233342 24445553110 011222222444455444679999999999999
Q ss_pred chhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeE----EEEEEECCEEE
Q 010547 422 RPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGK----VLATISRGNLV 489 (507)
Q Consensus 422 n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----V~~v~v~G~~v 489 (507)
|||++||+++.|+|++|+.|||+++|.++.... ..-.+|.++.+. ...|+++|+..
T Consensus 305 npa~~~gl~~~g~i~~g~~ad~~~~~~~~~~~~------------~~~~~g~~~~~~~~~~~~~~~~~~~~~ 364 (365)
T TIGR03583 305 NAAEILKLTQKGRLQEGYDADLTIFTVKAEPKK------------LTDSEGDSRIAEEQIKPLAVIIGGEYY 364 (365)
T ss_pred HHHHHhCCCCCCCcCCCCcccEEEEecCCCCce------------eecCCCCEEEeccccceEEEEECCEEe
Confidence 999999995589999999999999997542211 111223333322 56788898864
No 100
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=4.3e-25 Score=216.81 Aligned_cols=296 Identities=21% Similarity=0.294 Sum_probs=186.5
Q ss_pred eEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCC
Q 010547 62 AVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSD 141 (507)
Q Consensus 62 ~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~ 141 (507)
+|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..++....+ ...+.++++||||+++++ ...
T Consensus 1 ~i~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~---~~~~~a~~~GvTtvvd~~-~~~ 73 (338)
T cd01307 1 DVAIENGKIAAVGAALAAP---AATQIVDAGGCYVSPGWIDLHVHVYQGGTRYGD---RPDMIGVKSGVTTVVDAG-SAG 73 (338)
T ss_pred CEEEECCEEEEccCCCCCC---CCCeEEECCCCEEecCeEEeeecCCCCCcccCC---CHhHHHHcCceeEEEeCC-CCC
Confidence 5899999999999864332 247899999999999999999999887654333 367788999999999997 333
Q ss_pred CCCCCHHHHHHHH-HHHhc--CceeeEEEeccccCCC-cc----cHHHHHHH---HHcCCcEEEEcccCCCCCCCCCCCH
Q 010547 142 PSTISTETLKLKV-DAAEK--RIYVDVGFWGGLVPEN-AY----NASALEAL---LNAGVLGLKSFMCPSGINDFPMTNA 210 (507)
Q Consensus 142 p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~-~~----~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~ 210 (507)
+ ...+.+.... +.... ..++++.+++...... ++ ..+.+.+. ...|+.+++.++...... ....
T Consensus 74 ~--~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~e~~~gi~gik~~~~~~~~~---~~~~ 148 (338)
T cd01307 74 A--DNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDPDNIDEDAVVAAAREYPDVIVGLKARASKSVVG---EWGI 148 (338)
T ss_pred C--CCHHHHHHHHHHhhhceEEEEEeeeccccccccccCChhHCCHHHHHHHHHHCcCcEEEEEEEeeccccc---ccCC
Confidence 3 4455533333 34443 4566666665442211 11 12222222 346888898876432211 1233
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceE
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL 290 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 290 (507)
..++...+.+++.+.++.+|++.... + +...+.+... + .
T Consensus 149 ~~l~~~~~~a~~~~~pi~vH~~~~~~----------------------------~---~~~~~~~l~~--------g--~ 187 (338)
T cd01307 149 KPLELAKKIAKEADLPLMVHIGSPPP----------------------------I---LDEVVPLLRR--------G--D 187 (338)
T ss_pred cHHHHHHHHHHHcCCCEEEEeCCCCC----------------------------C---HHHHHHHhcC--------C--C
Confidence 44888999999999999999965432 1 1222222221 3 2
Q ss_pred EEEecCChh---------HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC
Q 010547 291 HIVHLSDAS---------SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361 (507)
Q Consensus 291 ~~~h~~~~~---------~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 361 (507)
...|+.... ...+.++++.+.|..+...... .........+++++|+
T Consensus 188 ~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~------------------------~~~~~~~~~~l~~~G~ 243 (338)
T cd01307 188 VLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGT------------------------ASFSFRVARAAIAAGL 243 (338)
T ss_pred EEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCC------------------------CchhHHHHHHHHHCCC
Confidence 355554320 0135677777777653321100 0011123345677786
Q ss_pred -eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 362 -IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 362 -~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
..++++|....... .+....+...+......+++++++++++|.|||++||+++.|+|++|+.
T Consensus 244 ~~~~lstD~~~~~~~----------------~~p~~~l~~~l~~l~~~gi~~ee~~~~~T~NpA~~lgl~~~G~l~~G~~ 307 (338)
T cd01307 244 LPDTISSDIHGRNRT----------------NGPVYALATTLSKLLALGMPLEEVIEAVTANPARMLGLAEIGTLAVGYD 307 (338)
T ss_pred CCeeecCCccccCCC----------------CCccccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCCc
Confidence 46899997422110 0011113333444456799999999999999999999966899999999
Q ss_pred CcEEEEcCCC
Q 010547 441 ADLVVWEPEA 450 (507)
Q Consensus 441 ADlvvld~~~ 450 (507)
|||++++.+.
T Consensus 308 ad~~v~~~~~ 317 (338)
T cd01307 308 ADLTVFDLKD 317 (338)
T ss_pred CCEEEEeCCC
Confidence 9999999764
No 101
>PLN02599 dihydroorotase
Probab=99.95 E-value=5.6e-25 Score=213.68 Aligned_cols=296 Identities=20% Similarity=0.217 Sum_probs=225.0
Q ss_pred EEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC--ceeeEEEecccc
Q 010547 95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLV 172 (507)
Q Consensus 95 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 172 (507)
+.+|---|+|.|+-++. +....--+.++|+|+++++| ++.|.....+.+..+.+.+... ..+++.+++++.
T Consensus 23 ~~~~~~~d~h~hlr~~~------~~~~~~~~~~gg~t~~i~MP-n~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l~ 95 (364)
T PLN02599 23 LTITRPDDWHLHLRDGA------KLAAVVPHSARHFGRAIVMP-NLKPPVTTTARALAYRERIMKALPPGSSFEPLMTLY 95 (364)
T ss_pred EEecCCcceeeEccCcH------HHHhhhHHhcCCcCEEEECC-CCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEEe
Confidence 56899999999998843 55666778899999999999 8889999999998888888766 457888887673
Q ss_pred CCCcccHHHHHHHHHcCCc-EEEEcccCCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc
Q 010547 173 PENAYNASALEALLNAGVL-GLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 250 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 250 (507)
.......++++++.+.|+. ++|.|+...+.+ +.+..+.+.+..+++.+++.|+++.+|+|+.+......
T Consensus 96 lt~~~~l~Ei~~~~~~Gvv~gfKlyp~~~tt~s~~gv~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~--------- 166 (364)
T PLN02599 96 LTDNTTPEEIKAAKASGVVFAVKLYPAGATTNSQAGVTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIF--------- 166 (364)
T ss_pred cCCCCCHHHHHHHHHCCCcEEEEECcccCcCCCccccCCHHHHHHHHHHHHhcCCEEEEecCCCccccccc---------
Confidence 3333457888888889999 999986432211 22233468999999999999999999998754311000
Q ss_pred cccccccCCCChhHHHHHHHHHHH--HHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLT--VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~--l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
..+...+.+.++ +.+ .++.++|+.|+++. .+++.++.+++ + ++++++||||+.++.
T Consensus 167 ------------~~E~~~i~r~l~~~la~-------~~g~kI~i~HiSt~-~~ve~v~~ak~-~-~vtae~tpHhL~l~~ 224 (364)
T PLN02599 167 ------------DREKVFIDTILAPLVQK-------LPQLKIVMEHITTM-DAVEFVESCGD-G-NVAATVTPQHLLLNR 224 (364)
T ss_pred ------------ccHHHHHHHHHHHHHHh-------ccCCeEEEEecChH-HHHHHHHhccC-C-CEEEEecHHHHhcCH
Confidence 012233455553 334 34889999999998 99999998874 3 899999999999999
Q ss_pred cCCC--CCCCceeEcCCCCChhhHHHHHHHHhcCCe-eEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH
Q 010547 329 EEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHI-DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG 405 (507)
Q Consensus 329 ~~~~--~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~-~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 405 (507)
+++. ..+..++++||+|...+++.+++++.+|.+ +.++|||+|+....+....| ..|+......++.+....
T Consensus 225 ~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g-----~~Gi~~~~~~l~~l~~~~ 299 (364)
T PLN02599 225 NALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCG-----CAGIYSAPVALSLYAKAF 299 (364)
T ss_pred HHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCC-----CCCcccHHHHHHHHHHHH
Confidence 9876 356779999999999999999999999996 89999999998766531111 123333333567655555
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCCC-CCCc
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQV-SKGA 434 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl~-~~G~ 434 (507)
.+.| ++++++++++.|||+.+|++ ++|+
T Consensus 300 ~~~g-~l~~l~~~~S~npA~~~gL~~~kg~ 328 (364)
T PLN02599 300 EEAG-ALDKLEAFTSFNGPDFYGLPRNTST 328 (364)
T ss_pred HhcC-CHHHHHHHHhHHHHHHhCCCCCCCe
Confidence 5556 99999999999999999994 5555
No 102
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=3.2e-25 Score=218.74 Aligned_cols=311 Identities=23% Similarity=0.252 Sum_probs=180.7
Q ss_pred CCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC----------CCC-------------ChhHHHH
Q 010547 67 EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT----------EWE-------------GFPSGTK 123 (507)
Q Consensus 67 dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~----------~~~-------------~~~~~~~ 123 (507)
||||++|+++...+ .+.++||++|++|+|||||+|+|++..... .++ .......
T Consensus 1 ~gkI~~i~~~~~~~---~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~~~~~p~~~~~d~~~~~~~~~~ 77 (359)
T cd01309 1 DGKIVAVGAEITTP---ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETDPVTPHVRAIDGINPDDEAFK 77 (359)
T ss_pred CCEEEEEcCCCCCC---CCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccCCCCCceeEeecccCCCCHhHH
Confidence 79999999876544 367999999999999999999999743111 010 1224566
Q ss_pred HHHhCCceEEEeCCCCCCCCCCCHH--------HHHHHHHHHhcCceeeEEEeccccC--------CCc-ccH---HHHH
Q 010547 124 AAAAGGITTLIDMPLNSDPSTISTE--------TLKLKVDAAEKRIYVDVGFWGGLVP--------ENA-YNA---SALE 183 (507)
Q Consensus 124 ~~l~~GvTt~~~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~---~~~~ 183 (507)
.++++|||++...+ ++........ ..... .......+.+. .+... ..+ ... ..++
T Consensus 78 ~a~~~GvT~~~v~p-~~~~~~gg~~~~i~~~~~~~~~~--~~~~~~~~~~a--~g~~~~~~~~~~~~~p~trmg~~~~lr 152 (359)
T cd01309 78 RARAGGVTTVQVLP-GSANLIGGQGVVIKTDGGTIEDM--FIKAPAGLKMA--LGENPKRVYGGKGKEPATRMGVAALLR 152 (359)
T ss_pred HHHhcCceEEEecC-CCCCcccceEEEEECCCCCHHHh--cccCCceeEEe--cCCCCcccccccCCCccchHHHHHHHH
Confidence 78899999998776 2221110000 01111 11122222211 11100 001 000 1111
Q ss_pred HHHHcC---CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCC
Q 010547 184 ALLNAG---VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTR 260 (507)
Q Consensus 184 ~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (507)
+..... ...-..+... ...+...+..++.+++.++.. +++.+|+..
T Consensus 153 ~~~~~a~~y~~~~~~~~~~---~~~~~~~d~~l~~l~~~~~~~-~~v~vHa~~--------------------------- 201 (359)
T cd01309 153 DAFIKAQEYGRKYDLGKNA---KKDPPERDLKLEALLPVLKGE-IPVRIHAHR--------------------------- 201 (359)
T ss_pred HHHHHHHHHHHHhhhhhhc---ccCCCCCCccHHHHHHHHcCC-eeEEEEeCC---------------------------
Confidence 111000 0000000000 001112334456666655544 889999843
Q ss_pred ChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeE
Q 010547 261 PPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKC 340 (507)
Q Consensus 261 p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (507)
...+..++++.++. +.++.+.|+... .+.++.+++.|+.+.. +|....... .
T Consensus 202 -----~~~i~~~l~~~~e~-------g~~~~i~H~~~~---~~~~~~la~~gv~v~~--~P~~~~~~~--~--------- 253 (359)
T cd01309 202 -----ADDILTAIRIAKEF-------GIKITIEHGAEG---YKLADELAKHGIPVIY--GPTLTLPKK--V--------- 253 (359)
T ss_pred -----HHHHHHHHHHHHHc-------CCCEEEECchhH---HHHHHHHHHcCCCEEE--Ccccccccc--H---------
Confidence 22356777777765 667888898763 5566777778877654 443211000 0
Q ss_pred cCCCCChhhHHHHHHHHhcC-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHH
Q 010547 341 APPIRDAANKEKLWEALMDG-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWW 419 (507)
Q Consensus 341 ~p~~~~~~~~~~~~~~l~~G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~ 419 (507)
. . .......+.+++.+| +.++++||+....... +......+...+++.+++++++
T Consensus 254 ~-~--~~~~~~~~~~l~~aGGv~valgsD~~~~~~~~---------------------l~~~~~~a~~~gl~~~~al~~~ 309 (359)
T cd01309 254 E-E--VNDAIDTNAYLLKKGGVAFAISSDHPVLNIRN---------------------LNLEAAKAVKYGLSYEEALKAI 309 (359)
T ss_pred H-H--hhcchhhHHHHHHcCCceEEEECCCCCccchh---------------------HHHHHHHHHHcCCCHHHHHHHH
Confidence 0 0 011223456777887 9999999985322110 2222334556789999999999
Q ss_pred hhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEE
Q 010547 420 SERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVY 490 (507)
Q Consensus 420 T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~ 490 (507)
|.|||++||+ +++|+|++|+.||||+||.++... ..+|..||++|++||
T Consensus 310 T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~~----------------------~~~v~~v~i~G~~v~ 359 (359)
T cd01309 310 TINPAKILGIEDRVGSLEPGKDADLVVWNGDPLEP----------------------TSKPEQVYIDGRLVY 359 (359)
T ss_pred HHHHHHHhCCCCCcccCCCCCccCEEEECCCcccc----------------------cCcccEEEECCEEeC
Confidence 9999999999 667999999999999999763211 127999999999986
No 103
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.94 E-value=5.9e-25 Score=203.19 Aligned_cols=347 Identities=23% Similarity=0.348 Sum_probs=232.4
Q ss_pred CCcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCC-------CCCcEEecCCCEEecceeecccccCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNS-------KTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~-------~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
....+++|.|+.|+|-.++.++||-|+||||..||+...+.-.. ..+++|.++|++++.|-||+|+|+..+
T Consensus 64 ~~~~D~VITNa~IiD~~Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~P-- 141 (568)
T COG0804 64 AGALDLVITNALIIDYWGIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFICP-- 141 (568)
T ss_pred cCcccEEEeeeEEEeccceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEecH--
Confidence 33568999999999999999999999999999999877654322 357889999999999999999998864
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCC--------HHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIS--------TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEA 184 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (507)
+....++..|+||.... ++.|...+ .-.+.+.+++++ ..++++.+.+ ..+......+.+
T Consensus 142 -------qqi~~Al~sGiTtmiGG--GtGpa~Gt~aTT~TpG~w~i~rMl~a~d-~~p~N~g~lg---KGn~s~~~~L~E 208 (568)
T COG0804 142 -------QQIEEALASGITTMIGG--GTGPADGTNATTCTPGPWHIARMLQAAD-GLPMNIGFLG---KGNASNPAPLAE 208 (568)
T ss_pred -------HHHHHHHhcCcEEEecC--ccCCCCCcccccccCCHHHHHHHHHhhh-cCceeeEEee---cCCCCCchhHHH
Confidence 44688999999999976 33443221 334555555544 4567777643 444455667889
Q ss_pred HHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhH
Q 010547 185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 264 (507)
Q Consensus 185 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 264 (507)
..++|+.++|. ++.+..++..+...+..|.+++++|.+|.....
T Consensus 209 qi~aGa~GlKl-------HEDWG~TpaaI~~~L~VAD~~DvqVaiHtDTLN----------------------------- 252 (568)
T COG0804 209 QIEAGAIGLKL-------HEDWGATPAAIDTCLSVADEYDVQVAIHTDTLN----------------------------- 252 (568)
T ss_pred HHhhccceeEe-------ecccCCCHHHHHHHHhhhhhhceEEEEeecccc-----------------------------
Confidence 99999999999 666788999999999999999999999986543
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCC----CCce
Q 010547 265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRF 338 (507)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~----~~~~ 338 (507)
|...++..+..++ |..+|..|...+. -..+.++.+...++..+ .+.| .+.++.+.+... -...
T Consensus 253 EsGfvEdTi~A~~---------gRtIHtyHtEGAGGGHAPDiikv~~~~NvLPs-STNP-T~PytvNT~~EhlDMlMVcH 321 (568)
T COG0804 253 ESGFVEDTIAAIK---------GRTIHTYHTEGAGGGHAPDIIKVAGQPNVLPS-STNP-TRPYTVNTIDEHLDMLMVCH 321 (568)
T ss_pred cccchHhHHHHhc---------CceeEEeeccCCCCCCccHHHHHccCCCcCcC-CCCC-CCCcccccHHHhhhhhhhhc
Confidence 2334567777776 8889999987430 12345555444333221 1112 222333333221 1222
Q ss_pred eEcCCCCC------h-hhHHHH--HHHHh-cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh-
Q 010547 339 KCAPPIRD------A-ANKEKL--WEALM-DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK- 407 (507)
Q Consensus 339 ~~~p~~~~------~-~~~~~~--~~~l~-~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~- 407 (507)
..+|.+.. . -..+.+ -..|. .|....++||..+- ..+.......|..+.+
T Consensus 322 hL~p~ipeDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAM-------------------GRvGEvi~RtwQtA~km 382 (568)
T COG0804 322 HLDPRIPEDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAM-------------------GRVGEVITRTWQTADKM 382 (568)
T ss_pred cCCCCCcchhhhhhhccchhhhhHHHHHhhccceEEeccchHhh-------------------hccchhhhhHHHHHHHH
Confidence 22333211 0 011111 12222 38888999996532 1112222223333221
Q ss_pred ---cC-----------CCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccC
Q 010547 408 ---YG-----------VTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLG 472 (507)
Q Consensus 408 ---~g-----------ls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (507)
.| +....-+...|.|||..-|+ +.+||+|+||.||||+|++ .|+..
T Consensus 383 K~qrG~L~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~P-----------aFFGv-------- 443 (568)
T COG0804 383 KKQRGALPEDAGGNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDP-----------AFFGV-------- 443 (568)
T ss_pred HHhcCCCCCCCCCCccHHHhhhhhheecCHHHhcccchhccceeccceeeeeeech-----------hhcCC--------
Confidence 11 45667888999999999999 8899999999999999994 23322
Q ss_pred cEEeeEEEEEEECCEEEEe
Q 010547 473 RRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 473 ~~~~~~V~~v~v~G~~v~~ 491 (507)
++..|+.+|-+.+.
T Consensus 444 -----KP~~vlkgG~ia~a 457 (568)
T COG0804 444 -----KPELVLKGGMIAWA 457 (568)
T ss_pred -----CcceEEecceeeee
Confidence 36788888887764
No 104
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.94 E-value=3e-24 Score=191.77 Aligned_cols=315 Identities=22% Similarity=0.264 Sum_probs=199.4
Q ss_pred CcceEEEEecEEECCCCc--eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCCh
Q 010547 41 PYNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF 118 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~--~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 118 (507)
++.+++++|++++++..- ...+|.|.||||++++ ..+.+. +.++||+.|.+|.||+||.|+|.+.++....
T Consensus 2 mqfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~-d~~apa---~tq~Ida~Gc~VspG~iDlHvHvy~ggt~~~--- 74 (386)
T COG3964 2 MQFDILLTGGRLIDPARGIDEITNIAIINGKIAAAD-DYPAPA---ETQIIDADGCIVSPGLIDLHVHVYYGGTEGG--- 74 (386)
T ss_pred CccceeeeCCeecccccccCccceeeeecCeEEecc-CcCCCh---hheEEccCccEeccCeeeeeeEEecCCCccC---
Confidence 467899999999998653 3578999999999999 444442 6899999999999999999999988654322
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh---cCceeeEEEeccccCCCc------ccHHHHHHHHHc-
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIYVDVGFWGGLVPENA------YNASALEALLNA- 188 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~- 188 (507)
....+.+..+||||++|.+ + ........+++...... .+..++++..+ +..+++ -....+.+..+.
T Consensus 75 v~pd~~ga~~GvTTvVDAG-S--aGaanf~gF~r~vie~Sr~RI~Aflnvs~~G-l~a~nE~~d~~nid~d~i~aa~reh 150 (386)
T COG3964 75 VRPDMYGAPNGVTTVVDAG-S--AGAANFDGFYRTVIEASRVRIKAFLNVSPPG-LTASNELYDPDNIDEDKIHAAFREH 150 (386)
T ss_pred cCHHHccccCCceEEEecC-C--cCccchhhHHHHhhcchhheeeeeeeccCcc-eeeehhhCChhhCCHHHHHHHHHhC
Confidence 1234556789999999996 2 22233444444433222 22334433322 222211 122334444332
Q ss_pred --CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 189 --GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 189 --g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
-..|+|.-....... ...-.-+...++.|+..+.|+++|..++.. .
T Consensus 151 ~d~ivGlKvR~s~~~~g---~~GitPl~la~~ia~~~klPlmvHigePp~---------------------------~-- 198 (386)
T COG3964 151 RDVIVGLKVRVSTEDIG---EYGITPLTLALRIANDLKLPLMVHIGEPPV---------------------------L-- 198 (386)
T ss_pred cCcEEEEEEEeeecccc---ccCCchHHHHHHHHhhcCCceEEecCCCCc---------------------------c--
Confidence 245666533221111 112233566777788999999999854322 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCCh---------hHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCc
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA---------SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 337 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~---------~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (507)
..+.++.+.. | -.+.||... ......++.++++|+.+...+... .
T Consensus 199 --~dEvlerL~~--------G--DIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~a--------------s 252 (386)
T COG3964 199 --MDEVLERLRR--------G--DIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGRA--------------S 252 (386)
T ss_pred --HHHHHHhccC--------C--ceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCcc--------------e
Confidence 1334444332 2 234555321 145667888888887655433221 1
Q ss_pred eeEcCCCCChhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHH
Q 010547 338 FKCAPPIRDAANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLA 416 (507)
Q Consensus 338 ~~~~p~~~~~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al 416 (507)
+ ......+++.+|. ++.++||-.....- .+=-..+..++.+....|+++.+++
T Consensus 253 f----------sf~vAr~aia~GllP~~ISSDlh~~~~~----------------n~Pv~dla~~mSKllalgmpl~~Vi 306 (386)
T COG3964 253 F----------SFNVARRAIANGLLPDIISSDLHTITKL----------------NGPVYDLAWIMSKLLALGMPLTDVI 306 (386)
T ss_pred e----------eHHHHHHHHhcCCCcceeeccceeeeec----------------CchHHHHHHHHHHHHHcCCcHHHHH
Confidence 1 1224467788886 48899996544310 1111124555666677899999999
Q ss_pred HHHhhchhHHhCCCCCCccccCCCCcEEEEcCCC
Q 010547 417 SWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEA 450 (507)
Q Consensus 417 ~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~ 450 (507)
+++|.|||.+++++.+|+|++|..||+++|+..+
T Consensus 307 ~avT~npA~~i~l~~~gtLa~G~~aD~tvf~lk~ 340 (386)
T COG3964 307 NAVTHNPAVLIGLAEIGTLAPGAFADITVFKLKN 340 (386)
T ss_pred HHHhcCHHHHhCccccCccCCCcccceEEEEecc
Confidence 9999999999999889999999999999999765
No 105
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.93 E-value=4.3e-24 Score=220.13 Aligned_cols=191 Identities=18% Similarity=0.181 Sum_probs=114.5
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCC
Q 010547 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283 (507)
Q Consensus 204 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 283 (507)
+.+..+++++.++++.|++.|.++.+|+.+... +...++...+.....
T Consensus 288 g~~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~--------------------------------i~~~l~~~~~~~~~~ 335 (479)
T cd01300 288 GLLLISPEELEELVRAADEAGLQVAIHAIGDRA--------------------------------VDTVLDALEAALKDN 335 (479)
T ss_pred CCccCCHHHHHHHHHHHHHCCCCEEEEEecHHH--------------------------------HHHHHHHHHHHHHhc
Confidence 345678999999999999999999999954321 222222222211111
Q ss_pred CCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCee
Q 010547 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (507)
Q Consensus 284 ~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 363 (507)
+..+.+..+.|+... ..+.++.+++.|+.+ .+||++.....+..... ...+. ......++..+++.|+.+
T Consensus 336 g~~~~r~~i~H~~~~--~~~~~~~l~~~gv~~--~~~P~~~~~~~~~~~~~----~lg~~--~~~~~~p~~~~~~~Gv~v 405 (479)
T cd01300 336 PRADHRHRIEHAQLV--SPDDIPRFAKLGVIA--SVQPNHLYSDGDAAEDR----RLGEE--RAKRSYPFRSLLDAGVPV 405 (479)
T ss_pred CCCCCCceeeecccC--CHHHHHHHHHcCCce--EeCcccccCchHHHHHh----cccHH--HHhcCchHHHHHHCCCee
Confidence 112456889998873 356788888888655 44776654432211100 00000 011223567788899999
Q ss_pred EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCc
Q 010547 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHAD 442 (507)
Q Consensus 364 ~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~AD 442 (507)
++|||+.+..... |......+......... ....+.++|++++++++|.|||+++|+ +++|+|++||.||
T Consensus 406 ~lGSD~~~~~~~p-------~~~~~~av~~~~~~~~~--~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~AD 476 (479)
T cd01300 406 ALGSDAPVAPPDP-------LLGIWAAVTRKTPGGGV--LGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLAD 476 (479)
T ss_pred eccCCCCCCCCCH-------HHHHHHHheeeCCCCCC--CCCccccCCHHHHHHHHHHHHHHHhccccccccccCCcccc
Confidence 9999986442110 10000000000000000 000234689999999999999999999 7789999999999
Q ss_pred EEE
Q 010547 443 LVV 445 (507)
Q Consensus 443 lvv 445 (507)
|||
T Consensus 477 lvv 479 (479)
T cd01300 477 FVV 479 (479)
T ss_pred eeC
Confidence 986
No 106
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.92 E-value=1.3e-22 Score=204.75 Aligned_cols=282 Identities=21% Similarity=0.227 Sum_probs=184.8
Q ss_pred ecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec
Q 010547 90 DYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169 (507)
Q Consensus 90 D~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (507)
|++|++|+|||||+|+|+..+... .....+.++++||||+++.+ ...+.....+.+....+.. .+..+++....
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~~~~~----~~~~~~~a~~~GvTtvv~~p-~~~~~v~g~~~~~~~~~~a-~~~p~~~~~~~ 74 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIESSMLT----PSEFAKAVLPHGTTTVIADP-HEIANVAGVDGIEFMLEDA-KKTPLDIFWML 74 (422)
T ss_pred CCCCCEEccCEEEccCCcCCCCCC----hHHHHHHHHCCCcEEEEeCC-CCCCcCCCHHHHHHHHHHH-hCCCceEEEeC
Confidence 789999999999999999876432 44567889999999999987 6667777788888777754 34455555444
Q ss_pred cccCC--------CcccHHHHHHHHH-cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhh
Q 010547 170 GLVPE--------NAYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH 240 (507)
Q Consensus 170 ~~~~~--------~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 240 (507)
+.... ..-..++++++.+ .++.+++.++.+.. . ...++.+.+.++.+++++.++..|+.....
T Consensus 75 p~~vp~t~~e~~g~~~~~~~i~~l~~~~~vvglgE~md~~~---v-~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~~---- 146 (422)
T cd01295 75 PSCVPATPFETSGAELTAEDIKELLEHPEVVGLGEVMDFPG---V-IEGDDEMLAKIQAAKKAGKPVDGHAPGLSG---- 146 (422)
T ss_pred CCcCCCCCCCCCCCcCCHHHHHHHhcCCCCcEEEEeccCcc---c-cCCcHHHHHHHHHHHhCCCEEEEeCCCCCH----
Confidence 33111 1113677888776 48999998764431 1 346678999999999999999999944220
Q ss_pred hhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecc
Q 010547 241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETC 320 (507)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~ 320 (507)
..+...+. . |.. ..|... ...+..+ ..++|..+.....
T Consensus 147 --------------------------~~L~a~l~----a-------Gi~--~dH~~~--~~eea~e-~l~~G~~i~i~~g 184 (422)
T cd01295 147 --------------------------EELNAYMA----A-------GIS--TDHEAM--TGEEALE-KLRLGMYVMLREG 184 (422)
T ss_pred --------------------------HHHHHHHH----c-------CCC--CCcCCC--cHHHHHH-HHHCCCEEEEECc
Confidence 11222222 1 211 135433 2222333 3367765543211
Q ss_pred cccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHh--cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHH
Q 010547 321 PHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM--DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVL 398 (507)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~--~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 398 (507)
. .......+.+.+. .+..++++||....+.... .-.+
T Consensus 185 ~------------------------~~~~~~~~~~~l~~~~~~~i~l~TD~~~~~~~~~-----------------~g~~ 223 (422)
T cd01295 185 S------------------------IAKNLEALLPAITEKNFRRFMFCTDDVHPDDLLS-----------------EGHL 223 (422)
T ss_pred c------------------------cHhhHHHHHHhhhhccCCeEEEEcCCCCchhhhh-----------------cchH
Confidence 0 0111222333333 4789999999752221100 0013
Q ss_pred HHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeE
Q 010547 399 PVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGK 478 (507)
Q Consensus 399 ~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (507)
....+.+...+++++++++++|.|||+++|++++|+|++|+.|||+++|... .. +
T Consensus 224 ~~v~r~a~~~g~s~~eal~~aT~n~A~~~gl~~~G~i~~G~~AD~vv~~~~~-------------~~------------~ 278 (422)
T cd01295 224 DYIVRRAIEAGIPPEDAIQMATINPAECYGLHDLGAIAPGRIADIVILDDLE-------------NF------------N 278 (422)
T ss_pred HHHHHHHHHcCCCHHHHHHHHhHHHHHHcCCCCCcccCCCCcCCEEEECCCC-------------CC------------c
Confidence 3334455667999999999999999999999668999999999999998321 11 6
Q ss_pred EEEEEECCEEEEecC
Q 010547 479 VLATISRGNLVYKEG 493 (507)
Q Consensus 479 V~~v~v~G~~v~~~g 493 (507)
|..||++|+.||+..
T Consensus 279 v~~v~~~G~~v~~r~ 293 (422)
T cd01295 279 ITTVLAKGIAVVERH 293 (422)
T ss_pred eEEEEECCeEEEEec
Confidence 899999999999653
No 107
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.86 E-value=1.8e-19 Score=172.38 Aligned_cols=264 Identities=22% Similarity=0.268 Sum_probs=168.9
Q ss_pred ecceeecccc-----cCCCCCCCCC---ChhHHHHHHHhCCceEEEeCCCCC-CCCC-CCHHHHHHHHHHHh-----cCc
Q 010547 97 MPGLIDVHAH-----LDDPGRTEWE---GFPSGTKAAAAGGITTLIDMPLNS-DPST-ISTETLKLKVDAAE-----KRI 161 (507)
Q Consensus 97 ~PGfID~H~H-----~~~~~~~~~~---~~~~~~~~~l~~GvTt~~~~~~~~-~p~~-~~~~~~~~~~~~~~-----~~~ 161 (507)
+||+||+|+- +...+...|. .+...-+..+.+||||+.+...-. .... ...+......+++. +..
T Consensus 1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
T cd01306 1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL 80 (325)
T ss_pred CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence 6999999993 3332333332 233445678899999999864211 1222 24555555555443 334
Q ss_pred eeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCC-C-------------C-------------------CC
Q 010547 162 YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-F-------------P-------------------MT 208 (507)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-------------~-------------------~~ 208 (507)
.++...+.......+...+.+..+.+.+...+-.++.+...-+ . . ..
T Consensus 81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v~lvs~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (325)
T cd01306 81 RADHRLHLRCELADPAVLPELESLMADPRVHLVSLMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARAAAY 160 (325)
T ss_pred hhhcceEEEEeecCccHHHHHHHHhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhc
Confidence 5667777777777788888899998887777777765532211 0 0 12
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCc
Q 010547 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~ 288 (507)
+.+.++++++.|+++|+++.+|+.... +.+....+. |.
T Consensus 161 ~~~~~~~iv~~A~~~gl~vasH~d~~~-------------------------------~~v~~a~~~-----------Gv 198 (325)
T cd01306 161 APANRSELAALARARGIPLASHDDDTP-------------------------------EHVAEAHEL-----------GV 198 (325)
T ss_pred CHHHHHHHHHHHHHCCCcEEEecCCCh-------------------------------HHHHHHHHC-----------CC
Confidence 246678888888888888888884321 011222221 22
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCC
Q 010547 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSD 368 (507)
Q Consensus 289 ~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD 368 (507)
.+ ..|. ...+.++.+++.|+.+.... |. .+.. + .......+.++++.|+.++++||
T Consensus 199 ~~-~E~p----~t~e~a~~a~~~G~~vv~ga-pn-------~lrg-~----------s~~g~~~~~~ll~~Gv~~al~SD 254 (325)
T cd01306 199 VI-SEFP----TTLEAAKAARELGLQTLMGA-PN-------VVRG-G----------SHSGNVSARELAAHGLLDILSSD 254 (325)
T ss_pred ee-ccCC----CCHHHHHHHHHCCCEEEecC-cc-------cccC-c----------cccccHhHHHHHHCCCeEEEEcC
Confidence 22 1222 44556667777787665421 11 0000 0 11123456788899999999999
Q ss_pred CCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcC
Q 010547 369 HSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEP 448 (507)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~ 448 (507)
+.+... +...+......+++++++++++|.|||+++|++++|+|++|+.||||++|.
T Consensus 255 ~~p~sl-----------------------l~~~~~la~~~gl~l~eAl~~aT~nPA~~lGl~d~G~I~~G~~ADlvvvd~ 311 (325)
T cd01306 255 YVPASL-----------------------LHAAFRLADLGGWSLPEAVALVSANPARAVGLTDRGSIAPGKRADLILVDD 311 (325)
T ss_pred CCcHhH-----------------------HHHHHHHHHHcCCCHHHHHHHHhHHHHHHcCCCCCCCcCCCCCCCEEEEeC
Confidence 875421 333455566788999999999999999999996689999999999999997
Q ss_pred C
Q 010547 449 E 449 (507)
Q Consensus 449 ~ 449 (507)
+
T Consensus 312 ~ 312 (325)
T cd01306 312 M 312 (325)
T ss_pred C
Confidence 5
No 108
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.81 E-value=1.3e-17 Score=155.04 Aligned_cols=82 Identities=27% Similarity=0.387 Sum_probs=63.5
Q ss_pred CCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe-eEEEEEEECCE
Q 010547 410 VTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS-GKVLATISRGN 487 (507)
Q Consensus 410 ls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~V~~v~v~G~ 487 (507)
+++.|+..+.-.+||+.||+ +++|.|.+|.+||+.|+|.++...=+.. -|+.+..+ ..-..|+.+|+
T Consensus 438 ~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~-----------dye~v~kaf~~A~ytlK~Ge 506 (575)
T COG1229 438 LTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSN-----------DYEKVEKAFRKAAYTLKGGE 506 (575)
T ss_pred ccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcc-----------cHHHHHHHHhheeEEecCce
Confidence 88999999999999999999 7799999999999999998763221111 11111100 24678999999
Q ss_pred EEEecCcccCCCCCc
Q 010547 488 LVYKEGNHAPAACGS 502 (507)
Q Consensus 488 ~v~~~g~~~~~~~~~ 502 (507)
+|+++|+++....||
T Consensus 507 IvvkdGeiv~~p~gr 521 (575)
T COG1229 507 IVVKDGEIVAEPEGR 521 (575)
T ss_pred EEEecceEEecccCc
Confidence 999999999877776
No 109
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.81 E-value=9.7e-19 Score=169.42 Aligned_cols=293 Identities=26% Similarity=0.310 Sum_probs=156.6
Q ss_pred ecCCCEEecceeecccc--cCCC--CCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeE
Q 010547 90 DYGEAVIMPGLIDVHAH--LDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165 (507)
Q Consensus 90 D~~g~~v~PGfID~H~H--~~~~--~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 165 (507)
|++|++|+|||||+|+| +... .....+........++.+|+|++++.+ . ............ ....
T Consensus 1 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~-~-----~~~~~~~~~~~~-----~~~~ 69 (304)
T PF13147_consen 1 DASGKYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMP-G-----TNPEELNRARRR-----GAGY 69 (304)
T ss_dssp E-TTSEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESS-S-----SSHHHHHHHHHH-----ESEE
T ss_pred CCCCCEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCC-C-----CCchhhHHHHhh-----cccc
Confidence 89999999999999999 2211 112223345667888999999999754 1 223333332222 1111
Q ss_pred EEeccccCCCcc---cHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcC-CcEEEecCCcccchhhh
Q 010547 166 GFWGGLVPENAY---NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK-RPLLVHAEMEKGSERHV 241 (507)
Q Consensus 166 ~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~ 241 (507)
.... ...... ....+.........++.. . ......+.+.+..+.+...+ ..+..|+... ......
T Consensus 70 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 138 (304)
T PF13147_consen 70 PGSG--AGPRGTTIEELEALVDLIAAEGVGFVA--A------YNGIEGPGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAI 138 (304)
T ss_dssp EEEC--ESCCHHHHHHHHHHHHHHHHTEEEEES--S------STHHHHHHHHHHHHHHHHHTHEEEEEECHHH-HHHHHH
T ss_pred cccc--ccccccchHHHHHHHHHHhhcCcceee--c------cccCCHHHHHHHHHHHHhcCCeeeecccchh-hHHHHH
Confidence 1111 111111 222333333333333322 0 11345567778888888888 4444444322 111111
Q ss_pred hcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccc
Q 010547 242 KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP 321 (507)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~ 321 (507)
.... ... .. . ..+.......+........ +..++....... .....+......++......
T Consensus 139 ~~~~-~~~----~~-~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 199 (304)
T PF13147_consen 139 AEGL-DAM----EH-I-LPHEVAEALHLAEALAQGA---------GPGLHCHVASDD-ATAEGVAIAHGFGLPPTPLH-- 199 (304)
T ss_dssp HHHH-HTT----HH-S-THHHHHHHHHHHHHHHHHH---------THCEEEEETSSH-HHHHHHHHHHHTTHEEEEEE--
T ss_pred Hhcc-cch----hh-h-hhhhHHHHHHHHHHhhhcc---------ccchhhhhhhhh-hhhHHHHHHHhhccccchHH--
Confidence 0000 000 00 0 0011111112222222222 334444444443 33222444445554433321
Q ss_pred ccccccccCCCCCCCceeEcCCCC--ChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHH
Q 010547 322 HYLAFSAEEIPDGDTRFKCAPPIR--DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLP 399 (507)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 399 (507)
.+ ..........+...|+++ .......+.+++++|++++++||+.+.... +....+.
T Consensus 200 -~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~-----------------~~~~~~~ 258 (304)
T PF13147_consen 200 -LL---ARDAAAAGIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSSTE-----------------GSGDLLH 258 (304)
T ss_dssp -HH---HHHHHHHGGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTTTT-----------------CTTTHHH
T ss_pred -hh---HHHHHhcCceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccccc-----------------cccccch
Confidence 00 000111155677888877 778888899999999999999998865321 1122255
Q ss_pred HHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEE
Q 010547 400 VTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLV 444 (507)
Q Consensus 400 ~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlv 444 (507)
.....+...|+++++|++++|.|||++||+ +++|+|++||+||||
T Consensus 259 ~~~~~~~~~gl~~~~al~~~T~~pA~~lgl~~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 259 EAMRLAVRAGLSPEEALRAATSNPARILGLDDDKGSIAPGKDADLV 304 (304)
T ss_dssp HHHHHHHHTSSTHHHHHHHHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence 556667779999999999999999999999 899999999999997
No 110
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.78 E-value=6.6e-18 Score=148.87 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=73.7
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC-----
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW----- 115 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~----- 115 (507)
...-+.|.|++|+-..++...++||+||||..-.+---.+.- ..+..|||.|+++.|||||...+.+.+...+.
T Consensus 10 ~~~llQFtNCrilR~g~l~~edlWVR~GRIldpe~vFFeErt-~Ad~riDCgG~IlaPGfIDlQiNGGfGvDFS~dte~~ 88 (407)
T KOG3892|consen 10 GNRLLQFTNCRILRGGKLLREDLWVRGGRILDPEKVFFEERT-VADERIDCGGRILAPGFIDLQINGGFGVDFSQDTEDV 88 (407)
T ss_pred ccceeeeeeeEEeeCCceeehheeEeCCeecCcccccceecc-chhheeccCCeeecCceEEEEecCccccccccchhhh
Confidence 345578999999998889999999999999876654322211 25678999999999999999999988743322
Q ss_pred -CChhHHHHHHHhCCceEEEeCC
Q 010547 116 -EGFPSGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 116 -~~~~~~~~~~l~~GvTt~~~~~ 137 (507)
+.+...++..+++|+|.+...+
T Consensus 89 ~eGvAlVAr~ll~hGvtsf~Pt~ 111 (407)
T KOG3892|consen 89 GEGVALVARQLLSHGVTSFCPTL 111 (407)
T ss_pred hhhHHHHHHHHHhcCCCcCCCcc
Confidence 2234457888999999998654
No 111
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.74 E-value=3e-18 Score=168.88 Aligned_cols=293 Identities=23% Similarity=0.255 Sum_probs=142.3
Q ss_pred EEecceeecccccCCCCCC-------CCCChhHHHHHHHhCCceEEEeCCCCCCCCCC--CHHHHHHHHHHHhcCceeeE
Q 010547 95 VIMPGLIDVHAHLDDPGRT-------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTI--STETLKLKVDAAEKRIYVDV 165 (507)
Q Consensus 95 ~v~PGfID~H~H~~~~~~~-------~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~ 165 (507)
+|+|||||+|+|+..+... ..+.+....+.++++||||+++++ .+.+... .............. .....
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGLLDPEDHYESIRTGAKAALKGGVTTVLDTP-HTSPNPDIELRNEIMEGLAAAPK-IEPAM 78 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEE-ESSHCHHHHHHHHHHHHHHHHHH-HEEEE
T ss_pred CEEcChhHHhhCcCCcCccccCCHHHHHHHHHHHHHHHHhcCeEEEEcCc-ccCCccccccccccccccccchh-hhccc
Confidence 6899999999999988666 344566778899999999999985 2333322 01111121221111 11111
Q ss_pred EEe----ccc----cCCCcc---c-------HHHHHHHHHcCCc--EEEEcccCCCCCCCCCCCHHHHHHHHHHHHh---
Q 010547 166 GFW----GGL----VPENAY---N-------ASALEALLNAGVL--GLKSFMCPSGINDFPMTNASHIKEGLSVLAR--- 222 (507)
Q Consensus 166 ~~~----~~~----~~~~~~---~-------~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~--- 222 (507)
..+ .+. ...... . .+.++.....+.. .+...............+.+.+...++.+++
T Consensus 79 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 158 (333)
T PF01979_consen 79 TLLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYTVSDEELREAVELAKEFLA 158 (333)
T ss_dssp EEEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccccchhhhhhhHHhhhhhHHH
Confidence 111 000 000000 0 1112222222211 1111110001123346788889999999988
Q ss_pred --c-CCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh
Q 010547 223 --Y-KRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS 299 (507)
Q Consensus 223 --~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~ 299 (507)
. +.++.+|..+.......+ ..+. .....+.+....-+ .... .+....+.|+...+
T Consensus 159 ~~~~~~~~~~h~~~~~~~~~~~-------------~~~~---~~~~~~~~~~~~~~-~~~~-----~~~~~~~~h~~~~~ 216 (333)
T PF01979_consen 159 AEKLGIPVHIHVAEGTGEVEAM-------------THLY---GMSPIEALDHLGLL-EEAI-----DDGVDLIAHGTHLS 216 (333)
T ss_dssp HHHHTHEEEEEESSSHHHHCCC-------------HHHH---SHHHHHHHHHHHSC-HHHH-----HHHCEEEEEHTTSE
T ss_pred HHhhcccceeeeccCcccceeE-------------eeee---eccchhhhccchhh-hhhc-----ccccceeeccccCC
Confidence 3 999999986644310000 0000 00111111111100 0000 02335566766531
Q ss_pred HHHHHHHHHHhCCCCEEEecccccccc---cccCCCCCCCceeEcCCCCChhhHHHHHHHHhc-CCeeEEeCCCCCCChh
Q 010547 300 SSLDLLMEAKTNGDSITVETCPHYLAF---SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD-GHIDMLSSDHSPTVPE 375 (507)
Q Consensus 300 ~~~~~i~~~~~~g~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~-G~~~~lgtD~~~~~~~ 375 (507)
.+.++.+++.+..+.. ||..... .............. ..........+.+.+.+ |+. +|||+.. .
T Consensus 217 --~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~g~~--lgtDg~~---~ 285 (333)
T PF01979_consen 217 --DEEIELLKETGIGIIH--CPISNDSAPHKPGKAIMMDGTAEG--IYGLGSGGAPLFRMLDKMGVN--LGTDGVA---E 285 (333)
T ss_dssp --HHHHHHHHHHTHEEEE--EHHHHHHHHHHTTHHSETTBSBTS--BSCTTHHHHHHHHHHHCTTHE--ETTCTTC---H
T ss_pred --HHHhhhhhccCCcccc--ccchhhhhccccccccccchhccc--cccccccccchhhhhhhcccc--ccccccc---c
Confidence 2234444444544432 2211111 00000000000000 00122334455666666 777 9999432 1
Q ss_pred hhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEc
Q 010547 376 LKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWE 447 (507)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld 447 (507)
.++...+.+++++++++++|.|||++||+ +++|+|++||+|||||||
T Consensus 286 -------------------------~l~~~~~~~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 286 -------------------------ELKLFVRLGISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp -------------------------HHHHHHHHHSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred -------------------------cccccccccccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 12233344499999999999999999999 888999999999999997
No 112
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.65 E-value=5.1e-15 Score=149.85 Aligned_cols=246 Identities=22% Similarity=0.219 Sum_probs=130.8
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEec------cccCCCcccHHH-HHH--HHH-cCCc
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWG------GLVPENAYNASA-LEA--LLN-AGVL 191 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~-~~~--~~~-~g~~ 191 (507)
..+.+.|+|++.+.. .......+.+..+.+.... ...+++..+. -+..+....... +.. ..+ .|.
T Consensus 137 ~~~~a~GiTt~~d~~---~~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~- 212 (404)
T PF07969_consen 137 MAAGAYGITTVLDYG---GGFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGA- 212 (404)
T ss_dssp HHHCHTCEEEETTCE---CCCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTS-
T ss_pred HHhcCCCeEEecCCc---cccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeeccccccccchhhhccccccCcccc-
Confidence 345689999999774 1223344555555444443 3233333221 122332222222 222 112 222
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHH
Q 010547 192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271 (507)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 271 (507)
.... .+.+..+++.+.++++.+.+.|.++.+|+.. ..++..
T Consensus 213 ~~~~-------~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~g--------------------------------d~a~~~ 253 (404)
T PF07969_consen 213 PVHI-------SGLPSFDPEELEELVRAAREAGLQVAVHAIG--------------------------------DRAIDE 253 (404)
T ss_dssp EEEE-------TC--SSSHHHHHHHHHHHHHCT-EEEEEEES--------------------------------HHHHHH
T ss_pred cccc-------cccccccchhHHHHHHHHHhcCCeeEEEEcC--------------------------------CchHHh
Confidence 2222 4456778888999999999999999999932 334556
Q ss_pred HHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHH
Q 010547 272 LLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKE 351 (507)
Q Consensus 272 ~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 351 (507)
.++...+. .....+.|+.. ...+.++.+++.++.... .|+++........ ....... ......
T Consensus 254 ~l~a~~~~-------~~~~~i~h~~~--~~~~~~~~~~~l~~~~~~--~p~~~~~~~~~~~--~~~~~~~----~~~~~~ 316 (404)
T PF07969_consen 254 ALDAIEAA-------RARGRIEHAEL--IDPDDIERMAELGVTASV--QPHFLFSWGGEWY--EERLGPE----RARRIY 316 (404)
T ss_dssp HHHHHHHH-------TCCHEEEEHCB--CCHHHHHHHHHHTTEEEE--CCTHHHHETEETH--HHHHHHH----CGGGBT
T ss_pred HHHHHHhh-------cccceeecccc--CCHHHHHHHHHhCCcccc--ChhHhhhccchhh--hhhhhhH----HHHHHh
Confidence 66666654 22125666654 344456666666665443 4433322210000 0000000 011124
Q ss_pred HHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHH---------hcCCCHHHHHHHHhh
Q 010547 352 KLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGR---------KYGVTLEQLASWWSE 421 (507)
Q Consensus 352 ~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~---------~~gls~~~al~~~T~ 421 (507)
++..++++|+.++++||+....... +......... ... ...+|++||++++|.
T Consensus 317 ~~~~~~~~Gv~v~~gsD~p~~~~~P-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~ 379 (404)
T PF07969_consen 317 PIRSLLDAGVRVALGSDAPVSPPNP-----------------FRGIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTS 379 (404)
T ss_dssp HHHHHHHCTTEEEE--TTTTSSCCH-----------------HHHHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTH
T ss_pred HHHHHHhccCceecCcCCcccccCc-----------------chhhhhhhccccccccccccccccccCCHHHHHHHHhH
Confidence 5678899999999999976422111 0000111111 111 267999999999999
Q ss_pred chhHHhCC-CCCCccccCCCCcEEE
Q 010547 422 RPAKLAGQ-VSKGAIAIGNHADLVV 445 (507)
Q Consensus 422 n~A~~lgl-~~~G~I~~G~~ADlvv 445 (507)
|||+++|+ +++|+|++||.|||||
T Consensus 380 ~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 380 NPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp HHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred HHHHHcCCCCCcceECCCCCcCeEC
Confidence 99999999 5559999999999997
No 113
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.60 E-value=3.6e-15 Score=109.16 Aligned_cols=68 Identities=35% Similarity=0.658 Sum_probs=49.3
Q ss_pred EEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEE
Q 010547 63 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTL 133 (507)
Q Consensus 63 I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~ 133 (507)
|+|+||||++|++....+. ++.++||++|++|+|||||+|+|+....... .........++++||||+
T Consensus 1 V~I~~g~I~~v~~~~~~~~--~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~-~~~~~~~~~~l~~GvTTV 68 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELPA--DAAEVIDAKGKYVMPGFIDMHTHLGEPGWQS-LDPETEAAAALAGGVTTV 68 (68)
T ss_dssp EEEETTEEEEEESSCCTTS--TCCEEEEETTCEEEE-EEEEEE-TTTTCEGG-CTCHHHHHHHHHTTEEEE
T ss_pred CEEECCEEEEeCCCCCCCC--CCCEEEECCCCEEeCCeEeeeeccccccccc-cchhhHHHHHHCcceeeC
Confidence 7899999999965544432 3567899999999999999999988322211 112456677789999996
No 114
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.53 E-value=4e-13 Score=128.14 Aligned_cols=246 Identities=25% Similarity=0.290 Sum_probs=141.1
Q ss_pred eeecccccCCCCCCC------------------CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 010547 100 LIDVHAHLDDPGRTE------------------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI 161 (507)
Q Consensus 100 fID~H~H~~~~~~~~------------------~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 161 (507)
|||+|+|+....... ..........++++||||++++. ...+.....+......+.+....
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMG-STPPPTTTKAAIEAVAEAARASA 79 (275)
T ss_pred CcccchhhHHHHHccCCCccccccccccCHHHHHHHHHHHHHHHHhcCceEEEeeE-eecCccccchHHHHHHHHHHHhc
Confidence 799999997643221 11244556788999999999986 33333322234444444443321
Q ss_pred eeeEEEeccccCCCc--------ccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 162 YVDVGFWGGLVPENA--------YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 162 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
.+......+...... ...+++.+..+.|+.+++.+..... ...+++.++++++.+++++.++.+|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~~~~~~~~----~~~~~~~~~~~~~~a~~~~~~i~~H~~~ 155 (275)
T cd01292 80 GIRVVLGLGIPGVPAAVDEDAEALLLELLRRGLELGAVGLKLAGPYTA----TGLSDESLRRVLEEARKLGLPVVIHAGE 155 (275)
T ss_pred CeeeEEeccCCCCccccchhHHHHHHHHHHHHHhcCCeeEeeCCCCCC----CCCCcHHHHHHHHHHHHcCCeEEEeeCC
Confidence 233333222322211 1223344444457888887432211 1147899999999999999999999965
Q ss_pred cccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCC
Q 010547 234 EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313 (507)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~ 313 (507)
.... ...+..+++.... +.++.+.|+... ..+.++.+++.|+
T Consensus 156 ~~~~----------------------------~~~~~~~~~~~~~--------~~~~~~~H~~~~--~~~~~~~~~~~g~ 197 (275)
T cd01292 156 LPDP----------------------------TRALEDLVALLRL--------GGRVVIGHVSHL--DPELLELLKEAGV 197 (275)
T ss_pred cccC----------------------------ccCHHHHHHHHhc--------CCCEEEECCccC--CHHHHHHHHHcCC
Confidence 4320 0112344443331 456889999873 3445666666675
Q ss_pred CEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCch
Q 010547 314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393 (507)
Q Consensus 314 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (507)
.+ .+||+...... +.......+.++++.|.++++|||+.+.....+
T Consensus 198 ~~--~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~---------------- 243 (275)
T cd01292 198 SL--EVCPLSNYLLG----------------RDGEGAEALRRLLELGIRVTLGTDGPPHPLGTD---------------- 243 (275)
T ss_pred eE--EECCccccccc----------------CCcCCcccHHHHHHCCCcEEEecCCCCCCCCCC----------------
Confidence 54 44665433221 012223355677888999999999875421110
Q ss_pred hhhHHHHHHHH---HHhcCCCHHHHHHHHhhchhHH
Q 010547 394 LQFVLPVTWSY---GRKYGVTLEQLASWWSERPAKL 426 (507)
Q Consensus 394 ~~~~l~~~~~~---~~~~gls~~~al~~~T~n~A~~ 426 (507)
+...++. ....+++.+++++++|.|||++
T Consensus 244 ----~~~~~~~~~~~~~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 244 ----LLALLRLLLKVLRLGLSLEEALRLATINPARA 275 (275)
T ss_pred ----HHHHHHHHHHHHhcCCCHHHHHHHHhccccCC
Confidence 1112222 2233479999999999999974
No 115
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.49 E-value=6.8e-13 Score=125.73 Aligned_cols=133 Identities=16% Similarity=0.157 Sum_probs=77.5
Q ss_pred HHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEE
Q 010547 213 IKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHI 292 (507)
Q Consensus 213 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~ 292 (507)
++++++.|+++|.++.+|+.+... +. ....++.+.++ +... +
T Consensus 127 l~~~~~~A~~~g~~v~~H~~e~~~----------~~----------------g~~~i~~~~~~-----------~~~~-i 168 (263)
T cd01305 127 LEDILELLRRRGKLFAIHASETRE----------SV----------------GMTDIERALDL-----------EPDL-L 168 (263)
T ss_pred HHHHHHHHHHCCCeeEEecCCCCC----------CC----------------CchhHHHHHhC-----------CCCE-E
Confidence 999999999999999999854321 00 00012333332 1112 4
Q ss_pred EecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC
Q 010547 293 VHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (507)
Q Consensus 293 ~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~ 372 (507)
.|+... +.+.++.+++.|+.+.. ||..-... + ....++.++++.|+++++|||..+.
T Consensus 169 ~H~~~l--~~~~~~~la~~g~~v~~--~P~sn~~l-------~------------~g~~p~~~l~~~Gv~v~lGtD~~~~ 225 (263)
T cd01305 169 VHGTHL--TDEDLELVRENGVPVVL--CPRSNLYF-------G------------VGIPPVAELLKLGIKVLLGTDNVMV 225 (263)
T ss_pred EEcCCC--CHHHHHHHHHcCCcEEE--ChhhHHHh-------C------------CCCCCHHHHHHCCCcEEEECCCCcc
Confidence 566552 23468888888887655 55311000 0 0112356888899999999997543
Q ss_pred ChhhhccccCCccccCCCCchhhhHHHHHHHHHHhc----CCCHHHHHHHHhhchhHH
Q 010547 373 VPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKY----GVTLEQLASWWSERPAKL 426 (507)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----gls~~~al~~~T~n~A~~ 426 (507)
+... . +..+....... .++++++++++|.|+|+.
T Consensus 226 ~~~~----------------~----~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 226 NEPD----------------M----WAEMEFLAKYSRLQGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred CCCC----------------H----HHHHHHHHHHhcccccCCHHHHHHHHhhccccC
Confidence 2111 1 11111111122 459999999999999973
No 116
>PRK06886 hypothetical protein; Validated
Probab=99.49 E-value=1.5e-11 Score=118.36 Aligned_cols=244 Identities=11% Similarity=0.025 Sum_probs=137.8
Q ss_pred HHHHHHhCCceEEEeCCCCCCC--CCCCHHHHHHHHHHHhcCceeeEEEe--ccccCCCcccHHHHHHHHHcCCcEEEEc
Q 010547 121 GTKAAAAGGITTLIDMPLNSDP--STISTETLKLKVDAAEKRIYVDVGFW--GGLVPENAYNASALEALLNAGVLGLKSF 196 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 196 (507)
..+.++++|||.++.+. ...| .....+.+.+..+.......+.+..+ -++. .+...+.+.+..+. +.-+...
T Consensus 74 ~l~~~~~~Gtt~iRtHv-dvd~~~~l~~~~a~~~~r~~~~~~idlq~vafPq~g~~--~~~~~~l~~~al~~-advvGGi 149 (329)
T PRK06886 74 AIELMISQGVTAFGTFV-DIDPICEDRAIIAAHKAREVYKHDIILKFANQTLKGVI--EPTAKKWFDIGSEM-VDMIGGL 149 (329)
T ss_pred HHHHHHHcCcccEeeee-ccCCCccccHHHHHHHHHHHhcCcceEEEEecChhhcc--CccHHHHHHHHHHh-CCEEeCc
Confidence 34566789999999887 4455 34557777777777777766666432 2232 23334555554443 3333332
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHH
Q 010547 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 276 (507)
. +.. ......+.+.+..+++.|+++|.++.+|+.+... + ....++...+..
T Consensus 150 P-~~~-~~~~~~~~e~l~~~~~lA~~~g~~Id~Hlde~~~------------------------~---~~~~le~l~~~~ 200 (329)
T PRK06886 150 P-YRD-ELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNT------------------------P---KEKETEQLCDKT 200 (329)
T ss_pred c-CCc-CCCCCCCHHHHHHHHHHHHHcCCCeEEeECCCCc------------------------h---hHHHHHHHHHHH
Confidence 1 100 1112356789999999999999999999965432 1 111233333333
Q ss_pred HhhccCCCCCCceEEEEecCCh-----hHHHHHHHHHHhCCCCEEEeccccc-ccccccCCCCCCCceeEcCCCCChhhH
Q 010547 277 KDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPHY-LAFSAEEIPDGDTRFKCAPPIRDAANK 350 (507)
Q Consensus 277 ~~~~~~~~~~g~~~~~~h~~~~-----~~~~~~i~~~~~~g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~ 350 (507)
.+.+. ..++.+.|+..- ....+.++.+++.|+.+.. ||.. +.+.. .....| .....
T Consensus 201 ~~~Gl-----~grV~~sH~~~L~~~~~~~~~~~i~~La~agi~Vv~--~P~snl~l~~--------~~~~~p---~~rGv 262 (329)
T PRK06886 201 IEHGM-----QGRVVAIHGISIGAHSKEYRYRLYQKMREADMMVIA--CPMAWIDSNR--------KEDLMP---FHNAL 262 (329)
T ss_pred HHcCC-----CCCEEEEEeccccCcChhhHHHHHHHHHHcCCeEEE--Cchhhhhhcc--------ccccCc---CCCCC
Confidence 33322 236888888642 1344567888888887655 5532 11110 000001 11123
Q ss_pred HHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 351 EKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 351 ~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
.++.++++.|+.+++|||+...... ..+..+.++... ... . ...-.++.++++++|.|||++||+
T Consensus 263 ~pv~eL~~aGV~V~lGtDnv~D~~~-----------p~g~~Dmle~~~-l~~-~-~~~~~~~~~~l~maT~~gAraLgl 327 (329)
T PRK06886 263 TPADEMIPEGITVALGTDNICDYMV-----------PLCEGDMWQELS-LLA-A-GCRFYDLDEMVNIASINGRKVLGL 327 (329)
T ss_pred CCHHHHHHCCCeEEEecCCCcccCC-----------CCCCCCHHHHHH-HHH-H-HcCCCCHHHHHHHHhhhHHHHhCC
Confidence 3567888899999999997632111 111112222111 111 1 112247899999999999999997
No 117
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.41 E-value=5.7e-10 Score=101.15 Aligned_cols=293 Identities=21% Similarity=0.264 Sum_probs=189.5
Q ss_pred EEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEecccc
Q 010547 95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLV 172 (507)
Q Consensus 95 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 172 (507)
+-+..-.|+|.|+.++. +....-...+.++...+-+| +-.|...+.+...++.+.+-. ...-++-....+.
T Consensus 5 l~i~rPdDwHlHLRdg~------mL~~V~p~ts~~f~rAiIMP-NL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlY 77 (344)
T COG0418 5 LTIRRPDDWHLHLRDGA------MLKAVVPYTSRGFGRAIIMP-NLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLY 77 (344)
T ss_pred eeccCccceeEEecCcc------HHHHhhhhhhhhcceEEEcC-CCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEEE
Confidence 34566789999998753 34444445555888888888 667776665544444433321 1111111111222
Q ss_pred CCCcccHHHHHHHHHcC-CcEEEEccc-CCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc
Q 010547 173 PENAYNASALEALLNAG-VLGLKSFMC-PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 250 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~g-~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 250 (507)
-.+....+++++..+.| ..++|.|.. ..........+-+.+...++..++.|+++.+|-|..+..-+.+.
T Consensus 78 Ltd~~~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifd-------- 149 (344)
T COG0418 78 LTDSTTPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFD-------- 149 (344)
T ss_pred ecCCCCHHHHHHHHhcCcEEEEEeccCCccccCcCCcCcHHHHHHHHHHHHHcCCeEEEecccCCccccchh--------
Confidence 23334567888888887 789999841 11111222345778889999999999999999987654211111
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccC
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 330 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~ 330 (507)
.|..-+...++-+.+. .+..++.+.|++++ +..+.++.. +.++...+.+||+.++.++
T Consensus 150 -------------rE~~Fi~~vl~pl~~~-----fP~LKIV~EHiTT~-dav~~v~~~---~~nlaATIT~hHL~~nrnd 207 (344)
T COG0418 150 -------------REAAFIESVLEPLRQR-----FPKLKIVLEHITTK-DAVEYVKDA---NNNLAATITPHHLLLNRND 207 (344)
T ss_pred -------------hHHHHHHHHHHHHHhh-----CCcceEEEEEeccH-HHHHHHHhc---CcceeeEeehhheeeehhh
Confidence 1223355555555554 45889999999998 777777765 4446777789999999999
Q ss_pred CCCCC--CceeEcCCCCChhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh
Q 010547 331 IPDGD--TRFKCAPPIRDAANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK 407 (507)
Q Consensus 331 ~~~~~--~~~~~~p~~~~~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 407 (507)
+..++ ..+.+.|.+....++..+.++...|- ++.+|||.+|+....+...+|. .|+-.....++.+.+...+
T Consensus 208 ~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~~cgc-----AG~fsap~al~~~AevFE~ 282 (344)
T COG0418 208 MLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKESACGC-----AGIFSAPFALPLYAEVFEE 282 (344)
T ss_pred hhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCccccccccccc-----ccccccHhHHHHHHHHHHH
Confidence 88665 66777888899999999988888775 5899999999887766543321 1222222233433333333
Q ss_pred cCCCHHHHHHHHhhchhHHhCCC
Q 010547 408 YGVTLEQLASWWSERPAKLAGQV 430 (507)
Q Consensus 408 ~gls~~~al~~~T~n~A~~lgl~ 430 (507)
.+ .++..=..++.||.+..|++
T Consensus 283 ~n-aL~~LeaF~S~nGp~fY~lp 304 (344)
T COG0418 283 EN-ALDNLEAFASDNGPKFYGLP 304 (344)
T ss_pred hc-HHHHHHHHHhhcCcceeccc
Confidence 33 45555567899999999994
No 118
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.04 E-value=4.3e-08 Score=85.93 Aligned_cols=290 Identities=19% Similarity=0.232 Sum_probs=179.9
Q ss_pred EecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC
Q 010547 96 IMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN 175 (507)
Q Consensus 96 v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (507)
-+|+.-|+|.|+.++.... ...-....+||.....+| +-.|...+.+..-.+.+.+.. ......+...+.-..
T Consensus 6 ~i~~~~DmHvHlR~g~ml~-----aVvP~~a~ggvs~AyvMP-NL~PPiTt~da~i~YkK~i~k-L~skttfLMslYLs~ 78 (344)
T KOG2902|consen 6 TITQPDDMHVHLRDGDMLH-----AVVPHSASGGVSRAYVMP-NLKPPITTTDAAIIYKKFIMK-LPSKTTFLMSLYLSD 78 (344)
T ss_pred ecCCccceeEEeccCCeee-----eeccccccCceeEEEEcC-CCCCCcchHHHHHHHHHHHHh-cCccceeEEEEeecC
Confidence 4688999999998864431 122334568899999998 777877776655555444432 111111122233444
Q ss_pred cccHHHHHHHHHc-CCcEEEEccc---CCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcc
Q 010547 176 AYNASALEALLNA-GVLGLKSFMC---PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (507)
Q Consensus 176 ~~~~~~~~~~~~~-g~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 251 (507)
....+++.+..+. ++.+++.|.. ..+.++. ...-+.++-.++...+.++++.+|-|.+..+...+
T Consensus 79 ~ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV-~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~~V---------- 147 (344)
T KOG2902|consen 79 KTTPEEIREAAESGVIRGVKLYPAGATTNSQDGV-TDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDGHV---------- 147 (344)
T ss_pred CCCHHHHHHHHHhCceeeEEeccCcccccccccc-cccchhhhHHHHHHHHcCceEEecCCCCCccCCce----------
Confidence 5567788887775 6789999841 1111111 11245677788889999999999987644322111
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCC
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI 331 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~ 331 (507)
-..|..-+..++++-.+ .+..++...||++. +.++.++.+. +..+...+.+||+.++.+++
T Consensus 148 ----------f~aE~~Flptll~Lhqr------fP~LKivlEHcTt~-dAv~~ve~a~--~~sVaaTvTahHL~Lt~~dw 208 (344)
T KOG2902|consen 148 ----------FDAEKIFLPTLLQLHQR------FPQLKIVLEHCTTM-DAVNFVESAK--EGSVAATVTAHHLLLTRNDW 208 (344)
T ss_pred ----------ecchhhhHHHHHHHHHh------CccceeHHHhcccH-HHHHHHHhhc--CCceeeEeehheeEEehhhh
Confidence 01233345556665554 35888999999998 8888888754 44566677899999999886
Q ss_pred CCCCCceeEcCCCCChhhHHHHHHHHhcCCe-eEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCC
Q 010547 332 PDGDTRFKCAPPIRDAANKEKLWEALMDGHI-DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV 410 (507)
Q Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~-~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gl 410 (507)
+. +..--+-|....+.+++.+.++.-.|-+ .-+|||.+|.....+...++. .|+......++.+.+...+.|
T Consensus 209 qg-~P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~~~~~c-----AGvysqpfA~sy~A~VFde~g- 281 (344)
T KOG2902|consen 209 QG-QPHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHPRSRKESSCGC-----AGVYSQPFALSYYAKVFDEAG- 281 (344)
T ss_pred cC-CCcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCcccccccCCCc-----ceeecccchHHHHHHHHhhhc-
Confidence 54 4444555667778888888888887754 789999999877766533221 122222222333333333433
Q ss_pred CHHHHHHHHhhchhHHhCC
Q 010547 411 TLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 411 s~~~al~~~T~n~A~~lgl 429 (507)
.++.+-..++.+|-...++
T Consensus 282 aLd~Lk~F~s~fG~~FY~~ 300 (344)
T KOG2902|consen 282 ALDKLKAFTSFFGPDFYGL 300 (344)
T ss_pred hHHHHhhhHhhcCcceecc
Confidence 2334444566777788887
No 119
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.86 E-value=5.6e-07 Score=84.70 Aligned_cols=241 Identities=20% Similarity=0.209 Sum_probs=126.5
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcc--
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY-- 177 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 177 (507)
|||+|+|+...... .+.....+.+.+.|+++++... +. .+......+.+... ..+....|+.+....
T Consensus 1 ~~D~H~H~~~~~~~--~~~~~~l~~~~~~gv~~~v~~~--~~-----~~~~~~~~~la~~~--~~i~~~~G~hP~~~~~~ 69 (251)
T cd01310 1 LIDTHCHLDFPQFD--ADRDDVLARAREAGVIKIIVVG--TD-----LKSSKRALELAKKY--DNVYAAVGLHPHDADEH 69 (251)
T ss_pred CEEeeeCCCchhhc--cCHHHHHHHHHHcCCCEEEEeC--CC-----HHHHHHHHHHHHhC--CCeEEEEeeCcchhhcC
Confidence 69999999765422 2356667778899999999774 11 12333333333322 222222334433221
Q ss_pred ---cHHHHHHHHH-cCCcEEEEc-ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccc
Q 010547 178 ---NASALEALLN-AGVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (507)
Q Consensus 178 ---~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 252 (507)
..+++++..+ .+..+++.. +.............+.++.+++.|+++++++.+|+...
T Consensus 70 ~~~~~~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~~------------------ 131 (251)
T cd01310 70 VDEDLDLLELLAANPKVVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRDA------------------ 131 (251)
T ss_pred CHHHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCc------------------
Confidence 2445555543 244555321 11100000001234668889999999999999998421
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC
Q 010547 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 332 (507)
Q Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~ 332 (507)
...+++++++.+ .....+.|... ...+.++.+.+.|+.+...... . .
T Consensus 132 ----------------~~~~~~l~~~~~------~~~~~i~H~~~--~~~~~~~~~~~~g~~~~~~~~~--~-~------ 178 (251)
T cd01310 132 ----------------HEDVLEILKEYG------PPKRGVFHCFS--GSAEEAKELLDLGFYISISGIV--T-F------ 178 (251)
T ss_pred ----------------hHHHHHHHHhcC------CCCCEEEEccC--CCHHHHHHHHHcCCEEEeeeee--c-c------
Confidence 134566666541 12334445554 2235666666677665543211 0 0
Q ss_pred CCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcC
Q 010547 333 DGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYG 409 (507)
Q Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~g 409 (507)
... ..+.+.+..+ -.+.++||+.-..... + .++ .+....+....... ...|
T Consensus 179 ------------~~~---~~~~~~~~~~~~dril~~TD~p~~~~~~-------~---~~~-~~~~~~~~~~~~~la~~~g 232 (251)
T cd01310 179 ------------KNA---NELREVVKEIPLERLLLETDSPYLAPVP-------F---RGK-RNEPAYVKHVAEKIAELKG 232 (251)
T ss_pred ------------CCC---HHHHHHHHhCChHHEEEcccCCCCCCCC-------C---CCC-CCCChhHHHHHHHHHHHHC
Confidence 011 1122333333 3578999974221110 0 001 11222244444443 4589
Q ss_pred CCHHHHHHHHhhchhHHhC
Q 010547 410 VTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 410 ls~~~al~~~T~n~A~~lg 428 (507)
++.+++.+..+.|++++||
T Consensus 233 l~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 233 ISVEEVAEVTTENAKRLFG 251 (251)
T ss_pred cCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999986
No 120
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.85 E-value=4e-07 Score=85.75 Aligned_cols=238 Identities=20% Similarity=0.251 Sum_probs=124.8
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc---
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--- 176 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 176 (507)
|||+|+|+...... .+.....+.+.+.|+++++... +. ........+..+... .+....|+.+...
T Consensus 1 ~iD~H~Hl~~~~~~--~~~~~~~~~~~~~Gv~~~v~~~--~~-----~~~~~~~~~~~~~~~--~i~~~~GihP~~~~~~ 69 (252)
T TIGR00010 1 LIDAHCHLDFLDFE--EDVEEVIERAKAAGVTAVVAVG--TD-----LEDFLRALELAEKYP--NVYAAVGVHPLDVDDD 69 (252)
T ss_pred CEEeccCCCChhhc--cCHHHHHHHHHHcCCCEEEEec--CC-----HHHHHHHHHHHHHCC--CEEEEEEeCcchhhcC
Confidence 69999998754322 2467778888899999999664 11 233333333333221 3333333433221
Q ss_pred --ccHHHHHHHHH-cCCcEEEEcccCCCCCCCCCC-----CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcC
Q 010547 177 --YNASALEALLN-AGVLGLKSFMCPSGINDFPMT-----NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 248 (507)
Q Consensus 177 --~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 248 (507)
...+++++..+ .++.+++.. +. +..+.. ..+.+.+.++.|++++++|.+|+....
T Consensus 70 ~~~~~~~l~~~l~~~~~~~iGEi-Gl---d~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~------------- 132 (252)
T TIGR00010 70 TKEDIKELERLAAHPKVVAIGET-GL---DYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAE------------- 132 (252)
T ss_pred CHHHHHHHHHHccCCCEEEEEec-cc---CcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCcc-------------
Confidence 12234444432 234455442 11 111111 236788889999999999999994321
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
..+++++++.+ .....+.|... ...+.+.+..+.|+-+...... .+
T Consensus 133 ---------------------~~~~~~l~~~~------~~~~~i~H~~~--~~~~~~~~~~~~g~~~~~~~~~---~~-- 178 (252)
T TIGR00010 133 ---------------------EDVLDILREEK------PKVGGVLHCFT--GDAELAKKLLDLGFYISISGIV---TF-- 178 (252)
T ss_pred ---------------------HHHHHHHHhcC------CCCCEEEEccC--CCHHHHHHHHHCCCeEeeceeE---ec--
Confidence 23445554431 11233446654 4556777777777665543110 00
Q ss_pred cCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHH-HHH
Q 010547 329 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW-SYG 405 (507)
Q Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~ 405 (507)
+.. ..+.+.++.. -.+.++||........ +. +.... ...+.... ...
T Consensus 179 ----------------~~~---~~~~~~i~~~~~dril~~TD~p~~~~~~-------~~---~~~~~-p~~i~~~~~~~a 228 (252)
T TIGR00010 179 ----------------KNA---KSLREVVRKIPLERLLVETDSPYLAPVP-------YR---GKRNE-PAFVRYTVEAIA 228 (252)
T ss_pred ----------------CCc---HHHHHHHHhCCHHHeEecccCCCCCCCC-------CC---CCCCC-ChhHHHHHHHHH
Confidence 011 1223333332 4678999975221100 00 00011 01122212 223
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCC
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl 429 (507)
...|++++++.++++.|++++|++
T Consensus 229 ~~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 229 EIKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhCc
Confidence 345999999999999999999975
No 121
>PRK10812 putative DNAse; Provisional
Probab=98.66 E-value=9.4e-06 Score=76.37 Aligned_cols=246 Identities=16% Similarity=0.163 Sum_probs=132.1
Q ss_pred eeecccccCCCCCC-CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEeccccCCCc
Q 010547 100 LIDVHAHLDDPGRT-EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVPENA 176 (507)
Q Consensus 100 fID~H~H~~~~~~~-~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 176 (507)
+||+|+|+...... ..++.......+.+.||..++..+ ...+......+.+.. .....++.|...... .
T Consensus 3 ~iDtH~Hl~~~~~~~~~~d~~~vl~~a~~~gv~~~~~~~-------~~~~~~~~~~~l~~~~~~v~~~~GiHP~~~~~-~ 74 (265)
T PRK10812 3 LVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVA-------TTLPGYRHMRDLVGERDNVVFSCGVHPLNQDE-P 74 (265)
T ss_pred eEEeccCCCCccchhhhcCHHHHHHHHHHcCCCEEEEeC-------CCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCC-h
Confidence 79999999743221 123567778888899999888553 234555555544443 233333433322211 2
Q ss_pred ccHHHHHHHHHc-CCcEEEEc-ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccc
Q 010547 177 YNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254 (507)
Q Consensus 177 ~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 254 (507)
...+.+.++... .+.+++-. +.+...........+.+++.++.|+++++|+.+|+....
T Consensus 75 ~~~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~e~~~Pv~iH~r~a~------------------- 135 (265)
T PRK10812 75 YDVEELRRLAAEEGVVAMGETGLDYYYTPETKVRQQESFRHHIQIGRELNKPVIVHTRDAR------------------- 135 (265)
T ss_pred hHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch-------------------
Confidence 234455555443 33344331 111000000012234578889999999999999995422
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCC
Q 010547 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG 334 (507)
Q Consensus 255 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~ 334 (507)
..+++++++.... ..+. +.|+.+ ++.+.++.+.+.|..+++....
T Consensus 136 ---------------~~~l~iL~~~~~~----~~~~-v~H~fs--G~~~~a~~~~~~G~~is~~g~~------------- 180 (265)
T PRK10812 136 ---------------ADTLAILREEKVT----DCGG-VLHCFT--EDRETAGKLLDLGFYISFSGIV------------- 180 (265)
T ss_pred ---------------HHHHHHHHhhcCC----CCCE-EEEeec--CCHHHHHHHHHCCCEEEECeee-------------
Confidence 2445555543110 1122 467776 6677888888888766653110
Q ss_pred CCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCC
Q 010547 335 DTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVT 411 (507)
Q Consensus 335 ~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls 411 (507)
.......+.+.++.. -.+.+.||..-..+.. +. +-..--..+...... +.-.|++
T Consensus 181 -----------t~~~~~~~~~~~~~ipldrlLlETD~P~~~p~~-------~~----g~~n~P~~i~~v~~~ia~l~g~~ 238 (265)
T PRK10812 181 -----------TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVP-------HR----GKENQPAMVRDVAEYMAVLKGVS 238 (265)
T ss_pred -----------ecCccHHHHHHHHhCChhhEEEecCCCCCCCcC-------CC----CCCCCcHHHHHHHHHHHHHhCCC
Confidence 001112233444443 3568999964221110 00 000001112322232 3446899
Q ss_pred HHHHHHHHhhchhHHhCC
Q 010547 412 LEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 412 ~~~al~~~T~n~A~~lgl 429 (507)
.+++.+..+.|+.++|++
T Consensus 239 ~eei~~~~~~N~~~lf~~ 256 (265)
T PRK10812 239 VEELAQVTTDNFARLFHI 256 (265)
T ss_pred HHHHHHHHHHHHHHHHCC
Confidence 999999999999999998
No 122
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.58 E-value=2.1e-05 Score=72.82 Aligned_cols=241 Identities=19% Similarity=0.202 Sum_probs=136.3
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEeccccCCC--
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVPEN-- 175 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-- 175 (507)
|||+|+|+... ...++.......+...||+.++..+ ...+......+.++. ..+..++.+... ...
T Consensus 3 liDtH~HL~~~--~~~~d~~~vi~~a~~~gv~~~~~~g-------~~~~~~~~~~~la~~y~~v~~~~G~HP~~-~~~~~ 72 (256)
T COG0084 3 LIDTHCHLDFE--EFDEDRDEVIARAREAGVKKMVVVG-------TDLEDFKRALELAEKYPNVYAAVGVHPLD-ADEHS 72 (256)
T ss_pred cEEeeeCCCch--hhcCCHHHHHHHHHHcCCcEEEEee-------cCHHHHHHHHHHHHhCCCeEEEEeeCCCc-ccccc
Confidence 79999999872 2334566778888999999999664 234444444444443 333334443322 111
Q ss_pred cccHHHHHHHHH--cCCcEEEEcccCCCCCCCCC-C-----CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCc
Q 010547 176 AYNASALEALLN--AGVLGLKSFMCPSGINDFPM-T-----NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 247 (507)
Q Consensus 176 ~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~-~-----~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 247 (507)
+...+.+.++.. ..+..++.. +- ++... . -.+.+++.++.|+++++|+.+|+.+..
T Consensus 73 ~~~~~~l~~~~~~~~~vvaIGEi-GL---Dy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~------------ 136 (256)
T COG0084 73 EEDLEELEQLAEHHPKVVAIGEI-GL---DYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAH------------ 136 (256)
T ss_pred HHHHHHHHHHHhcCCCeEEEEec-cc---CccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccH------------
Confidence 234455666664 344444442 11 11111 1 235688889999999999999996532
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccc
Q 010547 248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS 327 (507)
Q Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~ 327 (507)
+.+++++++... ..--+.|+.+ ++.++.+.+.+.|.-+++.-..
T Consensus 137 ----------------------~d~~~iL~~~~~------~~~gi~HcFs--Gs~e~a~~~~d~G~yisisG~i------ 180 (256)
T COG0084 137 ----------------------EDTLEILKEEGA------PVGGVLHCFS--GSAEEARKLLDLGFYISISGIV------ 180 (256)
T ss_pred ----------------------HHHHHHHHhcCC------CCCEEEEccC--CCHHHHHHHHHcCeEEEECcee------
Confidence 566777776411 2345788888 7888999999998766553211
Q ss_pred ccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHH
Q 010547 328 AEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGR 406 (507)
Q Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 406 (507)
.++ .......+.+.+.-. ...+-||++-..+.. +. |-..-...+..... .+.
T Consensus 181 ---------tfk------~a~~~~ev~~~iPld-rLL~ETDsPyl~P~p-------~r----GkrNeP~~v~~v~~~iAe 233 (256)
T COG0084 181 ---------TFK------NAEKLREVARELPLD-RLLLETDAPYLAPVP-------YR----GKRNEPAYVRHVAEKLAE 233 (256)
T ss_pred ---------ecC------CcHHHHHHHHhCCHh-HeEeccCCCCCCCcC-------CC----CCCCCchHHHHHHHHHHH
Confidence 001 111222222222222 246899954322211 10 10111111222222 234
Q ss_pred hcCCCHHHHHHHHhhchhHHhCC
Q 010547 407 KYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 407 ~~gls~~~al~~~T~n~A~~lgl 429 (507)
-.|++++++.+..|.|.-+++++
T Consensus 234 lk~~~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 234 LKGISAEEVAEITTENAKRLFGL 256 (256)
T ss_pred HhCCCHHHHHHHHHHHHHHHhcC
Confidence 45899999999999999988874
No 123
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.53 E-value=3.2e-05 Score=72.50 Aligned_cols=248 Identities=18% Similarity=0.190 Sum_probs=130.8
Q ss_pred ecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEeccccCC
Q 010547 97 MPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVPE 174 (507)
Q Consensus 97 ~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 174 (507)
++.+||+|+|+..... .++.......+...||+.++..+ ...+......+.... .....++.+......
T Consensus 2 ~~~~iD~HcHl~~~~~--~~~~~~~l~~a~~~gv~~~~~~~-------~~~~~~~~~~~l~~~~~~v~~~~GiHP~~~~~ 72 (258)
T PRK11449 2 ICRFIDTHCHFDFPPF--SGDEEASLQRAAQAGVGKIIVPA-------TEAENFARVLALAERYQPLYAALGLHPGMLEK 72 (258)
T ss_pred CceEEEeccCCCChhh--ccCHHHHHHHHHHCCCCEEEEee-------CCHHHHHHHHHHHHhCCCEEEEEeeCcCcccc
Confidence 4569999999975332 23456667778889999988653 234444444444432 223333333322222
Q ss_pred -CcccHHHHHHHHH-c--CCcEEEEcccCCCCCCCCC--CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcC
Q 010547 175 -NAYNASALEALLN-A--GVLGLKSFMCPSGINDFPM--TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 248 (507)
Q Consensus 175 -~~~~~~~~~~~~~-~--g~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 248 (507)
.....+.+.++.. . .+.+++.. +.+....... .-.+.+.+.++.|++++.||.+|+....
T Consensus 73 ~~~~~~~~l~~~l~~~~~~~~aIGEi-GLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~iH~r~a~------------- 138 (258)
T PRK11449 73 HSDVSLDQLQQALERRPAKVVAVGEI-GLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH------------- 138 (258)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEec-ccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcc-------------
Confidence 1223444554443 1 23344331 1110000000 1235688889999999999999996432
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
..+++++++.+. ..-.+.|+.+ ++.+.++.+.+.|..+++.-..
T Consensus 139 ---------------------~~~~~il~~~~~------~~~~i~H~fs--G~~~~a~~~l~~G~~iS~~g~i------- 182 (258)
T PRK11449 139 ---------------------DKLAMHLKRHDL------PRTGVVHGFS--GSLQQAERFVQLGYKIGVGGTI------- 182 (258)
T ss_pred ---------------------HHHHHHHHhcCC------CCCeEEEcCC--CCHHHHHHHHHCCCEEEeCccc-------
Confidence 355555554311 1123678877 5677888888888765542110
Q ss_pred cCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHh
Q 010547 329 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRK 407 (507)
Q Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 407 (507)
.+. .......+.+.+... .+.+.||++-.... ++. +-..-...+...+.. +.-
T Consensus 183 --------t~~------~~~~~~~~~~~ipld-riL~ETD~P~l~p~-------~~~----~~~n~p~~~~~~~~~ia~l 236 (258)
T PRK11449 183 --------TYP------RASKTRDVIAKLPLA-SLLLETDAPDMPLN-------GFQ----GQPNRPEQAARVFDVLCEL 236 (258)
T ss_pred --------ccc------CcHHHHHHHHhCChh-hEEEecCCCCCCCC-------CCC----CCCCCChHHHHHHHHHHHH
Confidence 000 111122222222222 35799996532111 010 000011113333333 455
Q ss_pred cCCCHHHHHHHHhhchhHHhCC
Q 010547 408 YGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 408 ~gls~~~al~~~T~n~A~~lgl 429 (507)
.+++++++.+..+.|..++||+
T Consensus 237 ~~~~~~el~~~~~~N~~~lf~~ 258 (258)
T PRK11449 237 RPEPADEIAEVLLNNTYTLFNV 258 (258)
T ss_pred HCcCHHHHHHHHHHHHHHHhCc
Confidence 6899999999999999999875
No 124
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=98.44 E-value=4.5e-05 Score=73.56 Aligned_cols=158 Identities=18% Similarity=0.162 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCc
Q 010547 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~ 288 (507)
..+.+++.++.|+++++++.+|+..... .....++.+.+.+. ...
T Consensus 134 q~~~f~~~~~lA~~~~~Pv~iH~~~~~~-------------------------------~~~~~l~~l~~~g~----~~~ 178 (293)
T cd00530 134 EEKVLRAAARAQKETGVPISTHTQAGLT-------------------------------MGLEQLRILEEEGV----DPS 178 (293)
T ss_pred HHHHHHHHHHHHHHHCCeEEEcCCCCcc-------------------------------ccHHHHHHHHHcCC----Chh
Confidence 3457889999999999999999954200 11233444443210 122
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEe
Q 010547 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLS 366 (507)
Q Consensus 289 ~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lg 366 (507)
++.+.|+... .+.+.++.+.+.|..+........ .. ...++ .......+.++++.|. .+.++
T Consensus 179 ~~vi~H~~~~-~~~~~~~~~~~~G~~i~~~~~~~~-----------~~--~~~~~--~~~~~~~l~~~~~~~~~d~ill~ 242 (293)
T cd00530 179 KVVIGHLDRN-DDPDYLLKIAALGAYLEFDGIGKD-----------KI--FGYPS--DETRADAVKALIDEGYGDRLLLS 242 (293)
T ss_pred heEEeCCCCC-CCHHHHHHHHhCCCEEEeCCCCcc-----------cc--cCCCC--HHHHHHHHHHHHHCCCcCCEEEe
Confidence 4678899843 456788888888876655321100 00 00000 1233455777888876 45999
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHh
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLA 427 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~l 427 (507)
||........ . .+.-.+....+......+...|++.+++.++.+.||+++|
T Consensus 243 TD~p~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 243 HDVFRKSYLE-K---------RYGGHGYDYILTRFIPRLRERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred CCcCchhhhh-h---------ccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence 9965322210 0 0111233333445555677889999999999999999875
No 125
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.30 E-value=2.3e-05 Score=73.79 Aligned_cols=245 Identities=21% Similarity=0.244 Sum_probs=125.9
Q ss_pred eecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc---CceeeEEEeccccCC-Cc
Q 010547 101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGFWGGLVPE-NA 176 (507)
Q Consensus 101 ID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~ 176 (507)
||+|+|+.... ..++.....+.+.+.|++.++... ...+......+.... .....++.+...... ..
T Consensus 1 iD~H~Hl~~~~--~~~~~~~~~~~~~~~g~~~~i~~~-------~~~~~~~~~~~~~~~~~~~v~~~~GiHP~~~~~~~~ 71 (255)
T PF01026_consen 1 IDAHCHLDSPR--FEEDRPEVLERAREAGVSAIIIVS-------TDPEDWERVLELASQYPDRVYPALGIHPWEAHEVNE 71 (255)
T ss_dssp EEEEE-TTSGG--GTTTHHHHHHHHHHTTEEEEEEEE-------SSHHHHHHHHHHHHHTTTEEEEEE---GGGGGGHSH
T ss_pred CcCccCCCChh--hCcCHHHHHHHHHHcCCCEEEEcC-------CCHHHhHHHHHHHhcCCCeEEEEecCCcchhhhhhH
Confidence 89999998721 123456667888999999997553 122333343333332 233444444433333 22
Q ss_pred ccHHHHHHH--HH-cCCcEEEEc-ccCC-CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcc
Q 010547 177 YNASALEAL--LN-AGVLGLKSF-MCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (507)
Q Consensus 177 ~~~~~~~~~--~~-~g~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 251 (507)
...+.++++ .. ..+.+++.. +.+. ..........+.+.+.+++|++++.++.+|+...
T Consensus 72 ~~~~~l~~l~~~~~~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a----------------- 134 (255)
T PF01026_consen 72 EDLEELEELINLNRPKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKA----------------- 134 (255)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESH-----------------
T ss_pred HHHHHHHHHHHhccccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCc-----------------
Confidence 334555555 32 334344331 1110 0000001233568888999999999999999542
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCC
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI 331 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~ 331 (507)
..++++++++... .....+.|+.+ ++.+.++...+.|.-+++..... .
T Consensus 135 -----------------~~~~l~il~~~~~-----~~~~~i~H~f~--g~~~~~~~~~~~g~~~S~~~~~~---~----- 182 (255)
T PF01026_consen 135 -----------------HEELLEILKEYGP-----PNLRVIFHCFS--GSPEEAKKFLDLGCYFSFSGAIT---F----- 182 (255)
T ss_dssp -----------------HHHHHHHHHHTTG-----GTSEEEETT----S-HHHHHHHHHTTEEEEEEGGGG---S-----
T ss_pred -----------------HHHHHHHHHhccc-----cceeEEEecCC--CCHHHHHHHHhcCceEEeccccc---c-----
Confidence 2467777776511 01166788877 67777888878776665532210 0
Q ss_pred CCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCC
Q 010547 332 PDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGV 410 (507)
Q Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gl 410 (507)
+.......+.+.+. --.+.+-||.+-... .. +. +.......+..... .+.-.++
T Consensus 183 -------------~~~~~~~~~~~~ip-~drillETD~P~~~~-~~------~~----~~~~~p~~i~~~~~~la~~~~~ 237 (255)
T PF01026_consen 183 -------------KNSKKVRELIKAIP-LDRILLETDAPYLAP-DP------YR----GKPNEPSNIPKVAQALAEIKGI 237 (255)
T ss_dssp -------------TTSHHHHHHHHHS--GGGEEEE-BTTSSEC-TT------ST----TSE--GGGHHHHHHHHHHHHTS
T ss_pred -------------cccHHHHHHHhcCC-hhhEEEcCCCCcCCc-cc------cC----CCCCChHHHHHHHHHHHHHcCC
Confidence 01111222222221 234679999532111 00 00 00111112333333 3455789
Q ss_pred CHHHHHHHHhhchhHHhC
Q 010547 411 TLEQLASWWSERPAKLAG 428 (507)
Q Consensus 411 s~~~al~~~T~n~A~~lg 428 (507)
+++++.+..+.|..+++|
T Consensus 238 ~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 238 SLEELAQIIYENAKRLFG 255 (255)
T ss_dssp THHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 999999999999999886
No 126
>PRK10425 DNase TatD; Provisional
Probab=98.26 E-value=0.00034 Score=65.55 Aligned_cols=252 Identities=12% Similarity=0.067 Sum_probs=128.2
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC--ceeeEEEeccccCCC-c
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLVPEN-A 176 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~ 176 (507)
|||+|+|+..... .++.......+.+.||..++..+ ...+......+..... ....++.|....... .
T Consensus 1 ~iDtH~HL~~~~~--~~d~~~vl~~a~~~gv~~~i~~~-------~~~~~~~~~~~l~~~~~~v~~~~GiHP~~~~~~~~ 71 (258)
T PRK10425 1 MFDIGVNLTSSQF--AKDRDDVVARAFAAGVNGMLITG-------TNLRESQQAQKLARQYPSCWSTAGVHPHDSSQWQA 71 (258)
T ss_pred CEEeeeCcCChhh--hccHHHHHHHHHHCCCCEEEEeC-------CCHHHHHHHHHHHHhCCCEEEEEEeCcCccccCCH
Confidence 6999999975332 24577778888899998888553 2344444444444332 233334333222221 2
Q ss_pred ccHHHHHHHHHc-CCcEEEEc-ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccc
Q 010547 177 YNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254 (507)
Q Consensus 177 ~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 254 (507)
...+.+.++.+. ...+++.. +.+.........-.+.+++.++.|++++.|+.+|+....
T Consensus 72 ~~~~~l~~~~~~~~~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~Pv~iH~r~a~------------------- 132 (258)
T PRK10425 72 ATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMPVFMHCRDAH------------------- 132 (258)
T ss_pred HHHHHHHHhccCCCEEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeCch-------------------
Confidence 223444444432 22233221 111000000001135578889999999999999995321
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCC
Q 010547 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG 334 (507)
Q Consensus 255 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~ 334 (507)
.++++++++... ..+-.+.|+.+ ++.+.++.+.+.|.-+++....
T Consensus 133 ---------------~~~l~iL~~~~~-----~~~~~i~H~fs--G~~~~~~~~l~~G~~~si~g~i------------- 177 (258)
T PRK10425 133 ---------------ERFMALLEPWLD-----KLPGAVLHCFT--GTREEMQACLARGLYIGITGWV------------- 177 (258)
T ss_pred ---------------HHHHHHHHHhcc-----CCCCeEEEecC--CCHHHHHHHHHCCCEEEECcee-------------
Confidence 345555554210 11123568887 6778888888888766553111
Q ss_pred CCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHH
Q 010547 335 DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLE 413 (507)
Q Consensus 335 ~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~ 413 (507)
... +.......+.+.+.-. .+.+-||++-..+.. +.....+-..-...+...... +.-.+++++
T Consensus 178 ----~~~---~~~~~~~~~~~~ipld-rlLlETDaP~l~P~~-------~~~~~~~~~n~P~~i~~v~~~iA~l~~~~~~ 242 (258)
T PRK10425 178 ----CDE---RRGLELRELLPLIPAE-RLLLETDAPYLLPRD-------LTPKPASRRNEPAFLPHILQRIAHWRGEDAA 242 (258)
T ss_pred ----ecc---cccHHHHHHHHhCChH-HEEEeccCCCCCCCC-------cCCCCCCCCCCcHHHHHHHHHHHHHHCcCHH
Confidence 000 0011111222222211 356899954211100 000000001111123333333 445689999
Q ss_pred HHHHHHhhchhHHhCC
Q 010547 414 QLASWWSERPAKLAGQ 429 (507)
Q Consensus 414 ~al~~~T~n~A~~lgl 429 (507)
++.+..+.|.-+.+|+
T Consensus 243 ~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 243 WLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999999888874
No 127
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=98.23 E-value=8.1e-05 Score=72.80 Aligned_cols=144 Identities=20% Similarity=0.181 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCC
Q 010547 207 MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286 (507)
Q Consensus 207 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (507)
..+++.+..+++.|+++|.++.+|+.+... ...+...+ .+.
T Consensus 168 ~~~~~~~~~~~~~A~~~g~~i~~Ha~E~~~-----------------------------~~~~~~~~---~~~------- 208 (324)
T TIGR01430 168 GGPPPDFVRAFAIARELGLHLTVHAGELGG-----------------------------PESVREAL---DDL------- 208 (324)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEecCCCCC-----------------------------hHHHHHHH---HHc-------
Confidence 345889999999999999999999954311 00111111 111
Q ss_pred CceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEe
Q 010547 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLS 366 (507)
Q Consensus 287 g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lg 366 (507)
|. ..+.|........+.++.+++.|+.+.. ||..-... + ..+ .....++.+++++|+++++|
T Consensus 209 g~-~ri~Hg~~l~~~~~~i~~l~~~gi~v~~--cP~Sn~~l-------~----~~~----~~~~~pi~~l~~~Gv~v~ig 270 (324)
T TIGR01430 209 GA-TRIGHGVRALEDPELLKRLAQENITLEV--CPTSNVAL-------G----VVK----SLAEHPLRRFLEAGVKVTLN 270 (324)
T ss_pred Cc-hhcchhhhhccCHHHHHHHHHcCceEEE--CCcccccc-------c----ccC----CcccChHHHHHHCCCEEEEC
Confidence 11 1244544321234567777788876544 66321110 0 000 01123567889999999999
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
||....... . +...+.. ....+++++| ++.+|.|+++++-+
T Consensus 271 TD~~~~~~~-~--------------------l~~e~~~a~~~~~l~~~e-l~~~~~na~~~~f~ 312 (324)
T TIGR01430 271 SDDPAYFGS-Y--------------------LTEEYEIAAKHAGLTEEE-LKQLARNALEGSFL 312 (324)
T ss_pred CCCCcccCC-C--------------------HHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCC
Confidence 997643221 1 3333333 3457999999 77899999998766
No 128
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=98.21 E-value=3e-06 Score=67.68 Aligned_cols=140 Identities=24% Similarity=0.336 Sum_probs=87.6
Q ss_pred CCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc
Q 010547 93 EAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV 172 (507)
Q Consensus 93 g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (507)
||+|+|||||.|+|+..++....+.+.. |+..+| ++.|.. .. +.
T Consensus 1 ~kli~~g~vd~hVhlrepg~~~keti~t-----------T~~amp-nt~paP----------------a~--------it 44 (142)
T PF12890_consen 1 GKLILPGLVDVHVHLREPGFEAKETIET-----------TWCAMP-NTFPAP----------------AG--------IT 44 (142)
T ss_pred Cceeehhhhhhhhhhhcccchhhhhhhc-----------eeeecC-ccCCCC----------------cc--------ee
Confidence 6899999999999999887664443322 888887 666654 00 11
Q ss_pred CCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccc
Q 010547 173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (507)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 252 (507)
.+. .|-.++.. .. ++........+.+..+. ++++..+..||++...+..+....+ ...
T Consensus 45 v~~------------~~~e~~af--sd---dg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~g----e~~ 102 (142)
T PF12890_consen 45 VED------------DGEEAFAF--SD---DGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDG----ELP 102 (142)
T ss_pred eee------------cCcceEEE--ec---CCceeeeHHHHHHHHHH-HHcccHHHHhhcccccccccccccc----hhh
Confidence 000 01112211 11 33334455666777777 8899999999998876655444322 222
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh
Q 010547 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA 298 (507)
Q Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~ 298 (507)
...+. ..+..+|...+.+-..++++. |-..|+.|+++.
T Consensus 103 q~~g~-~L~G~cEs~~~~rd~lLak~~-------g~~yhVchvstk 140 (142)
T PF12890_consen 103 QFLGV-YLKGNCESVQCARDVLLAKAT-------GCHYHVCHVSTK 140 (142)
T ss_pred HHhCC-cCCCcchHHHHHHHHHhhhcc-------CCcEEEEEEecc
Confidence 22220 133367888889999999976 888999998864
No 129
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=98.16 E-value=0.00015 Score=70.92 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 010547 208 TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 287 (507)
Q Consensus 208 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g 287 (507)
.+.+.+..+++.|+++|.++.+|+.+... ...+...++ ..+. .
T Consensus 170 ~~~~~~~~~~~~A~~~g~~v~~H~~E~~~-----------------------------~~~~~~a~~---~~g~-----~ 212 (325)
T cd01320 170 FPPEKFVRAFQRAREAGLRLTAHAGEAGG-----------------------------PESVRDALD---LLGA-----E 212 (325)
T ss_pred CCHHHHHHHHHHHHHCCCceEEeCCCCCC-----------------------------HHHHHHHHH---HcCC-----c
Confidence 37889999999999999999999854211 011122222 1111 1
Q ss_pred ceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeC
Q 010547 288 AHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSS 367 (507)
Q Consensus 288 ~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgt 367 (507)
.+.|+.......+.++.+++.|+.+.. ||..- +.... . ......++.++++.|+++++||
T Consensus 213 ---~i~H~~~l~~~~~~~~~l~~~gi~v~~--~P~sn------~~l~~-----~----~~~~~~p~~~l~~~Gv~v~lgT 272 (325)
T cd01320 213 ---RIGHGIRAIEDPELVKRLAERNIPLEV--CPTSN------VQTGA-----V----KSLAEHPLRELLDAGVKVTINT 272 (325)
T ss_pred ---ccchhhccCccHHHHHHHHHcCCeEEE--CCCcc------ccccc-----c----CCcccChHHHHHHCCCEEEECC
Confidence 244444321233567777788876554 66311 10000 0 0011335678899999999999
Q ss_pred CCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC
Q 010547 368 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 368 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl 429 (507)
|..+..... +...+..+ ...+++++|+ ..+|.|++++.-+
T Consensus 273 D~~~~~~~~---------------------~~~e~~~~~~~~~l~~~el-~~~~~na~~~~f~ 313 (325)
T cd01320 273 DDPTVFGTY---------------------LTDEYELLAEAFGLTEEEL-KKLARNAVEASFL 313 (325)
T ss_pred CCCcccCCC---------------------HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHhCC
Confidence 976432211 22233333 4569999995 5588999998765
No 130
>PRK09875 putative hydrolase; Provisional
Probab=98.12 E-value=0.0011 Score=63.02 Aligned_cols=154 Identities=18% Similarity=0.206 Sum_probs=100.7
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCc
Q 010547 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~ 288 (507)
....++++.+.+++.|.++.+|...... . .+.++++.+.+. .-.
T Consensus 137 E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~-------------------------------g-~e~l~il~e~Gv----d~~ 180 (292)
T PRK09875 137 EEKVFIAAALAHNQTGRPISTHTSFSTM-------------------------------G-LEQLALLQAHGV----DLS 180 (292)
T ss_pred HHHHHHHHHHHHHHHCCcEEEcCCCccc-------------------------------h-HHHHHHHHHcCc----Ccc
Confidence 3345777788888899999999743211 1 223555555411 023
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEe
Q 010547 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLS 366 (507)
Q Consensus 289 ~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lg 366 (507)
++.+.|+... ...+.+.++.+.|+-+.++..-. . ...| .......+..+++.| -.+.++
T Consensus 181 rvvi~H~d~~-~d~~~~~~l~~~G~~l~fD~~g~--------------~-~~~p---d~~r~~~i~~L~~~Gy~drilLS 241 (292)
T PRK09875 181 RVTVGHCDLK-DNLDNILKMIDLGAYVQFDTIGK--------------N-SYYP---DEKRIAMLHALRDRGLLNRVMLS 241 (292)
T ss_pred eEEEeCCCCC-CCHHHHHHHHHcCCEEEeccCCC--------------c-ccCC---HHHHHHHHHHHHhcCCCCeEEEe
Confidence 7899999866 77888888889998776643210 0 0011 233345566677776 457899
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
+|....+. ....+| .|+...+.......++.|++-+++=++...||+++|+
T Consensus 242 ~D~~~~~~----------~~~~gg-~G~~~i~~~~ip~L~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 242 MDITRRSH----------LKANGG-YGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred CCCCCccc----------ccccCC-CChhHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence 99753321 112222 5666667777777888999999999999999999874
No 131
>PRK09358 adenosine deaminase; Provisional
Probab=98.10 E-value=0.00038 Score=68.58 Aligned_cols=143 Identities=18% Similarity=0.145 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 010547 208 TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 287 (507)
Q Consensus 208 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g 287 (507)
.+++.+.++++.|+++|.++.+|+.+... ...+...++. . |
T Consensus 179 ~~~~~~~~~~~~A~~~g~~~~~H~~E~~~-----------------------------~~~~~~al~~---l-------g 219 (340)
T PRK09358 179 FPPSKFARAFDRARDAGLRLTAHAGEAGG-----------------------------PESIWEALDE---L-------G 219 (340)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEcCCCCCc-----------------------------hhHHHHHHHH---c-------C
Confidence 46788999999999999999999954221 1112222221 1 1
Q ss_pred ceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeC
Q 010547 288 AHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSS 367 (507)
Q Consensus 288 ~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgt 367 (507)
. -.+.|+.......+.++.+++.|+.+. +||..-... ...+. ....++.++++.|+++++||
T Consensus 220 ~-~ri~Hg~~l~~~~~~~~~l~~~gi~v~--~cP~Sn~~l-----------~~~~~----~~~~pi~~l~~~Gv~v~lgT 281 (340)
T PRK09358 220 A-ERIGHGVRAIEDPALMARLADRRIPLE--VCPTSNVQT-----------GAVPS----LAEHPLKTLLDAGVRVTINT 281 (340)
T ss_pred C-cccchhhhhccCHHHHHHHHHcCCeEE--ECCCccccc-----------cccCC----cccChHHHHHHCCCEEEECC
Confidence 1 123555443123456777778887654 466421100 00000 01235678899999999999
Q ss_pred CCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC
Q 010547 368 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 368 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl 429 (507)
|..+..... +...+..+ ...+++++++ ..++.|+.++--+
T Consensus 282 D~~~~~~~~---------------------l~~e~~~~~~~~~l~~~el-~~l~~nai~~sf~ 322 (340)
T PRK09358 282 DDPLVFGTT---------------------LTEEYEALAEAFGLSDEDL-AQLARNALEAAFL 322 (340)
T ss_pred CCCcccCCC---------------------HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHCC
Confidence 976443211 33333333 4469999996 4557788877544
No 132
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=97.87 E-value=0.0062 Score=53.72 Aligned_cols=238 Identities=19% Similarity=0.234 Sum_probs=127.6
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh-------cCceeeEEEecccc
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-------KRIYVDVGFWGGLV 172 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 172 (507)
+||+|+|+...+.. -...|..+|+-+++.......|. ...+.+....+..- .+..+....-.|..
T Consensus 2 ~iD~HiH~d~r~~e-------DlekMa~sGI~~Vit~AhdP~~~-~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGvH 73 (254)
T COG1099 2 YIDSHIHLDVRGFE-------DLEKMALSGIREVITLAHDPYPM-KTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGVH 73 (254)
T ss_pred ccccccccccccHH-------HHHHHHHhChhhhhhcccCCCCc-ccHHHHHHHHHHHHccchhhHHhhCceeeEEeccC
Confidence 79999998764322 24556677888887664222222 33444444333331 12334444444444
Q ss_pred CCC-cccH----HHHHHHH-HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccC
Q 010547 173 PEN-AYNA----SALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDD 246 (507)
Q Consensus 173 ~~~-~~~~----~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 246 (507)
+.. +... ..+..+. +.+..+++-. |....+....+.++..+++|+++++|+.+|..
T Consensus 74 Pr~iP~e~~~~l~~L~~~l~~e~VvAiGEi----GLe~~t~~E~evf~~QL~LA~e~dvPviVHTP-------------- 135 (254)
T COG1099 74 PRAIPPELEEVLEELEELLSNEDVVAIGEI----GLEEATDEEKEVFREQLELARELDVPVIVHTP-------------- 135 (254)
T ss_pred CCCCCchHHHHHHHHHhhcccCCeeEeeec----ccccCCHHHHHHHHHHHHHHHHcCCcEEEeCC--------------
Confidence 432 2212 2233332 2344455441 11222223345578889999999999999983
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccc
Q 010547 247 TLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF 326 (507)
Q Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~ 326 (507)
.....+.....++.+.+.+. ....+.+.|++.. .++...+.+.-+...+.|.-+
T Consensus 136 ---------------r~nK~e~t~~ildi~~~~~l----~~~lvvIDH~N~e-----tv~~vld~e~~vGlTvqPgKl-- 189 (254)
T COG1099 136 ---------------RRNKKEATSKILDILIESGL----KPSLVVIDHVNEE-----TVDEVLDEEFYVGLTVQPGKL-- 189 (254)
T ss_pred ---------------CCcchhHHHHHHHHHHHcCC----ChhheehhcccHH-----HHHHHHhccceEEEEecCCcC--
Confidence 22344566778888876522 1224677787663 455555555544444444110
Q ss_pred cccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH
Q 010547 327 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG 405 (507)
Q Consensus 327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 405 (507)
+......+.+. .| -++.+.||......+-. .++...-..
T Consensus 190 -------------------t~~eAveIV~e--y~~~r~ilnSD~~s~~sd~l-------------------avprtal~m 229 (254)
T COG1099 190 -------------------TVEEAVEIVRE--YGAERIILNSDAGSAASDPL-------------------AVPRTALEM 229 (254)
T ss_pred -------------------CHHHHHHHHHH--hCcceEEEecccccccccch-------------------hhhHHHHHH
Confidence 11222222222 24 45678888553322211 133334445
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCC
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl 429 (507)
...|++-++.-+.+-.|+-+++|+
T Consensus 230 ~~~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 230 EERGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred HHhcCCHHHHHHHHHHHHHHHhCc
Confidence 678999999999999998888875
No 133
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=97.58 E-value=0.00084 Score=64.31 Aligned_cols=160 Identities=18% Similarity=0.176 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
..++++....++.|.++.+|++... . . .+.++++.+.+. .-.+
T Consensus 142 k~lrAaa~A~~~TG~pI~~H~~~g~~~----------------------------~----~e~~~il~e~Gv----~~~r 185 (308)
T PF02126_consen 142 KVLRAAARAHKETGAPISTHTGRGTRM----------------------------G----LEQLDILEEEGV----DPSR 185 (308)
T ss_dssp HHHHHHHHHHHHHT-EEEEEESTTGTC----------------------------H----HHHHHHHHHTT------GGG
T ss_pred HHHHHHHHHHHHhCCeEEEcCCCCCcC----------------------------H----HHHHHHHHHcCC----ChhH
Confidence 4577777777888999999995432 1 1 233444444311 1347
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEEEecccccc-cccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEe
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL-AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLS 366 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lg 366 (507)
+.+.|+... ...+.++++.+.|+.+.++...+.. .... +..+.. ..+....+.+..++++|. .+.++
T Consensus 186 vvigH~D~~-~D~~y~~~la~~G~~l~~D~~g~~~~g~~~------~~~~~~---~~d~~ri~~l~~L~~~Gy~~qIlLS 255 (308)
T PF02126_consen 186 VVIGHMDRN-PDLDYHRELADRGVYLEFDTIGREFSGKDK------NPRVGY---PPDEERIELLKELIEEGYADQILLS 255 (308)
T ss_dssp EEETSGGGS-T-HHHHHHHHHTT-EEEETTTT-B-TTTTT------CHSCTT---S-HHHHHHHHHHHHHTTTGGGEEE-
T ss_pred eEEeCCCCC-CCHHHHHHHHhcCCEEEecCCcccccCccc------CccCCC---CCHHHHHHHHHHHHHcCCcCcEEEe
Confidence 899999965 7888889998999888776542211 0000 000001 113445567788888875 47899
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhh--hHHHHHHHHHHhcCCCHHHHHHHHhhchhHHh
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQ--FVLPVTWSYGRKYGVTLEQLASWWSERPAKLA 427 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~gls~~~al~~~T~n~A~~l 427 (507)
.|...... ....+..+.. ..+....-..++.|++-+++=++...||+|+|
T Consensus 256 ~D~~~k~~-----------~~~~gg~g~~~~~i~~~fiP~L~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 256 HDIGRKSR-----------LYRYGGGGYGYIYILTRFIPRLKERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp HHHESEEG-----------SSSCCHHHHTTTHHHHTHHHHHHHTTS-HHHHHHHHTHHHHHHH
T ss_pred cccccccc-----------ccccCCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHc
Confidence 99653111 1111222222 12234444566789999999999999999987
No 134
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=97.57 E-value=7.7e-05 Score=49.58 Aligned_cols=29 Identities=17% Similarity=0.234 Sum_probs=21.3
Q ss_pred EEEEEEECCEEEEecCcccCCCCCccccc
Q 010547 478 KVLATISRGNLVYKEGNHAPAACGSPILA 506 (507)
Q Consensus 478 ~V~~v~v~G~~v~~~g~~~~~~~~~~~~~ 506 (507)
.|.+|||||+.++++|+++++.+|+.||.
T Consensus 19 GI~~V~VNG~~vv~~g~~t~~~~G~~lrr 47 (48)
T PF07908_consen 19 GIDYVFVNGQIVVEDGEVTGARPGRVLRR 47 (48)
T ss_dssp SEEEEEETTEEEECTTEESSS----B---
T ss_pred CEEEEEECCEEEEECCeECCCCCCeEecC
Confidence 59999999999999999999999999985
No 135
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=97.55 E-value=0.079 Score=50.08 Aligned_cols=121 Identities=19% Similarity=0.194 Sum_probs=71.3
Q ss_pred ceeecccccCCCCCCC----------CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe
Q 010547 99 GLIDVHAHLDDPGRTE----------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168 (507)
Q Consensus 99 GfID~H~H~~~~~~~~----------~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (507)
|.||+|.|+....... .-........+-..||+..+-.. .. ........+.+..+. .++ ...+..
T Consensus 1 ~~iD~H~H~~~~~~~~~~~~~~~~~~~~~~e~l~~~m~~~gV~~aV~vq-~~-~~~~~n~~~~~~~~~-~~r-~~g~~~- 75 (263)
T cd01311 1 GAVDAHMHVFDPGYPFPPAPEKFTPYDPGIDDLRALRSTLGIDRVVIVQ-AS-IYGADNSNLLDALAS-NGK-ARGGAT- 75 (263)
T ss_pred CCEEeeeeeeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEeC-cc-ccCCchHHHHHHHhh-CCC-eEEEEE-
Confidence 6799999998643211 12344455666789999888653 11 111222222222221 111 112221
Q ss_pred ccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 010547 169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (507)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 232 (507)
+.+.. ...+.++++.+.|..|++......+ ..+.+.+...++.+.++|.++.+|+.
T Consensus 76 --~~p~~-~~~~~l~~~~~~g~rGvRl~~~~~~-----~~~~~~~~~~~~~~~~~gl~v~~~~~ 131 (263)
T cd01311 76 --VDPRT-TTDAELKEMHDAGVRGVRFNFLFGG-----VDNKDELDEIAKRAAELGWHVQVYFD 131 (263)
T ss_pred --ECCCC-CCHHHHHHHHHCCCeEEEEecccCC-----CCCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 22222 2357788888899999997543211 12677889999999999999999983
No 136
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=97.21 E-value=0.00065 Score=52.81 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=33.4
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP 80 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~ 80 (507)
..+++|.|+.|+|..++.++||-|+||||+.||+...+.
T Consensus 65 ~lD~VItNa~IiD~~GI~KADIGIkdG~I~gIGkAGNPd 103 (121)
T PF00449_consen 65 ALDLVITNALIIDYTGIVKADIGIKDGRIVGIGKAGNPD 103 (121)
T ss_dssp C-SEEEEEEEEEETTEEEEEEEEEETTEEEEEE-EB-TT
T ss_pred cccEEEeCcEEEecCCcEEeeEEeeCCEEEEEeccCCcc
Confidence 678999999999999999999999999999999876543
No 137
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=97.18 E-value=0.012 Score=55.68 Aligned_cols=187 Identities=15% Similarity=0.114 Sum_probs=96.9
Q ss_pred CcccHHHHHHHH-HcCCcEEEEcccCCCCCCCCCCCHHHH-HHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccc
Q 010547 175 NAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHI-KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (507)
Q Consensus 175 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 252 (507)
.+...+++++.. +.|..|++.+....+ . ......+ ..+++.+.++++++.+|+.....
T Consensus 83 ~~~~~~~l~~~~~~~g~~Gv~l~~~~~~---~-~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~---------------- 142 (273)
T PF04909_consen 83 PEDAVEELERALQELGFRGVKLHPDLGG---F-DPDDPRLDDPIFEAAEELGLPVLIHTGMTGF---------------- 142 (273)
T ss_dssp HHHHHHHHHHHHHTTTESEEEEESSETT---C-CTTSGHCHHHHHHHHHHHT-EEEEEESHTHH----------------
T ss_pred chhHHHHHHHhccccceeeeEecCCCCc---c-ccccHHHHHHHHHHHHhhccceeeeccccch----------------
Confidence 345566777666 789999998653321 1 2233333 58999999999999999730000
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC
Q 010547 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 332 (507)
Q Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~ 332 (507)
............+..++.+ .+..++.+.|+.........+..+.++.-++.+.++.-..
T Consensus 143 -------~~~~~~~~~~~~~~~~~~~------~P~l~ii~~H~G~~~~~~~~~~~l~~~~~nvy~d~s~~~~-------- 201 (273)
T PF04909_consen 143 -------PDAPSDPADPEELEELLER------FPDLRIILAHLGGPFPWWEEALRLLDRFPNVYVDLSGIPP-------- 201 (273)
T ss_dssp -------HHHHHHHHHHHHHTTHHHH------STTSEEEESGGGTTHHHHHHHHHHHHHHTTEEEECHSHHS--------
T ss_pred -------hhhhHHHHHHHHHHHHHHH------hcCCeEEEecCcccchhHHHHHHHHHhCCccccccccccc--------
Confidence 0001122233444455554 4588999999987412333333332222345544332100
Q ss_pred CCCCceeEcCCCCChhhHHHHHHHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCC
Q 010547 333 DGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV 410 (507)
Q Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gl 410 (507)
. ....+ .......+.+++.. | -++.+|||......... ............+
T Consensus 202 ---~-~~~~~---~~~~~~~l~~~~~~~g~drilfGSD~P~~~~~~~--------------------~~~~~~~~~~~~l 254 (273)
T PF04909_consen 202 ---F-WYFWP---PSFDRPFLRRAVDEFGPDRILFGSDYPHPDGASP--------------------YEYIWEAYFLDDL 254 (273)
T ss_dssp ---S-EEEET---THHCHHHHHHHHHHHTGGGEEEE--TTSSTHHHH--------------------HHHHHHHHHHHHS
T ss_pred ---c-cccCc---ccccHHHHHHHHHHhCCceEEecCCCCCCCcccc--------------------HHHHHHhhhccCC
Confidence 0 01111 22223344444433 2 36789999765443211 1111111111117
Q ss_pred CHHHHHHHHhhchhHHhCC
Q 010547 411 TLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 411 s~~~al~~~T~n~A~~lgl 429 (507)
|.++.=+....|+++++|+
T Consensus 255 ~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 255 SEEEREKILYDNARRLYGL 273 (273)
T ss_dssp SHHHHHHHHTHHHHHHHTC
T ss_pred CHHHHHHHHhHhHHHHcCc
Confidence 9999999999999999986
No 138
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=96.92 E-value=0.14 Score=46.84 Aligned_cols=139 Identities=17% Similarity=0.165 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCc
Q 010547 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~ 288 (507)
+.+.+..+++.|+..+.+++.|.++.+ ...+.++.+++++.+.+ ..
T Consensus 143 ~n~vl~~a~elA~dvdc~vqLHtes~~------------------------------~~~~~~i~~~ak~~G~~----~~ 188 (285)
T COG1831 143 SNEVLEYAMELAKDVDCAVQLHTESLD------------------------------EETYEEIAEMAKEAGIK----PY 188 (285)
T ss_pred HHHHHHHHHHHhhcCCCcEEEecCCCC------------------------------hHHHHHHHHHHHHhCCC----cc
Confidence 446688889999999999999997653 33456777777776221 22
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCC
Q 010547 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSD 368 (507)
Q Consensus 289 ~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD 368 (507)
++.-.|... .+......|+..+. ...+..+.+++..|-..++-||
T Consensus 189 ~VVkHha~p------~v~~~~~~Gi~pSV-----------------------------~asr~~v~~a~~~g~~FmmETD 233 (285)
T COG1831 189 RVVKHHAPP------LVLKCEEVGIFPSV-----------------------------PASRKNVEDAAELGPRFMMETD 233 (285)
T ss_pred eeEeecCCc------cchhhhhcCcCCcc-----------------------------cccHHHHHHHHhcCCceEeecc
Confidence 455555444 33333333432111 1223467788899999999999
Q ss_pred CCCCChhhhccccCCccccCCCCchhhhHHH-HHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 369 HSPTVPELKLLDEGNFLKAWGGISSLQFVLP-VTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
+.--.. .++.+-+-.. ++ ...+...+..++.+.+.+..-.||++.+|+
T Consensus 234 yIDDp~------------RpgavL~Pkt-VPrr~~~i~~~g~~~ee~vy~i~~E~pe~VYg~ 282 (285)
T COG1831 234 YIDDPR------------RPGAVLGPKT-VPRRTREILEKGDLTEEDVYRIHVENPERVYGI 282 (285)
T ss_pred cccCcc------------cCCCcCCccc-hhHHHHHHHHhcCCcHHHHHHHHHhCHHHHhCc
Confidence 751110 0111111111 22 334445666789999999999999999987
No 139
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=96.50 E-value=0.2 Score=48.44 Aligned_cols=140 Identities=16% Similarity=0.106 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHhcC-CcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 010547 209 NASHIKEGLSVLARYK-RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 287 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g 287 (507)
+...+...++.|++.| .++.+|+.+.. ....+...++...
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~-----------------------------~~~~v~~~~~~~~---------- 191 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETG-----------------------------NREELLQALLLLP---------- 191 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCC-----------------------------ChHHHHHHHHhcc----------
Confidence 5778889999999999 99999995421 1112334444322
Q ss_pred ceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeC
Q 010547 288 AHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSS 367 (507)
Q Consensus 288 ~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgt 367 (507)
-.+.|........+.++.++++++.+. +||..-... . ..+ ....-++.++++.|++++++|
T Consensus 192 --~RIgHg~~~~~~p~~~~~l~~~~i~ie--~CP~SN~~~-----~------~~~----~~~~hP~~~~~~~G~~v~i~T 252 (305)
T cd00443 192 --DRIGHGIFLLKHPELIYLVKLRNIPIE--VCPTSNVVL-----G------TVQ----SYEKHPFMRFFKAGLPVSLST 252 (305)
T ss_pred --ceeeceEecCCCHHHHHHHHHcCCEEE--ECcchhhhh-----c------CCC----ChhhChHHHHHHCCCeEEEeC
Confidence 234444432233457777888887654 477421111 0 000 011234678899999999999
Q ss_pred CCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 368 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 368 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
|........ +...+. .....+++.++..+++ .|+-+.-.
T Consensus 253 Dd~~~~~~~---------------------l~~E~~~~~~~~~l~~~~l~~l~-~nsi~~sf 292 (305)
T cd00443 253 DDPGIFGTS---------------------LSEEYSLAAKTFGLTFEDLCELN-RNSVLSSF 292 (305)
T ss_pred CCCcccCCC---------------------hHHHHHHHHHHcCcCHHHHHHHH-HHHHHHhc
Confidence 987543221 222232 3456689999887765 45544433
No 140
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=96.44 E-value=0.69 Score=43.40 Aligned_cols=162 Identities=17% Similarity=0.186 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 210 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
...++++.+..++-+.|+.+|.+...+ + .+.++++.+.+. .=.+
T Consensus 151 ek~lrAaA~A~~~Tg~Pi~tHt~~gt~-------------------------------g-~eq~~il~~egv----dl~~ 194 (316)
T COG1735 151 EKSLRAAARAHKETGAPISTHTPAGTM-------------------------------G-LEQLRILAEEGV----DLRK 194 (316)
T ss_pred HHHHHHHHHHhhhcCCCeEEeccchhh-------------------------------h-HHHHHHHHHcCC----ChhH
Confidence 344666667677779999999854321 2 233334443211 1236
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCe--eEEeC
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSS 367 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~--~~lgt 367 (507)
+.+.|+...++.....+.++.+|.-+.++... .-...| +......+.+...+|.. +.++-
T Consensus 195 v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG---------------~d~y~p---d~~r~~~~~~l~~~gy~d~i~ls~ 256 (316)
T COG1735 195 VSIGHMDPNTDDVYYQKKLADRGAFLEFDRIG---------------KDKYYP---DEDRIAPLLELVARGYADLILLSH 256 (316)
T ss_pred eeEeccCCCCChHHHHHHHHhcCceEEecccC---------------ccccCc---HHHhhhhHHHHHHhhHhhheeccc
Confidence 88999984448888899999989877655321 111111 33344555666666643 44552
Q ss_pred CCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 368 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 368 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
|........... ...... +-.+....+......+++.|++-+.+=++.--||++.|..
T Consensus 257 d~~~~~~~~~~~---~~~~~~-~~~g~~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 257 DDICLSDDVFLK---SMLKAN-GGWGYGYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred chhhhhhhHHHH---hhhhhc-CCcccchhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 322221111100 000111 1122222234445567788999777777888899999864
No 141
>PTZ00124 adenosine deaminase; Provisional
Probab=96.27 E-value=0.44 Score=47.02 Aligned_cols=140 Identities=15% Similarity=0.105 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceE
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL 290 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 290 (507)
..+..+++.|++.|.++.+|+.+... +. ....+...+..+. ..
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~------------------------~~--~~~~v~~ai~~l~---~~-------- 248 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVT------------------------LP--NLNTLYSAIQVLK---VK-------- 248 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCC------------------------CC--cchhHHHHHHHhC---CC--------
Confidence 45788899999999999999943210 00 0011222222221 11
Q ss_pred EEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCC
Q 010547 291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS 370 (507)
Q Consensus 291 ~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~ 370 (507)
.+.|........++++.++++++++. +||..-... ...+ ....-++.++++.|++++++||..
T Consensus 249 RIGHG~~~~~d~~l~~~l~~~~I~lE--vCPtSN~~~-----------~~v~----~~~~HPi~~l~~~Gv~v~InTDDp 311 (362)
T PTZ00124 249 RIGHGIRVAESQELIDMVKEKDILLE--VCPISNVLL-----------NNAK----SMDTHPIRKLYDAGVKVSVNSDDP 311 (362)
T ss_pred ccccccccCCCHHHHHHHHHcCCeEE--ECCcchhhh-----------hcCC----chhhHHHHHHHHCCCcEEEeCCCc
Confidence 13333322133567888888887654 477421111 0011 112346788999999999999987
Q ss_pred CCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHH
Q 010547 371 PTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKL 426 (507)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~ 426 (507)
+..... +...+.. ....|++.++..+++. |+.++
T Consensus 312 ~~~~t~---------------------l~~Ey~~~~~~~gls~~~l~~l~~-nai~a 346 (362)
T PTZ00124 312 GMFLTN---------------------INDDYEELYTHLNFTLADFMKMNE-WALEK 346 (362)
T ss_pred cccCCC---------------------hhHHHHHHHHHcCCCHHHHHHHHH-HHHHH
Confidence 543211 3333333 3567999999988744 55444
No 142
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=96.22 E-value=0.22 Score=48.93 Aligned_cols=147 Identities=15% Similarity=0.072 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHhcC--CcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCC
Q 010547 209 NASHIKEGLSVLARYK--RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~--~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (507)
+...+..+++.|++.| .++.+|+.+... +.......+.+.+.+.. ++
T Consensus 177 ~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~------------------------~~~~~~~~v~~al~lg~----~R--- 225 (345)
T cd01321 177 PLLDFLPQLLWFPKQCAEIPFFFHAGETNG------------------------DGTETDENLVDALLLNT----KR--- 225 (345)
T ss_pred CHHHHHHHHHHHHHhCCCCceEeecCCCcC------------------------CCCCChhHHHHHHHhCC----Cc---
Confidence 5678888999999999 999999953220 00000123444443322 22
Q ss_pred CceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEe
Q 010547 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLS 366 (507)
Q Consensus 287 g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lg 366 (507)
+.|........++++.++++++.+. +||..-..+ ...+. ...-++.+++++|++++++
T Consensus 226 -----IGHG~~~~~dp~ll~~l~~~~I~lE--vCPtSN~~~-----------~~v~~----~~~HPl~~ll~~Gv~vtin 283 (345)
T cd01321 226 -----IGHGFALPKHPLLMDLVKKKNIAIE--VCPISNQVL-----------GLVSD----LRNHPAAALLARGVPVVIS 283 (345)
T ss_pred -----CccccccCcCHHHHHHHHHcCCeEE--ECcchhhhh-----------ccccc----hhhChHHHHHHCCCeEEEe
Confidence 2333222134567888888887654 477421111 01111 1123567889999999999
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcC---CCHHHHHHHHhhchhHHhCC
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYG---VTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~g---ls~~~al~~~T~n~A~~lgl 429 (507)
||......... +...+. .....| ++.+++.++ +.|+.++--+
T Consensus 284 TDDp~~f~t~~--------------------l~~Ey~~~~~~~g~~~l~~~~l~~l-~~nsi~~sF~ 329 (345)
T cd01321 284 SDDPGFWGAKG--------------------LSHDFYQAFMGLAPADAGLRGLKQL-AENSIRYSAL 329 (345)
T ss_pred CCCcchhCCCC--------------------chHHHHHHHHHhccCCCCHHHHHHH-HHHHHHHHCC
Confidence 99875432100 222222 334557 998887764 4566655444
No 143
>PRK08392 hypothetical protein; Provisional
Probab=95.24 E-value=2.3 Score=38.69 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=25.5
Q ss_pred eecccccCCCCCCCCCChhHHHHHHHhCCceEEE
Q 010547 101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLI 134 (507)
Q Consensus 101 ID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 134 (507)
||.|+|..... ....+....+.+.+.|++.+.
T Consensus 1 ~D~H~HT~~sd--~~~~~~e~v~~A~~~Gl~~i~ 32 (215)
T PRK08392 1 MDLHTHTVYSD--GIGSVRDNIAEAERKGLRLVG 32 (215)
T ss_pred CccccCCCCcC--CcCCHHHHHHHHHHcCCCEEE
Confidence 79999988753 334578888999999999875
No 144
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=94.91 E-value=0.31 Score=47.25 Aligned_cols=143 Identities=18% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 010547 208 TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 287 (507)
Q Consensus 208 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g 287 (507)
..++....+++.++..|..+.+||.+.. ..+.+...+....-.
T Consensus 182 ~p~~~f~~~f~~~r~~gl~lt~HaGE~~-----------------------------~~~~i~~al~~~~~~-------- 224 (345)
T COG1816 182 YPPELFVSLFKLARDNGLKLTIHAGEAG-----------------------------GPESIRDALDLLGAE-------- 224 (345)
T ss_pred CCHHHHHHHHHHHHHcCceEEEeccccC-----------------------------CcHHHHHHHHHhchh--------
Confidence 4678889999999999999999995322 222334444433311
Q ss_pred ceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeC
Q 010547 288 AHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSS 367 (507)
Q Consensus 288 ~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgt 367 (507)
.+.|..-.....++++.+.+.++++.. ||- +.+. ....+ .-..-++.+++++|+++++.|
T Consensus 225 ---rI~HGi~~~~d~~L~~~l~~~qI~lev--CP~------SNi~-----~~~v~----~~~~hPf~~~~d~Gv~VsLnT 284 (345)
T COG1816 225 ---RIGHGIRAIEDPELLYRLAERQIPLEV--CPL------SNIQ-----LGVVP----SLAKHPFKKLFDAGVKVSLNT 284 (345)
T ss_pred ---hhccccccccCHHHHHHHHHhCCeeEE--CCc------chhh-----ccccc----chhhCcHHHHHHcCCceEEcC
Confidence 133433222444788888888887655 772 1111 11111 122335789999999999999
Q ss_pred CCCCCChhhhccccCCccccCCCCchhhhHHH-HHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 368 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLP-VTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 368 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
|...+.... +. .....+...+++.+|+.+++ .|+=+.-++
T Consensus 285 Ddp~~f~~~---------------------l~~Ey~~aa~~~~l~~~dl~~~a-rnav~~af~ 325 (345)
T COG1816 285 DDPLYFGTP---------------------LIEEYLVAAQIYGLSREDLCELA-RNAVEAAFI 325 (345)
T ss_pred CChhhcCCc---------------------hHHHHHHHHHHhCCCHHHHHHHH-HHHHHHccC
Confidence 988664311 22 22223556679988887744 454444443
No 145
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=94.67 E-value=3.6 Score=38.09 Aligned_cols=63 Identities=13% Similarity=0.015 Sum_probs=44.8
Q ss_pred HHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC--CCCC
Q 010547 356 ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ--VSKG 433 (507)
Q Consensus 356 ~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl--~~~G 433 (507)
..+.|++++++||......-. .+......+...|++.+++..+.+.+|.+.+.. .+.+
T Consensus 163 ~~~~g~piiisSdAh~~~~l~--------------------~~~~~~~l~~~~Gl~~~~~~~~~~~~~~~i~~~~~~~~~ 222 (237)
T PRK00912 163 ARKYDFPLVLTSGAMSCYDLR--------------------SPREMIALAELFGMEEDEALKALSYYPESIIKKNRNRKN 222 (237)
T ss_pred HHhcCCCEEEeCCCCcccccC--------------------CHHHHHHHHHHcCCCHHHHHHHHHHhHHHHHHhhccCCC
Confidence 344599999999966332111 144456677889999999999999999999987 3344
Q ss_pred ccccC
Q 010547 434 AIAIG 438 (507)
Q Consensus 434 ~I~~G 438 (507)
.|..|
T Consensus 223 ~~~~~ 227 (237)
T PRK00912 223 YVIEG 227 (237)
T ss_pred ccccc
Confidence 45444
No 146
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=94.14 E-value=0.77 Score=44.99 Aligned_cols=156 Identities=17% Similarity=0.143 Sum_probs=78.5
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
+..|+...- ++. ...+.....+++.+++.|.++.+|+.+... ...
T Consensus 164 ~vvG~dl~g-----~E~-~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~-----------------------------~~~ 208 (331)
T PF00962_consen 164 GVVGFDLAG-----DED-GGPPLKFAPAFRKAREAGLKLTVHAGETGG-----------------------------PEH 208 (331)
T ss_dssp TEEEEEEES-----STT-STTGGGHHHHHHHHHHTT-EEEEEESSSST-----------------------------HHH
T ss_pred eEEEEEecC-----Ccc-cCchHHHHHHHhhhcccceeecceecccCC-----------------------------ccc
Confidence 677776631 111 123334888889999999999999944321 112
Q ss_pred HHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChh
Q 010547 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAA 348 (507)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 348 (507)
+...+..+. . -.+.|........++++.++++++++ ++||..-..... . ...
T Consensus 209 ~~~ai~~l~----------~-~RIgHG~~~~~~p~l~~~~~~~~I~i--EvcptSN~~~~~-~--------------~~~ 260 (331)
T PF00962_consen 209 IRDAILLLG----------A-DRIGHGVRLIKDPELLELLAERQIPI--EVCPTSNVQLGA-V--------------PSY 260 (331)
T ss_dssp HHHHHHTST------------SEEEE-GGGGGSHHHHHHHHHTT-EE--EE-HHHHHHTTS-S--------------STG
T ss_pred ccchhhhcc----------c-eeecchhhhhhhhHHHHHHHHhCCCe--eeCCCcCcccce-e--------------eec
Confidence 333333311 1 13555543324456777777887654 557743221100 0 011
Q ss_pred hHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHh
Q 010547 349 NKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLA 427 (507)
Q Consensus 349 ~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~l 427 (507)
..-++.++++.|++++++||...... .. +...+. .+...++|.++..+++ .|+.++-
T Consensus 261 ~~hP~~~~~~~gv~v~i~TDd~~~~~-------------------~~--l~~ey~~~~~~~~l~~~~l~~l~-~nsi~~s 318 (331)
T PF00962_consen 261 EEHPLRKLLDAGVPVSINTDDPGVFG-------------------TT--LSDEYYLAAEAFGLSLADLKQLA-RNSIEAS 318 (331)
T ss_dssp GG-CHHHHHHTT-EEEE--BSHHHHT--------------------S--HHHHHHHHHHHHT--HHHHHHHH-HHHHHCS
T ss_pred chhHHHHHHHcCCceeccCCCccccC-------------------CC--cHHHHHHHHHHcCCCHHHHHHHH-HHHHHHH
Confidence 12356788899999999999652211 11 333333 3456799998877754 4655544
Q ss_pred CC
Q 010547 428 GQ 429 (507)
Q Consensus 428 gl 429 (507)
.+
T Consensus 319 f~ 320 (331)
T PF00962_consen 319 FL 320 (331)
T ss_dssp SS
T ss_pred cC
Confidence 33
No 147
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=93.38 E-value=7.7 Score=37.17 Aligned_cols=173 Identities=18% Similarity=0.162 Sum_probs=95.8
Q ss_pred ccHHHHHHHHH-cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcccccc
Q 010547 177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYST 255 (507)
Q Consensus 177 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (507)
...+++++..+ .|..+++..-... ....++..+..+.+.|.++|+++.+|....... .+..
T Consensus 113 ~a~~E~er~v~~~gf~g~~l~p~~~----~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~----------~~~~---- 174 (293)
T COG2159 113 AAAEELERRVRELGFVGVKLHPVAQ----GFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGG----------AGLE---- 174 (293)
T ss_pred HHHHHHHHHHHhcCceEEEeccccc----CCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCC----------cccc----
Confidence 35567777665 5788887732211 123455668999999999999999998543220 0000
Q ss_pred ccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecC--ChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC
Q 010547 256 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS--DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333 (507)
Q Consensus 256 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~--~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~ 333 (507)
.....| ..+.+++.+ .+..++.+.|+. .. -..+.+..+.. .-++..+.+..
T Consensus 175 ~~~~~p--------~~~~~va~~------fP~l~IVl~H~G~~~p-~~~~a~~~a~~-~~nvy~d~s~~----------- 227 (293)
T COG2159 175 KGHSDP--------LYLDDVARK------FPELKIVLGHMGEDYP-WELEAIELAYA-HPNVYLDTSGV----------- 227 (293)
T ss_pred cCCCCc--------hHHHHHHHH------CCCCcEEEEecCCCCc-hhHHHHHHHHh-CCCceeeeecc-----------
Confidence 000111 233344444 347789999997 32 33344443322 22222222210
Q ss_pred CCCceeEcCCCCChhhHHHHHHHHhc--CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCC
Q 010547 334 GDTRFKCAPPIRDAANKEKLWEALMD--GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVT 411 (507)
Q Consensus 334 ~~~~~~~~p~~~~~~~~~~~~~~l~~--G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls 411 (507)
..+..+ . .+.+.+.+ .-++.+|||+....... -.......+++
T Consensus 228 ---~~~~~~----~----~~~~~~~~~~~dkilFGSD~P~~~~~~------------------------~l~~~~~l~l~ 272 (293)
T COG2159 228 ---RPKYFA----P----PLLEFLKELGPDKILFGSDYPAIHPEV------------------------WLAELDELGLS 272 (293)
T ss_pred ---ccccCC----h----HHHHHHHhcccCeEEecCCCCCcCHHH------------------------HHHHHHhcCCC
Confidence 011111 0 23333333 24688999966444321 12234566788
Q ss_pred HHHHHHHHhhchhHHhCC
Q 010547 412 LEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 412 ~~~al~~~T~n~A~~lgl 429 (507)
.+..-+..-.|+++++|+
T Consensus 273 ~e~k~kiL~~NA~rll~l 290 (293)
T COG2159 273 EEVKEKILGENAARLLGL 290 (293)
T ss_pred HHHHHHHHHHhHHHHhCc
Confidence 888899999999999998
No 148
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=92.77 E-value=7.6 Score=40.00 Aligned_cols=55 Identities=16% Similarity=0.083 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC
Q 010547 301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (507)
Q Consensus 301 ~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~ 372 (507)
...+++.++++++.+ ++||..-.. ....+.++ .-++..++.+|++++++||..+.
T Consensus 361 ~P~l~~~vke~~I~l--EvCP~SN~~-----------l~~v~~~~----~HPl~~lla~Gvpv~InSDDP~~ 415 (479)
T TIGR01431 361 HPLVLQMLKERNIAV--EVNPISNQV-----------LQLVADLR----NHPCAYLFADNYPMVISSDDPAF 415 (479)
T ss_pred CHHHHHHHHHhCCeE--EECccchhh-----------hcccCCcc----cChHHHHHHCCCcEEEeCCCccc
Confidence 345777777887665 447732111 11111221 12467889999999999998754
No 149
>PRK08609 hypothetical protein; Provisional
Probab=92.75 E-value=9.9 Score=40.23 Aligned_cols=35 Identities=17% Similarity=0.022 Sum_probs=26.6
Q ss_pred eecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCC
Q 010547 101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 101 ID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~ 137 (507)
+|.|+|..... ....+...++.+.+.|++.+.-..
T Consensus 336 ~DlH~HT~~sD--g~~sleemv~~A~~~Gl~~i~iTd 370 (570)
T PRK08609 336 GDLHMHTTWSD--GAFSIEEMVEACIAKGYEYMAITD 370 (570)
T ss_pred CCccccCCCCC--CCCCHHHHHHHHHHCCCCEEEEeC
Confidence 39999997552 234577888899999999988553
No 150
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=92.51 E-value=9.3 Score=35.81 Aligned_cols=152 Identities=18% Similarity=0.145 Sum_probs=78.4
Q ss_pred ecceeecccccCCCCCC--CC----------CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh-cCce-
Q 010547 97 MPGLIDVHAHLDDPGRT--EW----------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-KRIY- 162 (507)
Q Consensus 97 ~PGfID~H~H~~~~~~~--~~----------~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~- 162 (507)
...+||+|.|+...... .| -.+......+-.+|+-..+-.- ++-...+.+...+..+... ....
T Consensus 6 ~~~~IDtH~Hl~~~~~~~~pw~~~~~~~~~d~~~~dY~~~~~~~gv~~~V~vq--~~~~~~D~~~e~~~v~~~~~~~g~~ 83 (279)
T COG3618 6 PQMIIDTHAHLWDPGALPYPWLADYEALRRDYLFEDYLALLKAHGVSGGVLVQ--VNVDPRDNEKELAFVAELAERHGGI 83 (279)
T ss_pred cccccchhhhhhcccccCCCCCCcccccCCCCCHHHHHHHHHhcCcceeEEEe--cccCccchHHHHHHHHhhHHhhCce
Confidence 56789999999765211 11 1133344555678888766442 1222223333333333333 2222
Q ss_pred eeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhh
Q 010547 163 VDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVK 242 (507)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 242 (507)
+.+ +....++..+.+++....-..|+...+ .. ...+....+.+++.++..+++|..+..+...
T Consensus 84 vg~-----id~~~~e~~a~L~~~~~~~~~GvR~~l-~~--~p~~~~~a~~~r~~~~rL~~~gl~fdl~~~~--------- 146 (279)
T COG3618 84 VGV-----IDECRPEFAAKLERARYPFFRGVRRNL-HV--VPDGLFEAPAWRANVERLAKLGLHFDLQVDP--------- 146 (279)
T ss_pred EEE-----EecCCchHHHHHHHhcccccceeeehh-hc--CCccchhhHHHHHHHHHHHhcCCeEEEEeCh---------
Confidence 111 111222222333333211144554422 10 1112234478999999999999999988732
Q ss_pred cccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC
Q 010547 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 297 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~ 297 (507)
.++...+.+..+ .++.++.+.|+..
T Consensus 147 ------------------------~ql~~~i~l~~~------~Pd~~~VldH~G~ 171 (279)
T COG3618 147 ------------------------HQLPDLIPLALK------APDVNFVLDHCGR 171 (279)
T ss_pred ------------------------hhhHHHHHHHhh------CCCCCEEeccCCC
Confidence 234455555554 3477899999974
No 151
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=87.32 E-value=1.3 Score=39.21 Aligned_cols=38 Identities=24% Similarity=0.402 Sum_probs=28.4
Q ss_pred eeecccccCCC---CCCCCCChhHHHHHHHhCCceEEEeCC
Q 010547 100 LIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 100 fID~H~H~~~~---~~~~~~~~~~~~~~~l~~GvTt~~~~~ 137 (507)
+||.|+|.-.. +..+.+.....++.+.+.|||+++..+
T Consensus 1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaTs 41 (254)
T COG4464 1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVATS 41 (254)
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeecc
Confidence 59999999654 333444455667888999999999765
No 152
>PRK07945 hypothetical protein; Provisional
Probab=86.07 E-value=36 Score=33.34 Aligned_cols=35 Identities=23% Similarity=0.036 Sum_probs=27.7
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeC
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 136 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~ 136 (507)
.+|.|+|..... ....+....+.+.+.|++.+.-.
T Consensus 97 ~~D~H~HT~~Sd--g~~~~ee~v~~Ai~~Gl~~i~~T 131 (335)
T PRK07945 97 RGDLHTHSDWSD--GGSPIEEMARTAAALGHEYCALT 131 (335)
T ss_pred hhhcccccCCCC--CCCCHHHHHHHHHHCCCCEEEEe
Confidence 479999998763 34568888999999999987643
No 153
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=85.55 E-value=21 Score=35.25 Aligned_cols=108 Identities=17% Similarity=0.120 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCc
Q 010547 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~ 288 (507)
+.......+..+.+.|+...+|+.+... ....+..+++++.-.
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE~~~----------------------------~~~~v~~~LD~l~~~--------- 267 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGETNG----------------------------GASVVKNALDLLGTE--------- 267 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccccCC----------------------------ChHHHHHHHHhhCCc---------
Confidence 3445555556666689999999954311 122344555533321
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCC
Q 010547 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSD 368 (507)
Q Consensus 289 ~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD 368 (507)
.+.|...-.....++..++.+++.+. +||..-. ..... .++ ..-++.+.+++|+++.++||
T Consensus 268 --RIGHG~~l~~dp~L~~~~k~~nI~lE--iCP~SN~-----vl~~v------~d~----rnhp~~~~~~~~vP~vI~sD 328 (399)
T KOG1097|consen 268 --RIGHGYFLTKDPELINLLKSRNIALE--ICPISNQ-----VLGLV------SDL----RNHPVARLLAAGVPVVINSD 328 (399)
T ss_pred --cccCceeccCCHHHHHHHHhcCceEE--Eccchhh-----heecc------ccc----cccHHHHHHhCCCCEEEeCC
Confidence 12332211123367777777776654 4773211 11111 111 12256778889999999999
Q ss_pred CCCC
Q 010547 369 HSPT 372 (507)
Q Consensus 369 ~~~~ 372 (507)
...+
T Consensus 329 DP~~ 332 (399)
T KOG1097|consen 329 DPGF 332 (399)
T ss_pred Cccc
Confidence 7754
No 154
>PRK06361 hypothetical protein; Provisional
Probab=84.93 E-value=6.8 Score=35.46 Aligned_cols=96 Identities=14% Similarity=0.021 Sum_probs=59.0
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCC
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH 369 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~ 369 (507)
-.+.|... -..+.++.+++.++.+.....+.. .......+..+.+.|++++++||.
T Consensus 115 dvlaHpd~--~~~~~~~~~~~~~~~lEin~~~~~----------------------~~~~~~~l~~a~~~gi~vv~~SDa 170 (212)
T PRK06361 115 DILAHPGL--ITEEEAELAAENGVFLEITARKGH----------------------SLTNGHVARIAREAGAPLVINTDT 170 (212)
T ss_pred cEecCcch--hhHHHHHHHHHcCeEEEEECCCCc----------------------ccchHHHHHHHHHhCCcEEEECCC
Confidence 45666654 334567777788766554321100 001112223334459999999997
Q ss_pred CCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 370 SPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
...... . .+..+.......|++.++++.+.+.||+++|++
T Consensus 171 H~~~d~-------------------~-~~~~~~~i~~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 171 HAPSDL-------------------I-TYEFARKVALGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred CCHHHH-------------------H-HHHHHHHHHcCCCCCHHHHHHHHHHhHHHHHHh
Confidence 622110 0 134455567788999999999999999999874
No 155
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=71.67 E-value=95 Score=29.62 Aligned_cols=130 Identities=17% Similarity=0.243 Sum_probs=65.9
Q ss_pred CEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC
Q 010547 94 AVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP 173 (507)
Q Consensus 94 ~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (507)
..--|.++|.|.|....... .........+...|+.-++..+ + .......+.+..+.-.+..+.-++.+.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~--~d~s~v~~~a~~~~v~~~~v~g--t--~~~d~~~~~~l~~~y~~~v~~t~G~HP~~~~ 85 (296)
T KOG3020|consen 12 NFTNPMLEDIYCHIQAHPSD--SDASQVLERAVQAGVSKLIVTG--T--SLKDSKEALELAEKYPGSVYPTFGVHPHFSQ 85 (296)
T ss_pred hhcchhhchhhhccccCCCC--ccchHHHHHHHhccceEEEEeC--C--CcchHHHHHHHHhhCCCceeeccCcCCCccc
Confidence 34567899999998875433 2233456677889999998774 2 1122222222222111222222222221211
Q ss_pred CCc------ccHHHHHHHHHcC----CcEEEEcccCCCCCCCC--CCC----HHHHHHHHHHHHhcCCcEEEecCC
Q 010547 174 ENA------YNASALEALLNAG----VLGLKSFMCPSGINDFP--MTN----ASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 174 ~~~------~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~--~~~----~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
.-. ...+.+..+...+ ...++.. |-+..+ ..+ ...+++-+++|.+.+.|+.+|+.+
T Consensus 86 ~~~~~~~~~~~~~~L~~~~~~~~~~k~vAiGEc----GLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~ 157 (296)
T KOG3020|consen 86 EFSDQSRKEKFLDTLLSIIENGFLPKVVAIGEC----GLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRS 157 (296)
T ss_pred chhhccchhhHHHHHHHHHhhcccCCeEEeecc----ccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechh
Confidence 111 2345555555442 1222221 111111 122 234778899999999999999954
No 156
>PRK09248 putative hydrolase; Validated
Probab=70.39 E-value=91 Score=28.87 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=28.0
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeC
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 136 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~ 136 (507)
++|.|+|...... ....+....+.+.+.|++++.-.
T Consensus 4 ~~D~H~HT~~s~~-~~~~~~e~v~~A~~~G~~~i~iT 39 (246)
T PRK09248 4 PVDTHTHTIASGH-AYSTLHENAAEAKQKGLKLFAIT 39 (246)
T ss_pred ceEeCcCCCCCCC-CCCCHHHHHHHHHHCCCCEEEEC
Confidence 6899999877532 33458888999999999998754
No 157
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=68.68 E-value=71 Score=33.11 Aligned_cols=108 Identities=9% Similarity=0.046 Sum_probs=63.4
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-Ccee--eEEEeccccCCCcccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYV--DVGFWGGLVPENAYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 194 (507)
+..-.+.+.++|+..++-+- .......+....+.+.. +... .++.........+...+..+++.+.|+..+.
T Consensus 99 v~~fv~~a~~~Gidi~RIfd-----~lndv~nl~~ai~~vk~ag~~~~~~i~yt~sp~~t~e~~~~~a~~l~~~Gad~I~ 173 (499)
T PRK12330 99 VDRFVEKSAENGMDVFRVFD-----ALNDPRNLEHAMKAVKKVGKHAQGTICYTVSPIHTVEGFVEQAKRLLDMGADSIC 173 (499)
T ss_pred HHHHHHHHHHcCCCEEEEEe-----cCChHHHHHHHHHHHHHhCCeEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44556788899999987652 12334555555555542 2222 2221111111111233455667778887775
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCCccc
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEKG 236 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---~~~v~~H~~~~~~ 236 (507)
.- +.....++.....+++..++. +.++.+|+++...
T Consensus 174 Ik------DtaGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~G 212 (499)
T PRK12330 174 IK------DMAALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTG 212 (499)
T ss_pred eC------CCccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCC
Confidence 42 333468899999988887765 6899999987554
No 158
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=58.62 E-value=1.5e+02 Score=31.54 Aligned_cols=106 Identities=13% Similarity=0.088 Sum_probs=62.4
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccCCCcc----cHHHHHHHHHcCCcE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVPENAY----NASALEALLNAGVLG 192 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~ 192 (507)
++...+.+.++|+..++.+- ..-....+....+.+.. +.......- ....+.. ..+..+++.+.|+..
T Consensus 98 v~~~v~~a~~~Gidv~Rifd-----~lnd~~n~~~~i~~~k~~G~~~~~~i~--yt~sp~~t~e~~~~~ak~l~~~Gad~ 170 (596)
T PRK14042 98 VRAFVKLAVNNGVDVFRVFD-----ALNDARNLKVAIDAIKSHKKHAQGAIC--YTTSPVHTLDNFLELGKKLAEMGCDS 170 (596)
T ss_pred HHHHHHHHHHcCCCEEEEcc-----cCcchHHHHHHHHHHHHcCCEEEEEEE--ecCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 44567788999999998662 23334444444444442 222222211 1112222 234456667788876
Q ss_pred EEEcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 193 LKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
+..- +.....++....++++..++ .++++.+|+++...
T Consensus 171 I~Ik------DtaG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~G 209 (596)
T PRK14042 171 IAIK------DMAGLLTPTVTVELYAGLKQATGLPVHLHSHSTSG 209 (596)
T ss_pred EEeC------CcccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCC
Confidence 6542 23346788888888877765 47999999886554
No 159
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=56.89 E-value=1.3e+02 Score=28.77 Aligned_cols=109 Identities=12% Similarity=0.066 Sum_probs=60.6
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH----HHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+.+++.|+..++..+.......-+.+.-.+ ..+...++..+-++ ......+..+..+...+.|
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~g----v~~~t~~~i~~a~~a~~~G 94 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAG----AGYGTATAIAYAQAAEKAG 94 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEe----cCCCHHHHHHHHHHHHHhC
Confidence 445577788889999999998775222222222332222 33333333332222 2223344566677777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ +.++..+.++.+..
T Consensus 95 ad~v~~~p-----P~y~~~~~~~i~~~f~~v~~~~~~pi~lYn 132 (289)
T cd00951 95 ADGILLLP-----PYLTEAPQEGLYAHVEAVCKSTDLGVIVYN 132 (289)
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHhcCCCCEEEEe
Confidence 98886632 112234566665554 55566678887765
No 160
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=52.53 E-value=87 Score=25.57 Aligned_cols=67 Identities=13% Similarity=0.115 Sum_probs=44.2
Q ss_pred CCcEEecCCCEEecceeecccccCCCCCCC-----------CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHH
Q 010547 85 TGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-----------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK 153 (507)
Q Consensus 85 ~~~viD~~g~~v~PGfID~H~H~~~~~~~~-----------~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~ 153 (507)
.+-++|+. .+|+|-+||.|.|...-+... -+++..........|||.+...- .+..+...+.
T Consensus 6 ~~~~fdld-ytiwP~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASR------t~ap~iA~q~ 78 (144)
T KOG4549|consen 6 EAMQFDLD-YTIWPRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASR------TMAPQIASQG 78 (144)
T ss_pred ceeEEecc-ceeeeEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecC------CCCHHHHHHH
Confidence 45667754 689999999999986432211 12345556667789999998542 3456666666
Q ss_pred HHHHh
Q 010547 154 VDAAE 158 (507)
Q Consensus 154 ~~~~~ 158 (507)
++...
T Consensus 79 L~~fk 83 (144)
T KOG4549|consen 79 LETFK 83 (144)
T ss_pred HHHhc
Confidence 66554
No 161
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=52.07 E-value=2.9e+02 Score=28.50 Aligned_cols=106 Identities=15% Similarity=0.123 Sum_probs=64.5
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC-ceeeEEEeccccCCCcc----cHHHHHHHHHcCCcE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFWGGLVPENAY----NASALEALLNAGVLG 192 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~ 192 (507)
++...+.+.++|+..++.+- .....+.+....+.+... .......- ....+.. ..+..+++.+.|+..
T Consensus 107 v~~fv~~a~~~Gidi~Rifd-----~lnd~~n~~~ai~~ak~~G~~~~~~i~--yt~sp~~t~~y~~~~a~~l~~~Gad~ 179 (468)
T PRK12581 107 VDKFISLSAQNGIDVFRIFD-----ALNDPRNIQQALRAVKKTGKEAQLCIA--YTTSPVHTLNYYLSLVKELVEMGADS 179 (468)
T ss_pred HHHHHHHHHHCCCCEEEEcc-----cCCCHHHHHHHHHHHHHcCCEEEEEEE--EEeCCcCcHHHHHHHHHHHHHcCCCE
Confidence 44457778899999998662 233455555555555532 22222221 1112222 335566777788877
Q ss_pred EEEcccCCCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEecCCccc
Q 010547 193 LKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKG 236 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~~~~ 236 (507)
+..- +.....+|.....+++..++. +.++.+|+++...
T Consensus 180 I~Ik------DtaG~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~G 218 (468)
T PRK12581 180 ICIK------DMAGILTPKAAKELVSGIKAMTNLPLIVHTHATSG 218 (468)
T ss_pred EEEC------CCCCCcCHHHHHHHHHHHHhccCCeEEEEeCCCCc
Confidence 6552 333467888888888877764 6889999886554
No 162
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=51.61 E-value=2.6e+02 Score=28.00 Aligned_cols=106 Identities=17% Similarity=0.130 Sum_probs=63.7
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccCCCcc----cHHHHHHHHHcCCcE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVPENAY----NASALEALLNAGVLG 192 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~ 192 (507)
++.....+.++|++.++.+ ...-+...++...+++.. +........ ....+.+ ..+..+++.+.|+.+
T Consensus 100 Ve~Fv~ka~~nGidvfRiF-----DAlND~RNl~~ai~a~kk~G~h~q~~i~--YT~sPvHt~e~yv~~akel~~~g~DS 172 (472)
T COG5016 100 VEKFVEKAAENGIDVFRIF-----DALNDVRNLKTAIKAAKKHGAHVQGTIS--YTTSPVHTLEYYVELAKELLEMGVDS 172 (472)
T ss_pred HHHHHHHHHhcCCcEEEec-----hhccchhHHHHHHHHHHhcCceeEEEEE--eccCCcccHHHHHHHHHHHHHcCCCE
Confidence 4455677889999999865 223345555555555543 223332221 1222222 345566777788876
Q ss_pred EEEcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 193 LKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
+-.- +-....++...+++++..++ .++++..|++....
T Consensus 173 IciK------DmaGlltP~~ayelVk~iK~~~~~pv~lHtH~TsG 211 (472)
T COG5016 173 ICIK------DMAGLLTPYEAYELVKAIKKELPVPVELHTHATSG 211 (472)
T ss_pred EEee------cccccCChHHHHHHHHHHHHhcCCeeEEecccccc
Confidence 6442 11235788888888877776 58999999876443
No 163
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=50.97 E-value=2e+02 Score=27.72 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=60.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHH----HHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKV----DAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+.++.+||..++..+........+.+.-.+.. +...++..+-++ ......+..+..+...+.|
T Consensus 26 D~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~g----v~~~t~~~i~~~~~a~~~G 101 (303)
T PRK03620 26 DEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAG----AGGGTAQAIEYAQAAERAG 101 (303)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEe----cCCCHHHHHHHHHHHHHhC
Confidence 44557777888899999999877522222223333333333 333333332222 2223334566667777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+...+ ..++..+.++.+..
T Consensus 102 adav~~~p-----P~y~~~~~~~i~~~f~~va~~~~lpi~lYn 139 (303)
T PRK03620 102 ADGILLLP-----PYLTEAPQEGLAAHVEAVCKSTDLGVIVYN 139 (303)
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 98886532 112234566666654 45566678887764
No 164
>COG1242 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=49.73 E-value=2.3e+02 Score=26.77 Aligned_cols=60 Identities=15% Similarity=0.184 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCc
Q 010547 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (507)
Q Consensus 209 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~ 288 (507)
+......++..++++|+.|..|.=. +.|...-.+.++.+..++. .+ ..|+
T Consensus 166 d~~~y~dav~r~rkrgIkvc~HiI~-------------------------GLPgE~~~~mleTak~v~~-~~----v~GI 215 (312)
T COG1242 166 DFACYVDAVKRLRKRGIKVCTHLIN-------------------------GLPGETRDEMLETAKIVAE-LG----VDGI 215 (312)
T ss_pred chHHHHHHHHHHHHcCCeEEEEEee-------------------------CCCCCCHHHHHHHHHHHHh-cC----CceE
Confidence 4567788889999999999999721 2333333334444333322 21 2388
Q ss_pred eEEEEecCCh
Q 010547 289 HLHIVHLSDA 298 (507)
Q Consensus 289 ~~~~~h~~~~ 298 (507)
++|.-|+-..
T Consensus 216 KlH~Lhvvkg 225 (312)
T COG1242 216 KLHPLHVVKG 225 (312)
T ss_pred EEEEEEEecC
Confidence 9999999765
No 165
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=49.52 E-value=21 Score=22.31 Aligned_cols=18 Identities=28% Similarity=0.503 Sum_probs=14.5
Q ss_pred eeeEEEeCCEEEEeecCC
Q 010547 60 SGAVEIKEGNIISIVSEE 77 (507)
Q Consensus 60 ~~~I~I~dG~I~~Vg~~~ 77 (507)
.-.|.|+||+|++|.+..
T Consensus 17 sV~iiiqdG~vvQIe~~E 34 (38)
T PF10055_consen 17 SVTIIIQDGRVVQIEKTE 34 (38)
T ss_pred eEEEEEECCEEEEEEhhh
Confidence 446789999999998764
No 166
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=48.55 E-value=23 Score=30.45 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=25.7
Q ss_pred eecccccCCCCCCCCCChhHHHHHHHhCCceEEEe
Q 010547 101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 101 ID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
||.|+|...........+......+.+.|++++.-
T Consensus 1 iDlH~HT~~s~~dg~~~~~e~v~~A~~~Gl~~i~i 35 (175)
T PF02811_consen 1 IDLHVHTKYSILDGKDSPEEYVEQAKEKGLDAIAI 35 (175)
T ss_dssp EEEEB--TTTSSTSSSSHHHHHHHHHHTTESEEEE
T ss_pred CCccccccCcchhhcCCHHHHHHHHHHcCCCEEEE
Confidence 79999998763344456888899999999998764
No 167
>PLN02417 dihydrodipicolinate synthase
Probab=47.26 E-value=2.2e+02 Score=26.94 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=59.5
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHH----HhcCceeeEEEeccccC-CCcccHHHHHHHHHc
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA----AEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (507)
+++.+....+..+..|+..++..+.......-+.+.-.+..+. ..++..+- .+... ...+..+..+...+.
T Consensus 20 D~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi----~gv~~~~t~~~i~~a~~a~~~ 95 (280)
T PLN02417 20 DLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVI----GNTGSNSTREAIHATEQGFAV 95 (280)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEE----EECCCccHHHHHHHHHHHHHc
Confidence 4455777888889999999987752222222233333333322 22222222 22222 223455666777788
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
|+.++-... +.+...+.+++.+.++...+.. ++.+..
T Consensus 96 Gadav~~~~-----P~y~~~~~~~i~~~f~~va~~~-pi~lYn 132 (280)
T PLN02417 96 GMHAALHIN-----PYYGKTSQEGLIKHFETVLDMG-PTIIYN 132 (280)
T ss_pred CCCEEEEcC-----CccCCCCHHHHHHHHHHHHhhC-CEEEEE
Confidence 988876632 1122356777777666555555 777664
No 168
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=46.25 E-value=2.3e+02 Score=27.10 Aligned_cols=110 Identities=12% Similarity=0.091 Sum_probs=60.1
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHH----HHHHhcCceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
.+.+.+....+.++.+|+..++..+.......-+.+.-.+. .+...++..+-++. + ....+..+..+...+.
T Consensus 23 iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv--~--~~t~~ai~~a~~a~~~ 98 (296)
T TIGR03249 23 FDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGV--G--GNTSDAIEIARLAEKA 98 (296)
T ss_pred cCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEec--C--ccHHHHHHHHHHHHHh
Confidence 34455778888899999999987752222222333333333 33333333332222 2 2234455667777788
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
|+.++-... + . +...+.+.+.+.+ +.+...+.++.+..
T Consensus 99 Gadav~~~p-P---~-y~~~s~~~i~~~f~~v~~a~~~pvilYn 137 (296)
T TIGR03249 99 GADGYLLLP-P---Y-LINGEQEGLYAHVEAVCESTDLGVIVYQ 137 (296)
T ss_pred CCCEEEECC-C---C-CCCCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 998885532 1 1 2224556655544 44555677777654
No 169
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=45.33 E-value=2.2e+02 Score=30.34 Aligned_cols=61 Identities=18% Similarity=0.124 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 350 KEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 350 ~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
.-++.++++.|+.++++||........+ ..+...+. .+...+++.+++.++ ..|+.++-+
T Consensus 503 ~HP~~~~~~~Gl~VSLsTDDPl~f~~T~------------------epL~EEY~~aa~~~~Ls~~Dl~eL-arNSV~~S~ 563 (611)
T TIGR01429 503 KNPLPEYLHKGLNVSLSTDDPLQFHYTK------------------EALMEEYAIAAQVWKLSTCDMCEL-ARNSVLQSG 563 (611)
T ss_pred hChHHHHHHCCCeEEEcCCCchhhCCCC------------------CcHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHhC
Confidence 3457788999999999999774321110 00222233 344568999887775 457777777
Q ss_pred C
Q 010547 429 Q 429 (507)
Q Consensus 429 l 429 (507)
+
T Consensus 564 ~ 564 (611)
T TIGR01429 564 F 564 (611)
T ss_pred C
Confidence 6
No 170
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=44.56 E-value=2.8e+02 Score=26.25 Aligned_cols=111 Identities=13% Similarity=0.049 Sum_probs=60.4
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecccc-CCCcccHHHHHHHHHcCCc
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAGVL 191 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 191 (507)
.+.+.+....+.++..|+..++..+.......-+.+.-.+..+....... .+. .+.. ....+..+..+...+.|+.
T Consensus 17 iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~-~vi--~gvg~~~~~~ai~~a~~a~~~Gad 93 (279)
T cd00953 17 IDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITD-KVI--FQVGSLNLEESIELARAAKSFGIY 93 (279)
T ss_pred cCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcC-CEE--EEeCcCCHHHHHHHHHHHHHcCCC
Confidence 34456777788889999999988752222222333333333322221110 121 1122 2223455666777778998
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
++-... + ...+..+.+.+.+-++...+ +.++.+..
T Consensus 94 ~v~v~~-P---~y~~~~~~~~i~~yf~~v~~-~lpv~iYn 128 (279)
T cd00953 94 AIASLP-P---YYFPGIPEEWLIKYFTDISS-PYPTFIYN 128 (279)
T ss_pred EEEEeC-C---cCCCCCCHHHHHHHHHHHHh-cCCEEEEe
Confidence 886532 1 12222456777776666555 88888874
No 171
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=43.58 E-value=2.8e+02 Score=25.92 Aligned_cols=52 Identities=13% Similarity=0.058 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
..+....+.|..++..++..+.....+..+++.+.++.+.++++++.+.+|.
T Consensus 14 ~~~~~~~~~G~~~vel~~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~ls~h~ 65 (273)
T smart00518 14 KAFIEAVDIGARSFQLFLGNPRSWKGVRLSEETAEKFKEALKENNIDVSVHA 65 (273)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 5677888889999988765443222235788889999999999999999997
No 172
>PRK15108 biotin synthase; Provisional
Probab=42.38 E-value=3.3e+02 Score=26.77 Aligned_cols=112 Identities=15% Similarity=0.054 Sum_probs=68.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEE
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGL 193 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 193 (507)
+.+.+...++.+.+.|++.+.....+..|.....+.+....+.+... .+.+....+ .-..+.++++.++|+..+
T Consensus 77 s~eEI~~~a~~~~~~G~~~i~i~~~g~~p~~~~~e~i~~~i~~ik~~-~i~v~~s~G-----~ls~e~l~~LkeAGld~~ 150 (345)
T PRK15108 77 EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM-GLETCMTLG-----TLSESQAQRLANAGLDYY 150 (345)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCcchHHHHHHHHHHHHhC-CCEEEEeCC-----cCCHHHHHHHHHcCCCEE
Confidence 33556677777788999998653312345444556666666666532 222222111 223678899999999887
Q ss_pred EEcccCC--CCCCC-CCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 194 KSFMCPS--GINDF-PMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 194 ~~~~~~~--~~~~~-~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
...+..+ ..... +..+.+...+.++.+++.|+.+.+|.
T Consensus 151 n~~leT~p~~f~~I~~~~~~~~rl~~i~~a~~~G~~v~sg~ 191 (345)
T PRK15108 151 NHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGG 191 (345)
T ss_pred eeccccChHhcCCCCCCCCHHHHHHHHHHHHHcCCceeeEE
Confidence 7654331 11111 23467788888899999999888774
No 173
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=41.76 E-value=1.6e+02 Score=30.57 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 351 EKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 351 ~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
-++.+.++.|++++|+||........+ ..+...+. .+...++|.+++.+ +..|+.++-++
T Consensus 392 HP~~~~l~~Gl~VsInTDDPl~f~~t~------------------~~L~eEY~~a~~~~~Ls~~Dl~e-LarNSV~~Sf~ 452 (496)
T cd01319 392 NPFPEFFKRGLNVSLSTDDPLQFHFTK------------------EPLMEEYSIAAQVWKLSTCDMCE-LARNSVLQSGF 452 (496)
T ss_pred ChHHHHHHCCCeEEEeCCCchhhCCCC------------------CcHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHhCC
Confidence 357788999999999999774321110 00222233 33456899888766 45677777666
No 174
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=41.05 E-value=3.7e+02 Score=27.55 Aligned_cols=108 Identities=16% Similarity=0.093 Sum_probs=61.6
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccCC-C-cccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVPE-N-AYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g~~~~~ 194 (507)
...-.+.+.++|+..+.-+- +. .....+....+.+.. +..+.+.......+. . +...+..+++.+.|+..+.
T Consensus 98 v~~~v~~A~~~Gvd~irif~----~l-nd~~n~~~~v~~ak~~G~~v~~~i~~t~~p~~~~~~~~~~a~~l~~~Gad~I~ 172 (448)
T PRK12331 98 VESFVQKSVENGIDIIRIFD----AL-NDVRNLETAVKATKKAGGHAQVAISYTTSPVHTIDYFVKLAKEMQEMGADSIC 172 (448)
T ss_pred HHHHHHHHHHCCCCEEEEEE----ec-CcHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 34456778899999877653 11 122344445554443 223333222112111 1 1233556677778887765
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
.- +.....+|.....+++..++ .+.++.+|+++...
T Consensus 173 i~------Dt~G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~G 209 (448)
T PRK12331 173 IK------DMAGILTPYVAYELVKRIKEAVTVPLEVHTHATSG 209 (448)
T ss_pred Ec------CCCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 42 33346788888888877765 47899999986554
No 175
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=40.16 E-value=4.8e+02 Score=27.85 Aligned_cols=108 Identities=18% Similarity=0.136 Sum_probs=62.9
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccC--CCcccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVP--ENAYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~ 194 (507)
+..-.+.++++|+..+.-+- +. .....+....+.+.. +..+.........+ ..+...+..+++.+.|+..+.
T Consensus 93 v~~~v~~a~~~Gvd~irif~----~l-nd~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~~~~~~~~~~~~~~~~Gad~I~ 167 (582)
T TIGR01108 93 VERFVKKAVENGMDVFRIFD----AL-NDPRNLQAAIQAAKKHGAHAQGTISYTTSPVHTLETYLDLAEELLEMGVDSIC 167 (582)
T ss_pred HHHHHHHHHHCCCCEEEEEE----ec-CcHHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44456778999999877652 11 223445555555543 33333332111221 112234556677778887765
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
. . +.....++..+.++++..++ .+.++.+|+++...
T Consensus 168 i-~-----Dt~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~G 204 (582)
T TIGR01108 168 I-K-----DMAGILTPKAAYELVSALKKRFGLPVHLHSHATTG 204 (582)
T ss_pred E-C-----CCCCCcCHHHHHHHHHHHHHhCCCceEEEecCCCC
Confidence 4 2 23346788888888877765 47899999887554
No 176
>PRK01060 endonuclease IV; Provisional
Probab=38.43 E-value=3.4e+02 Score=25.45 Aligned_cols=54 Identities=17% Similarity=0.103 Sum_probs=40.0
Q ss_pred cHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCc---EEEec
Q 010547 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP---LLVHA 231 (507)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~---v~~H~ 231 (507)
..+.++.+.+.|..++..+...+.....+..+++.+.++.+.++++|+. +..|.
T Consensus 14 ~~~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~ 70 (281)
T PRK01060 14 LEGAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHA 70 (281)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEec
Confidence 3456677778999999987654332223346888899999999999998 78886
No 177
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=37.66 E-value=76 Score=23.45 Aligned_cols=19 Identities=21% Similarity=0.085 Sum_probs=10.8
Q ss_pred chhhhhhHHHHHHHHHHhh
Q 010547 6 LQWRLLPTLTLLAASLFLL 24 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~ 24 (507)
|.+|+++|..+.......|
T Consensus 1 MaRRlwiLslLAVtLtVAL 19 (100)
T PF05984_consen 1 MARRLWILSLLAVTLTVAL 19 (100)
T ss_pred CchhhHHHHHHHHHHHHHh
Confidence 5677777665554433344
No 178
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=36.87 E-value=3.1e+02 Score=26.49 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=60.0
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH----HHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+......++..||..++..+.......-+.+.-.. ..+...++..+-++. ......+..+..+...+.|
T Consensus 27 D~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv---~~~~t~~ai~~a~~A~~~G 103 (309)
T cd00952 27 DLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVGA---TTLNTRDTIARTRALLDLG 103 (309)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEe---ccCCHHHHHHHHHHHHHhC
Confidence 345567778888999999998775212222222333333 333333333322221 1123345566677777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhc-CCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARY-KRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~-~~~v~~H~ 231 (507)
+.++-.... ... ..+.+.+.+.+ ..++.. +.++.+..
T Consensus 104 ad~vlv~~P----~y~-~~~~~~l~~yf~~va~a~~~lPv~iYn 142 (309)
T cd00952 104 ADGTMLGRP----MWL-PLDVDTAVQFYRDVAEAVPEMAIAIYA 142 (309)
T ss_pred CCEEEECCC----cCC-CCCHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 988866321 122 23556665554 445556 58888764
No 179
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=36.81 E-value=2.8e+02 Score=26.22 Aligned_cols=113 Identities=11% Similarity=0.107 Sum_probs=59.6
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcCCcE
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLG 192 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 192 (507)
+.+.+....+.++..|+..+...+.......-+.+...+..+.+.....-++....+... ...+..+..+...+.|+.+
T Consensus 19 D~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~~~~a~~a~~~G~d~ 98 (284)
T cd00950 19 DFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNNTAEAIELTKRAEKAGADA 98 (284)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhCCCCcEEeccCCccHHHHHHHHHHHHHcCCCE
Confidence 345567778888999999998775211222233333333333222111101112222322 2334556667777889888
Q ss_pred EEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 193 LKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+-... +.....+++++.+.. +.++..+.++.++.
T Consensus 99 v~~~~-----P~~~~~~~~~l~~~~~~ia~~~~~pi~lYn 133 (284)
T cd00950 99 ALVVT-----PYYNKPSQEGLYAHFKAIAEATDLPVILYN 133 (284)
T ss_pred EEEcc-----cccCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 86632 111223556555544 45565688888875
No 180
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=36.56 E-value=2.5e+02 Score=26.27 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=40.0
Q ss_pred cHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CCHHH---HHHHHHHHHhc-CCcEEEecCCcccchhhhhc
Q 010547 178 NASALEALLNAGVLGLKSFMCPSGINDFPM-TNASH---IKEGLSVLARY-KRPLLVHAEMEKGSERHVKL 243 (507)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~---l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~ 243 (507)
..+..+++.+.|+.-+..-.. +..++... ...++ +..+++.+++. +.++.+|...+..++.+++.
T Consensus 25 ~~~~a~~~~~~GA~iIDIG~~-st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~al~~ 94 (257)
T TIGR01496 25 AVAHAERMLEEGADIIDVGGE-STRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARAALEA 94 (257)
T ss_pred HHHHHHHHHHCCCCEEEECCC-CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHc
Confidence 445566777888887776211 11122222 23335 67777888776 99999999777666555543
No 181
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=36.28 E-value=4.2e+02 Score=25.93 Aligned_cols=103 Identities=8% Similarity=-0.019 Sum_probs=59.0
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc-eeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccC
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 199 (507)
..+.+..+|+..++-.. .....+...+..+.+...+ .+.+..........+...+..+.+.+.|+..+.. .
T Consensus 93 dl~~a~~~gvd~iri~~-----~~~e~~~~~~~i~~ak~~G~~v~~~l~~a~~~~~e~l~~~a~~~~~~Ga~~i~i--~- 164 (337)
T PRK08195 93 DLKMAYDAGVRVVRVAT-----HCTEADVSEQHIGLARELGMDTVGFLMMSHMAPPEKLAEQAKLMESYGAQCVYV--V- 164 (337)
T ss_pred HHHHHHHcCCCEEEEEE-----ecchHHHHHHHHHHHHHCCCeEEEEEEeccCCCHHHHHHHHHHHHhCCCCEEEe--C-
Confidence 35677889999877442 1223344555555555433 2222222211111122234445556678876643 2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCCc
Q 010547 200 SGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEME 234 (507)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~a~~~---~~~v~~H~~~~ 234 (507)
+.....+|+.+.+.+...++. +.++.+|+++.
T Consensus 165 ---DT~G~~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnn 199 (337)
T PRK08195 165 ---DSAGALLPEDVRDRVRALRAALKPDTQVGFHGHNN 199 (337)
T ss_pred ---CCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 233468899999998888764 68999998764
No 182
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=35.38 E-value=5.9e+02 Score=27.28 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=60.8
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc-eeeEEEeccccCC-C-cccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGLVPE-N-AYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g~~~~~ 194 (507)
+....+.+.++|+..+.-+- .......+....+.+...+ ...........+. . ....+..+++.+.|+..+.
T Consensus 99 v~~~v~~a~~~Gid~~rifd-----~lnd~~~~~~ai~~ak~~G~~~~~~i~yt~~p~~~~~~~~~~a~~l~~~Gad~i~ 173 (593)
T PRK14040 99 VERFVERAVKNGMDVFRVFD-----AMNDPRNLETALKAVRKVGAHAQGTLSYTTSPVHTLQTWVDLAKQLEDMGVDSLC 173 (593)
T ss_pred HHHHHHHHHhcCCCEEEEee-----eCCcHHHHHHHHHHHHHcCCeEEEEEEEeeCCccCHHHHHHHHHHHHHcCCCEEE
Confidence 34446778899999988652 1222344555555554322 2211111101111 1 1233445566678887665
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
.- +.....++..+.++++..++ .+.++.+|+++...
T Consensus 174 i~------Dt~G~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~G 210 (593)
T PRK14040 174 IK------DMAGLLKPYAAYELVSRIKKRVDVPLHLHCHATTG 210 (593)
T ss_pred EC------CCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCc
Confidence 42 22346788888888877665 47899999887554
No 183
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=35.26 E-value=2.5e+02 Score=26.62 Aligned_cols=110 Identities=12% Similarity=0.081 Sum_probs=59.7
Q ss_pred CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHH----HHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCC
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 190 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (507)
.+.+....+..+.+|+..++..+.......-+.+.-.+. .+...++..+-.+. ......+..+..+...+.|+
T Consensus 21 ~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~gv---~~~st~~~i~~a~~a~~~Ga 97 (289)
T PF00701_consen 21 EDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAGV---GANSTEEAIELARHAQDAGA 97 (289)
T ss_dssp HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEEE---ESSSHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEecC---cchhHHHHHHHHHHHhhcCc
Confidence 344667788889999999998752222222223333332 33333343333322 11233345666777778899
Q ss_pred cEEEEcccCCCCCCCCCCCHHHHHH-HHHHHHhcCCcEEEecC
Q 010547 191 LGLKSFMCPSGINDFPMTNASHIKE-GLSVLARYKRPLLVHAE 232 (507)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~a~~~~~~v~~H~~ 232 (507)
.++-... +.+...+.+.+.+ ..+.++.-+.++.++..
T Consensus 98 d~v~v~~-----P~~~~~s~~~l~~y~~~ia~~~~~pi~iYn~ 135 (289)
T PF00701_consen 98 DAVLVIP-----PYYFKPSQEELIDYFRAIADATDLPIIIYNN 135 (289)
T ss_dssp SEEEEEE-----STSSSCCHHHHHHHHHHHHHHSSSEEEEEEB
T ss_pred eEEEEec-----cccccchhhHHHHHHHHHHhhcCCCEEEEEC
Confidence 8886532 1122345555555 44566666889888763
No 184
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=34.76 E-value=3.9e+02 Score=25.09 Aligned_cols=104 Identities=13% Similarity=-0.047 Sum_probs=60.1
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC-ceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccC
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 199 (507)
....+..+|+..+.-.. + ....+......+.+... ..+.+.....+....+...+.++.+.+.|+..+..-
T Consensus 87 ~l~~a~~~gv~~iri~~----~-~~~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~~~~~~~~~~~~~~g~~~i~l~--- 158 (266)
T cd07944 87 LLEPASGSVVDMIRVAF----H-KHEFDEALPLIKAIKEKGYEVFFNLMAISGYSDEELLELLELVNEIKPDVFYIV--- 158 (266)
T ss_pred HHHHHhcCCcCEEEEec----c-cccHHHHHHHHHHHHHCCCeEEEEEEeecCCCHHHHHHHHHHHHhCCCCEEEEe---
Confidence 34556778888766442 1 23455555555555433 233333322222222233445556667788776542
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhc-C--CcEEEecCCcc
Q 010547 200 SGINDFPMTNASHIKEGLSVLARY-K--RPLLVHAEMEK 235 (507)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~a~~~-~--~~v~~H~~~~~ 235 (507)
+.....+|+.+.++++..++. + .++.+|+++..
T Consensus 159 ---DT~G~~~P~~v~~lv~~l~~~~~~~~~i~~H~Hn~~ 194 (266)
T cd07944 159 ---DSFGSMYPEDIKRIISLLRSNLDKDIKLGFHAHNNL 194 (266)
T ss_pred ---cCCCCCCHHHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 333468899999998887764 4 88999997644
No 185
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=34.44 E-value=6.1e+02 Score=27.17 Aligned_cols=108 Identities=15% Similarity=0.088 Sum_probs=62.8
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccC--CCcccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVP--ENAYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~ 194 (507)
+....+.+.++|+..+.-+- + ......+....+.+.. +..+....-....+ ..+...+..+++.+.|+..+.
T Consensus 98 v~~~v~~A~~~Gvd~irif~----~-lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~t~~~~~~~a~~l~~~Gad~I~ 172 (592)
T PRK09282 98 VEKFVEKAAENGIDIFRIFD----A-LNDVRNMEVAIKAAKKAGAHVQGTISYTTSPVHTIEKYVELAKELEEMGCDSIC 172 (592)
T ss_pred hHHHHHHHHHCCCCEEEEEE----e-cChHHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44556788899999887653 1 1223444444444442 23333222111111 112334556677778887765
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
. . +.....++..+.++++..++ .+.++.+|+++...
T Consensus 173 i-~-----Dt~G~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~G 209 (592)
T PRK09282 173 I-K-----DMAGLLTPYAAYELVKALKEEVDLPVQLHSHCTSG 209 (592)
T ss_pred E-C-----CcCCCcCHHHHHHHHHHHHHhCCCeEEEEEcCCCC
Confidence 4 2 22346788888888877765 47899999887554
No 186
>PRK06740 histidinol-phosphatase; Validated
Probab=32.81 E-value=4.8e+02 Score=25.49 Aligned_cols=18 Identities=28% Similarity=-0.029 Sum_probs=13.7
Q ss_pred HHHHHhcCCeeEEeCCCC
Q 010547 353 LWEALMDGHIDMLSSDHS 370 (507)
Q Consensus 353 ~~~~l~~G~~~~lgtD~~ 370 (507)
+..+.+.|+++++|||+.
T Consensus 277 l~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 277 LQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHCCCeEEEeeCCC
Confidence 344555699999999965
No 187
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=32.27 E-value=4.1e+02 Score=24.49 Aligned_cols=34 Identities=21% Similarity=0.049 Sum_probs=25.0
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEe
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
.+|.|+|.... .. ..+....++.+...|...+.-
T Consensus 2 ~~D~H~HT~~s-dg-~~~~~e~~~~A~~~g~~~~~i 35 (237)
T COG1387 2 KIDLHTHTVFS-DG-EATPEEMVEAAIELGLEYIAI 35 (237)
T ss_pred CcccccCcccc-cC-CCCHHHHHHHHHHcCCeEEEE
Confidence 47999999886 33 234556688899999998764
No 188
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=32.16 E-value=1.7e+02 Score=27.63 Aligned_cols=109 Identities=21% Similarity=0.099 Sum_probs=59.7
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCCC----------CCCCHHHHHHHHHHHhcCceeeEEEeccccC------CCcccHH
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSDP----------STISTETLKLKVDAAEKRIYVDVGFWGGLVP------ENAYNAS 180 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~p----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 180 (507)
....-...|.++|+-.++.-. +-.. .......+.+..+.+..+. +.+..+..... -..+..+
T Consensus 33 ~~k~yIDfAa~~G~eYvlvD~-GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~Kg-Vgi~lw~~~~~~~~~~~~~~~~~~ 110 (273)
T PF10566_consen 33 TQKRYIDFAAEMGIEYVLVDA-GWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKG-VGIWLWYHSETGGNVANLEKQLDE 110 (273)
T ss_dssp HHHHHHHHHHHTT-SEEEEBT-TCCGS--TTT--TT-B-TT--HHHHHHHHHHTT--EEEEEEECCHTTBHHHHHCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEecc-ccccccccccccccccCCccCHHHHHHHHHHcC-CCEEEEEeCCcchhhHhHHHHHHH
Confidence 345556788999999877522 1110 0112345555555555442 22322222222 1112356
Q ss_pred HHHHHHHcCCcEEEE-cccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 010547 181 ALEALLNAGVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (507)
Q Consensus 181 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 232 (507)
.+..+.+-|+.|+|. |+.. .........+.+++.|.++++.|..|-.
T Consensus 111 ~f~~~~~~Gv~GvKidF~~~-----d~Q~~v~~y~~i~~~AA~~~LmvnfHg~ 158 (273)
T PF10566_consen 111 AFKLYAKWGVKGVKIDFMDR-----DDQEMVNWYEDILEDAAEYKLMVNFHGA 158 (273)
T ss_dssp HHHHHHHCTEEEEEEE--SS-----TSHHHHHHHHHHHHHHHHTT-EEEETTS
T ss_pred HHHHHHHcCCCEEeeCcCCC-----CCHHHHHHHHHHHHHHHHcCcEEEecCC
Confidence 677788899999998 3321 1123345678899999999999999963
No 189
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=32.03 E-value=5.9e+02 Score=26.30 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=62.2
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccCC-C-cccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVPE-N-AYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g~~~~~ 194 (507)
+....+.++++|+..+.-+- + ......+....+.+.. +..+.......+.+. . +...+..+++.+.|+..+.
T Consensus 97 v~~fv~~A~~~Gvd~irif~----~-lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~t~e~~~~~a~~l~~~Gad~I~ 171 (467)
T PRK14041 97 VELFVKKVAEYGLDIIRIFD----A-LNDIRNLEKSIEVAKKHGAHVQGAISYTVSPVHTLEYYLEFARELVDMGVDSIC 171 (467)
T ss_pred hHHHHHHHHHCCcCEEEEEE----e-CCHHHHHHHHHHHHHHCCCEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44446788999999887653 1 1224455555555542 223332221112111 1 1233455666778887765
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
.- +.....+|....++++..++ .++++.+|+++...
T Consensus 172 i~------Dt~G~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~G 208 (467)
T PRK14041 172 IK------DMAGLLTPKRAYELVKALKKKFGVPVEVHSHCTTG 208 (467)
T ss_pred EC------CccCCcCHHHHHHHHHHHHHhcCCceEEEecCCCC
Confidence 42 23346788888888877665 47899999886554
No 190
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=31.88 E-value=4.4e+02 Score=24.78 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=59.9
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHH----hcCceeeEEEeccccC-CCcccHHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA----EKRIYVDVGFWGGLVP-ENAYNASALEALLN 187 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 187 (507)
.+++.+....+.++..|+..+...+.......-+.+.-.+..+.. .++..+- .+... ...+..+..+...+
T Consensus 15 iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi----~gv~~~~~~~~i~~a~~a~~ 90 (281)
T cd00408 15 VDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVI----AGVGANSTREAIELARHAEE 90 (281)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEE----EecCCccHHHHHHHHHHHHH
Confidence 344567788888999999999877522222223333333333322 2222222 22222 22234555666677
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
.|+.++-... +.+...+++.+.+.+ +.++..+.++.++.
T Consensus 91 ~Gad~v~v~p-----P~y~~~~~~~~~~~~~~ia~~~~~pi~iYn 130 (281)
T cd00408 91 AGADGVLVVP-----PYYNKPSQEGIVAHFKAVADASDLPVILYN 130 (281)
T ss_pred cCCCEEEECC-----CcCCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8998886632 112224566655544 55555688988875
No 191
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=31.81 E-value=4.5e+02 Score=24.93 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=58.9
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH----HHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHc
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (507)
+.+.+....+.++..|+..+...+.......-+.+.-.+ ..+...++..+- .+... ...+..+..+...+.
T Consensus 20 D~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~~~~~vi----~gv~~~~~~~~i~~a~~a~~~ 95 (292)
T PRK03170 20 DFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVNGRVPVI----AGTGSNSTAEAIELTKFAEKA 95 (292)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhCCCCcEE----eecCCchHHHHHHHHHHHHHc
Confidence 345577788889999999988664222222222333222 233333332222 22222 233455666777778
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
|+.++-... +.....+.+.+.+.+ +.++..+.++.+..
T Consensus 96 G~d~v~~~p-----P~~~~~~~~~i~~~~~~ia~~~~~pv~lYn 134 (292)
T PRK03170 96 GADGALVVT-----PYYNKPTQEGLYQHFKAIAEATDLPIILYN 134 (292)
T ss_pred CCCEEEECC-----CcCCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 998886632 111223556655544 45666678888774
No 192
>COG4939 Major membrane immunogen, membrane-anchored lipoprotein [Function unknown]
Probab=31.70 E-value=1.6e+02 Score=23.93 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=14.8
Q ss_pred Cce-eeeEEEeCCEEEEeecC
Q 010547 57 GVI-SGAVEIKEGNIISIVSE 76 (507)
Q Consensus 57 ~~~-~~~I~I~dG~I~~Vg~~ 76 (507)
++. .-.|.|+||+|+++.-.
T Consensus 45 gwk~f~~iti~dGKiv~~~yd 65 (147)
T COG4939 45 GWKAFVTITIQDGKIVACTYD 65 (147)
T ss_pred CccceEEEEEeCCEEEEEEee
Confidence 343 45688999999998643
No 193
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=31.41 E-value=4.7e+02 Score=24.93 Aligned_cols=109 Identities=14% Similarity=0.103 Sum_probs=59.8
Q ss_pred CCCChhHHHHHHHh-CCceEEEeCCCCCCCCCCCHHHHHHH----HHHHhcCceeeEEEecccc-CCCcccHHHHHHHHH
Q 010547 114 EWEGFPSGTKAAAA-GGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLV-PENAYNASALEALLN 187 (507)
Q Consensus 114 ~~~~~~~~~~~~l~-~GvTt~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 187 (507)
+.+.+....+.++. .|+..+...+.......-+.+.-... .+...++..+- .+.. ....+..+..+...+
T Consensus 22 D~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~vi----agvg~~~t~~ai~~a~~a~~ 97 (293)
T PRK04147 22 DEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLI----AQVGSVNTAEAQELAKYATE 97 (293)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEE----ecCCCCCHHHHHHHHHHHHH
Confidence 44557777888888 99999987752222222333333333 33333332222 1222 223345566677778
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHH-HHHHHHhcCCcEEEec
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKE-GLSVLARYKRPLLVHA 231 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~a~~~~~~v~~H~ 231 (507)
.|+.++-.... ...+ .+.+.+.+ ..+.++..+.++.+..
T Consensus 98 ~Gad~v~v~~P----~y~~-~~~~~l~~~f~~va~a~~lPv~iYn 137 (293)
T PRK04147 98 LGYDAISAVTP----FYYP-FSFEEICDYYREIIDSADNPMIVYN 137 (293)
T ss_pred cCCCEEEEeCC----cCCC-CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 89988876431 1222 34455554 4455666788888875
No 194
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=30.84 E-value=4.5e+02 Score=24.56 Aligned_cols=105 Identities=13% Similarity=0.046 Sum_probs=58.5
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC-ceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEccc
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMC 198 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 198 (507)
.....++++|+..+.-.. + ......+....+.+... ..+.+..............+.++.+.+.|+..+.. .
T Consensus 89 ~~i~~a~~~g~~~iri~~----~-~s~~~~~~~~i~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~G~d~i~l-~- 161 (263)
T cd07943 89 DDLKMAADLGVDVVRVAT----H-CTEADVSEQHIGAARKLGMDVVGFLMMSHMASPEELAEQAKLMESYGADCVYV-T- 161 (263)
T ss_pred HHHHHHHHcCCCEEEEEe----c-hhhHHHHHHHHHHHHHCCCeEEEEEEeccCCCHHHHHHHHHHHHHcCCCEEEE-c-
Confidence 335677788998876442 1 12233445555555433 22333332111112222334455666678876643 1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhc-CC-cEEEecCCcc
Q 010547 199 PSGINDFPMTNASHIKEGLSVLARY-KR-PLLVHAEMEK 235 (507)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~a~~~-~~-~v~~H~~~~~ 235 (507)
+.....+|+.+.++++..++. +. ++.+|+++..
T Consensus 162 ----DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hn~~ 196 (263)
T cd07943 162 ----DSAGAMLPDDVRERVRALREALDPTPVGFHGHNNL 196 (263)
T ss_pred ----CCCCCcCHHHHHHHHHHHHHhCCCceEEEEecCCc
Confidence 333468899999998887664 55 8999997643
No 195
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=30.17 E-value=2.8e+02 Score=22.03 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=20.9
Q ss_pred CCCHHHHHHHHHHHHhcCCcEEEecCCc
Q 010547 207 MTNASHIKEGLSVLARYKRPLLVHAEME 234 (507)
Q Consensus 207 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 234 (507)
..+.+.+.++.+...+...||.+||...
T Consensus 69 ~~~~~~v~~f~~~l~~~~~Pvl~hC~sG 96 (110)
T PF04273_consen 69 AITEEDVEAFADALESLPKPVLAHCRSG 96 (110)
T ss_dssp T--HHHHHHHHHHHHTTTTSEEEE-SCS
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 3678888888888888889999999654
No 196
>PLN03055 AMP deaminase; Provisional
Probab=27.78 E-value=2.3e+02 Score=30.15 Aligned_cols=61 Identities=15% Similarity=0.098 Sum_probs=39.5
Q ss_pred HHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 350 KEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 350 ~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
..++.++++.|+.++|+||........+ +. +...+. .+...+++..+..+ +..|+.++-+
T Consensus 481 ~HP~~~~~~~Gl~VSInTDDPl~f~tT~-----------------ep-L~eEY~~aa~~~~LS~~DL~e-LarNSV~~Sf 541 (602)
T PLN03055 481 RNPFPMFFARGLNVSLSTDDPLQIHLTK-----------------EP-LVEEYSIAAQVWKLSSCDLCE-IARNSVLQSG 541 (602)
T ss_pred hChHHHHHHCCCEEEEcCCCcchhcCCC-----------------Cc-HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHhc
Confidence 4467889999999999999775422110 00 222222 34456899888866 4567777777
Q ss_pred C
Q 010547 429 Q 429 (507)
Q Consensus 429 l 429 (507)
+
T Consensus 542 ~ 542 (602)
T PLN03055 542 F 542 (602)
T ss_pred C
Confidence 6
No 197
>PRK06256 biotin synthase; Validated
Probab=27.76 E-value=4.6e+02 Score=25.50 Aligned_cols=112 Identities=14% Similarity=0.081 Sum_probs=62.9
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEE
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGL 193 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 193 (507)
+.+.+...++.+.+.|++.+.....+..|.....+.+....+.+.....+.+....+. -..+.++.+.++|...+
T Consensus 92 s~eeI~~~~~~~~~~g~~~~~l~~~g~~p~~~~~~~~~e~i~~i~~~~~i~~~~~~g~-----l~~e~l~~LkeaG~~~v 166 (336)
T PRK06256 92 DIEELIEAAKEAIEEGAGTFCIVASGRGPSGKEVDQVVEAVKAIKEETDLEICACLGL-----LTEEQAERLKEAGVDRY 166 (336)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEecCCCCCchHHHHHHHHHHHHHhcCCCcEEecCCc-----CCHHHHHHHHHhCCCEE
Confidence 3445666677777889876654321223332223445555555544333344333222 34567788888898777
Q ss_pred EEcccCCCC---CC-CCCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 194 KSFMCPSGI---ND-FPMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 194 ~~~~~~~~~---~~-~~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
...+.. .. .. .+..+.+...+.++.+++.|+.+.++.
T Consensus 167 ~~~lEt-s~~~~~~i~~~~t~~~~i~~i~~a~~~Gi~v~~~~ 207 (336)
T PRK06256 167 NHNLET-SRSYFPNVVTTHTYEDRIDTCEMVKAAGIEPCSGG 207 (336)
T ss_pred ecCCcc-CHHHHhhcCCCCCHHHHHHHHHHHHHcCCeeccCe
Confidence 543221 11 00 123467888889999999998776653
No 198
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=27.37 E-value=78 Score=22.23 Aligned_cols=33 Identities=21% Similarity=0.095 Sum_probs=24.4
Q ss_pred ecccccCCCCCCCCCChhHHHHHHHhCCceEEE
Q 010547 102 DVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLI 134 (507)
Q Consensus 102 D~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 134 (507)
|.|+|................+.+.+.|...+.
T Consensus 1 dlH~Ht~~S~~~~~~~~~~~~~~a~~~g~~~v~ 33 (67)
T smart00481 1 DLHVHSDYSLLDGALSPEELVKRAKELGLKAIA 33 (67)
T ss_pred CCccccCCccccccCCHHHHHHHHHHcCCCEEE
Confidence 678888765434445577888888999998876
No 199
>COG2131 ComEB Deoxycytidylate deaminase [Nucleotide transport and metabolism]
Probab=27.35 E-value=83 Score=27.04 Aligned_cols=23 Identities=30% Similarity=0.294 Sum_probs=19.4
Q ss_pred eeeeEEEeCCEEEEeecCCCCCC
Q 010547 59 ISGAVEIKEGNIISIVSEEDWPR 81 (507)
Q Consensus 59 ~~~~I~I~dG~I~~Vg~~~~~~~ 81 (507)
.-|++.++|++|+++|-+..+..
T Consensus 29 ~VGAvIvkd~rIiatGYNG~p~g 51 (164)
T COG2131 29 QVGAVIVKDGRIIATGYNGAPSG 51 (164)
T ss_pred ceeEEEEeCCeEEEeecCCCCcc
Confidence 46889999999999999887654
No 200
>PF09890 DUF2117: Uncharacterized protein conserved in archaea (DUF2117); InterPro: IPR012032 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.60 E-value=87 Score=28.18 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=36.8
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeeccc
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~ 105 (507)
-++.||.|+--..-.+..|+.+||+|++|.-..-..-..+---.+|+...+|=-|.+==|.
T Consensus 104 ~I~VNGiVIG~A~s~~V~lvae~G~i~~I~Gg~iK~hGvEKL~~vDL~~A~iKTG~lRr~~ 164 (215)
T PF09890_consen 104 NIFVNGIVIGRATSSEVTLVAENGKIVDIIGGEIKEHGVEKLGKVDLEKAWIKTGLLRRSP 164 (215)
T ss_pred CEEEeeEEEEEEcCCeEEEEEeCCEEEEEECeEechhhhhhccCCChhheEEeccccccCC
Confidence 3566777775443346678889999999974332111001122478888888777655544
No 201
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=25.98 E-value=8.3e+02 Score=28.64 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=61.9
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEE--eccccC--CCcc----cHHHHHHHHHcC
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGF--WGGLVP--ENAY----NASALEALLNAG 189 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~--~~~~----~~~~~~~~~~~g 189 (507)
+...+.+.++|+..++-+ ...-+.+.+....+++.. +..+.... -+.+.+ .+.. ..+..+++.+.|
T Consensus 628 ~~f~~~~~~~Gidifrif-----D~lN~~~n~~~~~~~~~~~g~~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~G 702 (1143)
T TIGR01235 628 KYFVKQAAQGGIDIFRVF-----DSLNWVENMRVGMDAVAEAGKVVEAAICYTGDILDPARPKYDLKYYTNLAVELEKAG 702 (1143)
T ss_pred HHHHHHHHHcCCCEEEEC-----ccCcCHHHHHHHHHHHHHcCCEEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHcC
Confidence 344567789999999866 222334455555554442 22332222 111111 1111 234566777788
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
+..+..- +-....++.....+++..++ .+.++.+|+++...
T Consensus 703 ad~I~ik------Dt~Gll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt~G 744 (1143)
T TIGR01235 703 AHILGIK------DMAGLLKPAAAKLLIKALREKTDLPIHFHTHDTSG 744 (1143)
T ss_pred CCEEEEC------CCcCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 8766542 23346788888888877665 48999999987654
No 202
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=25.61 E-value=4.1e+02 Score=25.58 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=33.1
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecC
Q 010547 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (507)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---~~~v~~H~~ 232 (507)
+.++.+.+.|+.++-.. + +..+.+..+.++-.++++.+.+. ++++.+|+.
T Consensus 33 ~lv~~li~~Gv~Gi~v~-G--stGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~ 85 (309)
T cd00952 33 RLVERLIAAGVDGILTM-G--TFGECATLTWEEKQAFVATVVETVAGRVPVFVGAT 85 (309)
T ss_pred HHHHHHHHcCCCEEEEC-c--ccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 45566677888887542 2 22455678888888877766543 477888874
No 203
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=25.58 E-value=6.6e+02 Score=24.76 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=66.2
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccC
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 199 (507)
.......+.|.--++... |.....+.+....+........|+++. .....+..+.|+..+.. +
T Consensus 46 ~Qi~~L~~aGceiVRvav----~~~~~a~al~~I~~~~~iPlvADIHFd----------~~lAl~a~~~G~~~iRI---N 108 (360)
T PRK00366 46 AQIKRLARAGCEIVRVAV----PDMEAAAALPEIKKQLPVPLVADIHFD----------YRLALAAAEAGADALRI---N 108 (360)
T ss_pred HHHHHHHHcCCCEEEEcc----CCHHHHHhHHHHHHcCCCCEEEecCCC----------HHHHHHHHHhCCCEEEE---C
Confidence 345566789999999554 665666666666665544444454442 34445566788888876 1
Q ss_pred CCCCCCCCCC-HHHHHHHHHHHHhcCCcEEEecCCcccchh
Q 010547 200 SGINDFPMTN-ASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (507)
Q Consensus 200 ~~~~~~~~~~-~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 239 (507)
++. .-+ ++.+.++++.|++++.++-+-....+....
T Consensus 109 ---PGN-ig~~~~~v~~vv~~ak~~~ipIRIGvN~GSL~~~ 145 (360)
T PRK00366 109 ---PGN-IGKRDERVREVVEAAKDYGIPIRIGVNAGSLEKD 145 (360)
T ss_pred ---CCC-CCchHHHHHHHHHHHHHCCCCEEEecCCccChHH
Confidence 111 244 789999999999999999998766555333
No 204
>PRK08444 hypothetical protein; Provisional
Probab=25.56 E-value=3.8e+02 Score=26.47 Aligned_cols=113 Identities=12% Similarity=-0.007 Sum_probs=64.9
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcC-ceeeEEEecccc------CCCcccHHHHHHHH
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFWGGLV------PENAYNASALEALL 186 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~ 186 (507)
+.+.+...++.+.+.|+|.+.-.. +..|.. ..+.+....+.+... ..+.+..+.... ..+-...+.+..+.
T Consensus 81 s~eeI~~~a~~a~~~G~~ei~iv~-G~~p~~-~~e~y~e~ir~Ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~Lk 158 (353)
T PRK08444 81 SHEEILEIVKNSVKRGIKEVHIVS-AHNPNY-GYEWYLEIFKKIKEAYPNLHVKAMTAAEVDFLSRKFGKSYEEVLEDML 158 (353)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEec-cCCCCC-CHHHHHHHHHHHHHHCCCceEeeCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 345567778888899999998775 444543 456666666666543 234444321111 12223456678888
Q ss_pred HcCCcEEEE----cccCCCCCC-CC-CCCHHHHHHHHHHHHhcCCcEE
Q 010547 187 NAGVLGLKS----FMCPSGIND-FP-MTNASHIKEGLSVLARYKRPLL 228 (507)
Q Consensus 187 ~~g~~~~~~----~~~~~~~~~-~~-~~~~~~l~~~~~~a~~~~~~v~ 228 (507)
++|...+-. ++...-... .| ..+.+....+.+.|++.|+++.
T Consensus 159 eAGl~~~~g~~aEi~~~~vr~~I~p~k~~~~~~~~i~~~a~~~Gi~~~ 206 (353)
T PRK08444 159 EYGVDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKMSN 206 (353)
T ss_pred HhCcccCCCCCchhcCHHHHhhhCCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 887754421 000000000 12 2456788888899999998864
No 205
>PF05862 IceA2: Helicobacter pylori IceA2 protein; InterPro: IPR008655 This family consists of several Helicobacter pylori specific IceA2 proteins. The function of this family is unknown.
Probab=24.63 E-value=1.7e+02 Score=19.87 Aligned_cols=9 Identities=22% Similarity=0.390 Sum_probs=4.1
Q ss_pred EeCCEEEEe
Q 010547 65 IKEGNIISI 73 (507)
Q Consensus 65 I~dG~I~~V 73 (507)
|.||||.+-
T Consensus 7 vvnGki~ey 15 (59)
T PF05862_consen 7 VVNGKIEEY 15 (59)
T ss_pred EeccEEEEe
Confidence 344444444
No 206
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=24.45 E-value=4.2e+02 Score=26.32 Aligned_cols=107 Identities=10% Similarity=0.072 Sum_probs=67.7
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcE
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLG 192 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (507)
.+.+.+...++.+.+.|++.+.-.. +..|.....+.+....+.+.... ..+.... .+-..+.++.+.++|+..
T Consensus 104 ls~eEI~~~a~~~~~~Gv~~i~lvg-Ge~p~~~~~e~l~~~i~~Ik~~~-p~i~i~~-----g~lt~e~l~~Lk~aGv~r 176 (371)
T PRK09240 104 LDEEEIEREMAAIKKLGFEHILLLT-GEHEAKVGVDYIRRALPIAREYF-SSVSIEV-----QPLSEEEYAELVELGLDG 176 (371)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEee-CCCCCCCCHHHHHHHHHHHHHhC-CCceecc-----CCCCHHHHHHHHHcCCCE
Confidence 3445566777778889999987654 44555556677777766665321 1111111 223567788999999998
Q ss_pred EEEcccCCCCC---C----CCCCCHHHHHHHHHHHHhcCCc
Q 010547 193 LKSFMCPSGIN---D----FPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 193 ~~~~~~~~~~~---~----~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
+...+...... . -+..+.+...+.++.|++.|+.
T Consensus 177 ~~i~lET~~~~~~~~i~~~g~~h~~~~rl~~i~~a~~aG~~ 217 (371)
T PRK09240 177 VTVYQETYNPATYAKHHLRGPKRDFEYRLETPERAGRAGIR 217 (371)
T ss_pred EEEEEecCCHHHHHHhCcCCCCCCHHHHHHHHHHHHHcCCC
Confidence 88765332111 0 1234678888889999999885
No 207
>PRK03906 mannonate dehydratase; Provisional
Probab=24.12 E-value=3e+02 Score=27.52 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCcc
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEMEK 235 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~~~ 235 (507)
+.+.+++..|++.|+.+.+|..++.
T Consensus 214 ~fL~~v~p~Aee~GV~LaihPdDPp 238 (385)
T PRK03906 214 YFLKAIIPVAEEVGVKMAIHPDDPP 238 (385)
T ss_pred HHHHHHHHHHHHcCCEEEEeeCCcc
Confidence 3368889999999999999996543
No 208
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. Members of this protein family are 4-hydroxy-2-oxovalerate aldolase, also called 4-hydroxy-2-ketovalerate aldolase and 2-oxo-4-hydroxypentanoate aldolase. This enzyme, part of the pathway for the meta-cleavage of catechol, produces pyruvate and acetaldehyde. Acetaldehyde is then converted by acetaldehyde dehydrogenase (acylating) (DmpF; EC 1.2.1.10) to acetyl-CoA. The two enzymes are tightly associated.
Probab=24.08 E-value=6.8e+02 Score=24.45 Aligned_cols=102 Identities=12% Similarity=-0.003 Sum_probs=58.3
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCce-eeEEEeccccCCCcc-cHHHHHHHHHcCCcEEEEccc
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWGGLVPENAY-NASALEALLNAGVLGLKSFMC 198 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~ 198 (507)
..+.+..+|+..+.-.. .....+...+..+.+...+. +.+..... ....++ ..+..+.+.+.|+..+.. .
T Consensus 92 dl~~a~~~gvd~iri~~-----~~~e~d~~~~~i~~ak~~G~~v~~~l~~s-~~~~~e~l~~~a~~~~~~Ga~~i~i--~ 163 (333)
T TIGR03217 92 DLKAAYDAGARTVRVAT-----HCTEADVSEQHIGMARELGMDTVGFLMMS-HMTPPEKLAEQAKLMESYGADCVYI--V 163 (333)
T ss_pred HHHHHHHCCCCEEEEEe-----ccchHHHHHHHHHHHHHcCCeEEEEEEcc-cCCCHHHHHHHHHHHHhcCCCEEEE--c
Confidence 35777888999887542 12333445555555554332 22222221 122222 233445555678876633 2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhc-C--CcEEEecCCc
Q 010547 199 PSGINDFPMTNASHIKEGLSVLARY-K--RPLLVHAEME 234 (507)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~a~~~-~--~~v~~H~~~~ 234 (507)
+.....+|+++.+.+...++. + .++.+|+++.
T Consensus 164 ----DT~G~~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnn 198 (333)
T TIGR03217 164 ----DSAGAMLPDDVRDRVRALKAVLKPETQVGFHAHHN 198 (333)
T ss_pred ----cCCCCCCHHHHHHHHHHHHHhCCCCceEEEEeCCC
Confidence 233468889999888887764 4 7899998764
No 209
>TIGR03221 muco_delta muconolactone delta-isomerase. Members of this protein family are muconolactone delta-isomerase (EC 5.3.3.4), the CatC protein of the ortho cleavage pathway for metabolizing aromatic compounds by way of catechol.
Probab=24.05 E-value=44 Score=25.46 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHhhchhHHhCCCCCCccc-----cCCCCcEEEEcCCCceEeC
Q 010547 409 GVTLEQLASWWSERPAKLAGQVSKGAIA-----IGNHADLVVWEPEAEFELD 455 (507)
Q Consensus 409 gls~~~al~~~T~n~A~~lgl~~~G~I~-----~G~~ADlvvld~~~~~~~~ 455 (507)
+++++++-+.-..-.|++..+-+.|.+. +|.+|++-|||-++...+.
T Consensus 13 ~~~~~~~~~i~a~Eka~a~eLq~~Gk~~~lWRv~G~~~n~sifdv~s~~eLh 64 (90)
T TIGR03221 13 DMPAEKAAAIKAREKAYAQELQREGKWRHLWRVAGEYANYSIFDVESNDELH 64 (90)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCceEEEEEecCCceeEEEEEcCCHHHHH
Confidence 4566666666666666666553345443 9999999999988765543
No 210
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=23.51 E-value=3.7e+02 Score=24.00 Aligned_cols=105 Identities=13% Similarity=0.034 Sum_probs=56.9
Q ss_pred CCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC---cccHHHHHHHHHc
Q 010547 112 RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---AYNASALEALLNA 188 (507)
Q Consensus 112 ~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 188 (507)
..+.+++....+.+.++|+..++..+ ..+....+..... .+.+....++.... .....++++..+.
T Consensus 13 ~~t~~~i~~~~~~a~~~~~~av~v~p----------~~v~~~~~~l~~~-~~~v~~~~~fp~g~~~~~~k~~eve~A~~~ 81 (203)
T cd00959 13 DATEEDIRKLCDEAKEYGFAAVCVNP----------CFVPLAREALKGS-GVKVCTVIGFPLGATTTEVKVAEAREAIAD 81 (203)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcH----------HHHHHHHHHcCCC-CcEEEEEEecCCCCCcHHHHHHHHHHHHHc
Confidence 44556678888999999999988443 2223333333322 23333323232222 2345668888899
Q ss_pred CCcEEEEcccCCCC-CCCCCCCHHHHHHHHHHHHhcCCcEEE
Q 010547 189 GVLGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLV 229 (507)
Q Consensus 189 g~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~~~~v~~ 229 (507)
|+..+...+..... .+......+++.++.+.++ ++++-+
T Consensus 82 GAdevdvv~~~g~~~~~~~~~~~~ei~~v~~~~~--g~~lkv 121 (203)
T cd00959 82 GADEIDMVINIGALKSGDYEAVYEEIAAVVEACG--GAPLKV 121 (203)
T ss_pred CCCEEEEeecHHHHhCCCHHHHHHHHHHHHHhcC--CCeEEE
Confidence 99999886543210 1111123345566666554 555544
No 211
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=22.99 E-value=4e+02 Score=25.02 Aligned_cols=108 Identities=10% Similarity=0.082 Sum_probs=60.2
Q ss_pred CCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCcee--eEEEeccccCCC--cccHHHHHHHHH
Q 010547 112 RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYV--DVGFWGGLVPEN--AYNASALEALLN 187 (507)
Q Consensus 112 ~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~ 187 (507)
....+++....+.++.+|+..++..+ ..+............+ .+....++.+.. ......+++..+
T Consensus 35 ~~~~~d~~~~~~~a~~~~~~av~v~~----------~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ve~A~~ 104 (267)
T PRK07226 35 IDGLVDIRDTVNKVAEGGADAVLMHK----------GLARHGHRGYGRDVGLIVHLSASTSLSPDPNDKVLVGTVEEAIK 104 (267)
T ss_pred CcCcCCHHHHHHHHHhcCCCEEEeCH----------hHHhhhccccCCCCcEEEEEcCCCCCCCCCCcceeeecHHHHHH
Confidence 44567788999999999999998553 1111111111112211 111111121111 234456888899
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
.|+..+.......... .....+++.++.+.++++|+++.++.
T Consensus 105 ~Gad~v~~~~~~g~~~--~~~~~~~~~~v~~~~~~~g~pl~vi~ 146 (267)
T PRK07226 105 LGADAVSVHVNVGSET--EAEMLEDLGEVAEECEEWGMPLLAMM 146 (267)
T ss_pred cCCCEEEEEEecCChh--HHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 9998776643221100 01134567778888999999998864
No 212
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=22.76 E-value=6.7e+02 Score=23.85 Aligned_cols=107 Identities=15% Similarity=0.022 Sum_probs=56.9
Q ss_pred CChhHHHHHHHhCC-ceEEEeCCCCCCCCCCCHHHHHHHH----HHHhcCceeeEEEecccc-CCCcccHHHHHHHHHcC
Q 010547 116 EGFPSGTKAAAAGG-ITTLIDMPLNSDPSTISTETLKLKV----DAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAG 189 (507)
Q Consensus 116 ~~~~~~~~~~l~~G-vTt~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 189 (507)
+.+....+..+..| ++.+...+.......-+.+.-.+.. +...++..+-++ .. ....+..+..+...+.|
T Consensus 21 ~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~g----v~~~~t~~~i~la~~a~~~G 96 (290)
T TIGR00683 21 KGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQ----VGSVNLKEAVELGKYATELG 96 (290)
T ss_pred HHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEEe----cCCCCHHHHHHHHHHHHHhC
Confidence 44667777888999 9998877522222222333333333 222333222222 22 22334556667777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHHH-HHHhc-CCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARY-KRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~-~~~v~~H~ 231 (507)
+.++-... + .+ ...+.+++..-++ .++.. +.++.+-.
T Consensus 97 ad~v~v~~-P---~y-~~~~~~~i~~yf~~v~~~~~~lpv~lYn 135 (290)
T TIGR00683 97 YDCLSAVT-P---FY-YKFSFPEIKHYYDTIIAETGGLNMIVYS 135 (290)
T ss_pred CCEEEEeC-C---cC-CCCCHHHHHHHHHHHHhhCCCCCEEEEe
Confidence 98887632 1 12 2345566665554 44555 67777654
No 213
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=22.48 E-value=7.3e+02 Score=24.22 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=65.8
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccC
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 199 (507)
....+.-+.|.--++... |...+.+++....+...-....|+++. .....+..+.|+..+.. +
T Consensus 40 ~QI~~L~~aG~dIVRvtv----~~~e~A~A~~~Ik~~~~vPLVaDiHf~----------~rla~~~~~~g~~k~RI---N 102 (361)
T COG0821 40 AQIKALERAGCDIVRVTV----PDMEAAEALKEIKQRLNVPLVADIHFD----------YRLALEAAECGVDKVRI---N 102 (361)
T ss_pred HHHHHHHHcCCCEEEEec----CCHHHHHHHHHHHHhCCCCEEEEeecc----------HHHHHHhhhcCcceEEE---C
Confidence 334566689999998553 666667777777776655555565542 23444555667666655 2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchh
Q 010547 200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (507)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 239 (507)
+| +.-..+.+..+++.|+++|+++-+-....+.-+.
T Consensus 103 PG----Nig~~~~v~~vVe~Ak~~g~piRIGVN~GSLek~ 138 (361)
T COG0821 103 PG----NIGFKDRVREVVEAAKDKGIPIRIGVNAGSLEKR 138 (361)
T ss_pred Cc----ccCcHHHHHHHHHHHHHcCCCEEEecccCchhHH
Confidence 12 1345668999999999999999998765554333
No 214
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=22.31 E-value=2.2e+02 Score=27.65 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=66.0
Q ss_pred HHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChh-HHHHHHHHHHHHHHhhccCCCCCCceEE
Q 010547 213 IKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS-WEEAAIRELLTVAKDTRTDGPAEGAHLH 291 (507)
Q Consensus 213 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~l~~~~~~~~~~~g~~~~ 291 (507)
|++++..|.+.|+++.+|..++.+. +.+.|.. ...+.+++++++.. ++.+|...+
T Consensus 194 L~~ViPVAEe~gVkmaiHPDDPP~p-------------------i~GLpRIvst~ed~~~ll~~vd-----Sp~NGiTlC 249 (362)
T COG1312 194 LKEVIPVAEEVGVKMAIHPDDPPWP-------------------IFGLPRIVSTIEDYQRLLEMVD-----SPYNGITLC 249 (362)
T ss_pred HHhhcchHHhcCceEEeCCCCCCcc-------------------ccCcchhcCCHHHHHHHHHhcc-----CccCCEEEe
Confidence 6777889999999999999877652 2223332 23334555555544 234454444
Q ss_pred EEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHH-HHHHhcCCe--eEEeCC
Q 010547 292 IVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL-WEALMDGHI--DMLSSD 368 (507)
Q Consensus 292 ~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~l~~G~~--~~lgtD 368 (507)
...+... ..-++.+.++.++-++.+.+ -...... ....|.-+.++....++..+ ..+++.|.. ..+-.|
T Consensus 250 tGS~G~~-~dnDl~~mir~F~~rI~F~H---~Rnv~~~----~~~sF~E~~hleG~~Dm~~vmka~~ee~~~G~i~mRPD 321 (362)
T COG1312 250 TGSLGAR-ADNDLPEMIREFASRIHFVH---LRNVKRE----EPGSFHETAHLEGDTDMVAVMKALHEEGYDGYIPMRPD 321 (362)
T ss_pred ccccccC-ccccHHHHHHHHhhhchhhh---hhhcccC----CCCCeeeccccCCCccHHHHHHHHHhccccCcccccCC
Confidence 4333332 33344444444444444322 1111111 12333334444444444444 444445544 557788
Q ss_pred CCCCChh
Q 010547 369 HSPTVPE 375 (507)
Q Consensus 369 ~~~~~~~ 375 (507)
|.+.-..
T Consensus 322 Hg~~i~g 328 (362)
T COG1312 322 HGHTIWG 328 (362)
T ss_pred Ccccccc
Confidence 8765443
No 215
>PLN02768 AMP deaminase
Probab=22.24 E-value=3.1e+02 Score=30.23 Aligned_cols=61 Identities=15% Similarity=0.108 Sum_probs=39.6
Q ss_pred HHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 350 KEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 350 ~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
..++.++++.|+.++|.||........+ +. +...+. .+...+++.++..++ +.|...+-+
T Consensus 714 ~HPf~~f~~~GL~VSLNTDDPL~fhtT~-----------------ep-L~EEYsvAak~~~LS~~DL~EL-arNSV~aSf 774 (835)
T PLN02768 714 RNPFPMFFLRGLNVSLSTDDPLQIHLTK-----------------EP-LVEEYSIAASVWKLSSCDLCEI-ARNSVYQSG 774 (835)
T ss_pred hChHHHHHHCCCEEEEcCCCccccCCCC-----------------CC-HHHHHHHHHHHhCcCHHHHHHH-HHHHHHHhc
Confidence 4567889999999999999875522110 00 222233 345668998888774 557777766
Q ss_pred C
Q 010547 429 Q 429 (507)
Q Consensus 429 l 429 (507)
+
T Consensus 775 f 775 (835)
T PLN02768 775 F 775 (835)
T ss_pred C
Confidence 6
No 216
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=22.09 E-value=7.5e+02 Score=24.19 Aligned_cols=98 Identities=9% Similarity=0.109 Sum_probs=63.4
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccC
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 199 (507)
.......+.|.--++... |.....+.+....+........|+++. ..........|+..+.. +
T Consensus 38 ~QI~~L~~aGceiVRvav----p~~~~A~al~~I~~~~~iPlVADIHFd----------~~lAl~a~~~g~dkiRI---N 100 (346)
T TIGR00612 38 AQIRALEEAGCDIVRVTV----PDRESAAAFEAIKEGTNVPLVADIHFD----------YRLAALAMAKGVAKVRI---N 100 (346)
T ss_pred HHHHHHHHcCCCEEEEcC----CCHHHHHhHHHHHhCCCCCEEEeeCCC----------cHHHHHHHHhccCeEEE---C
Confidence 345567789999999554 665556666666554443444444431 12233445677777776 1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccch
Q 010547 200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE 238 (507)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 238 (507)
+| +.-+++.++.+++.|++++.++-+-....+...
T Consensus 101 PG----Nig~~e~v~~vv~~ak~~~ipIRIGVN~GSL~~ 135 (346)
T TIGR00612 101 PG----NIGFRERVRDVVEKARDHGKAMRIGVNHGSLER 135 (346)
T ss_pred CC----CCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcH
Confidence 11 245689999999999999999999886655533
No 217
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=21.86 E-value=5.8e+02 Score=22.81 Aligned_cols=99 Identities=20% Similarity=0.178 Sum_probs=58.2
Q ss_pred cHHHHHHHHHcCCcEEEE-cccCCCCCCCCC--CCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccc
Q 010547 178 NASALEALLNAGVLGLKS-FMCPSGINDFPM--TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254 (507)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~--~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 254 (507)
-.++++++.+.|+..++. .+.- ...|. ..++.++++.+ ....++.+|.--..
T Consensus 14 l~~~i~~l~~~g~d~lHiDiMDg---~fvpn~~~g~~~i~~i~~---~~~~~~DvHLMv~~------------------- 68 (201)
T PF00834_consen 14 LEEEIKRLEEAGADWLHIDIMDG---HFVPNLTFGPDIIKAIRK---ITDLPLDVHLMVEN------------------- 68 (201)
T ss_dssp HHHHHHHHHHTT-SEEEEEEEBS---SSSSSB-B-HHHHHHHHT---TSSSEEEEEEESSS-------------------
T ss_pred HHHHHHHHHHcCCCEEEEeeccc---ccCCcccCCHHHHHHHhh---cCCCcEEEEeeecc-------------------
Confidence 346777887888887766 2321 22222 34555665543 36789999972111
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccc
Q 010547 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (507)
Q Consensus 255 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~ 322 (507)
| .+.++.+.+. |......|........+.++..++.|..+....+|.
T Consensus 69 ------P--------~~~i~~~~~~-------g~~~i~~H~E~~~~~~~~i~~ik~~g~k~GialnP~ 115 (201)
T PF00834_consen 69 ------P--------ERYIEEFAEA-------GADYITFHAEATEDPKETIKYIKEAGIKAGIALNPE 115 (201)
T ss_dssp ------G--------GGHHHHHHHH-------T-SEEEEEGGGTTTHHHHHHHHHHTTSEEEEEE-TT
T ss_pred ------H--------HHHHHHHHhc-------CCCEEEEcccchhCHHHHHHHHHHhCCCEEEEEECC
Confidence 1 1233333433 555678888765467788999999998887766663
No 218
>TIGR02351 thiH thiazole biosynthesis protein ThiH. Members this protein family are the ThiH protein of thiamine biosynthesis, a homolog of the BioB protein of biotin biosynthesis. Genes for the this protein generally are found in operons with other thiamin biosynthesis genes.
Probab=21.80 E-value=4.4e+02 Score=26.16 Aligned_cols=108 Identities=10% Similarity=0.080 Sum_probs=68.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc-eeeEEEeccccCCCcccHHHHHHHHHcCCcE
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGLVPENAYNASALEALLNAGVLG 192 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (507)
+.+.+...++.+...|++.+.-.. +..|.....+.+....+.+.... .+.+. ..+-..+.++.+.++|+..
T Consensus 104 s~eEI~~~a~~~~~~Gv~~i~lvg-Ge~p~~~~~e~l~eii~~Ik~~~p~i~Ie-------i~~lt~e~~~~Lk~aGv~r 175 (366)
T TIGR02351 104 NEEEIEREIEAIKKSGFKEILLVT-GESEKAAGVEYIAEAIKLAREYFSSLAIE-------VQPLNEEEYKKLVEAGLDG 175 (366)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEee-CCCCCCCCHHHHHHHHHHHHHhCCccccc-------cccCCHHHHHHHHHcCCCE
Confidence 445677777888899999998765 55566566777777776665321 11111 1124567789999999988
Q ss_pred EEEcccCCCCCC-------CCCCCHHHHHHHHHHHHhcCCc-EEE
Q 010547 193 LKSFMCPSGIND-------FPMTNASHIKEGLSVLARYKRP-LLV 229 (507)
Q Consensus 193 ~~~~~~~~~~~~-------~~~~~~~~l~~~~~~a~~~~~~-v~~ 229 (507)
+........... -+..+.+...+.++.+++.|+. +.+
T Consensus 176 ~~i~lET~~~~~y~~i~~~g~~h~~~~rl~~i~~a~~aG~~~v~~ 220 (366)
T TIGR02351 176 VTVYQETYNEKKYKKHHLAGKKKDFRYRLNTPERAAKAGMRKIGI 220 (366)
T ss_pred EEEEeecCCHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCCCeece
Confidence 877543221111 1233677778888999998876 443
No 219
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=21.60 E-value=70 Score=29.78 Aligned_cols=67 Identities=30% Similarity=0.403 Sum_probs=57.9
Q ss_pred HHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE
Q 010547 398 LPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL 475 (507)
Q Consensus 398 l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (507)
|..+.+. ....|.|.+-|++++|..||+.||+ +.+|+|..|.+||||++|.+-
T Consensus 336 Md~CvRhf~kATgCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~l------------------------- 390 (407)
T KOG3892|consen 336 MDVCVRHFLKATGCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDSL------------------------- 390 (407)
T ss_pred cHHHHHHHHHhcCCcHHHHHhhhccChHHhhccccccccccccccCceEEEccce-------------------------
Confidence 5555554 4556899999999999999999999 889999999999999999431
Q ss_pred eeEEEEEEECCEEEEe
Q 010547 476 SGKVLATISRGNLVYK 491 (507)
Q Consensus 476 ~~~V~~v~v~G~~v~~ 491 (507)
.|..+|+.|+.|++
T Consensus 391 --~V~aT~isG~~V~~ 404 (407)
T KOG3892|consen 391 --HVQATYISGELVWQ 404 (407)
T ss_pred --EEEEEEEccEEEEe
Confidence 79999999999986
No 220
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=21.07 E-value=1.1e+02 Score=29.96 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCCh-hHHHHHHHHHHHHHHhhccCCCCCCceEE
Q 010547 213 IKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPP-SWEEAAIRELLTVAKDTRTDGPAEGAHLH 291 (507)
Q Consensus 213 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~g~~~~ 291 (507)
|++++..|.+.|+++.+|+.++... +.+.|. ....+.+.+++++... +..|...+
T Consensus 188 L~~v~PvAEe~gV~laiHPDDPP~~-------------------~~GlpRi~~~~e~~~~~~~~~~S-----p~nGltfC 243 (351)
T PF03786_consen 188 LEAVIPVAEEAGVKLAIHPDDPPWP-------------------LFGLPRIVSTAEDLKRILDLVDS-----PANGLTFC 243 (351)
T ss_dssp HHHHHHHHHHCT-EEEEE--SSSS--------------------BTTB---TTSHHHHHHHHHCT-S-----TTEEEEEE
T ss_pred HHhhhHHHHHhCCEEEeCCCCCCCc-------------------cCCCCcccCCHHHHHHHHHhCCC-----ccccEEee
Confidence 6788899999999999999877652 112222 2334456666666442 12232222
Q ss_pred EEecCCh--hHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHH-HHHHhcCCeeEEeCC
Q 010547 292 IVHLSDA--SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL-WEALMDGHIDMLSSD 368 (507)
Q Consensus 292 ~~h~~~~--~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~l~~G~~~~lgtD 368 (507)
..-+... ++..+.++....+ ++.+.+.- .+... .....|.-+..+....++..+ ..+.+.|..-.+-.|
T Consensus 244 ~Gs~g~~~~ndl~~~ir~f~~~--rI~fvH~R-nv~~~-----~~~~~F~E~~h~~G~~Dm~~v~~al~~~~~~g~~rpD 315 (351)
T PF03786_consen 244 TGSLGAMPDNDLPEMIREFGER--RIHFVHFR-NVKGE-----PGDGSFEEAFHLDGDVDMYAVMKALRDVGYDGPMRPD 315 (351)
T ss_dssp CCHHHCSTTS-HHHHHHHCHHT--GEEEEEE--EEEEE------STTEEEEE-SSCSSS-HHHHHHHHHHCT-ECEEEE-
T ss_pred cCccccCCCCCHHHHHHHHhcc--CcceEEec-ccccc-----cCCCCEEecCCcCCCccHHHHHHHHHHhCCCceecCC
Confidence 2222221 1344444444443 56543221 11111 001223333333333444444 444556776688899
Q ss_pred CCCCChh
Q 010547 369 HSPTVPE 375 (507)
Q Consensus 369 ~~~~~~~ 375 (507)
|.+....
T Consensus 316 Hg~~~~~ 322 (351)
T PF03786_consen 316 HGPMMWG 322 (351)
T ss_dssp ---B-TT
T ss_pred CCcccCC
Confidence 8875443
No 221
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=21.01 E-value=7.1e+02 Score=23.51 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=58.7
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH----HHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHc
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (507)
+.+.+....+.++..|+..+...+.......-+.+.-.+ ..+...++..+- .+... ...+..+..+...+.
T Consensus 17 D~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi----~gv~~~s~~~~i~~a~~a~~~ 92 (285)
T TIGR00674 17 DFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNGRVPVI----AGTGSNATEEAISLTKFAEDV 92 (285)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCeEE----EeCCCccHHHHHHHHHHHHHc
Confidence 344567778888899999998764211122222333232 333333332222 22222 223445566677778
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
|+.++-.... ... ..+++++.+.+ +.++..+.++.+..
T Consensus 93 Gad~v~v~pP----~y~-~~~~~~i~~~~~~i~~~~~~pi~lYn 131 (285)
T TIGR00674 93 GADGFLVVTP----YYN-KPTQEGLYQHFKAIAEEVDLPIILYN 131 (285)
T ss_pred CCCEEEEcCC----cCC-CCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9988866321 112 23556665544 55666788888774
No 222
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=20.72 E-value=7.3e+02 Score=23.51 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=58.8
Q ss_pred CCCChhHHHHHHHhC-CceEEEeCCCCCCCCCCCHHHHHHHHH----HHhcCceeeEEEeccccC-CCcccHHHHHHHHH
Q 010547 114 EWEGFPSGTKAAAAG-GITTLIDMPLNSDPSTISTETLKLKVD----AAEKRIYVDVGFWGGLVP-ENAYNASALEALLN 187 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~-GvTt~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 187 (507)
+.+.+....+.++.. |++.+...+........+.+.-....+ ...++. ....+... ...+..+..+...+
T Consensus 19 D~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~----~viagv~~~~~~~ai~~a~~a~~ 94 (288)
T cd00954 19 NEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKV----TLIAHVGSLNLKESQELAKHAEE 94 (288)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCC----eEEeccCCCCHHHHHHHHHHHHH
Confidence 344567778888899 999998775222222223333333333 222222 22222322 22344566667778
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhc-CCcEEEec
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARY-KRPLLVHA 231 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~-~~~v~~H~ 231 (507)
.|+.++-... + ... ..+.+++.+.+ +.++.. +.++.+..
T Consensus 95 ~Gad~v~~~~-P---~y~-~~~~~~i~~~~~~v~~a~~~lpi~iYn 135 (288)
T cd00954 95 LGYDAISAIT-P---FYY-KFSFEEIKDYYREIIAAAASLPMIIYH 135 (288)
T ss_pred cCCCEEEEeC-C---CCC-CCCHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 8998886532 1 122 24556666554 455666 78888864
No 223
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=20.42 E-value=6.7e+02 Score=25.09 Aligned_cols=30 Identities=23% Similarity=0.327 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHHhcCCcEEEecCCccc
Q 010547 207 MTNASHIKEGLSVLARYKRPLLVHAEMEKG 236 (507)
Q Consensus 207 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 236 (507)
..+++++++.++.-...+....+|+|....
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTG 145 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTG 145 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCccc
Confidence 468888888888666677888899887553
No 224
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=20.10 E-value=1.1e+02 Score=17.19 Aligned_cols=13 Identities=23% Similarity=0.020 Sum_probs=7.4
Q ss_pred hhhhhhHHHHHHH
Q 010547 7 QWRLLPTLTLLAA 19 (507)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (507)
.++|++++.++++
T Consensus 5 ~mmKkil~~l~a~ 17 (25)
T PF08139_consen 5 SMMKKILFPLLAL 17 (25)
T ss_pred HHHHHHHHHHHHH
Confidence 4566666655554
Done!