Query 010547
Match_columns 507
No_of_seqs 135 out of 1545
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:09:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 1.1E-58 3.8E-63 475.4 40.4 441 44-506 2-452 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 4E-57 1.4E-61 463.2 43.6 444 44-506 2-455 (461)
3 3e74_A Allantoinase; (beta/alp 100.0 2.6E-57 8.8E-62 464.4 40.0 445 40-506 20-470 (473)
4 3hm7_A Allantoinase; metallo-d 100.0 2.4E-54 8.1E-59 441.7 39.9 434 41-494 4-441 (448)
5 3gri_A Dihydroorotase, dhoase; 100.0 5.8E-54 2E-58 435.0 40.3 421 45-494 2-424 (424)
6 3mpg_A Dihydroorotase, dhoase; 100.0 6.6E-53 2.2E-57 428.5 38.9 424 43-496 1-427 (428)
7 1gkp_A Hydantoinase; hydrolase 100.0 1.7E-52 6E-57 429.6 42.4 444 45-506 2-453 (458)
8 2fty_A Dihydropyrimidinase; al 100.0 7.9E-53 2.7E-57 438.5 38.6 446 42-506 2-519 (559)
9 1gkr_A Hydantoinase, non-ATP d 100.0 2.3E-51 7.9E-56 421.3 41.1 446 43-506 2-451 (458)
10 1nfg_A D-hydantoinase; TIM bar 100.0 5.3E-51 1.8E-55 418.4 39.4 443 44-506 2-452 (457)
11 2ftw_A Dihydropyrimidine amido 100.0 4.6E-50 1.6E-54 416.5 41.2 448 41-506 6-464 (521)
12 2vm8_A Dihydropyrimidinase-rel 100.0 2.8E-49 9.5E-54 410.0 41.3 448 41-506 24-482 (501)
13 2vr2_A Dihydropyrimidinase; hy 100.0 5.5E-49 1.9E-53 410.0 42.0 450 42-506 26-487 (541)
14 2gwn_A Dihydroorotase; zinc-bi 100.0 3E-49 1E-53 404.0 35.3 440 43-505 4-449 (452)
15 2z00_A Dihydroorotase; zinc bi 100.0 1.7E-47 5.7E-52 388.9 38.9 422 45-494 2-426 (426)
16 1xrt_A Dihydroorotase, dhoase; 100.0 5.2E-47 1.8E-51 389.3 38.1 421 39-492 43-467 (467)
17 3gip_A N-acyl-D-glutamate deac 100.0 2.3E-41 7.8E-46 347.6 34.0 394 40-506 4-478 (480)
18 1rk6_A D-aminoacylase; TIM bar 100.0 1.6E-37 5.3E-42 321.0 29.0 391 43-506 21-493 (496)
19 3pnu_A Dihydroorotase; TIM bar 100.0 3.9E-37 1.3E-41 299.7 22.8 327 92-480 22-358 (359)
20 3h4u_A Amidohydrolase; signatu 100.0 3.7E-36 1.3E-40 310.0 29.9 383 38-504 24-464 (479)
21 3gnh_A L-lysine, L-arginine ca 100.0 5.8E-36 2E-40 301.6 27.5 349 43-491 2-402 (403)
22 2r8c_A Putative amidohydrolase 100.0 4.7E-36 1.6E-40 304.4 25.3 356 42-497 3-419 (426)
23 3lnp_A Amidohydrolase family p 100.0 5.5E-36 1.9E-40 307.7 25.8 375 40-503 20-452 (468)
24 4f0r_A 5-methylthioadenosine/S 100.0 2.2E-36 7.6E-41 308.9 21.3 376 41-503 4-425 (447)
25 3feq_A Putative amidohydrolase 100.0 3.2E-36 1.1E-40 305.5 21.5 357 42-498 3-417 (423)
26 4dyk_A Amidohydrolase; adenosi 100.0 9.2E-36 3.1E-40 304.7 24.3 377 40-504 5-428 (451)
27 3ls9_A Triazine hydrolase; atr 100.0 1.5E-35 5E-40 303.6 25.3 373 45-503 2-444 (456)
28 2ogj_A Dihydroorotase; TIM bar 100.0 8.2E-35 2.8E-39 294.4 27.1 356 40-505 12-401 (417)
29 4dzh_A Amidohydrolase; adenosi 100.0 4.5E-35 1.5E-39 300.9 25.1 375 41-502 12-433 (472)
30 2ics_A Adenine deaminase; TIM 100.0 5.7E-35 2E-39 291.8 24.7 353 42-495 4-375 (379)
31 3hpa_A Amidohydrolase; signatu 100.0 8E-35 2.7E-39 299.5 24.6 387 38-504 24-464 (479)
32 2paj_A Putative cytosine/guani 100.0 1.2E-34 4E-39 299.8 25.9 377 41-503 8-467 (492)
33 3be7_A Zn-dependent arginine c 100.0 1.2E-34 4.1E-39 292.5 24.8 352 41-494 4-403 (408)
34 2qt3_A N-isopropylammelide iso 100.0 6.5E-34 2.2E-38 286.6 29.6 356 42-496 4-402 (403)
35 2vun_A Enamidase; nicotinate d 100.0 2.9E-33 9.9E-38 280.2 32.9 358 43-503 2-382 (386)
36 2z26_A Dihydroorotase, dhoase; 100.0 2.9E-34 9.8E-39 281.6 21.9 332 92-480 4-346 (347)
37 2p9b_A Possible prolidase; pro 100.0 5.4E-34 1.9E-38 292.0 22.0 362 41-496 11-439 (458)
38 1ra0_A Cytosine deaminase; alp 100.0 1.2E-33 4E-38 287.1 23.5 364 42-496 7-415 (430)
39 1e9y_B Urease subunit beta; hy 100.0 1.6E-33 5.3E-38 291.8 24.4 357 42-495 65-463 (569)
40 1onw_A Isoaspartyl dipeptidase 100.0 2.1E-32 7.3E-37 274.2 31.1 362 42-503 7-387 (390)
41 4ac7_C Urease subunit alpha; h 100.0 6E-34 2E-38 290.2 19.8 352 41-492 65-460 (570)
42 4ubp_C Protein (urease (chain 100.0 6E-34 2E-38 290.2 18.8 352 41-492 65-460 (570)
43 2bb0_A Imidazolonepropionase; 100.0 4.7E-33 1.6E-37 282.0 24.6 343 43-496 5-420 (421)
44 3nqb_A Adenine deaminase 2; PS 100.0 4.9E-32 1.7E-36 283.4 31.6 332 40-497 32-379 (608)
45 4aql_A Guanine deaminase; hydr 100.0 9.3E-33 3.2E-37 283.3 25.5 378 40-494 28-474 (476)
46 2ood_A BLR3880 protein; PSI-II 100.0 8E-34 2.7E-38 291.7 16.7 374 42-494 2-468 (475)
47 1p1m_A Hypothetical protein TM 100.0 9.2E-34 3.1E-38 285.8 16.7 351 45-503 1-392 (406)
48 2qs8_A XAA-Pro dipeptidase; am 100.0 2.5E-32 8.7E-37 276.3 27.2 351 40-492 4-413 (418)
49 2q09_A Imidazolonepropionase; 100.0 1E-32 3.5E-37 279.0 22.6 347 43-494 5-410 (416)
50 2i9u_A Cytosine/guanine deamin 100.0 1.2E-32 4.2E-37 280.4 23.0 369 40-494 6-431 (439)
51 2puz_A Imidazolonepropionase; 100.0 1.1E-31 3.7E-36 271.8 25.2 345 40-490 12-418 (419)
52 3v7p_A Amidohydrolase family p 100.0 3E-32 1E-36 275.8 20.0 376 45-501 2-414 (427)
53 3ooq_A Amidohydrolase; structu 100.0 1E-30 3.5E-35 262.4 28.9 338 42-494 4-390 (396)
54 2vhl_A N-acetylglucosamine-6-p 100.0 9.5E-31 3.2E-35 262.8 28.3 350 43-496 3-394 (396)
55 3iv8_A N-acetylglucosamine-6-p 100.0 3.3E-30 1.1E-34 252.4 26.9 344 45-491 5-381 (381)
56 4gy7_A Urease; JACK bean, hydr 100.0 5E-31 1.7E-35 281.7 21.4 174 42-235 336-524 (840)
57 1yrr_A N-acetylglucosamine-6-p 100.0 5.8E-31 2E-35 263.0 20.3 348 45-492 2-382 (382)
58 4f0l_A Amidohydrolase; ssgcid, 100.0 7.2E-30 2.4E-34 261.4 24.7 359 42-496 11-440 (458)
59 3mtw_A L-arginine carboxypepti 100.0 7.9E-30 2.7E-34 253.7 22.4 356 43-490 2-401 (403)
60 3mdu_A N-formimino-L-glutamate 100.0 8.4E-30 2.9E-34 260.1 19.1 360 46-497 3-436 (453)
61 2imr_A Hypothetical protein DR 100.0 4.9E-30 1.7E-34 259.5 14.4 342 40-450 34-418 (420)
62 3mkv_A Putative amidohydrolase 100.0 4.8E-28 1.6E-32 242.1 26.4 94 41-137 2-109 (426)
63 4ep8_C Urease subunit alpha; a 100.0 1.3E-31 4.4E-36 280.9 -1.6 379 38-491 60-455 (566)
64 3icj_A Uncharacterized metal-d 100.0 5.7E-28 1.9E-32 248.8 21.7 330 44-454 37-505 (534)
65 1o12_A N-acetylglucosamine-6-p 99.9 1.5E-26 5.2E-31 229.8 16.9 322 57-493 26-376 (376)
66 3ggm_A Uncharacterized protein 99.6 1.6E-15 5.4E-20 114.4 8.0 72 42-113 3-76 (81)
67 2ob3_A Parathion hydrolase; me 99.0 2.2E-08 7.4E-13 96.8 19.4 272 99-428 16-325 (330)
68 1bf6_A Phosphotriesterase homo 99.0 4.5E-08 1.5E-12 93.0 20.4 152 211-428 138-291 (291)
69 1zzm_A Putative deoxyribonucle 98.9 1.8E-07 6.1E-12 87.2 19.6 241 100-429 5-258 (259)
70 2vc7_A Aryldialkylphosphatase; 98.8 1.3E-07 4.4E-12 90.9 17.7 158 211-428 151-314 (314)
71 2y1h_A Putative deoxyribonucle 98.8 1.4E-06 4.9E-11 81.7 22.4 235 99-429 5-265 (272)
72 1yix_A Deoxyribonuclease YCFH; 98.7 1.1E-06 3.7E-11 82.1 19.8 241 100-429 3-256 (265)
73 3rcm_A TATD family hydrolase; 98.7 8E-07 2.7E-11 83.5 17.0 251 100-430 3-265 (287)
74 1xwy_A DNAse TATD, deoxyribonu 98.7 2.1E-06 7.1E-11 80.2 19.8 247 100-429 5-262 (264)
75 2xio_A Putative deoxyribonucle 98.5 3.1E-06 1.1E-10 80.6 17.4 258 99-434 2-297 (301)
76 4i6k_A Amidohydrolase family p 98.4 1.8E-05 6E-10 75.0 20.2 251 96-430 23-292 (294)
77 3gg7_A Uncharacterized metallo 98.4 1E-05 3.6E-10 74.2 17.7 232 100-433 3-248 (254)
78 3ovg_A Amidohydrolase; structu 98.4 1.6E-05 5.4E-10 77.0 19.6 175 210-444 168-345 (363)
79 3rhg_A Putative phophotriester 98.4 3E-05 1E-09 75.2 19.8 161 211-430 179-345 (365)
80 3k2g_A Resiniferatoxin-binding 98.3 6E-05 2.1E-09 73.1 20.8 162 211-430 190-355 (364)
81 3ipw_A Hydrolase TATD family p 98.3 3.5E-05 1.2E-09 73.3 18.0 253 98-429 26-322 (325)
82 2gzx_A Putative TATD related D 98.3 4.5E-05 1.5E-09 71.0 17.7 243 100-429 2-255 (265)
83 3pnz_A Phosphotriesterase fami 98.2 7.9E-05 2.7E-09 71.2 19.4 159 210-430 167-329 (330)
84 1j6o_A TATD-related deoxyribon 98.2 1.5E-05 5.1E-10 74.4 14.2 240 99-429 12-265 (268)
85 2ffi_A 2-pyrone-4,6-dicarboxyl 98.1 4.8E-05 1.6E-09 71.8 14.6 124 98-232 12-145 (288)
86 3cjp_A Predicted amidohydrolas 98.1 0.00015 5E-09 67.8 17.5 229 100-430 4-265 (272)
87 3gtx_A Organophosphorus hydrol 98.0 0.0002 6.7E-09 68.9 17.1 164 211-428 173-339 (339)
88 2dvt_A Thermophilic reversible 98.0 0.00016 5.6E-09 69.4 16.8 134 97-233 1-167 (327)
89 2pgf_A Adenosine deaminase; me 97.9 0.00013 4.6E-09 71.1 14.3 144 210-429 214-358 (371)
90 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.9 0.0012 4.1E-08 62.5 19.6 251 96-429 23-292 (303)
91 3guw_A Uncharacterized protein 97.8 0.00012 4E-09 67.7 11.7 168 100-319 2-180 (261)
92 3tn4_A Phosphotriesterase; lac 97.8 0.0012 4.1E-08 63.7 18.1 158 210-427 192-358 (360)
93 4do7_A Amidohydrolase 2; enzym 97.6 0.0013 4.3E-08 62.4 15.7 150 100-298 5-170 (303)
94 2f6k_A Metal-dependent hydrola 97.5 0.0018 6.2E-08 61.3 15.5 129 99-234 2-158 (307)
95 3iar_A Adenosine deaminase; pu 97.4 0.0014 4.7E-08 63.5 12.5 160 188-429 172-332 (367)
96 3irs_A Uncharacterized protein 97.3 0.02 6.9E-07 53.7 19.7 231 118-433 49-285 (291)
97 3e2v_A 3'-5'-exonuclease; stru 97.3 0.003 1E-07 61.3 13.4 40 98-137 12-59 (401)
98 3rys_A Adenosine deaminase 1; 97.2 0.0018 6.1E-08 62.2 10.9 158 187-429 162-320 (343)
99 3pao_A Adenosine deaminase; st 96.9 0.00084 2.9E-08 64.0 4.9 157 188-429 160-317 (326)
100 4gxw_A Adenosine deaminase; am 95.8 0.024 8.3E-07 55.0 8.5 161 188-429 180-341 (380)
101 3ij6_A Uncharacterized metal-d 95.5 0.28 9.7E-06 46.2 14.7 53 177-233 111-164 (312)
102 3qy7_A Tyrosine-protein phosph 95.0 0.11 3.8E-06 47.6 9.5 38 100-137 1-41 (262)
103 2wje_A CPS4B, tyrosine-protein 94.4 2.5 8.7E-05 38.0 17.3 40 98-137 3-45 (247)
104 2hbv_A 2-amino-3-carboxymucona 94.4 0.19 6.4E-06 48.0 10.0 110 119-233 61-180 (334)
105 2a3l_A AMP deaminase, AMPD; at 93.3 0.12 4E-06 54.0 6.6 99 293-429 542-641 (701)
106 2wm1_A 2-amino-3-carboxymucona 93.1 0.2 6.8E-06 47.8 7.6 61 169-233 115-177 (336)
107 4inf_A Metal-dependent hydrola 92.8 7.2 0.00025 37.5 18.9 53 178-234 161-214 (373)
108 3lgd_A Adenosine deaminase CEC 92.1 0.75 2.6E-05 46.2 10.4 126 188-371 291-418 (508)
109 3nur_A Amidohydrolase; TIM bar 88.2 2.1 7.2E-05 41.0 9.6 54 177-234 142-196 (357)
110 2w9m_A Polymerase X; SAXS, DNA 68.9 73 0.0025 32.4 14.0 35 100-136 328-362 (578)
111 2gwg_A 4-oxalomesaconate hydra 56.1 41 0.0014 31.6 8.8 58 176-233 122-181 (350)
112 4dzi_A Putative TIM-barrel met 51.7 64 0.0022 31.4 9.5 116 118-234 103-234 (423)
113 1v77_A PH1877P, hypothetical p 49.6 23 0.0008 30.7 5.4 52 358-429 158-209 (212)
114 2i5g_A Amidohydrolase; NYSGXRC 45.1 1.8E+02 0.0062 27.0 11.1 31 398-428 290-320 (325)
115 3p6l_A Sugar phosphate isomera 42.8 1.7E+02 0.0057 25.7 10.4 108 178-321 24-137 (262)
116 3cpr_A Dihydrodipicolinate syn 40.4 1.7E+02 0.0057 26.9 10.0 109 114-231 35-149 (304)
117 3b4u_A Dihydrodipicolinate syn 39.2 1.6E+02 0.0054 26.9 9.6 110 114-231 22-140 (294)
118 2ehh_A DHDPS, dihydrodipicolin 39.1 1.4E+02 0.0049 27.1 9.3 108 115-231 20-133 (294)
119 3e96_A Dihydrodipicolinate syn 38.7 73 0.0025 29.5 7.3 109 114-231 31-144 (316)
120 1itu_A Renal dipeptidase; glyc 38.5 1.7E+02 0.0058 27.7 9.8 182 178-429 133-336 (369)
121 2yxg_A DHDPS, dihydrodipicolin 38.4 1.3E+02 0.0045 27.3 8.9 108 115-231 20-133 (289)
122 3m5v_A DHDPS, dihydrodipicolin 37.9 1.9E+02 0.0065 26.4 10.0 110 114-231 26-141 (301)
123 1n7k_A Deoxyribose-phosphate a 36.1 2.2E+02 0.0074 25.0 9.5 106 109-228 29-137 (234)
124 3na8_A Putative dihydrodipicol 35.7 2.4E+02 0.0081 26.0 10.3 110 114-231 43-157 (315)
125 2r8w_A AGR_C_1641P; APC7498, d 35.4 2.7E+02 0.0094 25.8 11.1 110 114-231 53-167 (332)
126 3d0c_A Dihydrodipicolinate syn 34.9 1.1E+02 0.0037 28.3 7.8 109 114-231 31-144 (314)
127 2nx9_A Oxaloacetate decarboxyl 34.5 2.7E+02 0.0091 27.3 10.8 107 119-236 103-213 (464)
128 2wkj_A N-acetylneuraminate lya 34.4 1.4E+02 0.0049 27.3 8.5 107 116-231 32-145 (303)
129 3l21_A DHDPS, dihydrodipicolin 34.3 2.4E+02 0.0083 25.7 10.1 110 114-231 34-148 (304)
130 1xky_A Dihydrodipicolinate syn 34.3 1.9E+02 0.0065 26.4 9.4 109 115-231 32-145 (301)
131 1o5k_A DHDPS, dihydrodipicolin 33.8 79 0.0027 29.1 6.6 107 116-231 33-145 (306)
132 2r91_A 2-keto-3-deoxy-(6-phosp 33.2 2.7E+02 0.0093 25.1 10.6 106 116-231 19-129 (286)
133 2yxo_A Histidinol phosphatase; 32.2 26 0.00089 31.4 3.0 35 100-135 1-35 (267)
134 2v9d_A YAGE; dihydrodipicolini 32.2 3.1E+02 0.011 25.5 10.6 110 114-231 50-164 (343)
135 1m65_A Hypothetical protein YC 31.8 31 0.0011 30.4 3.4 35 100-135 3-37 (245)
136 2rfg_A Dihydrodipicolinate syn 31.1 2.9E+02 0.0099 25.1 10.0 108 116-231 21-133 (297)
137 2vc6_A MOSA, dihydrodipicolina 31.0 3E+02 0.01 24.9 10.1 109 115-231 20-133 (292)
138 3daq_A DHDPS, dihydrodipicolin 31.0 3E+02 0.01 24.9 10.1 108 116-231 23-135 (292)
139 3lmz_A Putative sugar isomeras 30.0 2.8E+02 0.0094 24.1 10.5 105 117-233 31-135 (257)
140 3p6l_A Sugar phosphate isomera 29.9 2.8E+02 0.0095 24.2 11.9 104 117-232 23-136 (262)
141 2ki0_A DS119; beta-alpha-beta, 29.5 37 0.0013 18.8 2.1 23 207-229 11-33 (36)
142 3qze_A DHDPS, dihydrodipicolin 29.4 3.3E+02 0.011 24.9 10.7 110 114-231 42-156 (314)
143 3si9_A DHDPS, dihydrodipicolin 29.1 3.4E+02 0.012 24.9 11.8 110 114-231 41-155 (315)
144 3eb2_A Putative dihydrodipicol 27.0 3.4E+02 0.012 24.6 9.7 110 114-231 23-137 (300)
145 1f6k_A N-acetylneuraminate lya 27.0 1.9E+02 0.0064 26.3 7.9 109 114-231 22-137 (293)
146 2nuw_A 2-keto-3-deoxygluconate 26.6 3.6E+02 0.012 24.3 12.1 110 114-231 18-130 (288)
147 3flu_A DHDPS, dihydrodipicolin 25.9 3.7E+02 0.013 24.3 12.7 111 113-231 25-140 (297)
148 3h5d_A DHDPS, dihydrodipicolin 25.8 3.9E+02 0.013 24.4 10.9 110 113-231 25-141 (311)
149 2yb1_A Amidohydrolase; HET: AM 25.6 57 0.0019 29.8 4.1 35 100-136 3-37 (292)
150 3tak_A DHDPS, dihydrodipicolin 25.0 3.8E+02 0.013 24.1 11.7 110 114-231 20-134 (291)
151 1w3i_A EDA, 2-keto-3-deoxy glu 24.9 3.9E+02 0.013 24.2 11.2 110 114-231 18-130 (293)
152 3a5f_A Dihydrodipicolinate syn 24.6 2.6E+02 0.0089 25.3 8.4 111 113-231 19-134 (291)
153 4dpp_A DHDPS 2, dihydrodipicol 24.4 2.7E+02 0.0091 26.3 8.5 109 114-231 78-190 (360)
154 3ly0_A Dipeptidase AC. metallo 24.4 1.9E+02 0.0066 27.3 7.5 185 178-429 147-353 (364)
155 2anu_A Hypothetical protein TM 24.3 58 0.002 29.0 3.8 34 100-135 21-54 (255)
156 1mli_A Muconolactone isomerase 24.1 25 0.00087 26.0 1.0 46 409-454 14-64 (96)
157 2ojp_A DHDPS, dihydrodipicolin 23.9 1.4E+02 0.0047 27.2 6.3 109 114-231 20-134 (292)
158 3dcp_A Histidinol-phosphatase; 23.2 65 0.0022 29.3 3.9 36 100-135 2-37 (283)
159 1rqb_A Transcarboxylase 5S sub 21.8 5.8E+02 0.02 25.5 10.7 107 119-236 120-232 (539)
160 1nvm_A HOA, 4-hydroxy-2-oxoval 21.6 4.2E+02 0.014 24.6 9.4 106 119-235 96-205 (345)
161 3fok_A Uncharacterized protein 21.0 3.1E+02 0.011 25.1 7.8 48 181-230 133-182 (307)
162 3dz1_A Dihydrodipicolinate syn 20.9 2.9E+02 0.0097 25.4 7.9 108 114-231 27-141 (313)
163 2qpx_A Predicted metal-depende 20.3 5.4E+02 0.018 24.1 13.1 22 408-429 344-370 (376)
164 3m5v_A DHDPS, dihydrodipicolin 20.0 2.9E+02 0.01 25.1 7.7 51 180-233 32-86 (301)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-58 Score=475.43 Aligned_cols=441 Identities=24% Similarity=0.336 Sum_probs=386.3
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC--CCCCChhHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~--~~~~~~~~~ 121 (507)
+++|+|++|+++++..+++|+|+||+|++|++..+ +.++||++|++|+|||||+|+|+..+.. .+.+++...
T Consensus 2 ~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~------~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~ 75 (490)
T 3dc8_A 2 STVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS------GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESG 75 (490)
T ss_dssp CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC------CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHH
T ss_pred cEEEEccEEECCCCceeeeEEEECCEEEEeccCCC------CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHH
Confidence 57999999999998888999999999999997643 4689999999999999999999987655 677889999
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH-HcCCcEEEEcccCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCPS 200 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~ 200 (507)
.+.++++||||+++++ .+.|.....+.+....+.+. +..+++.+++++....++..+++.++. +.|+.+++.|+.+
T Consensus 76 ~~aa~~~GvTtv~~~~-~~~p~~~~~~~~~~~~~~a~-~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~- 152 (490)
T 3dc8_A 76 TRAALAGGTTMVVDFA-LPSPGQSLLEALTMWDNKST-RANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAY- 152 (490)
T ss_dssp HHHHHHTTEEEEEEEE-CCC-CCCHHHHHHHHHHHTT-TCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCS-
T ss_pred HHHHHHcCEEeecccC-CCCCCcCHHHHHHHHHHHhh-cccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecC-
Confidence 9999999999999998 66676666777777776666 677888888877765555567888888 8999999998865
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
.+.+..+++++.++++.+++++.++.+|+++...+....... .+++..+...++..+|...+..++.+.+.++++.
T Consensus 153 --~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~-~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~- 228 (490)
T 3dc8_A 153 --KGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKL-LAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMA- 228 (490)
T ss_dssp --TTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHH-HHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHH-
T ss_pred --CCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHH-HhcCCCCccccccCCCHHHHHHHHHHHHHHHHHh-
Confidence 334567999999999999999999999999886653221111 1344445566778899999999999999999987
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCC----CCceeEcCCCCChhhHHHHHHH
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDAANKEKLWEA 356 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~ 356 (507)
+.++|+.|+++. +.+++++.+++.|+.+++++|||++.++.+.+... ++.++.+||+|...++..++++
T Consensus 229 ------g~~lhi~HvSt~-~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~ 301 (490)
T 3dc8_A 229 ------GCPVYIVHTSCE-QAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAG 301 (490)
T ss_dssp ------TCCEEESSCCSH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHH
T ss_pred ------CCcEEEEeCCCH-HHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHH
Confidence 889999999998 99999999999999999999999999999998876 6889999999999999999999
Q ss_pred HhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC-CCCCc
Q 010547 357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ-VSKGA 434 (507)
Q Consensus 357 l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl-~~~G~ 434 (507)
+.+|.+++++||++|+....+..+.++|...+.|+.+++..++.++.. +.+.++|++++++++|.|||++||+ +++|+
T Consensus 302 l~~G~id~i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~ 381 (490)
T 3dc8_A 302 LASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNIYPKKGA 381 (490)
T ss_dssp HHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSC
T ss_pred HhcCCceEEECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 999999999999999999988777778999999999999999999987 5667799999999999999999999 78999
Q ss_pred cccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCC-CCccccc
Q 010547 435 IAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAA-CGSPILA 506 (507)
Q Consensus 435 I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 506 (507)
|++|+.|||++||++..|.++.. .+.++.. ++||.+..+.|.|..||++|++||++|+++... .|++++.
T Consensus 382 l~~G~~ADlvv~d~~~~~~i~~~-~~~s~~~-~sp~~g~~~~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~~~ 452 (490)
T 3dc8_A 382 ILVGADADLVVWDPKRSKTISAK-TQQSAID-YNVFEGKTVTGLPRFTLTRGVVSIEEGTVKTQEGHGEFVRR 452 (490)
T ss_dssp CSTTSBCCEEEEEEEEEEECCTT-TCSSSSS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred cCCCCcCCEEEEecCcceEechh-hccccCC-CCcccCcEEeeEEEEEEECCEEEEECCEEcccCCCceeccC
Confidence 99999999999999999999888 8888888 999999999999999999999999999998654 8999864
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=4e-57 Score=463.22 Aligned_cols=444 Identities=27% Similarity=0.398 Sum_probs=382.4
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC--CCCCCCChhHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~--~~~~~~~~~~~ 121 (507)
+++|+|++|+|++++.+++|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+..+ +....+.+...
T Consensus 2 ~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~ 77 (461)
T 3sfw_A 2 KKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQA----TDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTG 77 (461)
T ss_dssp EEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC----SSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHH
T ss_pred cEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCCC----CCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHH
Confidence 589999999999888899999999999999987532 267899999999999999999999865 44567788889
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHH-cCCcEEEEcccCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCPS 200 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 200 (507)
.+.++++||||+++++ .+.|.....+.+....+.+.....+++..++......++..++++++.+ .|+.+++.++.+
T Consensus 78 ~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~- 155 (461)
T 3sfw_A 78 TKAAAFGGTTSIVDFC-LTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAY- 155 (461)
T ss_dssp HHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSS-
T ss_pred HHHHHhCCEEEEEccC-CCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEec-
Confidence 9999999999999987 6666666677777777777777788888877776555667788899988 999999998765
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
.+.+..+++++.++++.+++++.++.+|+++...+........ ..+......+...+|...+..++.+.+.++.+.
T Consensus 156 --~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~- 231 (461)
T 3sfw_A 156 --KNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQAL-AEGNTDPIYHAYTRPPEAEGEATGRAIALTALA- 231 (461)
T ss_dssp --TTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHT-
T ss_pred --CCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhHhcccCCHHHHHHHHHHHHHHHHHh-
Confidence 3345689999999999999999999999998776543322221 334445556778899999999999999999976
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC---CCCceeEcCCCCChhhHHHHHHHH
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEAL 357 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~l 357 (507)
+.++|+.|+++. ..++.++.+++.|+.+++++|||++.++.+.+.. .+..++.+||+|...++..+++++
T Consensus 232 ------g~~~hi~H~s~~-~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l 304 (461)
T 3sfw_A 232 ------DAQLYVVHVSCA-DAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSAL 304 (461)
T ss_dssp ------TCEEEECSCCSH-HHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHH
T ss_pred ------CCCEEEEecCcH-HHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHH
Confidence 899999999998 9999999999999999999999999999998875 478899999999999999999999
Q ss_pred hcCCeeEEeCCCCCCChhh-hccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC-CCCCc
Q 010547 358 MDGHIDMLSSDHSPTVPEL-KLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ-VSKGA 434 (507)
Q Consensus 358 ~~G~~~~lgtD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl-~~~G~ 434 (507)
.+|.+++++||+.++.... +....+.|...+.|+.+++..++.++... ...++|++++++++|.|||+++|+ +++|+
T Consensus 305 ~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~ 384 (461)
T 3sfw_A 305 KNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKLFGMFPQKGT 384 (461)
T ss_dssp HTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSS
T ss_pred hcCCceEEECCCCCCCchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCc
Confidence 9999999999999998443 32334679999999999999999888754 455699999999999999999999 78999
Q ss_pred cccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCC-CCccccc
Q 010547 435 IAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAA-CGSPILA 506 (507)
Q Consensus 435 I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 506 (507)
|++|+.|||+++|.+.++.++.. .+.++.. ++||.+..+.+.|..||++|++||++|+++... .|++++.
T Consensus 385 l~~G~~Ad~~~~d~~~~~~~~~~-~~~~~~~-~sp~~g~~~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~ 455 (461)
T 3sfw_A 385 IAVGSDADIVLFDPTVQRTISVE-THHMNVD-YNPFEGMQVHGDVISVLSRGAFVVRNKQFVGHAGAGRYVKR 455 (461)
T ss_dssp CSTTSBCCEEEEEEEEEEECCTT-TCCSSSS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred cCCCCcCCEEEEcCCCCEEEchH-HcccccC-CCCCCCCEecceEEEEEECCEEEEECCeeccCCCCceEecC
Confidence 99999999999999988888877 7888888 999999999999999999999999999998755 6999874
No 3
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=2.6e-57 Score=464.39 Aligned_cols=445 Identities=35% Similarity=0.616 Sum_probs=376.0
Q ss_pred CCcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChh
Q 010547 40 LPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~ 119 (507)
.++.+++|+|++|+++++..+++|+|+||||++|++..+. ..++||++|++|+|||||+|+|+..++...++.+.
T Consensus 20 ~m~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~ 94 (473)
T 3e74_A 20 HMSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD-----AKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYE 94 (473)
T ss_dssp --CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC-----EEEEEECTTCEEEECEEEEEECC---------CHH
T ss_pred cCcCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC-----CCcEEECCCCEEecCEEEEecccCCCCCCcHHHHH
Confidence 4456899999999999988899999999999999986542 26799999999999999999999988777888899
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccC
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 199 (507)
...+.++++||||+++++.++.|.....+.+....+.+.....+++..+++..... .+++.++.+.|+.++|.|+.+
T Consensus 95 ~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~~~G~~~~K~~~~~ 171 (473)
T 3e74_A 95 TGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELDEVGVVGFKCFVAT 171 (473)
T ss_dssp HHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHHHHTCSCEEEEC--
T ss_pred HHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHHHcCCCEEEEeccc
Confidence 99999999999999999856778788888888888888878888998887765543 456777778899999998865
Q ss_pred CCC----CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHH
Q 010547 200 SGI----NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275 (507)
Q Consensus 200 ~~~----~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l 275 (507)
++. +..+..+++.+.++++.+++++.++.+|+++...+... .......+......+...+|...+..++.+.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~-~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~l 250 (473)
T 3e74_A 172 CGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDEL-GEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYL 250 (473)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHH-HHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHH-hhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHH
Confidence 432 34556789999999999999999999999987543321 1111134445556677889999999999999999
Q ss_pred HHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHH
Q 010547 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWE 355 (507)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 355 (507)
+++. +.++|+.|+++. ..++.++.+++.|+.+++++|||++.++.+.+...+..++.+||+|...++..+++
T Consensus 251 a~~~-------g~~lhi~Hvst~-~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~ 322 (473)
T 3e74_A 251 AKVA-------GCRLHVCHVSSP-EGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWE 322 (473)
T ss_dssp HHHH-------TCCEEECSCCSH-HHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHH
T ss_pred HHHh-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHH
Confidence 9987 889999999998 99999999999999999999999999999988777888999999999999999999
Q ss_pred HHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCCCCCCc
Q 010547 356 ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQVSKGA 434 (507)
Q Consensus 356 ~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lgl~~~G~ 434 (507)
++.+|++++++||+.++....+ ..+|...+.|+.+++..++.++. ...+.+++++++++++|.|||++||++++|+
T Consensus 323 ~l~~G~~~~i~tDh~p~~~~~k---~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~G~ 399 (473)
T 3e74_A 323 KLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGR 399 (473)
T ss_dssp HHHTTCCCEECCCBCCCCTTTT---CSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTCTTSSC
T ss_pred HHhCCCCcEEEeCCCCCCHHHc---ccChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCc
Confidence 9999999999999999988776 35799999999999999999887 4567789999999999999999999966899
Q ss_pred cccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEe-cCcccCCCCCccccc
Q 010547 435 IAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK-EGNHAPAACGSPILA 506 (507)
Q Consensus 435 I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~-~g~~~~~~~~~~~~~ 506 (507)
|++|+.||||++|++..|.++.. .+.++.. ++||.+..+.|.|..||++|++||+ +|+++....|++++.
T Consensus 400 l~~G~~AD~vv~d~~~~~~~~~~-~~~~~~~-~sp~~g~~~~g~v~~t~v~G~~v~~~~g~~~~~~~G~~~~~ 470 (473)
T 3e74_A 400 IAPGKDADFVFIQPNSSYVLTND-DLEYRHK-VSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILK 470 (473)
T ss_dssp CSTTSBCCEEEEESSCCEECCGG-GCCSSSC-CCTTTTCEESCEEEEEEETTEEEEETTTBCCSCCCCCEECC
T ss_pred cCCCCccCEEEEeCCCCEEECHH-HccccCC-CCCCCCCEEeeEEEEEEECCEEEEecCCeEccCCCceeecC
Confidence 99999999999999999998877 7788888 9999999999999999999999999 999998889999874
No 4
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=2.4e-54 Score=441.71 Aligned_cols=434 Identities=37% Similarity=0.639 Sum_probs=372.0
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeec--CCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCCh
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF 118 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~--~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 118 (507)
++++++|+|++|+++++..+++|+|+||||++|++ ..+. .+.++||++|++|+|||||+|+|+..+.....+++
T Consensus 4 ~~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~----~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~ 79 (448)
T 3hm7_A 4 KRFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSISS----DDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGF 79 (448)
T ss_dssp -CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSCT----TSSCEEECTTCEEEECEEEEEECCCTTTSGGGCCS
T ss_pred CcccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCCC----CCCeEEECCCCEEecCEEEeeeccCCCCCCcHhHH
Confidence 34678999999999998888999999999999998 4332 26789999999999999999999998877667788
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEccc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMC 198 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 198 (507)
....+.++++|||+++++++++.|.....+.+....+.+.....+++..+++..... .+++.++.+.|+.+++.++.
T Consensus 80 ~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~~g~~~~~~~l~ 156 (448)
T 3hm7_A 80 ASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLHDGGVIGFKAFMS 156 (448)
T ss_dssp HHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHHHcCCCEEEEeec
Confidence 899999999999999998755667777788888877777666677887777665443 45677777899999998876
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHh
Q 010547 199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278 (507)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 278 (507)
+...+..+..+.+.+.++++.|++++.++.+|+++...+........ .++..+...++..+|...+..++.+.+.++++
T Consensus 157 ~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~ 235 (448)
T 3hm7_A 157 ECGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAI-EEQRLTVKDYSEARPIVSELEAVERILRFAQL 235 (448)
T ss_dssp SCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHH-HTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHH-hcCCcChhhccccCCHHHHHHHHHHHHHHHHH
Confidence 65433334568999999999999999999999998765442111111 34455666777889999999999999999998
Q ss_pred hccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHh
Q 010547 279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM 358 (507)
Q Consensus 279 ~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 358 (507)
. +.++|+.|+++. ..++.++.+++.|+.+++++|||++.++.+.+...+..++.+||+|...++..+++++.
T Consensus 236 ~-------g~~~~i~H~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~ 307 (448)
T 3hm7_A 236 T-------CCPIHICHVSSR-KVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLM 307 (448)
T ss_dssp H-------TCCEEECCCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHH
T ss_pred h-------CCCEEEEeCCCH-HHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHh
Confidence 7 889999999998 99999999999999999999999999999888777889999999999999999999999
Q ss_pred cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC-CCCCccc
Q 010547 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIA 436 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~ 436 (507)
+|..++++||+.|++...+.. ++|...+.|+.+++..++.++... ...+++++++++++|.|||++||+ +++|+|+
T Consensus 308 ~g~~~~i~tD~~p~~~~~k~~--~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~ 385 (448)
T 3hm7_A 308 AGEIDLISSDHSPSLPQMKTG--KTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQ 385 (448)
T ss_dssp HTCCCEECCCBCCCCGGGGCC--SSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCS
T ss_pred cCCccEEEeCCCCCCHHHccc--CCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCccc
Confidence 999999999999998877643 258889999999999999988754 477899999999999999999999 7899999
Q ss_pred cCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCc
Q 010547 437 IGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 437 ~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
+|+.|||+++|.+.++.++.. .+.++.. ++||.+..+.|.|..||++|++||++|+
T Consensus 386 ~G~~Ad~~~~d~~~~~~~~~~-~~~~~~~-~sp~~g~~~~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 386 VGAEASFTLIDLNESYTLNAS-DLYYRHP-ISPYVGQRFRGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp TTSBCCEEEEEEEEEEECCGG-GCCSSSC-CCTTTTCEEEEEEEEEEETTEEEEECC-
T ss_pred CCCcCCEEEEeCCCCEEEChH-hcccccC-CCCCCCCEEEEEEEEEEECCEEEEECCC
Confidence 999999999999988988877 7788888 9999999999999999999999999875
No 5
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.8e-54 Score=434.99 Aligned_cols=421 Identities=24% Similarity=0.380 Sum_probs=360.9
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHHH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKA 124 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~ 124 (507)
++|+|++|++.....+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+..++....+.+....+.
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~ 78 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPS---NGVDIIDAKGHFVSPGFVDVHVHLREPGGEYKETIETGTKA 78 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCC---SSCEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEEeCeEEeeecCCCCCCCCHHHHHHHHHH
Confidence 789999999944366899999999999999876532 26789999999999999999999998777778889999999
Q ss_pred HHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-CcccHHHHHHHHHcCCcEEEEcccCCCCC
Q 010547 125 AAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGIN 203 (507)
Q Consensus 125 ~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (507)
++++||||+++++ .+.|.....+.+....+.+.....+++..++.+... .++..+++.++.+.|+.++.. .
T Consensus 79 ~~~~G~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~~~~~~-------~ 150 (424)
T 3gri_A 79 AARGGFTTVCPMP-NTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTD-------D 150 (424)
T ss_dssp HHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHHTTTCCCEEE-------C
T ss_pred HHhCCEEEEeECc-CCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHHhcCcEEEec-------C
Confidence 9999999999998 777877888888888777776555666655554432 223345577777888887754 3
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCC
Q 010547 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283 (507)
Q Consensus 204 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 283 (507)
+.+..+++.++++++.+++++.++.+|+++...+..... +++......+...+|...+..++.+.+.++++.
T Consensus 151 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~----~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~---- 222 (424)
T 3gri_A 151 GVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAM----HEGKRSKELGIPGIPNICESVQIARDVLLAEAA---- 222 (424)
T ss_dssp SSCCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCE----ESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHH----
T ss_pred CcCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhh----hcCccchhhCCCCCCHHHHHHHHHHHHHHHHHh----
Confidence 445678999999999999999999999998876543222 233344455667789999999999999999977
Q ss_pred CCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCee
Q 010547 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (507)
Q Consensus 284 ~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 363 (507)
|.++|+.|+++. ..++.++.+++.|+.+++++|||++.++.+.+...++.++.+||+|...++..+++++.+|.++
T Consensus 223 ---g~~~~i~H~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~ 298 (424)
T 3gri_A 223 ---GCHYHVCHVSTK-ESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID 298 (424)
T ss_dssp ---TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC
T ss_pred ---CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce
Confidence 889999999998 9999999999999999999999999999999988899999999999999999999999999999
Q ss_pred EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCc
Q 010547 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHAD 442 (507)
Q Consensus 364 ~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~AD 442 (507)
+++||++|+....+. .+|...+.|+.+++..++.++.. ..+.++|++++++++|.|||+++|+ ++|+|++|+.||
T Consensus 299 ~igtDhap~~~~~k~---~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~-~~g~l~~G~~Ad 374 (424)
T 3gri_A 299 CIATDHAPHARDEKA---QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL-EYGTLKENGYAD 374 (424)
T ss_dssp EECCCBCCCCHHHHT---SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC-SCSCCCTTSBCC
T ss_pred EEEcCCCCCCHHHcc---CCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC-CCCcccCCCcCC
Confidence 999999999988764 47899999999999999988865 4566799999999999999999999 689999999999
Q ss_pred EEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCc
Q 010547 443 LVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 443 lvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
|+++|++.+|.++.. .+.++.. ++||.+..+.|.|..||++|++||++|+
T Consensus 375 ~~~~d~~~~~~~~~~-~~~~~~~-~sp~~g~~~~g~v~~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 375 LTIIDLDSEQEIKGE-DFLSKAD-NTPFIGYKVYGNPILTMVEGEVKFEGDK 424 (424)
T ss_dssp EEEEESSCCEECCGG-GCSSSCC-CCTTTTCEESCEEEEEEETTEEEEEC--
T ss_pred EEEEcCCCCEEEchh-hcccccC-CCCcCCCEEeeeEEEEEECCEEEEeCCC
Confidence 999999999988877 7788888 9999999999999999999999999985
No 6
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=6.6e-53 Score=428.48 Aligned_cols=424 Identities=27% Similarity=0.437 Sum_probs=360.2
Q ss_pred ceEEEEecEEECCCC-ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 43 NQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
++++|+|++|+|..+ ..+++|+|+||||++|++..+. .+.++||++|++|+|||||+|+|+..++....+.+...
T Consensus 1 m~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~ 76 (428)
T 3mpg_A 1 MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENITA----DNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETG 76 (428)
T ss_dssp CEEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCCC----TTSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHH
T ss_pred CcEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCCC----CCCeEEECCCCEEeeCEEEEeeccCCCCCCchhHHHHH
Confidence 368999999997555 5689999999999999986542 26789999999999999999999988777778889999
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC-cccHHHHHHHHHcCCcEEEEcccCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLKSFMCPS 200 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (507)
.+.++++||||+++++ .+.|.....+.+....+.+......++..++.+.... .+....+.++.+.|+.++..
T Consensus 77 ~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~G~~~~~~----- 150 (428)
T 3mpg_A 77 TLAAAKGGFTTICAMP-NTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFAFTD----- 150 (428)
T ss_dssp HHHHHHHTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHHHTTCCCEEC-----
T ss_pred HHHHHhCCeEEEEeCC-CCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHHHhCCEEEEC-----
Confidence 9999999999999998 7777777788888877777655556666655444322 23344567777888877743
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
.+.+..+++.+.++++.+++++.++.+|+++...+..... ..+......++..+|...+..++.+.+.++++.
T Consensus 151 --~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~----~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~- 223 (428)
T 3mpg_A 151 --DGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCV----HEGKFSEKHGLNGIPSVCESVHIARDILLAEAA- 223 (428)
T ss_dssp --TTSCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSE----ETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHH-
T ss_pred --CCcCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHh----hcCccchhhCcCCCCHHHHHHHHHHHHHHHHHh-
Confidence 3445678999999999999999999999998766442222 233334445667788888999999999999876
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 360 (507)
+.++|+.|+++. ..++.++.+++.|+.+++++|||++.++.+.+...+..++.+||+|...++..+++++.+|
T Consensus 224 ------g~~~~i~H~s~~-~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G 296 (428)
T 3mpg_A 224 ------DCHYHVCHVSTK-GSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDG 296 (428)
T ss_dssp ------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHT
T ss_pred ------CCCEEEEeCCCH-HHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCC
Confidence 889999999998 8999999999999999999999999999999988899999999999999999999999999
Q ss_pred CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCC
Q 010547 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGN 439 (507)
Q Consensus 361 ~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~ 439 (507)
.+++++||+.+++...+.. .|...+.|+.+++..++.++.. ....+++++++++++|.|||++||++ +|+|++|+
T Consensus 297 ~i~~i~tDh~p~~~~~k~~---~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~-~g~i~~G~ 372 (428)
T 3mpg_A 297 TIDMIATDHAPHTAEEKAQ---GIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLE-AGRLKEGR 372 (428)
T ss_dssp SSCCBCCCBCCCCTTGGGS---CTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTCS-CSCCCTTS
T ss_pred CCcEEEcCCCCCCHHHccc---CHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-CccccCCC
Confidence 9999999999998777643 5888999999999999988875 44557999999999999999999997 89999999
Q ss_pred CCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc
Q 010547 440 HADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA 496 (507)
Q Consensus 440 ~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~ 496 (507)
.|||+++|++..+.++.. .+.++.. ++||.+..+.|.|..||++|++||++|+++
T Consensus 373 ~Ad~~~~d~~~~~~~~~~-~~~~~~~-~~~~~g~~~~g~v~~t~v~G~~v~~~g~~~ 427 (428)
T 3mpg_A 373 TADITIIDLEQEEEIDPT-TFLSKGK-NTPFAGWKCQGWPVMTIVGGKIAWQKESAL 427 (428)
T ss_dssp BCCEEEEESSCCEECCGG-GCSSSCC-CCSCTTCEECCEEEEEEETTEEEEECSCC-
T ss_pred cCCEEEEcCCCCEEEchh-hccccCC-CCCcCCCEEeeEEEEEEECCEEEEeCCccc
Confidence 999999999998888777 7788888 999999999999999999999999999874
No 7
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=1.7e-52 Score=429.64 Aligned_cols=444 Identities=24% Similarity=0.346 Sum_probs=352.0
Q ss_pred EEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCC--CCCCCCChhHHH
Q 010547 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSGT 122 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~--~~~~~~~~~~~~ 122 (507)
++|+|++|+++++..+++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+... +....+++....
T Consensus 2 ~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 78 (458)
T 1gkp_A 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAP---PGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGS 78 (458)
T ss_dssp EEEESCEEEETTEEEECEEEESSSBCCEEESCCCCC---TTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHH
T ss_pred EEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHH
Confidence 689999999998777899999999999999864322 256899999999999999999999764 223456777778
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCC
Q 010547 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI 202 (507)
Q Consensus 123 ~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (507)
+.++++||||+++++ .+.+.....+.+....+....+..+++..+.......++..+.++++.+.|+..++.++.+.
T Consensus 79 ~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-- 155 (458)
T 1gkp_A 79 KAALMGGTTTYIEMC-CPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFKIFLSYK-- 155 (458)
T ss_dssp HHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHHHTTCCEEEEEECST--
T ss_pred HHHHhCCccEEEeCC-CCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHHHhCCCEEEEEeccC--
Confidence 888999999999986 44344444556666555555556666666554444444456778888888998888876542
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccC
Q 010547 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTD 282 (507)
Q Consensus 203 ~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~ 282 (507)
.....+++.+.++++.|++++.++.+|++....+........ ..+......+...+|...+.+++.+.+.++...
T Consensus 156 -~~~~~~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--- 230 (458)
T 1gkp_A 156 -NFFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLL-SEGKTGPEWHEPSRPEAVEAEGTARFATFLETT--- 230 (458)
T ss_dssp -TTTBCCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHH-HTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHH---
T ss_pred -CCcCCCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhhccCcCCHHHHHHHHHHHHHHHHHh---
Confidence 224578999999999999999999999987655433222110 223333333445678878888888888888876
Q ss_pred CCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC---CCCceeEcCCCCChhhHHHHHHHHhc
Q 010547 283 GPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALMD 359 (507)
Q Consensus 283 ~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~l~~ 359 (507)
+.++|+.|+++. ..++.++.+++.|+.+++++||+++.++.+.+.. .+..++..|++|....++.+++++.+
T Consensus 231 ----g~~~~~~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~ 305 (458)
T 1gkp_A 231 ----GATGYVVHLSCK-PALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQ 305 (458)
T ss_dssp ----TCEEEECSCCSH-HHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHT
T ss_pred ----CCCEEEEeCCCH-HHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHhc
Confidence 889999999987 7889999999999999889999998888776532 12334567899998889999999999
Q ss_pred CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcC-CCHHHHHHHHhhchhHHhCC-CCCCcccc
Q 010547 360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAGQ-VSKGAIAI 437 (507)
Q Consensus 360 G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g-ls~~~al~~~T~n~A~~lgl-~~~G~I~~ 437 (507)
|+.+++|||+.+++...+....+.|...+.|+.+++..+..++....+.+ +|++++++++|.|||++||+ +++|+|++
T Consensus 306 G~~~~~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~ 385 (458)
T 1gkp_A 306 GFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAV 385 (458)
T ss_dssp TSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCT
T ss_pred CCeeEEECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCC
Confidence 99999999999988765544445688778889999998888877655554 99999999999999999999 67999999
Q ss_pred CCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCC-Cccccc
Q 010547 438 GNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAAC-GSPILA 506 (507)
Q Consensus 438 G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~-~~~~~~ 506 (507)
|++||||++|.+..+.++.. .+.+... ++||.++...+.|..||++|++||++|+++...+ |+++|.
T Consensus 386 G~~ADlvv~d~~~~~~~~~~-~~~~~~~-~~p~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 453 (458)
T 1gkp_A 386 GSDADLVVYDPQYRGTISVK-TQHVNND-YNGFEGFEIDGRPSVVTVRGKVAVRDGQFVGEKGWGKLLRR 453 (458)
T ss_dssp TSBCCEEEEETTCCEECCGG-GCCSSSS-CCTTTTCEESCEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred CCcCCEEEEeCCCCeEEchH-HcccccC-CCccCCCEEeeEEEEEEECCEEEEECCeeccCCCCceeccC
Confidence 99999999999988887765 5666667 8999999999999999999999999999998776 999974
No 8
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=7.9e-53 Score=438.53 Aligned_cols=446 Identities=24% Similarity=0.362 Sum_probs=352.4
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC---CCCCCCh
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---RTEWEGF 118 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~---~~~~~~~ 118 (507)
+++++|+|++|+++++..+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+..+. ..+.+++
T Consensus 2 ~m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~ 78 (559)
T 2fty_A 2 IYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPS---LGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTM 78 (559)
T ss_dssp CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGG---GEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCH
T ss_pred CceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHH
Confidence 457899999999998877899999999999999764321 1467999999999999999999998762 3356778
Q ss_pred hHHHHHHHhCCceEEEeCCCCCC---CCCC-CHHHHHHHHHHHhc-CceeeEEEeccccCC---Ccc---cH-HHHHHHH
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSD---PSTI-STETLKLKVDAAEK-RIYVDVGFWGGLVPE---NAY---NA-SALEALL 186 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~---p~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~~~~~~ 186 (507)
....+.++++||||+++++ .+. +... ..+.+....+.... +..+++.++...... ..+ .. +++.++.
T Consensus 79 ~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~ 157 (559)
T 2fty_A 79 EHATRSAVAGGTTTVVAFS-TQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAY 157 (559)
T ss_dssp HHHHHHHHHTTEEEEEEEE-ECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcEEEEEECc-CcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHHH
Confidence 8888999999999999986 333 2222 22222100122222 355666655444332 112 33 5666666
Q ss_pred -HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 187 -NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 187 -~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
+.|+.+++.++.+. + ...+++++.++++.|++++.++.+|+++...+........ ..+......+...+|...+
T Consensus 158 ~~~G~~~iki~~~~~---~-~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~-~~G~~~~~~~~~~~p~~~E 232 (559)
T 2fty_A 158 NDYGVSSVKMFMTYP---G-LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALE-EQGLTDAYYHGVSRPSIVE 232 (559)
T ss_dssp HHHCCCEEEEESSST---T-TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSTTHHHHTSCHHHH
T ss_pred HHCCCCEEEEEecCC---C-CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHH-hcCCCChhhcccCCCHHHH
Confidence 67888999987653 2 3678999999999999999999999988765443221111 2333344455667888889
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCC-------------
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP------------- 332 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~------------- 332 (507)
.+++.+.+.++.+. +.++|+.|+++. ..++.++.+++.|+.+++++||+++.++.+.+.
T Consensus 233 ~~av~~~i~la~~~-------g~~vhi~H~s~~-~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~ 304 (559)
T 2fty_A 233 GEATNRAITLATTM-------DTPILFVHVSSP-QAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVG 304 (559)
T ss_dssp HHHHHHHHHHHHHT-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC--------CCS
T ss_pred HHHHHHHHHHHHHh-------CCCEEEEcCCCH-HHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccccccc
Confidence 99999999999875 888999999987 889999999999999999999999988876661
Q ss_pred ----------------C-CCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhh-------------ccccC
Q 010547 333 ----------------D-GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK-------------LLDEG 382 (507)
Q Consensus 333 ----------------~-~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~-------------~~~~~ 382 (507)
. .++.++.+||+|...+++.+++++++|++++++||+.+++...+ ..+.+
T Consensus 305 ~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~ 384 (559)
T 2fty_A 305 IDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNG 384 (559)
T ss_dssp CCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEES
T ss_pred cCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccC
Confidence 1 24667889999999999999999999999999999998876542 22246
Q ss_pred CccccCCCCchhhhHHHHHHHHHH-hcCC-CHHHHHHHHhhchhHHhCC-CCCCccccC-CCCcEEEEcCCC--------
Q 010547 383 NFLKAWGGISSLQFVLPVTWSYGR-KYGV-TLEQLASWWSERPAKLAGQ-VSKGAIAIG-NHADLVVWEPEA-------- 450 (507)
Q Consensus 383 ~~~~~~~~~~~~~~~l~~~~~~~~-~~gl-s~~~al~~~T~n~A~~lgl-~~~G~I~~G-~~ADlvvld~~~-------- 450 (507)
+|...+.|+.+++..++.++.... +..+ +++++++++|.|||++||+ +++|+|++| +.||||+||++.
T Consensus 385 ~f~~~~~G~~g~e~~l~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~ 464 (559)
T 2fty_A 385 EFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSK 464 (559)
T ss_dssp CGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTS
T ss_pred CHhhCCCCCccHHHHHHHHHHHHHHcCCCCCHHHHHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCc
Confidence 899999999999999998886554 4459 9999999999999999999 779999999 999999999997
Q ss_pred ceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCC-CCCccccc
Q 010547 451 EFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPILA 506 (507)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~-~~~~~~~~ 506 (507)
++.++.. .+.+... ++||.+....+.|..||++|++||++|+++.. ..|+||+.
T Consensus 465 ~~~~~~~-~~~s~~~-~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~ 519 (559)
T 2fty_A 465 PKLITNK-LMEHNCD-YTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKR 519 (559)
T ss_dssp CSBCCTG-GGTSSCS-CCTTTTCBCSCCEEEEEETTEEEEETTEECGGGCCCCBCCC
T ss_pred cEEEchH-HhcccCC-CCCccCCEecceEEEEEECCEEEEECCeeccCCcCCeeecC
Confidence 7777766 7778888 99999999999999999999999999999865 45999974
No 9
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=2.3e-51 Score=421.33 Aligned_cols=446 Identities=28% Similarity=0.451 Sum_probs=348.1
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC-CCCCCChhHH
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPSG 121 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~-~~~~~~~~~~ 121 (507)
.+++|+|++|+++++..+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+.... ..+.+++...
T Consensus 2 ~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 78 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDV---EASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRYGRFELD 78 (458)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTC---CEEEEEECTTCEEEECEEEEEEECCCGGGTTTSCCHHHH
T ss_pred ceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEecCEEEeeecccCCCCCCchhHHHHH
Confidence 47899999999998777899999999999999764221 2467999999999999999999998754 4456677888
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (507)
.+.++++||||+++++.++.|.....+.+....+.+.... +++..+.+... ...+++.++.+.|+.+++.++.+..
T Consensus 79 ~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~~~i~~~~~~~~ 154 (458)
T 1gkr_A 79 SESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMHDAGAVGFKSMMAASV 154 (458)
T ss_dssp HHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHHHTTCCEEEEESSCSB
T ss_pred HHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHHHcCCcEEEEeecccC
Confidence 8899999999999986223444445666666666665554 56655544432 2356677888889999998876543
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
....+..+.+.++++++.|++++.++.+|++....++....... ..+......+....|...+...+.+...+..+.
T Consensus 155 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~-~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~-- 231 (458)
T 1gkr_A 155 PGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIK-AAGGKDMAAYEASQPVFQENEAIQRALLLQKEA-- 231 (458)
T ss_dssp TTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHH--
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHh-hcCccchhhccccCCHHHHHHHHHHHHHHHHHh--
Confidence 22234678999999999999999999999987654332111000 111112222333456667777888888888876
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 361 (507)
+.++|+.|+++. ..++.+.++++.|+.+++++||+++.++.+.+...+..++..|+++.......+++++++|+
T Consensus 232 -----g~~~h~~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~ 305 (458)
T 1gkr_A 232 -----GCRLIVLHVSNP-DGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGL 305 (458)
T ss_dssp -----CCEEEECCCCSH-HHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTC
T ss_pred -----CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCC
Confidence 888999999986 77888888888998889999999988876665444556777899999999999999999999
Q ss_pred eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCC
Q 010547 362 IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGN 439 (507)
Q Consensus 362 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~ 439 (507)
.+++|||+.+++...+..+..++.....++.+.+..+..++.... ..++|++++++++|.|||++||+ +++|+|++||
T Consensus 306 ~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~ 385 (458)
T 1gkr_A 306 IDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGS 385 (458)
T ss_dssp CCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTS
T ss_pred ceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCC
Confidence 999999998876654432224677777888998888877776444 44799999999999999999999 6799999999
Q ss_pred CCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCC-Cccccc
Q 010547 440 HADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAAC-GSPILA 506 (507)
Q Consensus 440 ~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~-~~~~~~ 506 (507)
.||||++|.+..+.++.. ++.+... ++||.+....+.|..||++|++||++|+++.... |++++.
T Consensus 386 ~ADlvv~d~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 451 (458)
T 1gkr_A 386 DADLLILDLDIDTKVDAS-QFRSLHK-YSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVTR 451 (458)
T ss_dssp BCCEEEEESCCCEECCGG-GCSSSCC-CCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBCCC
T ss_pred cCCEEEEcCCcceEEcHH-HccccCC-CCCcCCCEeeeEEEEEEECCEEEEECCccccCCCCCeecCC
Confidence 999999999988877666 6677777 9999999999999999999999999999988776 999975
No 10
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=5.3e-51 Score=418.45 Aligned_cols=443 Identities=26% Similarity=0.393 Sum_probs=348.3
Q ss_pred eEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCC-CCCC-CCCChhHH
Q 010547 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD-PGRT-EWEGFPSG 121 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~-~~~~-~~~~~~~~ 121 (507)
+++|+|++|+++++..+++|+|+||||++|++..+ .+.++||++|++|+|||||+|+|+.. .... ..+++...
T Consensus 2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~-----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~ 76 (457)
T 1nfg_A 2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG-----PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATA 76 (457)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC-----CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHH
T ss_pred cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC-----CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHH
Confidence 57999999999988778999999999999987542 25689999999999999999999973 2222 45677778
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (507)
.+.++++||||+++++ .+.|.....+.+....+.......+++..+.+.....+...+.+.++.+.|+.+++.++.+..
T Consensus 77 ~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~k~~~~~~~ 155 (457)
T 1nfg_A 77 TVAAACGGTTTIVDFC-QQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFKVFMAYRG 155 (457)
T ss_dssp HHHHHHTTEEEEEEEE-ECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGGGGTCCEEEEESSSTT
T ss_pred HHHHHhCCcEEEEeCC-CCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHHHcCCCEEEEeeccCC
Confidence 8899999999999987 444555556667766666655566677666655444443344555666789999999875432
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhcc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 281 (507)
....+.+++.++++.+++.+.++.+|++....+...+.... ..+......+....|...+.+.+.+.++++++.
T Consensus 156 ---~~~~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~-- 229 (457)
T 1nfg_A 156 ---MNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFV-AEGKTAPIYHALSRPPRVEAEATARALALAEIV-- 229 (457)
T ss_dssp ---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHH--
T ss_pred ---CCCCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHH-hcCCcchhhccccCCHHHHHHHHHHHHHHHHHH--
Confidence 12357788999999999999999999987665443322110 111112222333567778888999999999987
Q ss_pred CCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC---CCCceeEcCCCCChhhHHHHHHHHh
Q 010547 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM 358 (507)
Q Consensus 282 ~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~l~ 358 (507)
|.++|+.|+.+. ..++.++.+++.|..+.+++++|++.++.+.+.. .+..+..+|+++.......+++++.
T Consensus 230 -----g~~~~~~H~~~~-~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~ 303 (457)
T 1nfg_A 230 -----NAPIYIVHVTCE-ESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALR 303 (457)
T ss_dssp -----TCCEEECCCCSH-HHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHH
T ss_pred -----CCCEEEEeCCcH-HHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHh
Confidence 888999999976 7788898888889888888899999998777654 4667788899998888899999999
Q ss_pred cCCeeEEeCCCCCCChh-hhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccc
Q 010547 359 DGHIDMLSSDHSPTVPE-LKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIA 436 (507)
Q Consensus 359 ~G~~~~lgtD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~ 436 (507)
+|+.+++|||+.+++.. .+....++|...+.++.+.+..+..++......++|++++++++|.|||++||+ +++|+|+
T Consensus 304 ~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~ 383 (457)
T 1nfg_A 304 NGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIA 383 (457)
T ss_dssp TTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHHHHTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCS
T ss_pred CCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcC
Confidence 99999999999877644 232222567777788889898887777545555799999999999999999999 5799999
Q ss_pred cCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCC-Cccccc
Q 010547 437 IGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAAC-GSPILA 506 (507)
Q Consensus 437 ~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~-~~~~~~ 506 (507)
+|+.||||++|.+..+.++.. ++.+... ++||.+....+.|..||++|++||++|+++...+ |++++.
T Consensus 384 ~G~~ADlvv~d~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 452 (457)
T 1nfg_A 384 VGSDADIVLWDPEAEMVIEQT-AMHNAMD-YSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKR 452 (457)
T ss_dssp TTSBCCEEEEEEEEEEECCGG-GSCSSCS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTSCCBCCC
T ss_pred CCCccCEEEEeCCCCEEecHH-HccCCCC-CCCccCCEecceEEEEEECCEEEEECCccccCCCCCeeeCC
Confidence 999999999999888777665 6677777 9999999999999999999999999999988777 999975
No 11
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=4.6e-50 Score=416.49 Aligned_cols=448 Identities=21% Similarity=0.286 Sum_probs=348.4
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC--CCCCCh
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGF 118 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~--~~~~~~ 118 (507)
++.+++|+|++|++++...+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..+.. .+.+++
T Consensus 6 ~~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~ 82 (521)
T 2ftw_A 6 QTGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPK---EGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDF 82 (521)
T ss_dssp -CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCC---SSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCH
T ss_pred ccCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHH
Confidence 4567999999999988877899999999999999864322 25689999999999999999999976422 245678
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH-HcCCcEEEEcc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFM 197 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 197 (507)
....+.++++||||++++. .+.+.....+.+......+.....+++.++.......+...+++.++. +.|+.+++.|+
T Consensus 83 ~~~~~~a~~~G~Ttv~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~ 161 (521)
T 2ftw_A 83 DIGTQAAVAGGTTFIIDFV-IPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFM 161 (521)
T ss_dssp HHHHHHHHHTTEEEEEEEE-CCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEES
T ss_pred HHHHHHHHhCCcceecCcC-CCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEe
Confidence 8888999999999999975 222222334444444444334455566665544333334455666666 47899999887
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHH
Q 010547 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 277 (507)
.+. +....+++++.++++.|++++.++.+|+++...+...+.... ..+......+....|+..+..++.+.+.++.
T Consensus 162 ~~~---~~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~-~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~ 237 (521)
T 2ftw_A 162 AYK---NSFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKML-EMGITGPEGHELSRPEALEAEATNRAIVIAD 237 (521)
T ss_dssp SCT---TTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHHSCTHHHHHHHHHHHHHHH
T ss_pred ccC---CCcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-HcCCCChhhccccCcHHHHHHHHHHHHHHHH
Confidence 542 224578999999999999999999999987653332222111 2222222222334566677777777777777
Q ss_pred hhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC----CCCceeEcCCCCC-hhhHHH
Q 010547 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKEK 352 (507)
Q Consensus 278 ~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~-~~~~~~ 352 (507)
.. +.++|+.|+.+. ...+.++.+++.|+.++++++++++.++...+.. .+..++.+||+|. ...++.
T Consensus 238 ~~-------~~p~hi~h~ss~-~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~ 309 (521)
T 2ftw_A 238 SV-------CTPVYIVHVQSI-GAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGV 309 (521)
T ss_dssp HH-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHH
T ss_pred Hh-------CCCEEEEecCcH-HHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHH
Confidence 65 778999999987 8889999999999999999999998887765532 1234567899997 678889
Q ss_pred HHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHhCC-C
Q 010547 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLAGQ-V 430 (507)
Q Consensus 353 ~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~gls~~~al~~~T~n~A~~lgl-~ 430 (507)
+++++.+|...+++||+.++....+....++|...+.|+.+++..++.++....+ .+++++++++++|.|||++||+ +
T Consensus 310 l~~~l~~g~~~~~gsD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~ 389 (521)
T 2ftw_A 310 LMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYP 389 (521)
T ss_dssp HHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred HHHHhcCCCEEEEEeCCCCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCC
Confidence 9999999999999999999887766655567888888999999999888875544 4699999999999999999999 6
Q ss_pred CCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc-CCCCCccccc
Q 010547 431 SKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA-PAACGSPILA 506 (507)
Q Consensus 431 ~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~-~~~~~~~~~~ 506 (507)
++|+|++|++|||||||++..+.+... .+.++.. ++||.+....|.|..||++|++||++|+++ ...+|++++-
T Consensus 390 ~~G~i~~G~~ADlvv~d~~~~~~i~~~-~~~~~~~-~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 464 (521)
T 2ftw_A 390 RKGRIDVGCDGDIVIWDPNQSKTISKD-THHHAVD-FNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPR 464 (521)
T ss_dssp TSSCCSTTSBCCEEEEEEEEEEECCTT-TCCCSSS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred CCCCcCCCCcCCEEEEeCCCCEEEChH-HccccCC-CCCcCCCEeeeeEEEEEECCEEEEECCeecccCcCceEecC
Confidence 799999999999999999988888777 7778888 999999999999999999999999999998 5688999974
No 12
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=2.8e-49 Score=409.99 Aligned_cols=448 Identities=22% Similarity=0.275 Sum_probs=341.5
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC--CCCCCh
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGF 118 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~--~~~~~~ 118 (507)
.+++++|+|++|+++++..+++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+.. .+.+++
T Consensus 24 ~~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~ 100 (501)
T 2vm8_A 24 TSDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVP---GGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDF 100 (501)
T ss_dssp -CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCC---SSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCH
T ss_pred CcCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCC---CCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHH
Confidence 3467999999999998877899999999999999865322 25689999999999999999999976432 245678
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH-HcCCcEEEEcc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFM 197 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 197 (507)
....+.++++||||+++++ .+.|.....+.+....+.........+..+.......+...+++.++. +.|+.+++.++
T Consensus 101 ~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~ 179 (501)
T 2vm8_A 101 FQGTKAALAGGTTMIIDHV-VPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYM 179 (501)
T ss_dssp HHHHHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEES
T ss_pred HHHHHHHHhCCcEEEEeCC-CCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEee
Confidence 8888999999999999986 444433334555554444333334455544333222223345566666 47888999876
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHH
Q 010547 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 277 (507)
.+.. ....+.+++.++++.|++++.++.+|++....+...+.... ..+......+....|+..+..++.+.+.+..
T Consensus 180 ~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~ 255 (501)
T 2vm8_A 180 AFKD---RFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRIL-DLGITGPEGHVLSRPEEVEAEAVNRAITIAN 255 (501)
T ss_dssp SSTT---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-TTTCCSTHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ccCC---CCCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHH-hcCCCChhhccccCCHHHHHHHHHHHHHHHH
Confidence 5432 13578999999999999999999999987543322222111 2222222233334566677778888888887
Q ss_pred hhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCC----CCceeEcCCCCCh-hhHHH
Q 010547 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDA-ANKEK 352 (507)
Q Consensus 278 ~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~-~~~~~ 352 (507)
.. +.++|+.|+.+. ...+.++.+++.|+.+.++.+++++.++...+... +..++.+||+|.. .....
T Consensus 256 ~~-------g~~~hi~h~~~~-~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~ 327 (501)
T 2vm8_A 256 QT-------NCPLYITKVMSK-SSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDF 327 (501)
T ss_dssp HH-------TCCEEEEEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHH
T ss_pred Hh-------CCcEEEEeCCcH-HHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHH
Confidence 66 888999999987 77999999999999888888888887776554321 1235567888865 56788
Q ss_pred HHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHhCC-C
Q 010547 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLAGQ-V 430 (507)
Q Consensus 353 ~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~gls~~~al~~~T~n~A~~lgl-~ 430 (507)
+++++.+|+.+++|||+.+++...++...+.|...+.|+.+.+..+..++....+ .+++++++++++|.|||++||+ +
T Consensus 328 l~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~ 407 (501)
T 2vm8_A 328 LNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYP 407 (501)
T ss_dssp HHHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred HHHHHhcCceEEEEecCCCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCC
Confidence 8999999999999999998877666554556777778889999888877766544 4799999999999999999999 6
Q ss_pred CCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc-CCCCCccccc
Q 010547 431 SKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA-PAACGSPILA 506 (507)
Q Consensus 431 ~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~-~~~~~~~~~~ 506 (507)
++|+|++|+.||||++|.+..+.++.. .+.+... ++||.+....+.|..||++|++||++|+++ ...+|++++.
T Consensus 408 ~~G~l~~G~~ADlvv~d~~~~~~~~~~-~~~s~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l~~ 482 (501)
T 2vm8_A 408 RKGRIAVGSDADLVIWDPDSVKTISAK-THNSSLE-YNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPR 482 (501)
T ss_dssp TSSCCCTTSBCCEEEEEEEEEEECCTT-TSSSSCS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred CCCccCCCCcCCEEEEcCCCCeeeccc-ccccccc-CCCccCcEeCceEEEEEECCEEEEECCeEccCCCCCceecC
Confidence 799999999999999999988888766 6677777 999999999999999999999999999998 6778999975
No 13
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-49 Score=409.99 Aligned_cols=450 Identities=22% Similarity=0.284 Sum_probs=342.7
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCC-CCCCcEEecCCCEEecceeecccccCCCCC--CCCCCh
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGF 118 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~-~~~~~viD~~g~~v~PGfID~H~H~~~~~~--~~~~~~ 118 (507)
+.+++|+|++|++++...+++|+|+||||++|++....+.. +.+.++||++|++|+|||||+|+|+..+.. ...+++
T Consensus 26 ~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~~ 105 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDDF 105 (541)
T ss_dssp -CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCCT
T ss_pred cCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHHH
Confidence 46899999999998887789999999999999986432210 012389999999999999999999976532 245678
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHH-cCCcEEEEcc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFM 197 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 197 (507)
....+.++++||||++++. ...+.....+.+............+++.++.......+...+++.++.+ .|+..++.|+
T Consensus 106 ~~~~~~al~~GvTtv~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~ 184 (541)
T 2vr2_A 106 HQGTKAALSGGTTMIIDFA-IPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFM 184 (541)
T ss_dssp THHHHHHHTTTEEEEEEEE-CCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEES
T ss_pred HHHHHHHHhCCeeeecccc-CCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 8888999999999999975 2222223344454444434444556666655443333344556666664 6888999887
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHH
Q 010547 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 277 (507)
.+. +....+++++.++++.|++++.++.+|+++...+...+.... ..+......+....|+..+..++.+.+.++.
T Consensus 185 ~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~-~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~ 260 (541)
T 2vr2_A 185 AYK---DLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKML-ALGITGPEGHELCRPEAVEAEATLRAITIAS 260 (541)
T ss_dssp SST---TTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred ccC---CccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-HcCCCChhhccccchhHHHHHHHHHHHHHHH
Confidence 543 223578999999999999999999999987654332222111 1222222222334566677777777788777
Q ss_pred hhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCC----CCCceeEcCCCCC-hhhHHH
Q 010547 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKEK 352 (507)
Q Consensus 278 ~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~-~~~~~~ 352 (507)
.. +.++|+.|+.+. ...+.++.+++.|+.+.++.+++++.++...+.. ....++.+||+|. ...++.
T Consensus 261 ~~-------~~p~~~~h~ss~-~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~ 332 (541)
T 2vr2_A 261 AV-------NCPLYIVHVMSK-SAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDF 332 (541)
T ss_dssp HH-------TCCEEEEEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHH
T ss_pred Hh-------CCCEEEEeCCCH-HHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHH
Confidence 66 788999999887 7888999999999999888899888777654432 1233567899986 667888
Q ss_pred HHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-C
Q 010547 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-V 430 (507)
Q Consensus 353 ~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~ 430 (507)
+++++.+|...+++||+.++....+....+.|...+.|+.+++..+..++.... ..+++++++++++|.|||++||+ +
T Consensus 333 l~~~l~~g~~~~~gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~ 412 (541)
T 2vr2_A 333 LMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYP 412 (541)
T ss_dssp HHHHHHTTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred HHHHHhcCCeEEEEeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCC
Confidence 999999999999999999998877766566899999999999998888777554 44699999999999999999999 6
Q ss_pred CCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCccc-CCCCCccccc
Q 010547 431 SKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA-PAACGSPILA 506 (507)
Q Consensus 431 ~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~-~~~~~~~~~~ 506 (507)
++|+|++|++||||+||.+..+.++.. .+.++.. ++||.+....|.|..||++|++||++|+++ ....|++++-
T Consensus 413 ~~G~i~~G~~ADlvv~d~~~~~~~~~~-~~~~~~~-~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 487 (541)
T 2vr2_A 413 RKGRIAVGSDADIVIWDPKGTRTISAK-THHQAVN-FNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPR 487 (541)
T ss_dssp TSSCCSTTSBCCEEEEEEEEEEECCTT-TCSSSCS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCSCBCCC
T ss_pred CCCccCCCCCCCEEEEcCCcCeEeCHH-HhhcccC-CCccCCCEEeeeEEEEEECCEEEEECCeeccCCCCceEecC
Confidence 799999999999999999888877766 6677777 999999999999999999999999999998 5678999874
No 14
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=3e-49 Score=404.00 Aligned_cols=440 Identities=26% Similarity=0.342 Sum_probs=343.7
Q ss_pred ceEEEEecEEECCCCceeeeEEEeCCEEEEeec-CCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHH
Q 010547 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS-EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~-~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 121 (507)
++++|+|++|++++++.+++|+|+||+|++|++ .......+.+.++||++|++|+|||||+|+|+..++..+.+++...
T Consensus 4 m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~e~~~~~ 83 (452)
T 2gwn_A 4 MKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREPGLTHKATIASE 83 (452)
T ss_dssp SEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHH
T ss_pred ccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCCCCCcHHHHHHH
Confidence 468999999999887778999999999999997 5432100125689999999999999999999987766667788888
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCC
Q 010547 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (507)
Q Consensus 122 ~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (507)
.+.++++||||+++++ .+.|.....+.+....+.+.....+++.++++.... ..+.+.++...|..+++.++....
T Consensus 84 ~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~g~~g~k~~~~~~~ 159 (452)
T 2gwn_A 84 SRAAVAGGVTSFMDMP-NTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTND---NIDEIKRVDKHLVPGLKLFLGSST 159 (452)
T ss_dssp HHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSS---CHHHHHTCCTTSCSCEEEESSSCC
T ss_pred HHHHHhCCeEEEEcCC-CCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCC---CHHHHHHHHHcCCCEEEEEeccCC
Confidence 9999999999999998 666766778888777777766677788777665543 234555555568889999875432
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc-cccccccCCCChhHHHHHHHHHHHHHHhhc
Q 010547 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT-RSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (507)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 280 (507)
...+..+.+.+++.++ +.+.++..|++....+...+.......+. .....+...+|...+.+.+.+.++++.+.
T Consensus 160 -~~~~~~~~~~~~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~~- 234 (452)
T 2gwn_A 160 -GNMLVDNKETLEKIFG---ECDLLIATHCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAERM- 234 (452)
T ss_dssp -GGGBCCCHHHHHHHHH---HCCSCEEEECCCHHHHHHHHHHHHHHHCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHHH-
T ss_pred -CCcccCCHHHHHHHHH---HcCCEEEEcCCCHHHHHhHHhhhhhhcCcccchhhccccCChHHHHHHHHHHHHHHHHh-
Confidence 1234456666666554 45888899998765544332100000110 11122334567778888999999999987
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHH---HHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHH
Q 010547 281 TDGPAEGAHLHIVHLSDASSSLDLLME---AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL 357 (507)
Q Consensus 281 ~~~~~~g~~~~~~h~~~~~~~~~~i~~---~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 357 (507)
+.++|+.|+++. ...+.+.+ .++. ++++++++|++.++.+++...+..+..+|+++.......+++++
T Consensus 235 ------g~~v~i~H~~~~-~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~~g~~~~~~P~lr~~~~~~~l~~~l 305 (452)
T 2gwn_A 235 ------NARLHILHLSTE-KELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREALRAAV 305 (452)
T ss_dssp ------TCCEEECCCCCT-GGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHH
T ss_pred ------CCCEEEEeCCCH-HHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHH
Confidence 888999999865 66666665 2433 56778899999998887765677788899999988999999999
Q ss_pred hcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCcccc
Q 010547 358 MDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAI 437 (507)
Q Consensus 358 ~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~ 437 (507)
++|+++++|||+.+++...+ ..+|+..+.|+.+++..+..++....+.+++++++++++|.|||++||++++|+|++
T Consensus 306 ~~Gv~~~lgTD~~~~~~~~k---~~~~~~~~~g~~~~e~~~~~~~~~~~~~~ls~~~~l~~~T~~~A~~lgl~~~G~l~~ 382 (452)
T 2gwn_A 306 RNGRIDIIATDHAPHLLREK---EGSCLQAASGGPLVQHSLLALLELCNQGIFSIEEIVSKTAHIPATLFAIEKRGYIRP 382 (452)
T ss_dssp HHSSSCEEECCBCCCCHHHH---CSCTTTSCCCCCCTTTHHHHHHHHHHTTSSCHHHHHHHHTHHHHHHHTBTTCSSCCT
T ss_pred HCCCceEEEeCCCCCChHHh---cCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHcCCCCCCcccC
Confidence 99999999999988876543 246888888999999888877765556789999999999999999999966899999
Q ss_pred CCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCC-CCCcccc
Q 010547 438 GNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPIL 505 (507)
Q Consensus 438 G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~-~~~~~~~ 505 (507)
|+.|||+++|.+.++.++.. .+.++.. ++||.+....+.|..||++|++||++|+++.. ..|++++
T Consensus 383 G~~ADlvv~d~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~ 449 (452)
T 2gwn_A 383 GYYADLVLVDPSSPHTVSAD-NILSLCG-WSPFEGFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPLF 449 (452)
T ss_dssp TSBCCEEEEETTSCEECCTT-TCCSTTC-CCTTTTCEESCEEEEEEETTEEEEETTEECSSCCCCCBCC
T ss_pred CCcCCEEEEcCCCCeEECHH-HccccCC-CCCCCCcEEeeeEEEEEECCEEEEECCeeccCCCCceeeC
Confidence 99999999999988888776 6777777 99999999999999999999999999999876 7899986
No 15
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-47 Score=388.92 Aligned_cols=422 Identities=29% Similarity=0.399 Sum_probs=321.8
Q ss_pred EEEEecEEECCCC-ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhHHHH
Q 010547 45 YWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK 123 (507)
Q Consensus 45 ~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~ 123 (507)
++|+|++|+++++ ..+++|+|+||+|++|++. + +.++||++|++|+|||||+|+|+...+..+.+.+....+
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~---~----~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~ 74 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG---E----AKQVVDGTGCFLAPGFLDLHAHLREPGEEVKEDLFSGLL 74 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC---C----CSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC---C----CceEEeCCCCEEecCEEEeccccCCCCCCchHHHHHHHH
Confidence 6899999999876 4589999999999999875 1 468999999999999999999998765555677888889
Q ss_pred HHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-CcccHHHHHHHHHcCCcEEEEcccCCCC
Q 010547 124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGI 202 (507)
Q Consensus 124 ~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (507)
.++++||||+++++ .+.|.....+.+....+.......+++...+++... .+...+++.++.+.|+.+++.
T Consensus 75 ~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~i~~------- 146 (426)
T 2z00_A 75 AAVRGGYTDLVSMP-NTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLREAGAVLLTD------- 146 (426)
T ss_dssp HHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHHHHTCCEEEC-------
T ss_pred HHHhCCccEEEecC-CCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHHHcCCEEEEC-------
Confidence 99999999999997 555555556666666665554332444333333221 112233455555667777753
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccC
Q 010547 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTD 282 (507)
Q Consensus 203 ~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~ 282 (507)
+..+..+.+.+.++++.|++++.++.+|+++...+..... ..+......+...+|...+...+.+.++++.+....
T Consensus 147 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~ 222 (426)
T 2z00_A 147 DGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVM----NDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRR 222 (426)
T ss_dssp TTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSE----ECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhh----ccCccchhcccccCChHHHHHHHHHHHHHHhhcccc
Confidence 3334678999999999999999999999987554321111 111222223344566666766777777777650000
Q ss_pred CCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCe
Q 010547 283 GPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI 362 (507)
Q Consensus 283 ~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 362 (507)
. ..+.++++.|++.. ...+.++.+++.|+.+++++||+++.++.+.+...+...+..|+++....+..+++++.+|++
T Consensus 223 ~-~~g~~~~i~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~~ 300 (426)
T 2z00_A 223 S-PATPRLHVQHLSTK-RGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTL 300 (426)
T ss_dssp C-SSCCCEEETTCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTSS
T ss_pred c-cCCCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCCc
Confidence 0 02778999999986 778999999999999999999999888776665556667788999998889999999999999
Q ss_pred eEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCC
Q 010547 363 DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHA 441 (507)
Q Consensus 363 ~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~A 441 (507)
++++||+.|+....+. .+|+..+.|+.+.+..++.++.. ....++|++++++++|.|||++||++ +|+|++||.|
T Consensus 301 ~~lgsD~~p~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~-~G~l~~G~~A 376 (426)
T 2z00_A 301 DAIATDHAPHTLAEKE---KDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP-PLHLEEGAEA 376 (426)
T ss_dssp CEECCCBCCCCTTGGG---SCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC-CCCSSTTSBC
T ss_pred EEEecCCCCCCHHHcc---CChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC-cccccCCCCC
Confidence 9999999877655432 36777777888888877776664 34557999999999999999999997 9999999999
Q ss_pred cEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCc
Q 010547 442 DLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 442 Dlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
||||+|. .++.++.. .+.+... ++||.+....+.|..||++|++||++++
T Consensus 377 Dlvv~d~-~~~~~~~~-~~~~~~~-~~p~~g~~~~~~v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 377 SLVLLSP-KERPVDPS-AFASKAR-YSPWAGWVLGGWPVLTLVAGRIVHEALK 426 (426)
T ss_dssp CEEEEEC-CCEECCGG-GCSSSCC-CCTTTTCEECCEEEEEEETTEEEEECCC
T ss_pred CEEEEeC-CcEEEcHH-HccccCC-CCCcCCCEEEEEEEEEEECCEEEEecCC
Confidence 9999998 66777665 6666777 9999999999999999999999999875
No 16
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=5.2e-47 Score=389.30 Aligned_cols=421 Identities=27% Similarity=0.401 Sum_probs=290.5
Q ss_pred CCCcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCC
Q 010547 39 LLPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE 116 (507)
Q Consensus 39 ~~~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~ 116 (507)
.+++++++|+|++|+++++ +.+++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+...+..+.+
T Consensus 43 ~~~mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~iD~~g~~v~PGlID~H~H~~~~~~~~~~ 118 (467)
T 1xrt_A 43 DRWMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNILV----PEAEIIDAKGLIVCPGFIDIHVHLRDPGQTYKE 118 (467)
T ss_dssp ---CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCCC----SSEEEEECTTSEEEECEEEEEECCCTTTCTTTC
T ss_pred ccceeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCCC----CCCcEEeCCCCEEccCEEEEeecccCCCCCchh
Confidence 3556678999999998765 4589999999999999976431 256899999999999999999999876555567
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-CcccHHHHHHHHHcCCcEEEE
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKS 195 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 195 (507)
.+....+.++++||||+++++ .+.+.....+.+....+.......+++...+++... .....+++.++.+.|+.+++.
T Consensus 119 ~~~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~g~~~i~~ 197 (467)
T 1xrt_A 119 DIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFTD 197 (467)
T ss_dssp CHHHHHHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHHHHTCCCBCC
T ss_pred hHHHHHHHHHhCCeEEEEecC-CCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHHHcCCEEEEc
Confidence 788888999999999999997 555555556666666665554433455554433221 112233445555556554432
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHH
Q 010547 196 FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l 275 (507)
.+.+..+.+.++++++.|++++.++.+|+++...+...+ +.+......+....+...+...+.+.+.+
T Consensus 198 -------~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l-----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~ 265 (467)
T 1xrt_A 198 -------DGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI-----NEGEVSALLGLSSRAPEAEEIQIARDGIL 265 (467)
T ss_dssp -------TTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC-------------------------CHHHHHHHHHHH
T ss_pred -------CCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH-----hcCccchhcccccCChHHHHHHHHHHHHH
Confidence 233467899999999999999999999998755432111 11111122223344544555566666666
Q ss_pred HHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHH
Q 010547 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWE 355 (507)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 355 (507)
.... +.++|+.|++.. ...+.++.+++.|+.+++.+||+++.++.+.+...+...+..|++|.......+++
T Consensus 266 ~~~~-------g~~~hi~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~ 337 (467)
T 1xrt_A 266 AQRT-------GGHVHIQHVSTK-LSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIE 337 (467)
T ss_dssp HHHH-------CCEEEESCCCSH-HHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHH
T ss_pred HHHh-------CCCEEEEeCCCH-HHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHH
Confidence 6654 888999999986 67999999999999889999999988877766555666778888888888889999
Q ss_pred HHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcC-CCHHHHHHHHhhchhHHhCCCCCCc
Q 010547 356 ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAGQVSKGA 434 (507)
Q Consensus 356 ~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g-ls~~~al~~~T~n~A~~lgl~~~G~ 434 (507)
++++|+++++|||+.++....+. .|...+.|+.+.+..+..++. ..+.| +|++++++++|.|||++||++ +|+
T Consensus 338 ~l~~Gv~~~lgTD~~~~~~~~~~----~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~lgl~-~G~ 411 (467)
T 1xrt_A 338 GVKRGIIDCFATDHAPHQTFEKE----LVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARIIGVD-LGT 411 (467)
T ss_dssp HHHHTCSCEECCCBCCCCC---------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTCS-CSC
T ss_pred HHhCCceEEEeeCCCCCChhHhc----ccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHHhCCC-ccc
Confidence 99999999999999877554321 255666788888877776666 55666 999999999999999999997 999
Q ss_pred cccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 435 IAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 435 I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
|++||.||||++|.++.+.++.. .+.++.. ++||.++...+.|..||++|++||+|
T Consensus 412 I~~G~~ADlvvld~~~~~~i~~~-~~~~~~~-~~p~~g~~~~~~V~~viv~G~~v~~~ 467 (467)
T 1xrt_A 412 LKLGSPADITIFDPNKEWILNEE-TNLSKSR-NTPLWGKVLKGKVIYTIKDGKMVYKD 467 (467)
T ss_dssp CCTTSBCCEEEEEEEEEEECSTT-TCCSSCC-CCTTTTCEEEEEEEEEEETTEEEEEC
T ss_pred ccCCCCCCEEEEeCCCCEEEChH-HccCcCC-CCCccCCEEeEEEEEEEECCEEEecC
Confidence 99999999999999888887766 6666777 89999998899999999999999975
No 17
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=2.3e-41 Score=347.58 Aligned_cols=394 Identities=19% Similarity=0.206 Sum_probs=279.5
Q ss_pred CCcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG 117 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~ 117 (507)
.++++++|+|++|+|+++ ...++|+|+||||++|++.... .+.++||++|++|+|||||+|+|+........
T Consensus 4 ~~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~-- 77 (480)
T 3gip_A 4 AEKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGAH----PARHAWDASGKIVAPGFIDVHGHDDLMFVEKP-- 77 (480)
T ss_dssp -CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTTS----CEEEEEECTTSEEEECEEESSCCCTTHHHHST--
T ss_pred cccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCCC----CCCeEEECCCCEEccCEEeccccccccccCCh--
Confidence 456789999999999887 4689999999999999986532 26789999999999999999999865311111
Q ss_pred hhHHHHHHHhCCceEEEeCCC--------CCCCCCCC---------HHHHHHHHHHHh-cCceeeEEEecccc-------
Q 010547 118 FPSGTKAAAAGGITTLIDMPL--------NSDPSTIS---------TETLKLKVDAAE-KRIYVDVGFWGGLV------- 172 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~--------~~~p~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~------- 172 (507)
.....+++||||+++..+ .+.|.... .+.+..+.+.+. .+..+++.++.+..
T Consensus 78 ---~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~ 154 (480)
T 3gip_A 78 ---DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAM 154 (480)
T ss_dssp ---TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHC
T ss_pred ---hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhc
Confidence 123558999999998421 11111111 133555555544 45677887765442
Q ss_pred -----CCCcccHHHHHHHH----HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhc
Q 010547 173 -----PENAYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKL 243 (507)
Q Consensus 173 -----~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 243 (507)
...++..+++.++. +.|+.+++.++.+... ...+.+++.++.+.+++++.++.+|+++...
T Consensus 155 g~~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~---~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~------- 224 (480)
T 3gip_A 155 RDPQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPG---AVAQAAELEGLARVAAERRRLHTSHIRNEAD------- 224 (480)
T ss_dssp SSTTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTG---GGCCHHHHHHHHHHHHHTTCEEEEECSCSST-------
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCc---ccCCHHHHHHHHHHHHHcCCEEEEEecCccc-------
Confidence 11223344444444 6899999997654311 1358899999999999999999999976432
Q ss_pred ccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC--------hhHHHHHHHHHHhCCCCE
Q 010547 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD--------ASSSLDLLMEAKTNGDSI 315 (507)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~--------~~~~~~~i~~~~~~g~~i 315 (507)
.+.+++.+.+.++++. |.++|+.|++. ....++.++.+++.|+.+
T Consensus 225 --------------------~~~~a~~e~i~la~~~-------g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~V 277 (480)
T 3gip_A 225 --------------------GVEAAVEEVLAIGRGT-------GCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEV 277 (480)
T ss_dssp --------------------THHHHHHHHHHHHHHH-------CCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCE
T ss_pred --------------------cHHHHHHHHHHHHHHh-------CCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCce
Confidence 3566788889998876 89999999983 228999999999999999
Q ss_pred EEecccccccccccCCCCCCCceeEc-------CCCCC-----------hhhHHHHHHH-----------------HhcC
Q 010547 316 TVETCPHYLAFSAEEIPDGDTRFKCA-------PPIRD-----------AANKEKLWEA-----------------LMDG 360 (507)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~~~-----------~~~~~~~~~~-----------------l~~G 360 (507)
+++++|+++.++...+.......+.. |+++. ....+.+.++ +.++
T Consensus 278 t~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~ 357 (480)
T 3gip_A 278 ALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQH 357 (480)
T ss_dssp EEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHS
T ss_pred EEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcC
Confidence 99999999999887776655555555 66632 1222333322 3334
Q ss_pred CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HH-hcCCCHHHHHHHHhhchhHHhCCCCCCccccC
Q 010547 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAIG 438 (507)
Q Consensus 361 ~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G 438 (507)
....+|||+.+.... ........++.++.. .+ ...+|++++++++|.|||++||++++|+|++|
T Consensus 358 ~~~~~gsD~~~~~~~--------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~~g~~~~G~l~~G 423 (480)
T 3gip_A 358 PCCMVGSDGLPNDAR--------------PHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGFAERGVLQPG 423 (480)
T ss_dssp TTEEECCCCCTTCSS--------------CCTHHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHHHTCTTCSSCSTT
T ss_pred CCeEEecCCcccCCC--------------CChhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Confidence 455778887654321 111222334555543 33 24599999999999999999999667999999
Q ss_pred CCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCccccc
Q 010547 439 NHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILA 506 (507)
Q Consensus 439 ~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~~ 506 (507)
+.|||+++|++..++.. ....+ ....+.|..||++|++||++|++++ .+|++||.
T Consensus 424 ~~AD~vv~d~~~~~~~~-----~~~~~-------~~~~~~v~~v~v~G~~v~~~g~~~~-~~G~~lr~ 478 (480)
T 3gip_A 424 AWADVVVFDPDTVADRA-----TWDEP-------TLASVGIAGVLVNGAEVFPQPPADG-RPGQVLRA 478 (480)
T ss_dssp SBCCEEEECTTTCBCCC-----CSSST-------TCCCBSEEEEEETTEEEESSCCSSS-CCCCBCCC
T ss_pred CCCCEEEEcCccccCcc-----ccccc-------cccCCCccEEEECCEEEEECCeEcC-CCCcCcCC
Confidence 99999999998754321 11222 2223569999999999999999999 99999985
No 18
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=1.6e-37 Score=321.03 Aligned_cols=391 Identities=16% Similarity=0.155 Sum_probs=259.9
Q ss_pred ceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCChhH
Q 010547 43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS 120 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~ 120 (507)
++++|+|++|+++++ ..+++|+|+||||++|++.... .+.++||++|++|+|||||+|+|+..+.... .
T Consensus 21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~~-----~ 91 (496)
T 1rk6_A 21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSAS----SARRRIDVAGKVVSPGFIDSHTHDDNYLLKH-----R 91 (496)
T ss_dssp BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTTS----CBSCEEECTTCEEEECEEESSCCCTTHHHHC-----T
T ss_pred ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCCC----CCCeEEeCCCCEEecCEeeeeecCCcccccc-----H
Confidence 468999999999876 4688999999999999976421 2568999999999999999999987642211 2
Q ss_pred HHHHHHhCCceEEEeCCCC--CCCCC--C--------------CHHHHHHHHHHHhc-CceeeEEEeccc----------
Q 010547 121 GTKAAAAGGITTLIDMPLN--SDPST--I--------------STETLKLKVDAAEK-RIYVDVGFWGGL---------- 171 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~--~~p~~--~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~---------- 171 (507)
..+.++++||||+++++++ ..|.. + ....+....+.+.. ...+++....+.
T Consensus 92 ~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~ 171 (496)
T 1rk6_A 92 DMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPD 171 (496)
T ss_dssp TCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSC
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhccCCccceEEecccccceeeeccc
Confidence 3467899999999987532 22321 1 01223333333332 333444332211
Q ss_pred cCC--CcccHHH----HHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhccc
Q 010547 172 VPE--NAYNASA----LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (507)
Q Consensus 172 ~~~--~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 245 (507)
... .....+. +++..+.|+.+++....+.. .+..+.+++.++++.+++++.++.+|+++...
T Consensus 172 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~---~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~--------- 239 (496)
T 1rk6_A 172 LRREATADEIQAMQALADDALASGAIGISTGAFYPP---AAHASTEEIIEVCRPLITHGGVYATHMRDEGE--------- 239 (496)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGG---GTTCCHHHHHHHHTHHHHHTCEEEEECSCSST---------
T ss_pred cccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCC---CCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc---------
Confidence 011 1122223 33334688888876432210 12457889999999999999999999964321
Q ss_pred CcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC--------hhHHHHHHHHHHhCCCCEEE
Q 010547 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD--------ASSSLDLLMEAKTNGDSITV 317 (507)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~--------~~~~~~~i~~~~~~g~~i~~ 317 (507)
.+.+.+.+.++++.+. |.++|+.|+.. .+...+.++.++..| .+++
T Consensus 240 ------------------~~~~~l~~~~~~a~~~-------g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~ 293 (496)
T 1rk6_A 240 ------------------HIVQALEETFRIGREL-------DVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSL 293 (496)
T ss_dssp ------------------THHHHHHHHHHHHHHH-------TSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEE
T ss_pred ------------------cHHHHHHHHHHHHHHc-------CCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEE
Confidence 3556677888888876 88899999842 225677888888888 8888
Q ss_pred ecccccccccccCCCCC----CCceeEcCCC--------------CChhhHHHHHHHHhcCC-----------------e
Q 010547 318 ETCPHYLAFSAEEIPDG----DTRFKCAPPI--------------RDAANKEKLWEALMDGH-----------------I 362 (507)
Q Consensus 318 ~~~~~~~~~~~~~~~~~----~~~~~~~p~~--------------~~~~~~~~~~~~l~~G~-----------------~ 362 (507)
+.+++....+...+... +..+..+|+. +.......+++++.+|+ .
T Consensus 294 ~~~~~~~~~~~~~~~~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~ 373 (496)
T 1rk6_A 294 DAYPYVAGSTMLKQDRVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGP 373 (496)
T ss_dssp EECSCSCEEEECCCCTTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTT
T ss_pred EEeccCCCCCcccHHHhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCC
Confidence 87876655443333221 1333334432 22334566677888887 5
Q ss_pred eEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-h-cCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 363 DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-K-YGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 363 ~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
+++|||+.+++... .......++.++.... + ..+|++++++++|.|||++||++++|+|++|+.
T Consensus 374 ~~iGTD~~~~~~~~--------------~~~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl~~~G~i~~G~~ 439 (496)
T 1rk6_A 374 TMIGSDGLPHDERP--------------HPRLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERGQVQPGYY 439 (496)
T ss_dssp EEECCCCCTTCSSC--------------CTHHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCSSCCTTSB
T ss_pred EEEecCCCCCCCCC--------------CchhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCc
Confidence 79999987653110 0111222333333223 2 349999999999999999999966899999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCccccc
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILA 506 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~~~ 506 (507)
|||+++|++...+.+. + .+++ ...+.|..||++|++||++|++++.+.|++++.
T Consensus 440 ADlv~~d~~~~~~~~~---~------~~~~---~~~~~v~~v~v~G~~v~~~g~~~~~~~g~~l~~ 493 (496)
T 1rk6_A 440 ADLVVFDPATVADSAT---F------EHPT---ERAAGIHSVYVNGAAVWEDQSFTGQHAGRVLNR 493 (496)
T ss_dssp CCEEEECTTTCBCCCC---S------SSTT---CCCBSEEEEEETTEEEEETTEECSCCCCCBCCC
T ss_pred ccEEEEcCcccccccc---c------cccc---ccCCCceEEEECCEEEEECCeeccCCCceEeec
Confidence 9999999886432211 0 1222 123569999999999999999999999999874
No 19
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.9e-37 Score=299.67 Aligned_cols=327 Identities=20% Similarity=0.207 Sum_probs=262.8
Q ss_pred CCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCce-eeEEEecc
Q 010547 92 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWGG 170 (507)
Q Consensus 92 ~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 170 (507)
.|++|+||+||+|+|+.. +. .......++++||||++++| ++.|.....+.+....+.+..... +++.++++
T Consensus 22 ~~~~vlPG~ID~HvHlre-G~-----~~~e~~aA~aGG~Ttvi~mP-nt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~~ 94 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD-NQ-----MLELIAPLSARDFCAAVIMP-NLIPPLCNLEDLKAYKMRILKACKDENFTPLMT 94 (359)
T ss_dssp SCCEEEESCEEEEECCCS-HH-----HHHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCcEEccCcEEccccCCC-CC-----cchhHHHHHhCCCcEEEECC-CCCCCCCcHHHHHHHHHHHhccCCCceEEEeee
Confidence 489999999999999987 32 23344588899999999999 899999999999988888776666 88888887
Q ss_pred --ccCCCcccHHHHHHHHHcCCcEEEEcccCCC---CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhccc
Q 010547 171 --LVPENAYNASALEALLNAGVLGLKSFMCPSG---INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (507)
Q Consensus 171 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 245 (507)
+. ....+++.++.+. +.++|.|+.... ..+.+..+.+.++++++.++++|.++.+|+|+...+.
T Consensus 95 l~lt---~~~~~el~~l~~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~------- 163 (359)
T 3pnu_A 95 LFFK---NYDEKFLYSAKDE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM------- 163 (359)
T ss_dssp EECS---CCCHHHHHHHTTT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-------
T ss_pred eEec---CCCHHHHHHHHHh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-------
Confidence 65 2245677777766 889999874311 1233455899999999999999999999999876421
Q ss_pred CcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccc
Q 010547 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325 (507)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~ 325 (507)
..|..++.+.+.++++ .+|.++|+.|++++ +++++++.+ .++++++||||+.
T Consensus 164 -----------------~~E~~ai~r~~~la~~------~~g~~lhi~HvSt~-~~v~~I~~A----~~VtaEv~phhL~ 215 (359)
T 3pnu_A 164 -----------------DRESNFAKIYEKLAKH------FPRLKIVMEHITTK-TLCELLKDY----ENLYATITLHHLI 215 (359)
T ss_dssp -----------------GTTGGGHHHHHHHHHH------CTTSCEEECSCCSH-HHHHHHHHC----TTEEEEECSGGGT
T ss_pred -----------------HHHHHHHHHHHHHHHH------cCCCcEEEEecCcH-HHHHHHHhc----CCceEEEechhhE
Confidence 0244567788888875 34889999999998 999999886 6799999999999
Q ss_pred ccccCCC--CCCCceeEcCCCCChhhHHHHHHHHhcCCee-EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHH
Q 010547 326 FSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 402 (507)
Q Consensus 326 ~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~-~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 402 (507)
++.+++. ..++.++++||+|...+++.+++++.+|.++ +++||++|+...+|... | ...|+.+++..++.++
T Consensus 216 lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~~---~--g~~Gi~~~~~~L~l~~ 290 (359)
T 3pnu_A 216 ITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKECC---G--CAAGVFSAPVILPVLA 290 (359)
T ss_dssp CCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC---------C--CCSCBCCGGGHHHHHH
T ss_pred EcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCCC---C--CCCChhhHHHHHHHHH
Confidence 9999875 3588999999999999999999999999999 79999999988876432 2 3568888888888877
Q ss_pred HHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccc-cCcEEeeEEE
Q 010547 403 SYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAY-LGRRLSGKVL 480 (507)
Q Consensus 403 ~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~ 480 (507)
... +.+++++++++.+|.|||+++|++. .+| |||+|+| ..|.++.. .+.++.. ++|| .|..+.|+|.
T Consensus 291 ~~~-~~~~~l~~lv~~~s~nPAki~gL~~----~~G--Adlvl~d--~~~~v~~~-~~~s~~~-~tPf~~G~~l~G~v~ 358 (359)
T 3pnu_A 291 ELF-KQNSSEENLQKFLSDNTCKIYDLKF----KED--KILTLEE--KEWQVPNV-YEDKYNQ-VVPYMAGEILKFQLK 358 (359)
T ss_dssp HHH-HHHSCHHHHHHHHTHHHHHHHTCCC----SSC--CEEEEEC--CCEECCSC-EECSSCE-ECCTTTTCEESCEEC
T ss_pred HHH-hhcCCHHHHHHHHHHhHHHHhCCCC----CCC--CeEEEEe--cCEEeCch-hcccCCC-ccccCCCCEEEEEEe
Confidence 755 4456999999999999999999932 134 9999999 67888877 7788888 9999 9999988874
No 20
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=3.7e-36 Score=309.97 Aligned_cols=383 Identities=15% Similarity=0.127 Sum_probs=228.2
Q ss_pred CCCCcceEEEEecEEE-CCC--C--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 38 SLLPYNQYWLTSKRIV-TPK--G--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 38 ~~~~~~~~~i~n~~i~-~~~--~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..+++.+++|+|++++ +++ . +.+++|+|+||||++|++..+.+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 24 ~~~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~ 101 (479)
T 3h4u_A 24 SSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP--ETADEVLDLRGHLVIPGLVNTHHHMYQSLT 101 (479)
T ss_dssp -----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC--SCCSEEEECTTEEEEECEEECCCCGGGGGS
T ss_pred ccchhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC--CCCCeEEeCCCCEEecceeecccccchhhh
Confidence 3456788999999965 443 2 45899999999999999876544 236899999999999999999999975422
Q ss_pred CCC------------------------CCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceee
Q 010547 113 TEW------------------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (507)
Q Consensus 113 ~~~------------------------~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (507)
... +.+ ......++++||||+.++. ...+.........+..+....+....
T Consensus 102 rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~g~r~~~~ 180 (479)
T 3h4u_A 102 RAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHL-YIYPNGSRLDDSIGAAQRIGMRFHAS 180 (479)
T ss_dssp CSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCB-CCCCTTCCHHHHHHHHHHHTCEEEEE
T ss_pred ccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECc-cccCCcchHHHHHHHHHHcCCEEEEE
Confidence 110 001 1235677899999999985 23333333333333333332222222
Q ss_pred EEEecc------ccC-----CCcccHHHHHHHHHc-------CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCc
Q 010547 165 VGFWGG------LVP-----ENAYNASALEALLNA-------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 165 ~~~~~~------~~~-----~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
...... +.+ ......+...++.+. +...+. +.+ ......+++.++++++.|+++|.+
T Consensus 181 ~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~~~~~~e~l~~~~~~A~~~g~~ 255 (479)
T 3h4u_A 181 RGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVV--VAP---CSPFSVSRDLMRDAAVLAREYGVS 255 (479)
T ss_dssp EEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEE--EEE---SCTTSSCHHHHHHHHHHHHHHTCE
T ss_pred eeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEE--Eec---CCCCCCCHHHHHHHHHHHHhcCCC
Confidence 211110 000 011122333333321 222222 211 223457899999999999999999
Q ss_pred EEEecCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHH
Q 010547 227 LLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLL 305 (507)
Q Consensus 227 v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i 305 (507)
+.+|+.+.. .+...+... . ....+.+.+.+ ..+.+..+.|+... ..+.+
T Consensus 256 v~~H~~e~~~~~~~~~~~~--------------------g----~~~~~~~~~~g----~~~~~~~i~H~~~~--~~~~~ 305 (479)
T 3h4u_A 256 LHTHLAENVNDIAYSREKF--------------------G----MTPAEYAEDLG----WVGHDVWHAHCVQL--DDAGI 305 (479)
T ss_dssp EEEEESCSHHHHHC-------------------------------CHHHHHHHTT----CCSTTEEEEECTTC--CHHHH
T ss_pred EEEEeCCCHHHHHHHHHHc--------------------C----CCHHHHHHHcC----CCCCCeEEEEecCC--CHHHH
Confidence 999985433 211111000 0 01122222221 11456778888763 34566
Q ss_pred HHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCcc
Q 010547 306 MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFL 385 (507)
Q Consensus 306 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~ 385 (507)
+.+++.|+.+. +||.......+ ...++.++++.|+.+++|||+.+++...+
T Consensus 306 ~~l~~~g~~v~--~~p~s~~~l~~-------------------~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~-------- 356 (479)
T 3h4u_A 306 GLFARTGTGVA--HCPCSNMRLAS-------------------GIAPVKKMRLAGVPVGLGVDGSASNDGAQ-------- 356 (479)
T ss_dssp HHHHHHTCEEE--ECHHHHHHTTC-------------------CCCCHHHHHHTTCCEEECCCCTTSSCCCC--------
T ss_pred HHHHHcCCeEE--EChhHhhhcCC-------------------CCCCHHHHHHCCCeEEEeCCCCccCCCcC--------
Confidence 67777776554 46642111100 01124677889999999999876432211
Q ss_pred ccCCCCchhhhHHHHHHHHHH-hcC---CCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcc
Q 010547 386 KAWGGISSLQFVLPVTWSYGR-KYG---VTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVH 461 (507)
Q Consensus 386 ~~~~~~~~~~~~l~~~~~~~~-~~g---ls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~ 461 (507)
.++. +........ ..+ ++++++++++|.|||++||++++|+|++||.|||||+|.+..+..+.
T Consensus 357 -------~~~~-~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d~~~~~~~~~----- 423 (479)
T 3h4u_A 357 -------MVAE-VRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAGA----- 423 (479)
T ss_dssp -------HHHH-HHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCSSSSSCSTTSBCCEEEEETTSGGGTTC-----
T ss_pred -------HHHH-HHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCcCCEEEEeCCCCccCCc-----
Confidence 1111 111111111 114 99999999999999999999549999999999999999886443210
Q ss_pred cCCCCCccccCcEE--eeEEEEEEECCEEEEecCcccCCCCCccc
Q 010547 462 MKHPSISAYLGRRL--SGKVLATISRGNLVYKEGNHAPAACGSPI 504 (507)
Q Consensus 462 ~~~~~~~~~~~~~~--~~~V~~v~v~G~~v~~~g~~~~~~~~~~~ 504 (507)
. ++|+.++.. ...|..|||+|++||++|+++..+.++.+
T Consensus 424 ---~-~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~ 464 (479)
T 3h4u_A 424 ---L-HDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVI 464 (479)
T ss_dssp ---T-TSHHHHHHHSSCCCCSEEEETTEEEEETTEECSSCHHHHH
T ss_pred ---c-cCHHHHHHccCCCCcCEEEECCEEEEECCEECCCCHHHHH
Confidence 2 455555544 45799999999999999999987765543
No 21
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=5.8e-36 Score=301.58 Aligned_cols=349 Identities=18% Similarity=0.136 Sum_probs=222.8
Q ss_pred ceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCC-C-
Q 010547 43 NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE-G- 117 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~-~- 117 (507)
.+++|+|++|+|+++ +.+++|+|+||||++|++..+ ..+.+.++||++|++|+|||||+|+|+.......+. .
T Consensus 2 ~~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~--~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~ 79 (403)
T 3gnh_A 2 EIKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGD--AVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSL 79 (403)
T ss_dssp CEEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTS--CCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGG
T ss_pred ccEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCC--CCCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhh
Confidence 368999999999876 357999999999999998763 122378999999999999999999999865433221 1
Q ss_pred ----------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecc-------c---------
Q 010547 118 ----------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-------L--------- 171 (507)
Q Consensus 118 ----------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--------- 171 (507)
....++.++++||||+++++ +. ......+....+...... ..+...+. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~---~~~~~~~~~~~~~g~~~g-pr~~~~~~~~~~~g~~~~~~~~~~~ 154 (403)
T 3gnh_A 80 EYSDRFWSVVQTANAKKTLEAGFTTVRNVG-AA---DYDDVGLREAIDAGYVPG-PRIVTAAISFGATGGHCDSTFFPPS 154 (403)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTEEEEEECC-CS---TTHHHHHHHHHHTTSSCC-CEEEECCSCEESTTSTTSCCSSCGG
T ss_pred cCCHHHHHHHHHHHHHHHHhCCeeEEEeCC-CC---ccccHHHHHHHHCCCCCC-CeEEecCcccccCCCCcccccCchh
Confidence 11234678999999999986 21 112223333333222111 11111111 1
Q ss_pred --------cCCCcccHHHHHHHHHcCCcEEEEcccC-----CCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccch
Q 010547 172 --------VPENAYNASALEALLNAGVLGLKSFMCP-----SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE 238 (507)
Q Consensus 172 --------~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 238 (507)
.....+..+.++++.+.|...+|.+... ..+.+.+..++++++++++.|+++|+++.+|+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~--- 231 (403)
T 3gnh_A 155 MDQKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGAS--- 231 (403)
T ss_dssp GCCCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH---
T ss_pred hcccCCcccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHH---
Confidence 1111223466777788899999987531 122345678999999999999999999999995422
Q ss_pred hhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEe
Q 010547 239 RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 318 (507)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~ 318 (507)
.+...++. |. ..+.|+.. ...+.++.+++.|+.+..
T Consensus 232 -----------------------------~i~~~~~~-----------g~-~~i~H~~~--~~~~~~~~~~~~g~~~~~- 267 (403)
T 3gnh_A 232 -----------------------------GIREAVRA-----------GV-DTIEHASL--VDDEGIKLAVQKGAYFSM- 267 (403)
T ss_dssp -----------------------------HHHHHHHT-----------TC-SEEEECTT--CCHHHHHHHHHHTCEEEC-
T ss_pred -----------------------------HHHHHHHh-----------CC-CEEecCCc--CCHHHHHHHHHCCCEEEe-
Confidence 22333332 22 24677765 334566777777765543
Q ss_pred cccccccccccCCCCCCCceeEcCCC--CC-----hhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCC
Q 010547 319 TCPHYLAFSAEEIPDGDTRFKCAPPI--RD-----AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI 391 (507)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~p~~--~~-----~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~ 391 (507)
++....+...... ....|+. .. ......+.++++.|+++++|||+........
T Consensus 268 -~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~~-------------- 327 (403)
T 3gnh_A 268 -DIYNTDYTQAEGK-----KNGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYPHGDN-------------- 327 (403)
T ss_dssp -CCSTHHHHHHHHH-----HHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTCG--------------
T ss_pred -eechhhhhhhhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCCch--------------
Confidence 3211100000000 0000000 00 0112356678889999999999753322110
Q ss_pred chhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccc
Q 010547 392 SSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAY 470 (507)
Q Consensus 392 ~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~ 470 (507)
...+....+.++|++++++++|.|||++||+ +++|+|++||.||||++|.|+..++
T Consensus 328 -------~~e~~~~~~~gl~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~---------------- 384 (403)
T 3gnh_A 328 -------AKQFAVMVRYGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADV---------------- 384 (403)
T ss_dssp -------GGHHHHHHHTTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCG----------------
T ss_pred -------HHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCH----------------
Confidence 0112344567999999999999999999999 6789999999999999998753221
Q ss_pred cCcEEeeEEEEEEECCEEEEe
Q 010547 471 LGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 471 ~~~~~~~~V~~v~v~G~~v~~ 491 (507)
....+|..||++|++|+.
T Consensus 385 ---~~~~~v~~v~~~G~~v~~ 402 (403)
T 3gnh_A 385 ---TTLEKPVFVMKGGAVVKA 402 (403)
T ss_dssp ---GGGGSCSEEEETTEEEEC
T ss_pred ---HHhcCcCEEEECCEEEeC
Confidence 111368999999999974
No 22
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=4.7e-36 Score=304.44 Aligned_cols=356 Identities=16% Similarity=0.112 Sum_probs=224.9
Q ss_pred cceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC----
Q 010547 42 YNQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---- 114 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~---- 114 (507)
+.+++|+|++|+|+++ ..+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+.......
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~ 79 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVA 79 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHH
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCC---CCCeEEECCCCEEcCCeEeeeeccccccCCchhhc
Confidence 4578999999999864 34789999999999999864332 3789999999999999999999998764311
Q ss_pred -CCC------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccc----------------
Q 010547 115 -WEG------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL---------------- 171 (507)
Q Consensus 115 -~~~------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 171 (507)
.+. .....+.++++||||+++++ +. . ..+....+.....+ ..+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~-----~-~~l~~~i~~~~~~g-pri~~~g~~i~~~~g~~~~~~~~~~ 151 (426)
T 2r8c_A 80 TLPNVLVTLRAVPIMRAMLRRGFTTVRDAG-GA-----G-YPFKQAVESGLVEG-PRLFVSGRALSQTGGHADPRARSDY 151 (426)
T ss_dssp HSCHHHHHHHHHHHHHHHHHTTEEEEEECS-SC-----C-HHHHHHHHTTSSCC-CEEEECCSEEECTTSTTCCCCCSSB
T ss_pred cCCHHHHHHHHHHHHHHHHhCCeEEEEeCC-Cc-----h-HHHHHHHHcCCCCC-CeEEecCCcccCCCCCccccccccc
Confidence 010 11335677999999999986 21 1 13333333221111 111111100
Q ss_pred -------------------cCCCcccHHHHHHHHHcCCcEEEEcccC-----CCCCCCCCCCHHHHHHHHHHHHhcCCcE
Q 010547 172 -------------------VPENAYNASALEALLNAGVLGLKSFMCP-----SGINDFPMTNASHIKEGLSVLARYKRPL 227 (507)
Q Consensus 172 -------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~a~~~~~~v 227 (507)
....++..+.+++..+.|+..+|.+... ..+.+.+..++++++++++.|+++|.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v 231 (426)
T 2r8c_A 152 MPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYV 231 (426)
T ss_dssp CCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCE
T ss_pred ccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEE
Confidence 0111123455677777899999987531 1123344689999999999999999999
Q ss_pred EEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHH
Q 010547 228 LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME 307 (507)
Q Consensus 228 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~ 307 (507)
.+|+.... .+...++. |. ..+.|+.. ...+.++.
T Consensus 232 ~~H~~~~~--------------------------------~i~~al~~-----------G~-~~i~H~~~--~~~~~~~~ 265 (426)
T 2r8c_A 232 LAHAYTPA--------------------------------AIARAVRC-----------GV-RTIEHGNL--IDDETARL 265 (426)
T ss_dssp EEEECSHH--------------------------------HHHHHHHT-----------TC-SEEEECTT--CCHHHHHH
T ss_pred EEEeCChH--------------------------------HHHHHHHc-----------CC-CEEecCCc--CCHHHHHH
Confidence 99995321 22333332 22 24677765 34456777
Q ss_pred HHhCCCCEEEecccccccccccCCCCCCCceeEcCC----CC--ChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhcccc
Q 010547 308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP----IR--DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDE 381 (507)
Q Consensus 308 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~--~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~ 381 (507)
+++.|+.+..........+..... ...+|. +. .......+.++++.|+++++|||+.+.....
T Consensus 266 ~~~~gv~~~pt~~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~----- 334 (426)
T 2r8c_A 266 VAEHGAYVVPTLVTYDALASEGEK------YGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRL----- 334 (426)
T ss_dssp HHHTTCEEECCTHHHHHHHHHTTT------TTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGGGG-----
T ss_pred HHHcCCeEeechHHHHHHhhhccc------cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCcc-----
Confidence 778887653221111111110000 000110 00 1234566788899999999999976322111
Q ss_pred CCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCc
Q 010547 382 GNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPV 460 (507)
Q Consensus 382 ~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~ 460 (507)
+...+....+ .+|++++++++|.|||++||+ +++|+|++||.|||||+|.|+..++. .
T Consensus 335 ----------------~~~e~~~~~~-~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~~~~~----~ 393 (426)
T 2r8c_A 335 ----------------QSDEFRILAE-VLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVD----C 393 (426)
T ss_dssp ----------------TTHHHHHHTT-TSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGG----G
T ss_pred ----------------hHHHHHHHHh-cCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChHhCHH----H
Confidence 0111222333 399999999999999999999 66899999999999999987543221 0
Q ss_pred ccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC
Q 010547 461 HMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
.... ..+|..||++|++|+++++...
T Consensus 394 ~~~~-----------~~~v~~v~~~G~~v~~~~~~~~ 419 (426)
T 2r8c_A 394 LLGQ-----------GEHIPLVMKDGRLFVNELEGHE 419 (426)
T ss_dssp TCSS-----------STTCCEEEETTEEEEETTC---
T ss_pred HhCc-----------CCcceEEEECCEEEeccccccc
Confidence 0010 0268999999999999887654
No 23
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=5.5e-36 Score=307.74 Aligned_cols=375 Identities=14% Similarity=0.096 Sum_probs=225.7
Q ss_pred CCcceEEEEecEEECCCC----------ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCC
Q 010547 40 LPYNQYWLTSKRIVTPKG----------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD 109 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~----------~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~ 109 (507)
.++++++|+|++|+++++ +.+++|+|+||+|++|++... ..+.+.++||++|++|+|||||+|+|+..
T Consensus 20 ~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~--~~~~~~~viD~~g~~v~PGlID~H~H~~~ 97 (468)
T 3lnp_A 20 KAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSS--CQIPATETLDLGQQVLMPGWVNAHGHAAM 97 (468)
T ss_dssp -CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTT--CCCCEEEEEECCSEEEEECEEECSCCGGG
T ss_pred CccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCcc--ccCCCCeEEeCCCcEEEeCeechhhChhh
Confidence 446789999999998753 348999999999999998765 11236789999999999999999999943
Q ss_pred C---CCC---------------------CCCCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 010547 110 P---GRT---------------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI 161 (507)
Q Consensus 110 ~---~~~---------------------~~~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 161 (507)
. +.. +.+.+ ......++++||||+.++. ...+.+.+.......+.
T Consensus 98 ~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-------~~~~~~~~~~~~~g~r~ 170 (468)
T 3lnp_A 98 SLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMY-------FYPQQSGEAALAAGIRA 170 (468)
T ss_dssp GGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC-------SCHHHHHHHHHHHTCEE
T ss_pred hhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-------cCHHHHHHHHHHcCCeE
Confidence 2 110 00111 1234567899999999874 12233333333332222
Q ss_pred eeeEEEeccccCCC----cccHHHHHHHHH--cCCc-----EEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 010547 162 YVDVGFWGGLVPEN----AYNASALEALLN--AGVL-----GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (507)
Q Consensus 162 ~~~~~~~~~~~~~~----~~~~~~~~~~~~--~g~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 230 (507)
........ ..... ....+...++.+ .+.. .++..+.+ ...+..+++.+.++++.|+++|.++.+|
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~~H 246 (468)
T 3lnp_A 171 VCFAPVLD-FPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGP---HAPYTVSDEPLKEITMLSDQLDMPVQIH 246 (468)
T ss_dssp EEEEEECS-SCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEE---CCTTTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEeccccC-CCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEc---CCCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 22222211 11111 111222222222 1211 22222222 3334678999999999999999999999
Q ss_pred cCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHH
Q 010547 231 AEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 309 (507)
Q Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~ 309 (507)
+.+.. .+...+...+ ...++.+.+.+ ..+.+..+.|+... ..+.++.++
T Consensus 247 ~~e~~~~~~~~~~~~g------------------------~~~i~~~~~~g----~l~~~~~~~H~~~~--~~~~~~~l~ 296 (468)
T 3lnp_A 247 LHETDFEVSESLETFN------------------------KRPTQRLADIG----FLNERVSCVHMTQV--DDGDIKILQ 296 (468)
T ss_dssp ESCSHHHHHHHHHHHS------------------------SCHHHHHHHTT----CCSTTEEEEECCSC--CHHHHHHHH
T ss_pred eCCCHHHHHHHHHHhC------------------------CCHHHHHHHcC----CCCCCeEEEeccCC--CHHHHHHHH
Confidence 95432 1111111000 01122222221 11556777888763 334566677
Q ss_pred hCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCC
Q 010547 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWG 389 (507)
Q Consensus 310 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 389 (507)
+.|+.+. +||...... + ....++.++++.|+++++|||+.+.+...+
T Consensus 297 ~~g~~v~--~~p~s~~~~-------~------------~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~------------ 343 (468)
T 3lnp_A 297 KTGASII--HCPESNLKL-------A------------SGFCPIAKLSAANIPLAIGTDGAASNNDLD------------ 343 (468)
T ss_dssp HHCCEEE--ECHHHHHHT-------T------------CCCCCHHHHHHTTCCEEECCCCTTSSCCCC------------
T ss_pred hcCCEEE--EChhhhhhc-------C------------CCCCCHHHHHHCCCeEEEECCCCcCCCCCC------------
Confidence 7776554 355321110 0 001134677889999999999876532111
Q ss_pred CCchhhh-HHHHHHHHH---HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCC
Q 010547 390 GISSLQF-VLPVTWSYG---RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKH 464 (507)
Q Consensus 390 ~~~~~~~-~l~~~~~~~---~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~ 464 (507)
.++. .+...+... ...++|++++++++|.|||++||+ +++|+|++||.|||||||.+..+..+.
T Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~-------- 412 (468)
T 3lnp_A 344 ---MFSETKTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPV-------- 412 (468)
T ss_dssp ---HHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSC--------
T ss_pred ---HHHHHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCc--------
Confidence 1111 111111111 145899999999999999999999 568999999999999999886553321
Q ss_pred CCCccccCc---EEeeEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 465 PSISAYLGR---RLSGKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 465 ~~~~~~~~~---~~~~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
.+++..+ ...+.|..||++|++||++|++++.+.++.
T Consensus 413 --~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~ 452 (468)
T 3lnp_A 413 --FDPVSHMVYCTKSTQVSHVWVNGRCLLKNGELTTLNEETL 452 (468)
T ss_dssp --SCHHHHHHHSCCGGGEEEEEETTEEEEETTEESSSCHHHH
T ss_pred --cCHHHHhhccCCCCCceEEEECCEEEEECCeECCCCHHHH
Confidence 2222222 123579999999999999999988765543
No 24
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=2.2e-36 Score=308.87 Aligned_cols=376 Identities=15% Similarity=0.098 Sum_probs=228.3
Q ss_pred CcceEEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC---C
Q 010547 41 PYNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---T 113 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~---~ 113 (507)
++++++|+|++|+|+++ +.+++|+|+||+|++|++..+.+ .+.+.++||++|++|+|||||+|+|+..... .
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~-~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~ 82 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA-GLEADERLELPDHVLMPGLINLHGHSAMSLLRGLA 82 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT-TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc-cCCCCeEEeCCCcEEeeCccchhhChhhHhhccCC
Confidence 46789999999998764 45899999999999999865443 2236789999999999999999999943211 1
Q ss_pred C---------------------CCChh----HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe
Q 010547 114 E---------------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168 (507)
Q Consensus 114 ~---------------------~~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (507)
. .+.+. .....++++||||+.++. ...+...+.......+..+.....
T Consensus 83 ~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-------~~~~~~~~~~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 83 DDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMY-------FYNAAVARAGLASGMRTFVGCSIL 155 (447)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECB-------SCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-------cCHHHHHHHHHHcCCeEEEEchhc
Confidence 0 01111 234567899999999874 122333333333322322222222
Q ss_pred ccccC---CCcccHHHHHHHHHc--CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc-cchhhhh
Q 010547 169 GGLVP---ENAYNASALEALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVK 242 (507)
Q Consensus 169 ~~~~~---~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~ 242 (507)
..... ......+...++.+. |...++..+.+ ...+..+++.+.++++.|+++|.++.+|+.+.. .+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~ 232 (447)
T 4f0r_A 156 EFPTNYASNADDYIAKGMAERSQFLGEDLLTFTLAP---HAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK 232 (447)
T ss_dssp SSCCSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEE---CCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHHHHHhcCCCceEEEEec---CCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 10001 111222333344332 43333333322 222357899999999999999999999996542 1111111
Q ss_pred cccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccc
Q 010547 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~ 322 (507)
..+ ...++.+.+.+ ..+.+..+.|+.. ...+.++.+++.|+.+.. ||.
T Consensus 233 ~~g------------------------~~~i~~~~~~g----~~~~~~~~~H~~~--~~~~~~~~~~~~g~~~~~--~p~ 280 (447)
T 4f0r_A 233 EHG------------------------QRPLARLQRLG----LLSPRLVAAHMVH--LNDAEVELAARHGLSTAH--NPA 280 (447)
T ss_dssp HHS------------------------SCHHHHHHHHT----CCSTTEEEEECCS--CCHHHHHHHHHHTCEEEE--CHH
T ss_pred HcC------------------------CCHHHHHHHcC----CCCCCcEEEeccC--CCHHHHHHHHHcCCEEEE--Cch
Confidence 000 00122222221 1145677888876 334556777777765543 553
Q ss_pred cccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh-HHHHH
Q 010547 323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPVT 401 (507)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 401 (507)
...... ....++.++++.|++++++||+.+.+... ..++. .+...
T Consensus 281 ~~~~~~-------------------~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~---------------~~~~~~~~~~~ 326 (447)
T 4f0r_A 281 SNMKLA-------------------SGISPVSKLMDAGVAVGIGTDGAASNNKL---------------DMLAETRLAAL 326 (447)
T ss_dssp HHHHTT-------------------CCCCCHHHHHHTTCEEEECCCCGGGTCCC---------------CHHHHHHHHHH
T ss_pred hhhhcC-------------------CCCCcHHHHHHCCCcEEEeCCCCcCCCCC---------------CHHHHHHHHHH
Confidence 211000 00113567788999999999987542111 11111 11111
Q ss_pred HHHH---HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCc---E
Q 010547 402 WSYG---RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGR---R 474 (507)
Q Consensus 402 ~~~~---~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 474 (507)
.... ...++|++++++++|.|||++||+ +++|+|++||.||||+||.+..+..+. .+++..+ .
T Consensus 327 ~~~~~~~~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~~~~~~ 396 (447)
T 4f0r_A 327 LAKVGTLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPA----------FDPISHVVYAA 396 (447)
T ss_dssp HHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSC----------SCHHHHHHHTC
T ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCC----------cChHHHheecC
Confidence 2211 145899999999999999999999 568999999999999999886553321 2222221 1
Q ss_pred EeeEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 475 LSGKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 475 ~~~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
..+.|..||++|++||++|++++.+.++.
T Consensus 397 ~~~~v~~v~v~G~~v~~~g~~~~~d~~~~ 425 (447)
T 4f0r_A 397 GREQVSHVWVKGRALMRERKLTTLDESDL 425 (447)
T ss_dssp CGGGEEEEEETTEEEEETTEESSSCHHHH
T ss_pred CCCCceEEEECCEEEEECCeECcCCHHHH
Confidence 22479999999999999999998776554
No 25
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=3.2e-36 Score=305.51 Aligned_cols=357 Identities=16% Similarity=0.099 Sum_probs=220.6
Q ss_pred cceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC----
Q 010547 42 YNQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---- 114 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~---- 114 (507)
+.+++|+|++|+|+++ ..+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+.......
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~ 79 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDL---PNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNA 79 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHH
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCC---CCCeEEeCCCCEECCCeeeeEeeecccCCChhhhh
Confidence 5688999999999975 34789999999999999864333 3789999999999999999999998764310
Q ss_pred -CC------ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec-------c----------
Q 010547 115 -WE------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-------G---------- 170 (507)
Q Consensus 115 -~~------~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---------- 170 (507)
.+ ......+.++++||||+++++ +. . ..+....+.....+ ..+...+ +
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~-----~-~~l~~~~~~~~~~g-~r~~~~g~~~~~~~g~~~~~~~~~~ 151 (423)
T 3feq_A 80 TQPNILAAIRSLPILDAMLSRGFTSVRDAG-GA-----D-WSLMQAVETGLVSG-PRIFPSGKALSQTGGHGDFRPRGDL 151 (423)
T ss_dssp HSCHHHHHHTHHHHHHHHHHTTEEEEEECS-SC-----C-HHHHHHHHTTSSCS-CEEECCCSEEECTTSTTCCCCC---
T ss_pred cCCHHHHHHHHHHHHHHHHhCCeEEEEeCC-Cc-----h-HHHHHHHHcCCCCC-CeEEecCcccccCCCCccccccccc
Confidence 01 112345677999999999986 21 1 23333333322111 1111100 0
Q ss_pred ---------------ccCCCcccHHHHHHHHHcCCcEEEEcccCC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 010547 171 ---------------LVPENAYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (507)
Q Consensus 171 ---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 230 (507)
.....++..+.++++.+.|+..+|.+.... .+.+.+..++++++++++.|+++|.++.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H 231 (423)
T 3feq_A 152 LEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAH 231 (423)
T ss_dssp CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEE
Confidence 011112234566777788999999875311 123344689999999999999999999999
Q ss_pred cCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHh
Q 010547 231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT 310 (507)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~ 310 (507)
+.+. ..+...++. |.. .+.|+.. ...+.++.+++
T Consensus 232 ~~~~--------------------------------~~i~~~l~~-----------g~~-~i~H~~~--~~~~~~~~l~~ 265 (423)
T 3feq_A 232 AYTG--------------------------------RAIARAVRC-----------GVR-TIEHGNL--VDEAAAKLMHE 265 (423)
T ss_dssp EEEH--------------------------------HHHHHHHHH-----------TCC-EEEEEEE--CCHHHHHHHHH
T ss_pred eCCh--------------------------------HHHHHHHHc-----------CCC-EEeccCc--CCHHHHHHHHH
Confidence 9522 123344432 211 3445443 22345666667
Q ss_pred CCCCEEEecccccccccccCCCCCCCceeEcCCCCCh------hhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCc
Q 010547 311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNF 384 (507)
Q Consensus 311 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~ 384 (507)
.|+.+..........+.. ......+|..... .....+.++++.|+++++|||+.......
T Consensus 266 ~gv~~~pt~~~~~~~~~~------~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~~~-------- 331 (423)
T 3feq_A 266 HGAFVVPTLVTYDALAKH------GAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEMHAF-------- 331 (423)
T ss_dssp HTCEEECCTHHHHHHHHH------TGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGGGGG--------
T ss_pred CCCccccchHHHHHHHhc------ccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCcc--------
Confidence 776553221111111100 0001112221111 23456778888999999999976321110
Q ss_pred cccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccC
Q 010547 385 LKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMK 463 (507)
Q Consensus 385 ~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~ 463 (507)
+...+....+. +|++++++++|.|||++||+ +++|+|++||.||||++|.|+..++. ....
T Consensus 332 -------------~~~e~~~~~~~-ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~----~~~~ 393 (423)
T 3feq_A 332 -------------QSGEFRIRAEV-LGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLEDIG----VVAD 393 (423)
T ss_dssp -------------TTHHHHHHHTT-SCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCGG----GTSS
T ss_pred -------------hHHHHHHHHhh-CCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHH----HHhc
Confidence 01112223444 99999999999999999999 66899999999999999987533221 1111
Q ss_pred CCCCccccCcEEeeEEEEEEECCEEEEecCcccCC
Q 010547 464 HPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA 498 (507)
Q Consensus 464 ~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~ 498 (507)
.. .+|..||++|++||++++....
T Consensus 394 ~~-----------~~v~~v~~~G~~v~~~~~~~~~ 417 (423)
T 3feq_A 394 EG-----------ARVEYVLQRGTLVKRQAAGREG 417 (423)
T ss_dssp ST-----------TSEEEEEETTEEEEEC------
T ss_pred cC-----------CCceEEEECCEEEeCCcccccc
Confidence 00 2699999999999999887653
No 26
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.2e-36 Score=304.66 Aligned_cols=377 Identities=14% Similarity=0.105 Sum_probs=226.3
Q ss_pred CCcceEEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC--
Q 010547 40 LPYNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-- 113 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~-- 113 (507)
.++++++|+|++|+++++ +.+++|+|+||||++|++..+.. .+.++++||++|++|+|||||+|+|+......
T Consensus 5 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~ 83 (451)
T 4dyk_A 5 RNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAM-RHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGL 83 (451)
T ss_dssp -CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHT-TTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTS
T ss_pred cchhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccc-cCCCCeEEeCCCCEEeecccchhhChhhHHhccC
Confidence 446789999999999653 35799999999999999865431 12367899999999999999999999432111
Q ss_pred ----------------------CCCChh----HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEE
Q 010547 114 ----------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 167 (507)
Q Consensus 114 ----------------------~~~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (507)
+.+.+. .....++++||||+.++. ...+.+.+.......+.......
T Consensus 84 ~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-------~~~~~~~~a~~~~g~r~~~~~~~ 156 (451)
T 4dyk_A 84 ADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMY-------FYPQAICGVVHDSGVRAQVAIPV 156 (451)
T ss_dssp SCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-------SCHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-------cCHHHHHHHHHHcCCeEEEEchh
Confidence 011111 234456799999999874 12333333333333232222222
Q ss_pred eccccCCC----cccHHHHHHHHH--cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc-cchhh
Q 010547 168 WGGLVPEN----AYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERH 240 (507)
Q Consensus 168 ~~~~~~~~----~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~ 240 (507)
.. ..... ....+...++.+ .+...++..+.+ ...+..+++.+.++++.|+++|.++.+|+.+.. .+...
T Consensus 157 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~ 232 (451)
T 4dyk_A 157 LD-FPIPGARDSAEAIRQGMALFDDLKHHPRIRIAFGP---HAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQA 232 (451)
T ss_dssp CS-SCBTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEE---CCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHH
T ss_pred hC-CCCccccCHHHHHHHHHHHHHHhcCCCceEEEEec---CCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHH
Confidence 11 11111 112223333322 122222222222 233457889999999999999999999985432 11111
Q ss_pred hhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecc
Q 010547 241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETC 320 (507)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~ 320 (507)
+...+ ...++.+.+.+ ..+.+..+.|+... ..+.++.+++.|+.+.. |
T Consensus 233 ~~~~g------------------------~~~i~~~~~~g----~~~~~~~~~H~~~~--~~~~~~~l~~~g~~v~~--~ 280 (451)
T 4dyk_A 233 MERNG------------------------ERPLARLHRLG----LLGPRFQAVHMTQV--DNDDLAMLVETNSSVIH--C 280 (451)
T ss_dssp HHHHS------------------------SCHHHHHHHTT----CCSTTEEEEECCCC--CHHHHHHHHHHTCEEEE--C
T ss_pred HHHhC------------------------CCHHHHHHHCC----CCCCCeEEEECCCC--CHHHHHHHHHcCCEEEE--C
Confidence 10000 01122222221 11456777888763 33456677777765543 5
Q ss_pred cccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH-HH
Q 010547 321 PHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LP 399 (507)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 399 (507)
|...... + ....++.++++.|+++++|||+.+.+...+ .++.. +.
T Consensus 281 p~s~~~~-------~------------~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~---------------~~~~~~~~ 326 (451)
T 4dyk_A 281 PESNLKL-------A------------SGFCPVEKLWQAGVNVAIGTDGAASNNDLD---------------LLGETRTA 326 (451)
T ss_dssp HHHHHHT-------T------------CCCCCHHHHHHHTCCEEECCCCGGGSSCCC---------------HHHHHHHH
T ss_pred hhhhhhc-------c------------CCcccHHHHHhCCCeEEEECCCCccCCCCC---------------HHHHHHHH
Confidence 5321110 0 001124567888999999999875422111 11111 11
Q ss_pred HHHHHH---HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcE-
Q 010547 400 VTWSYG---RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR- 474 (507)
Q Consensus 400 ~~~~~~---~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~- 474 (507)
...... ...++|++++++++|.|||++||+ +++|+|++||.||||++|.+..+..+ . .+|+..+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~---------~-~~~~~~~~~ 396 (451)
T 4dyk_A 327 ALLAKAVYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQP---------V-YDPVSQLIY 396 (451)
T ss_dssp HHHHHHHHTCTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCS---------C-SCHHHHHHH
T ss_pred HHHhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCC---------C-CCHHHHhhc
Confidence 111111 145799999999999999999999 56899999999999999988644221 1 33333332
Q ss_pred --EeeEEEEEEECCEEEEecCcccCCCCCccc
Q 010547 475 --LSGKVLATISRGNLVYKEGNHAPAACGSPI 504 (507)
Q Consensus 475 --~~~~V~~v~v~G~~v~~~g~~~~~~~~~~~ 504 (507)
....|..||++|++||++|+++..+.++.+
T Consensus 397 ~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~ 428 (451)
T 4dyk_A 397 ASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLI 428 (451)
T ss_dssp HCCGGGEEEEEETTEEEEETTEESSSCHHHHH
T ss_pred cCCCCCccEEEECCEEEEECCEECcCCHHHHH
Confidence 124699999999999999999987766543
No 27
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=1.5e-35 Score=303.64 Aligned_cols=373 Identities=14% Similarity=0.105 Sum_probs=221.5
Q ss_pred EEEEec-EEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC----
Q 010547 45 YWLTSK-RIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW---- 115 (507)
Q Consensus 45 ~~i~n~-~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~---- 115 (507)
++|+|+ .|+++++ +.+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+........
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~ 78 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDR---SVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLE 78 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCCT---TCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGS
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCCC---CCCeEEeCCCCEEecCeeecccccchhhhcccccCC
Confidence 789999 7777765 46899999999999999874422 36889999999999999999999964322100
Q ss_pred -CCh-----------------------------hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeE
Q 010547 116 -EGF-----------------------------PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165 (507)
Q Consensus 116 -~~~-----------------------------~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 165 (507)
..+ ......++++||||+.++. ...+.......+....++........+
T Consensus 79 ~~~l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~a~~~~g~r~~ 157 (456)
T 3ls9_A 79 RVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQH-LFFPGATADSYIDATIEAATDLGIRFH 157 (456)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEE-CCCCSSSCCTHHHHHHHHHHHHTCEEE
T ss_pred CCCHHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEecc-ccccCcccchhHHHHHHHHHHcCCEEE
Confidence 000 1123457899999999985 333333212222233333322111111
Q ss_pred EEeccccC--------------CCcccHHHHHHHHH-------cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 010547 166 GFWGGLVP--------------ENAYNASALEALLN-------AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224 (507)
Q Consensus 166 ~~~~~~~~--------------~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 224 (507)
...+.... ......+...++.+ .+...+.. .+ ...+..+++.++++++.|+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~l~~~~~~a~~~g 232 (456)
T 3ls9_A 158 AARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIAL--GP---CGVPYDKPELFEAFAQMAADYD 232 (456)
T ss_dssp EEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEE--CC---CCTTTSCHHHHHHHHHHHHHHT
T ss_pred EEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEE--ec---CCCCCCCHHHHHHHHHHHHHCC
Confidence 11111111 00111233333332 22222222 22 3345678999999999999999
Q ss_pred CcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHH
Q 010547 225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDL 304 (507)
Q Consensus 225 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~ 304 (507)
.++.+|+.+...........+ ....+...+.+ ..+.+..+.|+... ..+.
T Consensus 233 ~~v~~H~~e~~~~~~~~~~~~------------------------~~~~~~~~~~g----~~~~~~~i~H~~~~--~~~~ 282 (456)
T 3ls9_A 233 VRLHTHFYEPLDAGMSDHLYG------------------------MTPWRFLEKHG----WASDRVWLAHAVVP--PREE 282 (456)
T ss_dssp CEEEEEECCTTHHHHHHHHHS------------------------SCHHHHHHHTT----CSSTTEEEEECCSC--CGGG
T ss_pred CCEEEEeCCCchHHHHHHHhC------------------------CCHHHHHHHcC----CCCCCcEEEeccCC--CHHH
Confidence 999999955432110000000 00122222221 11445667777652 2234
Q ss_pred HHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCc
Q 010547 305 LMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNF 384 (507)
Q Consensus 305 i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~ 384 (507)
++.+++.|+.+. +||....... ....++.++++.|+++++|||+.+++...++
T Consensus 283 ~~~l~~~g~~~~--~~p~s~~~l~-------------------~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~------ 335 (456)
T 3ls9_A 283 IPEFADAGVAIA--HLIAPDLRMG-------------------WGLAPIREYLDAGITVGFGTTGSASNDGGNL------ 335 (456)
T ss_dssp HHHHHHHTCEEE--ECHHHHHHTT-------------------CCCCCHHHHHHTTCEEEECCCCTTSSCCCCH------
T ss_pred HHHHHHcCCEEE--EChhHHhhcC-------------------CCcchHHHHHHCCCcEEEECCCCccCCCCCH------
Confidence 666666676554 4664211110 0011345778899999999998764322111
Q ss_pred cccCCCCchhhhHHHHHHHHHH---hc----CCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCC
Q 010547 385 LKAWGGISSLQFVLPVTWSYGR---KY----GVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDND 457 (507)
Q Consensus 385 ~~~~~~~~~~~~~l~~~~~~~~---~~----gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~ 457 (507)
++. +........ .. +++++++++++|.|||++||++++|+|++||.|||||+|.++.+..+
T Consensus 336 ---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d~~~~~~~~-- 403 (456)
T 3ls9_A 336 ---------LGD-LRLAALAHRPADPNEPEKWLSARELLRMATRGSAECLGRPDLGVLEEGRAADIACWRLDGVDRVG-- 403 (456)
T ss_dssp ---------HHH-HHHHHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCTTSSCCSTTSBCCEEEEESCSGGGTT--
T ss_pred ---------HHH-HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEEeCCCCccCC--
Confidence 111 111111111 11 79999999999999999999944999999999999999988644321
Q ss_pred CCcccCCCCCccccCcEEe---eEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 458 HPVHMKHPSISAYLGRRLS---GKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
. .+|+..+... ..|..|||+|++||++|+++..+..+.
T Consensus 404 -------~-~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~ 444 (456)
T 3ls9_A 404 -------V-HDPAIGLIMTGLSDRASLVVVNGQVLVENERPVLADLERI 444 (456)
T ss_dssp -------B-SSHHHHHHHCCSBCCCSEEEETTEEEEETTEESSSCHHHH
T ss_pred -------C-CChHHHhhccCCCCCeeEEEECCEEEEECCEeCCCCHHHH
Confidence 1 3343333221 369999999999999999998765543
No 28
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.2e-35 Score=294.42 Aligned_cols=356 Identities=17% Similarity=0.125 Sum_probs=220.2
Q ss_pred CCcceEEEEecEEECCCC---ceeeeEEEe-CCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKG---VISGAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW 115 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~---~~~~~I~I~-dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~ 115 (507)
.++++++|+|++|+++++ ..+++|+|+ ||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+....+
T Consensus 12 ~~~~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~ 88 (417)
T 2ogj_A 12 PLQAPILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAP---ADTQRIDAKGAFISPGWVDLHVHIWHGGTDIS 88 (417)
T ss_dssp --CCCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCS---SCEEECCC--CEEEECEEEEEECCCBTTBSSC
T ss_pred cCCCcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCC---CCCeEEECCCCEEccCeeeccccccccccccC
Confidence 344679999999999876 358999999 99999999764322 14579999999999999999999987654433
Q ss_pred CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH-HHHHHhcCceeeEEEec---cccC-----CCc----ccHHHH
Q 010547 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL-KVDAAEKRIYVDVGFWG---GLVP-----ENA----YNASAL 182 (507)
Q Consensus 116 ~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~-----~~~----~~~~~~ 182 (507)
+. ..+.++++||||+++++ +..+ ...+.+.. ..+... ..+...... +... ... ...+.+
T Consensus 89 ~~---~~~~~l~~GvTtv~d~~-~~~~--~~~~~~~~~~~~~~~--~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~ 160 (417)
T 2ogj_A 89 IR---PSECGAERGVTTLVDAG-SAGE--ANFHGFREYIIEPSR--ERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRI 160 (417)
T ss_dssp CC---GGGTSGGGTEEEEEEES-SCCS--TTHHHHHHHTTTTCS--SEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHH
T ss_pred CC---HHHHHHhCCcCeEEeCC-cCCC--cCHHHHHHHHhhccc--cCeEEEeccccCcCCCCCCcccccchhhcCHHHH
Confidence 22 23457899999999875 3222 23333222 111111 111111111 1211 000 123455
Q ss_pred HHHHHc---CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCC
Q 010547 183 EALLNA---GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKT 259 (507)
Q Consensus 183 ~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (507)
+++.+. +..+++.++... .....+.+.+.++++.|++++.++.+|++....
T Consensus 161 ~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~----------------------- 214 (417)
T 2ogj_A 161 LECYAENSEHIVGLKVRASHV---ITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPA----------------------- 214 (417)
T ss_dssp HHHHHTCTTTEEEEEEEESHH---HHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSS-----------------------
T ss_pred HHHHHhCCCceEEEEEEecCC---ccccccHHHHHHHHHHHHHcCCcEEEEcCCCcc-----------------------
Confidence 555553 345677665421 112457788899999999999999999954221
Q ss_pred CChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh---------hHHHHHHHHHHhCCCCEEEecccccccccccC
Q 010547 260 RPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA---------SSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 330 (507)
Q Consensus 260 ~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~---------~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~ 330 (507)
.++.....+.. + ..+.|+... ....+.+..+++.|+.+ ..++...
T Consensus 215 --------~~~~~~~~l~~--------g--~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v--~~~~~~~------ 268 (417)
T 2ogj_A 215 --------LYDEVLEILGP--------G--DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRL--DIGHGGA------ 268 (417)
T ss_dssp --------CHHHHHHHCCT--------T--CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEE--ECCBCSS------
T ss_pred --------cHHHHHHHhcC--------C--CEEEeccCCCccchhccCHHHHHHHHHHHhcCcEE--EecCCCc------
Confidence 01122222211 2 345565431 13445666666666543 2233110
Q ss_pred CCCCCCceeEcCCCCChhhHHHHHHHHhcC-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcC
Q 010547 331 IPDGDTRFKCAPPIRDAANKEKLWEALMDG-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG 409 (507)
Q Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g 409 (507)
......+.+++++| ++++++||+. .+.. .++. ..+...+....+.+
T Consensus 269 ----------------~~~~~~~~~~~~~G~~~~~lgtD~~-~~~~-----~g~~-----------~~l~~~~~~~~~~~ 315 (417)
T 2ogj_A 269 ----------------SFSFKVAEAAIARGLLPFSISTDLH-GHSM-----NFPV-----------WDLATTMSKLLSVD 315 (417)
T ss_dssp ----------------SCCHHHHHHHHHTTCCCSBCCBCBS-TTTT-----TTTC-----------CCHHHHHHHHHHTT
T ss_pred ----------------cccchHHHHHHHcCCCceEEEcCCC-CCcc-----CCCh-----------hHHHHHHHHHHHcC
Confidence 01245678888999 9999999976 4311 0110 01444444445578
Q ss_pred CCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee----EEEEEEEC
Q 010547 410 VTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG----KVLATISR 485 (507)
Q Consensus 410 ls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~V~~v~v~ 485 (507)
++++++++++|.|||++||++++|+|++||.||||++|.+..+.. ..++.+..+.+ .|..||++
T Consensus 316 l~~~~al~~~T~n~A~~lgl~~~G~l~~G~~ADlvv~d~~~~~~~------------~~~~~g~~~~~~~~~~v~~t~v~ 383 (417)
T 2ogj_A 316 MPFENVVEAVTRNPASVIRLDMENRLDVGQRADFTVFDLVDADLE------------ATDSNGDVSRLKRLFEPRYAVIG 383 (417)
T ss_dssp CCHHHHHHTTTHHHHHHTTCCCSSTTSTTSBCEEEEEEEEEEEEE------------EECTTSCEEEEEEEEEEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCccCCCCcccEEEEecccCCce------------ecCCCCceEecccccceEEEEEC
Confidence 999999999999999999995499999999999999997654321 33445555555 79999999
Q ss_pred CEEEEecCcccCCCCCcccc
Q 010547 486 GNLVYKEGNHAPAACGSPIL 505 (507)
Q Consensus 486 G~~v~~~g~~~~~~~~~~~~ 505 (507)
|++||++|+++..+ ++++
T Consensus 384 G~~v~~~~~~~~~~--~~~~ 401 (417)
T 2ogj_A 384 AEAIAASRYIPRAR--KLVR 401 (417)
T ss_dssp TEEEECCCCCCCC-------
T ss_pred CEEEEeCCccchHH--HHHH
Confidence 99999999998755 5554
No 29
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.5e-35 Score=300.92 Aligned_cols=375 Identities=13% Similarity=0.069 Sum_probs=224.0
Q ss_pred CcceEEEEecEEECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC--
Q 010547 41 PYNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-- 114 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~-- 114 (507)
++.+++|+|++|+++++ +.+++|+|+||||++|++..+.+..+.+.++||++|++|+|||||+|+|+.......
T Consensus 12 ~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~ 91 (472)
T 4dzh_A 12 EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVA 91 (472)
T ss_dssp EEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred CcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhcccc
Confidence 35789999999998763 458999999999999998654321112568999999999999999999996532110
Q ss_pred -------C---------------CCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe
Q 010547 115 -------W---------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168 (507)
Q Consensus 115 -------~---------------~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (507)
| +.+ ......++++||||+.++. ...+...+.......+..+.....
T Consensus 92 ~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-------~~~~~~~~a~~~~g~r~~~~~~~~ 164 (472)
T 4dzh_A 92 DDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENY-------FFADVQAAVYKQHGFRALVGAVII 164 (472)
T ss_dssp CSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-------SCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-------cCHHHHHHHHHHhCCeEEEEeccc
Confidence 0 001 1133458999999999874 122333333222222222222221
Q ss_pred ccccCC-C---cccHHHHHHHHHc--CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhh
Q 010547 169 GGLVPE-N---AYNASALEALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHV 241 (507)
Q Consensus 169 ~~~~~~-~---~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~ 241 (507)
. +... . .+..+...++.+. +...++..+.+ ...+..+++.++++++.|+++|.++.+|+.+... +...+
T Consensus 165 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~ 240 (472)
T 4dzh_A 165 D-FPTAWASSDDEYFARAGELHDQWRDDPLISTAFAP---HAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSV 240 (472)
T ss_dssp S-SCCSSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEE---CCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHH
T ss_pred C-CCcccccCHHHHHHHHHHHHHHhCCCCceEEEEec---CCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH
Confidence 1 1111 1 1122223333221 22122222222 3334578999999999999999999999854321 11111
Q ss_pred hcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccc
Q 010547 242 KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP 321 (507)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~ 321 (507)
...+ .+.++.+.+.+ ..+.+..+.|+... ..+.++.+++.|+.+.. ||
T Consensus 241 ~~~g------------------------~~~i~~~~~~g----~~~~~~~~~H~~~l--~~~~i~~l~~~g~~v~~--~p 288 (472)
T 4dzh_A 241 AQYG------------------------QRPLARLDRLG----LVNDRLIAVHMTQL--TEAEIHLCAERGVSVVH--CP 288 (472)
T ss_dssp HHHS------------------------SCHHHHHHHHT----CCSTTEEEEECCSC--CHHHHHHHHHHTCEEEE--CH
T ss_pred HHhC------------------------CCHHHHHHHcC----CCCCCeEEEeccCC--CHHHHHHHHHcCCEEEE--Ch
Confidence 0000 00122222221 11456778888763 33456677777766543 55
Q ss_pred ccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh-HHHH
Q 010547 322 HYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPV 400 (507)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 400 (507)
...... + ....++.++++.|+++++|||+.+.+...+ .++. .+..
T Consensus 289 ~s~~~~-------~------------~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~---------------~~~~~~~a~ 334 (472)
T 4dzh_A 289 ESNLKL-------A------------SGFCPACALQRASVNLAIGTDGCASNNDLD---------------MFSENRTAA 334 (472)
T ss_dssp HHHHHT-------T------------CCCCCHHHHHHTTCEEEECCCCTTSSCCCC---------------HHHHHHHHH
T ss_pred HHHHhc-------C------------CCCccHHHHHHCCCCEEEECCCCcCCCCCC---------------HHHHHHHHH
Confidence 321110 0 001135677889999999999875422211 1111 1111
Q ss_pred HHHHH---HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcE--
Q 010547 401 TWSYG---RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR-- 474 (507)
Q Consensus 401 ~~~~~---~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 474 (507)
.+... ...++|++++++++|.|||++||+ +++|+|++||.|||||+|.+..+..+ . ++|+..+.
T Consensus 335 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~---------~-~~~~~~l~~~ 404 (472)
T 4dzh_A 335 ILAKAVANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQP---------L-HHVLSQLIYA 404 (472)
T ss_dssp HHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCS---------C-SCHHHHHHHT
T ss_pred HHhhhhcCCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCC---------c-cCHHHHHhhc
Confidence 11111 124799999999999999999999 66899999999999999988644221 1 33333332
Q ss_pred -EeeEEEEEEECCEEEEecCcccCCCCCc
Q 010547 475 -LSGKVLATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 475 -~~~~V~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
....|..||++|++||++|++++.+..+
T Consensus 405 ~~~~~V~~v~v~G~~v~~~g~~~~~d~~~ 433 (472)
T 4dzh_A 405 AGRHQVTDVWIAGKPKLVQRELIDMDTAA 433 (472)
T ss_dssp CCGGGEEEEEETTEEEEETTEETTCCHHH
T ss_pred CCCCCceEEEECCEEEEECCEECcCCHHH
Confidence 2246999999999999999998766544
No 30
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=5.7e-35 Score=291.83 Aligned_cols=353 Identities=18% Similarity=0.196 Sum_probs=220.6
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCC-CEEecceeecccccCCCCCCCCCChhH
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPS 120 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g-~~v~PGfID~H~H~~~~~~~~~~~~~~ 120 (507)
+++++|+|++|++++ +++|+|+||||++|++.... .+.++||++| ++|+|||||+|+|+..+....++ .
T Consensus 4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~~----~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~~~~~---~ 73 (379)
T 2ics_A 4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATISG----SAKETIHLEPGTYVSAGWIDDHVHCFEKMALYYD---Y 73 (379)
T ss_dssp CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCCC----CEEEEEECCTTCEEEECEEEEEECCCTTSSSSCC---C
T ss_pred cccEEEECCEEEcCC---cceEEEECCEEEEecCCCCC----CCCcEEeCCCCEEEccCEEEeccccCccCccccC---c
Confidence 357899999999965 78999999999999976421 2467999999 99999999999999876543333 3
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe--ccccCC--C----cccHHHHHHHHH---cC
Q 010547 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW--GGLVPE--N----AYNASALEALLN---AG 189 (507)
Q Consensus 121 ~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~----~~~~~~~~~~~~---~g 189 (507)
..+.++++||||+++++ ... ....+.+.+..+....+.. .+... .+..+. . ....+.++++.+ .+
T Consensus 74 ~~~~~~~~GvTtv~d~~-~~~--~~~~~~~~~~~~~~~~~i~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (379)
T 2ics_A 74 PDEIGVKKGVTTVIDAG-TTG--AENIHEFYDLAQQAKTNVF-GLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDF 149 (379)
T ss_dssp HHHHTGGGTEEEEEEES-SSC--TTTHHHHHHHHHTSSSEEE-EEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTT
T ss_pred hhhhHhhCceeEEEcCC-CCC--ccCHHHHHHHHHhhcccEE-EEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCc
Confidence 45678999999999875 221 2334444444433221111 11111 122221 1 112355555554 46
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHH
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 268 (507)
+.+++.+.... ..+..+.+.+.++++.|++ ++.++.+|+......
T Consensus 150 ~~~i~~~~~~~---~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~------------------------------- 195 (379)
T 2ics_A 150 VVGIKARMSRT---VIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPH------------------------------- 195 (379)
T ss_dssp EEEEEEEESHH---HHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSC-------------------------------
T ss_pred ceEEEEecccc---ccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcch-------------------------------
Confidence 77777765321 1124677889999999999 999999999642210
Q ss_pred HHHHHHHHHhh-ccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 269 IRELLTVAKDT-RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 269 ~~~~~~l~~~~-~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
........+.- ...-...+.+.|+.|.++. ...+.++.+++.|+. +.++|....
T Consensus 196 ~~~~~~~~~~g~~~~H~~~~~~~~~~~~s~~-~~~~~~~~~~~~g~~--~~~~p~~~~---------------------- 250 (379)
T 2ics_A 196 LDEILALMEKGDVLTHCFNGKENGILDQATD-KIKDFAWQAYNKGVV--FDIGHGTDS---------------------- 250 (379)
T ss_dssp HHHHHHHCCTTCEEESTTCCSTTSSEETTTT-EECHHHHHHHHTTCE--EECCCTTTS----------------------
T ss_pred HHHHHHHhhcCCeeeeccCCCccchhhccCH-HHHHHHHHHHHcCCE--EEecCCCCC----------------------
Confidence 01122221110 0000000112223333222 334677777777764 344543110
Q ss_pred hhHHHHHHHHhcC-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHH
Q 010547 348 ANKEKLWEALMDG-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKL 426 (507)
Q Consensus 348 ~~~~~~~~~l~~G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~ 426 (507)
.....+.+++++| ..++++||+.+.+. . .++ ...+...+....+.++|++++++++|.|||++
T Consensus 251 ~~~~~~~~~~~~G~~~~~l~TD~~~~~~---~--~~~-----------~~~~~~~l~~~~~~~ls~~~~~~~~T~n~A~~ 314 (379)
T 2ics_A 251 FNFHVAETALREGMKAASISTDIYIRNR---E--NGP-----------VYDLATTMEKLRVVGYDWPEIIEKVTKAPAEN 314 (379)
T ss_dssp CCHHHHHHHHHTTCCCSBCCCCBCHHHH---H--SSS-----------CCCHHHHHHHHHHHTCCHHHHHHTTTHHHHHH
T ss_pred cCHHHHHHHHHcCCCcceEeccCcccCC---C--CCc-----------HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 1234567888889 88999999752210 0 011 01133334444456899999999999999999
Q ss_pred hCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEee----EEEEEEECCEEEEecCcc
Q 010547 427 AGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG----KVLATISRGNLVYKEGNH 495 (507)
Q Consensus 427 lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~V~~v~v~G~~v~~~g~~ 495 (507)
||++++|+|++||+|||+++|++..+.. +.++.+..+.+ .|..||++|++||++|.+
T Consensus 315 lgl~~~G~l~~G~~ADlvv~d~~~~~~~------------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~ 375 (379)
T 2ics_A 315 FHLTQKGTLEIGKDADLTIFTIQAEEKT------------LTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGHH 375 (379)
T ss_dssp TTCTTSSSCCTTSBCCEEEEEEEEEEEE------------EECTTSCEEEEEEEEEEEEEEETTEEEEC----
T ss_pred hCCCCCcCCCCCCccCEEEEecccccce------------eecCCCCEEEeeeeeeeEEEEECCEEEecCCcc
Confidence 9995599999999999999997654321 55667778888 899999999999999864
No 31
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=8e-35 Score=299.46 Aligned_cols=387 Identities=13% Similarity=0.090 Sum_probs=216.4
Q ss_pred CCCCcceEEEEecEEE-CCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 38 SLLPYNQYWLTSKRIV-TPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 38 ~~~~~~~~~i~n~~i~-~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
+...+.+++|+|++|+ |+|+ +.+++|+|+||||++||+..+.+. .++++||++|++|+|||||+|+|+.....
T Consensus 24 ~~~~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~--~~~~vIDa~G~~v~PG~ID~H~H~~~~~~ 101 (479)
T 3hpa_A 24 SSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPE--TADEVLDLRGHLVIPGLVNTHHHMYQSLT 101 (479)
T ss_dssp -----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCS--CCSEEEECTTEEEEECEEECCCCGGGGGS
T ss_pred CCCCCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCC--CCCeEEECCCCEEeeCceeHhhCcchhcc
Confidence 3445678999999966 5443 458999999999999998776543 35789999999999999999999853211
Q ss_pred CC-----CCC-----------------------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceee
Q 010547 113 TE-----WEG-----------------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (507)
Q Consensus 113 ~~-----~~~-----------------------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (507)
.. ... .......+++.|+|++.+.. ..........................
T Consensus 102 ~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 180 (479)
T 3hpa_A 102 RAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHL-YIYPNGSRLDDSIGAAQRIGMRFHAS 180 (479)
T ss_dssp CSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCB-CCCCTTCCHHHHHHHHHHHTCEEEEE
T ss_pred cccccCCCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceeccee-eeccchhhHHHHHHHHHHhcchhhhh
Confidence 10 000 11234567899999999875 33333333443333333222221111
Q ss_pred EEEeccccC-----------CCcccHHHHHHHHH----cCCcEEEE-cccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEE
Q 010547 165 VGFWGGLVP-----------ENAYNASALEALLN----AGVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228 (507)
Q Consensus 165 ~~~~~~~~~-----------~~~~~~~~~~~~~~----~g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 228 (507)
......... ..........++.. .+...... ...+ ......+.+.+.++...+++.+..+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~g~~~~ 257 (479)
T 3hpa_A 181 RGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAP---CSPFSVSRDLMRDAAVLAREYGVSLH 257 (479)
T ss_dssp EEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEE---SCTTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred hheeeccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecc---cccccCCHHHHHHHHHHHHhcCCeEE
Confidence 111000000 00001111111111 11111111 1111 22345788999999999999999999
Q ss_pred EecCCccc-chhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHH
Q 010547 229 VHAEMEKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME 307 (507)
Q Consensus 229 ~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~ 307 (507)
+|...... +..... . .....+....+.. ..+....+.|+... . ......
T Consensus 258 ~h~~~~~~~~~~~~~----------------~----~g~~~~~~~~~~~--------~~~~~~~~~h~~~~-~-~~~~~~ 307 (479)
T 3hpa_A 258 THLAENVNDIAYSRE----------------K----FGMTPAEYAEDLG--------WVGHDVWHAHCVQL-D-DAGIGL 307 (479)
T ss_dssp EEESCSHHHHHC---------------------------CHHHHHHHTT--------CCSTTEEEEECTTC-C-HHHHHH
T ss_pred eecccchHHHHHHHH----------------H----cCCchHHHHhhhc--------cccccceeeeeEec-c-hhHHHH
Confidence 99743221 000000 0 0000111111111 12455677777653 1 122233
Q ss_pred HHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCcccc
Q 010547 308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKA 387 (507)
Q Consensus 308 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~ 387 (507)
..+.+.... .+|........ + .......+..|+.+++|+|..+.+....
T Consensus 308 ~~~~~~~~~--~~p~~~~~~~~-----~--------------~~~~~~~~~~~~~v~~gtD~~~~~~~~~---------- 356 (479)
T 3hpa_A 308 FARTGTGVA--HCPCSNMRLAS-----G--------------IAPVKKMRLAGVPVGLGVDGSASNDGAQ---------- 356 (479)
T ss_dssp HHHHTCEEE--ECHHHHHHTTC-----C--------------CCCHHHHHHHTCCEEECCCCTTSSCCCC----------
T ss_pred HHhcCCcee--ecccccccccc-----C--------------ccchhHHHhcCCcEEeeccccccCCCcc----------
Confidence 333343332 23321111000 0 0112345667999999999876543211
Q ss_pred CCCCchhhhHHHHHHHH--HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCC
Q 010547 388 WGGISSLQFVLPVTWSY--GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHP 465 (507)
Q Consensus 388 ~~~~~~~~~~l~~~~~~--~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~ 465 (507)
...+......... ....++|++++++++|.|||++||++++|+|++||+|||||||++.++...+.
T Consensus 357 ----~~~~~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~G~I~~G~~ADlvv~D~~~~~~~~~~-------- 424 (479)
T 3hpa_A 357 ----MVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAGAL-------- 424 (479)
T ss_dssp ----HHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCSSSSSCSTTSBCCEEEEETTSGGGTTCT--------
T ss_pred ----HHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHHhCCCCCccCCCCCcCCEEEEcCCCccccCCc--------
Confidence 1111111111111 23457999999999999999999997799999999999999999875543222
Q ss_pred CCccccCcEE--eeEEEEEEECCEEEEecCcccCCCCCccc
Q 010547 466 SISAYLGRRL--SGKVLATISRGNLVYKEGNHAPAACGSPI 504 (507)
Q Consensus 466 ~~~~~~~~~~--~~~V~~v~v~G~~v~~~g~~~~~~~~~~~ 504 (507)
.+|+.++.+ .++|..|||+||+||+||++++.+.++.+
T Consensus 425 -~dp~~~lv~~~~~~v~~tiV~G~~V~~dG~~~~~D~~~~~ 464 (479)
T 3hpa_A 425 -HDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVI 464 (479)
T ss_dssp -TSHHHHHHHSSCCCCSEEEETTEEEEETTEECSSCHHHHH
T ss_pred -cCHHHHhhccCCCCceEEEECCEEEEECCcCCCCCHHHHH
Confidence 445443322 35799999999999999999988776654
No 32
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.2e-34 Score=299.79 Aligned_cols=377 Identities=17% Similarity=0.185 Sum_probs=218.5
Q ss_pred CcceEEEEecE-EECCC--------CceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC
Q 010547 41 PYNQYWLTSKR-IVTPK--------GVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111 (507)
Q Consensus 41 ~~~~~~i~n~~-i~~~~--------~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~ 111 (507)
+.++++|+|++ |+|++ .+.+++|+|+||||++|++..+ + .+.++||++|++|+|||||+|+|+..+.
T Consensus 8 ~~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~---~~~~viD~~G~~v~PG~ID~H~H~~~~~ 83 (492)
T 2paj_A 8 TQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-R---PGETIVDATDCVIYPAWVNTHHHLFQSL 83 (492)
T ss_dssp --CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-C---TTCEEEECBTCEEEECEECCCCCGGGGG
T ss_pred CCCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-C---CCCeEEECCCcEEeeCccccccChhhHh
Confidence 34678999999 99986 3457899999999999998653 1 2578999999999999999999986541
Q ss_pred CC-----------CC--------------CChhHH----HHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCce
Q 010547 112 RT-----------EW--------------EGFPSG----TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY 162 (507)
Q Consensus 112 ~~-----------~~--------------~~~~~~----~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 162 (507)
.. .| +.+... ...++++||||+.+++ .+.+.....+.+....+......
T Consensus 84 ~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~g- 161 (492)
T 2paj_A 84 LKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHN-YVYYPGMPFDSSAILFEEAEKLG- 161 (492)
T ss_dssp CCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECC-CCCCTTCSSCHHHHHHHHHHHTT-
T ss_pred hcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-hhcccccccchHHHHHHHHHHcC-
Confidence 11 11 222222 3348999999999986 33332212223333333332221
Q ss_pred eeEEEeccccCCC----------------cccHHHHHHHHHc--CC---cEEEEcccCCCCCCC-CCCCHHHHHHHHHHH
Q 010547 163 VDVGFWGGLVPEN----------------AYNASALEALLNA--GV---LGLKSFMCPSGINDF-PMTNASHIKEGLSVL 220 (507)
Q Consensus 163 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~--g~---~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~a 220 (507)
+.+....+....+ ....+.+.++.+. +. ..++.++.+ .+. +..+++.+.++++.|
T Consensus 162 ~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~a 238 (492)
T 2paj_A 162 LRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAP---TTVLYSISPREMRETAAVA 238 (492)
T ss_dssp CEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECC---TTTTTSSCHHHHHHHHHHH
T ss_pred CEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEec---ccCCCCCCHHHHHHHHHHH
Confidence 2222211111100 0123334444432 11 113333332 333 467899999999999
Q ss_pred HhcCCcEEEecCCccc-chhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh
Q 010547 221 ARYKRPLLVHAEMEKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS 299 (507)
Q Consensus 221 ~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~ 299 (507)
++.|.++.+|+.+... ++...... +.. .++...+.+ ..+.+..+.|+.+.
T Consensus 239 ~~~g~~v~~H~~~~~~~~~~~~~~~--------------g~~----------~~~~~~~~g----~~~~~~~i~H~~~~- 289 (492)
T 2paj_A 239 RRLGLRMHSHLSETVGYQDSAYSMY--------------GKS----------PVAFCGEHD----WLGSDVWYAHLVKV- 289 (492)
T ss_dssp HHTTCEEEEECC---------------------------CCC----------HHHHHHHTT----CCSTTEEEESCCSC-
T ss_pred HHcCCcEEEEeCCChHHHHHHHHHc--------------CCC----------HHHHHHHCC----CCCCCcEEEEEecC-
Confidence 9999999999965321 11110000 000 111111211 01334566777653
Q ss_pred HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhcc
Q 010547 300 SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLL 379 (507)
Q Consensus 300 ~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~ 379 (507)
..+.++.+++.|+. +.+||..... + + ...|+++ +++++|+++++|||+.+.+...++
T Consensus 290 -~~~~i~~l~~~gv~--v~~~p~~~~~----l---~---~~~~p~~---------~~~~~Gv~v~lgTD~~~~~~~~~~- 346 (492)
T 2paj_A 290 -DADEIALLAQTGTG--VAHCPQSNGR----L---G---SGICPVR---------EMADAGVPVSIGVDGAASNEAADM- 346 (492)
T ss_dssp -CHHHHHHHHHHTCE--EEECHHHHHC----C-----------CCT---------THHHHTCCEEECCCHHHHCSCCSH-
T ss_pred -CHHHHHHHHHcCCE--EEECchhhcc----c---C---CCCCCHH---------HHHHCCCcEEEeCCCCCCCCCCCH-
Confidence 22346667677754 4456632100 0 0 1123443 357789999999997542111100
Q ss_pred ccCCccccCCCCchhhhHHHHH--HHHH-----------------HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCC
Q 010547 380 DEGNFLKAWGGISSLQFVLPVT--WSYG-----------------RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNH 440 (507)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~l~~~--~~~~-----------------~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ 440 (507)
+.. +... .... ...++|++++++++|.|||++||++++|+|++||.
T Consensus 347 --------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~~~Gsl~~Gk~ 411 (492)
T 2paj_A 347 --------------ISE-VHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLDEVGKVAVGYA 411 (492)
T ss_dssp --------------HHH-HHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCTTSSCCSTTSB
T ss_pred --------------HHH-HHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCCCccccCCCCc
Confidence 000 1110 1110 23469999999999999999999976899999999
Q ss_pred CcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe---eEEEEEEECCEEEEecCcccCCCCCcc
Q 010547 441 ADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVLATISRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 441 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G~~v~~~g~~~~~~~~~~ 503 (507)
|||||+|.+..+.. + . ++|+..+... ..|..||++|++||++|+++..+.++.
T Consensus 412 ADlvvld~~~~~~~----~-----~-~~p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~ 467 (492)
T 2paj_A 412 ADIAVYRLDDPRYF----G-----L-HDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEGVDIKEL 467 (492)
T ss_dssp CCEEEEECCSGGGT----T-----C-SSGGGHHHHSCSCCEEEEEEETTEEEEETTBCTTCCHHHH
T ss_pred cCEEEEeCCCcccC----C-----c-cCHHHHHHhcCCCCCceEEEECCEEEEECCeeccCCHHHH
Confidence 99999998864321 1 1 4555544321 369999999999999999987765543
No 33
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=1.2e-34 Score=292.50 Aligned_cols=352 Identities=15% Similarity=0.135 Sum_probs=216.4
Q ss_pred CcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCCh
Q 010547 41 PYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF 118 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 118 (507)
++.+++|+|++|+++++ +..++|+|+||||++|++. . + .+.++||++|++|+|||||+|+|+.......|+.+
T Consensus 4 ~~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~-~-~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~ 78 (408)
T 3be7_A 4 TSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI-N-T---KDATVISIPDLILIPGLMDSHVHIVGNDSKGEESI 78 (408)
T ss_dssp -CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC-C-C---SSSEEEEEEEEEEEECEEEEEECCSSCCCCSGGGT
T ss_pred ccceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC-C-C---CCCeEEECCCCEECcCceeeeEcccCCCCcchhhh
Confidence 35678999999999876 4459999999999999986 2 2 25789999999999999999999982221222111
Q ss_pred -----------hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec-------cccC--C----
Q 010547 119 -----------PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-------GLVP--E---- 174 (507)
Q Consensus 119 -----------~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~---- 174 (507)
....+.++++||||+++++ ++.+ ....+....+...... .++...+ +... .
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~g~~~~~~~~~~~ 153 (408)
T 3be7_A 79 ADSSHMGTVWGVVNAEKTLMAGFTTVRNVG-AANY---ADVSVRDAIERGVING-PTMLVSGPALGITGGHCDHNLLPPE 153 (408)
T ss_dssp TCCTHHHHHHHHHHHHHHHTTTEEEEEECC-CSTT---HHHHHHHHHHTTSSCC-CEEEECCSCBBCTTSTTSCCCSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCEEEeCC-Cccc---cCHHHHHHHHCCCCCC-CEEEEccceeeccCCCCcccccccc
Confidence 1156788999999999986 3222 1112222222111000 1221111 0000 0
Q ss_pred -------CcccHHH----HHHHHHcCCcEEEEcccCC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccch
Q 010547 175 -------NAYNASA----LEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE 238 (507)
Q Consensus 175 -------~~~~~~~----~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 238 (507)
.....++ +++..+.|...++.+.... ...+.+..+++++.++++.|+++|.++.+|+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~--- 230 (408)
T 3be7_A 154 FNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLI--- 230 (408)
T ss_dssp TCCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHH---
T ss_pred ccccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHH---
Confidence 0112233 3444557888888874221 11234567899999999999999999999995421
Q ss_pred hhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEe
Q 010547 239 RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 318 (507)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~ 318 (507)
.+...++. |. ..+.|+.. ...+.++.+++.|+.+.
T Consensus 231 -----------------------------~i~~~~~~-----------g~-~~i~H~~~--~~~~~i~~~~~~g~~v~-- 265 (408)
T 3be7_A 231 -----------------------------GIKAAIKA-----------GV-DSVEHASF--IDDETIDMAIKNNTVLS-- 265 (408)
T ss_dssp -----------------------------HHHHHHHH-----------TC-SEEEECTT--CCHHHHHHHHHTTCEEE--
T ss_pred -----------------------------HHHHHHHc-----------CC-CEEEECCC--CCHHHHHHHHHCCCEEe--
Confidence 12233222 22 24778776 34567777778887553
Q ss_pred cccccccccccCCCCCCCceeEcCCCCCh------hhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCc
Q 010547 319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGIS 392 (507)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~ 392 (507)
+..... +.+..........|+.+.. .....+.+++++|+++++|||+.+... . .
T Consensus 266 --~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p~-~------~--------- 325 (408)
T 3be7_A 266 --MDIFVS--DYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDH-G------D--------- 325 (408)
T ss_dssp --CCCSTH--HHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBCT-T------C---------
T ss_pred --eeecHH--HHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC-c------h---------
Confidence 221110 0000000000111111111 123566778889999999999753211 0 0
Q ss_pred hhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccC
Q 010547 393 SLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLG 472 (507)
Q Consensus 393 ~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (507)
+...+....+.++|++++++++|.|||++||++++|+|++||.||||++|.++..++.
T Consensus 326 -----~~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~i~~G~~ADlvvld~~p~~~~~----------------- 383 (408)
T 3be7_A 326 -----NAKQFAYMVEWGMTPLEAIQASTIKTATLFGIENIGQIKEGFDADIVGVIENPLANIR----------------- 383 (408)
T ss_dssp -----GGGHHHHHHHTTCCHHHHHHTTTHHHHHHHTCSSCSSCCTTSBCCEEEESSCTTTCGG-----------------
T ss_pred -----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCcccccCCCCccCEEEECCCchhhHH-----------------
Confidence 0011122344599999999999999999999976899999999999999987432110
Q ss_pred cEEeeEEEEEEECCEEEEecCc
Q 010547 473 RRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 473 ~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
....|..||++|++|+++.-
T Consensus 384 --~~~~v~~v~~~G~~v~~~~~ 403 (408)
T 3be7_A 384 --TLEEVAFVMKEGKVYKREGH 403 (408)
T ss_dssp --GTTSCCEEEETTEEEEECCC
T ss_pred --HhhceeEEEECCEEEecccc
Confidence 00258999999999998753
No 34
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=6.5e-34 Score=286.62 Aligned_cols=356 Identities=15% Similarity=0.077 Sum_probs=219.6
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC---------
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--------- 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~--------- 112 (507)
+.+++|+|++|+|+++. ++|+|+||||++|++..+.+ +.++||++|++|+|||||+|+|+.....
T Consensus 4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~~----~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 77 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEGT----VKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKF 77 (403)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCSC----EEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTT
T ss_pred ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCCC----ccceEcCCCCEecccceeeeeccchhhcccccccccc
Confidence 46789999999987754 89999999999999865432 4579999999999999999999975432
Q ss_pred -CC-C------------------CChh----HHHHHHHhCCceEEEeCCCCCCCCCC--CHHHHHHHHHHHhcCceeeEE
Q 010547 113 -TE-W------------------EGFP----SGTKAAAAGGITTLIDMPLNSDPSTI--STETLKLKVDAAEKRIYVDVG 166 (507)
Q Consensus 113 -~~-~------------------~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~ 166 (507)
.. + +.+. .....++++||||+.++. ...+... ..+.+.+..+.........+.
T Consensus 78 ~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (403)
T 2qt3_A 78 WSRPYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHV-DVDSVAKTKAVEAVLEAKEELKDLIDIQVV 156 (403)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEE-ECSTTTTTHHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEE-cccCccccchHHHHHHHHHHhhcceeEEEE
Confidence 00 0 0011 135678899999997654 2222111 122222333332222222222
Q ss_pred Eecc-ccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhccc
Q 010547 167 FWGG-LVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (507)
Q Consensus 167 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 245 (507)
.... .....+...+.++++.+.|...++. +.+ ......+++++.++++.|++++.++.+|+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~p---~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~--------- 223 (403)
T 2qt3_A 157 AFAQSGFFVDLESESLIRKSLDMGCDLVGG-VDP---ATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGT--------- 223 (403)
T ss_dssp EECTTCTTTSTTHHHHHHHHHHTTCSEEEC-BCT---TTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHH---------
T ss_pred EcCCcccccCcchHHHHHHHHhcCCCeEEE-ecC---CCCCCChHHHHHHHHHHHHHcCCCeEEEeCCccc---------
Confidence 2110 0111223456667777777644432 211 2223456689999999999999999999954321
Q ss_pred CcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH-----HHHHHHHHHhCCCCEEEecc
Q 010547 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS-----SLDLLMEAKTNGDSITVETC 320 (507)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~-----~~~~i~~~~~~g~~i~~~~~ 320 (507)
.....++..++.+.+.+. +.+..+.|+...+. ..+.++.+++.|+.+.. |
T Consensus 224 ------------------~~~~~~~~~~~~~~~~g~-----~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~--~ 278 (403)
T 2qt3_A 224 ------------------VGVYSINRLAQKTIENGY-----KGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVT--C 278 (403)
T ss_dssp ------------------HHHHHHHHHHHHHHHTTC-----TTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEE--E
T ss_pred ------------------chhHHHHHHHHHHHHcCC-----CCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEE--C
Confidence 011234444555544311 23578899876311 13677777788876554 4
Q ss_pred cccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCC-chhhhHHH
Q 010547 321 PHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI-SSLQFVLP 399 (507)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 399 (507)
|.. + ....++.+++++|+++++|||+...... +.+. ..++. +.
T Consensus 279 p~~---------------------~--~~~~~~~~~~~~Gv~v~lgtD~~~~~~~------------~~g~~~~~~~-~~ 322 (403)
T 2qt3_A 279 FSS---------------------T--PPTMPVIKLLEAGINLGCASDNIRDFWV------------PFGNGDMVQG-AL 322 (403)
T ss_dssp TTT---------------------C--CTTCCHHHHHHTTCEEEEECCSCSSSSC------------SCCCCCHHHH-HH
T ss_pred CCC---------------------C--CCCCCHHHHHHcCCcEEEeCCCCCCCCC------------CCCCCCHHHH-HH
Confidence 420 0 0112345778889999999997521100 0011 11111 11
Q ss_pred HHHHHHH-hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeE
Q 010547 400 VTWSYGR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGK 478 (507)
Q Consensus 400 ~~~~~~~-~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (507)
....... ..+++++++++++|.|||+++|+++.|+|++||.||||++|.+++.. .....+.
T Consensus 323 ~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~g~i~~G~~ADlvv~d~~~~~~------------------~~~~~~~ 384 (403)
T 2qt3_A 323 IETQRLELKTNRDLGLIWKMITSEGARVLGIEKNYGIEVGKKADLVVLNSLSPQW------------------AIIDQAK 384 (403)
T ss_dssp HHHHHTTCCSHHHHHHHHHHTTHHHHHHHTCGGGCSSSTTSBCCEEEESSSSHHH------------------HHHHCCC
T ss_pred HHHHHhCcCCccCHHHHHHHHHHHHHHhcCCCcccCCCCCCcCCEEEEcCCChHH------------------HhhcCCC
Confidence 1110000 11268899999999999999999556999999999999999774221 1111236
Q ss_pred EEEEEECCEEEEecCccc
Q 010547 479 VLATISRGNLVYKEGNHA 496 (507)
Q Consensus 479 V~~v~v~G~~v~~~g~~~ 496 (507)
|..||++|++||++|+++
T Consensus 385 v~~v~v~G~~v~~~g~~~ 402 (403)
T 2qt3_A 385 RLCVIKNGRIIVKDEVIV 402 (403)
T ss_dssp EEEEEETTEEEEESSSBC
T ss_pred ccEEEECCEEEecCCccc
Confidence 999999999999999886
No 35
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=2.9e-33 Score=280.21 Aligned_cols=358 Identities=14% Similarity=0.124 Sum_probs=226.9
Q ss_pred ceEEEEecEE-ECCCC----ceeeeEEEeCCEEEEeecCCCCCCCCCC-CcEEecCCCEEecceeecccccCCCCCCCCC
Q 010547 43 NQYWLTSKRI-VTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKT-GQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE 116 (507)
Q Consensus 43 ~~~~i~n~~i-~~~~~----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~-~~viD~~g~~v~PGfID~H~H~~~~~~~~~~ 116 (507)
.+++|+|++| +++++ ..+++|+|+||||++|++....+. .+ .++||++|++|+|||||+|+|+....+....
T Consensus 2 ~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~~--~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~ 79 (386)
T 2vun_A 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKD--AGDATIIDAAGSTVTPGLLDTHVHVSGGDYAPRQ 79 (386)
T ss_dssp CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGTT--CTTCEEEECTTCEEEECEEEEEECCCSTTEEGGG
T ss_pred ccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccCC--CCCceEEcCCCCEEccceeeccccccCCCcChhH
Confidence 5789999999 99875 347899999999999997422111 24 6899999999999999999999753221100
Q ss_pred ChhHHHHHHHhCCceEEEeCCC---CCCCCCCCHHHHH--HHHHHHh--cC--ceeeEEEeccc--cCCCcccHHHHHHH
Q 010547 117 GFPSGTKAAAAGGITTLIDMPL---NSDPSTISTETLK--LKVDAAE--KR--IYVDVGFWGGL--VPENAYNASALEAL 185 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~---~~~p~~~~~~~~~--~~~~~~~--~~--~~~~~~~~~~~--~~~~~~~~~~~~~~ 185 (507)
......+.++++||||+++++. .+.+ ...+.+. ....... .. ....+ ..+. .... ...++++++
T Consensus 80 ~~~~~~~~~l~~GvTtv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~-~~~~~~~~~ 154 (386)
T 2vun_A 80 KTMDFISSALHGGVTTMISAGSPHFPGRP--KDAAGTKALAITLSKSYYNARPAGVKV--HGGAVILEKG-LTEEDFIEM 154 (386)
T ss_dssp TEESHHHHHHTTTEEEEEECCCTTSTTCC--CSHHHHHHHHHHHHHHHHHCCGGGCEE--ECCEECCCTT-CCHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEeccccccCCCh--hhHHHHHHHHHHhhcccccccccceee--ccCcccccCC-cCHHHHHHH
Confidence 1123688999999999999751 0222 2232232 2211111 00 00111 1111 1111 224677888
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 186 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
.+.|...++.+... +..+++.+.++++.|+++++++.+|+++..... . ..+
T Consensus 155 ~~~g~~~ik~~~~~------~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---------~-----------~~~--- 205 (386)
T 2vun_A 155 KKEGVWIVGEVGLG------TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG---------S-----------STV--- 205 (386)
T ss_dssp HHTTCCEEEEETSS------SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST---------T-----------CSC---
T ss_pred HHhCCCeEEEeecC------CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc---------c-----------CHH---
Confidence 88888888886421 236889999999999999999999996432100 0 000
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChh--HHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCC
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP 343 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~--~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 343 (507)
.+...++ . |.. .+.|+.... ...+.++.+++.|+.+.. +++ + +
T Consensus 206 --~i~~~~~----~-------G~~-~i~H~~~~~~~~~~~~~~~~~~~g~~vl~--~~~------~-----g-------- 250 (386)
T 2vun_A 206 --TADDVIK----T-------KPD-VVSHINGGPTAISVQEVDRIMDETDFAME--IVQ------C-----G-------- 250 (386)
T ss_dssp --CHHHHHH----H-------CCS-EEETTTCSSSCCCHHHHHHHHHHCCCEEE--EES------S-----S--------
T ss_pred --HHHHHHH----c-------CCC-EEEEccCCCCCCCHHHHHHHHHcCCeEEE--ecc------C-----C--------
Confidence 1122222 2 333 478876510 234567777777876511 111 0 0
Q ss_pred CCChhhHHHHHHHHhcCC--eeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhh
Q 010547 344 IRDAANKEKLWEALMDGH--IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSE 421 (507)
Q Consensus 344 ~~~~~~~~~~~~~l~~G~--~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~ 421 (507)
........+++++++|+ +++++||+..... ..+.+ . +...+..+.+.++|++++++++|.
T Consensus 251 -~~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~-----------~~~~g--~----~~~~~~~~~~~~ls~~~~~~~~T~ 312 (386)
T 2vun_A 251 -NPKIADYVARRAAEKGQLGRVIFGNDAPSGTG-----------LIPLG--I----LRNMCQIASMSDIDPEVAVCMATG 312 (386)
T ss_dssp -CHHHHHHHHHHHHHHTCGGGEEEECCBSBTTB-----------BCTTH--H----HHHHHHHHHHSCCCHHHHHHHHTH
T ss_pred -cccccHHHHHHHHHcCCCceeEEecCCCCCCC-----------CCcch--h----HHHHHHHHhhcCCCHHHHHHHHhH
Confidence 02345567888999999 8999999831100 00000 0 222233445679999999999999
Q ss_pred chhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE--eeEEEEEEECCEEEEecCcccCCC
Q 010547 422 RPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL--SGKVLATISRGNLVYKEGNHAPAA 499 (507)
Q Consensus 422 n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~V~~v~v~G~~v~~~g~~~~~~ 499 (507)
|||++||+ ++|+|++||.||||++|.+..+ + . .+++..+.. ...|..||++|++||++|+... .
T Consensus 313 n~A~~lgl-~~G~i~~G~~ADlvv~d~~~~~--~-~---------~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~-~ 378 (386)
T 2vun_A 313 NSTAVYGL-NTGVIAPGKEADLIIMDTPLGS--V-A---------EDAMGAIAAGDIPGISVVLIDGEAVVTKSRNTP-P 378 (386)
T ss_dssp HHHHHHTC-SCSSCSTTSBCCEEEEECBTTC--S-C---------SSHHHHHHHTCCCEEEEEEETTEEEESSCSSSC-C
T ss_pred HHHHHcCC-CceeeCCCCeeCEEEECCCccc--c-c---------chhHHHhhccCCCceeEEEECCEEEeecCcCCC-C
Confidence 99999999 7899999999999999987521 1 0 222222211 2379999999999999998876 5
Q ss_pred CCcc
Q 010547 500 CGSP 503 (507)
Q Consensus 500 ~~~~ 503 (507)
+|+.
T Consensus 379 ~~~~ 382 (386)
T 2vun_A 379 AKRA 382 (386)
T ss_dssp BSSC
T ss_pred CCcc
Confidence 5554
No 36
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=100.00 E-value=2.9e-34 Score=281.61 Aligned_cols=332 Identities=16% Similarity=0.184 Sum_probs=259.0
Q ss_pred CCCEEecceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCce--eeEEEec
Q 010547 92 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY--VDVGFWG 169 (507)
Q Consensus 92 ~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 169 (507)
++++|+||+||+|+|+.. +.. ....+.++++||||+++++ ++.|.....+.+....+.+..... .++..++
T Consensus 4 ~~~~v~PG~ID~HvH~~~-g~~-----~~e~~aa~~gGvTtvv~mp-nt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRD-GDM-----LKTVVPYTSEIYGRAIVMP-NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLM 76 (347)
T ss_dssp CCEEEEECCCEEEECCCS-HHH-----HHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEE
T ss_pred CCeEECCCcceeeecCCC-CCc-----hhhHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHhcccCCcccEEEEE
Confidence 467999999999999987 322 2345788999999999999 888998888888888777765433 4455545
Q ss_pred cccCCCcccHHHHHHHHHcCC-cEEEEcccCCCC-CCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCc
Q 010547 170 GLVPENAYNASALEALLNAGV-LGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 247 (507)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 247 (507)
++........+++..+.+.|+ .++|.|+.+.+. ++.+..+.+.+.++++.+++.+.++.+|+++.... +
T Consensus 77 ~~~~~~~~~~~ei~~l~~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~---~------ 147 (347)
T 2z26_A 77 TCYLTDSLDPNELERGFNEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD---I------ 147 (347)
T ss_dssp EEECCTTCCHHHHHHHHHTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT---S------
T ss_pred EEEeCCCCCHHHHHHHHHCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc---c------
Confidence 542222234678888888998 899999876532 23455688999999999999999999999865410 0
Q ss_pred CCccccccccCCCChhHHHHHHHHHH--HHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccc
Q 010547 248 LDTRSYSTYLKTRPPSWEEAAIRELL--TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325 (507)
Q Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~--~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~ 325 (507)
.+...|..++.+.+ .+.+. .+.++|+.|++++ ..++.++.++ .++++++||||+.
T Consensus 148 ------------~~~~~E~~~~~~~i~~~la~~-------~~~~~hi~Hvst~-~~~~~i~~ak---~~Vt~e~~ph~L~ 204 (347)
T 2z26_A 148 ------------DIFDREARFIESVMEPLRQRL-------TALKVVFEHITTK-DAADYVRDGN---ERLAATITPQHLM 204 (347)
T ss_dssp ------------CGGGHHHHHHHHTHHHHHHHS-------TTCCEEECSCCSH-HHHHHHHTSC---TTEEEEECHHHHH
T ss_pred ------------CHHHHHHHHHHHHHHHHHHhh-------cCCcEEEEECCcH-HHHHHHHHhC---CCceEeecchHhe
Confidence 01113555566665 35553 4889999999998 8888888764 5799999999999
Q ss_pred ccccCCC--CCCCceeEcCCCCChhhHHHHHHHHhcCCee-EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHH
Q 010547 326 FSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 402 (507)
Q Consensus 326 ~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~-~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 402 (507)
++.+++. ..++.++++||+|...+++.+++++.+|.++ +++||++|+....+.. ++. ..|+.+++..++.++
T Consensus 205 l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l~l~~ 279 (347)
T 2z26_A 205 FNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTALGSYA 279 (347)
T ss_dssp CCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHHHHHH
T ss_pred ecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHHHHHH
Confidence 9988874 3788899999999999999999999999999 8999999998776542 222 367778899898888
Q ss_pred HHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccc-cCcEEeeEEE
Q 010547 403 SYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAY-LGRRLSGKVL 480 (507)
Q Consensus 403 ~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~ 480 (507)
... +.++|++++++++|.|||++||+ +++|+| +|+ +..|.++.. .+.++.. ++|| .|..+.|.|.
T Consensus 280 ~~~-~~~~sl~~~v~~~s~nPAki~gl~~~kG~i--------~l~--~~~~~v~~~-~~~s~~~-~sPf~~G~~l~g~v~ 346 (347)
T 2z26_A 280 TVF-EEMNALQHFEAFCSVNGPQFYGLPVNDTFI--------ELV--REEQQVAES-IALTDDT-LVPFLAGETVRWSVK 346 (347)
T ss_dssp HHH-HHTTCGGGHHHHHHTHHHHHHTCCCCCCEE--------EEE--CCCEECCSC-EECSSSE-ECCTTTTCEESCEEC
T ss_pred HHh-hcCCCHHHHHHHHhHhHHHHhCCCCCCCeE--------EEE--cceEEEchh-hccccCC-cccccCCcEEEeEEe
Confidence 744 56789999999999999999999 457875 677 566888777 7888888 9999 7999988875
No 37
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=5.4e-34 Score=291.97 Aligned_cols=362 Identities=17% Similarity=0.134 Sum_probs=215.1
Q ss_pred CcceEEEEecEEECCCC--c-eeeeEEE-eCCEEEEeec--CCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC-
Q 010547 41 PYNQYWLTSKRIVTPKG--V-ISGAVEI-KEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT- 113 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~--~-~~~~I~I-~dG~I~~Vg~--~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~- 113 (507)
+..+++|+|++|+++++ + .+++|+| +||||++|++ ....+ .+.++||++|++|+|||||+|+|+..+...
T Consensus 11 ~~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~---~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 87 (458)
T 2p9b_A 11 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIP---AEYHYLDGTGKIVMPGLINAHTHLFSQGKPL 87 (458)
T ss_dssp CCCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCC---TTCEEEECTTCEEEECEEEEEECSCC-----
T ss_pred CCCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCC---CCCeEEECCCCEEccceeeeeeccccccccc
Confidence 45688999999999875 3 3689999 9999999997 33222 257899999999999999999999765422
Q ss_pred C---------------CC----------ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe
Q 010547 114 E---------------WE----------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168 (507)
Q Consensus 114 ~---------------~~----------~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (507)
. +. .+....+.++++||||+++++ +..+ ....+....+..... ..++...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g~~~-g~r~~~~ 162 (458)
T 2p9b_A 88 NPKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLG-DVGY---EVVTLRDQIDAGQIL-GPRILAS 162 (458)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTTEEEEEESC-CSSS---HHHHHHHHHHTTSSC-CCEEECC
T ss_pred cccccchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCC-CCcc---ccHHHHHHHHcCCCC-CCeEEec
Confidence 0 11 133456788999999999985 2211 112222222111100 0122211
Q ss_pred cc------ccC--------CC-cccHHHHHHHHHcCCcEEEEcccCC--C-----CCCCCCCCHHHHHHHHHHHHhcCCc
Q 010547 169 GG------LVP--------EN-AYNASALEALLNAGVLGLKSFMCPS--G-----INDFPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 169 ~~------~~~--------~~-~~~~~~~~~~~~~g~~~~~~~~~~~--~-----~~~~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
+. ... .. ....+.+++..+.|...+|.+.... . ..+.+..+++.+.++++.|+++|++
T Consensus 163 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 242 (458)
T 2p9b_A 163 GPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVI 242 (458)
T ss_dssp CSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCC
T ss_pred ccccccCCCCCccccCccCCCHHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCe
Confidence 11 100 01 1112345555667888888875311 0 1134567899999999999999999
Q ss_pred EEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHH
Q 010547 227 LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLM 306 (507)
Q Consensus 227 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~ 306 (507)
+.+|+++.. .+...++. |. ..+.|+... ..+.++
T Consensus 243 v~~H~~~~~--------------------------------~i~~~~~~-----------G~-~~i~H~~~~--~~~~~~ 276 (458)
T 2p9b_A 243 VGAHAQSPE--------------------------------GVRRSLLA-----------GV-DTIEHGSVL--DDELIG 276 (458)
T ss_dssp EEEEECSHH--------------------------------HHHHHHHH-----------TC-SEEEECCCC--CHHHHH
T ss_pred EEEEeCCHH--------------------------------HHHHHHHc-----------CC-CEEEECCCC--CHHHHH
Confidence 999995422 12222222 22 235666652 234677
Q ss_pred HHH------hCCCCEEEeccccc--ccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCC-CChhhh
Q 010547 307 EAK------TNGDSITVETCPHY--LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELK 377 (507)
Q Consensus 307 ~~~------~~g~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~-~~~~~~ 377 (507)
.++ +.|+.+.....+.. ...... ...........++.+.......+.+++++|+++++|||+.+ +...
T Consensus 277 ~~~~~~~~~~~g~~v~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~-- 353 (458)
T 2p9b_A 277 MFRHNPNALRGYSALIPTLSAGLPLTLLGQD-VTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQ-- 353 (458)
T ss_dssp HHHCCTTSTTSCCEEECCHHHHHHHHHSCHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCT--
T ss_pred HHhcccccccCCeEEEeecchhhHHHhhhcc-cccCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcc--
Confidence 777 77865421111110 001100 00000000000001112334567888999999999999642 1110
Q ss_pred ccccCCccccCCCCchhhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeC
Q 010547 378 LLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELD 455 (507)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~ 455 (507)
+. +...+....+ .++|++++++++|.|||+++|+ +++|+|++||.|||||+|.++..++
T Consensus 354 ------------~~------~~~e~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~~~- 414 (458)
T 2p9b_A 354 ------------YA------TWRELELLVAYAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDL- 414 (458)
T ss_dssp ------------TC------HHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCG-
T ss_pred ------------cc------HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchhCH-
Confidence 00 1111223334 5899999999999999999999 5689999999999999998742210
Q ss_pred CCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec--Cccc
Q 010547 456 NDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE--GNHA 496 (507)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~--g~~~ 496 (507)
.....|..||++|++||++ +++.
T Consensus 415 ------------------~~~~~v~~v~v~G~~v~~~~~~~~~ 439 (458)
T 2p9b_A 415 ------------------RALEHPALVIAAGHPVWRPGPKRFA 439 (458)
T ss_dssp ------------------GGGTSCSEEEETTEECCSCCCCCCH
T ss_pred ------------------HHhccceEEEECCEEEecCchhhhh
Confidence 0002689999999999987 6654
No 38
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=1.2e-33 Score=287.13 Aligned_cols=364 Identities=17% Similarity=0.214 Sum_probs=217.9
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC------
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW------ 115 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~------ 115 (507)
+++++|+|++|+|++ .+++|+|+||||++||+..+.+ +.+.++||++|++|+|||||+|+|+........
T Consensus 7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~--~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~ 82 (430)
T 1ra0_A 7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVM--PITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQS 82 (430)
T ss_dssp -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCC--CCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSS
T ss_pred CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCC--CCCcceEccCCCEecccccccccchhhhhhcCCCcCCCC
Confidence 356899999999987 6889999999999999865432 126789999999999999999999965321110
Q ss_pred -------------------CChh----HHHHHHHhCCceEEEeCCCCC-CCCCCCHHHHHHHHHHHhc-CceeeEEEec-
Q 010547 116 -------------------EGFP----SGTKAAAAGGITTLIDMPLNS-DPSTISTETLKLKVDAAEK-RIYVDVGFWG- 169 (507)
Q Consensus 116 -------------------~~~~----~~~~~~l~~GvTt~~~~~~~~-~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 169 (507)
+.+. .....++++||||+.+++ +. .|. ...+....+.... +..+.+....
T Consensus 83 ~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (430)
T 1ra0_A 83 GTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHV-DVSDAT---LTALKAMLEVKQEVAPWIDLQIVAF 158 (430)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEE-ECCSTT---CHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCHHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeecc-ccCChH---HHHHHHHHHHHHhhhhhEEEEEEec
Confidence 1111 223556899999999875 22 222 1122222222111 2233332211
Q ss_pred cc--cCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCC---CCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhc
Q 010547 170 GL--VPENAYNASALEALLNAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKL 243 (507)
Q Consensus 170 ~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~ 243 (507)
.. ....+...+.++++.+.|...+.. . . . .+. .+++.++++++.|+++|.++.+|+.+... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~---~-~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~---- 228 (430)
T 1ra0_A 159 PQEGILSYPNGEALLEEALRLGADVVGA-I-P---H-FEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSR---- 228 (430)
T ss_dssp CTTCSSSSTTHHHHHHHHHHTTCSEECC-C-G---G-GSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCC----
T ss_pred CCcccccCchHHHHHHHHHHhCCCeEee-e-e---c-ccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHH----
Confidence 00 001223345567777766433321 1 1 1 122 57889999999999999999999954321 000
Q ss_pred ccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH-----HHHHHHHHHhCCCCEEEe
Q 010547 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS-----SLDLLMEAKTNGDSITVE 318 (507)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~-----~~~~i~~~~~~g~~i~~~ 318 (507)
.+....+...+.+ . +.+.++.|+...+. ..+.++.+++.|+.+.
T Consensus 229 ------------------------~~~~~~~~~~~~g----~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~-- 277 (430)
T 1ra0_A 229 ------------------------FVETVAALAHHEG----M-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFV-- 277 (430)
T ss_dssp ------------------------HHHHHHHHHHHHT----C-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEE--
T ss_pred ------------------------HHHHHHHHHHHhC----C-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEE--
Confidence 0112222333221 0 44577888765311 2257777878886544
Q ss_pred ccccc-ccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH
Q 010547 319 TCPHY-LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV 397 (507)
Q Consensus 319 ~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (507)
+||+. ..+.. .. . ..|+.+.. ..+.+++++|+++++|||+.+..... ......++.
T Consensus 278 ~~p~~~~~~~~-~~---~----~~p~~~~~---~~~~~~~~~Gv~~~lgTD~~~~~~~~-----------~~~~~~~~~- 334 (430)
T 1ra0_A 278 ANPLVNIHLQG-RF---D----TYPKRRGI---TRVKEMLESGINVCFGHDGVFDPWYP-----------LGTANMLQV- 334 (430)
T ss_dssp ECHHHHHHHTT-TT---C----CSSCCCCC---CCHHHHHHTTCCEEECCBCSSBTTBS-----------CCCCCHHHH-
T ss_pred ECchhhhhhcc-cc---C----CCCCcCCC---CCHHHHHHCCCEEEEeCCCCcccCCC-----------CCCCCHHHH-
Confidence 46642 22211 00 0 12333222 23567788999999999986411000 000111111
Q ss_pred HHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe
Q 010547 398 LPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS 476 (507)
Q Consensus 398 l~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (507)
+........ ..++|++++++++|.|||+++|+++ |+|++||.||||++|.+.++.. + ...
T Consensus 335 ~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~-G~i~~G~~ADlvv~d~~~~~~~-----~-------------~~~ 395 (430)
T 1ra0_A 335 LHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQD-YGIAAGNSANLIILPAENGFDA-----L-------------RRQ 395 (430)
T ss_dssp HHHHHHHTTCCSHHHHHGGGGGGTHHHHHHTTCSS-CSSCTTSBCCEEEESSSSHHHH-----H-------------HHT
T ss_pred HHHHHHHHccCCcccHHHHHHHHHHHHHHHhCCCC-cccCCCCcCCEEEEcCCChhHH-----H-------------hcc
Confidence 111111100 0135899999999999999999966 9999999999999998754310 0 012
Q ss_pred eEEEEEEECCEEEEecCccc
Q 010547 477 GKVLATISRGNLVYKEGNHA 496 (507)
Q Consensus 477 ~~V~~v~v~G~~v~~~g~~~ 496 (507)
+.|..||++|++||++|+++
T Consensus 396 ~~v~~v~~~G~~v~~~~~~~ 415 (430)
T 1ra0_A 396 VPVRYSVRGGKVIASTQPAQ 415 (430)
T ss_dssp CCCSEEEETTEEEEECCCCC
T ss_pred CcceEEEECCEEEecCCcce
Confidence 36899999999999999887
No 39
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=1.6e-33 Score=291.80 Aligned_cols=357 Identities=22% Similarity=0.265 Sum_probs=229.3
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC-------C--CCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP-------R--NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~-------~--~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..+++|+|++|+|++++.+++|+|+||||++|++...+. . ...+.++||++|++|+|||||+|+|+..+.
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p~- 143 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ- 143 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCTT-
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCcH-
Confidence 568999999999987777899999999999999864321 0 123578999999999999999999987532
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCC------CCC--HHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPS------TIS--TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEA 184 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (507)
..+.++++||||+++++ +.|. ... ...+....+.... ..+++.+++... ....+.+.+
T Consensus 144 --------~~~~al~~GvTTv~d~g--~~p~~~t~~~~~~~g~~~l~~~~~a~~~-~~~~~~~~g~g~---~~~~~~l~e 209 (569)
T 1e9y_B 144 --------QIPTAFASGVTTMIGGG--TGPADGTNATTITPGRRNLKWMLRAAEE-YSMNLGFLAKGN---ASNDASLAD 209 (569)
T ss_dssp --------HHHHHHHTTEEEEEEEC--CSSCHHHHHCCCCCHHHHHHHHHHHHTT-SSSEEEEEEECC---CSCHHHHHH
T ss_pred --------HHHHHHhCCeeEEEcCC--cCCCCCCcCcccCCcHHHHHHHHHHhcc-cCceEEEECCCC---cCCHHHHHH
Confidence 26789999999999974 2221 111 3345555554443 345665544321 234567888
Q ss_pred HHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhH
Q 010547 185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 264 (507)
Q Consensus 185 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 264 (507)
+.+.|+.+++.+.. +..+++++.++++.|++++.++.+|++..... +
T Consensus 210 ~~~~Ga~gik~~~~-------~~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~-----------g--------------- 256 (569)
T 1e9y_B 210 QIEAGAIGFKIHED-------WGTTPSAINHALDVADKYDVQVAIHTDTLNEA-----------G--------------- 256 (569)
T ss_dssp HHHTTCSEEEECGG-------GCCCHHHHHHHHHHHHHTTCEEEECCCTTCSS-----------C---------------
T ss_pred HHHcCCCEEEecCC-------CCCCHHHHHHHHHHHHHhCCEEEEEcCCcccc-----------h---------------
Confidence 88899999998642 24789999999999999999999999642210 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHH---HHHHHHHHhCCCCEEEecccccccccccCCCCC-CC---c
Q 010547 265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---LDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG-DT---R 337 (507)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~---~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~-~~---~ 337 (507)
.+...+. ... |.++|+.|++.. .. .+.++.+++.|+.. ...++++.++.+..... +. .
T Consensus 257 ---~~~~~la--~~~-------g~~~hi~H~~~~-~~~~~~d~I~~~~~~gv~~--~~~~ptl~~t~~~~~~~~d~~~v~ 321 (569)
T 1e9y_B 257 ---CVEDTMA--AIA-------GRTMHTFHTEGA-GGGHAPDIIKVAGEHNILP--ASTNPTIPFTVNTEAEHMDMLMVC 321 (569)
T ss_dssp ---CHHHHHH--HHT-------TCCEEETTTTST-TSCSTTTGGGGGGSTTEEE--EECGGGCSCBTTHHHHHHHHHHHT
T ss_pred ---HHHHHHH--HHc-------CCCEEEEEcccC-cccccHHHHHHHHHcCCee--EeeCCccccccchhhhhhchhhhh
Confidence 0011111 111 677999999875 32 56777777777522 22233333322211000 00 0
Q ss_pred eeEcCCC---------CChhhHHHHHHHHh-cCCeeEEeCCCCCCChhh-hccccCCccccCCCCchhhhHHHHHH----
Q 010547 338 FKCAPPI---------RDAANKEKLWEALM-DGHIDMLSSDHSPTVPEL-KLLDEGNFLKAWGGISSLQFVLPVTW---- 402 (507)
Q Consensus 338 ~~~~p~~---------~~~~~~~~~~~~l~-~G~~~~lgtD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~---- 402 (507)
....+++ +.......+++.+. .|+++++|||+.+..... ...+ .+ . ....+....
T Consensus 322 h~l~~~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~---~~------~-~~~~~~~~~G~l~ 391 (569)
T 1e9y_B 322 HHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITR---TW------Q-TADKNKKEFGRLK 391 (569)
T ss_dssp TTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHH---HH------H-HHHHHHHHHCSCS
T ss_pred hhcCcccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCcccccccc---hh------h-HHHHhHhhccCcc
Confidence 0011111 01123455566666 699999999998654210 0000 00 0 000000000
Q ss_pred -HHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEE
Q 010547 403 -SYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVL 480 (507)
Q Consensus 403 -~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 480 (507)
....+.+++++++++++|.|||+++|+ +++|+|++||.||||+||++.. . .++.
T Consensus 392 ~~~~~~~~ls~~~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~------------~------------~~v~ 447 (569)
T 1e9y_B 392 EEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF------------G------------VKPN 447 (569)
T ss_dssp SCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT------------T------------TCCS
T ss_pred hhhccccCCCHHHHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc------------C------------CCcc
Confidence 001234588999999999999999999 5689999999999999997631 1 1578
Q ss_pred EEEECCEEEEec-Ccc
Q 010547 481 ATISRGNLVYKE-GNH 495 (507)
Q Consensus 481 ~v~v~G~~v~~~-g~~ 495 (507)
.||++|++||.+ |..
T Consensus 448 ~v~~~G~iv~~~~g~~ 463 (569)
T 1e9y_B 448 MIIKGGFIALSQMGDA 463 (569)
T ss_dssp EEEETTEEEEEEECCT
T ss_pred EEEECCEEEEcCCCCc
Confidence 999999999976 553
No 40
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=100.00 E-value=2.1e-32 Score=274.23 Aligned_cols=362 Identities=21% Similarity=0.254 Sum_probs=218.5
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC---CCCh
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---WEGF 118 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~---~~~~ 118 (507)
+..++|+|++|++++...+++|+|+||||++|++....+ ...+.++||++|++|+|||||+|+|+...+... ..+.
T Consensus 7 ~~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~-~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~ 85 (390)
T 1onw_A 7 AGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSD-IVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTP 85 (390)
T ss_dssp GCCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTT-SSSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBCC
T ss_pred cceEEEECcEEECCCCCccceEEEECCEEEEEecCcccC-CCCCCeEEeCCCCEECcCeeEeeECccccCccccccccCH
Confidence 346899999999988766889999999999999764321 112568999999999999999999985432110 1112
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC-C--cccHHHHHHHHHcCCcEEEE
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-N--AYNASALEALLNAGVLGLKS 195 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~ 195 (507)
....+.++++||||+++++ ++.+.....+.+....+.+...+...+...+++... . ......-.... ....+++.
T Consensus 86 ~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 163 (390)
T 1onw_A 86 EVALSRLTEAGVTSVVGLL-GTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAII-DRVIGVKC 163 (390)
T ss_dssp CCCHHHHHHTTEEEEEECC-CSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHHHHC-TTEEEEEE
T ss_pred HHHHHHHHHCCeeEEecCC-CcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchhhhH-HHhhccee
Confidence 2346788999999999987 555555555555554444433222223322222111 1 11111111111 11223333
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcCC------cEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHH
Q 010547 196 FMCPSGINDFPMTNASHIKEGLSVLARYKR------PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAI 269 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 269 (507)
.+.+ ...+..+.+++.++.+.++..+. .+.+|...... .+
T Consensus 164 ~~~~---~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~-------------------------------~~ 209 (390)
T 1onw_A 164 AISD---HRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKK-------------------------------AL 209 (390)
T ss_dssp EESS---TTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTT-------------------------------TT
T ss_pred eecC---CCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHH-------------------------------HH
Confidence 3322 22345788899888887765432 35667621110 11
Q ss_pred HHHHHHHHhhccCCCCCCce---EEEEecCChhHHH-HHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCC
Q 010547 270 RELLTVAKDTRTDGPAEGAH---LHIVHLSDASSSL-DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 345 (507)
Q Consensus 270 ~~~~~l~~~~~~~~~~~g~~---~~~~h~~~~~~~~-~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 345 (507)
+...++.+.. +.+ .+..|+...+... +.++.+++.+. .... ++ .+|+
T Consensus 210 ~~~~~~~~~g-------~~~v~~l~~~h~~~~~~~~~~~~~~~~~~~~-~~~~-~~------------------~~~~-- 260 (390)
T 1onw_A 210 QPIYDLLENC-------DVPISKLLPTHVNRNVPLFEQALEFARKGGT-IDIT-SS------------------IDEP-- 260 (390)
T ss_dssp HHHHHHHHTC-------CCCGGGEEEECGGGSHHHHHHHHHHHHTTCC-EEEE-TT------------------CCSS--
T ss_pred HHHHHHHhcc-------CCceEEeeccccccCHHHHHHHHHHHhcCCc-cccc-cc------------------cCCC--
Confidence 2333333321 222 2335654331222 34444444332 1111 11 1122
Q ss_pred ChhhHHHHHHHHhcCCe---eEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 010547 346 DAANKEKLWEALMDGHI---DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSER 422 (507)
Q Consensus 346 ~~~~~~~~~~~l~~G~~---~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n 422 (507)
......++++++.|+. ++++||+.+...... ..+.. ...++.+....+..+...+...+++++++++++|.|
T Consensus 261 -~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~--~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~n 335 (390)
T 1onw_A 261 -VAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFD--DEGNL--THIGVAGFETLLETVQVLVKDYDFSISDALRPLTSS 335 (390)
T ss_dssp -SCHHHHHHHHHHTTCCGGGEEEECCBTCC-----------------CCCCSHHHHHHHHHHHHHHCCCHHHHHGGGTHH
T ss_pred -CcCHHHHHHHHHcCCCccceEEEccCCCCCcccC--Ccccc--ccccCCCHHHHHHHHHHHHHHcCCCHHHHHHHHhHH
Confidence 2456778899999973 699999875422110 01111 223555566666665555557799999999999999
Q ss_pred hhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccCCCCCc
Q 010547 423 PAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGS 502 (507)
Q Consensus 423 ~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~~~~~~ 502 (507)
||++||++++|+|++|++|||+++|.+ + .|..||++|++||++|+++.. |+
T Consensus 336 pA~~~gl~~~G~i~~G~~ADlvv~d~~--~-------------------------~v~~v~~~G~~v~~~g~~~~~--g~ 386 (390)
T 1onw_A 336 VAGFLNLTGKGEILPGNDADLLVMTPE--L-------------------------RIEQVYARGKLMVKDGKACVK--GT 386 (390)
T ss_dssp HHHHTTCTTCSSCCTTSBCCEEEECTT--C-------------------------CEEEEEETTEEEEETTEESSC--CT
T ss_pred HHHHhCCCCCcccCCCCcCCEEEEcCC--C-------------------------cEEEEEECCEEEEECCeEccc--cc
Confidence 999999966899999999999999965 1 478999999999999999864 77
Q ss_pred c
Q 010547 503 P 503 (507)
Q Consensus 503 ~ 503 (507)
|
T Consensus 387 ~ 387 (390)
T 1onw_A 387 F 387 (390)
T ss_dssp T
T ss_pred c
Confidence 6
No 41
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=6e-34 Score=290.16 Aligned_cols=352 Identities=21% Similarity=0.241 Sum_probs=223.8
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC---------CCCCCCcEEecCCCEEecceeecccccCCCC
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~---------~~~~~~~viD~~g~~v~PGfID~H~H~~~~~ 111 (507)
...+++|+|++|+|++++..++|+|+||||++|++..... ....+.++||++|++|+|||||+|+|+..++
T Consensus 65 ~~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg 144 (570)
T 4ac7_C 65 NVLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPD 144 (570)
T ss_dssp TBCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTT
T ss_pred CCCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCcc
Confidence 3678999999999988888999999999999999864321 0113678999999999999999999987643
Q ss_pred CCCCCChhHHHHHHHhCCceEEEeCCC------CCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHH
Q 010547 112 RTEWEGFPSGTKAAAAGGITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185 (507)
Q Consensus 112 ~~~~~~~~~~~~~~l~~GvTt~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (507)
. .+.++++||||+++.+. ++.|.......+....+.++ ...+++.+++.... ...+++.++
T Consensus 145 ~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ac7_C 145 Q---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp H---------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCC---SSHHHHHHH
T ss_pred h---------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhh-hCCeeEEEEeccCC---cCHHHHHHH
Confidence 2 36789999999996421 11222333455555555544 45688888775432 346788888
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 186 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
.+.|+.+++.+..+ ..+++.+.++++.|++++.++.+|+++....
T Consensus 212 ~~aGa~gfK~~~~~-------~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~---------------------------- 256 (570)
T 4ac7_C 212 IDAGAAGLKIHEDW-------GATPASIDRSLTVADEADVQVAIHSDTLNEA---------------------------- 256 (570)
T ss_dssp HHHTCCEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSS----------------------------
T ss_pred HHcCCCeEeeccCC-------CCCHHHHHHHHHHHHHcCCEEEEEcCCcchh----------------------------
Confidence 89999999997532 4689999999999999999999999743210
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHH---HHHHHHHHhCCCCEEEecccccccccccCCCCC----CCce
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---LDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRF 338 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~---~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~----~~~~ 338 (507)
..+.+.++... +..+|..|..+. .. .+.++.+...++..+ ...|. ..++.+.+... ....
T Consensus 257 -g~Vedalea~~---------Gr~ih~~HiEga-g~~hapd~i~~~~~~~vlps-~t~Pt-~p~~~n~~~e~ld~l~v~h 323 (570)
T 4ac7_C 257 -GFLEDTLRAIN---------GRVIHSFHVEGA-GGGHAPDIMAMAGHPNVLPS-STNPT-RPFTVNTIDEHLDMLMVCH 323 (570)
T ss_dssp -CCHHHHHHHHT---------TCCEEETTTTST-TSSSTTTGGGGGGSTTEEEB-CCGGG-SSCBTTHHHHHHHHHHHHT
T ss_pred -hHHHHHHHHhC---------CCcceeEeeecc-ccccChHHHHHhccCCcccc-ccCCC-CCcccchhHHhhhheeeec
Confidence 01123333322 666788887653 11 233443333332211 00111 00000000000 0000
Q ss_pred eEcCCC---------C-ChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-H--
Q 010547 339 KCAPPI---------R-DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-G-- 405 (507)
Q Consensus 339 ~~~p~~---------~-~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-- 405 (507)
...|.+ | ..........++..|+.++++||......... .....+...... .
T Consensus 324 hl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge---------------~~~~~~~~a~~~~~~r 388 (570)
T 4ac7_C 324 HLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGE---------------MVLRTWQTADKMKKQR 388 (570)
T ss_dssp TCCTTCHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTC---------------HHHHHHHHHHHHHHHH
T ss_pred ccCccccchhHHHHhhhhhhhcccccchhhcCCEEEEECcccccCCcCc---------------ccCcHHHHHHHHHHhc
Confidence 001111 0 11223344567778999999999764321100 000001100000 0
Q ss_pred --------HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe
Q 010547 406 --------RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS 476 (507)
Q Consensus 406 --------~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (507)
.+.+++++++++++|.|||+++|+ +++|+|++||.||||+||.+. + . .
T Consensus 389 g~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~---------~--~-~----------- 445 (570)
T 4ac7_C 389 GPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKF---------F--G-V----------- 445 (570)
T ss_dssp CSCTTCCTTCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGG---------T--T-T-----------
T ss_pred CCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchh---------c--c-C-----------
Confidence 122368899999999999999999 668999999999999999652 1 0 1
Q ss_pred eEEEEEEECCEEEEec
Q 010547 477 GKVLATISRGNLVYKE 492 (507)
Q Consensus 477 ~~V~~v~v~G~~v~~~ 492 (507)
+|..||++|++||+.
T Consensus 446 -~v~~t~~~G~~v~~~ 460 (570)
T 4ac7_C 446 -KADRVIKGGIIAYAQ 460 (570)
T ss_dssp -SCSEEEETTEEEEEE
T ss_pred -ceEEEEECCEEEEcc
Confidence 578999999999975
No 42
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=6e-34 Score=290.16 Aligned_cols=352 Identities=21% Similarity=0.241 Sum_probs=223.6
Q ss_pred CcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC---------CCCCCCcEEecCCCEEecceeecccccCCCC
Q 010547 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~---------~~~~~~~viD~~g~~v~PGfID~H~H~~~~~ 111 (507)
...+++|+|++|+|++++..++|+|+||||++|++..... ....+.++||++|++|+|||||+|+|+..++
T Consensus 65 ~~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg 144 (570)
T 4ubp_C 65 NVLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPD 144 (570)
T ss_dssp TBCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTT
T ss_pred CCCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCcc
Confidence 3678999999999988888999999999999999864321 0113678999999999999999999987643
Q ss_pred CCCCCChhHHHHHHHhCCceEEEeCCC------CCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHH
Q 010547 112 RTEWEGFPSGTKAAAAGGITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185 (507)
Q Consensus 112 ~~~~~~~~~~~~~~l~~GvTt~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (507)
. .+.++++||||+++.+. ++.|.......+....+.++ ...+++.+++.... ...+++.++
T Consensus 145 ~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ubp_C 145 Q---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp H---------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCC---SSHHHHHHH
T ss_pred h---------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhh-hCCeeEEEEeccCC---cCHHHHHHH
Confidence 2 36789999999996421 11222233455555555544 45688888775432 346788888
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 186 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
.+.|+.+++.+..+ ..+++.+.++++.|++++.++.+|+++....
T Consensus 212 ~~aGa~gfK~~~~~-------~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~---------------------------- 256 (570)
T 4ubp_C 212 IDAGAAGLKIHEDW-------GATPASIDRSLTVADEADVQVAIHSDTLNEA---------------------------- 256 (570)
T ss_dssp HHHTCCEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSS----------------------------
T ss_pred HHcCCCeEeeccCC-------CCCHHHHHHHHHHHHHcCCEEEEEcCCcchh----------------------------
Confidence 89999999997532 4689999999999999999999999743210
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHH---HHHHHHHHhCCCCEEEecccccccccccCCCCC----CCce
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---LDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRF 338 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~---~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~----~~~~ 338 (507)
..+.+.++... +..+|..|..+. .. .+.++.+...++..+ ...|. ..++.+.+... ....
T Consensus 257 -g~Vedalea~~---------Gr~ih~~HiEga-g~~hapd~i~~~~~~~vlps-~t~Pt-~p~~~n~~~e~ld~l~v~h 323 (570)
T 4ubp_C 257 -GFLEDTLRAIN---------GRVIHSFHVEGA-GGGHAPDIMAMAGHPNVLPS-STNPT-RPFTVNTIDEHLDMLMVCH 323 (570)
T ss_dssp -CCHHHHHHHHT---------TCCEEETTTTST-TSSSTTTGGGGGGSTTEEEB-CCSTT-SSCBTTHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHhC---------CCceeEEEeccc-ccccChHHHHHhccCCcccc-ccCCC-CCcccchhHHhhhheeeec
Confidence 01123333322 666788887653 11 233443333332111 00111 00000000000 0000
Q ss_pred eEcCCC---------C-ChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-H--
Q 010547 339 KCAPPI---------R-DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-G-- 405 (507)
Q Consensus 339 ~~~p~~---------~-~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-- 405 (507)
...|.+ | ..........++..|+.++++||......... .....+...... .
T Consensus 324 hl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge---------------~~~~~~~~a~~~~~~r 388 (570)
T 4ubp_C 324 HLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGE---------------MVLRTWQTADKMKKQR 388 (570)
T ss_dssp TCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTC---------------HHHHHHHHHHHHHHHH
T ss_pred ccCccccchhHHHHhhhhhhccccccchhhcCCEEEEECcccccCCcCc---------------ccCcHHHHHHHHHHhc
Confidence 001111 0 11223344567778999999999764321100 000001100000 0
Q ss_pred --------HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEe
Q 010547 406 --------RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS 476 (507)
Q Consensus 406 --------~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (507)
.+.+++++++++++|.|||+++|+ +++|+|++||.||||+||.+. + . .
T Consensus 389 g~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~---------~--~-~----------- 445 (570)
T 4ubp_C 389 GPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKF---------F--G-V----------- 445 (570)
T ss_dssp CSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGG---------T--T-T-----------
T ss_pred CCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECccc---------c--c-C-----------
Confidence 112367899999999999999999 668999999999999999652 1 0 1
Q ss_pred eEEEEEEECCEEEEec
Q 010547 477 GKVLATISRGNLVYKE 492 (507)
Q Consensus 477 ~~V~~v~v~G~~v~~~ 492 (507)
+|..||++|++||+.
T Consensus 446 -~v~~t~~~G~~v~~~ 460 (570)
T 4ubp_C 446 -KADRVIKGGIIAYAQ 460 (570)
T ss_dssp -SCSEEEETTEEEEEE
T ss_pred -CeeEEEECCEEEEec
Confidence 578999999999975
No 43
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=4.7e-33 Score=281.98 Aligned_cols=343 Identities=18% Similarity=0.189 Sum_probs=198.8
Q ss_pred ceEEEEe-cEEECCCC--------------ceeeeEEEeCCEEEEeecCC-C--CCCCCCCCcEEecCCCEEecceeecc
Q 010547 43 NQYWLTS-KRIVTPKG--------------VISGAVEIKEGNIISIVSEE-D--WPRNSKTGQVVDYGEAVIMPGLIDVH 104 (507)
Q Consensus 43 ~~~~i~n-~~i~~~~~--------------~~~~~I~I~dG~I~~Vg~~~-~--~~~~~~~~~viD~~g~~v~PGfID~H 104 (507)
.+++|+| ++|+|+++ +.+++|+|+||||++||+.. . .+ ..++||++|++|+|||||+|
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~----~~~viD~~G~~v~PGfID~H 80 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE----ADEIIDCSGRLVTPGLVDPH 80 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTCE----EEEEEECTTCEEEECEEECC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccCC----CCeEEeCCCCEeccCeeccC
Confidence 5789999 99998753 34789999999999999764 2 21 35799999999999999999
Q ss_pred cccCCCCCCCC---------------------------------CChh----HHHHHHHhCCceEEEeCCCCCCCCCCC-
Q 010547 105 AHLDDPGRTEW---------------------------------EGFP----SGTKAAAAGGITTLIDMPLNSDPSTIS- 146 (507)
Q Consensus 105 ~H~~~~~~~~~---------------------------------~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~~~- 146 (507)
+|+........ +.+. ...+.++++||||+.+.. ........
T Consensus 81 ~H~~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~-~~~~~~~~~ 159 (421)
T 2bb0_A 81 THLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKS-GYGLEKETE 159 (421)
T ss_dssp BCCCCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEEC-CSCCSHHHH
T ss_pred cCccccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEecc-ccCcCccch
Confidence 99975432110 0011 123677899999999753 11110000
Q ss_pred HHHHHHHHHHHhc-CceeeEEEeccccCCCcc----cHHHHH-------HHHHcC-CcEEEEcccCCCCCCCCCCCHHHH
Q 010547 147 TETLKLKVDAAEK-RIYVDVGFWGGLVPENAY----NASALE-------ALLNAG-VLGLKSFMCPSGINDFPMTNASHI 213 (507)
Q Consensus 147 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~-------~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l 213 (507)
...+....+.... ...+.....+ ....++. ..+.++ .+...+ ...++.+. +.+..+.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~e~l 232 (421)
T 2bb0_A 160 LKQLRVAKKLHESQPVDLVSTFMG-AHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT------ETGVFTVSQS 232 (421)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEEE-ESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB------CTTSBCHHHH
T ss_pred HHHHHHHHHHHhhcCceEEEEeec-cccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC------CcCCCCHHHH
Confidence 1111121111111 2222221111 1111110 011111 111222 22232221 1234688999
Q ss_pred HHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEE
Q 010547 214 KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIV 293 (507)
Q Consensus 214 ~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~ 293 (507)
+++++.|+++|.++.+|+..... . . .++. ..+. +. ..+.
T Consensus 233 ~~~~~~a~~~g~~v~~H~~~~~~-----------------------~-~-----~~~~----~~~~-------g~-~~~~ 271 (421)
T 2bb0_A 233 RRYLQKAAEAGFGLKIHADEIDP-----------------------L-G-----GAEL----AGKL-------KA-VSAD 271 (421)
T ss_dssp HHHHHHHHHTTCEEEEEECSSSC-----------------------C-S-----HHHH----HHHT-------TC-SEEE
T ss_pred HHHHHHHHHCCCCEEEEeccccc-----------------------c-C-----HHHH----HHHc-------CC-cEEh
Confidence 99999999999999999843210 0 0 1111 1111 21 2356
Q ss_pred ecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC-
Q 010547 294 HLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT- 372 (507)
Q Consensus 294 h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~- 372 (507)
|+.. -..+.++.+.+.|+.+ .+||..... +. +. ...++.+++++|+.+++|||+.+.
T Consensus 272 H~~~--~~~~~i~~~~~~g~~~--~~~p~~~~~----l~--~~------------~~~~~~~~~~~Gv~v~lgtD~~~~~ 329 (421)
T 2bb0_A 272 HLVG--TSDEGIKKLAEAGTIA--VLLPGTTFY----LG--KS------------TYARARAMIDEGVCVSLATDFNPGS 329 (421)
T ss_dssp ECTT--CCHHHHHHHHHHTCEE--EECHHHHHH----TT--CC------------CCCCHHHHHHTTCCEEECCCBBTTT
T ss_pred hhhc--CCHHHHHHHHHcCCeE--EECCchhhh----hc--cc------------ccchHHHHHHCCCeEEEeCCCCCCC
Confidence 7665 2334566666667644 345642210 00 00 011346778899999999997542
Q ss_pred ChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCC
Q 010547 373 VPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEA 450 (507)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~ 450 (507)
+.... +...++ .....++|++++++++|.|||+++|+ +++|+|++||.||||++|.++
T Consensus 330 ~~~~~--------------------~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~ 389 (421)
T 2bb0_A 330 SPTEN--------------------IQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPN 389 (421)
T ss_dssp BCCCC--------------------HHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSS
T ss_pred CcccC--------------------HHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcc
Confidence 11110 222222 23467899999999999999999999 668999999999999999875
Q ss_pred ceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEec-Cccc
Q 010547 451 EFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE-GNHA 496 (507)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~-g~~~ 496 (507)
...+.. .... .+|..||++|++||++ |+++
T Consensus 390 ~~~~~~----~~~~------------~~v~~t~v~G~~v~~~~g~~~ 420 (421)
T 2bb0_A 390 YMYIPY----HYGV------------NHVHQVMKNGTIVVNREGAIL 420 (421)
T ss_dssp TTHHHH----SCSS------------CCEEEEEETTEEEEEC-----
T ss_pred cccCHh----HcCC------------CceEEEEECCEEEEeCCcccc
Confidence 322110 0011 2699999999999975 7665
No 44
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=100.00 E-value=4.9e-32 Score=283.39 Aligned_cols=332 Identities=20% Similarity=0.185 Sum_probs=225.0
Q ss_pred CCcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG 117 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~ 117 (507)
..+.+++|+|++|+|+.. +..++|+|+||||++|++..... .+.++||++|++|+|||||+|+|+..+.. .
T Consensus 32 ~~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~~---~~~~vID~~G~~v~PG~ID~H~Hl~~~~~----~ 104 (608)
T 3nqb_A 32 DQRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRR---DAAQVIDAGGAYVSPGLIDTHMHIESSMI----T 104 (608)
T ss_dssp SSCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSCC---CEEEEEECTTSEEEECEEEEEECGGGGTS----C
T ss_pred CCCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEecCeEecccCcccccC----C
Confidence 456789999999999863 66899999999999999865222 36789999999999999999999975332 3
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEec-cccCC--------CcccHHHHHHHHH-
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-GLVPE--------NAYNASALEALLN- 187 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~- 187 (507)
.....+.++++||||+++.+ ++.+.....+.+....+.... ...++.... +..+. .....++++++.+
T Consensus 105 ~~~~~~~al~~GvTtvv~~p-~~~~~v~g~~~~~~~l~~a~~-~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~ 182 (608)
T 3nqb_A 105 PAAYAAAVVARGVTTIVWDP-HEFGNVHGVDGVRWAAKAIEN-LPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSW 182 (608)
T ss_dssp HHHHHHHHHTTTEEEEEECC-HHHHHHHTHHHHHHHHHHHTT-CSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTS
T ss_pred HHHHHHHHHhCCeEEEEcCC-ccccccCCHHHHHHHHHHhhh-cCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhc
Confidence 55667889999999999876 333444445566665555543 234444433 22221 1124567777775
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (507)
.++.+++.++.+.+ ....++.+.+.++.|++++.++.+|+..... .
T Consensus 183 ~~v~glgE~~~~~~----v~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~------------------------------~ 228 (608)
T 3nqb_A 183 PEIGGIAEIMNMRG----VIERDPRMSGIVQAGLAAEKLVCGHARGLKN------------------------------A 228 (608)
T ss_dssp TTEEEEEEECCHHH----HHTTCHHHHHHHHHHHHHTCEEEECCTTCCH------------------------------H
T ss_pred cCcceeeEeeccCC----cCCCcHHHHHHHHHHHHcCCEEEEcCCCCCH------------------------------H
Confidence 58888887764321 1246688999999999999999999964321 1
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
.+... .+. |... .|+... ..+.++. .+.|..+... .. ..
T Consensus 229 ~L~~~----~~a-------Gv~~--~H~~~~--~eea~e~-l~~G~~i~i~-gs------------------------~~ 267 (608)
T 3nqb_A 229 DLNAF----MAA-------GVSS--DHELVS--GEDLMAK-LRAGLTIELR-GS------------------------HD 267 (608)
T ss_dssp HHHHH----HHT-------TCCE--ECCCCS--HHHHHHH-HHTTCEEEEE-SS------------------------SG
T ss_pred HHHHH----HHc-------CCCe--eeccCC--HHHHHHH-HHCCCEEEEe-cc------------------------cc
Confidence 11222 211 4333 676653 2333333 3567655432 10 11
Q ss_pred hhHHHHHHHHh----cCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhch
Q 010547 348 ANKEKLWEALM----DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERP 423 (507)
Q Consensus 348 ~~~~~~~~~l~----~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~ 423 (507)
.....+.+.+. .|..++++||+.+..... .. ..+...++.+.+.|++++++++++|.||
T Consensus 268 ~~~~~l~~~i~~~~~~g~~v~lgTD~~~p~~~~---~~--------------g~l~~~v~~~~~~Gls~~eal~~aT~n~ 330 (608)
T 3nqb_A 268 HLLPEFVAALNTLGHLPQTVTLCTDDVFPDDLL---QG--------------GGLDDVVRRLVRYGLKPEWALRAATLNA 330 (608)
T ss_dssp GGHHHHHHHHHHHTSCCTTEEEECBSCCHHHHH---HT--------------CSHHHHHHHHHHTTCCHHHHHHHHTHHH
T ss_pred ccHHHHHHHHHhHhhcCceEEEecCCCCCcchh---hh--------------cchHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 22233334443 689999999964321110 00 0144445555667999999999999999
Q ss_pred hHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecCcccC
Q 010547 424 AKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 424 A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~~~~ 497 (507)
|++||++++|+|++|+.||||++|.-. +. .|..||++|++|+++|+++.
T Consensus 331 A~~lgl~~~G~i~~G~~ADlvv~d~l~-------------~~------------~v~~v~~~G~~v~~~g~~~~ 379 (608)
T 3nqb_A 331 AQRLGRSDLGLIAAGRRADIVVFEDLN-------------GF------------SARHVLASGRAVAEGGRMLV 379 (608)
T ss_dssp HHHHTCTTSSCCSTTSBCCEEEESCTT-------------TC------------CEEEEEETTEEEEETTEECS
T ss_pred HHHcCCCCCcCcCCCCCccEEEECCCC-------------CC------------cceEEEECCEEEEECCeEec
Confidence 999999778999999999999999411 11 68999999999999999873
No 45
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=9.3e-33 Score=283.25 Aligned_cols=378 Identities=16% Similarity=0.124 Sum_probs=214.9
Q ss_pred CCcceEEEEecEEECCCC-----ceeeeEEEeC-CEEEEeecCCCCC-----CCCCCCcEEec-CCCEEecceeeccccc
Q 010547 40 LPYNQYWLTSKRIVTPKG-----VISGAVEIKE-GNIISIVSEEDWP-----RNSKTGQVVDY-GEAVIMPGLIDVHAHL 107 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~-----~~~~~I~I~d-G~I~~Vg~~~~~~-----~~~~~~~viD~-~g~~v~PGfID~H~H~ 107 (507)
.++.+++|+|..|.++.. +.+++|+|+| |||++|++..+.+ ...++.++||+ +|++|+|||||+|+|+
T Consensus 28 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~ 107 (476)
T 4aql_A 28 MPPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHA 107 (476)
T ss_dssp ---CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEG
T ss_pred CCCccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccch
Confidence 456789999999987643 3589999998 9999999874321 11125689995 5899999999999998
Q ss_pred CCCCCCC---------C--------------C-----ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh-
Q 010547 108 DDPGRTE---------W--------------E-----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE- 158 (507)
Q Consensus 108 ~~~~~~~---------~--------------~-----~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~- 158 (507)
....... | + .+.....+++++||||+.++. . ...+......++..
T Consensus 108 ~~~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~-~-----~~~~~~~~~~~a~~~ 181 (476)
T 4aql_A 108 SQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFA-T-----IHTDSSLLLADITDK 181 (476)
T ss_dssp GGGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-C-----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEec-c-----cCchHHHHHHHHHHH
Confidence 5321110 0 0 111223578999999999774 1 11333222333332
Q ss_pred --cCceeeEEEecccc--CC----CcccH----HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCc
Q 010547 159 --KRIYVDVGFWGGLV--PE----NAYNA----SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 159 --~~~~~~~~~~~~~~--~~----~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
.+..+......... +. ..... +.++++...+...++..+.+ ...+.++++.++++.+.|++++.+
T Consensus 182 ~G~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p---~~~~~~s~e~l~~~~~~A~~~g~~ 258 (476)
T 4aql_A 182 FGQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTP---RFSLSCSETLMGELGNIAKTRDLH 258 (476)
T ss_dssp HTCEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEE---CCTTTSCHHHHHHHHHHHHHTTCC
T ss_pred hCCEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeC---CcCCcCCHHHHHHHHHHHHHcCCc
Confidence 22221111111000 00 01112 23334433222234443333 344567999999999999999999
Q ss_pred EEEecCCccc-chhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHH
Q 010547 227 LLVHAEMEKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLL 305 (507)
Q Consensus 227 v~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i 305 (507)
+.+|+.+... +....... +. .....+...+.+ ..+.+..+.|+... ..+.+
T Consensus 259 v~~H~~e~~~e~~~~~~~~----------------~~------~~~~~~~~~~~g----~l~~~~~~~H~~~l--~~~~~ 310 (476)
T 4aql_A 259 IQSHISENRDEVEAVKNLY----------------PS------YKNYTSVYDKNN----LLTNKTVMAHGCYL--SAEEL 310 (476)
T ss_dssp EEEEESCSHHHHHHHHHHC----------------TT------SSSHHHHHHTTT----CCSTTEEEEECTTC--CHHHH
T ss_pred eEEEecCCHHHHHHHHHHh----------------CC------CCCHHHHHHHcC----CCCCCEEEEeCCCC--CHHHH
Confidence 9999854321 11111000 00 001122222221 11456778888763 33456
Q ss_pred HHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCcc
Q 010547 306 MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFL 385 (507)
Q Consensus 306 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~ 385 (507)
+.+++.|+.+. +||..-... + ....++.++++.|+.+++|||..+.....
T Consensus 311 ~~l~~~g~~v~--~~P~sn~~l-------~------------~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~--------- 360 (476)
T 4aql_A 311 NVFHERGASIA--HCPNSNLSL-------S------------SGFLNVLEVLKHEVKIGLGTDVAGGYSYS--------- 360 (476)
T ss_dssp HHHHHHTCEEE--ECHHHHHHT-------T------------CCCCCHHHHHHTTCEEEECCCTTTSSCCC---------
T ss_pred HHHHHcCCEEE--ECchhhhhh-------C------------cchHHHHHHHHCCCcEEEeCCCCCCCCCC---------
Confidence 66666776544 466321110 0 00113457788999999999976432111
Q ss_pred ccCCCCchhhh-HHHHHHHHH------HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCC
Q 010547 386 KAWGGISSLQF-VLPVTWSYG------RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDND 457 (507)
Q Consensus 386 ~~~~~~~~~~~-~l~~~~~~~------~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~ 457 (507)
.++. .....+... ...+++++++++++|.|||++||+ +++|+|++||.||||++|.+.+.. +..
T Consensus 361 -------~~~~~~~a~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~-p~~ 432 (476)
T 4aql_A 361 -------MLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDS-PID 432 (476)
T ss_dssp -------HHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCTTC-SCC
T ss_pred -------HHHHHHHHHHHHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEcCCCCCC-ccc
Confidence 0111 011111111 124799999999999999999999 568999999999999999885321 000
Q ss_pred CC----cccCCCCCccccCcEEee---EEEEEEECCEEEEecCc
Q 010547 458 HP----VHMKHPSISAYLGRRLSG---KVLATISRGNLVYKEGN 494 (507)
Q Consensus 458 ~~----~~~~~~~~~~~~~~~~~~---~V~~v~v~G~~v~~~g~ 494 (507)
. +..... .+|+.++...+ .|..|||+|++||+.+.
T Consensus 433 -~~~~~~~~~~~-~~~~~~~v~~~~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 433 -LFYGDFFGDIS-EAVIQKFLYLGDDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp -CCTHHHHSSST-THHHHHHHHHCCGGGEEEEEETTEEEECCC-
T ss_pred -cccccccCCch-hcHHHHHhhcCCCCCccEEEECCEEEecCCC
Confidence 0 000112 44555554443 49999999999998643
No 46
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=8e-34 Score=291.66 Aligned_cols=374 Identities=15% Similarity=0.050 Sum_probs=217.7
Q ss_pred cceEEEEecEEECCCC---------------ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccc
Q 010547 42 YNQYWLTSKRIVTPKG---------------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~---------------~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H 106 (507)
+..++|++|+|+++.+ +.+++|+|+||||++||+..+.+..+.++++||++|++|+|||||+|+|
T Consensus 2 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H 81 (475)
T 2ood_A 2 SLTTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIH 81 (475)
T ss_dssp -CCEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEE
T ss_pred CccceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCccc
Confidence 4556788999998644 3478999999999999975432100125689999999999999999999
Q ss_pred cCCCC------CC--C---------------CCCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc
Q 010547 107 LDDPG------RT--E---------------WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK 159 (507)
Q Consensus 107 ~~~~~------~~--~---------------~~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~ 159 (507)
+.... .. . .+.+ ....+.++++||||+++++ .. ..+.+....+.+..
T Consensus 82 l~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~ 155 (475)
T 2ood_A 82 LPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFT-SS-----SPVATEELFEEASR 155 (475)
T ss_dssp GGGTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----SHHHHHHHHHHHHH
T ss_pred HHhHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEec-cc-----CchhHHHHHHHHHH
Confidence 85321 10 0 1112 2235688999999999874 22 22333333333332
Q ss_pred C-ceeeE--EEeccccC----CC-cccHHHHHHHHH----cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc-CCc
Q 010547 160 R-IYVDV--GFWGGLVP----EN-AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRP 226 (507)
Q Consensus 160 ~-~~~~~--~~~~~~~~----~~-~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~ 226 (507)
. ..+.. .......+ .. .+..+...++.+ .+.. +..+.+ ...+..+++.+.++++.|+++ +.+
T Consensus 156 ~g~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~e~l~~~~~~a~~~~g~~ 230 (475)
T 2ood_A 156 RNMRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRN--LYAITP---RFAFGASPELLKACQRLKHEHPDCW 230 (475)
T ss_dssp HTCCEEECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTE--EEEEEE---CBGGGCCHHHHHHHHHHHHHCTTSE
T ss_pred cCCeEEEEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCce--EEEEec---cccCcCCHHHHHHHHHHHHhCCCCc
Confidence 1 11111 11110001 00 011222333332 3333 332222 223467889999999999999 999
Q ss_pred EEEecCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHH
Q 010547 227 LLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLL 305 (507)
Q Consensus 227 v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i 305 (507)
+.+|+.+.. .+.......+ . ....++++.+.+ ..+.+..+.|+... ..+.+
T Consensus 231 v~~H~~e~~~~~~~~~~~~g-------------~---------~~~~~~~~~~~g----~~~~~~~i~H~~~~--~~~~i 282 (475)
T 2ood_A 231 VNTHISENPAECSGVLVEHP-------------D---------CQDYLGVYEKFD----LVGPKFSGGHGVYL--SNNEF 282 (475)
T ss_dssp EEEECSCCHHHHHHHHHHCT-------------T---------CSSHHHHHHTTT----CCSTTEEEECCTTC--CHHHH
T ss_pred EEEeeCCChHHHHHHHHHcC-------------C---------CccHHHHHHHcC----CCCCCcEEEEeecC--CHHHH
Confidence 999996432 1111111000 0 001223333321 11455677888763 23556
Q ss_pred HHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCe--eEEeCCCCCCChhhhccccCC
Q 010547 306 MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSSDHSPTVPELKLLDEGN 383 (507)
Q Consensus 306 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~--~~lgtD~~~~~~~~~~~~~~~ 383 (507)
+.+++.|+.+ .+||+.... + + ... .++.+++++|++ +++|||+.+..... +
T Consensus 283 ~~~~~~g~~~--~~~P~~~~~----l---~---~~~---------~~~~~~~~~Gv~~~~~lgTD~~~~~~~~-~----- 335 (475)
T 2ood_A 283 RRMSKKGAAV--VFCPCSNLF----L---G---SGL---------FRLGRATDPEHRVKMSFGTDVGGGNRFS-M----- 335 (475)
T ss_dssp HHHHHHTCEE--EECHHHHHH----T---T---CCC---------CCHHHHTCTTSCCEEEECCCBTTBSCCC-H-----
T ss_pred HHHHHcCCEE--EEChhhhhh----c---c---cCc---------CCHHHHHhCCCCCcEEEEccCCCCCCcC-H-----
Confidence 7777777644 446753210 0 0 011 134577889999 99999986522110 0
Q ss_pred ccccCCCCchhhhHHHHHHHH---------------------HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCC
Q 010547 384 FLKAWGGISSLQFVLPVTWSY---------------------GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHA 441 (507)
Q Consensus 384 ~~~~~~~~~~~~~~l~~~~~~---------------------~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~A 441 (507)
+.. +...... ..+.++|++++++++|.|||++||+ +++|+|++||.|
T Consensus 336 ----------~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~A 404 (475)
T 2ood_A 336 ----------ISV-LDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEA 404 (475)
T ss_dssp ----------HHH-HHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred ----------HHH-HHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcc
Confidence 000 1111000 1236899999999999999999999 568999999999
Q ss_pred cEEEEcCCCceEeCCCCCcc------c----CCCCCccccCcEE---eeEEEEEEECCEEEEecCc
Q 010547 442 DLVVWEPEAEFELDNDHPVH------M----KHPSISAYLGRRL---SGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 442 Dlvvld~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~---~~~V~~v~v~G~~v~~~g~ 494 (507)
||||+|.+..+..+.. ... + +.. ++||.++.+ .+.|..|||+|++||++.+
T Consensus 405 Dlvvld~~~~~~~~~~-~~~~~~~~~s~~~~~~~-~~p~~~~~~~~~~~~V~~t~v~G~~v~~~~~ 468 (475)
T 2ood_A 405 DFVALDPNGGQLAQPW-HQSLIADGAGPRTVDEA-ASMLFAVMMVGDDRCVDETWVMGKRLYKKSE 468 (475)
T ss_dssp CEEEECTTCSSTTHHH-HHTTC--CCSCCSHHHH-HHHHHHHHHHCCGGGEEEEEETTEEEEECC-
T ss_pred CEEEEeCCCccccccc-cccccccccccccccch-hhHHHHHHhhCCCCCeeEEEECCEEEEECCC
Confidence 9999998864422110 000 0 012 456666655 3679999999999998754
No 47
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=9.2e-34 Score=285.76 Aligned_cols=351 Identities=17% Similarity=0.138 Sum_probs=198.8
Q ss_pred EEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC---------
Q 010547 45 YWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------- 113 (507)
Q Consensus 45 ~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~--------- 113 (507)
++|+|++|+|+++ ..+++|+|+||||++|++.. + +.+ ||++|++|+|||||+|+|+......
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~--~----~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 73 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE--V----KVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFE 73 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS--C----CCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC--C----cce-ecCCCcEEeecccchhhccchhhhccccCCCCHH
Confidence 4799999999765 56899999999999999764 2 457 9999999999999999999753211
Q ss_pred --------------CCCChhH----HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC
Q 010547 114 --------------EWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN 175 (507)
Q Consensus 114 --------------~~~~~~~----~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (507)
+.+.+.. ....++++||||+++++ . ..+.+.+..+....+....... .......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~~~~~~g~r~~~~~~~-~~~~~~~ 145 (406)
T 1p1m_A 74 EWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMY-F------HEEWIAKAVRDFGMRALLTRGL-VDSNGDD 145 (406)
T ss_dssp HHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEE-S------SHHHHHHHHHHHCCEEEEEEEE-CCBTTBC
T ss_pred HHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-h------CHHHHHHHHHHcCCEEEEEccc-ccCCCCH
Confidence 1111222 22567899999999875 1 1222222222221111111111 1111111
Q ss_pred cccHHHHHHHHH--cCC-cEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCc-ccchhhhhcccCcCCcc
Q 010547 176 AYNASALEALLN--AGV-LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTR 251 (507)
Q Consensus 176 ~~~~~~~~~~~~--~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~-~~~~~~~~~~~~~~~~~ 251 (507)
....+...+..+ .+. ..++..+.+ ......+++.+.++++.|+++|.++.+|+... ..+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~--------- 213 (406)
T 1p1m_A 146 GGRLEENLKLYNEWNGFEGRIFVGFGP---HSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLED--------- 213 (406)
T ss_dssp TTHHHHHHHHHHHHTTGGGTEEEEEEE---CCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHH---------
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEEec---CccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHH---------
Confidence 222222222222 121 123332222 22234688999999999999999999999532 22110000
Q ss_pred ccccccCCCChhHHHHHHHHHHHH-HHhhccCCCCCCce-EEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccccc
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTV-AKDTRTDGPAEGAH-LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE 329 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l-~~~~~~~~~~~g~~-~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~ 329 (507)
.+.. .++. |.. ..+.|+... . .++.+
T Consensus 214 --------------------~~~~g~~~~-------g~~~~~~~H~~~~-~------------------------~~~~~ 241 (406)
T 1p1m_A 214 --------------------ILNIGLKEV-------KTIAAHCVHLPER-Y------------------------FGVLK 241 (406)
T ss_dssp --------------------HHTTTTTTS-------CEEEEECTTCCGG-G------------------------TTTTT
T ss_pred --------------------hhhCCHhHc-------CcceeEeeeccCc-c------------------------cCCHH
Confidence 0000 0100 211 223333300 0 22222
Q ss_pred CCCCCCCceeEcCC--CCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-
Q 010547 330 EIPDGDTRFKCAPP--IRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR- 406 (507)
Q Consensus 330 ~~~~~~~~~~~~p~--~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 406 (507)
.+.... ..+|. ++.......+++++++|+++++|||+.+.....++. .+..+...+....
T Consensus 242 ~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 304 (406)
T 1p1m_A 242 DIPFFV---SHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAASNNSLNLF--------------FEMRLASLLQKAQN 304 (406)
T ss_dssp TSSEEE---EECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCTTTTSCCCHH--------------HHHHHHHHHHHTTC
T ss_pred HHHHHH---HhCcHHHhhcCCCcCcHHHHHhCCCeEEEECCCCcCCCCCCHH--------------HHHHHHHHHhcccC
Confidence 111100 11110 000011224577889999999999987653211110 0111222222222
Q ss_pred hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEE---eeEEEEEE
Q 010547 407 KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL---SGKVLATI 483 (507)
Q Consensus 407 ~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~V~~v~ 483 (507)
..++|++++++++|.|||+++|+++ |+|++||.||||++|.+..+..+. .+++.++.. .++|..||
T Consensus 305 ~~~ls~~~al~~~T~~~A~~lgl~~-G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~~~~~~~~~~v~~v~ 373 (406)
T 1p1m_A 305 PRNLDVNTCLKMVTYDGAQAMGFKS-GKIEEGWNADLVVIDLDLPEMFPV----------QNIKNHLVHAFSGEVFATMV 373 (406)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHTCSC-SSCCTTSBCCEEEEECCSGGGCSG----------GGHHHHHHHTCCSCCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCC-cccCCCCcccEEEEeCCccccCCc----------cChHHHheEecCCCCceEEE
Confidence 4589999999999999999999966 999999999999999886543321 122221111 35799999
Q ss_pred ECCEEEEecCcccCCCCCcc
Q 010547 484 SRGNLVYKEGNHAPAACGSP 503 (507)
Q Consensus 484 v~G~~v~~~g~~~~~~~~~~ 503 (507)
++|++|| +|+++..+..+.
T Consensus 374 v~G~~v~-~g~~~~~d~~~~ 392 (406)
T 1p1m_A 374 AGKWIYF-DGEYPTIDSEEV 392 (406)
T ss_dssp TTEEEEE-TTBCTTSCHHHH
T ss_pred ECCEEEE-CCeeCCCCHHHH
Confidence 9999999 999987765543
No 48
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=2.5e-32 Score=276.31 Aligned_cols=351 Identities=16% Similarity=0.129 Sum_probs=212.7
Q ss_pred CCcceEEEEecEEECCCC--c-eeeeEEEeCCEEEEeecCCCCCCCCCCC--cEEecCCCEEecceeecccccCCCCC-C
Q 010547 40 LPYNQYWLTSKRIVTPKG--V-ISGAVEIKEGNIISIVSEEDWPRNSKTG--QVVDYGEAVIMPGLIDVHAHLDDPGR-T 113 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~--~-~~~~I~I~dG~I~~Vg~~~~~~~~~~~~--~viD~~g~~v~PGfID~H~H~~~~~~-~ 113 (507)
.+.++++|+|++|+++++ + .+++|+|+||||++|++.. .+ .+. ++||++|++|+|||||+|+|+..... .
T Consensus 4 ~~~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~---~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~ 79 (418)
T 2qs8_A 4 DVDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-IS---SNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSK 79 (418)
T ss_dssp ---CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CC---CTTSSEEEEEEEEEEEECEEEEEECTTCCCCCT
T ss_pred CCCccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CC---CCCcceEEECCCCEECCCeeeeeeccccCCCCC
Confidence 455678999999999876 3 4689999999999999864 22 256 89999999999999999999976532 1
Q ss_pred CCC----Ch-------hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEe-------ccccC-C
Q 010547 114 EWE----GF-------PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW-------GGLVP-E 174 (507)
Q Consensus 114 ~~~----~~-------~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~ 174 (507)
.|+ .. ...++.++++||||+++++ ...+ ....+....+... .....+... ++... .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g~-~~~~r~~~~~~~~~~~g~~~~~~ 154 (418)
T 2qs8_A 80 AQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVG-DSGL---VAISLRDAINSGK-LAGPRIFAAGKTIATTGGHADPT 154 (418)
T ss_dssp TTSCSCCCHHHHHHHHHHHHHHHHHTTEEEEEECC-CSSS---HHHHHHHHHHTTS-SCCCEEEECCSCBEETTCTTCTT
T ss_pred chhhhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCC-CCcc---ccHHHHHHHHCCC-CCCCeEEecCccccccCCCcccc
Confidence 111 11 1156788999999999885 2111 1112222222111 011111111 11100 0
Q ss_pred ----------------CcccHH----HHHHHHHcCCcEEEEcccCC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEE
Q 010547 175 ----------------NAYNAS----ALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLV 229 (507)
Q Consensus 175 ----------------~~~~~~----~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 229 (507)
.....+ .+++..+.|...+|.+.... ...+.+..++++++++++.|+++|.++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~ 234 (418)
T 2qs8_A 155 NGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAV 234 (418)
T ss_dssp TTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 011122 33334456777888875321 11234568999999999999999999999
Q ss_pred ecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHH
Q 010547 230 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 309 (507)
Q Consensus 230 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~ 309 (507)
|+.... .+...++. |. ..+.|+... ..+.++.++
T Consensus 235 H~~~~~--------------------------------~i~~~~~~-----------g~-~~i~H~~~~--~~~~i~~l~ 268 (418)
T 2qs8_A 235 HAHGAE--------------------------------GMKRAIKA-----------GV-DSIEHGTFM--DLEAMDLMI 268 (418)
T ss_dssp EECSHH--------------------------------HHHHHHHH-----------TC-SEEEECTTC--CHHHHHHHH
T ss_pred EECCHH--------------------------------HHHHHHHc-----------CC-CEEEECCCC--CHHHHHHHH
Confidence 995321 12333322 21 235666542 234566666
Q ss_pred hCCCCEEEecccccccccccCCCCCCCceeEcCCCCC-h-------hhHHHHHHHHhcCCeeEEeCCCCCCChhhhcccc
Q 010547 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD-A-------ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDE 381 (507)
Q Consensus 310 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~-------~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~ 381 (507)
+.|+.+ ||....+.. +...+ .....|+... . .....+.++++.|+++++|||+.. .....
T Consensus 269 ~~gv~v----~p~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~-~~~~~---- 336 (418)
T 2qs8_A 269 ENGTYY----VPTISAGEF--VAEKS-KIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGV-QKHGT---- 336 (418)
T ss_dssp HHTCEE----ECCHHHHHH--HHHHT-TSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTT-BCTTC----
T ss_pred HCCCEE----eeeechHHH--hhhhc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCc-CCcch----
Confidence 667542 343211100 00000 0011122211 1 123557888889999999999743 11100
Q ss_pred CCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCc
Q 010547 382 GNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPV 460 (507)
Q Consensus 382 ~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~ 460 (507)
+...+....+.++|++++++++|.|||+++|+ +++|+|++||.||||++|.|+..++
T Consensus 337 ----------------~~~e~~~~~~~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~------ 394 (418)
T 2qs8_A 337 ----------------NWKEFVYMVENGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIEDI------ 394 (418)
T ss_dssp ----------------TTHHHHHHHHTTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCG------
T ss_pred ----------------HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhhCH------
Confidence 00112233456999999999999999999999 6689999999999999998753321
Q ss_pred ccCCCCCccccCcEEeeEEEEEEECCEEEEec
Q 010547 461 HMKHPSISAYLGRRLSGKVLATISRGNLVYKE 492 (507)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~ 492 (507)
.....|..||++|+++...
T Consensus 395 -------------~~~~~i~~v~~~G~~~~~~ 413 (418)
T 2qs8_A 395 -------------SVLENVDVVIKDGLLYEGH 413 (418)
T ss_dssp -------------GGGGGEEEEEETTEEEECC
T ss_pred -------------HHhcCccEEEECCEEEecc
Confidence 1113699999999998754
No 49
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=1e-32 Score=279.02 Aligned_cols=347 Identities=18% Similarity=0.166 Sum_probs=202.9
Q ss_pred ceEEEEecEEECCCC-------ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC--
Q 010547 43 NQYWLTSKRIVTPKG-------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-- 113 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~-------~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~-- 113 (507)
++++|+|++|+|+++ +.+++|+|+||||++||+..+.+.. .+.++||++|++|+|||||+|+|+......
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~ 83 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGP-YPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAE 83 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC---CCTTSEECTTCEEEECEEEEEECCCCCSCCHH
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhcccc-CCCeEEeCCCCEECCcccccccCcchhhhhHH
Confidence 468999999999765 2478999999999999986543321 145799999999999999999999765431
Q ss_pred -------------------------------CCCChh----HHHHHHHhCCceEEEeCCCCCCCCC-CCHHHHHHHHHHH
Q 010547 114 -------------------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPST-ISTETLKLKVDAA 157 (507)
Q Consensus 114 -------------------------------~~~~~~----~~~~~~l~~GvTt~~~~~~~~~p~~-~~~~~~~~~~~~~ 157 (507)
+.+.+. ...+.++++||||+.++. ...... .....+....+..
T Consensus 84 ~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2q09_A 84 EFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKS-GYGLTLEDELKMLRVARRLG 162 (416)
T ss_dssp HHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEEC-CSCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEecc-CcccChHhHHHHHHHHHHHH
Confidence 011111 123678899999999864 111110 0011222222211
Q ss_pred h-cCceeeEEEeccc-cCCC--cccHHHH--------HHHHHcC-CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 010547 158 E-KRIYVDVGFWGGL-VPEN--AYNASAL--------EALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224 (507)
Q Consensus 158 ~-~~~~~~~~~~~~~-~~~~--~~~~~~~--------~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 224 (507)
. ....+.....+.. .... ....+.+ ..+...+ ...++.+ .+.+..+++.+.++++.|++.|
T Consensus 163 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~a~~~g 236 (416)
T 2q09_A 163 EALPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVF------CEHIGFSLAQTEQVYLAADQYG 236 (416)
T ss_dssp HHSSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEB------BSTTSBCHHHHHHHHHHHHHTT
T ss_pred hhCCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccc------cCCCcCCHHHHHHHHHHHHHCC
Confidence 1 1222221111111 1100 0001111 1222233 2333332 2223568899999999999999
Q ss_pred CcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHH
Q 010547 225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDL 304 (507)
Q Consensus 225 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~ 304 (507)
+++.+|+..... .. .+... .+. |. ..+.|+..- ..+.
T Consensus 237 ~~v~~H~~~~~~------------------------~~-----~~~~~----~~~-------g~-~~~~H~~~~--~~~~ 273 (416)
T 2q09_A 237 LAVKGHMDQLSN------------------------LG-----GSTLA----ANF-------GA-LSVDHLEYL--DPEG 273 (416)
T ss_dssp CEEEEEESSSCC------------------------CS-----HHHHH----HHT-------TC-SEEEECTTC--CHHH
T ss_pred CcEEEEECCCCc------------------------hH-----HHHHH----HHc-------CC-CEEeecccC--CHHH
Confidence 999999853211 00 11111 111 22 235566542 2345
Q ss_pred HHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCc
Q 010547 305 LMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNF 384 (507)
Q Consensus 305 i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~ 384 (507)
++.+++.|+.+ ..||....... + ... .++.+++++|+++++|||+.+.....
T Consensus 274 ~~~~~~~g~~~--~~~p~~~~~~~------~---~~~---------~~~~~~~~~Gv~~~~gtD~~~~~~~~-------- 325 (416)
T 2q09_A 274 IQALAHRGVVA--TLLPTAFYFLK------E---TKL---------PPVVALRKAGVPMAVSSDINPGTAPI-------- 325 (416)
T ss_dssp HHHHHHHTCEE--EECHHHHHHTT------C---CCC---------CCHHHHHHTTCCEEECCCCBTTTBCC--------
T ss_pred HHHHHHcCCeE--EEcCccHHhhc------c---ccc---------cCHHHHHHCCCeEEEecCCCCccCCC--------
Confidence 66666677654 34664322110 0 001 13457788999999999976431100
Q ss_pred cccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccC
Q 010547 385 LKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMK 463 (507)
Q Consensus 385 ~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~ 463 (507)
...+..+.......++|++++++++|.|||+++|+ +++|+|++||.||||++|.++....
T Consensus 326 ----------~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~--------- 386 (416)
T 2q09_A 326 ----------VSLRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAEL--------- 386 (416)
T ss_dssp ----------CCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHH---------
T ss_pred ----------CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEECCCchhhh---------
Confidence 00022222233467899999999999999999999 5689999999999999998753321
Q ss_pred CCCCccccCcEEeeEEEEEEECCEEEEecCc
Q 010547 464 HPSISAYLGRRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 464 ~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
++.. ...+|..||++|++||+++-
T Consensus 387 -----~~~~--~~~~v~~v~v~G~~v~~~~~ 410 (416)
T 2q09_A 387 -----SYLI--GVDQLVSRVVNGEETLHGEG 410 (416)
T ss_dssp -----HHSC--SCCCEEEEEETTEECCC---
T ss_pred -----hhhh--ccCcceEEEECCEEEEeCCC
Confidence 1111 12369999999999997753
No 50
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.2e-32 Score=280.38 Aligned_cols=369 Identities=15% Similarity=0.094 Sum_probs=209.0
Q ss_pred CCcceEEEEecEEECCCC-----ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC--
Q 010547 40 LPYNQYWLTSKRIVTPKG-----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR-- 112 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~-----~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~-- 112 (507)
+.+.+++|+|++|++++. +.+++|+|+||||++|++....+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 6 ~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~--~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g 83 (439)
T 2i9u_A 6 KDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDK--YKGNPIIDFRNNIIIPGMNDLHAHASQYKNLG 83 (439)
T ss_dssp ---CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGG--GTTSCEEEEEEEEEEECEEEEEEEGGGGGGTT
T ss_pred CCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEeccccccc--CCCceEEcCCCeEEEecceecccccchHhhhC
Confidence 345778999999999872 35889999999999999643221 125689999999999999999999975311
Q ss_pred -CCC---------------------CChhH----HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeE
Q 010547 113 -TEW---------------------EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDV 165 (507)
Q Consensus 113 -~~~---------------------~~~~~----~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~ 165 (507)
... +.+.. ..+.++++||||+++++ +. ..+......+.+.. ......
T Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~~g~r~~~ 157 (439)
T 2i9u_A 84 IGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFA-TL-----HKDSTIELFNMLIKSGIGAYV 157 (439)
T ss_dssp CCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----CHHHHHHHHHHHHHHTCEEEE
T ss_pred CcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEcc-cc-----ccchHHHHHHHHHHcCCEEEE
Confidence 000 01111 23578999999999875 21 23333333333322 111111
Q ss_pred --EEeccccCC-C-c---ccHHHHHHHHH---cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc
Q 010547 166 --GFWGGLVPE-N-A---YNASALEALLN---AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK 235 (507)
Q Consensus 166 --~~~~~~~~~-~-~---~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 235 (507)
.......+. . . ...+...++.+ .+...++.++.+ ...+..+++.+.++++.|+++|.++.+|+.+..
T Consensus 158 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 234 (439)
T 2i9u_A 158 GKVNMDYNCPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITP---RFVPSCSNELMDGLGKLSYKYRLPVQSHLSENL 234 (439)
T ss_dssp ECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEE---CCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCH
T ss_pred EeeeccccCCcccchhHHHHHHHHHHHHHHHhCCCCceEEEEec---CCcCcCCHHHHHHHHHHHHhcCCcEEEeecCCh
Confidence 111100010 0 0 11222233322 222224444332 222356899999999999999999999996532
Q ss_pred c-chhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCC-ceEEEEecCChhHHHHHHHHHHhCCC
Q 010547 236 G-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG-AHLHIVHLSDASSSLDLLMEAKTNGD 313 (507)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~~~~h~~~~~~~~~~i~~~~~~g~ 313 (507)
. +....... ...|. .++...+.+. .+ .+..+.|+.+. ..+.++.+++.|+
T Consensus 235 ~~~~~~~~~~-------------~~~~~---------~~~~~~~~g~----~~~~~~~i~H~~~~--~~~~~~~l~~~g~ 286 (439)
T 2i9u_A 235 DEIAVVKSLH-------------KKSNF---------YGEVYDKFGL----FGNTPTLMAHCIHS--SKEEINLIKRNNV 286 (439)
T ss_dssp HHHHHHHHHC-------------TTCSS---------HHHHHHHTTC----SSSSCEEEEECCSC--CHHHHHHHHHTTC
T ss_pred HHHHHHHHHh-------------CCCCC---------HHHHHHHcCC----CCCCCeEEEEEecC--CHHHHHHHHHcCC
Confidence 1 11111000 00000 1112222211 13 44567777653 2245666667775
Q ss_pred CEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCch
Q 010547 314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393 (507)
Q Consensus 314 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (507)
. +.+||+.... + +. ..+ ++.+++++|+++++|||+.+... . ..
T Consensus 287 ~--~~~~p~~~~~----l---~~---~~~---------~~~~~~~~Gv~~~lgtD~~~~~~-~---------------~~ 329 (439)
T 2i9u_A 287 T--IVHCPTSNFN----L---GS---GMM---------PVRKYLNLGINVVLGSDISAGHT-C---------------SL 329 (439)
T ss_dssp E--EEECHHHHHH----T---TC---CCC---------CHHHHHHTTCEEEECCCBTTBCC-S---------------CH
T ss_pred E--EEECccchhh----c---cc---ccC---------CHHHHHHCCCcEEEecCCCCCCC-c---------------CH
Confidence 4 4456653210 0 00 111 24567889999999999865211 0 00
Q ss_pred hhh-HHHHHHHHHH-------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCC
Q 010547 394 LQF-VLPVTWSYGR-------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHP 465 (507)
Q Consensus 394 ~~~-~l~~~~~~~~-------~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~ 465 (507)
... .+...+.... ..++|++++++++|.|||++|| ++|+|++||.|||||+|.+..+..+ . ..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg--~~Gsl~~G~~ADlvvld~~~~~~~~-~------~~ 400 (439)
T 2i9u_A 330 FKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFG--KVGSFEEGYDFDALVINDSNLYPED-Y------DL 400 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTS--SCSSCSTTCBCCEEEECCTTSCGGG-S------CH
T ss_pred HHHHHHHHHHhccccccccCCCCCCCHHHHHHHHHHHHHHHhc--cCCccCCCCccCEEEEeCCCccccC-C------Cc
Confidence 110 0111111111 3689999999999999999999 6899999999999999988644320 0 11
Q ss_pred CCccccCcEEee---EEEEEEECCEEEEecCc
Q 010547 466 SISAYLGRRLSG---KVLATISRGNLVYKEGN 494 (507)
Q Consensus 466 ~~~~~~~~~~~~---~V~~v~v~G~~v~~~g~ 494 (507)
++|+.++...+ .|..||++|++||++++
T Consensus 401 -~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~ 431 (439)
T 2i9u_A 401 -TERLERFIYLGDDRNIMKRYVCGNEIFGPKF 431 (439)
T ss_dssp -HHHHHHHHHHCCGGGEEEEEETTEEEC----
T ss_pred -cCHHHHheecCCCCCeeEEEECCEEEeeCCC
Confidence 34444443322 79999999999998754
No 51
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=1.1e-31 Score=271.75 Aligned_cols=345 Identities=19% Similarity=0.157 Sum_probs=198.1
Q ss_pred CCcceEEEEecEEECCCC-------ceeeeEEEeCCEEEEeecCCCCCCCC-CCCcEEecCCCEEecceeecccccCCCC
Q 010547 40 LPYNQYWLTSKRIVTPKG-------VISGAVEIKEGNIISIVSEEDWPRNS-KTGQVVDYGEAVIMPGLIDVHAHLDDPG 111 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~-------~~~~~I~I~dG~I~~Vg~~~~~~~~~-~~~~viD~~g~~v~PGfID~H~H~~~~~ 111 (507)
.++.+++|+|++++|+++ +.+++|+|+||||++||+..+.+... ++.++||++|++|+|||||+|+|+....
T Consensus 12 ~~~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~ 91 (419)
T 2puz_A 12 TGNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGG 91 (419)
T ss_dssp ---CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSS
T ss_pred CCCCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchh
Confidence 345689999999999754 24789999999999999875433210 1358999999999999999999986543
Q ss_pred CCC---------------------------------CCCh----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHH
Q 010547 112 RTE---------------------------------WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKV 154 (507)
Q Consensus 112 ~~~---------------------------------~~~~----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~ 154 (507)
... .+.+ ......++++|||++.+.. .............+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~ 170 (419)
T 2puz_A 92 NRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKS-GYGLDIETELKMLRVA 170 (419)
T ss_dssp CCHHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEEC-CSCCSHHHHHHHHHHH
T ss_pred hhHHHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCC-CCCCCchhHHHHHHHH
Confidence 210 0001 1123677899999998753 1111000111122222
Q ss_pred HHHhcCceeeEEE-eccccCCCcc-------cH-----HHHHHHHHcC-CcEEEEcccCCCCCCCCCCCHHHHHHHHHHH
Q 010547 155 DAAEKRIYVDVGF-WGGLVPENAY-------NA-----SALEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVL 220 (507)
Q Consensus 155 ~~~~~~~~~~~~~-~~~~~~~~~~-------~~-----~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 220 (507)
+.+.....+.+.. ..+.....+. .. +.+..+...+ ....+.+ .+....+++.+.++++.|
T Consensus 171 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~a 244 (419)
T 2puz_A 171 RRLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGF------CEGIAFSVKEIDRVFAAA 244 (419)
T ss_dssp HHHTTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCSEECCE------ESTTSBCHHHHHHHHHHH
T ss_pred HHHhhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhcccccccccc------cCCCCcCHHHHHHHHHHH
Confidence 2222222222211 1111111110 01 1112222222 2222211 112346789999999999
Q ss_pred HhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH
Q 010547 221 ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS 300 (507)
Q Consensus 221 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~ 300 (507)
+++|+++.+|+..... .. .++. ..+. |. ..+.|+...
T Consensus 245 ~~~g~~v~~H~~~~~~------------------------~~-----~~~~----~~~~-------g~-~~~~H~~~~-- 281 (419)
T 2puz_A 245 QQRGLPVKLHAEQLSN------------------------LG-----GAEL----AASY-------NA-LSADHLEYL-- 281 (419)
T ss_dssp HHTTCCBEEEESSSSC------------------------CS-----HHHH----HHHT-------TC-SEEEECTTC--
T ss_pred HHCCCcEEEEeccccc------------------------CC-----HHHH----HHhc-------CC-ceehHhccC--
Confidence 9999999999853210 00 1111 1111 21 235677652
Q ss_pred HHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCC-hhhhcc
Q 010547 301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV-PELKLL 379 (507)
Q Consensus 301 ~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~-~~~~~~ 379 (507)
..+.++.+++.|+.+. ++|....... +. . ..++..++++|+++++|||+.+.. ....
T Consensus 282 ~~~~~~~~~~~g~~~~--~~p~~~~~l~------~~---~---------~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~-- 339 (419)
T 2puz_A 282 DETGAKALAKAGTVAV--LLPGAFYALR------EK---Q---------LPPVQALRDAGAEIALATDCNPGTSPLTS-- 339 (419)
T ss_dssp CHHHHHHHHHHTCEEE--ECHHHHHHHT------CC---C---------CCCHHHHHHHTCCEEECCCCCSSSCCBCC--
T ss_pred CHHHHHHHHHcCCcEE--ECCchhhhhc------cc---c---------cccHHHHHHCCCeEEEECCCCCCCCcccc--
Confidence 2345666666676543 3553211000 00 0 012356677899999999986531 1100
Q ss_pred ccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCC
Q 010547 380 DEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDND 457 (507)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~ 457 (507)
+...++ .....++|++++++++|.|||+++|+ +++|+|++||.||||+||.++...+..
T Consensus 340 ------------------l~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~~- 400 (419)
T 2puz_A 340 ------------------LLLTMNMGATLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVY- 400 (419)
T ss_dssp ------------------HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHHH-
T ss_pred ------------------HHHHHHHhccccCCCHHHHHHHHHHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcchh-
Confidence 222222 23456899999999999999999999 568999999999999999875432210
Q ss_pred CCcccCCCCCccccCcEEeeEEEEEEECCEEEE
Q 010547 458 HPVHMKHPSISAYLGRRLSGKVLATISRGNLVY 490 (507)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~ 490 (507)
.... ..|..||++|++|.
T Consensus 401 ---~~~~------------~~v~~v~v~G~~v~ 418 (419)
T 2puz_A 401 ---RIGF------------NPLHARIFKGQKVS 418 (419)
T ss_dssp ---CBSC------------CCEEEEEETTEECC
T ss_pred ---hhcC------------CceEEEEECCEEcC
Confidence 0011 26999999999874
No 52
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=3e-32 Score=275.84 Aligned_cols=376 Identities=14% Similarity=0.107 Sum_probs=207.9
Q ss_pred EEEEecEEECCCCc-eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC---CCC---
Q 010547 45 YWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---WEG--- 117 (507)
Q Consensus 45 ~~i~n~~i~~~~~~-~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~---~~~--- 117 (507)
++|+|++|++++++ .+++|+| ||+|++||+..+.+..+++.++||++|++|+|||||+|+|+....... ...
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 68999999999884 4899999 999999998654332223678999999999999999999997543321 000
Q ss_pred --------------------hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcc
Q 010547 118 --------------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY 177 (507)
Q Consensus 118 --------------------~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (507)
......+++++||||+.++. .. + .. + +.... .+... ....+.....+.
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~-~~-~--~~---~-~a~~~--~Gir~--~~~~~~~~~~~~ 148 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAIS-SY-G--ED---L-QACID--SALKV--VYFNEVIGSNAA 148 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEE-SS-S--TT---H-HHHHH--BSSEE--EEEEEECBCCGG
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEec-Cc-H--HH---H-HHHHh--cCCeE--EEeccccCCChh
Confidence 12234468899999999875 21 1 11 1 11111 12111 111111122221
Q ss_pred c-H---H----HHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCccc-chhhhhcccCcC
Q 010547 178 N-A---S----ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTL 248 (507)
Q Consensus 178 ~-~---~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~ 248 (507)
. . + .+..........++..+.+ ......+++.++++++.|++++.++.+|+.+... +.......+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~ 225 (427)
T 3v7p_A 149 TADVMYASFLERFHQSKKHENERFKAAVAI---HSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFA 225 (427)
T ss_dssp GHHHHHHHHHHHHHHHHTTCBTTEEEEEEE---CCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHH
T ss_pred hhhHHHHHHHHHHHHhhhccCCceEEEEec---CCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcch
Confidence 1 1 1 1122111111122222221 2334578999999999999999999999754332 111111000000
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
+ .....+....|... ....+.++ .+.+..+.|+... ..+.++.+++.|+. ..+||.......
T Consensus 226 ~-~~~~~~~~~~~~~~----~~~~l~~~---------~~~~~~~~H~~~~--~~~~~~~l~~~g~~--~~~~p~s~~~~~ 287 (427)
T 3v7p_A 226 K-FFKEFLNQTRPVND----TKSFLELF---------KELHTLFVHMVWA--NEEEIQTIASYNAH--IIHCPISNRLLG 287 (427)
T ss_dssp H-HHHHHTCCCSCSSC----HHHHHHTT---------TTSEEEEEECTTC--CHHHHHHHHHSEEE--EEECHHHHHHTT
T ss_pred h-hhhhhccCCCcccC----HHHHHhhh---------cCCCEEEEECCCC--CHHHHHHHHHcCCE--EEECHHHHHHhc
Confidence 0 00000000001000 11111111 1666788888763 34456677777754 444664321110
Q ss_pred cCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhH-HHHHHHHHHh
Q 010547 329 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYGRK 407 (507)
Q Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 407 (507)
...++++. + +|+.+++|||+.+++...++ ++.. ..........
T Consensus 288 ----------~~~~~~~~----------~-~Gv~v~lgtD~~~~~~~~~~---------------~~~~~~a~~~~~~~~ 331 (427)
T 3v7p_A 288 ----------NGVLDLEK----------I-KSIPYAIATDGLSSNYSLNM---------------YEELKAALFVHPNKE 331 (427)
T ss_dssp ----------CCCCCTTT----------T-TTSCEEECCCCTTSCSCCCH---------------HHHHHHHHHHSTTSC
T ss_pred ----------CCCCCHHH----------H-CCCeEEEeCCCCCCCCCCCH---------------HHHHHHHHHhccCCC
Confidence 01122322 2 79999999997544322111 1110 1111110111
Q ss_pred cCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCE
Q 010547 408 YGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGN 487 (507)
Q Consensus 408 ~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~ 487 (507)
..++++++++++|.|||+++|++ .|+|++|+.|||+++|.+.++..+. ..++......+.|..||++|+
T Consensus 332 ~~~~~~~~~~~~t~~~a~~~g~~-~g~l~~G~~Ad~~~~d~~~~~~~~~----------~~~~~~~~~~~~v~~v~v~G~ 400 (427)
T 3v7p_A 332 ATTFAKELIIRATKAGYDALGFE-GGEIAVGKDADMQLIDLPEGLTNVE----------DLYLHVILHTTKPKKVYIQGE 400 (427)
T ss_dssp HHHHHHHHHHHHTHHHHHHHTCS-CSSCCTTSBCCEEEEECCTTCCCGG----------GHHHHHHHHCSSCSEEEETTE
T ss_pred cccCHHHHHHHHHHHHHHHhCCC-CceeCCCCccCEEEEcCCCccCCCc----------cchHHHhcccCCccEEEECCE
Confidence 12567999999999999999996 8999999999999999886543221 222222222457999999999
Q ss_pred EEEecCcccCCCCC
Q 010547 488 LVYKEGNHAPAACG 501 (507)
Q Consensus 488 ~v~~~g~~~~~~~~ 501 (507)
+||++|+++....+
T Consensus 401 ~v~~~g~~~~~~~~ 414 (427)
T 3v7p_A 401 EHVREAENLYFQSH 414 (427)
T ss_dssp EEEC---CCCBC--
T ss_pred EEEECCcccCCccc
Confidence 99999999865443
No 53
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.98 E-value=1e-30 Score=262.40 Aligned_cols=338 Identities=20% Similarity=0.209 Sum_probs=208.0
Q ss_pred cceEEEEecEEECCCC-ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC-----
Q 010547 42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW----- 115 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~----- 115 (507)
+.+++|+|++|+|+++ ...++|+|+||+|++|++..+ + .+.++||++|++|+|||||+|+|++.......
T Consensus 4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~ 79 (396)
T 3ooq_A 4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-D---PDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSD 79 (396)
T ss_dssp --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-C---TTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCC
T ss_pred cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-C---CCCeEEECCCCEEecCEEecccccCccccCccccccc
Confidence 4578999999999886 445999999999999998765 2 37899999999999999999999975321100
Q ss_pred --------------C----ChhHHHHHHHhCCceEEEeCCCCCCCCC---------CCHHHHHHHHHHHhcCceeeEEEe
Q 010547 116 --------------E----GFPSGTKAAAAGGITTLIDMPLNSDPST---------ISTETLKLKVDAAEKRIYVDVGFW 168 (507)
Q Consensus 116 --------------~----~~~~~~~~~l~~GvTt~~~~~~~~~p~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 168 (507)
. ........++++||||+.+++ ++.+.. .. ..... ... .....+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-gs~~~i~G~~~~~~~~~-~~~~~---~~~-~~~~~i~~~ 153 (396)
T 3ooq_A 80 GNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVP-GSANPVGGQGSVIKFRS-IIVEE---CIV-KDPAGLKMA 153 (396)
T ss_dssp SCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECC-CSSSSEEEEEEEEESCC-SSHHH---HEE-EEEEEEEEE
T ss_pred cccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccC-CCCCcccCeeEEEeccC-CCHHH---cee-cCCcEEEEE
Confidence 0 011467889999999999986 332111 10 01111 111 111111111
Q ss_pred cccc--------CCCcc----cHHHHHHHHHcCCcEEEE---cccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 169 GGLV--------PENAY----NASALEALLNAGVLGLKS---FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 169 ~~~~--------~~~~~----~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
.+.. ...+. ..+.+++....+....+. .....+.. ...+...+.+..+.+.+.++.+|+..
T Consensus 154 ~g~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~e~l~~~~~~~~~v~iHa~~ 229 (396)
T 3ooq_A 154 FGENPKRVYGERKQTPSTRMGTAGVIRDYFTKVKNYMKKKELAQKEGKEF----TETDLKMEVGEMVLRKKIPARMHAHR 229 (396)
T ss_dssp CSHHHHHHHHHTTCSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC----CCCCHHHHHHHHHHTTSSCEEEEECS
T ss_pred cCCCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCC----CCcChhHHHHHHHHcCCCcEEEEECc
Confidence 1110 11111 112333332211100000 00000111 12233344444456889999999954
Q ss_pred cccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCC
Q 010547 234 EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313 (507)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~ 313 (507)
.. .+...++++.+. |.++.+.|+..... .++.+++.|+
T Consensus 230 ~~--------------------------------~i~~~~~~~~~~-------g~~~~i~H~~~~~~---~~~~l~~~gv 267 (396)
T 3ooq_A 230 AD--------------------------------DILTAIRIAEEF-------GFNLVIEHGTEAYK---ISKVLAEKKI 267 (396)
T ss_dssp HH--------------------------------HHHHHHHHHHHH-------TCCEEEEECTTGGG---GHHHHHHHTC
T ss_pred hh--------------------------------HHHHHHHHHHHc-------CCCEEEecCchHHH---HHHHHHHCCC
Confidence 32 234566666665 67788999987522 3667777787
Q ss_pred CEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCch
Q 010547 314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393 (507)
Q Consensus 314 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (507)
.+.. ||.........+ .......+..+++.|+.++++||+.......
T Consensus 268 ~v~~--~P~~~~~~~~~~--------------~~~~~~~~~~l~~~Gv~v~lgtD~~~~~~~~----------------- 314 (396)
T 3ooq_A 268 PVVV--GPLLTFRTKLEL--------------KDLTMETIAKLLKDGVLIALMCDHPVIPLEF----------------- 314 (396)
T ss_dssp CEEE--CCCSSCCCSGGG--------------TTCCTTHHHHHHHTTCCEEECCTTTTSCGGG-----------------
T ss_pred CEEE--CcccccccchhH--------------HhhhhHHHHHHHHCCCEEEEEcCCCccCccH-----------------
Confidence 7654 553221110000 0112235677888999999999975332211
Q ss_pred hhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccC
Q 010547 394 LQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLG 472 (507)
Q Consensus 394 ~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (507)
+......+.+.+++++++++++|.|||++||+ +++|+|++||.||||++|.++.. . .
T Consensus 315 ----l~~~~~~~~~~gl~~~~al~~~T~n~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~---------~-~-------- 372 (396)
T 3ooq_A 315 ----ATVQAATAMRYGAKEEDLLKILTVNPAKILGLEDRIGSIEPGKDADLVVWSGHPFD---------M-K-------- 372 (396)
T ss_dssp ----HHHHHHHGGGGTCCHHHHHHTTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTS---------T-T--------
T ss_pred ----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCeeeECCCCcCCEEEECCCccc---------c-c--------
Confidence 33344556678999999999999999999999 66899999999999999976321 1 1
Q ss_pred cEEeeEEEEEEECCEEEEecCc
Q 010547 473 RRLSGKVLATISRGNLVYKEGN 494 (507)
Q Consensus 473 ~~~~~~V~~v~v~G~~v~~~g~ 494 (507)
..|..||++|++||++.+
T Consensus 373 ----~~v~~v~~~G~~v~~~~~ 390 (396)
T 3ooq_A 373 ----SVVERVYIDGVEVFRREG 390 (396)
T ss_dssp ----CCEEEEEETTEEEEECC-
T ss_pred ----cceeEEEECCEEEeCCCC
Confidence 269999999999998754
No 54
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.98 E-value=9.5e-31 Score=262.78 Aligned_cols=350 Identities=18% Similarity=0.207 Sum_probs=199.7
Q ss_pred ceEEEEecEEECCCCc-eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecC-CCEEecceeecccccCCC---CCCCCCC
Q 010547 43 NQYWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG-EAVIMPGLIDVHAHLDDP---GRTEWEG 117 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~~-~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~-g~~v~PGfID~H~H~~~~---~~~~~~~ 117 (507)
.+++|+|++|+++++. .+++|+|+||||++|++..+.. .+.++||++ |++|+|||||+|+|+..+ ...+.+.
T Consensus 3 ~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~ 79 (396)
T 2vhl_A 3 ESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKE---PYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFST 79 (396)
T ss_dssp CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSS---CCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHH
T ss_pred ccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCC---CCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHH
Confidence 4689999999998874 4789999999999998421111 146899999 999999999999999764 2233445
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-C----c--eeeEEEeccccCC-----------CcccH
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-R----I--YVDVGFWGGLVPE-----------NAYNA 179 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~----~--~~~~~~~~~~~~~-----------~~~~~ 179 (507)
+...++.++++||||+++++ .+.+.......+....+.... . . ...+...+.+... .....
T Consensus 80 ~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 158 (396)
T 2vhl_A 80 LDIMSSRLPEEGTTSFLATT-ITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDV 158 (396)
T ss_dssp HHHHHHHGGGGTEEEEEEEC-CSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCH
T ss_pred HHHHHHHHHcCCeeEEEecc-cCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCH
Confidence 66678889999999999986 332221111122333333322 2 1 2222222222110 00134
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEE-ecCCcccchhhhhcccCcCCccccccccC
Q 010547 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAEMEKGSERHVKLEDDTLDTRSYSTYLK 258 (507)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (507)
+.++++.+.+...++.+... .+.+ .+.++++.++++|.++.+ |+.....
T Consensus 159 ~~~~~~~~~~~~~ik~~~~~---p~~~-----~~~~~~~~a~~~g~~v~~gH~~~~~~---------------------- 208 (396)
T 2vhl_A 159 ELFKKWQQEAGGLIKIVTLA---PEED-----QHFELIRHLKDESIIASMGHTDADSA---------------------- 208 (396)
T ss_dssp HHHHHHHHHTTTCEEEEEEC---GGGS-----GGGHHHHHHHHTTCEEEECSBCCCHH----------------------
T ss_pred HHHHHHHHhcCCcceEEEEC---CCCC-----CHHHHHHHHHHCCCEEeecccCCCHH----------------------
Confidence 55666666554334432111 0011 112566778888888877 8742210
Q ss_pred CCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHH-----HHHHHHHhCCCCEEEecccccccccccCCCC
Q 010547 259 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSL-----DLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333 (507)
Q Consensus 259 ~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~-----~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~ 333 (507)
.+.. +.+. |.+ ++.|+++..... ..+..... .-.+.++.++|++.++.+.+
T Consensus 209 ---------~~~~----a~~~-------G~~-~i~H~~~~~~~~~~~~~G~~~~~~~-~~~~~~e~~~h~~~l~~~~~-- 264 (396)
T 2vhl_A 209 ---------LLSD----AAKA-------GAS-HMTHLYNAMSPFHHREPGVIGTALA-HDGFVTELIADGIHSHPLAA-- 264 (396)
T ss_dssp ---------HHHH----HHHT-------TCC-EESSTTSSBCCCCSSSCHHHHHHHH-CTTCEEEEECSSSSSCHHHH--
T ss_pred ---------HHHH----HHHc-------CCC-EeEeCCccCcccccCCCCchhhhhc-CCCcEEEEcCCccccCHHHH--
Confidence 1111 1122 444 667765320000 00000000 01234444555554432211
Q ss_pred CCCceeEcCCCCChhhHHHHHHHHhcCC-eeEEeCCCCCCC--hh--------hhccccCCccccCCCCchhhhHHHHHH
Q 010547 334 GDTRFKCAPPIRDAANKEKLWEALMDGH-IDMLSSDHSPTV--PE--------LKLLDEGNFLKAWGGISSLQFVLPVTW 402 (507)
Q Consensus 334 ~~~~~~~~p~~~~~~~~~~~~~~l~~G~-~~~lgtD~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~ 402 (507)
..+.+. .|. .+.+.+|..... .. ......|.+....++..+.+..+...+
T Consensus 265 -----------------~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~d~~~~g~~~~l~~~l 325 (396)
T 2vhl_A 265 -----------------KLAFLA--KGSSKLILITDSMRAKGLKDGVYEFGGQSVTVRGRTALLSDGTLAGSILKMNEGA 325 (396)
T ss_dssp -----------------HHHHHH--HCTTSEEEECCBCTTTTSCSEEEEETTEEEEEETTEEECTTSCBCSBCCCHHHHH
T ss_pred -----------------HHHHhh--cCCccEEEECcChhhcCCCCceEEECCeEEEEECCEEEeCCCcccccccCHHHHH
Confidence 111111 133 344444432100 00 001122222222234555555566666
Q ss_pred HHHHh-cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEE
Q 010547 403 SYGRK-YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVL 480 (507)
Q Consensus 403 ~~~~~-~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 480 (507)
+.+.+ .++|++++++++|.|||++||+ +++|+|++|++|||+++|.+. .|.
T Consensus 326 ~~~~~~~~~~~~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~---------------------------~v~ 378 (396)
T 2vhl_A 326 RHMREFTNCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSDC---------------------------EVI 378 (396)
T ss_dssp HHHHHHHCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTTC---------------------------CEE
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECCCC---------------------------cEE
Confidence 65544 6899999999999999999999 568999999999999999762 689
Q ss_pred EEEECCEEEEecCccc
Q 010547 481 ATISRGNLVYKEGNHA 496 (507)
Q Consensus 481 ~v~v~G~~v~~~g~~~ 496 (507)
.||++|++||+++++-
T Consensus 379 ~v~~~G~~v~~~~~~~ 394 (396)
T 2vhl_A 379 LTICRGNIAFISKEAD 394 (396)
T ss_dssp EEEETTEEEEECSCCC
T ss_pred EEEECCEEEEeccccc
Confidence 9999999999998874
No 55
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.97 E-value=3.3e-30 Score=252.37 Aligned_cols=344 Identities=18% Similarity=0.158 Sum_probs=205.4
Q ss_pred EEEEecEEECCCCce-eeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC----CCCCCChh
Q 010547 45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG----RTEWEGFP 119 (507)
Q Consensus 45 ~~i~n~~i~~~~~~~-~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~----~~~~~~~~ 119 (507)
++|+|++|+++++.. +++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+. ..+.+++.
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~---~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~ 81 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLP---SEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETID 81 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCC---CCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHH
Confidence 699999999998854 679999999999999865433 2678999999999999999999987542 12445678
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcc
Q 010547 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFM 197 (507)
Q Consensus 120 ~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 197 (507)
...+.++++|||+++..+ .+.|.......+....+..+. .....++..+++.... +.|+...
T Consensus 82 ~~~~a~~~~GvTt~l~t~-~T~~~e~l~~al~~~~~~~~~~~~~ilGiHlEGPfis~~-----------~~Ga~~~---- 145 (381)
T 3iv8_A 82 TMHKANLKSGCTSFLPTL-ITSSDENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVM-----------KKGIHSV---- 145 (381)
T ss_dssp HHHHHHHHTTEEEEEEEE-ESCCHHHHHHHHHHHHHHHHHCSSSBCCEEEECSSCCGG-----------GCTTSCT----
T ss_pred HHHHHHHhCCcccccccc-CCCCHHHHHHHHHHHHHHHhcCCCceeEeeccCcccCHh-----------hcCCCCH----
Confidence 888999999999999876 444432223333333333222 2234445544443321 1222111
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHH
Q 010547 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 277 (507)
.....++.++++++.+.+. .+++.+.+. +... .++++.+.
T Consensus 146 -----~~i~~p~~~~~~~~~~~~~--~i~~vTlAP-----------------------------E~~~----~~~i~~l~ 185 (381)
T 3iv8_A 146 -----DFIRPSDDTMIDTICANSD--VIAKVTLAP-----------------------------ENNK----PEHIEKLV 185 (381)
T ss_dssp -----TTCCCCCHHHHHHHHHTTT--SEEEEEECC-----------------------------TTSC----HHHHHHHH
T ss_pred -----HHcCCCCHHHHHHHHhccC--CeEEEEECC-----------------------------CCCc----HHHHHHHH
Confidence 1222356666666654321 333333331 1000 23333333
Q ss_pred hhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCC------------Cce-eEcCCC
Q 010547 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD------------TRF-KCAPPI 344 (507)
Q Consensus 278 ~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~------------~~~-~~~p~~ 344 (507)
+. |..+.+.|... +.++...+.+.|.... .|+......+.... ... .++..+
T Consensus 186 ~~-------gi~vs~GHs~A---~~e~~~~a~~~Ga~~~-----THlfNaM~~~~hR~PG~vga~l~~~~~~~elI~DG~ 250 (381)
T 3iv8_A 186 KA-------GIVVSIGHTNA---TYSEARKSFESGITFA-----THLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGF 250 (381)
T ss_dssp HT-------TCEEEECSBCC---CHHHHHHHHHTTCCEE-----SSTTSSBCCCBTTBCHHHHHHHHCTTCEEEEECSSS
T ss_pred HC-------CCEEEecCCCC---CHHHHHHHHHcCCCEe-----eeCCCCCCCccCCCCchHHHHhcCCCcEEEEEcCCc
Confidence 33 66677777543 3445555666666532 23333333222111 000 111111
Q ss_pred C-ChhhHHHHHHHHhcCCeeEEeCCCCCCChhh--h--------ccccCCccccCCCCchhhhHHHHHHHHHHh-cCCCH
Q 010547 345 R-DAANKEKLWEALMDGHIDMLSSDHSPTVPEL--K--------LLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTL 412 (507)
Q Consensus 345 ~-~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~gls~ 412 (507)
+ .......+.+.. |-.+.+-||........ . .+..|......+.++|....|...++.+.+ .++++
T Consensus 251 Hv~p~~~~~~~~~~--g~~~~lvTDam~a~G~~dg~y~lgg~~v~v~~g~~~l~~g~lAGs~l~l~~~v~~~v~~~g~~~ 328 (381)
T 3iv8_A 251 HVDYANIRIAHKIK--GEKLVLVTDATAPAGAEMDYFIFVGKKVYYRDGKCVDENGTLGGSALTMIEAVQNTVEHVGIAL 328 (381)
T ss_dssp SSCHHHHHHHHHHH--GGGEEEECCBCTTTTSCCSEEESSSCEEEEETTEEECTTCCBCSBCCCHHHHHHHHHHTTCCCH
T ss_pred cCCHHHHHHHHHhc--CCEEEEEeCcccccCCCCCeeecCCeEEEEECCEEEcCCCCccChhhhHHHHHHHHHHhhCCCH
Confidence 1 122223333443 36677889976532111 0 111222222334555555556666665544 58999
Q ss_pred HHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEe
Q 010547 413 EQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 413 ~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~ 491 (507)
++|++++|.|||+++|+ +++|+|++||.||||++|.+. .|..||++|++||+
T Consensus 329 ~~al~~aT~~pA~~lg~~~~~G~i~~G~~ADlvvld~~~---------------------------~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 329 DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRDF---------------------------NVKATVVNGQYEQN 381 (381)
T ss_dssp HHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTTC---------------------------CEEEEEETTEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCCceECCCCcCCEEEECCCC---------------------------CEEEEEECCEEeeC
Confidence 99999999999999999 557999999999999999541 68999999999984
No 56
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.97 E-value=5e-31 Score=281.70 Aligned_cols=174 Identities=22% Similarity=0.275 Sum_probs=125.4
Q ss_pred cceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC---------CCCCCCcEEecCCCEEecceeecccccCCCCC
Q 010547 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~---------~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~ 112 (507)
..|++|+|++|+|++++.++||.|+||||++||+...+. ..+.++++||++|++|+|||||+|+|+..+
T Consensus 336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P-- 413 (840)
T 4gy7_A 336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICP-- 413 (840)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCC--
Confidence 568999999999999999999999999999999753211 112478999999999999999999998653
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCC------CCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSD------PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
.....++..|+||++...++.. ................ ....+++....... ....+.+.++.
T Consensus 414 -------~~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~-~~~~vn~g~~~~~~---~~~~~~L~el~ 482 (840)
T 4gy7_A 414 -------QLVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQST-DDLPLNFGFTGKGS---SSKPDELHEII 482 (840)
T ss_dssp -------HHHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHT-TTSSSEEEEEEECC---CSSSHHHHHHH
T ss_pred -------CchHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhh-hcceeEEEEeCCCC---cccHHHHHHhh
Confidence 2345678899999998642111 0112233333333322 33445555543322 23346677888
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcc
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK 235 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 235 (507)
+.|+.+++.+.. +..+++.+.+.++.+++++.++.+|++...
T Consensus 483 ~aGa~g~K~~~~-------~~~t~~~i~~aL~~A~e~g~~V~ih~e~~~ 524 (840)
T 4gy7_A 483 KAGAMGLKLHED-------WGSTPAAIDNCLTIAEHHDIQINIHTDTLN 524 (840)
T ss_dssp HHTCSEEEEETT-------TCCCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred hceeeEEEeccc-------cCCCHHHHHHHHHHHHHhCCEEEEeccCcc
Confidence 899999998643 356789999999999999999999987654
No 57
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.97 E-value=5.8e-31 Score=262.98 Aligned_cols=348 Identities=17% Similarity=0.155 Sum_probs=191.8
Q ss_pred EEEEecEEECCCCc-eeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCC-C------CCC
Q 010547 45 YWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR-T------EWE 116 (507)
Q Consensus 45 ~~i~n~~i~~~~~~-~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~-~------~~~ 116 (507)
++|+|++|++++++ .+++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+.. . +.+
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~ 78 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELP---PEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVE 78 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCC---ccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHH
Confidence 68999999998874 4789999999999999765332 25689999999999999999999864311 1 112
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh--cCceeeEEEeccccCC------Ccc-----cHHHHH
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE--KRIYVDVGFWGGLVPE------NAY-----NASALE 183 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~-----~~~~~~ 183 (507)
.+...++.++++||||++++. .+.+.....+.+....+... +.........+++... .+. ..+.++
T Consensus 79 ~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (382)
T 1yrr_A 79 TLEIMQKANEKSGCTNYLPTL-ITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD 157 (382)
T ss_dssp HHHHHHHHHHHTTEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHCTTSBCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEEeec-CCCCHHHHHHHHHHHHHHhhccCCceeEEEEeCCcCCccccCCCCHHHccCCCHHHHH
Confidence 344567889999999999875 32221111112222222222 1112222222222111 111 124455
Q ss_pred HHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEE-ecC-CcccchhhhhcccC-cCCccc-cccccCC
Q 010547 184 ALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE-MEKGSERHVKLEDD-TLDTRS-YSTYLKT 259 (507)
Q Consensus 184 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 259 (507)
+.+.|...++.+. ....+.+.++++.|+++|+++.+ |+. ....+...+..... .++... .......
T Consensus 158 -~~~~~~~~ik~~~---------~~~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~ 227 (382)
T 1yrr_A 158 -FLCENADVITKVT---------LAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGR 227 (382)
T ss_dssp -HHHHTTTTEEEEE---------ECGGGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHHHHHTCCEESSTTTTSCCBCSS
T ss_pred -HHHhcCCCEEEEE---------ECCCCChHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHcCCCeeEECCCCCCccccC
Confidence 6666655555531 01114445789999999999998 987 34444433332110 000000 0000001
Q ss_pred CChhHHHHHHHHHHHHHHhhccCCCCCCc-eEEEEecCCh-hHHHHHHHHHHhCCCCEEEecccccccccccCCCCCC--
Q 010547 260 RPPSWEEAAIRELLTVAKDTRTDGPAEGA-HLHIVHLSDA-SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD-- 335 (507)
Q Consensus 260 ~p~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~~~~h~~~~-~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~-- 335 (507)
.+. .+...++ .+ +. .-.+.|..+. +...+.+.+.. ...+.. ++.. ....+
T Consensus 228 ~~g-----~~~~~l~--~~--------~~~~~~~~h~~~~~~~~~~~~~~~~--~~~~~~--~~d~-------~~~~g~~ 281 (382)
T 1yrr_A 228 EPG-----LAGAILD--EA--------DIYCGIIADGLHVDYANIRNAKRLK--GDKLCL--VTDA-------TAPAGAN 281 (382)
T ss_dssp CCH-----HHHHHHH--CT--------TCEEEEECSSSSSCHHHHHHHHHHH--GGGEEE--ECCB-------CTTTTSC
T ss_pred Ccc-----hhhHhhc--CC--------cceeeecCcccccCHHHHHHHHHcC--CCcEEE--ECcC-------hHhcCCC
Confidence 111 1111111 00 11 1134555431 14444444433 022221 2211 11111
Q ss_pred -CceeEcCCCCChhhHHHHHHHHhcCCee-EEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHH-hcCCCH
Q 010547 336 -TRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTL 412 (507)
Q Consensus 336 -~~~~~~p~~~~~~~~~~~~~~l~~G~~~-~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~gls~ 412 (507)
..+... .+..+++.|+.+ +.|||... ... +...++.+. ..++|+
T Consensus 282 ~~~~~~~----------~~~~~~~~Gv~~~~~Gt~~g~------------------~~~-----~~~~~~~~~~~~g~~~ 328 (382)
T 1yrr_A 282 IEQFIFA----------GKTIYYRNGLCVDENGTLSGS------------------SLT-----MIEGVRNLVEHCGIAL 328 (382)
T ss_dssp CSEEEET----------TEEEEECSSCEECTTCCEEEB------------------CCC-----HHHHHHHHHHHHCCCH
T ss_pred CceEEEC----------CEEEEEECCEEEeCCCcCcCC------------------ccC-----HHHHHHHHHHHhCCCH
Confidence 011100 011234557654 22333210 000 222233333 579999
Q ss_pred HHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEe
Q 010547 413 EQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 413 ~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~ 491 (507)
+++++++|.|||++||+ +++|+|++||.||||++|.+. .|..||++|++||+
T Consensus 329 ~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~~---------------------------~v~~v~~~G~~v~~ 381 (382)
T 1yrr_A 329 DEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDF---------------------------KITKTIVNGNEVVT 381 (382)
T ss_dssp HHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTS---------------------------CEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCccCCCCCCCEEEECCCC---------------------------CEEEEEECCEEEEe
Confidence 99999999999999999 568999999999999999662 68999999999997
Q ss_pred c
Q 010547 492 E 492 (507)
Q Consensus 492 ~ 492 (507)
+
T Consensus 382 ~ 382 (382)
T 1yrr_A 382 Q 382 (382)
T ss_dssp C
T ss_pred C
Confidence 5
No 58
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.97 E-value=7.2e-30 Score=261.38 Aligned_cols=359 Identities=16% Similarity=0.086 Sum_probs=202.4
Q ss_pred cceEEEEecEEECCCC-ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC------
Q 010547 42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------ 114 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~-~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~------ 114 (507)
+++++++|+.+. ++ +.+++|+|+||||++|++..+ .++||++|++|+|||||+|+|+.......
T Consensus 11 m~~l~~~~~~~~--~~~~~~~~v~I~~g~I~~Ig~~~~-------~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~ 81 (458)
T 4f0l_A 11 QHFIHARQALLP--DGWAENVRIGIAGGVICSIETGVL-------AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRG 81 (458)
T ss_dssp CEEEEEEEEEET--TEEEEEEEEEEETTEEEEEECSCC-------CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCC
T ss_pred hhHhhhcceecc--CccccCceEEEECCEEEEEeCCCc-------cccccCCCCEEccCceecccchhhhhhcccccccc
Confidence 456788888773 44 468999999999999998743 35689999999999999999995321100
Q ss_pred --CCC-------------------h----hHHHHHHHhCCceEEEeCCC-----CCCCCCCCHHHHHHHHHHHhc---Cc
Q 010547 115 --WEG-------------------F----PSGTKAAAAGGITTLIDMPL-----NSDPSTISTETLKLKVDAAEK---RI 161 (507)
Q Consensus 115 --~~~-------------------~----~~~~~~~l~~GvTt~~~~~~-----~~~p~~~~~~~~~~~~~~~~~---~~ 161 (507)
... + .....+++++||||+.++.. +..+.....+......++... +.
T Consensus 82 ~~~~~~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~ 161 (458)
T 4f0l_A 82 PSADSFWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGL 161 (458)
T ss_dssp SCSSTTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEE
T ss_pred cCCCcHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeE
Confidence 011 1 12234578999999998521 111222223333333333332 22
Q ss_pred eeeEEEec-----cccCCC---------cccHHHHHHHHH----cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc
Q 010547 162 YVDVGFWG-----GLVPEN---------AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY 223 (507)
Q Consensus 162 ~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 223 (507)
........ +..+.. ....+.++++.+ .+...+. +.+ ...+..+++.++++++.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~l~~~~~~a~-- 234 (458)
T 4f0l_A 162 TLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLG--VAP---HSLRAVTPDELDSVTQLLP-- 234 (458)
T ss_dssp EEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEEC--BEE---CBTTTSCHHHHHHHTTSST--
T ss_pred EEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEE--Eec---CCcCcCCHHHHHHHHHHhc--
Confidence 11111110 111110 111222233322 1222221 111 3334678999999999888
Q ss_pred CCcEEEecCCcc-cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHH
Q 010547 224 KRPLLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSL 302 (507)
Q Consensus 224 ~~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~ 302 (507)
+.++.+|+.+.. .+.......+ . ..+..+.+... .+.+..+.|+... ..
T Consensus 235 g~~v~~H~~e~~~~~~~~~~~~g-------------~-------~~~~~l~~~g~--------l~~~~~~~H~~~~--~~ 284 (458)
T 4f0l_A 235 DAPVHIHVAEQVKEVEDCIAWSG-------------K-------RPVEWLLDHQD--------VTARWCLIHATHM--SD 284 (458)
T ss_dssp TSCEEEEESCSHHHHHHHHHHHS-------------S-------CHHHHHHHHSC--------CCTTEEEEECCSC--CH
T ss_pred CCCEEEEeCCCHHHHHHHHHHhC-------------C-------CHHHHHHHcCC--------CCCCeEEEEeccC--CH
Confidence 999999985432 2111111000 0 00111121111 1556777888753 33
Q ss_pred HHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccC
Q 010547 303 DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEG 382 (507)
Q Consensus 303 ~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~ 382 (507)
+.++.+++.|+.+. +||..-... +. ...++.++++.|+++++|||.....
T Consensus 285 ~~~~~l~~~g~~~~--~~p~s~~~l-------~~------------~~~~~~~~~~~Gv~v~lgtD~~~~~--------- 334 (458)
T 4f0l_A 285 EETKHMAKAGAIAG--LCPVTEANL-------GD------------GTFNATEFAAAGGKFGIGSDSNVLI--------- 334 (458)
T ss_dssp HHHHHHHHHTCEEE--ECHHHHHHT-------TC------------CCCCHHHHHHTTCEEEECCBTTSSC---------
T ss_pred HHHHHHHHcCCeEE--ECccccccc-------cC------------CCccHHHHHHCCCeEEEECCCCCCC---------
Confidence 45666666676543 465321110 00 0113467788999999999943210
Q ss_pred CccccCCCCchhhh-HHHHHHHHHH---------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCce
Q 010547 383 NFLKAWGGISSLQF-VLPVTWSYGR---------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEF 452 (507)
Q Consensus 383 ~~~~~~~~~~~~~~-~l~~~~~~~~---------~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~ 452 (507)
..++. .......... ..+++++++++++|.|||++||+ ++|+|++||.|||||+|.+.++
T Consensus 335 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~-~~G~l~~G~~ADlvv~d~~~~~ 404 (458)
T 4f0l_A 335 ---------GIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR-PEDGLKKGASADFVSLDVERLP 404 (458)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC-TTCSSSTTSBCCEEEEECTTST
T ss_pred ---------CHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC-CCCcCCCCCcCCEEEEeCCCCc
Confidence 11111 1111111111 12589999999999999999999 5899999999999999987643
Q ss_pred EeCCCCCcccCCCCCccccCcEEe--eEEEEEEECCEEEEecCccc
Q 010547 453 ELDNDHPVHMKHPSISAYLGRRLS--GKVLATISRGNLVYKEGNHA 496 (507)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~--~~V~~v~v~G~~v~~~g~~~ 496 (507)
..+ . .+++..+... +.|..|||+|++||++|+++
T Consensus 405 ~~~---------~-~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 440 (458)
T 4f0l_A 405 HAK---------G-DVVLDGWIFAGRAHVCDVWVRGVKQVEGGRHR 440 (458)
T ss_dssp TCC---------H-HHHHHHHHHTSCCEEEEEEETTEEEEETTEET
T ss_pred cCC---------c-ccHHHhCeEcCCCCceEEEECCEEEEECCEeC
Confidence 221 1 2222211111 17999999999999999985
No 59
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.97 E-value=7.9e-30 Score=253.69 Aligned_cols=356 Identities=18% Similarity=0.128 Sum_probs=189.4
Q ss_pred ceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCCCC--
Q 010547 43 NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG-- 117 (507)
Q Consensus 43 ~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~~~-- 117 (507)
..++|+|+||+|+.. +.+++|+|+||||++||+..+.. ++++++||++|++|+|||||+|+|+..........
T Consensus 2 ~~~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~--~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~ 79 (403)
T 3mtw_A 2 EIKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAV--PAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSL 79 (403)
T ss_dssp CEEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCC--CTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGG
T ss_pred CcEEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCC--CCCCEEEECCCCEEEeChheeeeCCccccccCccccc
Confidence 357999999999854 45799999999999999876542 13789999999999999999999987654432211
Q ss_pred -----h-----hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEE------eccccCC-------
Q 010547 118 -----F-----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF------WGGLVPE------- 174 (507)
Q Consensus 118 -----~-----~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~------- 174 (507)
. .......+..++++..+.. .......................... .......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (403)
T 3mtw_A 80 EYSDRFWSVVQTANAKKTLEAGFTTVRNVG----AADYDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSM 155 (403)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTEEEEEECC----CSTTHHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGG
T ss_pred cccHHHHhhhhhhhhhhccccccceeeccc----cccccchhhhhhhhcccccccccccccccccccccccccccccccc
Confidence 0 0122345688999988764 11111111111111111111111100 0000000
Q ss_pred ------Ccc----cHHHHHHHHHcCCcEEEEccc-----CCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchh
Q 010547 175 ------NAY----NASALEALLNAGVLGLKSFMC-----PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (507)
Q Consensus 175 ------~~~----~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 239 (507)
... ...........+......... ............+++.++++.+++.+.++..|.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 235 (403)
T 3mtw_A 156 DQKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIRE 235 (403)
T ss_dssp CCCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHH
T ss_pred ccccccccchhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhHHH
Confidence 000 112233334455544444321 11112334567889999999999999999999855432111
Q ss_pred hhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEec
Q 010547 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319 (507)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~ 319 (507)
...... ... ....... . ......... . ....+... ............+... ..
T Consensus 236 ~~~~~~-----~~~-~~~~~~~--~-----~~~~~~~~~--------~--~~~~~~~~--~~~~~~~~~~~~~~~~--~~ 288 (403)
T 3mtw_A 236 AVRAGV-----DTI-EHASLVD--D-----EGIKLAVQK--------G--AYFSMDIY--NTDYTQAEGKKNGVLE--DN 288 (403)
T ss_dssp HHHTTC-----SEE-EECTTCC--H-----HHHHHHHHH--------T--CEEECCCS--THHHHHHHHHHHTCCH--HH
T ss_pred HHHhcc-----ccc-ccccccc--c-----chhhhhccc--------c--ceeeeeec--cchhhhhhhhccccch--hh
Confidence 111000 000 0000000 0 000000000 0 00111111 0011111111111000 00
Q ss_pred ccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHH
Q 010547 320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLP 399 (507)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 399 (507)
++.. . .............++.|+.+.+|||........ +.
T Consensus 289 ~~~~----------------~---~~~~~~~~~~~~~~~~g~~~~~gt~~~~~~~~~---------------------~~ 328 (403)
T 3mtw_A 289 LRKD----------------R---DIGELQRENFRKALKAGVKMVYGTDAGIYPHGD---------------------NA 328 (403)
T ss_dssp HHHH----------------H---HHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTC---------------------GG
T ss_pred cccc----------------c---cccccccchhhHHHhcCCeEeeccCCcccccch---------------------HH
Confidence 0000 0 001112233456677899999999976443221 11
Q ss_pred HHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeE
Q 010547 400 VTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGK 478 (507)
Q Consensus 400 ~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (507)
..+....+.|+|++|+++++|.|||++||+ +++|+|++||+|||||||.|+..++ ....+
T Consensus 329 ~~~~~~~~~gls~~eal~~~T~npA~~lgl~~~~GsI~~G~~ADlvvld~dPl~di-------------------~~~~~ 389 (403)
T 3mtw_A 329 KQFAVMVRYGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADV-------------------TTLEK 389 (403)
T ss_dssp GHHHHHHHTTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCG-------------------GGGGS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcceEEEECCChhHhH-------------------hhhcC
Confidence 123345678999999999999999999999 6789999999999999997753221 11135
Q ss_pred EEEEEECCEEEE
Q 010547 479 VLATISRGNLVY 490 (507)
Q Consensus 479 V~~v~v~G~~v~ 490 (507)
|..||++||+|.
T Consensus 390 v~~Vi~~G~vvk 401 (403)
T 3mtw_A 390 PVFVMKGGAVVK 401 (403)
T ss_dssp CSEEEETTEEEE
T ss_pred cCEEEECCEEEe
Confidence 889999999764
No 60
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.97 E-value=8.4e-30 Score=260.10 Aligned_cols=360 Identities=17% Similarity=0.156 Sum_probs=206.5
Q ss_pred EEEecEEECCCCc-eeeeEEE-eCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCC---------
Q 010547 46 WLTSKRIVTPKGV-ISGAVEI-KEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--------- 114 (507)
Q Consensus 46 ~i~n~~i~~~~~~-~~~~I~I-~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~--------- 114 (507)
.+..++++.++++ .+++|.| +||+|++|++..+. .+++|++| +|+|||||+|+|+.......
T Consensus 3 ~~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~------~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~ 75 (453)
T 3mdu_A 3 AIFAERALLPEGWARNVRFEISADGVLAEIRPDANA------DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPN 75 (453)
T ss_dssp EEEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC------TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTT
T ss_pred ccchhheecCCceecCeEEEEecCCEEEEecCCCCc------ccccccCC-cccccceecccchHHHhhccccccccCCC
Confidence 3557788888885 5899999 89999999987542 24679999 99999999999985321110
Q ss_pred -----C-------------CChh----HHHHHHHhCCceEEEeCCC-C----CCCCCCCHHHHHHHHHHHhc-CceeeEE
Q 010547 115 -----W-------------EGFP----SGTKAAAAGGITTLIDMPL-N----SDPSTISTETLKLKVDAAEK-RIYVDVG 166 (507)
Q Consensus 115 -----~-------------~~~~----~~~~~~l~~GvTt~~~~~~-~----~~p~~~~~~~~~~~~~~~~~-~~~~~~~ 166 (507)
| +.+. ....+++++||||+.++.. . ..+.....+......+++.. +....+.
T Consensus 76 ~~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~ 155 (453)
T 3mdu_A 76 DSFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLL 155 (453)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEE
T ss_pred CcHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEe
Confidence 0 1111 1234578999999998531 1 11122223333444444332 1111111
Q ss_pred E----eccccCCC------------cccHHHHHHHH----HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCc
Q 010547 167 F----WGGLVPEN------------AYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 167 ~----~~~~~~~~------------~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
. ..++.... ....+.++++. ..+. .+. +.+ ......++++++++++.|+ .|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~p---~~~~~~~~e~l~~~~~~A~-~g~~ 228 (453)
T 3mdu_A 156 PVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH-SLG--LCF---HSLRAVTPQQIATVLAAGH-DDLP 228 (453)
T ss_dssp ECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC-EEC--EEE---EETTTSCHHHHHHHHTSSC-TTSC
T ss_pred cchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC-eEE--Eec---CCCCcCCHHHHHHHHHHHh-cCCC
Confidence 1 11111010 01112222222 1222 221 111 2234679999999999999 9999
Q ss_pred EEEecCC-cccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHH
Q 010547 227 LLVHAEM-EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLL 305 (507)
Q Consensus 227 v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i 305 (507)
+.+|+.+ ...+.......+ ...++.+.+.. ..+.+..+.|+... ..+.+
T Consensus 229 v~~H~~e~~~e~~~~~~~~g--------------------~~~v~~l~~~g--------~~~~~~~~~H~~~~--~~~~i 278 (453)
T 3mdu_A 229 VHIHIAEQQKEVDDCQAWSG--------------------RRPLQWLYENV--------AVDQRWCLVHATHA--DPAEV 278 (453)
T ss_dssp EEEEESCSHHHHHHHHHHHS--------------------SCHHHHHHHHS--------CCCTTEEEEECCSC--CHHHH
T ss_pred EEEEeCCCHHHHHHHHHHhC--------------------CCHHHHHHHcC--------CCCCCeEEEEcCCC--CHHHH
Confidence 9999743 322221111100 00112222221 11556778888763 34456
Q ss_pred HHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC-ChhhhccccCCc
Q 010547 306 MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT-VPELKLLDEGNF 384 (507)
Q Consensus 306 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~-~~~~~~~~~~~~ 384 (507)
+.+++.|+.+. +||...... +. ...++.++++.|+.+++|||.... ++...
T Consensus 279 ~~la~~g~~v~--~~P~sn~~l-------g~------------g~~p~~~~~~~Gv~v~lgtD~~~~~~~~~~------- 330 (453)
T 3mdu_A 279 AAMARSGAVAG--LCLSTEANL-------GD------------GIFPATDFLAQGGRLGIGSDSHVSLSVVEE------- 330 (453)
T ss_dssp HHHHHHTCEEE--ECHHHHHHT-------TC------------CCCCHHHHHHTTCEEEECCBTCSCCCHHHH-------
T ss_pred HHHHHcCCEEE--ECchhHhhc-------CC------------CCCCHHHHHHCCCEEEEECCCCCCCCHHHH-------
Confidence 66667776544 466321110 00 011345778899999999995422 11110
Q ss_pred cccCCCCchhhhHHHHHHHHHH----------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEe
Q 010547 385 LKAWGGISSLQFVLPVTWSYGR----------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFEL 454 (507)
Q Consensus 385 ~~~~~~~~~~~~~l~~~~~~~~----------~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~ 454 (507)
........... +.+++++++++++|.|||+++|+ ++|+|++|+.|||+++|.+.++..
T Consensus 331 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~-~~G~l~~G~~AD~~~~d~~~~~~~ 398 (453)
T 3mdu_A 331 -----------LRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ-PIGSLAVGRRADLLVLDGNDPYLA 398 (453)
T ss_dssp -----------HHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS-SCSSCCTTSBCCEEEECTTCHHHH
T ss_pred -----------HHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC-CCCccCCCCcCCEEEEeCCCcccc
Confidence 00111111111 12789999999999999999999 789999999999999998754322
Q ss_pred CCCCCcccCCCCCccccCcEEe---eEEEEEEECCEEEEecCcccC
Q 010547 455 DNDHPVHMKHPSISAYLGRRLS---GKVLATISRGNLVYKEGNHAP 497 (507)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~---~~V~~v~v~G~~v~~~g~~~~ 497 (507)
+ ... .+++..+... +.|..|||+|++||++|++++
T Consensus 399 ~-------~~~-~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 436 (453)
T 3mdu_A 399 S-------AEG-DALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHAG 436 (453)
T ss_dssp T-------CCH-HHHHHHHHHHCCGGGEEEEEETTEEEEBTTBCTT
T ss_pred C-------CCc-cChHHHheeeCCCCCeeEEEECCEEEEECCccCC
Confidence 1 011 3333322222 469999999999999999863
No 61
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.96 E-value=4.9e-30 Score=259.48 Aligned_cols=342 Identities=15% Similarity=0.098 Sum_probs=185.8
Q ss_pred CCcceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC------
Q 010547 40 LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG------ 111 (507)
Q Consensus 40 ~~~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~------ 111 (507)
.++.+++|+|++|+++++ +.+++|+|+||||++|++..+.+..+.+.++||++ ++|+|||||+|+|+....
T Consensus 34 ~~~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~ 112 (420)
T 2imr_A 34 DAHTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQAL 112 (420)
T ss_dssp --CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHC
T ss_pred cccccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccC
Confidence 345679999999999874 35789999999999999753321001256899999 999999999999997641
Q ss_pred -CCCC--------------CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc
Q 010547 112 -RTEW--------------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA 176 (507)
Q Consensus 112 -~~~~--------------~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (507)
...| .......+.++++||||+++++ . ..+.+.. ...... +......++....+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~---~~~~~g-~r~~~~~~~~~~~~ 181 (420)
T 2imr_A 113 PYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIV-W------APEVMDA---LLARED-LSGTLYFEVLNPFP 181 (420)
T ss_dssp HHHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEE-C------SHHHHHH---HHTCTT-CCEEEEEEECBCCG
T ss_pred CHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEcc-C------CHHHHHH---HHHhcC-cEEEEEeeecCCCc
Confidence 1111 1123345678999999999875 2 1233322 122211 11111111211111
Q ss_pred c----cHH----HHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCc-ccchhhhhcccCc
Q 010547 177 Y----NAS----ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDT 247 (507)
Q Consensus 177 ~----~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~-~~~~~~~~~~~~~ 247 (507)
. ..+ .++.+...+...++.++.+ ...+..+++.++++++.|+++|+++.+|+.+. ..+.......+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~ 258 (420)
T 2imr_A 182 DKADEVFAAARTHLERWRRLERPGLRLGLSP---HTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPL 258 (420)
T ss_dssp GGHHHHHHHHHHHHHHHHTTCBTTEEEEEEE---CCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHSCSTT
T ss_pred hhhHHHHHHHHHHHHHHhcccCCceEEEecC---CcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHhhccc
Confidence 1 112 2333333222223444333 22345789999999999999999999999643 3333222211000
Q ss_pred -------CCcccc--ccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEe
Q 010547 248 -------LDTRSY--STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 318 (507)
Q Consensus 248 -------~~~~~~--~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~ 318 (507)
...... ..+....+... .++...+... . +.+..+.|+.+- ..+.++.+++.|+. +.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~-l-------~~~~~i~H~~~l--~~~~i~~l~~~g~~--~~ 323 (420)
T 2imr_A 259 WDNRMPALYPHTLAEVIGREPGPDLT---PVRYLDELGV-L-------AARPTLVHMVNV--TPDDIARVARAGCA--VV 323 (420)
T ss_dssp GGGSCGGGSCSSHHHHHTSCCCTTCC---HHHHHHHHTC-G-------GGCCEEEECCSC--CHHHHHHHHHHTCC--EE
T ss_pred cccccccchhhhhhhhccccccCCCC---HHHHHHHcCC-C-------CCCeEEEecCcC--CHHHHHHHHHcCCe--EE
Confidence 000000 00000011100 1111111110 0 122334444432 11234445555654 44
Q ss_pred cccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHH
Q 010547 319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVL 398 (507)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 398 (507)
+||+.... + + ...| .+.+++++|+++++|||+.+..... .. +
T Consensus 324 ~~p~~~~~----~---~---~~~~---------~l~~~~~~Gv~~~lgtD~~~~~~~~---------------~~----~ 365 (420)
T 2imr_A 324 TCPRSNHH----L---E---CGTF---------DWPAFAAAGVEVALGTDSVASGETL---------------NV----R 365 (420)
T ss_dssp ECHHHHHH----T---T---CCCC---------CHHHHHHTTCCEEECCCCHHHHSCS---------------CT----H
T ss_pred ECHHHHHH----h---c---cCCC---------CHHHHHHCCCeEEEECCCCccCCCC---------------CH----H
Confidence 57753211 0 0 0122 2346788999999999975321110 00 1
Q ss_pred HHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCCcEEEEcCCC
Q 010547 399 PVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEA 450 (507)
Q Consensus 399 ~~~~~~~~-~~gls~~~al~~~T~n~A~~lgl-~~~G~I~~G~~ADlvvld~~~ 450 (507)
..+..... ..++|++++++++|.|||++||+ +++|+|++||.||| |+|+++
T Consensus 366 ~~~~~~~~~~~~ls~~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~~ 418 (420)
T 2imr_A 366 EEVTFARQLYPGLDPRVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELSR 418 (420)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGCC
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECCC
Confidence 11111112 25899999999999999999999 56899999999999 788663
No 62
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.96 E-value=4.8e-28 Score=242.14 Aligned_cols=94 Identities=21% Similarity=0.269 Sum_probs=69.3
Q ss_pred CcceEEEEecEEECCCC---ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCCCC--
Q 010547 41 PYNQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW-- 115 (507)
Q Consensus 41 ~~~~~~i~n~~i~~~~~---~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~~~-- 115 (507)
++.+++|+|++|+|+++ +.+++|+|+||||++|++....+ +++++||++|++|+|||||+|+|+........
T Consensus 2 sM~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~---~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~ 78 (426)
T 3mkv_A 2 SLTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRV 78 (426)
T ss_dssp -CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHH
T ss_pred CcCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCC---CCCEEEECCCCEEEeChhhhhhCcccccCCcccc
Confidence 46789999999999875 35789999999999999876544 37899999999999999999999876533211
Q ss_pred ---CChh------HHHHHHHhCCceEEEeCC
Q 010547 116 ---EGFP------SGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 116 ---~~~~------~~~~~~l~~GvTt~~~~~ 137 (507)
.... .........++|+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (426)
T 3mkv_A 79 ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAG 109 (426)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTEEEEEECS
T ss_pred cccchhHHHHHHHhhhhhhhccccccccccc
Confidence 1111 112334567777777543
No 63
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.96 E-value=1.3e-31 Score=280.89 Aligned_cols=379 Identities=18% Similarity=0.174 Sum_probs=204.7
Q ss_pred CCCCcceEEEEecEEECCCCceeeeEEEeCCEEEEeecCCCCC-------CCCCCCcEEecCCCEEecceeecccccCCC
Q 010547 38 SLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP-------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110 (507)
Q Consensus 38 ~~~~~~~~~i~n~~i~~~~~~~~~~I~I~dG~I~~Vg~~~~~~-------~~~~~~~viD~~g~~v~PGfID~H~H~~~~ 110 (507)
......|++|+|++|+|++++.++||+|+||||++||+..++. ..+.++++||++|++|+|||||+|+|+..+
T Consensus 60 ~~~~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~ 139 (566)
T 4ep8_C 60 LAADCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICP 139 (566)
T ss_dssp CGGGSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCT
T ss_pred CCCCCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCC
Confidence 3345779999999999999999999999999999999753321 112478999999999999999999998875
Q ss_pred CCCCCCChhHHHHHHHhCCceEEEeCCCCCC-----CCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHH
Q 010547 111 GRTEWEGFPSGTKAAAAGGITTLIDMPLNSD-----PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185 (507)
Q Consensus 111 ~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~-----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (507)
... ......+.++.......+. .....................+++..+++..... ......+
T Consensus 140 ~~~---------~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~ 207 (566)
T 4ep8_C 140 QQA---------EEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQ---PDALREQ 207 (566)
T ss_dssp THH---------HHHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSC---HHHHHHH
T ss_pred Ccc---------chhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHHHHHhccccceeeeeeccccccc---chhhHHH
Confidence 321 2223344554443210000 1112222223333334445566776665554443 3455666
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccch---hhhhcccCcCCccccccccCCCCh
Q 010547 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPP 262 (507)
Q Consensus 186 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~ 262 (507)
...++.+++.+..+ ......+......+.........|.+...... ....... ......+....+.
T Consensus 208 ~~a~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~----~~~~~~~~~~~~~ 276 (566)
T 4ep8_C 208 VAAGVIGLKIHEDW-------GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIG----GRTIHTFHTEGAG 276 (566)
T ss_dssp HHHTCSEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHT----TCCEEETTTTSTT
T ss_pred hhhccccccccccc-------cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhcc----Cccccccccccch
Confidence 67788888875432 45667778888888889999999976544321 1111100 0001111111111
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcC
Q 010547 263 SWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAP 342 (507)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p 342 (507)
......+.+........ ....+..|.... ...+..... ....|++.++..... ......
T Consensus 277 ~~~~~~~~~~~~~a~~~-------~~~~~~~~~~~~-~~~~e~~~~---------~~~~h~l~~~~~~~~---~~~~~~- 335 (566)
T 4ep8_C 277 GGHAPDIITACAHPNIL-------PSSTNPTLPYTL-NTIDEHLDM---------LMVCHHLDPDIAEDV---AFAESR- 335 (566)
T ss_dssp SSSTTTGGGGGGCTTEE-------EEECSTTSSCBT-THHHHHHHH---------HHHHHTCCTTCHHHH---HHHHHH-
T ss_pred hHHHHHHHHHHHHHhhc-------CCceeehhHHHH-HHhhcccce---------EEEeecccCChhhHH---hhccCC-
Confidence 11111111111100000 000111111111 111111111 012333332211100 000000
Q ss_pred CCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhh
Q 010547 343 PIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSE 421 (507)
Q Consensus 343 ~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~ 421 (507)
. ...........+..|....+++|+.+.....+.. ...+.+.......+..++. .....+++++++++++|.
T Consensus 336 -~-~~~~~~~~~~l~~~G~~~~i~sD~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTi 408 (566)
T 4ep8_C 336 -I-RRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI-----LRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTI 408 (566)
T ss_dssp -C-CHHHHHHHHHHHHHTSSCEECCCTTSSSCTTCHH-----HHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTH
T ss_pred -C-cccchHHHHHHHhCCCcceEeecccccccccccc-----cccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHH
Confidence 0 1222233344566799999999998765433210 0000000000000000000 012335899999999999
Q ss_pred chhHHhCC-CCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEe
Q 010547 422 RPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 491 (507)
Q Consensus 422 n~A~~lgl-~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~ 491 (507)
|||++||+ +++|+|++||+|||||||++. +. . ++..|+++|.+||-
T Consensus 409 NPAralGL~d~iGSIevGK~ADLVL~Dp~~---------f~-v--------------kP~~v~~~G~iv~a 455 (566)
T 4ep8_C 409 NPALTHGIAHEVGSIEVGKLADLVVWSPAF---------FG-V--------------KPATVIKGGMIAIA 455 (566)
T ss_dssp HHHHHTTCTTTSSSSCTTSBCCEEEECGGG---------TT-T--------------SCSEEEETTEEEEE
T ss_pred HHHHHhCCCCCCcCCCCCCCCCEEEECccc---------cC-C--------------CeeEEeeCCEEEEc
Confidence 99999999 788999999999999999763 11 1 45789999999994
No 64
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.96 E-value=5.7e-28 Score=248.85 Aligned_cols=330 Identities=17% Similarity=0.116 Sum_probs=203.0
Q ss_pred eEEEEecEEECCCCc--eeeeEEEeCCEEEEeecCCCCCCC--CCCCcEEecCCCEEecceeecccccCCCCC-------
Q 010547 44 QYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRN--SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR------- 112 (507)
Q Consensus 44 ~~~i~n~~i~~~~~~--~~~~I~I~dG~I~~Vg~~~~~~~~--~~~~~viD~~g~~v~PGfID~H~H~~~~~~------- 112 (507)
+++|+|++|+|+++. ...+|+|+||||++||+..+.... ..+.++||++|++|+|||||+|+|+..++.
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 479999999998774 478999999999999986543110 126789999999999999999999732100
Q ss_pred ---C----------------------------------------------------------------------------
Q 010547 113 ---T---------------------------------------------------------------------------- 113 (507)
Q Consensus 113 ---~---------------------------------------------------------------------------- 113 (507)
.
T Consensus 117 ~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~tG 196 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTG 196 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETTTT
T ss_pred CCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCCCc
Confidence 0
Q ss_pred -------------------CCC----ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh-cCceeeEEEec
Q 010547 114 -------------------EWE----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-KRIYVDVGFWG 169 (507)
Q Consensus 114 -------------------~~~----~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 169 (507)
+.+ .+....+.+++.|+|++.++.. ....+..+.+... +...+++..+.
T Consensus 197 ~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~-------~~~~~~~~~~l~~~g~l~~rv~~~~ 269 (534)
T 3icj_A 197 IVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSV-------GEKALKALFELEREGRLKMNVFAYL 269 (534)
T ss_dssp EEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEE-------CHHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred eeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCC-------CHHHHHHHHHHHhCCCCcEEEEEec
Confidence 000 0112234567899999998741 1333333333322 33445554432
Q ss_pred cccCCCcccHHHHHHHHH-------cCCcEEEEccc----------------CCCCCCCCCCCHHHHHHHHHHHHhcCCc
Q 010547 170 GLVPENAYNASALEALLN-------AGVLGLKSFMC----------------PSGINDFPMTNASHIKEGLSVLARYKRP 226 (507)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~----------------~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 226 (507)
.. ...+.+.+... ....++|.+.. .++..+.+..++++++++++.|+++|.+
T Consensus 270 ~~-----~~~~~~~~~~~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~ 344 (534)
T 3icj_A 270 SP-----ELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLD 344 (534)
T ss_dssp CG-----GGHHHHHHHTCCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCE
T ss_pred CH-----HHHHHHHHhccccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCE
Confidence 11 12223322211 11345666531 1122355568999999999999999999
Q ss_pred EEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHH
Q 010547 227 LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLM 306 (507)
Q Consensus 227 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~ 306 (507)
+.+|+.. ..++...++...+. +.+..+.|+.. -..+.++
T Consensus 345 v~~Ha~g--------------------------------d~ai~~~l~a~~~~-------~~r~~ieH~~~--~~~e~i~ 383 (534)
T 3icj_A 345 VAVHAIG--------------------------------DKAVDVALDAFEEA-------EFSGRIEHASL--VRDDQLE 383 (534)
T ss_dssp EEEEECS--------------------------------HHHHHHHHHHHHHH-------TCCCEEEECCB--CCHHHHH
T ss_pred EEEEEcC--------------------------------hHHHHHHHHHHHhc-------cCCCEEEECCC--CCHHHHH
Confidence 9999943 22445666666654 24567888876 3455677
Q ss_pred HHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccc
Q 010547 307 EAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLK 386 (507)
Q Consensus 307 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~ 386 (507)
.+++.|+.+.. +|.+..... .. .. ...+ .......++.++++. +++++|||........
T Consensus 384 ~la~~gv~~~~--~P~~~~~~~-~~---~~--~lg~--~r~~~~~p~~~l~~~-v~valGSD~p~~~~~p---------- 442 (534)
T 3icj_A 384 RIKELKVRISA--QPHFIVSDW-WI---VN--RVGE--ERAKWAYRLKTLSSI-TKLGFSTDSPIEPADP---------- 442 (534)
T ss_dssp HHHHHTCEEEE--CTTHHHHCT-TH---HH--HHHH--HHGGGBTCHHHHHHH-SCEEECCTTTTSCCCH----------
T ss_pred HHHHcCCeEEE--ccccccchh-HH---HH--hhCH--HHHhccHHHHHHHHh-CCEEeecCCCCCCCCH----------
Confidence 77777865543 665432210 00 00 0000 000111245678888 9999999985432110
Q ss_pred cCCCCchhhhHHHHHHH--HHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEEEEcCCCceEe
Q 010547 387 AWGGISSLQFVLPVTWS--YGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFEL 454 (507)
Q Consensus 387 ~~~~~~~~~~~l~~~~~--~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlvvld~~~~~~~ 454 (507)
+........+ +..+.++|++||++++|.|||+++|++++|+|++||.||||++|.|+..++
T Consensus 443 -------~~~~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~e~~GsLe~Gk~ADlvvld~dpl~~~ 505 (534)
T 3icj_A 443 -------WVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAEDLGKLERGFRAEYIILDRDPLKEM 505 (534)
T ss_dssp -------HHHHHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTCTTCSCCSTTSBCCEEEESSCTTC--
T ss_pred -------HHHHHHHHhccccCcccCCCHHHHHHHHHHHHHHHhCCCCCeEECCCCCcCEEEECCChhhcc
Confidence 0000000000 123567999999999999999999998789999999999999998865443
No 65
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.94 E-value=1.5e-26 Score=229.79 Aligned_cols=322 Identities=19% Similarity=0.198 Sum_probs=170.2
Q ss_pred CceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCC-CCCCCChhHHHHHHHhCCceEEEe
Q 010547 57 GVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 57 ~~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~-~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
+..+++|+|+||||++|++ + + || +|++|+|||||+|+|+..+. ... .++...++.++++||||+++
T Consensus 26 ~~~~~~V~I~~g~I~~vg~---------~-~-iD-~g~~v~PGlID~H~H~~~~~~~~~-~~l~~~~~~~l~~GvTtv~d 92 (376)
T 1o12_A 26 GEFTGDVEIEEGKIVKVEK---------R-E-CI-PRGVLMPGFVDPHIHGVVGADTMN-CDFSEMEEFLYSQGVTTFLA 92 (376)
T ss_dssp EEEEEEEEEETTEEEEEEE---------C-C-SC-CSSEEEECEEEEEECEETTEETTT-TCHHHHHHHHHTTTEEEEEE
T ss_pred cccCceEEEECCEEEEeCC---------C-c-cC-CCCEEccCeEEEeecCCCCCCCCh-hhHHHHHHHHHhCCcEEEEe
Confidence 3468999999999999986 1 4 89 99999999999999997654 222 24777889999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhc-Cc--eeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHH
Q 010547 136 MPLNSDPSTISTETLKLKVDAAEK-RI--YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASH 212 (507)
Q Consensus 136 ~~~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 212 (507)
++ .+.|.....+.+....+.+.. .. ...+...+++.... ..|.. ........+.
T Consensus 93 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~g~~~~~~-----------~~g~~---------~~~~~~~~~~-- 149 (376)
T 1o12_A 93 TT-VSTSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKE-----------KKGAH---------SEKHIRPPSE-- 149 (376)
T ss_dssp EC-CSCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEECSSSCGG-----------GCTTS---------CTTTCCCCCH--
T ss_pred cc-CCCCHHHHHHHHHHHHHHhhccCCCceEEEEEEcCcCCcc-----------cCCCC---------CHHHhcCCCH--
Confidence 86 333322222223333333332 11 22222222111100 00000 0000000111
Q ss_pred HHHHHHHHHhcCC---cEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 213 IKEGLSVLARYKR---PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 213 l~~~~~~a~~~~~---~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
+..+++.. .+..+++. +. . +.++++.+. |.+
T Consensus 150 -----~~~~~~~~~~~~~~~~pe~---------------------------~~---~----~~i~~A~~~-------g~~ 183 (376)
T 1o12_A 150 -----RELSEIDSPAKMLTFAPEI---------------------------ES---S----ELLLRLVKR-------DIV 183 (376)
T ss_dssp -----HHHTTCCTTEEEEEECTTS---------------------------TT---G----GGGGGGGGG-------TCE
T ss_pred -----HHHHHhhCCeEEEEEccCC---------------------------cc---H----HHHHHHHHC-------CCE
Confidence 11222110 11111110 00 0 233444443 666
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEE-----Eeccccccccc--ccCCCCCCCce-eEcCCCC-ChhhHHHHHHHHhc-
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSIT-----VETCPHYLAFS--AEEIPDGDTRF-KCAPPIR-DAANKEKLWEALMD- 359 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~-----~~~~~~~~~~~--~~~~~~~~~~~-~~~p~~~-~~~~~~~~~~~l~~- 359 (507)
+++.|+. +..+.++.+++.|.... ...+++++... ...+....... ....... .... +..+++.
T Consensus 184 v~igH~~---~~~~~i~~a~~~G~~~itH~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~p~~---~~~~~~~~ 257 (376)
T 1o12_A 184 LSAGHSI---ATFEEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREM---VKLVYKVK 257 (376)
T ss_dssp EEECSBC---CCHHHHHHHHTTTCCEESSTTTTBCCCCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHH---HHHHHHHH
T ss_pred EEeecCc---cCHHHHHHHHHCCCCeEEecccCcCChhhcccchhhhhhcCCcceEEEeCCCcCcCHHH---HHHHHhhC
Confidence 7766643 33455666666665421 11122221100 00000000000 0000011 1122 2222333
Q ss_pred CC-eeEEeCCCCCCCh--hhhc--------cccCCccccCCCCchhhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHh
Q 010547 360 GH-IDMLSSDHSPTVP--ELKL--------LDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLA 427 (507)
Q Consensus 360 G~-~~~lgtD~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~gls~~~al~~~T~n~A~~l 427 (507)
|. ..++.||...... ...+ ...|.+....++..+....+...++.+.+ .+++++++++++|.|||++|
T Consensus 258 g~~~~~~~sd~~~~~g~~~g~~~~~g~~~~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~l 337 (376)
T 1o12_A 258 KANGIVLVTDSISAAGLKDGTTTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVEL 337 (376)
T ss_dssp TGGGEEEECCBCTTTTSCSCEEESSSSEEEEETTEEECTTSCBCCBCCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHT
T ss_pred CCCCEEEecCchhhcCCCCeeEEECCeEEEEeCCeEEeCCCcccccccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 44 6788999753211 0000 01122322344555555556666665544 68999999999999999999
Q ss_pred CCCCCCccccCCCCcEEEEcCCCceEeCCCCCcccCCCCCccccCcEEeeEEEEEEECCEEEEecC
Q 010547 428 GQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEG 493 (507)
Q Consensus 428 gl~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~v~G~~v~~~g 493 (507)
|+++.|+|++|+.|||+++|.+ +.|..||++|++||++|
T Consensus 338 gl~~~G~i~~G~~ADlv~~d~~---------------------------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 338 GLDDRGRIAEGTRADLVLLDED---------------------------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp TCTTSSCCSTTSBCCEEEECTT---------------------------CCEEEEEETTEEEEEC-
T ss_pred CCCCCccCCCCCcCCEEEECCC---------------------------CCEEEEEECCEEEeecC
Confidence 9954599999999999999965 16899999999999875
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.60 E-value=1.6e-15 Score=114.42 Aligned_cols=72 Identities=21% Similarity=0.235 Sum_probs=59.0
Q ss_pred cceEEEEecEEECCCC--ceeeeEEEeCCEEEEeecCCCCCCCCCCCcEEecCCCEEecceeecccccCCCCCC
Q 010547 42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT 113 (507)
Q Consensus 42 ~~~~~i~n~~i~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~~~~viD~~g~~v~PGfID~H~H~~~~~~~ 113 (507)
+.+++|+|++|+++++ ...++|+|+||||++|++....+..+.+.++||++|++|+|||||+|+|+..+.+.
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~~ 76 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGLEH 76 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECCCC-
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCcccc
Confidence 4678999999999876 45889999999999999865432222367899999999999999999999886543
No 67
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.00 E-value=2.2e-08 Score=96.75 Aligned_cols=272 Identities=16% Similarity=0.150 Sum_probs=134.3
Q ss_pred ceeecccccCCCCCCC-----C-----CChhH----HHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceee
Q 010547 99 GLIDVHAHLDDPGRTE-----W-----EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (507)
Q Consensus 99 GfID~H~H~~~~~~~~-----~-----~~~~~----~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (507)
||||+|+|+....... . ++... ....+.+.|||++++.+ +.........+.+..+......+..
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~--~~~~~~~~~~~~~la~~~~~~i~~~ 93 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVS--TFDIGRDVSLLAEVSRAADVHIVAA 93 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECC--CGGGTCCHHHHHHHHHHHTCEEECE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCC--CCCcCCCHHHHHHHHHHhCCcEEEE
Confidence 9999999997632221 1 11222 25667899999999875 1111223444444443322122233
Q ss_pred EEEeccccCC-----CcccH-HHHHHHHHcC-------CcEEEEcccCCCCCCCCCCCHHH---HHHHHHHHHhcCCcEE
Q 010547 165 VGFWGGLVPE-----NAYNA-SALEALLNAG-------VLGLKSFMCPSGINDFPMTNASH---IKEGLSVLARYKRPLL 228 (507)
Q Consensus 165 ~~~~~~~~~~-----~~~~~-~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~a~~~~~~v~ 228 (507)
++.+. ..+. ..+.. +.+.+....| +..++.-+ + +..++.+ +.+.++.|+++++++.
T Consensus 94 ~G~hp-~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGl-----d--~~~~~~q~~~f~~q~~lA~~~glPv~ 165 (330)
T 2ob3_A 94 TGLWF-DPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVAT-----T--GKATPFQELVLKAAARASLATGVPVT 165 (330)
T ss_dssp EECCS-CCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEEC-----S--SSCCHHHHHHHHHHHHHHHHHCCCEE
T ss_pred ecCCc-CCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeC-----C--CCCCHHHHHHHHHHHHHHHHhCCeEE
Confidence 33332 0011 11111 2223333221 22333322 1 1223443 7888999999999999
Q ss_pred EecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHH
Q 010547 229 VHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEA 308 (507)
Q Consensus 229 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~ 308 (507)
+|+.... ..+. +.++++++.+. ...++.+.|+... .+.+..+.+
T Consensus 166 iH~~~~~------------------------------r~a~-e~l~iL~~~g~----~~~~~~i~H~f~~-~~~e~a~~~ 209 (330)
T 2ob3_A 166 THTAASQ------------------------------RDGE-QQAAIFESEGL----SPSRVCIGHSDDT-DDLSYLTAL 209 (330)
T ss_dssp EECCGGG------------------------------THHH-HHHHHHHHTTC----CGGGEEECSGGGC-CCHHHHHHH
T ss_pred EECCCCC------------------------------CCHH-HHHHHHHHcCc----CcccEEEeCCCCC-CCHHHHHHH
Confidence 9994110 0122 44455554310 0124568899732 456888888
Q ss_pred HhCCCCEEEecccccccccccCCCCCCCc-eeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCC-CChh----hhccc
Q 010547 309 KTNGDSITVETCPHYLAFSAEEIPDGDTR-FKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSP-TVPE----LKLLD 380 (507)
Q Consensus 309 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~-~~~~----~~~~~ 380 (507)
.+.|..+.+..... ..+.. ..... ....-..........+.++++++ ..+.+.||..- .... .+..+
T Consensus 210 ~~~G~~i~~~~~G~-~tf~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~~ 284 (330)
T 2ob3_A 210 AARGYLIGLDHIPY-SAIGL----EDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVMD 284 (330)
T ss_dssp HHTTCEEEECCTTC-CCTTC----TTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHH
T ss_pred HhCCCEEEeCCCcc-ccccc----cccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCccc
Confidence 89998776642110 00000 00000 00000000113334577788888 56789999652 1110 00000
Q ss_pred cCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 381 EGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 381 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
.+.+. +....+........+.|++++++.+++|.||+++|+
T Consensus 285 ----~n~pn---~~~~~~~~~ia~l~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 285 ----RVNPD---GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp ----HHCTT---GGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHS
T ss_pred ----ccCCC---CcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 00000 111112233334445899999999999999999997
No 68
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.98 E-value=4.5e-08 Score=93.00 Aligned_cols=152 Identities=18% Similarity=0.192 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceE
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL 290 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 290 (507)
+.+.+.++.|+++++++.+|++.... . .+.++++++.+ ....++
T Consensus 138 ~~~~~~~~~a~~~~~pv~iH~~~~~~----------------------------~----~~~~~~l~~~~----~~~~~~ 181 (291)
T 1bf6_A 138 KVFIAAALAHNQTGRPISTHTSFSTM----------------------------G----LEQLALLQAHG----VDLSRV 181 (291)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGCS----------------------------H----HHHHHHHHHTT----CCGGGE
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCCC----------------------------h----HHHHHHHHHcC----CCchhE
Confidence 45788999999999999999943110 0 13445555431 113467
Q ss_pred EEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCC
Q 010547 291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSD 368 (507)
Q Consensus 291 ~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD 368 (507)
++.|+... .+.+.++.+.+.|..+.+..+.. . . .++ .......+.++++++ ..+.++||
T Consensus 182 ~i~H~~~~-~~~~~~~~~~~~G~~i~~~~~~~-~----------~-----~~~--~~~~~~~~~~~~~~~~~dril~~TD 242 (291)
T 1bf6_A 182 TVGHCDLK-DNLDNILKMIDLGAYVQFDTIGK-N----------S-----YYP--DEKRIAMLHALRDRGLLNRVMLSMD 242 (291)
T ss_dssp EECCCCSS-CCHHHHHHHHHTTCEEEECCTTC-T----------T-----TSC--HHHHHHHHHHHHHTTCGGGEEECCC
T ss_pred EEECCCCC-CCHHHHHHHHHCCCEEEEccCcc-c----------C-----CCC--HHHHHHHHHHHHHhCCCCeEEEcCC
Confidence 89999653 55678888888898776642210 0 0 011 223445677788887 45689999
Q ss_pred CCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 369 HSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
...... . ...++ .+....+..........|++.+++.++.|.||+++||
T Consensus 243 ~p~~~~-~---------~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 243 ITRRSH-L---------KANGG-YGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp CCSGGG-S---------GGGTS-CCTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHCC
T ss_pred CCCCcc-c---------hhcCC-CCHHHHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHhC
Confidence 753111 0 01112 2222223434444556789999999999999999985
No 69
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.86 E-value=1.8e-07 Score=87.23 Aligned_cols=241 Identities=17% Similarity=0.109 Sum_probs=126.5
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc---
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--- 176 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 176 (507)
+||+|+|+..... ..+.......+.+.||++++..+ +.+ ...+.+... ..... ++....|+.+...
T Consensus 5 ~iD~H~Hl~~~~~--~~~~~~~l~~~~~~Gv~~~v~~~--~~~--~~~~~~~~l---~~~~~--~~~~~~G~hP~~~~~~ 73 (259)
T 1zzm_A 5 FIDTHCHFDFPPF--SGDEEASLQRAAQAGVGKIIVPA--TEA--ENFARVLAL---AENYQ--PLYAALGLHPGMLEKH 73 (259)
T ss_dssp EEESCBCTTSTTT--TTCHHHHHHHHHHTTEEEEEEEC--CSG--GGHHHHHHH---HHHCT--TEEEEECCCGGGGGGC
T ss_pred EEEeeecCCchhh--ccCHHHHHHHHHHcCCCEEEEec--CCH--HHHHHHHHH---HHhCC--CeEEEEEecccccccC
Confidence 8999999987533 23466777888999999998763 222 223333222 22211 1222233433221
Q ss_pred --ccHHHHHHHHHc---CCcEEEEc-ccCCCCCCCC-CCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCC
Q 010547 177 --YNASALEALLNA---GVLGLKSF-MCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLD 249 (507)
Q Consensus 177 --~~~~~~~~~~~~---g~~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~ 249 (507)
...++++++... ++.+++.. +.. .....+ ....+.+...++.|+++++++.+|+....
T Consensus 74 ~~~~~~~l~~~~~~~~~~~~~iGEiGld~-~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~-------------- 138 (259)
T 1zzm_A 74 SDVSLEQLQQALERRPAKVVAVGEIGLDL-FGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH-------------- 138 (259)
T ss_dssp CHHHHHHHHHHHHHCCSSEEEEEEEEEEC-CSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCH--------------
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEEeccCC-CCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccH--------------
Confidence 234556555542 33444321 111 000000 11234688889999999999999994321
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccccc
Q 010547 250 TRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE 329 (507)
Q Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~ 329 (507)
..+++++++... ..++. .|+.+ ...+.++.+.+.|+.+.+. .. +.+
T Consensus 139 --------------------~~~~~il~~~~~-----~~~~i-~H~~~--g~~~~~~~~~~~g~~i~~~--g~-~~~--- 184 (259)
T 1zzm_A 139 --------------------DKLAMHLKRHDL-----PRTGV-VHGFS--GSLQQAERFVQLGYKIGVG--GT-ITY--- 184 (259)
T ss_dssp --------------------HHHHHHHHHHCC-----TTCEE-ETTCC--SCHHHHHHHHHTTCEEEEC--GG-GGC---
T ss_pred --------------------HHHHHHHHhcCC-----CCCEE-EEcCC--CCHHHHHHHHHCCCEEEEC--ce-eec---
Confidence 345555555411 12333 48876 3456677777778766542 11 000
Q ss_pred CCCCCCCceeEcCCCCChhhHHHHHHHHhc--CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HH
Q 010547 330 EIPDGDTRFKCAPPIRDAANKEKLWEALMD--GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GR 406 (507)
Q Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~--G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 406 (507)
+.... +.++++. --.+.++||+.-..... +. +.... ...+...... +.
T Consensus 185 ---------------~~~~~---~~~~~~~~~~dril~eTD~P~~~p~~-------~~---g~~~~-p~~l~~~~~~la~ 235 (259)
T 1zzm_A 185 ---------------PRASK---TRDVIAKLPLASLLLETDAPDMPLNG-------FQ---GQPNR-PEQAARVFAVLCE 235 (259)
T ss_dssp ---------------TTTCS---HHHHHHHSCGGGEEECCCBTSSCCTT-------CT---TSCCC-GGGHHHHHHHHHH
T ss_pred ---------------cccHH---HHHHHHhCCHHHEEEecCCCCccCCC-------CC---CCCCc-HHHHHHHHHHHHH
Confidence 00011 1222222 24578999965221110 00 00011 1113333333 35
Q ss_pred hcCCCHHHHHHHHhhchhHHhCC
Q 010547 407 KYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 407 ~~gls~~~al~~~T~n~A~~lgl 429 (507)
..|++.+++.+..|.|++++||+
T Consensus 236 ~~g~~~e~~~~~~~~Na~rl~~l 258 (259)
T 1zzm_A 236 LRREPADEIAQALLNNTYTLFNV 258 (259)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHCC
T ss_pred HHCcCHHHHHHHHHHHHHHHhCc
Confidence 57999999999999999999986
No 70
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.82 E-value=1.3e-07 Score=90.89 Aligned_cols=158 Identities=19% Similarity=0.235 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHhcCCcEEEecCC-cccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEM-EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
+.+++.++.|+++++++.+|+.. .. .. .+.++++++.+ ....+
T Consensus 151 ~~~~~~~~lA~~~~~pv~iH~~~~~~----------------------------~~----~~~~~~l~~~~----~~~~~ 194 (314)
T 2vc7_A 151 KVIRAAAIANKETKVPIITHSNAHNN----------------------------TG----LEQQRILTEEG----VDPGK 194 (314)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTTT----------------------------HH----HHHHHHHHHTT----CCGGG
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCccc----------------------------Ch----HHHHHHHHHcC----CCccc
Confidence 44777889999999999999941 00 01 24445555431 01235
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeC
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSS 367 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgt 367 (507)
+.+.|+... .+.+.++.+.+.|..+....+.. . .+ .........+.+.+..| -.+.++|
T Consensus 195 ~~i~H~~~~-~~~~~~~~~~~~G~~i~~~~~~~-~------------~~-----~~~~~~~~~i~~~~~~g~~drilleT 255 (314)
T 2vc7_A 195 ILIGHLGDT-DNIDYIKKIADKGSFIGLDRYGL-D------------LF-----LPVDKRNETTLRLIKDGYSDKIMISH 255 (314)
T ss_dssp EEETTGGGC-CCHHHHHHHHHTTCEEEECCTTC-T------------TT-----SCHHHHHHHHHHHHHTTCTTTEEECC
T ss_pred EEEECCCCC-CCHHHHHHHHHcCCEEEEeCCCc-c------------cC-----CCHHHHHHHHHHHHHcCCCCeEEEcC
Confidence 678898753 44677888888887766542110 0 00 00123334556666653 4569999
Q ss_pred CCCCCC-hhhhccccCCccccCCCCc--hhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 368 DHSPTV-PELKLLDEGNFLKAWGGIS--SLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 368 D~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
|..... .... .++... .+-. +....+..........|++.+++.++.|.|++++|+
T Consensus 256 D~~~~~~~~~~----~p~~~~-~g~~~~~~~~~~~~~~~~l~~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 256 DYCCTIDWGTA----KPEYKP-KLAPRWSITLIFEDTIPFLKRNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp CCBSSBCCGGG----CTTSHH-HHCTTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHTC
T ss_pred Ccccccccccc----chhhhh-cCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence 974211 0000 000000 0000 111123333344456789999999999999999885
No 71
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.76 E-value=1.4e-06 Score=81.67 Aligned_cols=235 Identities=15% Similarity=0.219 Sum_probs=126.6
Q ss_pred ceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC---
Q 010547 99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN--- 175 (507)
Q Consensus 99 GfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 175 (507)
++||+|+|+..... ..+.......+.+.||++++..+ +. ......+....+......... .|+.+..
T Consensus 5 ~~iD~H~Hl~~~~~--~~~~~~~l~~~~~~Gv~~~v~~~--~~--~~~~~~~~~l~~~~~~~i~~~----~GihP~~~~~ 74 (272)
T 2y1h_A 5 GLVDCHCHLSAPDF--DRDLDDVLEKAKKANVVALVAVA--EH--SGEFEKIMQLSERYNGFVLPC----LGVHPVQGLP 74 (272)
T ss_dssp CEEEEEECTTSGGG--TTTHHHHHHHHHHTTEEEEEECC--SS--GGGHHHHHHHHHHTTTTEEEE----ECCCSBC---
T ss_pred cEEEEeeCCCchhh--hcCHHHHHHHHHHCCCCEEEEeC--CC--HHHHHHHHHHHHHCCCCEEEE----EEECCCcccc
Confidence 59999999976432 23466777888999999999774 11 122333333332222122222 2333322
Q ss_pred --------cccHHHHHHHHH---cCCcEEEEcccCCCCCCCCC---------CCHHHHHHHHHHHHhcCCcEEEecCCcc
Q 010547 176 --------AYNASALEALLN---AGVLGLKSFMCPSGINDFPM---------TNASHIKEGLSVLARYKRPLLVHAEMEK 235 (507)
Q Consensus 176 --------~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 235 (507)
....+.+.++.. ..+.+++.. +. +..+. ...+.++..++.|+++++|+.+|+....
T Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~iGE~-Gl---d~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~ 150 (272)
T 2y1h_A 75 PEDQRSVTLKDLDVALPIIENYKDRLLAIGEV-GL---DFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAG 150 (272)
T ss_dssp ----CBCCHHHHHHHHHHHHHHGGGCSEEEEE-EC---CCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCH
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCEEEEEec-cC---CCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcH
Confidence 122344444443 233444432 11 11111 1234688899999999999999995321
Q ss_pred cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCE
Q 010547 236 GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSI 315 (507)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i 315 (507)
..+++++++. +..++.+ |+.+ ...+.++.+.+.|+.+
T Consensus 151 ----------------------------------~~~~~il~~~------~~~~~v~-H~~~--g~~~~~~~~~~~g~~i 187 (272)
T 2y1h_A 151 ----------------------------------RPTINLLQEQ------GAEKVLL-HAFD--GRPSVAMEGVRAGYFF 187 (272)
T ss_dssp ----------------------------------HHHHHHHHHT------TCCSEEE-ETCC--SCHHHHHHHHHTTCEE
T ss_pred ----------------------------------HHHHHHHHhC------CCCCEEE-EccC--CCHHHHHHHHHCCCEE
Confidence 2344555553 1234555 8765 3456777777788765
Q ss_pred EEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCch
Q 010547 316 TVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393 (507)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (507)
... +... ... .+.+.+... -.+.++||........ +-..
T Consensus 188 ~~~--g~~~--------------------~~~----~~~~~~~~~~~drll~eTD~P~~~p~~-------------g~~~ 228 (272)
T 2y1h_A 188 SIP--PSII--------------------RSG----QKQKLVKQLPLTSICLETDSPALGPEK-------------QVRN 228 (272)
T ss_dssp EEC--GGGG--------------------TCH----HHHHHHHHSCGGGEEECCCTTSSCSST-------------TSCC
T ss_pred EEC--Cccc--------------------CcH----HHHHHHHhCCHHHEEEecCCCCCCCCC-------------CCcC
Confidence 542 2100 011 223333332 3458999975221110 0000
Q ss_pred hhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 394 LQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 394 ~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
....+...... +...|++.+++.+..+.|++++|++
T Consensus 229 ~p~~l~~~~~~la~~~g~~~e~~~~~~~~N~~~l~~~ 265 (272)
T 2y1h_A 229 EPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFPK 265 (272)
T ss_dssp CGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHSTT
T ss_pred cHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHh
Confidence 00113333333 3446999999999999999999998
No 72
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.71 E-value=1.1e-06 Score=82.10 Aligned_cols=241 Identities=19% Similarity=0.219 Sum_probs=129.9
Q ss_pred eeecccccCCCCCCC-CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcc-
Q 010547 100 LIDVHAHLDDPGRTE-WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY- 177 (507)
Q Consensus 100 fID~H~H~~~~~~~~-~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (507)
+||+|+|+....... ..+.......+.+.||++++... + .........+...... ++....++.+....
T Consensus 3 ~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~--~-----~~~~~~~~~~~~~~~p--~~~~~~g~hP~~~~~ 73 (265)
T 1yix_A 3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA--T-----TLPSYLHMRDLVGERD--NVVFSCGVHPLNQND 73 (265)
T ss_dssp EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECC--S-----SHHHHHHHHHHHCSCT--TEEEEECCCTTCCSS
T ss_pred EEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeC--C-----CHHHHHHHHHHHHHCC--CeEEEEEeCCCcccc
Confidence 899999998654311 24567777888899999988653 1 2334444444443322 23333445443221
Q ss_pred --cHHHHHHHHHc------CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCC
Q 010547 178 --NASALEALLNA------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLD 249 (507)
Q Consensus 178 --~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~ 249 (507)
..++++++... |..|++.+... .......+.+...++.|+++++++.+|+...
T Consensus 74 ~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~----~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~--------------- 134 (265)
T 1yix_A 74 PYDVEDLRRLAAEEGVVALGETGLDYYYTP----ETKVRQQESFIHHIQIGRELNKPVIVHTRDA--------------- 134 (265)
T ss_dssp CCCHHHHHHHHTSTTEEEEEEEEEECTTCS----SCHHHHHHHHHHHHHHHHHHTCCEEEEEESC---------------
T ss_pred cchHHHHHHHhccCCeEEEEccccCCCcCC----CChHHHHHHHHHHHHHHHHhCCCEEEEecCc---------------
Confidence 35677766643 23334332110 0011234568889999999999999998421
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccccc
Q 010547 250 TRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE 329 (507)
Q Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~ 329 (507)
...+++++++.+ .+..++.+ |+.. ...+.++.+.+.|+-+.. +.. +.+
T Consensus 135 -------------------~~~~~~~l~~~~----~p~~~~v~-H~~~--~~~~~~~~~~~~g~~~~~--sg~-~~~--- 182 (265)
T 1yix_A 135 -------------------RADTLAILREEK----VTDCGGVL-HCFT--EDRETAGKLLDLGFYISF--SGI-VTF--- 182 (265)
T ss_dssp -------------------HHHHHHHHHHTT----GGGTCEEE-TTCC--SCHHHHHHHHTTTCEEEE--CGG-GGS---
T ss_pred -------------------hHHHHHHHHhcC----CCCCCEEE-EcCC--CCHHHHHHHHHCCcEEEE--CCc-ccc---
Confidence 123444444421 01334444 8865 334566666666655443 221 000
Q ss_pred CCCCCCCceeEcCCCCChhhHHHHHHHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh
Q 010547 330 EIPDGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK 407 (507)
Q Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 407 (507)
... ..+.++++. + -.+.++||+....... +. |-......+........+
T Consensus 183 ---------------~~~---~~~~~~~~~~~~drll~~TD~P~~~~~~-------~~----g~~~~~~~l~~~~~~l~~ 233 (265)
T 1yix_A 183 ---------------RNA---EQLRDAARYVPLDRLLVETDSPYLAPVP-------HR----GKENQPAMVRDVAEYMAV 233 (265)
T ss_dssp ---------------TTC---HHHHHHHHHSCGGGEEECCCBTSCCCTT-------CT----TSCCCGGGHHHHHHHHHH
T ss_pred ---------------Cch---HHHHHHHHhCChHHEEEecCCCCCCCcc-------cC----CCCCchHHHHHHHHHHHH
Confidence 011 122333333 3 4578999975322110 00 000011123333444433
Q ss_pred -cCCCHHHHHHHHhhchhHHhCC
Q 010547 408 -YGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 408 -~gls~~~al~~~T~n~A~~lgl 429 (507)
.+++.+++.++.+.|+++++|+
T Consensus 234 ~~~~~~~~~~~i~~~Na~rl~~l 256 (265)
T 1yix_A 234 LKGVAVEELAQVTTDNFARLFHI 256 (265)
T ss_dssp HHTSCHHHHHHHHHHHHHHHTTC
T ss_pred HhCcCHHHHHHHHHHHHHHHhCc
Confidence 6899999999999999999998
No 73
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.66 E-value=8e-07 Score=83.46 Aligned_cols=251 Identities=16% Similarity=0.117 Sum_probs=134.8
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCce--eeEEEeccccCCC--
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY--VDVGFWGGLVPEN-- 175 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-- 175 (507)
|||+|+|+....+ .++.......+.+.||..++..+ .+.+......+.+..... ..+....|+.+..
T Consensus 3 ~iD~H~HL~~~~~--~~d~~~vl~~a~~~gV~~~v~~g-------~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~ 73 (287)
T 3rcm_A 3 LIDIGVNLTNSSF--HDQQAAIVERALEAGVTQMLLTG-------TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAK 73 (287)
T ss_dssp EEEEEECTTCGGG--TTCHHHHHHHHHHTTEEEEEECC-------CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGG
T ss_pred eEEEeecCCchhc--ccCHHHHHHHHHHcCCeEEEEec-------CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccc
Confidence 8999999986433 24577788889999999988653 233444444333332110 1122223343322
Q ss_pred ---cccHHHHHHHHHc-CCcEEEEc-ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCc
Q 010547 176 ---AYNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 250 (507)
Q Consensus 176 ---~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 250 (507)
+...+.++++.+. .+.+++.. +.+...........+.+.+.++.|+++++++.+|+....
T Consensus 74 ~~~~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a~--------------- 138 (287)
T 3rcm_A 74 AWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDAS--------------- 138 (287)
T ss_dssp GCCTTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH---------------
T ss_pred cCCHHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCcH---------------
Confidence 2345666666653 34444432 111000000011245688899999999999999995421
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccC
Q 010547 251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 330 (507)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~ 330 (507)
.++++++++.... ..+. +.|+.+ ++.+.++.+.+.|.-+++.-. +.+.
T Consensus 139 -------------------~~~l~il~~~~~~----~~~~-V~H~fs--G~~e~a~~~l~~G~yis~~g~---i~~~--- 186 (287)
T 3rcm_A 139 -------------------ERLLAILKDYRDH----LTGA-VVHCFT--GEREALFAYLDLDLHIGITGW---ICDE--- 186 (287)
T ss_dssp -------------------HHHHHHHHTTGGG----CSCE-EECSCC--CCHHHHHHHHHTTCEEEECGG---GGCT---
T ss_pred -------------------HHHHHHHHHcCCC----CCeE-EEEeCC--CCHHHHHHHHHCCcEEEECch---hccc---
Confidence 4556666653110 1123 458876 567777888888876665310 0000
Q ss_pred CCCCCCceeEcCCCCChhhHHHHHHHHhc--CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHh
Q 010547 331 IPDGDTRFKCAPPIRDAANKEKLWEALMD--GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRK 407 (507)
Q Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~--G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 407 (507)
+... .+.+.++. --.+.+.||..-..... +.....|-..-...+...... +..
T Consensus 187 --------------k~~~---~l~~~v~~ip~drlLlETD~P~l~p~~-------~~~~~rg~~n~P~~l~~v~~~lA~~ 242 (287)
T 3rcm_A 187 --------------RRGT---HLHPLVGNIPEGRLMLESDAPYLLPRS-------LRPKPKSGRNEPAFLPEVLREVALH 242 (287)
T ss_dssp --------------TTCG---GGHHHHTTSCTTSEEECCCTTSCCCTT-------CSSCCTTCCCCGGGHHHHHHHHHHH
T ss_pred --------------cCHH---HHHHHHHhcCCccEEEeccCCccCccc-------cccccCCCcCCHHHHHHHHHHHHHH
Confidence 0001 11222332 13468999964222110 000000111111224444444 356
Q ss_pred cCCCHHHHHHHHhhchhHHhCCC
Q 010547 408 YGVTLEQLASWWSERPAKLAGQV 430 (507)
Q Consensus 408 ~gls~~~al~~~T~n~A~~lgl~ 430 (507)
.|++++++.+.+|.|+.++||++
T Consensus 243 ~g~s~eev~~~~~~N~~rlf~l~ 265 (287)
T 3rcm_A 243 RGESAEHTAAHTTATARDFFQLP 265 (287)
T ss_dssp HTSCHHHHHHHHHHHHHHHTTCC
T ss_pred hCcCHHHHHHHHHHHHHHHHCCC
Confidence 79999999999999999999983
No 74
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.66 E-value=2.1e-06 Score=80.16 Aligned_cols=247 Identities=14% Similarity=0.066 Sum_probs=128.0
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc---
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--- 176 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 176 (507)
+||+|+|+..... ..+.......+.+.||++++... + .........+.+..... +....|+.+...
T Consensus 5 ~iD~H~Hl~~~~~--~~~~~~~l~~~~~~Gv~~~v~~~--~-----~~~~~~~~~~l~~~~~~--i~~~~G~hP~~~~~~ 73 (264)
T 1xwy_A 5 MFDIGVNLTSSQF--AKDRDDVVACAFDAGVNGLLITG--T-----NLRESQQAQKLARQYSS--CWSTAGVHPHDSSQW 73 (264)
T ss_dssp CEEEEECTTSGGG--TTTHHHHHHHHHHTTCCEEEECC--C-----SHHHHHHHHHHHHHSTT--EEEEECCCGGGGGGC
T ss_pred EEEEeeCCCChhh--ccCHHHHHHHHHHCCCCEEEEeC--C-----CHHHHHHHHHHHHhCCC--EEEEEEECCcccccC
Confidence 8999999976432 13466777788999999998764 1 13334444443332221 222233433221
Q ss_pred --ccHHHHHHHHHc-CCcEEEEc-ccCCCCCCCC-CCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcc
Q 010547 177 --YNASALEALLNA-GVLGLKSF-MCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (507)
Q Consensus 177 --~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 251 (507)
...++++++... +..+++.. +.+. ....+ ....+.+.+.++.|+++++++.+|+...
T Consensus 74 ~~~~~~~l~~~~~~~~~~~iGE~Gld~~-~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a----------------- 135 (264)
T 1xwy_A 74 QAATEEAIIELAAQPEVVAIGECGLDFN-RNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDA----------------- 135 (264)
T ss_dssp CHHHHHHHHHHHTSTTEEEEEEEEEETT-TCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC-----------------
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeccCCC-CCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCc-----------------
Confidence 233455555543 33344321 1110 00000 0112458889999999999999998421
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCC
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI 331 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~ 331 (507)
...+++++++... ...++.+ |+.+ ...+.++.+.+.|+-+... .. +.
T Consensus 136 -----------------~~~~~~il~~~~~----~~~~~v~-H~~~--g~~~~~~~~~~~g~yi~~~--g~-~~------ 182 (264)
T 1xwy_A 136 -----------------HERFMTLLEPWLD----KLPGAVL-HCFT--GTREEMQACVAHGIYIGIT--GW-VC------ 182 (264)
T ss_dssp -----------------HHHHHHHHGGGGG----GSSCEEE-CSCC--CCHHHHHHHHHTTCEEEEC--GG-GG------
T ss_pred -----------------hHHHHHHHHhcCC----CCCcEEE-EccC--CCHHHHHHHHHCCeEEEEC--cc-cc------
Confidence 1344555555321 0223433 8765 3456667777777665543 10 00
Q ss_pred CCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhc
Q 010547 332 PDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKY 408 (507)
Q Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 408 (507)
.... ...+.+.++.. -.+.++||+.-..... ... .+ .|-......+...... +...
T Consensus 183 -----------~~~~---~~~l~~~~~~~~~drll~eTD~P~~~~~~-~~~--~~----~g~~n~p~~~~~~~~~~a~~~ 241 (264)
T 1xwy_A 183 -----------DERR---GLELRELLPLIPAEKLLIETDAPYLLPRD-LTP--KP----SSRRNEPAHLPHILQRIAHWR 241 (264)
T ss_dssp -----------CTTT---SHHHHHHGGGSCGGGEEECCCTTSCCCTT-CTT--CC----CSSCCCGGGHHHHHHHHHHHH
T ss_pred -----------CCcC---cHHHHHHHHhCCHHHEEEecCCCCcCccc-ccc--cc----CCCCCchHHHHHHHHHHHHHH
Confidence 0000 11233444432 3578999975322110 000 00 0000001113333333 3456
Q ss_pred CCCHHHHHHHHhhchhHHhCC
Q 010547 409 GVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 409 gls~~~al~~~T~n~A~~lgl 429 (507)
|+|.+++.+..+.|+++++|+
T Consensus 242 g~~~e~~~~~~~~Na~rl~~l 262 (264)
T 1xwy_A 242 GEDAAWLAATTDANVKTLFGI 262 (264)
T ss_dssp TCCHHHHHHHHHHHHHHHHCC
T ss_pred CcCHHHHHHHHHHHHHHHhCc
Confidence 899999999999999999987
No 75
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.53 E-value=3.1e-06 Score=80.57 Aligned_cols=258 Identities=15% Similarity=0.065 Sum_probs=131.4
Q ss_pred ceeecccccCCCCCCC--------CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEecc
Q 010547 99 GLIDVHAHLDDPGRTE--------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170 (507)
Q Consensus 99 GfID~H~H~~~~~~~~--------~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (507)
.+||+|+|+....... ..+.......+.+.||++++..+ ...+......+.++... ++....|
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~-------~~~~~~~~~~~la~~~~--~v~~~~G 72 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITG-------GNLQDSKDALHLAQTNG--MFFSTVG 72 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECC-------CSHHHHHHHHHHHTTCT--TEEEEEC
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeC-------CCHHHHHHHHHHHHHCC--CEEEEEE
Confidence 5899999997653321 14566777888899999999764 12444455544444322 2333344
Q ss_pred ccCCCc---------ccHHHHHHHHHc---CCcEEEEc-ccCCCCCCCC--CCCHHHHHHHHHHHHhcCCcEEEecCCcc
Q 010547 171 LVPENA---------YNASALEALLNA---GVLGLKSF-MCPSGINDFP--MTNASHIKEGLSVLARYKRPLLVHAEMEK 235 (507)
Q Consensus 171 ~~~~~~---------~~~~~~~~~~~~---g~~~~~~~-~~~~~~~~~~--~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 235 (507)
+.+... ...++++++... .+.+++.. +.+. ..... ....+.+++.++.|+++++|+.+|+.+..
T Consensus 73 iHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~-~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~a~ 151 (301)
T 2xio_A 73 CHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFD-RLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSH 151 (301)
T ss_dssp CCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETT-CTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESCH
T ss_pred ECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCC-cCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecCch
Confidence 544322 123455555543 23344331 1110 00000 11225678889999999999999994321
Q ss_pred cchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCE
Q 010547 236 GSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSI 315 (507)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i 315 (507)
..+++++++... .....+.|+.+ .+.+.++.+.+.|+-+
T Consensus 152 ----------------------------------~~~~~il~~~~~-----~~~~~i~H~f~--g~~~~~~~~l~~g~yi 190 (301)
T 2xio_A 152 ----------------------------------AEFLDITKRNRD-----RCVGGVVHSFD--GTKEAAAALIDLDLYI 190 (301)
T ss_dssp ----------------------------------HHHHHHHHHTGG-----GSSCEEETTCC--CCHHHHHHHHHTTCEE
T ss_pred ----------------------------------HHHHHHHHhccC-----CCCcEEEEccC--CCHHHHHHHHhcCcEE
Confidence 344455554311 11123578876 4566777777788766
Q ss_pred EEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhh-----hccc------cC
Q 010547 316 TVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPEL-----KLLD------EG 382 (507)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~-----~~~~------~~ 382 (507)
.+..+ . ++.... .+.++.. -.+.++||..-..... +.+. ..
T Consensus 191 ~~~g~----~------------------~~~~~~----~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~ 244 (301)
T 2xio_A 191 GFNGC----S------------------LKTEAN----LEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKK 244 (301)
T ss_dssp EECGG----G------------------SSSHHH----HHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESS
T ss_pred EEccc----c------------------cCChHH----HHHHHhCChHHEEEecCCCcccccccccccccccccCccccc
Confidence 55311 0 001111 2334332 3568999965221000 0000 00
Q ss_pred Ccccc-CCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCc
Q 010547 383 NFLKA-WGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGA 434 (507)
Q Consensus 383 ~~~~~-~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl~~~G~ 434 (507)
.+... ..+-.. ...+...... +.-.|++.+++.+..+.|++++|+++.+|.
T Consensus 245 ~~~g~~~~~~n~-p~~v~~~~~~ia~l~g~~~e~~~~~~~~Na~rlf~~~~~~~ 297 (301)
T 2xio_A 245 WESGHCLKDRNE-PCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPVIAEN 297 (301)
T ss_dssp CCTTSEETTCCC-GGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCCC----
T ss_pred ccccccCCCCCC-hHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCchhhhh
Confidence 00000 000000 1112233333 233589999999999999999999844453
No 76
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.45 E-value=1.8e-05 Score=75.03 Aligned_cols=251 Identities=12% Similarity=0.056 Sum_probs=137.6
Q ss_pred EecceeecccccCCCCCCC----------CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeE
Q 010547 96 IMPGLIDVHAHLDDPGRTE----------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165 (507)
Q Consensus 96 v~PGfID~H~H~~~~~~~~----------~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 165 (507)
+=|++||+|+|+....+.. ..+.......+-+.||..++... ........+.+.+..+....+ +
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~--~~~~~~~n~~~~~~~~~~p~r----~ 96 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQ--PSFLGTNNQAMLNAIQQYPDR----L 96 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEEC--CGGGTTCCHHHHHHHHHSTTT----E
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEec--CcccccchHHHHHHHHHCCCe----E
Confidence 4457899999998643210 23466777788899999988653 111112222233333222222 1
Q ss_pred EEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhccc
Q 010547 166 GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (507)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 245 (507)
....++.+. ...++++++.+.|..|++..... ...+....+.+...++.++++|+++.+|+...
T Consensus 97 ~g~~~v~P~--~~~~eL~~l~~~gv~Gi~l~~~~---~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~----------- 160 (294)
T 4i6k_A 97 KGIAVVQHT--TTFNELVNLKAQGIVGVRLNLFG---LNLPALNTPDWQKFLRNVESLNWQVELHAPPK----------- 160 (294)
T ss_dssp EEEECCCTT--CCHHHHHHHHTTTEEEEEEECTT---SCCCCSSSHHHHHHHHHHHHTTCEEEEECCHH-----------
T ss_pred EEEEEeCCc--ccHHHHHHHHHCCCcEEEeccCC---CCCCCcccHHHHHHHHHHHHcCCEEEEeeCcc-----------
Confidence 222233332 23467788888899999864321 11223466899999999999999999999321
Q ss_pred CcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh-------HHHHHHHHHHhCCCCEEEe
Q 010547 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-------SSLDLLMEAKTNGDSITVE 318 (507)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~-------~~~~~i~~~~~~g~~i~~~ 318 (507)
.+..+.+++++. ..++.+.|+.... ...+.+..+.+. -++.+.
T Consensus 161 ----------------------~l~~~~~~l~~~-------p~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~-~nv~~k 210 (294)
T 4i6k_A 161 ----------------------YLVQLLPQLNEY-------SFDVVIDHFGRVDPVKGIEDPDYQKFLSLLNV-KQHWIK 210 (294)
T ss_dssp ----------------------HHHHHHHHHTTS-------SSCEEESGGGCCCTTTCTTCHHHHHHHHHCCT-TTEEEE
T ss_pred ----------------------hHHHHHHHHHHC-------CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhC-CCEEEE
Confidence 134555666653 3678889997521 133444444322 134443
Q ss_pred cccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhh
Q 010547 319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF 396 (507)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (507)
++.-.. .. ..+ .| .......+.+.+.. | -++.+|||+....... ...
T Consensus 211 ~Sg~~~-~~-----~~~-----~~---~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~--------------~~~--- 259 (294)
T 4i6k_A 211 VSGFYR-LG-----ATP-----SN---INIAQQAYNIFKEKGFLHKLIWGSDWPHTQHES--------------LIT--- 259 (294)
T ss_dssp CCCGGG-SS-----STT-----HH---HHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTT--------------TCC---
T ss_pred eccccc-cc-----ccC-----CC---chhhHHHHHHHHHHhCcccEEEeCCCCCCCCcC--------------CCC---
Confidence 332100 00 000 00 01112334444432 3 3578999976443210 000
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCC
Q 010547 397 VLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQV 430 (507)
Q Consensus 397 ~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~ 430 (507)
+...+....+.+++.++.-+..+.|+++++|++
T Consensus 260 -y~~~~~~l~~~~~~~~~~~~i~~~NA~rl~~l~ 292 (294)
T 4i6k_A 260 -YEDAIKAFKQIVFDKHEQCLILNQNPTELFGFS 292 (294)
T ss_dssp -HHHHHHHHHHHCCCHHHHHHHHTHHHHHHHTC-
T ss_pred -HHHHHHHHHHHCCCHHHHHHHHHHCHHHHhCCC
Confidence 222334444556899999999999999999983
No 77
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.44 E-value=1e-05 Score=74.25 Aligned_cols=232 Identities=18% Similarity=0.138 Sum_probs=128.0
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCC----C
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE----N 175 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 175 (507)
+||+|+|+... ++.......+.+.||..+.. + + +.+......+.+.... .+....|+.+. .
T Consensus 3 liDtH~HL~~~-----~d~~~vl~~a~~~gV~~i~v-~--~-----~~~~~~~~~~la~~~~--~v~~~~GiHP~~~~~~ 67 (254)
T 3gg7_A 3 LIDFHVHLDLY-----PDPVAVARACEERQLTVLSV-T--T-----TPAAWRGTLALAAGRP--HVWTALGFHPEVVSER 67 (254)
T ss_dssp CEEEEECGGGS-----SSHHHHHHHHHHTTCEEEEC-C--S-----SGGGHHHHHGGGTTCT--TEEECBCCCGGGTTTT
T ss_pred eEEEeeCCCCC-----CCHHHHHHHHHHCCCcEEEe-c--C-----CHHHHHHHHHHHHhCC--CeEEEEeeCccccccc
Confidence 89999999853 24667778888999998662 2 2 2333344444333221 23333344432 2
Q ss_pred cccHHHHHHHHHcCCcEEEEcccCCCCCCCCC------CCHHHHHHHHHHHHhcCCcEE-EecCCcccchhhhhcccCcC
Q 010547 176 AYNASALEALLNAGVLGLKSFMCPSGINDFPM------TNASHIKEGLSVLARYKRPLL-VHAEMEKGSERHVKLEDDTL 248 (507)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~a~~~~~~v~-~H~~~~~~~~~~~~~~~~~~ 248 (507)
....+.+.++... ..+++.. +- +..+. ...+.+++.+++|++++.|+. +|+....
T Consensus 68 ~~~l~~l~~~~~~-~vaIGEi-GL---D~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~------------- 129 (254)
T 3gg7_A 68 AADLPWFDRYLPE-TRFVGEV-GL---DGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAE------------- 129 (254)
T ss_dssp GGGTHHHHHHGGG-CSEEEEE-EC---CCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCH-------------
T ss_pred HHHHHHHHHHhhh-ccEEEEE-ec---CCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcH-------------
Confidence 2344555555532 3344331 00 11111 123457888999999999998 9995421
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccc
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~ 328 (507)
.++++++++.. .....+.|+.+ ++.+.++.+.+.|..+++....
T Consensus 130 ---------------------~~~~~il~~~~------~~~~~v~H~fs--G~~e~a~~~l~~G~yis~~g~~------- 173 (254)
T 3gg7_A 130 ---------------------SEVLNCLEANP------RSGTPILHWYS--GSVTELRRAISLGCWFSVGPTM------- 173 (254)
T ss_dssp ---------------------HHHHHHHHHCG------GGEEEEEETCC--SCHHHHHHHHHTTCEEEECHHH-------
T ss_pred ---------------------HHHHHHHHHcC------CCCcEEEEeCC--CCHHHHHHHHcCCcEEEECccc-------
Confidence 35566666531 11123558877 5677788888888776653210
Q ss_pred cCCCCCCCceeEcCCCCChhhHHHHHHHHhcC--CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-H
Q 010547 329 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-G 405 (507)
Q Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G--~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 405 (507)
. +.. .+.+.++.- -.+.+.||.+ +.... |-..-...+...... +
T Consensus 174 ----------~-----~~~----~~~~~v~~ip~drlLlETD~P-~~~~r-------------g~~n~P~~v~~v~~~iA 220 (254)
T 3gg7_A 174 ----------V-----RTQ----KGAALIRSMPRDRVLTETDGP-FLELD-------------GQAALPWDVKSVVEGLS 220 (254)
T ss_dssp ----------H-----TSH----HHHHHHHHSCGGGEEECCCTT-TSEET-------------TEECCGGGHHHHHHHHH
T ss_pred ----------C-----chH----HHHHHHHHcCCCeEEEeCCCC-ccccC-------------CCCCCHHHHHHHHHHHH
Confidence 0 011 122222221 2468999964 32110 000111113333333 4
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCCCCCC
Q 010547 406 RKYGVTLEQLASWWSERPAKLAGQVSKG 433 (507)
Q Consensus 406 ~~~gls~~~al~~~T~n~A~~lgl~~~G 433 (507)
.-.|++.+++.+..+.|+.++|++.+-|
T Consensus 221 ~~~g~~~ee~~~~~~~N~~~lf~~~~~~ 248 (254)
T 3gg7_A 221 KIWQIPASEVERIVKENVSRLLGTVREG 248 (254)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHC----
T ss_pred HHhCcCHHHHHHHHHHHHHHHHCCCccc
Confidence 5568999999999999999999985444
No 78
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.43 E-value=1.6e-05 Score=76.98 Aligned_cols=175 Identities=15% Similarity=0.095 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 210 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
...+++.++.|++.++|+.+|+..... +. +.++++++.+. +..+
T Consensus 168 ~~~f~aq~~~A~e~glPViiH~r~gr~-------------------------------a~-d~l~iL~e~g~----~~~~ 211 (363)
T 3ovg_A 168 LKALEVAARTSILTGCPILVHTQLGTM-------------------------------AL-EVAKHLIGFGA----NPDK 211 (363)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEETTCS-------------------------------HH-HHHHHHHHHTC----CGGG
T ss_pred HHHHHHHHHHHHHhCCEEEEeCCCCCC-------------------------------HH-HHHHHHHhcCC----CCCc
Confidence 345788899999999999999843211 12 34455555311 1235
Q ss_pred EEEEecCChhHHHHHHHHHH-hCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEe
Q 010547 290 LHIVHLSDASSSLDLLMEAK-TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLS 366 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~-~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lg 366 (507)
+.+.|+... ...+..+++. +.|..+.+.... .+...| .......+.++++++. .+.+.
T Consensus 212 vvi~H~~~~-~~~~~a~~~l~~~G~yI~f~g~~---------------~~~~~~---~~~ra~~l~~lv~~~p~drILle 272 (363)
T 3ovg_A 212 IQISHLNKN-PDKYYYEKVIKETGVTLCFDGPD---------------RVKYYP---DSLLAENIKYLVDKGLQKHITLS 272 (363)
T ss_dssp EEEECGGGS-CCHHHHHHHHHHHCCEEEECCTT---------------CTTTCC---HHHHHHHHHHHHHTTCGGGEEEC
T ss_pred EEEEcCCCC-CCHHHHHHHHHHCCcEEEECCee---------------ccccCC---hhHHHHHHHHHHHhcCCCeEEEe
Confidence 778899853 4455566666 778766654210 000000 1223455677777764 47999
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCCcEE
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLV 444 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~~~G~I~~G~~ADlv 444 (507)
||.... ......+ .. ......+...........+...|++.+++.++.|.||+++|+++..+++.+|+.-+-|
T Consensus 273 TDap~~-~~l~~~G--~~--~g~~~n~p~~l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l~~~~~~~~~~~~~~~ 345 (363)
T 3ovg_A 273 LDAGRI-LYQRNYG--LT--KGKQTFGLAYLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAFDEKRNFDPLKVSKEV 345 (363)
T ss_dssp CCCCSG-GGSHHHH--HH--TTEECCCTHHHHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSCCCCCCCCGGGSCHHH
T ss_pred CCCCCC-cCCCCCC--cc--CCCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCCCcCccCcccCCHHH
Confidence 996522 1110000 00 0000012222233344456678999999999999999999999777999999976543
No 79
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.36 E-value=3e-05 Score=75.24 Aligned_cols=161 Identities=16% Similarity=0.149 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhc-CCcEEEec-CCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhh-ccCCCCCC
Q 010547 211 SHIKEGLSVLARY-KRPLLVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT-RTDGPAEG 287 (507)
Q Consensus 211 ~~l~~~~~~a~~~-~~~v~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~~~g 287 (507)
..+++.++.|++. |++|.+|+ ..... ..+.++++++. +. ..
T Consensus 179 ~~f~aq~~~A~~~~glPV~iH~~r~~~a--------------------------------~~e~l~iL~e~~~~----~~ 222 (365)
T 3rhg_A 179 NSLRAAALAQNNNPYASMNIHMPGWQRR--------------------------------GDEVLDILLTEMGC----DP 222 (365)
T ss_dssp HHHHHHHHHHTTCTTCEEEEECCTTSCC--------------------------------HHHHHHHHTTTTCC----CG
T ss_pred HHHHHHHHHHHHhcCCcEEEECCCCCcC--------------------------------HHHHHHHHHhccCC----CC
Confidence 4577888999999 99999997 42111 13445555542 11 12
Q ss_pred ceEEEEecC-ChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeE
Q 010547 288 AHLHIVHLS-DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDM 364 (507)
Q Consensus 288 ~~~~~~h~~-~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~ 364 (507)
.++.+.|+. +. ...+..+++.+.|..+.+....... .++..+ . .| .+......+.+++++|. .+.
T Consensus 223 ~~vvi~H~~rs~-~~~e~a~~~l~~G~~I~~~g~g~~~-----tf~~~~--~--~~--~d~~~a~~l~~li~~g~~dril 290 (365)
T 3rhg_A 223 AKISLAHSDPSG-KDIDYQCKMLDRGVWLEFDMIGLDI-----SFPKEG--A--AP--SVMDTVEAVATLIERGYGNQIV 290 (365)
T ss_dssp GGEEESCCGGGT-TCHHHHHHHHHTTCEEEECCTTCCC-----BCSSSC--B--CC--CHHHHHHHHHHHHHTTCGGGEE
T ss_pred CceEEecCCCCC-CCHHHHHHHHhCCCEEEecCCCccc-----cccccc--c--cc--chHHHHHHHHHHHHhCCCCcEE
Confidence 347778998 43 5678888888899877664210000 010000 0 00 02234456777787774 578
Q ss_pred EeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCC
Q 010547 365 LSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQV 430 (507)
Q Consensus 365 lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~ 430 (507)
+.||....... . ..++ .+....+......+...|++.+++.++.|.||+++|+++
T Consensus 291 leTD~p~l~~~-~---------~~G~-~~~~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~l~ 345 (365)
T 3rhg_A 291 LSHDVFLKQMW-A---------KNGG-NGWGFVPNVFLSLLAQRGIDKTIIDKLCIDNPANLLAAE 345 (365)
T ss_dssp ECCCCCSGGGS-G---------GGTS-CTTTHHHHTHHHHHHHTTCCHHHHHHHTTHHHHHHHHSC
T ss_pred EeCCCCCCCCC-C---------cCCC-CCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCC
Confidence 99996532211 1 1112 333343444455567889999999999999999999983
No 80
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.32 E-value=6e-05 Score=73.15 Aligned_cols=162 Identities=15% Similarity=0.155 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHhcCCcEEEecCC-cccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEM-EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
..+++.++.|++.|+++.+|+.. ... ..+.++++++.+. ...+
T Consensus 190 ~~f~aq~~~A~~~glPV~iH~~gr~~a--------------------------------~~e~l~iL~e~g~----~~~~ 233 (364)
T 3k2g_A 190 KSLRGAARAQVRTGLPLMVHLPGWFRL--------------------------------AHRVLDLVEEEGA----DLRH 233 (364)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTSCC--------------------------------HHHHHHHHHHTTC----CGGG
T ss_pred HHHHHHHHHHHHHCCeEEEecCCCCcc--------------------------------HHHHHHHHHHcCC----CCCc
Confidence 45778889999999999999831 110 1344455555311 1234
Q ss_pred EEEEecCChhH-HHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEe
Q 010547 290 LHIVHLSDASS-SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLS 366 (507)
Q Consensus 290 ~~~~h~~~~~~-~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lg 366 (507)
+.+.|+... . +.+..+++.+.|..+.+........ ++.. .+ ..| .+......+.+++++|. .+.+.
T Consensus 234 vvi~H~~~s-~~~~e~a~~~l~~G~~I~f~g~gt~~~-----f~~~--~~-~~~--~d~~ra~~l~~lv~~gp~drille 302 (364)
T 3k2g_A 234 TVLCHMNPS-HMDPVYQATLAQRGAFLEFDMIGMDFF-----YADQ--GV-QCP--SDDEVARAILGLADHGYLDRILLS 302 (364)
T ss_dssp EEECCCGGG-TTCHHHHHHHHHHTCEEEECCTTCCCE-----ETTT--TE-ECC--CHHHHHHHHHHHHHTTCGGGEEEC
T ss_pred eEEECCCCC-CCCHHHHHHHHhCCcEEEecCCccccc-----cccc--cc-ccc--cHHHHHHHHHHHHHhCCcccEEEe
Confidence 677899843 4 7888888888898776642110000 0000 00 001 01234456777777774 57899
Q ss_pred CCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCC
Q 010547 367 SDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQV 430 (507)
Q Consensus 367 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~ 430 (507)
||........ ..++ .+....+......+...|++.+++.++.|.||+++|+++
T Consensus 303 TD~p~~~~~~----------~~gg-~~~~~l~~~~~~~l~~~Gis~eei~~~~~~Np~rlf~l~ 355 (364)
T 3k2g_A 303 HDVFVKMMLT----------RYGG-NGYAFVTKHFLPRLRRHGLDDAALETLMVTNPRRVFDAS 355 (364)
T ss_dssp CCCCSGGGSG----------GGTS-CTTSHHHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHCTT
T ss_pred CCCCCCCCCC----------CCCC-CCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 9965221111 0112 333333444444556789999999999999999999994
No 81
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.30 E-value=3.5e-05 Score=73.26 Aligned_cols=253 Identities=13% Similarity=0.055 Sum_probs=137.2
Q ss_pred cceeecccccCCCCCC--------CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCc---eeeEE
Q 010547 98 PGLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI---YVDVG 166 (507)
Q Consensus 98 PGfID~H~H~~~~~~~--------~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 166 (507)
--|||+|+|+....+. ..++.......+.+.||..++..+ .+.+......+.++... ...+.
T Consensus 26 m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g-------~~~~~~~~~~~La~~~~~~~~~~v~ 98 (325)
T 3ipw_A 26 QQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITS-------GCLNDFKKAIEIINKYQNLTNIKLV 98 (325)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-------CSHHHHHHHHHHHHHHGGGCSSEEE
T ss_pred CCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEcc-------CCHHHHHHHHHHHHHCCCcccceEE
Confidence 3599999999875441 135677888899999999998664 23444444444333211 11233
Q ss_pred EeccccCCC-----cc-cHHHHHHHHHc---CCcEEEEcccCCCCCCCC--CC----CHHHHHHHHHHHHh-cCCcEEEe
Q 010547 167 FWGGLVPEN-----AY-NASALEALLNA---GVLGLKSFMCPSGINDFP--MT----NASHIKEGLSVLAR-YKRPLLVH 230 (507)
Q Consensus 167 ~~~~~~~~~-----~~-~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~--~~----~~~~l~~~~~~a~~-~~~~v~~H 230 (507)
...|+.+.. .. ..+.++++... .+.+++.. +. +..+ .. ..+.+++.+++|++ +++|+.+|
T Consensus 99 ~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEi-GL---D~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH 174 (325)
T 3ipw_A 99 TTIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEI-GL---DYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFH 174 (325)
T ss_dssp EEECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEE-EE---ETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEE
T ss_pred EEEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEee-ec---CCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 333343321 11 45666666643 33444331 00 1111 11 23467888999999 99999999
Q ss_pred cCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHh
Q 010547 231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT 310 (507)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~ 310 (507)
+.... .++++++++.... ..+. +.|+.+ ++.+.++.+.+
T Consensus 175 ~r~A~----------------------------------~d~l~iL~~~~~~----~~~g-ViH~Fs--Gs~e~a~~~l~ 213 (325)
T 3ipw_A 175 CRKSW----------------------------------SDLCQLNKELGYN----GCKG-VVHCFD--GTEEEMNQILN 213 (325)
T ss_dssp EESCH----------------------------------HHHHHHHHHTTCT----TSCE-EECSCC--CCHHHHHHHHH
T ss_pred eCchH----------------------------------HHHHHHHHhcCCC----CCcE-EEEECC--CCHHHHHHHHh
Confidence 95432 4566666664211 1123 459888 67788888888
Q ss_pred CCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhc--CCeeEEeCCCCCCChhh-----hccccCC
Q 010547 311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD--GHIDMLSSDHSPTVPEL-----KLLDEGN 383 (507)
Q Consensus 311 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~--G~~~~lgtD~~~~~~~~-----~~~~~~~ 383 (507)
.|.-+++.-+. ++..... +.++. --.+.+-||..-..... +.+. .+
T Consensus 214 lG~yis~~G~~----------------------~k~~~~~----~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~-~p 266 (325)
T 3ipw_A 214 EGWDIGVTGNS----------------------LQSIELL----NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLK-EK 266 (325)
T ss_dssp TTCEEEECSGG----------------------GSSHHHH----HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCS-SC
T ss_pred cCcEEeeCccc----------------------cCcHHHH----HHHHhCCcccEEEeCCCccccccccccchhccc-cc
Confidence 88776653210 0111111 22222 12467999954221100 0000 00
Q ss_pred cc--------cc-CCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 384 FL--------KA-WGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 384 ~~--------~~-~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
+. .. ..+-..-...+...... +.-.|++++++.+.++.|.-++|++
T Consensus 267 ~p~r~~~k~~~~~~~g~rNeP~~v~~v~~~iA~l~g~~~eeva~~t~~Na~~lF~~ 322 (325)
T 3ipw_A 267 DFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYFP 322 (325)
T ss_dssp CCCBCGGGCCTTSCBTTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSC
T ss_pred CccccccccccccccCCcCcHHHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHHhCc
Confidence 00 00 00101111224443433 4556899999999999999999987
No 82
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.25 E-value=4.5e-05 Score=70.97 Aligned_cols=243 Identities=14% Similarity=0.162 Sum_probs=123.0
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc---
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--- 176 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 176 (507)
+||+|+|+..... ..+.......+.+.||+.++..+. . ........+....... +....++.+...
T Consensus 2 ~iD~H~Hl~~~~~--~~~~~~~l~~~~~~Gv~~~v~~~~--~-----~~~~~~~~~~~~~~p~--~~~~~g~~P~~~~~~ 70 (265)
T 2gzx_A 2 LIDTHVHLNDEQY--DDDLSEVITRAREAGVDRMFVVGF--N-----KSTIERAMKLIDEYDF--LYGIIGWHPVDAIDF 70 (265)
T ss_dssp CEEEEECTTSGGG--TTTHHHHHHHHHHTTCCEEEEEEC--S-----HHHHHHHHHHHHHCTT--EEEEECCCGGGGGGC
T ss_pred eEEEeeCCCCccc--ccCHHHHHHHHHHcCCCEEEEeCC--C-----HHHHHHHHHHHHhCCC--EEEEEEeccCccccC
Confidence 7999999986432 124666777888999999886641 1 2333333333332221 223333443221
Q ss_pred --ccHHHHHHHHHc-CCcEEEEc-ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccc
Q 010547 177 --YNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (507)
Q Consensus 177 --~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 252 (507)
...++++++.+. +..+++.. +.............+.+...++.|+++++++.+|+...
T Consensus 71 ~~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~------------------ 132 (265)
T 2gzx_A 71 TEEHLEWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREA------------------ 132 (265)
T ss_dssp CHHHHHHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC------------------
T ss_pred CHHHHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEeccc------------------
Confidence 124455555432 23333321 00000000012344568899999999999999998421
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHh-CCCCEEEecccccccccccCC
Q 010547 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT-NGDSITVETCPHYLAFSAEEI 331 (507)
Q Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~-~g~~i~~~~~~~~~~~~~~~~ 331 (507)
...+++++++... ...++. .|.... ..+.+..+.+ .|+-+.. +... ...
T Consensus 133 ----------------~~~~~~~l~~~p~----~~~~~i-~H~~~g--~~~~~~~~l~~~~~y~~~--sg~~-~~~---- 182 (265)
T 2gzx_A 133 ----------------TQDCIDILLEEHA----EEVGGI-MHSFSG--SPEIADIVTNKLNFYISL--GGPV-TFK---- 182 (265)
T ss_dssp ----------------HHHHHHHHHHTTG----GGTCEE-ETTCCS--CHHHHHHHHHTSCCEEEE--CGGG-GCS----
T ss_pred ----------------HHHHHHHHHhcCC----CCCcEE-EEcCCC--CHHHHHHHHHHCCceEEe--ccee-ecC----
Confidence 1244455555310 023454 566542 3444555545 5654433 2110 000
Q ss_pred CCCCCceeEcCCCCChhhHHHHHHHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHh-c
Q 010547 332 PDGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-Y 408 (507)
Q Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 408 (507)
.. ..+.++++. | -.+.++||+.-..... + .|.......+........+ .
T Consensus 183 --------------~~---~~~~~~i~~~~~dril~gSD~P~~~~~~-------~----~g~~~~~~~~~~~~~~l~~~~ 234 (265)
T 2gzx_A 183 --------------NA---KQPKEVAKHVSMERLLVETDAPYLSPHP-------Y----RGKRNEPARVTLVAEQIAELK 234 (265)
T ss_dssp --------------SC---CHHHHHHHHSCTTTEEECCCTTSCCCTT-------C----TTSCCCGGGHHHHHHHHHHHT
T ss_pred --------------Cc---HHHHHHHHhCChhhEEEccCCCCCCCcc-------c----CCCCCChHHHHHHHHHHHHHh
Confidence 00 122333333 3 4678999975332110 0 0111111123333444434 6
Q ss_pred CCCHHHHHHHHhhchhHHhCC
Q 010547 409 GVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 409 gls~~~al~~~T~n~A~~lgl 429 (507)
+++.++.-++.+.|+++++++
T Consensus 235 ~~~~~~~~~i~~~Na~rl~~~ 255 (265)
T 2gzx_A 235 GLSYEEVCEQTTKNAEKLFNL 255 (265)
T ss_dssp TCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHhCC
Confidence 899999999999999999998
No 83
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.24 E-value=7.9e-05 Score=71.22 Aligned_cols=159 Identities=16% Similarity=0.181 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 210 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
...+++.++.|++.++|+.+|+..... +.+ .++++++.+. ...+
T Consensus 167 ~~~f~aq~~~A~~~glPViiH~r~g~~-------------------------------a~~-~l~iL~e~~~----~~~~ 210 (330)
T 3pnz_A 167 EKTIRAVARAHHETKAPIHSHTEAGTM-------------------------------ALE-QIEILKQENI----PLEY 210 (330)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECGGGCC-------------------------------HHH-HHHHHHHTTC----CGGG
T ss_pred HHHHHHHHHHHHHHCCeEEEeCCCCcC-------------------------------hHH-HHHHHHHcCC----CCCe
Confidence 345788899999999999999853111 112 2555555311 1235
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEeC
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLSS 367 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lgt 367 (507)
+.+.|+... .+.+..+++.+.|..+.+..... +... ........+.+.+++|. .+.+.|
T Consensus 211 vvi~H~~~s-~~~e~a~~~l~~G~~i~~~g~~t---------------~~~~---~~~~~~~~l~~lv~~g~~drilleT 271 (330)
T 3pnz_A 211 LSIGHMDRN-LDPYYHKQVAKTGAFMSFDGIAK---------------IKYA---PESARIAAILYLVSEGFEDQILVSG 271 (330)
T ss_dssp EEETTGGGS-CCHHHHHHHHTTTCEEEECCTTC---------------TTTC---CHHHHHHHHHHHHHTTCGGGEEECC
T ss_pred EEEecCCCC-CCHHHHHHHHHcCcEEEEccCcc---------------cCCC---ChHHHHHHHHHHHHcCCCCeEEEeC
Confidence 677899622 55778888888887766542110 0000 01223345667777663 578999
Q ss_pred CCCCCChhhhccccCCccccCCCCchh-hhHHHHHHHHHHhcCCCHHH-HHHHHhhchhHHhCCC
Q 010547 368 DHSPTVPELKLLDEGNFLKAWGGISSL-QFVLPVTWSYGRKYGVTLEQ-LASWWSERPAKLAGQV 430 (507)
Q Consensus 368 D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~gls~~~-al~~~T~n~A~~lgl~ 430 (507)
|.... ...... |. ..+..-+ ...++.+...+...|+|.++ +.++.|.||+++|+++
T Consensus 272 D~p~~-~~~~~~--G~----~~~~~~~~~~~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 272 DTARK-TYYKHY--GH----GPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTFK 329 (330)
T ss_dssp CCCSG-GGSHHH--HC----CSTTTHHHHTHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHSSCC
T ss_pred CCCCC-CCCCcc--CC----CCCcchHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHhcCC
Confidence 96531 111000 00 0111111 12222332234678999998 9999999999999973
No 84
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.24 E-value=1.5e-05 Score=74.44 Aligned_cols=240 Identities=16% Similarity=0.132 Sum_probs=126.5
Q ss_pred ceeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCC---
Q 010547 99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN--- 175 (507)
Q Consensus 99 GfID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 175 (507)
-++|+|+|+...... .+.......+.+.||++++..+ + .........+.+.... ++....|+.+..
T Consensus 12 ~~~~~~~hl~~~~~~--~~~~~~l~~~~~~GV~~~v~~~--~-----~~~~~~~~~~l~~~~p--~i~~~~G~hP~~~~~ 80 (268)
T 1j6o_A 12 HMVDTHAHLHFHQFD--DDRNAVISSFEENNIEFVVNVG--V-----NLEDSKKSLDLSKTSD--RIFCSVGVHPHDAKE 80 (268)
T ss_dssp CEEEEEECTTSGGGT--TTHHHHHHTTTTTTEEEEEEEC--S-----SHHHHHHHHHHHTTCT--TEEEEECCCGGGGGG
T ss_pred cccccccCCCChhhc--cCHHHHHHHHHHcCCCEEEEeC--C-----CHHHHHHHHHHHHHCC--CEEEEEeeccccccc
Confidence 368999999864332 4566777788899999988664 1 2334444444443322 233333344322
Q ss_pred --cccHHHHHHHHHc------CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCc
Q 010547 176 --AYNASALEALLNA------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 247 (507)
Q Consensus 176 --~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 247 (507)
....++++++... |..|++.+... .......+.+...++.|.++++++.+|+...
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~iGe~Gld~~~~~----~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~------------- 143 (268)
T 1j6o_A 81 VPEDFIEHLEKFAKDEKVVAIGETGLDFFRNI----SPAEVQKRVFVEQIELAGKLNLPLVVHIRDA------------- 143 (268)
T ss_dssp CCTTHHHHHHHHTTSTTEEEEEEEEEETTTCS----SCHHHHHHHHHHHHHHHHHHTCCEEEEEESC-------------
T ss_pred cCHHHHHHHHHHhccCCEEEEEccccCCcccC----CChHHHHHHHHHHHHHHHHhCCCEEEEeCch-------------
Confidence 1234555555432 22233322100 0012345678899999999999999998421
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccccccccc
Q 010547 248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS 327 (507)
Q Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~ 327 (507)
...+++++++... ...++.+ |+.+ ...+.++.+.+.|+-+.. +.. +.+
T Consensus 144 ---------------------~~~~~~il~~~p~----~~~~~I~-H~~~--g~~~~~~~~~~~g~y~~~--sg~-~~~- 191 (268)
T 1j6o_A 144 ---------------------YSEAYEILRTESL----PEKRGVI-HAFS--SDYEWAKKFIDLGFLLGI--GGP-VTY- 191 (268)
T ss_dssp ---------------------HHHHHHHHHHSCC----CSSCEEE-TTCC--SCHHHHHHHHHHTEEEEE--CGG-GGC-
T ss_pred ---------------------HHHHHHHHHhcCC----CCCCEEE-EcCC--CCHHHHHHHHHCCCeEEe--ccc-ccc-
Confidence 1344555555310 1345666 8865 334555555555644333 211 000
Q ss_pred ccCCCCCCCceeEcCCCCChhhHHHHHHHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH
Q 010547 328 AEEIPDGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG 405 (507)
Q Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 405 (507)
.... .+.++++. + -.+.++||++-..... .. |.......+.......
T Consensus 192 -----------------~~~~---~l~~~i~~~~~driL~eTD~P~~~~~~-~~----------g~~n~p~~~~~~~~~l 240 (268)
T 1j6o_A 192 -----------------PKNE---ALREVVKRVGLEYIVLETDCPFLPPQP-FR----------GKRNEPKYLKYVVETI 240 (268)
T ss_dssp -----------------TTCH---HHHHHHHHHCGGGEEECCCBTSCCCGG-GT----------TSCCCGGGHHHHHHHH
T ss_pred -----------------cchH---HHHHHHHhCChhhEEEecCCCCCCCcc-cC----------CCCCchHHHHHHHHHH
Confidence 0111 12233332 2 4678999975332211 00 0000011133333333
Q ss_pred -HhcCCCHHHHHHHHhhchhHHhCC
Q 010547 406 -RKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 406 -~~~gls~~~al~~~T~n~A~~lgl 429 (507)
...+++.++.-+..+.|++++||+
T Consensus 241 a~~~~~~~e~~~~i~~~Na~rlf~l 265 (268)
T 1j6o_A 241 SQVLGVPEAKVDEATTENARRIFLE 265 (268)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHhCcCHHHHHHHHHHHHHHHhCc
Confidence 336899999999999999999987
No 85
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=98.10 E-value=4.8e-05 Score=71.78 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=73.5
Q ss_pred cceeecccccCCCCC----------CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEE
Q 010547 98 PGLIDVHAHLDDPGR----------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 167 (507)
Q Consensus 98 PGfID~H~H~~~~~~----------~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (507)
+++||+|+|+..... ....+.......+-+.||+..+... . .......+.+.+..+....+. ..
T Consensus 12 ~~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~-~-~~~~~~n~~~~~~~~~~p~r~----~~ 85 (288)
T 2ffi_A 12 LTAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQ-P-SFLGTDNRYLLSALQTVPGQL----RG 85 (288)
T ss_dssp CCCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBC-C-GGGTTCCHHHHHHHHHSTTTB----CC
T ss_pred CCceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEEC-C-ccccccHHHHHHHHHHCCCCE----EE
Confidence 379999999975321 0013455666777889999887553 1 111122233333333222211 11
Q ss_pred eccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 010547 168 WGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (507)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 232 (507)
.+++.+.. ..++++++.+.|..|++...... ..+....+.+..+++.+.++|+++.+|+.
T Consensus 86 ~~~v~p~~--~~~el~~~~~~g~~Gi~~~~~~~---~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 145 (288)
T 2ffi_A 86 VVMLERDV--EQATLAEMARLGVRGVRLNLMGQ---DMPDLTGAQWRPLLERIGEQGWHVELHRQ 145 (288)
T ss_dssp BBCCCSSC--CHHHHHHHHTTTCCEEECCCSSS---CCCCTTSTTTHHHHHHHHHHTCEEEECSC
T ss_pred EEEeCCCC--CHHHHHHHHHCCCeEEEEecccC---CCCCcccHHHHHHHHHHHHCCCeEEEeec
Confidence 12233222 24778888888999997654332 11234567899999999999999999984
No 86
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=98.09 E-value=0.00015 Score=67.79 Aligned_cols=229 Identities=13% Similarity=0.073 Sum_probs=124.8
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCC-------------------------CHH----HH
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTI-------------------------STE----TL 150 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~-------------------------~~~----~~ 150 (507)
+||+|+|+... .....+.+-+.||...+..+. .+... ... ..
T Consensus 4 ~iD~H~Hl~~~-------~~~~l~~m~~~Gv~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~n 74 (272)
T 3cjp_A 4 IIDGHTHVILP-------VEKHIKIMDEAGVDKTILFST--SIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSI 74 (272)
T ss_dssp CEEEEEECCSS-------HHHHHHHHHHHTCCEEEEECC--SCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHH
T ss_pred EEEehhhcCCC-------HHHHHHHHHHcCCCEEEEeCC--CCCccccchhhhhhhhhhcccccccCCchhhHHHHHhhH
Confidence 79999998753 355666778899999887642 22100 001 11
Q ss_pred HHHHHHHhcCceeeEEEeccccCCC--cccHHHHHHHH-HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc-CCc
Q 010547 151 KLKVDAAEKRIYVDVGFWGGLVPEN--AYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRP 226 (507)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~ 226 (507)
....+.+..... .+...+...... +...++++++. +.|..+++.+.. +. . ..+.+..+++.|+++ +++
T Consensus 75 ~~~~~~~~~~p~-~~~~~g~~p~~~~~~~~~~el~~~~~~~g~~gi~~~g~----~~--~-~~~~~~~~~~~a~~~~~lp 146 (272)
T 3cjp_A 75 KELTNVIQAYPS-RYVGFGNVPVGLSENDTNSYIEENIVNNKLVGIGELTP----AS--G-QIKSLKPIFKYSMDSGSLP 146 (272)
T ss_dssp HHHHHHHHHSTT-TEEEEECCCTTCCHHHHHHHHHHHTTTTTCSEEEEECC----CT--T-CGGGGHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCCC-eEEEEEEeCCCCCcHHHHHHHHHHHHhcCceEEEecCC----CC--C-ccHHHHHHHHHHHhccCCc
Confidence 222222221111 112222122222 23345666654 468889986421 11 2 567899999999999 999
Q ss_pred EEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHH
Q 010547 227 LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLM 306 (507)
Q Consensus 227 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~ 306 (507)
+.+|+..... ..+...+..++++. ++.++.+.|.... ...+.++
T Consensus 147 v~iH~~~~~~-----------------------------~~~~~~~~~~l~~~------p~l~iv~~H~G~~-~~~~~~~ 190 (272)
T 3cjp_A 147 IWIHAFNPLV-----------------------------LQDIKEIAELCKAF------PKVPVILGHMGGS-NWMTAVE 190 (272)
T ss_dssp EEECCSTTCC-----------------------------HHHHHHHHHHHHHS------TTSCEEEGGGGGG-GHHHHHH
T ss_pred EEEeCCCCCc-----------------------------cccHHHHHHHHHHC------CCceEEEECCCCc-cHHHHHH
Confidence 9999843210 11234555566652 3567788888764 3223333
Q ss_pred HHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccc
Q 010547 307 EAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLK 386 (507)
Q Consensus 307 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~ 386 (507)
.+++. -++.+.++.. . .......+.+.+ +-.+.+|||+.-....
T Consensus 191 ~~~~~-~~~y~~~s~~---------------------~-~~~~~~~~~~~~--~dril~gSD~P~~~~~----------- 234 (272)
T 3cjp_A 191 LAKEI-QNLYLDTSAY---------------------F-STFVLKIVINEL--PLKCIFGTDMPFGDLQ----------- 234 (272)
T ss_dssp HHHHC-TTEEEECTTC---------------------S-CHHHHHHHHHHS--TTTEECCCCTTSSCHH-----------
T ss_pred HHHhC-CCEEEEeccc---------------------c-cHHHHHHHHHhC--CCeEEEeCCCCCCChH-----------
Confidence 33332 1233332210 0 111222333333 4678899997532211
Q ss_pred cCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCC
Q 010547 387 AWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQV 430 (507)
Q Consensus 387 ~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~ 430 (507)
.........+++.++.-+....|+++++|++
T Consensus 235 -------------~~~~~~~~~~l~~~~~~~i~~~Na~rl~~l~ 265 (272)
T 3cjp_A 235 -------------LSIEAIKKMSNDSYVANAVLGDNISRLLNIE 265 (272)
T ss_dssp -------------HHHHHHHHHCSSHHHHHHHHTHHHHHHHTC-
T ss_pred -------------HHHHHHHhcCCCHHHHHHHHHHHHHHHhCcc
Confidence 1122233468999999999999999999983
No 87
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.02 E-value=0.0002 Score=68.86 Aligned_cols=164 Identities=17% Similarity=0.084 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceE
Q 010547 211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL 290 (507)
Q Consensus 211 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 290 (507)
+.+++.++.|++.++++.+|+..... +. +.++++++.+. ...++
T Consensus 173 ~~f~aq~~lA~~~glPViiH~~~gr~-------------------------------a~-~~~~iL~~~~~----~~~~~ 216 (339)
T 3gtx_A 173 LFFRAAARVQRETGVPIITHTQEGQQ-------------------------------GP-QQAELLTSLGA----DPARI 216 (339)
T ss_dssp HHHHHHHHHHHHHCCCEEEECSTTCC-------------------------------HH-HHHHHHHHTTC----CGGGE
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCcC-------------------------------HH-HHHHHHHHcCC----CcccE
Confidence 45778889999999999999943111 11 23555555311 12346
Q ss_pred EEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEeCC
Q 010547 291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLSSD 368 (507)
Q Consensus 291 ~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lgtD 368 (507)
.+.|+... .+.+..+++.+.|..+.+..... +. +...| ........+.++++++. .+.+.||
T Consensus 217 vi~H~~~~-~~~e~a~~~l~~G~~i~~~g~~t------~~-------~~~~p--~~~~~~~~l~~li~~~~~drilleTD 280 (339)
T 3gtx_A 217 MIGHMDGN-TDPAYHRETLRHGVSIAFDRIGL------QG-------MVGTP--TDAERLSVLTTLLGEGYADRLLLSHD 280 (339)
T ss_dssp EECCGGGC-CCHHHHHHHHTTTCEEEECCTTC------CS-------STTCC--CHHHHHHHHHHHHHTTCGGGEEECCC
T ss_pred EEEccCCC-CCHHHHHHHHHcCcEEEEccCcc------cc-------ccCCC--chHHHHHHHHHHHHhcCCCeEEEecC
Confidence 77899832 45788888888898776642110 00 00001 01134456677777764 4689999
Q ss_pred CCCCChhhhccccCCccc-cCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 369 HSPTVPELKLLDEGNFLK-AWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
..-....... ..+... ...+..+....+......+...|++.+++.++.|.||+++|+
T Consensus 281 ~p~~~~~~P~--~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 281 SIWHWLGRPP--AIPEAALPAVKDWHPLHISDDILPDLRRRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp CEEEESSSCC--CCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred CCccccCCcc--cccccccccCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 6521000000 000000 000112223333444455677899999999999999999986
No 88
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=98.01 E-value=0.00016 Score=69.41 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=76.2
Q ss_pred ecceeecccccCCCCCCC-------C----------CCh-hHHHHHHHhCCceEEEeCCCCCCCCC---CCH--------
Q 010547 97 MPGLIDVHAHLDDPGRTE-------W----------EGF-PSGTKAAAAGGITTLIDMPLNSDPST---IST-------- 147 (507)
Q Consensus 97 ~PGfID~H~H~~~~~~~~-------~----------~~~-~~~~~~~l~~GvTt~~~~~~~~~p~~---~~~-------- 147 (507)
|+++||+|+|+....... . .+. ......+-+.||...+..+ +.|.. ...
T Consensus 1 m~~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~--~~p~~~~~~d~~~~~~~~~ 78 (327)
T 2dvt_A 1 MQGKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSL--NAPAVQAIPDRRKAIEIAR 78 (327)
T ss_dssp CCSEEEEEEEECCHHHHGGGTTTSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEE--CSSGGGGCCCHHHHHHHHH
T ss_pred CCCeEEEecccCCHHHHHHHhccCCcccccccchhcCChhHHHHHHhhhcCCcEEEEeC--CCCcccccCChHHHHHHHH
Confidence 578999999996532110 0 023 5566777889999887653 12211 111
Q ss_pred HHHHHHHHHHhcCceeeEEEeccccCCCc-ccHHHHHHHHH-cCCcEEEEcccCCCC--CCCCCCCHHHHHHHHHHHHhc
Q 010547 148 ETLKLKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLN-AGVLGLKSFMCPSGI--NDFPMTNASHIKEGLSVLARY 223 (507)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~a~~~ 223 (507)
..-....+....... .+...+++....+ ...++++++.+ .|..+++........ ........+.+..+++.|.++
T Consensus 79 ~~n~~~~~~~~~~p~-r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (327)
T 2dvt_A 79 RANDVLAEECAKRPD-RFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327)
T ss_dssp HHHHHHHHHHHHCTT-TEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCC-ceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence 111122222221111 1223334444433 35677888765 599999865432100 001245667899999999999
Q ss_pred CCcEEEecCC
Q 010547 224 KRPLLVHAEM 233 (507)
Q Consensus 224 ~~~v~~H~~~ 233 (507)
+++|.+|+..
T Consensus 158 ~lpv~iH~~~ 167 (327)
T 2dvt_A 158 DVPFYLHPRN 167 (327)
T ss_dssp TCCEEEECCC
T ss_pred CCeEEECCCC
Confidence 9999999854
No 89
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=97.92 E-value=0.00013 Score=71.14 Aligned_cols=144 Identities=15% Similarity=0.099 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 210 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
++.+..+++.|+++|.++.+|+.+... ..|. ..+...+.+ . |..
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~----------------------~~~~----~~i~~al~~---l-------g~~ 257 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVT----------------------LPNL----NTLYSAIQV---L-------KVE 257 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTT----------------------SSSS----HHHHHHHHT---S-------CCS
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCC----------------------CCch----HHHHHHHhc---c-------CCC
Confidence 778999999999999999999954310 0010 122222221 1 222
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCC
Q 010547 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH 369 (507)
Q Consensus 290 ~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~ 369 (507)
.+.|+....+..++++.+++.|+.+. +||..-... +.. + .....++.++++.|+++++|||.
T Consensus 258 -ri~Hgv~l~~~~~l~~~l~~~~i~v~--~cP~SN~~l-------~~~----~----~~~~~pi~~ll~~Gv~V~lgTD~ 319 (371)
T 2pgf_A 258 -RIGHGIRVAESQELIDMVKEKNILLE--VCPISNVLL-------KNA----K----SMDTHPIRQLYDAGVKVSVNSDD 319 (371)
T ss_dssp -EEEECGGGGGCHHHHHHHHHTTCEEE--ECHHHHHHT-------TSS----S----CGGGCTHHHHHHTTCEEEECCBC
T ss_pred -EEecchhccccHHHHHHHHHcCCeEE--ECcchhHHh-------CCC----C----ccccChHHHHHHCCCeEEEeCCC
Confidence 46777654344556888888887654 477421111 000 0 00112467889999999999996
Q ss_pred CCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC
Q 010547 370 SPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~lgl 429 (507)
..+.. .. +...+..+ ...+++++++ +.+|.|++++..+
T Consensus 320 ~~~~~-~~--------------------l~~e~~~a~~~~~l~~~~l-~~lt~ns~~asf~ 358 (371)
T 2pgf_A 320 PGMFL-TN--------------------INDDYEELYTHLNFTLEDF-MKMNEWALEKSFM 358 (371)
T ss_dssp HHHHT-CC--------------------HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHCCS
T ss_pred CcccC-CC--------------------HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHcC
Confidence 53211 11 32333333 3469999996 8889999999887
No 90
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.87 E-value=0.0012 Score=62.49 Aligned_cols=251 Identities=13% Similarity=0.059 Sum_probs=133.1
Q ss_pred EecceeecccccCCCC----CCC-------CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceee
Q 010547 96 IMPGLIDVHAHLDDPG----RTE-------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (507)
Q Consensus 96 v~PGfID~H~H~~~~~----~~~-------~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (507)
+=||.||+|.|+.... +.. .-........+-+.||+..+-.. . .........+...++...++ ...
T Consensus 23 ~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq-~-~~~~~dN~~ll~~l~~~~~r-~~G 99 (303)
T 4d9a_A 23 PPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQ-A-SCHGTDNAATLDAIARAQGK-ARG 99 (303)
T ss_dssp CCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEEC-C-GGGTTCCHHHHHHHHHTTTS-EEE
T ss_pred CCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEec-c-ccccccHHHHHHHHHhCCCc-EEE
Confidence 4569999999998631 110 11234455666789999888653 1 11122223333322222222 222
Q ss_pred EEEeccccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcc
Q 010547 165 VGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244 (507)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 244 (507)
+. .+... ...++++++.+.|..|++....... ......+.+..+++.+.+ |.++.+|....
T Consensus 100 va---~vdp~--~~~~eL~~l~~~G~rGvR~~~~~~~---~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~---------- 160 (303)
T 4d9a_A 100 IA---VVDPA--IDEAELAALHEGGMRGIRFNFLKRL---VDDAPKDKFLEVAGRLPA-GWHVVIYFEAD---------- 160 (303)
T ss_dssp EE---CCCTT--CCHHHHHHHHHTTEEEEEEECCTTT---CSCCCHHHHHHHHTSCCT-TCEEEEECCGG----------
T ss_pred EE---EeCCC--CCHHHHHHHHHCCCCEEEeecccCC---ccccCHHHHHHHHHHHhc-CCEEEEecccc----------
Confidence 22 12222 2357788888889999998543210 134678899999999999 99999998422
Q ss_pred cCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh-------HHHHHHHHHHhCCCCEEE
Q 010547 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-------SSLDLLMEAKTNGDSITV 317 (507)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~-------~~~~~i~~~~~~g~~i~~ 317 (507)
.+..+.+++.+. +.++.+.|+.... ...+.+..+.+..-++.+
T Consensus 161 -----------------------~l~~l~~~~~~~-------~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~NV~v 210 (303)
T 4d9a_A 161 -----------------------ILEELRPFMDAI-------PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSREDIWF 210 (303)
T ss_dssp -----------------------GHHHHHHHHHHC-------SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTTEEE
T ss_pred -----------------------cHHHHHHHHHHC-------CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCCCEEE
Confidence 134566666653 6779999998520 233333333333224555
Q ss_pred ecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhc-CCeeEEeCCCCCCChhhhccccCCccccCCCCchhhh
Q 010547 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD-GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF 396 (507)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~-G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (507)
.++.-..... . .++ .......+...++. --++.+|||+........ ...
T Consensus 211 KlSg~~~~~~--------~----~~~--~~~~~~~~~~~~~~~~dRlmfGSDwP~~~~~~~-------------~~~--- 260 (303)
T 4d9a_A 211 KATCPDRLDP--------A----GPP--WDDFARSVAPLVADYADRVIWGTAWPHPNMQDA-------------IPD--- 260 (303)
T ss_dssp ECCCHHHHCT--------T----CTT--CHHHHHHHHHHHHHTTTSEECCCCTTCTTCTTS-------------CCC---
T ss_pred EeeCceecCC--------C----CCC--HHHHHHHHHHHHHhCcccEEEecCCCCcccccC-------------CCC---
Confidence 5442111000 0 000 11112222233333 345789999775533210 000
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 397 VLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 397 ~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
...++....+.--+.++.=+..-.|+++++++
T Consensus 261 -~~~~~~~~~~~~~~~~~~~~il~~NA~rly~~ 292 (303)
T 4d9a_A 261 -DGLVVDMIPRIAPTPELQHKMLVTNPMRLYWS 292 (303)
T ss_dssp -HHHHHHTHHHHSCSHHHHHHHHTHHHHHHHCG
T ss_pred -HHHHHHHHHHHCCCHHHHHHHHHHHHHHHhCC
Confidence 11122222222125677778888999999998
No 91
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.85 E-value=0.00012 Score=67.66 Aligned_cols=168 Identities=16% Similarity=0.151 Sum_probs=87.4
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCC-CCH----HHHHHHHH----HHhcCceeeEEEecc
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPST-IST----ETLKLKVD----AAEKRIYVDVGFWGG 170 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~-~~~----~~~~~~~~----~~~~~~~~~~~~~~~ 170 (507)
+||+|+|+.... +. ....+.+.||+.++..+ +.+.. ... +.+....+ .+... ...+....|
T Consensus 2 ~iDtH~Hld~~~------~~-~l~~a~~~GV~~~i~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~-~~~v~~~~G 71 (261)
T 3guw_A 2 YFDSHLHSEGLG------FS-ELVKLKENGIKEVCSLA--FFPVKPKYPQTMIDVFRKLTEFEPLRCEAA-GVKMHPAVG 71 (261)
T ss_dssp CCBCCCCGGGCC------HH-HHHHHHTTSCCEECCBC--CCSSCCSSHHHHHHHHHHHHHTHHHHHHTT-TCEECCBCC
T ss_pred eEEeccCCCCCC------hH-HHHHHHHCCCcEEEEec--cCccccchhhhHHHHHHHHHHHHHHHHHHC-CCCEEEEEE
Confidence 799999998643 22 35677899999998654 22221 111 22223321 12211 112333333
Q ss_pred ccCCCc-ccH-HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcC
Q 010547 171 LVPENA-YNA-SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 248 (507)
Q Consensus 171 ~~~~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 248 (507)
+.+... ... +.++.+.+..+.+++.. |-+.......+.+++.+++|+++++|+.+|+.....
T Consensus 72 iHP~~~~~~~~~~~~~l~~~~vvaIGEi----GLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~------------ 135 (261)
T 3guw_A 72 IHPRCIPPDYEFVLGYLEEGEWVAFGEI----GLELVTDEEIEVLKSQLELAKRMDVPCIIHTPRGNK------------ 135 (261)
T ss_dssp CCGGGCCTTTHHHHHHHTTSCCSCEEEE----ECSSCCHHHHHHHHHHHHHHHHHTCCEEEECCSSST------------
T ss_pred ECcccccccHHHHHHHhCcCCeEEEEEe----cCCCChHHHHHHHHHHHHHHHHhCCeEEEEcCCCcc------------
Confidence 433221 112 23333333344455431 002111223345888999999999999999954210
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEec
Q 010547 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319 (507)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~ 319 (507)
..+..++++++++.+. +..+..+.|++. +.++.+.+.|..+++..
T Consensus 136 -----------------~~a~~~~~~il~~~~~----~~~~~vi~H~~~-----~~a~~~l~~G~yis~~~ 180 (261)
T 3guw_A 136 -----------------LKATRKTLEILESLDF----PADLAVIDHVNF-----ETLDMVLETEYWIGLTV 180 (261)
T ss_dssp -----------------THHHHHHHHHHHHTTC----CTTSEEEESCCT-----TTHHHHHTSSSEEEEEC
T ss_pred -----------------cchHHHHHHHHHHcCC----CCCCEEEEeCCH-----HHHHHHHhCCEEEEecC
Confidence 1233567777776411 112355678843 25566667888776653
No 92
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.79 E-value=0.0012 Score=63.66 Aligned_cols=158 Identities=16% Similarity=0.157 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCce
Q 010547 210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (507)
Q Consensus 210 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 289 (507)
...+++..+.+++.|.|+.+|+..... .. +.++++.+.+. ...+
T Consensus 192 ~k~frA~a~aa~etG~Pv~iHt~~~~~----------------------------~~----e~l~iL~eeG~----~~~~ 235 (360)
T 3tn4_A 192 KMFFRAAARAQKETGAVIITHTQEGTM----------------------------GP----EQAAYLLEHGA----DPKK 235 (360)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSTTCC----------------------------HH----HHHHHHHHTTC----CGGG
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCcccC----------------------------CH----HHHHHHHHcCC----CCCc
Confidence 345888999999999999999954321 11 22233333210 1235
Q ss_pred EEEEec-CChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCC--eeEEe
Q 010547 290 LHIVHL-SDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLS 366 (507)
Q Consensus 290 ~~~~h~-~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~--~~~lg 366 (507)
+.+.|+ .+ ...+..+++.+.|..+.++.... +.. . ..| .+......+.+++++|- .+.++
T Consensus 236 vvi~H~~~~--~d~~~~~~~l~~G~yl~fD~iG~------~~~------~-~~p--~d~~r~~~l~~lv~~g~~drILLs 298 (360)
T 3tn4_A 236 IVIGHMCDN--TDPDYHRKTLAYGVYIAFDRFGI------QGM------V-GAP--TDEERVRTLLALLRDGYEKQIMLS 298 (360)
T ss_dssp EEECCGGGC--CCHHHHHHHHTTTCEEEECCTTC------CCS------T-TCC--CHHHHHHHHHHHHHTTCGGGEEEC
T ss_pred eEEEcCCCC--CCHHHHHHHHHcCCEEEEccccc------ccc------c-CCC--ChHHHHHHHHHHHHhcCcceEEEe
Confidence 788895 55 56677888888998777653210 000 0 000 12344556777777774 57899
Q ss_pred CCCC------CCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHh
Q 010547 367 SDHS------PTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLA 427 (507)
Q Consensus 367 tD~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~l 427 (507)
+|.. ++..... +....++ .++...+.......++.|+|.+++-++.+.||+++|
T Consensus 299 tDa~~~~~~~py~~p~p------~r~~~~~-~~y~~i~~~~ip~L~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 299 HDTVNVWLGRPFTLPEP------FAEMMKN-WHVEHLFVNIIPALKNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp CCCEEEESSSCCCCCHH------HHHHTTT-CSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred cCCCcccccCCCCCccc------ccccCCC-CCchhHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHh
Confidence 9962 2211100 0000011 112222333344556789999999999999999987
No 93
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.64 E-value=0.0013 Score=62.44 Aligned_cols=150 Identities=10% Similarity=0.011 Sum_probs=87.3
Q ss_pred eeecccccCCCC-----CC--------CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEE
Q 010547 100 LIDVHAHLDDPG-----RT--------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166 (507)
Q Consensus 100 fID~H~H~~~~~-----~~--------~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 166 (507)
.||+|.|+.... +. ..-........+-+.||+.++... +. ..........+.++... .+.
T Consensus 5 ~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~----~~-~~~~~n~~l~~la~~~p--~~~ 77 (303)
T 4do7_A 5 RIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQ----AR-AGRDETAFLLELACDEA--RIA 77 (303)
T ss_dssp CEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEEC----CS-SSHHHHHHHHHHHTTCT--TEE
T ss_pred EEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEc----cC-CcHHHHHHHHHHHHhCC--CeE
Confidence 499999998642 11 011244556677789999988653 11 12333333444333322 222
Q ss_pred Eecc-ccCCCcccHHHHHHHHHcCCcEEEEcccCCCCCCCC--CCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhc
Q 010547 167 FWGG-LVPENAYNASALEALLNAGVLGLKSFMCPSGINDFP--MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKL 243 (507)
Q Consensus 167 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 243 (507)
...+ .....++..++++++...|..|++...... ..+ ....+.+...++.++++|+++.+|+...
T Consensus 78 g~vg~v~~~~~~~~~~L~~l~~~gv~Gir~~~~~~---~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~--------- 145 (303)
T 4do7_A 78 AVVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDE---ADVRAFVDDADFARGVAWLQANDYVYDVLVFER--------- 145 (303)
T ss_dssp EEEECCCTTCTTHHHHHTTCCSSCEEEEECCGGGS---SCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG---------
T ss_pred EEEEEeCCCCchHHHHHHHHhhcCceEEEecCcCC---CCccccccCHHHHHHHHHHHHCCCeEEEecCHH---------
Confidence 2222 222333345666666666888888643211 001 1344678899999999999999998432
Q ss_pred ccCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh
Q 010547 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA 298 (507)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~ 298 (507)
.+..+.+++++ .++.++.+.|+...
T Consensus 146 ------------------------~l~~l~~ll~~------~P~l~iVi~H~G~p 170 (303)
T 4do7_A 146 ------------------------QLPDVQAFCAR------HDAHWLVLDHAGKP 170 (303)
T ss_dssp ------------------------GHHHHHHHHHH------CCSSCEEEGGGGCC
T ss_pred ------------------------HHHHHHHHHHH------CCCCCEEEeCCCCC
Confidence 12455666665 34788999999763
No 94
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=97.54 E-value=0.0018 Score=61.34 Aligned_cols=129 Identities=13% Similarity=0.049 Sum_probs=72.8
Q ss_pred ceeecccccCCCCCC----------------CCCChhHHHHHHHhCCceEEEeCCCCCCCCC--CCH--------HHHHH
Q 010547 99 GLIDVHAHLDDPGRT----------------EWEGFPSGTKAAAAGGITTLIDMPLNSDPST--IST--------ETLKL 152 (507)
Q Consensus 99 GfID~H~H~~~~~~~----------------~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~--~~~--------~~~~~ 152 (507)
.+||+|+|+...... ...+.......+-+.||...+..+. .|.. ... ..-..
T Consensus 2 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~--~~~~~~~~~~~~~~~~~~~n~~ 79 (307)
T 2f6k_A 2 SKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILSLS--SPHVNFGDKAETIRLVEAANDD 79 (307)
T ss_dssp CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEECC--SSCSCSSCHHHHHHHHHHHHHH
T ss_pred CeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEeCC--CcccccCCHHHHHHHHHHHHHH
Confidence 379999998653210 1134566677788999999776531 1211 111 11111
Q ss_pred HHHHHhcCceeeEEEeccccCCC-cccHHHHHHHHH-cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 010547 153 KVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (507)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 230 (507)
..+....... .+...+.+.... +...++++++.+ .|..+++......+ .....+.+..+++.|.++++++.+|
T Consensus 80 ~~~~~~~~p~-r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~----~~~~~~~~~~~~~~a~~~~lpv~iH 154 (307)
T 2f6k_A 80 GKSLAQQYPD-QLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRG----LYFGSPVLERVYQELDARQAIVALH 154 (307)
T ss_dssp HHHHHHHCTT-TEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHhCcc-ceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCC----CCCCcHhHHHHHHHHHHcCCeEEEC
Confidence 2222221111 122222222122 345677777774 69999977543211 1234578999999999999999999
Q ss_pred cCCc
Q 010547 231 AEME 234 (507)
Q Consensus 231 ~~~~ 234 (507)
+...
T Consensus 155 ~~~~ 158 (307)
T 2f6k_A 155 PNEP 158 (307)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8643
No 95
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=97.40 E-value=0.0014 Score=63.47 Aligned_cols=160 Identities=13% Similarity=0.039 Sum_probs=92.5
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (507)
.++.|+...-.. .+.|....+.+..+++.|++.|.++.+|+.+... ..
T Consensus 172 ~~vvG~dL~g~E---~~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~~~-----------------------------~~ 219 (367)
T 3iar_A 172 QTVVAIDLAGDE---TIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGS-----------------------------AE 219 (367)
T ss_dssp TTEEEEEEESCT---TSTTGGGCHHHHHHHHHHHHHTCEEEEEESSSSC-----------------------------HH
T ss_pred CCEEEEcCCCcc---cCCCcchHHHHHHHHHHHHHcCCeeEEecCCcCC-----------------------------hH
Confidence 567777763211 1111101268899999999999999999954321 11
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
.+...+..+ +. -.+.|........+.++.+++.++.+. +||..-.... . .+.+
T Consensus 220 ~i~~al~~l----------g~-~RIgHgv~l~~d~~l~~~l~~~~i~le--~cP~SN~~l~-----~------~~~~--- 272 (367)
T 3iar_A 220 VVKEAVDIL----------KT-ERLGHGYHTLEDQALYNRLRQENMHFE--ICPWSSYLTG-----A------WKPD--- 272 (367)
T ss_dssp HHHHHHHTS----------CC-SEEEECGGGGGCHHHHHHHHHTTCEEE--ECHHHHHHTS-----S------SCTT---
T ss_pred HHHHHHHcc----------CC-ceeeeeeeecCCHHHHHHHHhCCcEEE--ECHHHHHHhC-----C------CCCc---
Confidence 222333211 21 136777654234567888888887654 4774211110 0 0011
Q ss_pred hhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHH
Q 010547 348 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKL 426 (507)
Q Consensus 348 ~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gls~~~al~~~T~n~A~~ 426 (507)
...++.++++.|++++++||....... .+...+..+ ...|+++++ ++.+|.|++++
T Consensus 273 -~~hPi~~ll~~Gv~v~l~TDdp~~~~~---------------------~l~~e~~~a~~~~glt~~e-l~~l~~nsi~~ 329 (367)
T 3iar_A 273 -TEHAVIRLKNDQANYSLNTDDPLIFKS---------------------TLDTDYQMTKRDMGFTEEE-FKRLNINAAKS 329 (367)
T ss_dssp -SCCHHHHHHHTTCCEEECCBSHHHHTC---------------------CHHHHHHHHHHHHCCCHHH-HHHHHHHHHHT
T ss_pred -ccChHHHHHHCCCEEEECCCCccccCC---------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHH
Confidence 112567889999999999996532110 033333333 456999999 66678999987
Q ss_pred hCC
Q 010547 427 AGQ 429 (507)
Q Consensus 427 lgl 429 (507)
..+
T Consensus 330 sf~ 332 (367)
T 3iar_A 330 SFL 332 (367)
T ss_dssp SSS
T ss_pred hCC
Confidence 766
No 96
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=97.34 E-value=0.02 Score=53.66 Aligned_cols=231 Identities=9% Similarity=-0.009 Sum_probs=124.5
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCCCC--CCHHHHHHHHHHHhcCceeeEEEeccccCCC-cccHHHHHHHHHcCCcEEE
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLK 194 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~ 194 (507)
.......+-+.||...+..+.. .+.. ...+.+.+..+...++ +...+++.... +...++++++...|..|++
T Consensus 49 ~e~~l~~md~~GV~~~V~~~~~-~~~~~~~~N~~~~~~~~~~p~r----~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~ 123 (291)
T 3irs_A 49 LELMFEEMAAAGIEQGVCVGRN-SSVLGSVSNADVAAVAKAYPDK----FHPVGSIEAATRKEAMAQMQEILDLGIRIVN 123 (291)
T ss_dssp HHHHHHHHHHTTCCEEEEECCE-ETTTEECCHHHHHHHHHHSTTT----EEEEEECCCSSHHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCC-ccccccccHHHHHHHHHHCCCc----EEEEEecCccCHHHHHHHHHHHHhCCCeEEE
Confidence 4455667788999988866411 1111 2344444443322222 22223344443 3456777776678999999
Q ss_pred EcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHHHHHHHHH
Q 010547 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 274 (507)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 274 (507)
.+....+ .......+.+..+++.|.+++++|.+|+..... .. ..... ...+..
T Consensus 124 ~~~~~~~--~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~-------------~~---------~~~~~---p~~~~~ 176 (291)
T 3irs_A 124 LEPGVWA--TPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAG-------------PD---------ITYTN---PEHIDR 176 (291)
T ss_dssp ECGGGSS--SCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCS-------------SS---------GGGGC---HHHHHH
T ss_pred EeCCCCC--CCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCC-------------CC---------CccCC---HHHHHH
Confidence 8643211 011346678999999999999999999954310 00 00000 123444
Q ss_pred HHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHH
Q 010547 275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLW 354 (507)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 354 (507)
++++ .+..++.+.|+... ...+.++.+.+. -++.+.++... ...| . ...+.
T Consensus 177 v~~~------~P~l~ivl~H~G~~-~~~~~~~l~~~~-~nvy~~~Sg~~---------------~~~~---~---~~~~~ 227 (291)
T 3irs_A 177 VLGD------FPDLTVVSSHGNWP-WVQEIIHVAFRR-PNLYLSPDMYL---------------YNLP---G---HADFI 227 (291)
T ss_dssp HHHH------CTTCCEEEEGGGTT-CHHHHHHHHHHC-TTEEEECGGGG---------------SSST---T---HHHHH
T ss_pred HHHH------CCCCEEEeecCCcc-cHHHHHHHHhHC-CCeEecHHHHh---------------ccCC---C---HHHHH
Confidence 5554 34778889998753 333333333221 12333322100 0001 1 12233
Q ss_pred HHHhc-C-CeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CC
Q 010547 355 EALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VS 431 (507)
Q Consensus 355 ~~l~~-G-~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl-~~ 431 (507)
+.++. | -.+.+|||+.-... ........+.+++.++.-+..+.|+++++++ .+
T Consensus 228 ~~~~~~g~drllfgSD~P~~~~------------------------~~~~~~~~~l~l~~e~~~~i~~~NA~rl~~~~~~ 283 (291)
T 3irs_A 228 QAANSFLADRMLFGTAYPMCPL------------------------KEYTEWFLTLPIKPDAMEKILHGNAERLLAQAGR 283 (291)
T ss_dssp HHHTTGGGGTBCCCCCBTSSCH------------------------HHHHHHHHTSSCCHHHHHHHHTHHHHHHHHHSCC
T ss_pred HHHHHhCcceEEEecCCCCCCH------------------------HHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcccc
Confidence 33332 2 24679999653321 1123334455899999999999999999998 43
Q ss_pred CC
Q 010547 432 KG 433 (507)
Q Consensus 432 ~G 433 (507)
-|
T Consensus 284 ~~ 285 (291)
T 3irs_A 284 EG 285 (291)
T ss_dssp --
T ss_pred cc
Confidence 34
No 97
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.003 Score=61.33 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=31.3
Q ss_pred cceeecccccCCCCCC--------CCCChhHHHHHHHhCCceEEEeCC
Q 010547 98 PGLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 98 PGfID~H~H~~~~~~~--------~~~~~~~~~~~~l~~GvTt~~~~~ 137 (507)
+-|||+|+|+....+. ..+++......+...||..++..+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g 59 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG 59 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec
Confidence 5799999999875432 235678888999999999998654
No 98
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=97.22 E-value=0.0018 Score=62.17 Aligned_cols=158 Identities=15% Similarity=0.059 Sum_probs=95.6
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHH
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 266 (507)
..++.|+...- .+ ...+++.+..+++.|++.|.++.+|+.+... .
T Consensus 162 ~~~vvG~dL~g-----~E-~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-----------------------------~ 206 (343)
T 3rys_A 162 HAPIAGIGLDS-----AE-VGNPPSKFERLYQRAAEAGLRRIAHAGEEGP-----------------------------A 206 (343)
T ss_dssp TCCCCEEEEES-----CC-TTCCGGGGHHHHHHHHHTTCEEEEEESSSSC-----------------------------H
T ss_pred CCCEEEEecCC-----cc-cCCCHHHHHHHHHHHHHCCCeEEEeeCCCCC-----------------------------H
Confidence 35677877632 11 1345678899999999999999999954321 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCC
Q 010547 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346 (507)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 346 (507)
..+...+.++ |. -.+.|.....+..+.++.+++.++.+.. ||..-.... . .+.
T Consensus 207 ~~i~~al~~l----------g~-~rIgHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~-------~----~~~--- 259 (343)
T 3rys_A 207 SYITEALDVL----------HV-ERIDHGIRCMEDTDVVQRLVAEQVPLTV--CPLSNVRLR-------A----VDK--- 259 (343)
T ss_dssp HHHHHHHHTS----------CC-SEEEECGGGGGCHHHHHHHHHHTCCEEE--CHHHHHHTT-------S----SSC---
T ss_pred HHHHHHHhcC----------Cc-ceeeeeeeecCChHHHHHHHhcCCCeeE--chhHHHHhC-------C----CCC---
Confidence 2233333321 11 1366776542335678888888877654 764211110 0 000
Q ss_pred hhhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhH
Q 010547 347 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAK 425 (507)
Q Consensus 347 ~~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~ 425 (507)
....++.+++++|++++++||...+.... +...+.. +...+++++++ +.++.|+++
T Consensus 260 -~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~---------------------l~~E~~~a~~~~~l~~~~l-~~l~~nsi~ 316 (343)
T 3rys_A 260 -LADHPLPEMLAIGLNVCVNSDDPAYFGGY---------------------VDDNFEQLVKVLEFSVPEQ-ATLAANSIR 316 (343)
T ss_dssp -GGGCSHHHHHHTTCCEEECCBSTTTTTCC---------------------HHHHHHHHHHHHCCCHHHH-HHHHHHHHH
T ss_pred -cccchHHHHHHCCCeEEEeCCCccccCCC---------------------HHHHHHHHHHHcCCCHHHH-HHHHHHHHH
Confidence 01124678889999999999976543321 3333333 34469999995 667899998
Q ss_pred HhCC
Q 010547 426 LAGQ 429 (507)
Q Consensus 426 ~lgl 429 (507)
+..+
T Consensus 317 ~sf~ 320 (343)
T 3rys_A 317 SSFA 320 (343)
T ss_dssp HSSS
T ss_pred HHCC
Confidence 8776
No 99
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=96.86 E-value=0.00084 Score=63.97 Aligned_cols=157 Identities=15% Similarity=0.059 Sum_probs=91.8
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (507)
.++.|+...- .+ ...+++.+.++++.|++.|.++.+|+.+... ..
T Consensus 160 ~~vvG~dL~g-----~E-~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-----------------------------~~ 204 (326)
T 3pao_A 160 DAFIAVGLDS-----SE-VGHPPSKFQRVFDRARSEGFLTVAHAGEEGP-----------------------------PE 204 (326)
T ss_dssp GGCSEEEEES-----CC-TTCCGGGGHHHHHHHHHTTCEECEEESSSSC-----------------------------HH
T ss_pred ccceeeCCCC-----CC-CCCCHHHHHHHHHHHHHcCCceeeecCCCCC-----------------------------HH
Confidence 3677776632 11 1245678899999999999999999954321 12
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
.+...++.+. . -.+.|.....+..+.++.+++.++.+.. ||..-.... . .+.
T Consensus 205 ~i~~al~~lg----------~-~rigHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~------~-----~~~---- 256 (326)
T 3pao_A 205 YIWEALDLLK----------V-ERIDHGVRAFEDERLMRRLIDEQIPLTV--CPLSNTKLC------V-----FDD---- 256 (326)
T ss_dssp HHHHHHHTTC----------C-SSEEECGGGGGCHHHHHHHHHHTCCEEE--CHHHHHHTT------S-----SSS----
T ss_pred HHHHHHhcCC----------C-ceeeeeeeecccHHHHHHHHHcCCeEEE--CchhHHHhC------C-----CCC----
Confidence 2333333211 1 1256665532335677888888877654 764211110 0 000
Q ss_pred hhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHH
Q 010547 348 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKL 426 (507)
Q Consensus 348 ~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~ 426 (507)
....++.+++++|++++++||...+... . +...+.. +...|++++++ +.+|.|++++
T Consensus 257 ~~~hPi~~ll~~Gv~V~l~TDdp~~~~~-~--------------------l~~e~~~a~~~~~l~~~~l-~~l~~nsi~~ 314 (326)
T 3pao_A 257 MSQHTILDMLERGVKVTVNSDDPAYFGG-Y--------------------VTENFHALQQSLGMTEEQA-RRLAQNSLDA 314 (326)
T ss_dssp GGGCCHHHHHHHTCCEEECCBSHHHHTC-C--------------------HHHHHHHHHHHHCCCHHHH-HHHHHHHHHT
T ss_pred cccChHHHHHHCCCeEEEeCCCcccCCC-C--------------------HHHHHHHHHHHcCCCHHHH-HHHHHHHHHH
Confidence 0112456788899999999996533211 1 3333333 34469999995 7788999887
Q ss_pred hCC
Q 010547 427 AGQ 429 (507)
Q Consensus 427 lgl 429 (507)
.-+
T Consensus 315 sf~ 317 (326)
T 3pao_A 315 RLV 317 (326)
T ss_dssp CC-
T ss_pred HHh
Confidence 554
No 100
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=95.81 E-value=0.024 Score=54.98 Aligned_cols=161 Identities=13% Similarity=0.042 Sum_probs=89.6
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHHHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (507)
.++.|+...- ++. ..++..+..+++.|++.|.++.+|+.+... | .+
T Consensus 180 ~~VvG~dL~g-----~E~-~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~------------------------p----~~ 225 (380)
T 4gxw_A 180 DEVAGIGIDY-----REN-DRPPELFWKAYRDARAAGFRTTAHAGEFGM------------------------P----WR 225 (380)
T ss_dssp TTBCEEEEES-----CCT-TCCGGGGHHHHHHHHHTTCEEEEEESCTTC------------------------C----HH
T ss_pred CCEEEEeecC-----CCC-CCCHHHHHHHHHHHHHcCCCeeeeccccCC------------------------c----hH
Confidence 4677887621 111 234567888999999999999999954221 1 12
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCCh
Q 010547 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347 (507)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 347 (507)
.+...++++. -. .+.|........++++.++++++.+.+ ||..-... ...|.. ..
T Consensus 226 ~i~~al~~lg---------a~--RIgHG~~~~~d~~L~~~l~~~~I~lEv--CP~SN~~l-----------~~v~~~-~~ 280 (380)
T 4gxw_A 226 NVETAVDLLH---------VD--RVDHGYTIVDNPELCARYAERGIVFTV--VPTNSYYL-----------RTLPPD-QW 280 (380)
T ss_dssp HHHHHHHTSC---------CS--EEEECGGGGGCHHHHHHHHHHTCEEEE--CTTCHHHH-----------HHSCTT-TH
T ss_pred HHHHHHHHcC---------Cc--ccccceeeccChHHHHHHHHhCceeEE--CCcchhhh-----------cccccc-cc
Confidence 3344444322 11 344544322456678888888876544 77321110 000000 00
Q ss_pred hhHHHHHHHHhcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHH
Q 010547 348 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKL 426 (507)
Q Consensus 348 ~~~~~~~~~l~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~gls~~~al~~~T~n~A~~ 426 (507)
...-++..+++.|++++++||...... ..+...+.. ....|++.+++.+ .+.|+.++
T Consensus 281 ~~~HP~~~l~~~Gv~vtinTDDp~~f~---------------------t~Ls~Ey~~~~~~~gls~~dl~~-l~~nsi~~ 338 (380)
T 4gxw_A 281 AERHPMRKMPGLGLKIHPNTDDPTLHK---------------------VNPSEAWELMFSHFGFTIADLKQ-FMLNGIDG 338 (380)
T ss_dssp HHHCGGGGTGGGTCEEEECCBSHHHHT---------------------CCHHHHHHHHHHTSCCCHHHHHH-HHHHHHHH
T ss_pred cccChHHHHHHCCCeEEECCCCchhhC---------------------CCHHHHHHHHHHHhCcCHHHHHH-HHHHHHHH
Confidence 111135677889999999999653211 013333333 4567999998766 55777766
Q ss_pred hCC
Q 010547 427 AGQ 429 (507)
Q Consensus 427 lgl 429 (507)
--+
T Consensus 339 sF~ 341 (380)
T 4gxw_A 339 AWV 341 (380)
T ss_dssp SSS
T ss_pred HcC
Confidence 544
No 101
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=95.54 E-value=0.28 Score=46.22 Aligned_cols=53 Identities=15% Similarity=0.278 Sum_probs=39.4
Q ss_pred ccHHHHHHHHH-cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 177 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
...+++++..+ .|..|++.+....+ ....++.+..+++.+.++|++|.+|+..
T Consensus 111 ~a~~el~r~~~~~G~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 111 SACKVISSIKDDENLVGAQIFTRHLG----KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESEETT----EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCceEeccCCCCC----CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 35678888864 78999987543211 2345677899999999999999999843
No 102
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=94.97 E-value=0.11 Score=47.63 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=27.3
Q ss_pred eeecccccCCCCCCCCCChh---HHHHHHHhCCceEEEeCC
Q 010547 100 LIDVHAHLDDPGRTEWEGFP---SGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~---~~~~~~l~~GvTt~~~~~ 137 (507)
+||.|+|...+......++. ..++.+.+.|++.+.-.+
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~ 41 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATP 41 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 68999999764322223344 478889999999998654
No 103
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=94.39 E-value=2.5 Score=37.99 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=28.2
Q ss_pred cceeecccccCCCC---CCCCCChhHHHHHHHhCCceEEEeCC
Q 010547 98 PGLIDVHAHLDDPG---RTEWEGFPSGTKAAAAGGITTLIDMP 137 (507)
Q Consensus 98 PGfID~H~H~~~~~---~~~~~~~~~~~~~~l~~GvTt~~~~~ 137 (507)
.|+||.|+|...+. ..+.+......+.+.+.|++.+.-.+
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~Td 45 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTS 45 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCC
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 46899999996542 22223344688899999999988654
No 104
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=94.35 E-value=0.19 Score=47.97 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=63.3
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCC--CCCCHH-------HHHHHHHHHhcCceeeEEEeccccCCCc-ccHHHHHHHHHc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDP--STISTE-------TLKLKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLNA 188 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 188 (507)
......+-+.||...+..+ .... .....+ .....+........-.+...+.+....+ ...++++++.+.
T Consensus 61 ~~~l~~m~~~GV~~~V~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~~~~~a~~el~~~~~~ 139 (334)
T 2hbv_A 61 AFRIEEMDAQGVDVQVTCA-TPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDLDLACKEASRAVAA 139 (334)
T ss_dssp HHHHHHHHHHTCSEEEEEE-CGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECC-CchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEecCccCHHHHHHHHHHHHHc
Confidence 4556677789999877554 1100 011221 1112222222221112333343444332 456778877777
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
|..|++...... + ...+++.+..+++.+.++++++.+|+..
T Consensus 140 g~~Gv~l~~~~~---~-~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 140 GHLGIQIGNHLG---D-KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp TCCCEEEESCBT---T-BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred CCeEEEECCCCC---C-CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 999987754321 1 2356788999999999999999999854
No 105
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=93.27 E-value=0.12 Score=53.96 Aligned_cols=99 Identities=13% Similarity=0.007 Sum_probs=57.7
Q ss_pred EecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCCChhhHHHHHHHHhcCCeeEEeCCCCCC
Q 010547 293 VHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (507)
Q Consensus 293 ~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~lgtD~~~~ 372 (507)
.|+........+++.+++.++.+.. ||..- ... .+.+. .-++.++++.|++++|+||....
T Consensus 542 gHGv~l~edp~Li~lla~~~I~vev--CP~SN------~kl-------~~~~~----~HPi~~ll~~Gv~VsLgTDdp~~ 602 (701)
T 2a3l_A 542 AHGINLRKSPVLQYLYYLAQIGLAM--SPLSN------NSL-------FLDYH----RNPFPVFFLRGLNVSLSTDDPLQ 602 (701)
T ss_dssp SCCGGGGGCHHHHHHHHHHTCCEEE--CHHHH------TTT-------TCCST----TCSHHHHHHTTCCEEECCBCHHH
T ss_pred EEEeecccCHHHHHHHHHcCCcEEE--Cccch------hhh-------ccCch----HhHHHHHHHCCCcEEEeCCCccc
Confidence 5554432334457777778877654 76321 100 00010 11356788999999999997644
Q ss_pred ChhhhccccCCccccCCCCchhhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 373 VPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
....+ .. |...+. .+...+++..++.++ |.|++++.++
T Consensus 603 ~~~t~-----------------~d-L~~Ey~~aa~~~~ls~~dl~~l-a~Ns~~asfl 641 (701)
T 2a3l_A 603 IHLTK-----------------EP-LVEEYSIAASVWKLSACDLCEI-ARNSVYQSGF 641 (701)
T ss_dssp HCCSS-----------------SH-HHHHHHHHHHHHTCCHHHHHHH-HHHHHHHSCC
T ss_pred cCCCC-----------------cC-HHHHHHHHHHHcCCCHHHHHHH-HHHHHHHhCC
Confidence 22100 00 222222 334457999997776 8999999998
No 106
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=93.07 E-value=0.2 Score=47.78 Aligned_cols=61 Identities=20% Similarity=0.133 Sum_probs=42.5
Q ss_pred ccccCCCc-ccHHHHHHHHH-cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 169 GGLVPENA-YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 169 ~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
+.+....+ ...++++++.+ .|..|++......+ ....++.+..+++.+.++++++.+|+..
T Consensus 115 ~~l~~~~~~~a~~el~~~~~~~g~~Gv~l~~~~~~----~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 115 GTLPMQAPELAVKEMERCVKELGFPGVQIGTHVNE----WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp ECCCTTSHHHHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred EeCCCcCHHHHHHHHHHHHHccCCeEEEECCcCCC----CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 33444332 35677888874 69999987432211 1346678999999999999999999854
No 107
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=92.77 E-value=7.2 Score=37.47 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=40.5
Q ss_pred cHHHHHHHHHc-CCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCc
Q 010547 178 NASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (507)
Q Consensus 178 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 234 (507)
..+++++..+. |..|++.+.... + ...+++.+..+++.+.++|++|.+|....
T Consensus 161 a~~EL~r~~~~~G~~Gv~l~~~~~---g-~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 161 SAREIHRGARELGFKGIQINSHTQ---G-RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHTSCCCCEEECSCBT---T-BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHhhcCceEEEECCCCC---C-CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 45788888875 999999753221 1 23566789999999999999999998643
No 108
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=92.06 E-value=0.75 Score=46.16 Aligned_cols=126 Identities=19% Similarity=0.139 Sum_probs=69.6
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHHHH--HHhcCCcEEEecCCcccchhhhhcccCcCCccccccccCCCChhHH
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSV--LARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 265 (507)
.++.|+...- .+....++..+..+++. |++.|+++.+|+.+.... + ..+
T Consensus 291 ~~VvG~DLaG-----~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~-----------g---------~~~---- 341 (508)
T 3lgd_A 291 TVVAGFDLVG-----HEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQ-----------G---------TSI---- 341 (508)
T ss_dssp TTEEEEEEES-----CTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCC-----------S---------STT----
T ss_pred CceEEeccCC-----CCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCC-----------C---------CCc----
Confidence 4677777621 11112235667777777 888999999999543210 0 000
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEecccccccccccCCCCCCCceeEcCCCC
Q 010547 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 345 (507)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 345 (507)
.+.+...+.+..+ .+.|........++++.+++.++.+.. ||..-.... . .+.
T Consensus 342 ~~~i~~Al~Lga~------------RIgHGv~l~~dp~l~~~l~~~~I~lev--CP~SN~~l~------~-----v~~-- 394 (508)
T 3lgd_A 342 DRNILDALMLNTT------------RIGHGFALSKHPAVRTYSWKKDIPIEV--CPISNQVLK------L-----VSD-- 394 (508)
T ss_dssp TTHHHHHHHTTCS------------SEEECTTGGGCHHHHHHHHHTTCCEEE--CHHHHHHTT------S-----CSS--
T ss_pred HHHHHHHHhcCCc------------eeeeeEecCccHHHHHHHHhcCCeEEE--CcchHHHhC------C-----CCC--
Confidence 1123344432111 256766543345778888888887655 663211110 0 000
Q ss_pred ChhhHHHHHHHHhcCCeeEEeCCCCC
Q 010547 346 DAANKEKLWEALMDGHIDMLSSDHSP 371 (507)
Q Consensus 346 ~~~~~~~~~~~l~~G~~~~lgtD~~~ 371 (507)
....++.++++.|++++++||...
T Consensus 395 --~~~hP~~~ll~~Gv~V~l~TDdp~ 418 (508)
T 3lgd_A 395 --LRNHPVATLMATGHPMVISSDDPA 418 (508)
T ss_dssp --GGGCTHHHHHHTTCCEEECCBSHH
T ss_pred --cccChHHHHHHCCCcEEEcCCCcc
Confidence 011245678889999999999653
No 109
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=88.21 E-value=2.1 Score=41.00 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=40.7
Q ss_pred ccHHHHHHHH-HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCc
Q 010547 177 YNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (507)
Q Consensus 177 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 234 (507)
...+++++.. +.|..|++.+.... ....+++.+..+++.+.++|++|.+|+...
T Consensus 142 ~a~~El~r~~~~~G~~Gv~l~~~~~----~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 142 AAAREFERCINDLGFKGALIMGRAQ----DGFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHTTCCCCEEEESCBT----TBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHhhcCceEEEeCCCCC----CCCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 3567888865 58999998863221 123566789999999999999999998653
No 110
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=68.93 E-value=73 Score=32.44 Aligned_cols=35 Identities=14% Similarity=-0.071 Sum_probs=27.6
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeC
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 136 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~ 136 (507)
++|.|+|...+ .....+....+.+.+.|++.+.-.
T Consensus 328 ~~DlH~HT~~S--DG~~t~eemv~~A~~~Gl~~IaiT 362 (578)
T 2w9m_A 328 RGMIHTHSTWS--DGGASIREMAEATLTLGHEFLGTA 362 (578)
T ss_dssp CEEEEECCTTT--TCSSCHHHHHHHHHHTTCSEEEEC
T ss_pred ceEEEecCCcc--CCCCCHHHHHHHHHHCCCeEEEEc
Confidence 58999999776 244567788899999999987654
No 111
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=56.08 E-value=41 Score=31.62 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=42.2
Q ss_pred cccHHHHHHHH-HcCCcEEEEcccCCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 176 AYNASALEALL-NAGVLGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 176 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
+...++++++. +.|..|++......+.. ......++.+..+++.|.+++++|.+|+..
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~ 181 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVST 181 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCC
Confidence 45678888887 57999997754322111 113456788999999999999999999854
No 112
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=51.71 E-value=64 Score=31.38 Aligned_cols=116 Identities=12% Similarity=-0.027 Sum_probs=67.6
Q ss_pred hhHHHHHHHhCCceEEEeCCCCCCC-----CCCCHHHH-------HHHHHHHhc-Cce-eeEEEeccccCCC-cccHHHH
Q 010547 118 FPSGTKAAAAGGITTLIDMPLNSDP-----STISTETL-------KLKVDAAEK-RIY-VDVGFWGGLVPEN-AYNASAL 182 (507)
Q Consensus 118 ~~~~~~~~l~~GvTt~~~~~~~~~p-----~~~~~~~~-------~~~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~ 182 (507)
.....+.|-+.||...+..+ .... .....+.. ...+..... ... -.+...+.+.... ....+++
T Consensus 103 ~e~rl~~MD~~GId~~Vl~p-~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v~~~d~~~a~~EL 181 (423)
T 4dzi_A 103 RDARIAVMDEQDIETAFMLP-TFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEV 181 (423)
T ss_dssp HHHHHHHHHHHTEEEEEEEC-SGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBCCCSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECC-CchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCCccCHHHHHHHH
Confidence 55667778889999887664 1100 01222221 222221111 111 2333333333232 3466888
Q ss_pred HHHHHcCCcEEEEcccCC-CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCc
Q 010547 183 EALLNAGVLGLKSFMCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (507)
Q Consensus 183 ~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 234 (507)
++..+.|..|++....+. +..+....+++.+..+++.+.++|++|.+|....
T Consensus 182 ~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 182 DFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 888889999998753211 1122345667889999999999999999998654
No 113
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=49.59 E-value=23 Score=30.73 Aligned_cols=52 Identities=15% Similarity=-0.010 Sum_probs=38.3
Q ss_pred hcCCeeEEeCCCCCCChhhhccccCCccccCCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 358 MDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 358 ~~G~~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
+.|+++.++||......-. . .......+...|++.+++..+.|.+|.+++..
T Consensus 158 ~~g~~ivisSDAh~~~~v~----------------~----~~~~~~l~~~~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 158 KYKVRRFLTSSAQEKWDVR----------------Y----PRDLISLGVVIGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp HHTCCEEEECCCSSGGGCC----------------C----HHHHHHHHHHTTCCHHHHHHTTTHHHHHHHC-
T ss_pred hcCCCEEEeCCCCChhhcC----------------C----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 3499999999976332111 1 34445667789999999999999999998864
No 114
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=45.10 E-value=1.8e+02 Score=26.97 Aligned_cols=31 Identities=13% Similarity=-0.003 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 010547 398 LPVTWSYGRKYGVTLEQLASWWSERPAKLAG 428 (507)
Q Consensus 398 l~~~~~~~~~~gls~~~al~~~T~n~A~~lg 428 (507)
++.+.....+.|+|.+++-+++-.|..|.+.
T Consensus 290 ~~~l~~~L~~~G~se~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 290 FPNLTETLLKRGMPERVVRKVMGENWVRVLR 320 (325)
T ss_dssp THHHHHHHHHTTCCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 4555666778899999999999999998874
No 115
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=42.76 E-value=1.7e+02 Score=25.66 Aligned_cols=108 Identities=13% Similarity=-0.014 Sum_probs=64.3
Q ss_pred cHHHHHHHHHcCCcEEEEcccCCCC---CC---CCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcccCcCCcc
Q 010547 178 NASALEALLNAGVLGLKSFMCPSGI---ND---FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (507)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~---~~---~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 251 (507)
..+.++...+.|..++..+...... .+ ....+++.+.++.+.++++|+.+..+.....
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~---------------- 87 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVA---------------- 87 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECC----------------
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCC----------------
Confidence 4456677778888888875422100 00 1235677888888888999988877752110
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCCEEEeccc
Q 010547 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP 321 (507)
Q Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~~~~~~~i~~~~~~g~~i~~~~~~ 321 (507)
. ....+.+.++.+.+. |.+....|.... .-....+.+++.|+.+..+..+
T Consensus 88 -------~-----~~~~~~~~i~~A~~l-------Ga~~v~~~~~~~-~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 88 -------E-----KSSDWEKMFKFAKAM-------DLEFITCEPALS-DWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp -------S-----STTHHHHHHHHHHHT-------TCSEEEECCCGG-GHHHHHHHHHHHTCEEEEECCS
T ss_pred -------c-----cHHHHHHHHHHHHHc-------CCCEEEecCCHH-HHHHHHHHHHHhCCEEEEEeCC
Confidence 0 112356777777765 666666665432 3334455556678777666443
No 116
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=40.41 E-value=1.7e+02 Score=26.85 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=61.5
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHH----HHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHc
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK----LKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (507)
+.+.+....+..+.+|+..++..+.......-+.+.-. ...+...++..+-.+ ... ...+..+..+...+.
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG----vg~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAG----VGTNNTRTSVELAEAAASA 110 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE----CCCSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEec----CCCCCHHHHHHHHHHHHhc
Confidence 44556777888899999999877522222223333222 233333333332222 222 223455666777788
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
|+.++-... +.+...+.+.+.+-+ ..|+..+.|+.+..
T Consensus 111 Gadavlv~~-----P~y~~~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 111 GADGLLVVT-----PYYSKPSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp TCSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 998886642 122234666666655 55666788988865
No 117
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=39.25 E-value=1.6e+02 Score=26.85 Aligned_cols=110 Identities=12% Similarity=0.136 Sum_probs=61.0
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHH----HhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA----AEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+.+|+..++..++......-+.+.-.+..+. ..++..+-.+. ......+..+..+...+.|
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---LVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCccHHHHHHHHHHHHhcC
Confidence 3445667788889999999987752222222333333333332 22333322221 1122234556667777789
Q ss_pred CcEEEEcccCCCCCCCCC-CCHHHHHHHH-HHHHhc---CCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPM-TNASHIKEGL-SVLARY---KRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~a~~~---~~~v~~H~ 231 (507)
+.++-... +.+.. .+.+.+.+.+ ..|+.. ++|+.+..
T Consensus 99 adavlv~~-----P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 99 ARNILLAP-----PSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp CSEEEECC-----CCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred CCEEEEcC-----CcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 99886632 22223 4667766665 445556 88988875
No 118
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=39.10 E-value=1.4e+02 Score=27.10 Aligned_cols=108 Identities=14% Similarity=0.151 Sum_probs=60.6
Q ss_pred CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcC
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAG 189 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 189 (507)
.+.+....+..+.+|+..++..++......-+.+.- +...+...++..+-.+ ... ...+..+..+...+.|
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG----vg~~~t~~ai~la~~A~~~G 95 (294)
T 2ehh_A 20 YEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAG----TGGNATHEAVHLTAHAKEVG 95 (294)
T ss_dssp HHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE----CCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe----cCCCCHHHHHHHHHHHHhcC
Confidence 344667788889999999987752222222233322 2333333333332222 222 2234556667777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ ..|+..+.|+.+..
T Consensus 96 adavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 96 ADGALVVV-----PYYNKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886632 222234667766655 45666789988875
No 119
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=38.66 E-value=73 Score=29.50 Aligned_cols=109 Identities=18% Similarity=0.229 Sum_probs=63.0
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHH----HHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..++.|+..++..++......-+.+ .++...+...++..+-.+. + ....+..+..+...+.|
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g--~~t~~ai~la~~A~~~G 106 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--G--YATSTAIELGNAAKAAG 106 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--C--SSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--C--cCHHHHHHHHHHHHhcC
Confidence 34456677888899999999877522122222233 3333334444444433332 2 23344556667777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 107 adavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 107 ADAVMIHM-----PIHPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp CSEEEECC-----CCCSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred CCEEEEcC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 98887632 222345677766655 45566689988875
No 120
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=38.50 E-value=1.7e+02 Score=27.73 Aligned_cols=182 Identities=12% Similarity=0.050 Sum_probs=98.7
Q ss_pred cHHHHHHHHHcCCcEEEEcccCCCC--CC-----------CCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcc
Q 010547 178 NASALEALLNAGVLGLKSFMCPSGI--ND-----------FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244 (507)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~--~~-----------~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 244 (507)
..+.++.+.+.|++.+..-...... ++ ....+ +.=+++++...++|+.+.+-.-+
T Consensus 133 ~l~~L~~~y~lGvR~~~Lthn~~N~~a~~~~~~~~~~~~~~~GLT-~~G~~vV~emnrlGmivDlSH~s----------- 200 (369)
T 1itu_A 133 SLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLS-PFGQRVVKELNRLGVLIDLAHVS----------- 200 (369)
T ss_dssp CHHHHHHHHHTTEEEEESCSSSCCSSBCBGGGGGTSSCCSSSSBC-HHHHHHHHHHHHHTCEEECTTBC-----------
T ss_pred CHHHHHHHHHcCCeEEEeecccCCcccccccccCCCCcccCCCcC-HhHHHHHHHHHHcCCEEEcCCCC-----------
Confidence 4678889999998877662211100 00 01122 34566777888888887663311
Q ss_pred cCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-------hHHHHHHHHHHhCCCCEEE
Q 010547 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-------SSSLDLLMEAKTNGDSITV 317 (507)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~~-------~~~~~~i~~~~~~g~~i~~ 317 (507)
. ..+.++++-. ..++.+.|.... +-+.++++.+.+.|.-+..
T Consensus 201 ---------------------~---~~~~dvl~~s-------~~PviaSHSn~ral~~h~RNl~De~l~~la~~GGvigv 249 (369)
T 1itu_A 201 ---------------------V---ATMKATLQLS-------RAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMV 249 (369)
T ss_dssp ---------------------H---HHHHHHHHHC-------SSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEEEE
T ss_pred ---------------------H---HHHHHHHHhc-------CCCEEEeCCChhhcCCCCCCCCHHHHHHHHHcCCeEEE
Confidence 1 2233333322 456788887632 2345677777777765655
Q ss_pred ecccccccccccCCCCCCCceeEcCCCCC-hhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhh
Q 010547 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRD-AANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395 (507)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (507)
..++..+.-. . .+.+.. ....+.+.+.. |+ .++||||...... .+.++..+.
T Consensus 250 ~~~~~fl~~~--------~----~~t~~~~~~hi~hi~~~~--G~dhVgiGsDfdG~~~------------~p~gl~d~~ 303 (369)
T 1itu_A 250 NFYNNYISCT--------N----KANLSQVADHLDHIKEVA--GARAVGFGGDFDGVPR------------VPEGLEDVS 303 (369)
T ss_dssp CCCHHHHTSS--------S----CCBHHHHHHHHHHHHHHH--CGGGEEECCCTTSCSC------------CCBTCSSTT
T ss_pred EechhhcCCC--------C----CCCHHHHHHHHHHHHHhh--CCCeEEECCCCCCCCC------------CCCCCCCHH
Confidence 4444322110 0 000000 01112222222 54 4899999632110 111222222
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 396 FVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 396 ~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
.++.+.....+.|+|.+++-+++-.|..|.+..
T Consensus 304 -~~p~l~~~L~~~G~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 304 -KYPDLIAELLRRNWTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp -CHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHH
T ss_pred -HHHHHHHHHHHcCCCHHHHHHHHhHhHHHHHHH
Confidence 156666677789999999999999999999875
No 121
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=38.44 E-value=1.3e+02 Score=27.33 Aligned_cols=108 Identities=14% Similarity=0.193 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH----HHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcC
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAG 189 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 189 (507)
.+.+....+..+.+|+..++..++......-+.+.-.+ ..+...++..+-.+ ... ...+..+..+...+.|
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG----vg~~~t~~ai~la~~a~~~G 95 (289)
T 2yxg_A 20 FDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAG----AGSNCTEEAIELSVFAEDVG 95 (289)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE----CCCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe----CCCCCHHHHHHHHHHHHhcC
Confidence 34566778888999999998775222222223332222 33333333332222 222 2234456666777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ ..|+..+.|+.+..
T Consensus 96 adavlv~~-----P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 96 ADAVLSIT-----PYYNKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886642 222234667766655 55666789988875
No 122
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=37.95 E-value=1.9e+02 Score=26.42 Aligned_cols=110 Identities=13% Similarity=0.181 Sum_probs=61.9
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHH----HHHHHHhc-CceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK----LKVDAAEK-RIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
+.+.+....+..+.+|+..++..++......-+.+.-. ...+...+ +..+-.+. ......+..+..+...+.
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---g~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---GSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---CCSSHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---CCCCHHHHHHHHHHHHHc
Confidence 33456777888899999999887522222222333322 33333333 33322221 112333455667777788
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
|+.++-... +.+...+.+.+.+.+ ..|+..+.|+.+..
T Consensus 103 Gadavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 103 GADGILSVA-----PYYNKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp TCSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEEcC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 998886642 112234666666655 55666789998875
No 123
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=36.09 E-value=2.2e+02 Score=24.99 Aligned_cols=106 Identities=14% Similarity=0.066 Sum_probs=63.5
Q ss_pred CCCCCCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCc---ccHHHHHHH
Q 010547 109 DPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA---YNASALEAL 185 (507)
Q Consensus 109 ~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 185 (507)
..+..+.+++...+..+.++|+.+++..+ ..+ ...+...+...+.+....++..... ....+.++.
T Consensus 29 L~p~~t~~~i~~l~~~a~~~~~~aVcv~p----------~~v-~a~~~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~A 97 (234)
T 1n7k_A 29 LSPRATEEDVRNLVREASDYGFRCAVLTP----------VYT-VKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTV 97 (234)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTCSEEEECH----------HHH-HHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCEEEEch----------HHh-eeehHhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHH
Confidence 34556677889999999999999998554 222 2222222210234443334432222 244678888
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEE
Q 010547 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228 (507)
Q Consensus 186 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 228 (507)
.+.|+..+...+....... .-.+++.++.+.+++++.++-
T Consensus 98 v~~GAdEID~vinig~~~~---~v~~ei~~v~~a~~~~g~~lK 137 (234)
T 1n7k_A 98 LEAGATELDVVPHLSLGPE---AVYREVSGIVKLAKSYGAVVK 137 (234)
T ss_dssp HHHTCCEEEECCCGGGCHH---HHHHHHHHHHHHHHHTTCEEE
T ss_pred HHcCCCEEEEeccchHHHH---HHHHHHHHHHHHHhhcCCeEE
Confidence 8999999988654432111 234567777777887777653
No 124
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=35.73 E-value=2.4e+02 Score=25.98 Aligned_cols=110 Identities=9% Similarity=0.105 Sum_probs=61.9
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHH----HHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+..|+..++..+.......-+.+ .++...+...++..+-.+. ......+..+..+...+.|
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---SDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhcC
Confidence 33456677888899999999877522222222233 2333333334443333221 1122334556667777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ ..|+..++|+.+..
T Consensus 120 adavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 120 AEAVMVLP-----ISYWKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp CSEEEECC-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 98886632 222234666666655 55666789998875
No 125
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.41 E-value=2.7e+02 Score=25.77 Aligned_cols=110 Identities=11% Similarity=0.020 Sum_probs=61.7
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+.+|+..++..+.......-+.+. ++...+...++..+-.+. ......+..+..+...+.|
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---GALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---CCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhcC
Confidence 344566778888999999998775222222223332 233333334443333222 1122234456666777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 130 adavlv~~-----P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 130 ADALLLAP-----VSYTPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp CSEEEECC-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886632 222235667666655 55666789988875
No 126
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=34.94 E-value=1.1e+02 Score=28.30 Aligned_cols=109 Identities=11% Similarity=0.148 Sum_probs=61.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+.+|+..++..++......-+.+. ++...+...++..+-.+ ......+..+..+...+.|
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG----vg~st~~ai~la~~A~~~G 106 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAG----IGYSVDTAIELGKSAIDSG 106 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE----ECSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEec----CCcCHHHHHHHHHHHHHcC
Confidence 444566778888999999998775211222222332 23333333444333322 2223334556667777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 107 adavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 107 ADCVMIHQ-----PVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp CSEEEECC-----CCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99886632 222234666666655 55666789988876
No 127
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=34.46 E-value=2.7e+02 Score=27.33 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=62.4
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccC--CCcccHHHHHHHHHcCCcEEEE
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVP--ENAYNASALEALLNAGVLGLKS 195 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~ 195 (507)
....+.++.+|+..+.-+. . .+..+.+....+.+.. +..+.+........ ..+...+..+++.+.|+..+..
T Consensus 103 ~~~v~~a~~~Gvd~i~if~-~----~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l 177 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFD-A----MNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIAL 177 (464)
T ss_dssp HHHHHHHHHTTCCEEEECC-T----TCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCcCEEEEEE-e----cCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 3446678899999888663 1 1223455555555543 23333332111111 1122345566777889876655
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCCccc
Q 010547 196 FMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 236 (507)
- +.....+|..+.++++..++ .+.++.+|+++...
T Consensus 178 ~------DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~G 213 (464)
T 2nx9_A 178 K------DMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAG 213 (464)
T ss_dssp E------ETTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTS
T ss_pred c------CCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 2 22346788888888877655 58999999987554
No 128
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=34.36 E-value=1.4e+02 Score=27.26 Aligned_cols=107 Identities=9% Similarity=0.010 Sum_probs=59.2
Q ss_pred CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcCC
Q 010547 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGV 190 (507)
Q Consensus 116 ~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~ 190 (507)
+.+....+..+..|+..++..++......-+.+.- +...+...++..+-.+ ... ...+..+..+...+.|+
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG----vg~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAH----VGCVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE----CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe----cCCCCHHHHHHHHHHHHhCCC
Confidence 34566777888999999988752222222333332 2333333333332222 222 22344566667777899
Q ss_pred cEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcC-CcEEEec
Q 010547 191 LGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYK-RPLLVHA 231 (507)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~-~~v~~H~ 231 (507)
.++-... +.+...+.+.+.+-+ ..|+..+ +|+.+..
T Consensus 108 davlv~~-----P~y~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 108 DAVSAVT-----PFYYPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp SEEEEEC-----CCSSCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEecC-----CCCCCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 8886632 222234677766655 4455556 8988875
No 129
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=34.35 E-value=2.4e+02 Score=25.74 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=62.0
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHH----HHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+..|+..++..+.......-+.+.-.+ ..+...++..+-.+. ......+..+..+...+.|
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---GTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---CCCCHHHHHHHHHHHHHcC
Confidence 445567778888999999998875222222223333333 333333443332221 1122334556667777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ ..++..++|+.+..
T Consensus 111 adavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 148 (304)
T 3l21_A 111 AHGLLVVT-----PYYSKPPQRGLQAHFTAVADATELPMLLYD 148 (304)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHHHHTSCSSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886632 112234667766655 45556689998875
No 130
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=34.30 E-value=1.9e+02 Score=26.39 Aligned_cols=109 Identities=11% Similarity=0.096 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHH----HHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCC
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK----LKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 190 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (507)
.+.+....+..+.+|+..++..++......-+.+.-. ...+...++..+-.+. ......+..+..+...+.|+
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 32 FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---GSNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---CCCCHHHHHHHHHHHHhcCC
Confidence 3446677778899999999877522222223333322 3333333433322221 11222345566677777899
Q ss_pred cEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 191 LGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 109 davlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 109 DAVMLVA-----PYYNKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp SEEEEEC-----CCSSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CEEEEcC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8886632 222234667766655 45666788988875
No 131
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=33.77 E-value=79 Score=29.14 Aligned_cols=107 Identities=12% Similarity=0.170 Sum_probs=59.5
Q ss_pred CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcCC
Q 010547 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGV 190 (507)
Q Consensus 116 ~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~ 190 (507)
+.+....+..+.+|+..++..++......-+.+. ++...+...++..+-.+ ... ...+..+..+...+.|+
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG----vg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVG----AGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE----CCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEc----CCCccHHHHHHHHHHHHhcCC
Confidence 4466677788899999998775222222223332 23333333333332222 222 22344566667777899
Q ss_pred cEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 191 LGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
.++-... +.+...+.+.+.+-+ ..|+..+.|+.+..
T Consensus 109 davlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 109 NGVLVVT-----PYYNKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp SEEEEEC-----CCSSCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred CEEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 8886632 222234667776665 44556688988875
No 132
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=33.15 E-value=2.7e+02 Score=25.07 Aligned_cols=106 Identities=13% Similarity=0.071 Sum_probs=59.8
Q ss_pred CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc--CceeeEEEeccccC-CCcccHHHHHHHHHcCCcE
Q 010547 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVP-ENAYNASALEALLNAGVLG 192 (507)
Q Consensus 116 ~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 192 (507)
+.+....+..+.+|+..++..++......-+.+.-.+..+.... .. +. .|... ...+..+..+...+.|+.+
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi--~Gvg~~~t~~ai~la~~A~~~Gada 93 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VI--VQVASLNADEAIALAKYAESRGAEA 93 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EE--EECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EE--EeeCCCCHHHHHHHHHHHHhcCCCE
Confidence 44667778889999999988752222222333333333333221 11 21 22222 2234556667777889998
Q ss_pred EEEcccCCCCCCCCC-CCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 193 LKSFMCPSGINDFPM-TNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+-... +.+.. .+.+.+.+.+ ..|+..++|+.+..
T Consensus 94 vlv~~-----P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 129 (286)
T 2r91_A 94 VASLP-----PYYFPRLSERQIAKYFRDLCSAVSIPVFLYN 129 (286)
T ss_dssp EEECC-----SCSSTTCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEcC-----CcCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 86632 22223 4667766655 45666789988875
No 133
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=32.25 E-value=26 Score=31.40 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=26.6
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEe
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
+||.|+|...+. .....+....+.+.+.|++.+.-
T Consensus 1 ~~DlH~Ht~~S~-DG~~~~ee~v~~A~~~Gl~~iai 35 (267)
T 2yxo_A 1 MVDSHVHTPLCG-HAEGHPEAYLEEARAKGLKGVVF 35 (267)
T ss_dssp CEEEEECCGGGS-SCCSCHHHHHHHHHHTTCSEEEE
T ss_pred CCccCcCcCCCC-CCCCCHHHHHHHHHHcCCCEEEE
Confidence 589999997652 23356778889999999997654
No 134
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=32.20 E-value=3.1e+02 Score=25.53 Aligned_cols=110 Identities=13% Similarity=0.137 Sum_probs=61.1
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+.+|+..++..++......-+.+.- +...+...++..+-.+. ......+..+..+...+.|
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---GGTNARETIELSQHAQQAG 126 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CSSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhcC
Confidence 3445667778889999999887752222222233322 33333333333322221 1122234556666777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 127 adavlv~~-----P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 127 ADGIVVIN-----PYYWKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp CSEEEEEC-----CSSSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886642 122234677766655 45666789988875
No 135
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=31.83 E-value=31 Score=30.39 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=26.3
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEe
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
++|.|+|...+. ....++....+.+.+.|++.+.-
T Consensus 3 ~~DlH~Ht~~Sd-~g~~~~~e~v~~A~~~Gl~~iai 37 (245)
T 1m65_A 3 PVDLHMHTVAST-HAYSTLSDYIAQAKQKGIKLFAI 37 (245)
T ss_dssp CEECCBCCTTST-TCCCCHHHHHHHHHHHTCCEEEE
T ss_pred ceEeCcCCCCCC-CCCCcHHHHHHHHHHCCCCEEEE
Confidence 689999997653 22335778888999999987654
No 136
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=31.14 E-value=2.9e+02 Score=25.10 Aligned_cols=108 Identities=13% Similarity=0.127 Sum_probs=59.9
Q ss_pred CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCc
Q 010547 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 191 (507)
Q Consensus 116 ~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (507)
+.+....+..+..|+..++..++......-+.+. ++...+...++..+-.+. ......+..+..+...+.|+.
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---GSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---CCCCHHHHHHHHHHHHhcCCC
Confidence 4466777888999999998775211222223332 233333333443322221 111223445666677778998
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 192 GLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 98 avlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 98 AVLCVA-----GYYNRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp EEEECC-----CTTTCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 886632 222234667766655 55666789988875
No 137
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=31.03 E-value=3e+02 Score=24.88 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=60.3
Q ss_pred CCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCC
Q 010547 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 190 (507)
Q Consensus 115 ~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (507)
.+.+....+..+.+|+..++..++......-+.+.- +...+...++..+-.+. ......+..+..+...+.|+
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 20 EVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---GSNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCccHHHHHHHHHHHHHcCC
Confidence 344667788889999999987752212222233322 33333333443332221 11122344566667777899
Q ss_pred cEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 191 LGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
.++-... +.+...+.+.+.+.+ ..|+..+.|+.+..
T Consensus 97 davlv~~-----P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 97 DGVLIVS-----PYYNKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp SEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 8886632 122234667766655 45666789998875
No 138
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=31.03 E-value=3e+02 Score=24.91 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=59.9
Q ss_pred CChhHHHHHHHhCCceEEEeCCCCCCCCCCCHH----HHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCc
Q 010547 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 191 (507)
Q Consensus 116 ~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (507)
+.+....+..+.+|+..++..+.......-+.+ .++...+...++..+-.+. ......+..+..+...+.|+.
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---GTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---CcccHHHHHHHHHHHHHcCCC
Confidence 346677788899999999887522222222233 2333333334443332221 122333455666777778998
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 192 GLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
++-... +.+...+.+.+.+.+ ..|+..++|+.+..
T Consensus 100 avlv~~-----P~y~~~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 100 AIMLIT-----PYYNKTNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp EEEEEC-----CCSSCCCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred EEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 886632 112234666666655 45566689988875
No 139
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=30.02 E-value=2.8e+02 Score=24.14 Aligned_cols=105 Identities=11% Similarity=-0.021 Sum_probs=61.3
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEc
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSF 196 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 196 (507)
++....+.+.+.|+..+--.. ...+.....+.+....+.++.....-...............+.++.....|+..+...
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKD-FHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECT-TTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEec-ccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEec
Confidence 477888889999999987654 2123334455555555555533221111111111111122233444455788777652
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 010547 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (507)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 233 (507)
...+.+.++.+.|+++|+.+.+|...
T Consensus 110 -----------p~~~~l~~l~~~a~~~gv~l~lEn~~ 135 (257)
T 3lmz_A 110 -----------PNYELLPYVDKKVKEYDFHYAIHLHG 135 (257)
T ss_dssp -----------ECGGGHHHHHHHHHHHTCEEEEECCC
T ss_pred -----------CCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 12478899999999999999998853
No 140
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=29.92 E-value=2.8e+02 Score=24.15 Aligned_cols=104 Identities=11% Similarity=-0.012 Sum_probs=61.9
Q ss_pred ChhHHHHHHHhCCceEEEeCCCCCC----------CCCCCHHHHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHH
Q 010547 117 GFPSGTKAAAAGGITTLIDMPLNSD----------PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (507)
Q Consensus 117 ~~~~~~~~~l~~GvTt~~~~~~~~~----------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (507)
++......+.+.|+..+--.. ... +...+.+......+.++.....-.................++...
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYP-GHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECT-TEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecC-CcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHH
Confidence 477788888999999987654 110 222345555555555554322111111112222223334555556
Q ss_pred HcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 010547 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (507)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 232 (507)
..|+..+... +..+.+.++.+.|+++|+.+.+|..
T Consensus 102 ~lGa~~v~~~-----------~~~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 102 AMDLEFITCE-----------PALSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HTTCSEEEEC-----------CCGGGHHHHHHHHHHHTCEEEEECC
T ss_pred HcCCCEEEec-----------CCHHHHHHHHHHHHHhCCEEEEEeC
Confidence 6788877662 1246778999999999999999885
No 141
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=29.52 E-value=37 Score=18.84 Aligned_cols=23 Identities=4% Similarity=-0.101 Sum_probs=19.2
Q ss_pred CCCHHHHHHHHHHHHhcCCcEEE
Q 010547 207 MTNASHIKEGLSVLARYKRPLLV 229 (507)
Q Consensus 207 ~~~~~~l~~~~~~a~~~~~~v~~ 229 (507)
.-++++++++-+.|++.++.+..
T Consensus 11 ggtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 11 GGTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCCHHHHHHHHHHHHHHCCCCCB
T ss_pred cCCHHHHHHHHHHHHhccEEEEe
Confidence 35899999999999999887643
No 142
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=29.42 E-value=3.3e+02 Score=24.92 Aligned_cols=110 Identities=13% Similarity=0.173 Sum_probs=61.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+..|+..++..++......-+.+. ++...+...++..+-.+. ......+..+..+...+.|
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---GANSTREAVALTEAAKSGG 118 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHHHcC
Confidence 334566777888999999998875222222223332 333333334443332221 1223334556677777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ ..|+..++|+.+..
T Consensus 119 adavlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 119 ADACLLVT-----PYYNKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred CCEEEEcC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886632 112234666666555 55666799998875
No 143
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=29.10 E-value=3.4e+02 Score=24.90 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=61.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHH----HHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+..|+..++..++......-+.+ .++...+...++..+-.+. ......+..+..+...+.|
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---GSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHHHhcC
Confidence 33456677788899999999877522222222233 2333333334443333221 1223334556667777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 118 adavlv~~-----P~y~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 118 ADAVLVVT-----PYYNRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEECC-----CCCCCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 98886632 112234666666555 55666789998875
No 144
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=27.03 E-value=3.4e+02 Score=24.63 Aligned_cols=110 Identities=12% Similarity=0.179 Sum_probs=62.4
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHH----HHHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+..|+..++..++......-+.+ .++...+...++..+-.+. ......+..+..+...+.|
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGV---ASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEE---EESSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHHHHcC
Confidence 34456677888899999998877522222222233 3333334444444333322 1223334556667777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-+ ..|+..++|+.+..
T Consensus 100 adavlv~~-----P~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 100 ADGILAIL-----EAYFPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp CSEEEEEE-----CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEEcC-----CCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 98886632 112234666666655 55666789998875
No 145
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.02 E-value=1.9e+02 Score=26.30 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=60.3
Q ss_pred CCCChhHHHHHHHh-CCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHH
Q 010547 114 EWEGFPSGTKAAAA-GGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLN 187 (507)
Q Consensus 114 ~~~~~~~~~~~~l~-~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 187 (507)
+.+.+....+..+. +|+..++..++......-+.+.- +...+...++..+-.+ ... ...+..+..+...+
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG----vg~~~t~~ai~la~~a~~ 97 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQ----VGSVNLKEAVELGKYATE 97 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE----CCCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe----cCCCCHHHHHHHHHHHHh
Confidence 33456677788899 99999987752222222233322 2333333333332222 222 22344566667777
Q ss_pred cCCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
.|+.++-... +.+...+.+.+.+.+ ..|+..+.|+.+..
T Consensus 98 ~Gadavlv~~-----P~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 98 LGYDCLSAVT-----PFYYKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp HTCSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCCCEEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 8998886642 222234666666655 45666688988875
No 146
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=26.60 E-value=3.6e+02 Score=24.32 Aligned_cols=110 Identities=8% Similarity=0.008 Sum_probs=62.5
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcCCcE
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLG 192 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 192 (507)
+.+.+....+..+.+|+..++..++......-+.+.-.+..+.......- ...|... ...+..+..+...+.|+.+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaGvg~~~t~~ai~la~~A~~~Gada 94 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQVGSLNLNDVMELVKFSNEMDILG 94 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEECCCSCHHHHHHHHHHHHTSCCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEeeCCCCHHHHHHHHHHHHhcCCCE
Confidence 33456677888899999999887522222233444444444444321110 2222222 2234556666777789988
Q ss_pred EEEcccCCCCCCCCC-CCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 193 LKSFMCPSGINDFPM-TNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+-... +.+.. .+.+.+.+-+ ..|+..+.|+.+..
T Consensus 95 vlv~~-----P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (288)
T 2nuw_A 95 VSSHS-----PYYFPRLPEKFLAKYYEEIARISSHSLYIYN 130 (288)
T ss_dssp EEECC-----CCSSCSCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEcC-----CcCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 86632 22223 4667666655 55666789998875
No 147
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=25.93 E-value=3.7e+02 Score=24.32 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=62.5
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
.+.+.+....+..+.+|+..++..++......-+.+.- +...+...++..+-.+. ......+..+..+...+.
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---GANNTVEAIALSQAAEKA 101 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHHHc
Confidence 34455677788889999999988752222222233332 33333334443332221 122333455666777788
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
|+.++-... +.+...+.+.+.+.+ ..|+..+.|+.+..
T Consensus 102 Gadavlv~~-----P~y~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 102 GADYTLSVV-----PYYNKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp TCSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCEEEECC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 998886632 112234566666655 55666789998875
No 148
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=25.80 E-value=3.9e+02 Score=24.45 Aligned_cols=110 Identities=7% Similarity=0.104 Sum_probs=60.7
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHH----HhcCceeeEEEeccccC-CCcccHHHHHHHHH
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA----AEKRIYVDVGFWGGLVP-ENAYNASALEALLN 187 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 187 (507)
.+.+.+....+..+.+|+..++..+.......-+.+.-.+..+. ..++..+-.+ ... ...+..+..+...+
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaG----vg~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAG----VGTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEE----CCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe----CCCcCHHHHHHHHHHHHh
Confidence 34456778888899999999888752222222333333333332 2333332222 222 22344555666667
Q ss_pred cCC-cEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 188 AGV-LGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 188 ~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
.|+ .++-... +.+...+.+.+.+.+ ..|+..++|+.+..
T Consensus 101 ~Ga~davlv~~-----P~y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 101 FGGFAAGLAIV-----PYYNKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp SCCCSEEEEEC-----CCSSCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred cCCCcEEEEcC-----CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 786 7775532 112234666666655 45566789998875
No 149
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=25.58 E-value=57 Score=29.83 Aligned_cols=35 Identities=23% Similarity=0.016 Sum_probs=27.4
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEeC
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 136 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~ 136 (507)
++|.|+|...+ .....+....+.+.+.|+..+.-.
T Consensus 3 ~~DLH~Ht~~S--Dg~~~~~elv~~A~~~Gl~~iaiT 37 (292)
T 2yb1_A 3 NIDLHFHSRTS--DGALTPTEVIDRAAARAPALLALT 37 (292)
T ss_dssp CEECCBCCTTT--TCSSCHHHHHHHHHTTCCSEEEEC
T ss_pred ccccccCCCcc--CCCCCHHHHHHHHHHCCCCEEEEe
Confidence 78999999865 233457788899999999987644
No 150
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=25.00 E-value=3.8e+02 Score=24.13 Aligned_cols=110 Identities=15% Similarity=0.184 Sum_probs=61.2
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+.+|+..++..++......-+.+. ++...+...++..+-.+. ......+..+..+...+.|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---GANSTREAIELTKAAKDLG 96 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---CCCCHHHHHHHHHHHHhcC
Confidence 334566777888999999998775222222222332 233333333443332221 1223334556667777889
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+.+ ..|+..++|+.+..
T Consensus 97 adavlv~~-----P~y~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 97 ADAALLVT-----PYYNKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEcC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 98886632 112234666666555 55666789998875
No 151
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=24.93 E-value=3.9e+02 Score=24.15 Aligned_cols=110 Identities=10% Similarity=0.034 Sum_probs=60.5
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHcCCcE
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLG 192 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 192 (507)
+.+.+....+..+.+|+..++..++......-+.+.-.+..+.......- + ..|... ...+..+..+...+.|+.+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-v--iaGvg~~~t~~ai~la~~A~~~Gada 94 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-I--IFQVGGLNLDDAIRLAKLSKDFDIVG 94 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-E--EEECCCSCHHHHHHHHHHGGGSCCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-E--EEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 33446677888899999999887522222233344444444433321110 2 222222 2233445556666788888
Q ss_pred EEEcccCCCCCCCCC-CCHHHHHHHH-HHHHhcCCcEEEec
Q 010547 193 LKSFMCPSGINDFPM-TNASHIKEGL-SVLARYKRPLLVHA 231 (507)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~~~~l~~~~-~~a~~~~~~v~~H~ 231 (507)
+-... +.+.. .+.+.+.+.+ ..|+..++|+.+..
T Consensus 95 vlv~~-----P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (293)
T 1w3i_A 95 IASYA-----PYYYPRMSEKHLVKYFKTLCEVSPHPVYLYN 130 (293)
T ss_dssp EEEEC-----CCSCSSCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEcC-----CCCCCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 76632 11223 4667666655 55666789988875
No 152
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=24.61 E-value=2.6e+02 Score=25.29 Aligned_cols=111 Identities=15% Similarity=0.175 Sum_probs=61.1
Q ss_pred CCCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHc
Q 010547 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 188 (507)
Q Consensus 113 ~~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (507)
.+.+.+....+..+.+|+..++..++......-+.+. ++...+...++..+-.+. ......+..+..+...+.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---g~~~t~~ai~la~~a~~~ 95 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---GSNNTAASIAMSKWAESI 95 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CcccHHHHHHHHHHHHhc
Confidence 3445567778888999999998775222222223332 233333333433322221 112223455666777778
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~~~~v~~H~ 231 (507)
|+.++-... +.+...+.+.+.+.++ .|+..+.|+.+..
T Consensus 96 Gadavlv~~-----P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 96 GVDGLLVIT-----PYYNKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TCSEEEEEC-----CCSSCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred CCCEEEEcC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 998886642 2222346777766654 4555688888875
No 153
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=24.37 E-value=2.7e+02 Score=26.26 Aligned_cols=109 Identities=11% Similarity=0.043 Sum_probs=59.4
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHH----HHHHHHHHhcCceeeEEEeccccCCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+++|+..++..+.......-+.+. ++...+...++..+-.+. ......+..+..+...+.|
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~~~G 154 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---GSNSTREAIHATEQGFAVG 154 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---CCCCHHHHHHHHHHHHHcC
Confidence 334566778888999999998875222222222332 233333333443322221 1122334556666777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 231 (507)
+.++-... +.+...+.+.+.+-++...+. .|+.+..
T Consensus 155 adavlvv~-----PyY~k~sq~gl~~hf~~IA~a-~PiilYN 190 (360)
T 4dpp_A 155 MHAALHIN-----PYYGKTSIEGLIAHFQSVLHM-GPTIIYN 190 (360)
T ss_dssp CSEEEEEC-----CCSSCCCHHHHHHHHHTTGGG-SCEEEEE
T ss_pred CCEEEEcC-----CCCCCCCHHHHHHHHHHHHHh-CCEEEEe
Confidence 98886632 122235777777776655554 5776654
No 154
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=24.37 E-value=1.9e+02 Score=27.27 Aligned_cols=185 Identities=15% Similarity=0.066 Sum_probs=101.2
Q ss_pred cHHHHHHHHHcCCcEEEEcccCCCC--CC-----------CCCCCHHHHHHHHHHHHhcCCcEEEecCCcccchhhhhcc
Q 010547 178 NASALEALLNAGVLGLKSFMCPSGI--ND-----------FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244 (507)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~--~~-----------~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 244 (507)
..+.++.+.+.|++.+..-...... ++ ....+ +.=++++++..++|+.+.+-.-+
T Consensus 147 ~l~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~~~~~~~GLT-~~G~~vV~emnrlGmivDlSH~s----------- 214 (364)
T 3ly0_A 147 DLDALHLFHSLGLRSLGPVWSRPTVFGHGVPFRFPGSPDTGEGLT-EAGRRLVAECNRLKIMLDLSHLN----------- 214 (364)
T ss_dssp TCHHHHHHHHHTEEEEESCSSSCBTTBCBCCCEESCCSCCSCCCC-HHHHHHHHHHHHHTCEEBCTTBC-----------
T ss_pred CHHHHHHHHHhCCeEEEeeccCCCccccccccccCCCCCCCCCCC-HHHHHHHHHHHHcCCEEEcCCCC-----------
Confidence 4577888888998877662211100 11 11223 23466777788889877652211
Q ss_pred cCcCCccccccccCCCChhHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC-------hhHHHHHHHHHHhCCCCEEE
Q 010547 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-------ASSSLDLLMEAKTNGDSITV 317 (507)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~h~~~-------~~~~~~~i~~~~~~g~~i~~ 317 (507)
. ..+.++++- +..++.+.|... .+-.-++++.+++.|--+..
T Consensus 215 ---------------------~---~t~~dvl~~-------s~~PviaSHSnaral~~h~RNl~De~l~ala~~GGvigv 263 (364)
T 3ly0_A 215 ---------------------E---KGFDDVARL-------SDAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVGL 263 (364)
T ss_dssp ---------------------H---HHHHHHHHH-------CSSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTTCEEEE
T ss_pred ---------------------H---HHHHHHHHh-------cCCCeEEeCCchhhcCCCCCCCCHHHHHHHHHcCcEEEE
Confidence 1 223333332 255788888762 22456778888888876666
Q ss_pred ecccccccccccCCCCCCCceeEcCCCCC-hhhHHHHHHHHhcCC-eeEEeCCCCCCChhhhccccCCccccCCCCchhh
Q 010547 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRD-AANKEKLWEALMDGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395 (507)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~G~-~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (507)
..++..+.-.. .. . ..+.+.. ....+.+.+.. |+ .++||||..... .+.++..+.
T Consensus 264 ~f~~~fl~~~~--~~--~----~~~tl~~~~~Hi~hi~~l~--G~dhVgiGsDfdG~~-------------~p~gl~d~s 320 (364)
T 3ly0_A 264 NFATSFLREDG--RR--S----AEMGWEPVLRHLDHLIDRL--GEDHVGMGSDFDGAT-------------IPQGIADVT 320 (364)
T ss_dssp CCCHHHHSTTC--CC--C----SCCCSHHHHHHHHHHHHHH--CTTSEEECCCBTTSC-------------CCTTTCSGG
T ss_pred eccHhhhcCCC--CC--C----CCCCHHHHHHHHHHHHHhc--CCCeEEECCCCCCCC-------------CCCCCCCHH
Confidence 55554332110 00 0 0011111 11122223333 54 589999964221 111222222
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 010547 396 FVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 429 (507)
Q Consensus 396 ~~l~~~~~~~~~~gls~~~al~~~T~n~A~~lgl 429 (507)
. ++.+.....+.|+|-+++-+.+-.|.-|.|..
T Consensus 321 ~-~p~L~~~L~~rG~se~~i~ki~g~N~lRvl~~ 353 (364)
T 3ly0_A 321 G-LPALQAAMRAHGYDEPLMRKLCHENWYGLLER 353 (364)
T ss_dssp G-HHHHHHHHHHHTCCHHHHHHHHTHHHHHHHHH
T ss_pred H-HHHHHHHHHHCCCCHHHHHHHHhHhHHHHHHH
Confidence 2 55566667788999999999999999998875
No 155
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=24.29 E-value=58 Score=28.95 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=26.4
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEe
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
++|.|+|...+ .....+....+.+.+.|+..+.-
T Consensus 21 ~~DlH~Ht~~S--Dg~~t~ee~v~~A~~~Gl~~i~i 54 (255)
T 2anu_A 21 LCDFHVHTNMS--DGHLPLGEVVDLFGKHGVDVVSI 54 (255)
T ss_dssp EEEEEECCTTT--TCSSCHHHHHHHHHHTTCSEEEE
T ss_pred EEEEeecCCCc--CCCCCHHHHHHHHHHCCCCEEEE
Confidence 69999999865 33455778888999999987653
No 156
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=24.09 E-value=25 Score=26.04 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHhhchhHHhCCCCCCccc-----cCCCCcEEEEcCCCceEe
Q 010547 409 GVTLEQLASWWSERPAKLAGQVSKGAIA-----IGNHADLVVWEPEAEFEL 454 (507)
Q Consensus 409 gls~~~al~~~T~n~A~~lgl~~~G~I~-----~G~~ADlvvld~~~~~~~ 454 (507)
+++++++.+.-..-.|++..+-+.|.+. +|.++++-|||-++...+
T Consensus 14 ~~~~~~~~~~~a~Eka~a~eLq~~G~~~~lWRv~G~y~nisIfdv~s~~eL 64 (96)
T 1mli_A 14 DMDPAKATQLKADEKELAQRLQREGTWRHLWRIAGHYANYSVFDVPSVEAL 64 (96)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeEEEEEecCCccEEEEEEcCCHHHH
Confidence 4677777777777777777663456553 999999999998876554
No 157
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=23.92 E-value=1.4e+02 Score=27.24 Aligned_cols=109 Identities=13% Similarity=0.192 Sum_probs=58.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHH----HHHHHHHhcCceeeEEEeccccC-CCcccHHHHHHHHHc
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (507)
+.+.+....+..+.+|+..++..++......-+.+.- +...+...++..+-.+ ... ...+..+..+...+.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG----vg~~~t~~ai~la~~a~~~ 95 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAG----TGANATAEAISLTQRFNDS 95 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE----CCCSSHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEe----cCCccHHHHHHHHHHHHhc
Confidence 3445667778888999999987752222222233322 2333333333332222 222 222344455555667
Q ss_pred CCcEEEEcccCCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 010547 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 231 (507)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~~~~v~~H~ 231 (507)
|+.++-... +.+...+.+.+.+.++ .|+..+.|+.+..
T Consensus 96 Gadavlv~~-----P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 96 GIVGCLTVT-----PYYNRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp SCSEEEEEC-----CCSSCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred CCCEEEECC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 888876532 2222346777776664 4555688988875
No 158
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=23.17 E-value=65 Score=29.29 Aligned_cols=36 Identities=11% Similarity=-0.094 Sum_probs=26.5
Q ss_pred eeecccccCCCCCCCCCChhHHHHHHHhCCceEEEe
Q 010547 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (507)
Q Consensus 100 fID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTt~~~ 135 (507)
++|.|+|...........+....+.+.+.|+..+.-
T Consensus 2 ~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~ 37 (283)
T 3dcp_A 2 KRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSI 37 (283)
T ss_dssp CEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
Confidence 589999996653323346788899999999886553
No 159
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=21.81 E-value=5.8e+02 Score=25.51 Aligned_cols=107 Identities=11% Similarity=0.089 Sum_probs=61.5
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccC--CCcccHHHHHHHHHcCCcEEEE
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVP--ENAYNASALEALLNAGVLGLKS 195 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~ 195 (507)
....+.++.+|+..+.-+. .. +..+.+....+.+.. ...+...+...... ..+...+..+++.+.|+..+..
T Consensus 120 ~~~ve~a~~aGvd~vrIf~-s~----sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L 194 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFD-AM----NDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIAL 194 (539)
T ss_dssp HHHHHHHHHTTCCEEEECC-TT----CCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEEE-eh----hHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 4456778899999888663 21 222445555555543 22333222111111 1122345566777889876654
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHh-c--CCcEEEecCCccc
Q 010547 196 FMCPSGINDFPMTNASHIKEGLSVLAR-Y--KRPLLVHAEMEKG 236 (507)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~-~--~~~v~~H~~~~~~ 236 (507)
- +.....++..+..+++..++ . +.++.+|+++...
T Consensus 195 ~------DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~G 232 (539)
T 1rqb_A 195 K------DMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTG 232 (539)
T ss_dssp E------ETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTS
T ss_pred C------CCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCC
Confidence 2 22345788888888877655 4 6899999887554
No 160
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=21.57 E-value=4.2e+02 Score=24.57 Aligned_cols=106 Identities=9% Similarity=-0.005 Sum_probs=55.0
Q ss_pred hHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHhc-CceeeEEEeccccCCCcccHHHHHHHHHcCCcEEEEcc
Q 010547 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFM 197 (507)
Q Consensus 119 ~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 197 (507)
....+.+...|+..+.-.. +. ...+......+.+.. ...+.+..........+...+..+.+...|+..+..-
T Consensus 96 ~~~i~~a~~aGvd~v~I~~----~~-s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~- 169 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVAT----HC-TEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA- 169 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEE----ET-TCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred HHHHHHHHhCCcCEEEEEE----ec-cHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC-
Confidence 3456666777888776542 11 111233333333332 2223333221111111223344455556788766552
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCCcc
Q 010547 198 CPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEK 235 (507)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~a~~~---~~~v~~H~~~~~ 235 (507)
+.....++..+.++++..++. +.++.+|+++..
T Consensus 170 -----DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~ 205 (345)
T 1nvm_A 170 -----DSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNL 205 (345)
T ss_dssp -----CTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTT
T ss_pred -----CCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCc
Confidence 222346788888888777664 689999997654
No 161
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=21.00 E-value=3.1e+02 Score=25.09 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=33.5
Q ss_pred HHHHHHHcCCcEEEE--cccCCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 010547 181 ALEALLNAGVLGLKS--FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (507)
Q Consensus 181 ~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 230 (507)
.+++..+.|+.+++. ++.+.+..+ ....+.+.++.+.|+++|+++.++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e--~~~l~~la~vv~ea~~~GlP~~~e 182 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGT--APTLEATAHAVNEAAAAQLPIMLE 182 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTH--HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhH--HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 577888889999884 333322111 234456788889999999999997
No 162
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=20.90 E-value=2.9e+02 Score=25.36 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=59.8
Q ss_pred CCCChhHHHHHHHhCCceEEEeCCCCCCCCCCCHHHHHHHHHHHh---cCceeeEEEecccc-CCCcccHHHHHHHHHcC
Q 010547 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIYVDVGFWGGLV-PENAYNASALEALLNAG 189 (507)
Q Consensus 114 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 189 (507)
+.+.+....+..+++|+..++..++......-+.+.-.+..+... ++.. +.. |.. ....+..+..+...+.|
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvp--Via--Gvg~~~t~~ai~la~~A~~~G 102 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQ--VIV--GVSAPGFAAMRRLARLSMDAG 102 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSE--EEE--ECCCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCc--EEE--ecCCCCHHHHHHHHHHHHHcC
Confidence 344567778888999999998875222222233333333332221 3322 222 222 23334556667777789
Q ss_pred CcEEEEcccCCCCCCCCCCCHHHHHHHH-HHHHhcC--CcEEEec
Q 010547 190 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYK--RPLLVHA 231 (507)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~~--~~v~~H~ 231 (507)
+.++-... + + . ..+.+.+.+-+ ..|+..+ +|+.+..
T Consensus 103 adavlv~~-P---~-~-~~s~~~l~~~f~~va~a~~~~lPiilYn 141 (313)
T 3dz1_A 103 AAGVMIAP-P---P-S-LRTDEQITTYFRQATEAIGDDVPWVLQD 141 (313)
T ss_dssp CSEEEECC-C---T-T-CCSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCEEEECC-C---C-C-CCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 98886632 2 1 1 24667666655 4555556 8988865
No 163
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=20.31 E-value=5.4e+02 Score=24.12 Aligned_cols=22 Identities=18% Similarity=-0.004 Sum_probs=17.6
Q ss_pred cCCCHHH-----HHHHHhhchhHHhCC
Q 010547 408 YGVTLEQ-----LASWWSERPAKLAGQ 429 (507)
Q Consensus 408 ~gls~~~-----al~~~T~n~A~~lgl 429 (507)
.+++.++ .-+....|+++++|+
T Consensus 344 ~~ls~~~~~~~~~~~I~~~NA~rlf~l 370 (376)
T 2qpx_A 344 LPFVDLAQKKAWINAICWQTSAKLYHQ 370 (376)
T ss_dssp CSSCCHHHHHHHHHHHHTHHHHHHTTC
T ss_pred cCcchhhcCHHHHHHHHHHhHHHHhCC
Confidence 4676666 778888999999998
No 164
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.02 E-value=2.9e+02 Score=25.11 Aligned_cols=51 Identities=8% Similarity=0.106 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCCHHHHHHHHHHHHhc----CCcEEEecCC
Q 010547 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY----KRPLLVHAEM 233 (507)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~----~~~v~~H~~~ 233 (507)
+.++.+.+.|+.++-. ++. ..+.+..+.++-.++++.+.+. +.+|.+++..
T Consensus 32 ~lv~~li~~Gv~gl~v-~Gt--tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~ 86 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVP-VGT--TGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS 86 (301)
T ss_dssp HHHHHHHHTTCCEEEC-SST--TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC
T ss_pred HHHHHHHHcCCCEEEE-Ccc--ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 4556667789888844 222 2445678888887777766654 5788888743
Done!