Query 010550
Match_columns 507
No_of_seqs 405 out of 2578
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 09:13:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010550.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010550hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1E-32 3.4E-37 271.0 27.2 212 259-506 14-240 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.2E-31 4.1E-36 264.8 17.3 211 259-506 15-242 (296)
3 2dmh_A Myoferlin; beta-sandwic 99.9 1E-20 3.5E-25 165.0 17.2 130 261-397 4-136 (140)
4 1wfj_A Putative elicitor-respo 99.9 6.6E-21 2.2E-25 165.4 14.2 128 258-397 4-133 (136)
5 1rlw_A Phospholipase A2, CALB 99.8 3.3E-20 1.1E-24 158.7 14.7 120 263-393 2-124 (126)
6 3b7y_A E3 ubiquitin-protein li 99.8 3.3E-20 1.1E-24 164.4 14.9 129 260-394 16-153 (153)
7 2fk9_A Protein kinase C, ETA t 99.8 1.2E-20 4E-25 166.8 11.9 119 259-393 24-156 (157)
8 1gmi_A Protein kinase C, epsil 99.8 3.8E-20 1.3E-24 160.6 13.3 117 262-394 4-133 (136)
9 2ep6_A MCTP2 protein; beta san 99.8 4.1E-20 1.4E-24 159.8 12.4 126 258-394 7-132 (133)
10 3kwu_A MUNC13-1; calcium bindi 99.8 3.3E-19 1.1E-23 157.0 17.9 123 260-393 13-146 (148)
11 3m7f_B E3 ubiquitin-protein li 99.8 1.6E-19 5.4E-24 163.9 16.0 130 260-395 4-142 (176)
12 3pyc_A E3 ubiquitin-protein li 99.8 1E-18 3.6E-23 150.7 15.4 125 262-392 3-131 (132)
13 2z0u_A WW domain-containing pr 99.8 3.4E-19 1.2E-23 157.8 9.2 111 259-369 38-154 (155)
14 2d8k_A Synaptotagmin VII; exoc 99.8 1.3E-18 4.5E-23 151.8 11.8 112 259-370 21-135 (141)
15 2nq3_A Itchy homolog E3 ubiqui 99.8 1.9E-18 6.5E-23 155.9 13.1 126 261-396 33-163 (173)
16 3f04_A Synaptotagmin-1; C2A, c 99.8 1.8E-18 6.1E-23 151.3 12.4 111 259-369 29-141 (143)
17 1rsy_A Synaptotagmin I; calciu 99.8 2.4E-18 8.3E-23 152.2 12.9 111 259-369 37-149 (152)
18 2b3r_A Phosphatidylinositol-4- 99.8 3.4E-18 1.1E-22 147.9 13.3 110 259-369 15-129 (134)
19 1ugk_A Synaptotagmin IV, KIAA1 99.7 9.9E-18 3.4E-22 145.7 13.5 112 259-370 17-133 (138)
20 2chd_A Rabphilin-3A, exophilin 99.7 8.5E-18 2.9E-22 146.8 11.4 111 259-369 24-139 (142)
21 2bwq_A Regulating synaptic mem 99.7 1.2E-17 4E-22 143.4 10.9 109 259-368 13-128 (129)
22 1wfm_A Synaptotagmin XIII; C2 99.7 1.6E-17 5.5E-22 144.4 11.6 109 259-370 21-132 (138)
23 3fdw_A Synaptotagmin-like prot 99.7 6.1E-18 2.1E-22 148.9 8.9 112 259-370 18-134 (148)
24 2enp_A B/K protein; C2 type 1, 99.7 7E-18 2.4E-22 148.3 8.8 112 259-370 21-141 (147)
25 1a25_A CALB, protein kinase C 99.7 2.7E-17 9.1E-22 144.9 12.4 107 263-370 30-139 (149)
26 3nsj_A Perforin-1; pore formin 99.7 2.1E-16 7.3E-21 165.9 20.9 177 195-393 304-503 (540)
27 1rh8_A Piccolo protein; beta-s 99.7 6.5E-18 2.2E-22 147.5 7.8 108 263-370 17-138 (142)
28 2dmg_A KIAA1228 protein; beta- 99.7 1.1E-17 3.9E-22 146.0 9.3 111 259-370 19-135 (142)
29 3rdl_A Protein kinase C alpha 99.7 2.1E-17 7.3E-22 143.2 10.7 108 262-370 14-124 (137)
30 2q3x_A Regulating synaptic mem 99.7 2.1E-17 7.2E-22 149.0 10.8 109 262-371 28-140 (171)
31 1v27_A Regulating synaptic mem 99.7 2.6E-17 8.8E-22 143.5 9.9 111 259-370 16-133 (141)
32 3fbk_A RGS3, RGP3, regulator o 99.7 5.5E-17 1.9E-21 143.5 12.1 110 259-370 22-137 (153)
33 1tjx_A Similar to synaptotagmi 99.7 1.3E-16 4.5E-21 142.0 12.9 111 259-369 20-146 (159)
34 3n5a_A Synaptotagmin-7; calciu 99.7 8.9E-17 3E-21 139.4 11.0 99 259-357 11-113 (138)
35 2cm5_A Rabphilin-3A; protein t 99.7 2.6E-16 8.8E-21 141.2 13.5 99 259-357 32-134 (166)
36 2cjt_A UNC-13 homolog A, MUNC1 99.7 3.3E-16 1.1E-20 134.6 13.6 89 261-359 2-91 (131)
37 1w15_A Synaptotagmin IV; metal 99.7 1.7E-16 5.7E-21 140.4 10.1 97 259-355 25-125 (153)
38 3l9b_A Otoferlin; C2-domain, b 99.7 7E-16 2.4E-20 130.8 12.7 120 263-396 20-142 (144)
39 3jzy_A Intersectin 2; C2 domai 99.6 8.1E-16 2.8E-20 162.9 13.1 122 260-394 383-508 (510)
40 1wfm_A Synaptotagmin XIII; C2 99.6 5.5E-15 1.9E-19 128.2 13.3 95 380-506 9-112 (138)
41 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.8E-15 1.3E-19 133.2 11.9 89 261-359 11-100 (167)
42 2enp_A B/K protein; C2 type 1, 99.6 2.3E-15 7.8E-20 132.1 9.2 95 380-506 9-121 (147)
43 1tjx_A Similar to synaptotagmi 99.6 5.5E-15 1.9E-19 131.5 11.6 95 380-506 8-115 (159)
44 3fbk_A RGS3, RGP3, regulator o 99.6 4.1E-15 1.4E-19 131.4 10.6 95 380-506 10-116 (153)
45 2cm5_A Rabphilin-3A; protein t 99.6 7E-15 2.4E-19 131.8 12.0 95 380-506 20-127 (166)
46 1w15_A Synaptotagmin IV; metal 99.6 9.1E-15 3.1E-19 129.2 12.2 95 380-506 13-120 (153)
47 1ugk_A Synaptotagmin IV, KIAA1 99.6 1E-14 3.4E-19 126.5 12.3 95 380-506 5-112 (138)
48 2z0u_A WW domain-containing pr 99.6 1.3E-15 4.6E-20 134.7 6.5 94 381-506 27-134 (155)
49 3fdw_A Synaptotagmin-like prot 99.6 6.7E-15 2.3E-19 129.3 11.0 95 380-506 6-114 (148)
50 3n5a_A Synaptotagmin-7; calciu 99.6 7E-15 2.4E-19 127.4 10.6 92 383-506 2-106 (138)
51 2bwq_A Regulating synaptic mem 99.6 7.4E-15 2.5E-19 125.7 10.5 93 382-506 3-111 (129)
52 1cjy_A CPLA2, protein (cytosol 99.6 5.6E-15 1.9E-19 159.8 10.8 108 261-369 15-125 (749)
53 1rsy_A Synaptotagmin I; calciu 99.6 6.9E-15 2.4E-19 129.8 9.4 95 380-506 25-130 (152)
54 3rdl_A Protein kinase C alpha 99.6 1.8E-14 6.2E-19 124.6 11.7 78 429-506 16-105 (137)
55 2d8k_A Synaptotagmin VII; exoc 99.6 2.1E-14 7.2E-19 125.0 12.0 95 380-506 9-115 (141)
56 1v27_A Regulating synaptic mem 99.6 1E-14 3.5E-19 126.9 9.4 95 380-506 4-114 (141)
57 2chd_A Rabphilin-3A, exophilin 99.6 7.4E-15 2.5E-19 128.0 8.5 95 380-506 12-120 (142)
58 2dmg_A KIAA1228 protein; beta- 99.5 1.1E-14 3.7E-19 127.0 9.3 94 380-506 7-115 (142)
59 3f04_A Synaptotagmin-1; C2A, c 99.5 1E-14 3.4E-19 127.3 9.1 94 381-506 18-122 (143)
60 1a25_A CALB, protein kinase C 99.5 2.6E-14 8.9E-19 125.6 11.1 78 429-506 31-120 (149)
61 2dmh_A Myoferlin; beta-sandwic 99.5 3.7E-14 1.3E-18 123.2 11.2 80 427-506 5-92 (140)
62 1rlw_A Phospholipase A2, CALB 99.5 3.2E-14 1.1E-18 121.2 10.3 78 428-506 2-91 (126)
63 2r83_A Synaptotagmin-1; C2A-C2 99.5 6.4E-14 2.2E-18 136.8 13.3 95 262-356 148-246 (284)
64 2ep6_A MCTP2 protein; beta san 99.5 3.6E-14 1.2E-18 122.1 10.0 79 426-506 10-95 (133)
65 2fk9_A Protein kinase C, ETA t 99.5 2.7E-14 9.1E-19 126.0 9.3 78 426-506 26-121 (157)
66 1djx_A PLC-D1, phosphoinositid 99.5 1E-13 3.5E-18 148.7 15.3 123 262-393 495-623 (624)
67 1wfj_A Putative elicitor-respo 99.5 7.3E-14 2.5E-18 120.7 9.3 79 426-506 7-93 (136)
68 2q3x_A Regulating synaptic mem 99.5 1.2E-13 4.1E-18 124.3 10.4 76 429-506 30-119 (171)
69 3kwu_A MUNC13-1; calcium bindi 99.5 2.4E-13 8.2E-18 119.3 11.3 80 425-506 13-110 (148)
70 2b3r_A Phosphatidylinositol-4- 99.5 1.1E-13 3.6E-18 119.4 8.5 79 428-506 19-110 (134)
71 1rh8_A Piccolo protein; beta-s 99.5 3.1E-14 1.1E-18 124.0 4.7 92 381-506 4-118 (142)
72 3pyc_A E3 ubiquitin-protein li 99.5 3.3E-13 1.1E-17 115.9 11.1 76 428-506 4-91 (132)
73 1gmi_A Protein kinase C, epsil 99.5 1.3E-13 4.4E-18 119.2 8.4 77 427-506 4-99 (136)
74 3b7y_A E3 ubiquitin-protein li 99.4 3.4E-13 1.2E-17 119.0 11.0 79 426-506 17-108 (153)
75 2nq3_A Itchy homolog E3 ubiqui 99.4 3.5E-13 1.2E-17 121.3 11.1 77 427-506 34-117 (173)
76 1dqv_A Synaptotagmin III; beta 99.4 3.1E-14 1.1E-18 139.9 4.3 97 261-357 149-249 (296)
77 3m7f_B E3 ubiquitin-protein li 99.4 4.4E-13 1.5E-17 121.2 10.7 78 427-506 6-96 (176)
78 2cjt_A UNC-13 homolog A, MUNC1 99.4 3.7E-13 1.3E-17 115.4 8.9 76 427-506 3-82 (131)
79 3bxj_A RAS GTPase-activating p 99.4 1.8E-14 6.3E-19 150.7 0.3 128 261-396 8-159 (483)
80 2cjs_A UNC-13 homolog A, MUNC1 99.4 8.1E-13 2.8E-17 118.0 8.3 75 428-506 13-91 (167)
81 3l9b_A Otoferlin; C2-domain, b 99.3 3.6E-12 1.2E-16 108.1 8.8 75 430-506 22-102 (144)
82 3nsj_A Perforin-1; pore formin 99.3 6.7E-12 2.3E-16 131.8 10.8 80 427-506 392-477 (540)
83 3pfq_A PKC-B, PKC-beta, protei 99.2 1.2E-11 4.2E-16 135.0 9.8 108 262-370 170-280 (674)
84 3jzy_A Intersectin 2; C2 domai 99.2 8.5E-11 2.9E-15 124.3 11.9 79 427-506 385-470 (510)
85 3ohm_B 1-phosphatidylinositol- 99.1 2E-10 6.9E-15 126.3 13.1 120 263-398 724-849 (885)
86 2zkm_X 1-phosphatidylinositol- 99.1 2.9E-10 1E-14 125.0 13.3 115 262-393 676-798 (799)
87 3qr0_A Phospholipase C-beta (P 99.1 4.4E-10 1.5E-14 122.9 14.0 119 263-397 649-774 (816)
88 1cjy_A CPLA2, protein (cytosol 99.0 2.8E-10 9.6E-15 123.2 8.9 79 427-506 16-106 (749)
89 1djx_A PLC-D1, phosphoinositid 99.0 8E-10 2.7E-14 118.6 10.8 79 427-506 495-588 (624)
90 1yrk_A NPKC-delta, protein kin 99.0 3.6E-09 1.2E-13 86.9 12.0 113 263-393 5-124 (126)
91 2enj_A NPKC-theta, protein kin 98.9 7.5E-09 2.6E-13 86.2 10.5 115 262-394 8-130 (138)
92 3qr0_A Phospholipase C-beta (P 98.9 4.9E-09 1.7E-13 114.7 10.8 78 427-506 648-735 (816)
93 3pfq_A PKC-B, PKC-beta, protei 98.9 6E-09 2E-13 113.7 11.4 78 429-506 172-261 (674)
94 3bxj_A RAS GTPase-activating p 98.8 4E-10 1.4E-14 117.7 -1.0 76 427-506 9-96 (483)
95 3ohm_B 1-phosphatidylinositol- 98.8 7.1E-09 2.4E-13 114.1 8.6 77 428-506 724-809 (885)
96 2zkm_X 1-phosphatidylinositol- 98.8 1.2E-08 4.2E-13 112.1 9.6 78 427-506 676-763 (799)
97 1yrk_A NPKC-delta, protein kin 97.9 7.5E-05 2.5E-09 61.4 10.6 77 427-506 4-88 (126)
98 2enj_A NPKC-theta, protein kin 97.9 6.7E-05 2.3E-09 62.5 9.4 77 427-506 8-93 (138)
99 3l4c_A Dedicator of cytokinesi 92.7 1.8 6.2E-05 39.2 12.8 57 299-355 77-139 (220)
100 2yrb_A Protein fantom; beta sa 90.8 3.1 0.00011 35.5 11.4 128 260-395 14-151 (156)
101 3hhm_A Phosphatidylinositol-4, 89.4 3.6 0.00012 46.2 13.6 93 263-357 354-456 (1091)
102 2wxf_A Phosphatidylinositol-4, 89.2 1.9 6.6E-05 47.9 11.4 92 263-357 216-325 (940)
103 1e7u_A Phosphatidylinositol 3- 83.4 4 0.00014 45.4 10.0 93 264-357 218-331 (961)
104 2wxf_A Phosphatidylinositol-4, 82.9 2.5 8.7E-05 46.9 8.1 70 428-497 216-293 (940)
105 2y3a_A Phosphatidylinositol-4, 72.7 4.4 0.00015 45.7 6.2 73 263-338 352-430 (1092)
106 2y3a_A Phosphatidylinositol-4, 71.2 3.7 0.00013 46.3 5.1 70 428-497 352-429 (1092)
107 2l2t_A Receptor tyrosine-prote 61.7 2.6 9E-05 27.6 0.9 15 23-37 25-39 (44)
108 1e7u_A Phosphatidylinositol 3- 60.0 18 0.0006 40.3 7.7 70 428-497 217-295 (961)
109 3l4c_A Dedicator of cytokinesi 51.0 18 0.0006 32.7 4.8 39 459-497 78-117 (220)
110 3hhm_A Phosphatidylinositol-4, 47.5 27 0.00092 39.3 6.6 69 428-497 354-432 (1091)
111 2ks1_B Epidermal growth factor 46.1 4.9 0.00017 26.3 0.3 14 23-36 26-39 (44)
112 2jwa_A Receptor tyrosine-prote 44.9 3.5 0.00012 27.0 -0.6 23 14-36 17-39 (44)
113 2yrb_A Protein fantom; beta sa 23.1 1.5E+02 0.0053 24.9 5.9 79 426-506 15-110 (156)
114 1iij_A ERBB-2 receptor protein 21.8 12 0.00042 23.0 -0.9 22 14-35 13-34 (35)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1e-32 Score=270.98 Aligned_cols=212 Identities=30% Similarity=0.459 Sum_probs=179.3
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V~d 336 (507)
.....|.|+|+|++|++|+.+|..|.+||||++++++.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 4456799999999999999999899999999999986544467899999999999999999998643 35799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEEeccCCcccccccccccccCCCCC
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGN 416 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~ 416 (507)
++.+++|++||++.++|.++..+.....|++|.... .......|+|++.+.|.|
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~----~~~~~~~G~i~l~l~~~p---------------------- 147 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAE----KEEQEKLGDICFSLRYVP---------------------- 147 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCS----SCCCCCCCEEEEEEEEET----------------------
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeeccc----cccccccccEEEEEEecC----------------------
Confidence 999999999999999999999888888888885421 112346799999998875
Q ss_pred CCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc--C---eEEEeeeecCCCCCcccceEEEEecCCCCC-
Q 010550 417 DQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK--G---DKKRTKMIRKTRDPAWNEEFQFMLDEPPLH- 487 (507)
Q Consensus 417 ~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~--~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~- 487 (507)
..+.|.|+|++|+||+.. +.+||||++++. + .+++|+++++|+||+|||.|.|.+......
T Consensus 148 ----------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 217 (284)
T 2r83_A 148 ----------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQK 217 (284)
T ss_dssp ----------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGG
T ss_pred ----------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCc
Confidence 245799999999999863 579999999985 2 356999999999999999999999766443
Q ss_pred ceEEEEEEEC----CCCeeeeEe
Q 010550 488 EKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 488 ~~L~v~V~d~----~~~~iG~~~ 506 (507)
..|.|+|||+ ++++||++.
T Consensus 218 ~~l~i~V~d~d~~~~~~~iG~~~ 240 (284)
T 2r83_A 218 VQVVVTVLDYDKIGKNDAIGKVF 240 (284)
T ss_dssp EEEEEEEEECCSSSCCCEEEEEE
T ss_pred eEEEEEEEeCCCCCCCcEEEEEE
Confidence 3899999998 689999985
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=1.2e-31 Score=264.77 Aligned_cols=211 Identities=29% Similarity=0.473 Sum_probs=170.8
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V~d 336 (507)
.....|.|.|+|++|++|+.+|..|.+||||++++.+.....++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 4456799999999999999999999999999999964433457999999999999999999998643 24589999999
Q ss_pred cCCCCCCCeeEEEEEE-CcccCC-CCceEEEEeccccccCCCCCCCccceEEEEEEEEEeccCCcccccccccccccCCC
Q 010550 337 WDKVGGHDRLGMQLVP-LKLLTP-HETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGS 414 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~-l~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~ 414 (507)
+|.+++|++||++.++ +.++.. ......|+++... .......|+|++.+.|.|
T Consensus 95 ~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~-----~~~~~~~G~i~vsl~y~~-------------------- 149 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG-----GSEKADLGELNFSLCYLP-------------------- 149 (296)
T ss_dssp CCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC-----SSCCSCCCEEEEEEEEET--------------------
T ss_pred cCCCCCCceEEEEEeccccccccCCccceeeeccccc-----cccccccceEEEEEEecc--------------------
Confidence 9999999999999996 444443 2334456665332 112346799999999875
Q ss_pred CCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc--C---eEEEeeeecCCCCCcccceEEEEecCCCC
Q 010550 415 GNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK--G---DKKRTKMIRKTRDPAWNEEFQFMLDEPPL 486 (507)
Q Consensus 415 ~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~--~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~ 486 (507)
..|.|.|+|.+|+||+.. +.+||||++++. + .++||++++++.||+|||.|.|.+.....
T Consensus 150 ------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 217 (296)
T 1dqv_A 150 ------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESV 217 (296)
T ss_dssp ------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGG
T ss_pred ------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHc
Confidence 246799999999999863 568999999996 3 46799999999999999999999876543
Q ss_pred C-ceEEEEEEEC----CCCeeeeEe
Q 010550 487 H-EKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 487 ~-~~L~v~V~d~----~~~~iG~~~ 506 (507)
. ..|.|+|||+ ++++||+++
T Consensus 218 ~~~~L~i~V~d~d~~~~~~~iG~~~ 242 (296)
T 1dqv_A 218 ENVGLSIAVVDYDCIGHNEVIGVCR 242 (296)
T ss_dssp GSCCCCCEEEECCSSSCCEEEEECC
T ss_pred cCcEEEEEEEeCCCCCCCceEEEEE
Confidence 3 3799999998 678999875
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1e-20 Score=165.04 Aligned_cols=130 Identities=31% Similarity=0.442 Sum_probs=110.0
Q ss_pred CceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC---CCCeEEEEEEEc
Q 010550 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP---ESQILQLQVFDW 337 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~---~~~~L~v~V~d~ 337 (507)
...|.|+|+|++|++|+..+. |.+||||++++++++ ++|++++++.||+|||+|.|.+..+ ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 456899999999999999998 999999999999754 6999999999999999999999754 368999999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEEeccC
Q 010550 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKE 397 (507)
Q Consensus 338 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~~ 397 (507)
+..++|++||++.+++.++..+.....|+++....+. ......|+|+++++|.|...
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCCBS
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECCCC
Confidence 9999999999999999999888777778773322222 12356799999999998543
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.85 E-value=6.6e-21 Score=165.41 Aligned_cols=128 Identities=31% Similarity=0.505 Sum_probs=110.8
Q ss_pred cccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecC-CCCCCeEeeEEEEEeecCCCCeEEEEEEE
Q 010550 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFD 336 (507)
Q Consensus 258 ~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~V~d 336 (507)
....+.|.|+|+|++|++|+..|..|.+||||+++++++. .+|++++ ++.||.|||+|.|.+.+ ....|.|+|||
T Consensus 4 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d 79 (136)
T 1wfj_A 4 GSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFD 79 (136)
T ss_dssp CCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECC
T ss_pred CCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEE
Confidence 3456889999999999999999988999999999998764 5899998 89999999999999987 56799999999
Q ss_pred cCCCCCCCeeEEEEEECcccC-CCCceEEEEeccccccCCCCCCCccceEEEEEEEEEeccC
Q 010550 337 WDKVGGHDRLGMQLVPLKLLT-PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKE 397 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~~ 397 (507)
++.+++|++||++.++|.++. .+.....|++|.. ..+..|+|+++++|.|...
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--------~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--------DEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE--------TTEEEEEEEEEEEEEECCS
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec--------CCccCEEEEEEEEEEeCCC
Confidence 999999999999999999994 4444566777752 2568899999999999654
No 5
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=3.3e-20 Score=158.72 Aligned_cols=120 Identities=26% Similarity=0.407 Sum_probs=103.6
Q ss_pred eEEEEEEEEEeccccc---cCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 010550 263 VGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~ 339 (507)
.|.|+|+|++|++|+. .|..|.+||||++++++.....++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 4899999999999998 4667899999999998754455799999999999999999999976677899999999998
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEE
Q 010550 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (507)
Q Consensus 340 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~ 393 (507)
. +|++||++.++|.++..+.....|++|. ....|.|+++++..
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~----------~~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFN----------QVTEMVLEMSLEVA 124 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEET----------TTEEEEEEEEEECC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcC----------CCceEEEEEEEEeC
Confidence 7 4899999999999999888888899873 24568888877544
No 6
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=3.3e-20 Score=164.41 Aligned_cols=129 Identities=33% Similarity=0.519 Sum_probs=101.6
Q ss_pred cCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCcc---CCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEE
Q 010550 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK---LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (507)
Q Consensus 260 ~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~---~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d 336 (507)
....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.. ....|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEE
Confidence 45679999999999999999988999999999998432 235799999999999999999999976 45789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce------EEEEeccccccCCCCCCCccceEEEEEEEEEe
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETK------EFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~------~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p 394 (507)
++..++|++||++.++|.++..+... ..|++|.... ...+..|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999999999999999999866532 4677764321 12457899999999986
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=166.78 Aligned_cols=119 Identities=27% Similarity=0.330 Sum_probs=102.4
Q ss_pred ccCceEEEEEEEEEeccccccCc----------CCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCC
Q 010550 259 IKKPVGILHVKVVRASKLLKKDF----------LGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQ 328 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~----------~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~ 328 (507)
.....|.|+|+|++|++|+++|. .|.+||||++++++++. .+|+++++|+||+|||+|.|.+.+ .+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~--~kT~v~~ktlnP~WNE~F~f~v~~--~~ 99 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRV--GQTSTKQKTNKPTYNEEFCANVTD--GG 99 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEE--EECCCCSSCSSCEEEEEEEEEEEE--EC
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEee--EEeeecCCCCCCccCcEEEEEcCC--CC
Confidence 34568999999999999998873 26799999999987543 589999999999999999999975 46
Q ss_pred eEEEEEEEcCCCCCCCeeEEEEEECcccCCC----CceEEEEeccccccCCCCCCCccceEEEEEEEEE
Q 010550 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPH----ETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (507)
Q Consensus 329 ~L~v~V~d~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~ 393 (507)
.|.|+|||+|.+++|++||++.|++.++..+ .....|++|. +.|+|+++++|.
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEEEE
Confidence 8999999999999999999999999998754 5678888872 379999999874
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=3.8e-20 Score=160.63 Aligned_cols=117 Identities=24% Similarity=0.353 Sum_probs=100.6
Q ss_pred ceEEEEEEEEEeccccccCcCCC-----------CCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeE
Q 010550 262 PVGILHVKVVRASKLLKKDFLGT-----------SDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQIL 330 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~~g~-----------~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L 330 (507)
..|.|+|+|++|++|+++|..+. +||||++++++.. ..+|+++++|.||+|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999998886544 9999999997654 25899999999999999999999764 789
Q ss_pred EEEEEEcCCCCCCCeeEEEEEECcccCCCC--ceEEEEeccccccCCCCCCCccceEEEEEEEEEe
Q 010550 331 QLQVFDWDKVGGHDRLGMQLVPLKLLTPHE--TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (507)
Q Consensus 331 ~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p 394 (507)
.|+|||+|.+++|++||++.+++.++..+. ....|+++ .+.|+|+++++|.+
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L------------~~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL------------EPEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC------------BSSCEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc------------CCCeEEEEEEEEEe
Confidence 999999999999999999999999998753 33677765 24799999999986
No 9
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=4.1e-20 Score=159.77 Aligned_cols=126 Identities=35% Similarity=0.516 Sum_probs=107.1
Q ss_pred cccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEc
Q 010550 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (507)
Q Consensus 258 ~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~ 337 (507)
....+.|.|+|+|++|++|+..|..|.+||||+++++++. .+|++++++.||.|||+|.|.+.+. .+.|.|+|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4556789999999999999999989999999999998764 5899999999999999999999764 57899999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEEe
Q 010550 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (507)
Q Consensus 338 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p 394 (507)
+..++|++||++.+++.++..+.. .|++|... .......|+|+++++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~~--~w~~L~~~-----~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQP--NCYVLKNK-----DLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSCC--EECCCBCS-----CTTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCCc--eEEEeecC-----CCCCccceEEEEEEEEEe
Confidence 998899999999999999977554 56665432 112357899999999864
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=3.3e-19 Score=156.96 Aligned_cols=123 Identities=30% Similarity=0.436 Sum_probs=103.3
Q ss_pred cCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 010550 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (507)
Q Consensus 260 ~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~ 339 (507)
....|.|+|+|++|++|+.+|..|.+||||+++++++. ++|++++++.||.|||+|.|.+..+ .+.|.++|||++.
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~ 88 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDD 88 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCC
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCC
Confidence 34569999999999999999999999999999997654 5999999999999999999999765 4789999999998
Q ss_pred C-----------CCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEE
Q 010550 340 V-----------GGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (507)
Q Consensus 340 ~-----------~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~ 393 (507)
. ++|++||++.+++.++. .....|++|.... ......|+|+++++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRT-----DKSAVSGAIRLHISVE 146 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSS-----TTCCCCCEEEEEEEEE
T ss_pred CccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCC-----CCCCCceEEEEEEEEE
Confidence 5 78999999999999994 3456777775321 1244679999999985
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.6e-19 Score=163.93 Aligned_cols=130 Identities=32% Similarity=0.498 Sum_probs=100.3
Q ss_pred cCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccC---CceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEE
Q 010550 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL---PWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (507)
Q Consensus 260 ~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~---~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d 336 (507)
....|.|+|+|++|++|+.++..|.+||||++++.+... ..++|++++++.||.|||+|.|.+.. ....|.|+|||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d 82 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFD 82 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEE
Confidence 346799999999999999999899999999999985321 34699999999999999999999975 45789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce-E-----EEEeccccccCCCCCCCccceEEEEEEEEEec
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETK-E-----FTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~ 395 (507)
++.+++|++||++.++|.++...... . .|++|.... ...+..|+|+++++|.|.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-----TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC-----CCCccCEEEEEEEEEEeC
Confidence 99999999999999999999876433 1 577764321 124578999999999997
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.80 E-value=1e-18 Score=150.67 Aligned_cols=125 Identities=29% Similarity=0.438 Sum_probs=100.0
Q ss_pred ceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCCCC
Q 010550 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKVG 341 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~~~ 341 (507)
....|+|+|++|++|+.+|..|.+||||++++++.. ..++|+++++|+||.|||+|.|.+.+. +.|.|+|||++..+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 347899999999999999999999999999997642 457999999999999999999999764 35999999999887
Q ss_pred C---CCeeEEEEEECcccC-CCCceEEEEeccccccCCCCCCCccceEEEEEEEE
Q 010550 342 G---HDRLGMQLVPLKLLT-PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTY 392 (507)
Q Consensus 342 ~---d~~lG~~~i~l~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~ 392 (507)
+ |++||++.+++.++. .......+++|... .+. ...+..|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~-~~~--~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL-NPS--DTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS-STT--CCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec-CCC--CCCceeEEEEEEEEc
Confidence 6 899999999999883 22333456666442 111 123568999999875
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=3.4e-19 Score=157.85 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=95.0
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcC---ccCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG---EKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~---~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~ 333 (507)
.....+.|+|+|++|++|+.+|..|.+||||++++.+ ....++||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 3456789999999999999999999999999999976 332357999999999999999999998642 25689999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCC-CCceEEEEecc
Q 010550 334 VFDWDKVGGHDRLGMQLVPLKLLTP-HETKEFTLDLL 369 (507)
Q Consensus 334 V~d~~~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~l~ 369 (507)
|||+|.++++++||++.++|.++.. +.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999999999999999963 55667787763
No 14
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=151.79 Aligned_cols=112 Identities=38% Similarity=0.548 Sum_probs=97.5
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeec---CCCCeEEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQVF 335 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~V~ 335 (507)
.....+.|+|+|++|++|+.+|..|.+||||++++.+.....++|++++++.||+|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 344678999999999999999989999999999997544446799999999999999999998532 23578999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 336 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
|++.+++|++||++.+++.++..+.....|++|..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999999999999999999998888888998854
No 15
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.9e-18 Score=155.90 Aligned_cols=126 Identities=18% Similarity=0.262 Sum_probs=102.3
Q ss_pred CceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCCC
Q 010550 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~~ 340 (507)
...+.|+|+|++|++|+..+..+.+||||+++++++ .++|+++++|+||+|||+|.|.+. ..+.|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~---~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQ---SKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTE---EEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCE---EeEccccCCCCCCeECCEEEEEeC--CCCEEEEEEEECCCC
Confidence 456899999999999994444455999999999873 469999999999999999999985 378999999999999
Q ss_pred CCCCeeEEEEEECcccCCCC-----ceEEEEeccccccCCCCCCCccceEEEEEEEEEecc
Q 010550 341 GGHDRLGMQLVPLKLLTPHE-----TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (507)
Q Consensus 341 ~~d~~lG~~~i~l~~l~~~~-----~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~ 396 (507)
++|++||++.+++.++..+. ....|++|... ....+..|+|++++.|.+..
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-----~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-----KEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-----SCTTSEEEEEEEEEESEECC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-----CCCCcccEEEEEEEeeeecc
Confidence 99999999999999986432 12567776543 11346789999999999864
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=1.8e-18 Score=151.32 Aligned_cols=111 Identities=33% Similarity=0.434 Sum_probs=98.1
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V~d 336 (507)
.....+.|+|+|++|++|+..|..+.+||||++++.+.....++|++++++.||.|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 3456799999999999999999889999999999965444567999999999999999999998632 45789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 369 (507)
++.+++|++||++.++|.++..+.....|++|.
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999999999999999999999888888898874
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=2.4e-18 Score=152.17 Aligned_cols=111 Identities=33% Similarity=0.434 Sum_probs=97.6
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V~d 336 (507)
.....+.|+|+|++|++|+..|..+.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 3456789999999999999999889999999999975444457999999999999999999988632 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 369 (507)
++.+++|++||++.+++.++..+.....|++|.
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 999999999999999999998888888898874
No 18
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=3.4e-18 Score=147.86 Aligned_cols=110 Identities=25% Similarity=0.286 Sum_probs=94.8
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEE-eec--CCCCeEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKE--PESQILQLQ 333 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~-v~~--~~~~~L~v~ 333 (507)
.....|.|.|+|++|++|+. +..|.+||||++++.+. ...+++|+++++|+||+|||+|.|. +.. .....|.|+
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp EEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 34456899999999999997 77889999999999543 3345799999999999999999999 753 245799999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 010550 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (507)
Q Consensus 334 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 369 (507)
|||++.+++|++||++.++|.++..+.....|++|.
T Consensus 94 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 94 VLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred EEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 999999999999999999999999888888899874
No 19
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=9.9e-18 Score=145.67 Aligned_cols=112 Identities=25% Similarity=0.377 Sum_probs=93.9
Q ss_pred ccCceEEEEEEEEEeccccccCcC-CCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEE-eecC--CCCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFL-GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~-g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~V 334 (507)
.....+.|.|+|++|++|+.+|.. |.+||||++++.+.....++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 344678999999999999999985 899999999998644456899999999999999999996 5432 346899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCc-eEEEEeccc
Q 010550 335 FDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLK 370 (507)
Q Consensus 335 ~d~~~~~~d~~lG~~~i~l~~l~~~~~-~~~~~~l~~ 370 (507)
||++.+++|++||++.++|.++..+.. ...|+++.+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 999999999999999999999987643 456677643
No 20
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=8.5e-18 Score=146.80 Aligned_cols=111 Identities=31% Similarity=0.442 Sum_probs=96.0
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEE-eecC--CCCeEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQ 333 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~ 333 (507)
.....+.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||+|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 34467899999999999999998899999999999752 2345799999999999999999998 5321 13689999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 010550 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (507)
Q Consensus 334 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 369 (507)
|||++.+++|++||++.+++.++..++...+|++|.
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 999999999999999999999999988888888874
No 21
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.2e-17 Score=143.36 Aligned_cols=109 Identities=23% Similarity=0.343 Sum_probs=87.5
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeec---CCCCeEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQ 333 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~ 333 (507)
.....|.|.|+|++|++|+.++..|.+||||++++.+. ....++|+++++|.||+|||+|.|.+.. .....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 34456899999999999999998999999999999542 2345799999999999999999999532 235799999
Q ss_pred EEEcCCCCC--CCeeEEEEEECcccCCCCceEEEEec
Q 010550 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDL 368 (507)
Q Consensus 334 V~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~l 368 (507)
|||++..++ |++||++.+++.++.... ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999987654 6677765
No 22
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.6e-17 Score=144.36 Aligned_cols=109 Identities=21% Similarity=0.195 Sum_probs=91.9
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc-cCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE-KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVF 335 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~-~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V~ 335 (507)
.....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 44567899999999993 677899999999999542 22347899999999999999999998643 2568999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 336 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
|+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999986667778888754
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=6.1e-18 Score=148.88 Aligned_cols=112 Identities=24% Similarity=0.351 Sum_probs=96.4
Q ss_pred ccCceEEEEEEEEEeccccccC-cCCCCCcEEEEEEcCcc--CCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d-~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~ 333 (507)
.....|.|.|+|++|++|+..+ ..|.+||||++++.+.. ..+++|+++++|.||+|||+|.|.+... ....|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4456799999999999999888 57899999999997543 2357999999999999999999998653 24579999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 334 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
|||++.+++|++||++.++|.++..+.....|++|..
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 9999999999999999999999987767778888854
No 24
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=7e-18 Score=148.30 Aligned_cols=112 Identities=27% Similarity=0.360 Sum_probs=93.5
Q ss_pred ccCceEEEEEEEEEecccccc-Cc------CCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC--CCCe
Q 010550 259 IKKPVGILHVKVVRASKLLKK-DF------LGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQI 329 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~-d~------~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~ 329 (507)
.....|.|.|+|++|++|+.. +. .|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 445678999999999999984 43 35899999999986444467999999999999999999998632 2468
Q ss_pred EEEEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 330 LQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 330 L~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
|.|+|||++.+++|++||++.++|.++........|+.|..
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999999999999999999999987766667777643
No 25
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.7e-17 Score=144.90 Aligned_cols=107 Identities=35% Similarity=0.501 Sum_probs=93.0
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEEcCcc--CCceeeeecCCCCCCeEeeEEEEEeecCC-CCeEEEEEEEcCC
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWDK 339 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~V~d~~~ 339 (507)
.+.|+|+|++|++|+..|..+.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 57899999999999999988999999999997532 34579999999999999999999987532 4689999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 340 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
.++|++||++.+++.++..+ ....|++|..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 99999999999999999876 4677888753
No 26
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.72 E-value=2.1e-16 Score=165.94 Aligned_cols=177 Identities=23% Similarity=0.315 Sum_probs=135.3
Q ss_pred eeEEEEEcCCCce-EEEEEEEcCccccc-CcchHHHHHHHHHHHhhhcccC-----Ccccee-cccc-------------
Q 010550 195 FATMVVSLMERPH-VDFGIKILGGDIMS-IPGLYQFIQKCITKYVAGIYIW-----PQTYEI-PILD------------- 253 (507)
Q Consensus 195 ~~~~~~sf~~~P~-id~~~~~~g~~i~~-ip~l~~~~~~~i~~~l~~~~v~-----P~~~~~-~l~~------------- 253 (507)
+..|.=|+...|. |++.+.|+ .++.. -+-....++.++.+++.+.-.+ |..-.. ++..
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI-~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~t 382 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPL-HTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKVT 382 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEG-GGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTTB
T ss_pred HHHHHHHHhhCCceEEEEEEEH-HHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCCc
Confidence 5666667777885 49999998 55543 4566788999999999887666 421111 1211
Q ss_pred -cccccccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeec-CCCCeEE
Q 010550 254 -ASSVAIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE-PESQILQ 331 (507)
Q Consensus 254 -~~~~~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~-~~~~~L~ 331 (507)
...+......|.|+|+|++|++|+. |..|++||||+++++++. .+|+++++++||+|||+|.|.+.+ ...+.|+
T Consensus 383 ~~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~ 458 (540)
T 3nsj_A 383 NQDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLR 458 (540)
T ss_dssp CGGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCEE
T ss_pred ccccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEEE
Confidence 1112345568999999999999998 989999999999998754 699999999999999999998653 3578899
Q ss_pred EEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEE
Q 010550 332 LQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (507)
Q Consensus 332 v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~ 393 (507)
|+|||+|..++||+||++.++|.. ..++.|+.+ ..|.|+++++..
T Consensus 459 ~~V~D~D~~~~dD~LG~~~~~L~~----g~~~~~~~l-------------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 459 VQVWDADYGWDDDLLGSCDRSPHS----GFHEVTCEL-------------NHGRVKFSYHAK 503 (540)
T ss_dssp EEEEECCSSSCCEEEEEEEECCCS----EEEEEEEEC-------------SSSEEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEEEeeC----CcEEEEEEc-------------CCeEEEEEEEEE
Confidence 999999999999999999999882 234556653 258888887643
No 27
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=6.5e-18 Score=147.52 Aligned_cols=108 Identities=28% Similarity=0.443 Sum_probs=93.1
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccC-----------CceeeeecCCCCCCeEeeEEEEE-ee--cCCCC
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL-----------PWKKTTVKKKNLNPEWNENFKLV-VK--EPESQ 328 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~-----------~~~~T~v~~~t~nP~Wne~f~f~-v~--~~~~~ 328 (507)
.|.|+|+|++|++|+.+|..|.+||||++++.+... ..++|+++++|+||+|||+|.|. +. +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999999999999999987531 24689999999999999999997 53 22467
Q ss_pred eEEEEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 329 ~L~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
.|.|+|||++.+++|++||++.++|.++..+.....|++|..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 899999999999999999999999999987666778888743
No 28
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=1.1e-17 Score=145.98 Aligned_cols=111 Identities=29% Similarity=0.306 Sum_probs=92.5
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCcc--CCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V 334 (507)
.....+.|.|+|++|++|+.+|..| +||||++++.+.. ...++|+++++|.||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 3445689999999999999999888 9999999996432 2567999999999999999999998532 245899999
Q ss_pred EEcCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 335 FDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 335 ~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
||++.+++ |++||++.++|.++..+.....|++|..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99998763 5799999999999987766677777754
No 29
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=2.1e-17 Score=143.24 Aligned_cols=108 Identities=32% Similarity=0.494 Sum_probs=93.1
Q ss_pred ceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeecCC-CCeEEEEEEEcC
Q 010550 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~V~d~~ 338 (507)
..|.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 45899999999999999999999999999999543 234579999999999999999999986532 458999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 339 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
..++|++||++.++|.++..+. ...|++|..
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9999999999999999997654 778888754
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=2.1e-17 Score=149.04 Aligned_cols=109 Identities=26% Similarity=0.354 Sum_probs=94.4
Q ss_pred ceEEEEEEEEEeccccccCc-CCCCCcEEEEEEcCcc--CCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEE-Ec
Q 010550 262 PVGILHVKVVRASKLLKKDF-LGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVF-DW 337 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~-~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~-d~ 337 (507)
..|.|.|+|++|++|+.+|. .|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 46899999999999999985 6899999999997532 235789999999999999999999854 5689999999 99
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccc
Q 010550 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKH 371 (507)
Q Consensus 338 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~ 371 (507)
|.+++|++||++.++|.++..+.....|++|...
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999999999999987788889998643
No 31
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=2.6e-17 Score=143.46 Aligned_cols=111 Identities=23% Similarity=0.332 Sum_probs=93.2
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeec---CCCCeEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQ 333 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~ 333 (507)
.....+.|+|+|++|++|+.++..|.+||||++++.+. ....++|++++++.||+|||+|.|.+.. .....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 34456899999999999999998999999999998542 2345799999999999999999998532 235799999
Q ss_pred EEEcCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 334 V~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
|||++..++ |++||++.++|.++..+. ...|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999887 999999999999987654 778888754
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=5.5e-17 Score=143.53 Aligned_cols=110 Identities=25% Similarity=0.354 Sum_probs=93.4
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEee--cCCCCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVK--EPESQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~--~~~~~~L~v~V 334 (507)
.....|.|.|+|++|++|+..| .|.+||||++++.+. ....++|+++++|.||+|||+|.|.+. +. ...|.|+|
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~L~i~V 99 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDD-QKRLLVTV 99 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGT-TSEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHh-CCEEEEEE
Confidence 4556799999999999999998 699999999999543 234579999999999999999999984 33 35699999
Q ss_pred EEcCCCCC-CCeeEEEEEECcccCC-CCceEEEEeccc
Q 010550 335 FDWDKVGG-HDRLGMQLVPLKLLTP-HETKEFTLDLLK 370 (507)
Q Consensus 335 ~d~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~l~~ 370 (507)
||++.+++ |++||++.++|.++.. +.....|++|..
T Consensus 100 ~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 100 WNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred EeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 99998876 8999999999999984 677788988854
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=1.3e-16 Score=142.02 Aligned_cols=111 Identities=35% Similarity=0.485 Sum_probs=91.8
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V 334 (507)
.....|.|.|+|++|++|+..|..|.+||||++++.+. ....++|+++++++||.|||+|.|.+... ....|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 34567899999999999999998899999999999743 22357999999999999999999998643 246899999
Q ss_pred EEcCCCCCCCeeEEEEEECccc------------CCCCceEEEEecc
Q 010550 335 FDWDKVGGHDRLGMQLVPLKLL------------TPHETKEFTLDLL 369 (507)
Q Consensus 335 ~d~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~l~ 369 (507)
||++.+++|++||++.+++..+ .++.....|++|.
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred EECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECc
Confidence 9999999999999999999864 2334556677664
No 34
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=8.9e-17 Score=139.45 Aligned_cols=99 Identities=32% Similarity=0.460 Sum_probs=85.6
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeecCC--CCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~V 334 (507)
.....|.|.|+|++|++|+..|..|.+||||++++.+. ...+++|++++++.||.|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 34456899999999999999998899999999999753 223578999999999999999999986433 36899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccC
Q 010550 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (507)
Q Consensus 335 ~d~~~~~~d~~lG~~~i~l~~l~ 357 (507)
||++.+++|++||++.+++.++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999999754
No 35
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=2.6e-16 Score=141.21 Aligned_cols=99 Identities=34% Similarity=0.456 Sum_probs=86.4
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V 334 (507)
.....+.|.|+|++|++|+.+|..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 44567899999999999999998999999999999863 23457999999999999999999998643 256899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccC
Q 010550 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (507)
Q Consensus 335 ~d~~~~~~d~~lG~~~i~l~~l~ 357 (507)
||++.+++|++||++.+++.++.
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCH
T ss_pred EECCCCCCCcEEEeEEEecccCC
Confidence 99999999999999999999863
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.68 E-value=3.3e-16 Score=134.57 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=74.1
Q ss_pred CceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecC-CCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 010550 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~ 339 (507)
.+.|.|+|+|++|+++.. .|.+||||+++ . +. .+|+++. ++.||.|||+|.|.+.+. ...|.|+|||+|
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 71 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 71 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-
Confidence 356999999999998853 57899999999 2 22 3455544 799999999999999764 457999999999
Q ss_pred CCCCCeeEEEEEECcccCCC
Q 010550 340 VGGHDRLGMQLVPLKLLTPH 359 (507)
Q Consensus 340 ~~~d~~lG~~~i~l~~l~~~ 359 (507)
.++|++||++.++|.++...
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBC
T ss_pred CCCCCeEEEEEEEHHHhhhc
Confidence 88999999999999998644
No 37
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=1.7e-16 Score=140.44 Aligned_cols=97 Identities=29% Similarity=0.374 Sum_probs=79.0
Q ss_pred ccCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeecCC--CCeEEEEE
Q 010550 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (507)
Q Consensus 259 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~V 334 (507)
.....+.|.|+|++|++|+..|..|.+||||++++.+. ...+++|+++++++||+|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 34456899999999999999998899999999999542 223569999999999999999999987542 46899999
Q ss_pred EEcCCCCCCCeeEEEEEECcc
Q 010550 335 FDWDKVGGHDRLGMQLVPLKL 355 (507)
Q Consensus 335 ~d~~~~~~d~~lG~~~i~l~~ 355 (507)
||++.+++|++||++.+++.+
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.66 E-value=7e-16 Score=130.83 Aligned_cols=120 Identities=19% Similarity=0.303 Sum_probs=100.8
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecC-CCCCCeEeeEEEEEeecCC--CCeEEEEEEEcCC
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPE--SQILQLQVFDWDK 339 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~--~~~L~v~V~d~~~ 339 (507)
.-.|+|+|.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||+|||.|.+.+..+. +..|.+.|||+++
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 347999999999998 578999999997654 6999998 6999999999999987543 6789999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEEecc
Q 010550 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (507)
Q Consensus 340 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~ 396 (507)
++++++||++.++|+++...+....+..|... .+....++|.++++|.|..
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~------n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDD------NNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECT------TSCEEEEEEEEEEEEEETT
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCC------CCCccccEEEEEEEecCCC
Confidence 99999999999999999987766666655432 2244568999999999953
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=8.1e-16 Score=162.92 Aligned_cols=122 Identities=26% Similarity=0.407 Sum_probs=103.5
Q ss_pred cCceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 010550 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (507)
Q Consensus 260 ~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~ 339 (507)
....|.|+|+|++|++|+.+|..|.+||||++++++.. ++|+++++|+||.|||+|.|.+..+....|.|+|||+|.
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ 459 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC
Confidence 34578999999999999999999999999999997654 699999999999999999999987777889999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCc----eEEEEeccccccCCCCCCCccceEEEEEEEEEe
Q 010550 340 VGGHDRLGMQLVPLKLLTPHET----KEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (507)
Q Consensus 340 ~~~d~~lG~~~i~l~~l~~~~~----~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p 394 (507)
+++|++||++.+++.++..+.. ...|+++. ....|+|++++.+.-
T Consensus 460 ~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~----------~~~~G~i~l~~~l~l 508 (510)
T 3jzy_A 460 FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH----------EVPTGEVWVRFDLQL 508 (510)
T ss_dssp SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB----------SSSSCEEEEEEEEEE
T ss_pred CCCCCceEEEEEEHHHhccccCCCCceeeeecCC----------CCCCceEEEEEEEEE
Confidence 9999999999999999976433 45666652 346799998887653
No 40
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=5.5e-15 Score=128.25 Aligned_cols=95 Identities=19% Similarity=0.203 Sum_probs=79.8
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCCCCCCcEEEEEEc---
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGENHNNPYAIILYK--- 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~dPyv~v~~~--- 456 (507)
....|+|++++.|.+ ..+.|.|+|++|++....+.+||||++++.
T Consensus 9 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~ 56 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDC--------------------------------QKAELFVTRLEAVTSNHDGGCDCYVQGSVANRT 56 (138)
T ss_dssp CSSCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSSCCCEEEEEEEEETT
T ss_pred CCcceEEEEEEEEeC--------------------------------CCCEEEEEEEEEEcCCCCCCcceEEEEEEEcCC
Confidence 456799999999985 246799999999976666789999999994
Q ss_pred Ce-EEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 457 GD-KKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 ~~-~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
++ ++||+++++|+||+|||.|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 57 ~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~ 112 (138)
T 1wfm_A 57 GSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELR 112 (138)
T ss_dssp EEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEE
T ss_pred CcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEE
Confidence 22 4699999999999999999999876543 35899999998 689999985
No 41
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=3.8e-15 Score=133.22 Aligned_cols=89 Identities=18% Similarity=0.283 Sum_probs=74.5
Q ss_pred CceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecC-CCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 010550 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~ 339 (507)
.+.+.|+|+|++|+++. ..|.+||||+++ . +. .+|++++ ++.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-
Confidence 35789999999999884 258899999999 2 22 3566655 699999999999999864 457999999999
Q ss_pred CCCCCeeEEEEEECcccCCC
Q 010550 340 VGGHDRLGMQLVPLKLLTPH 359 (507)
Q Consensus 340 ~~~d~~lG~~~i~l~~l~~~ 359 (507)
+++|++||++.++|.++...
T Consensus 81 ~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCBC
T ss_pred CCCCceEEEEEEEHHHhccc
Confidence 88999999999999998643
No 42
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=2.3e-15 Score=132.13 Aligned_cols=95 Identities=27% Similarity=0.348 Sum_probs=80.0
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC----------CCCCc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----------NHNNP 449 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~----------~~~dP 449 (507)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||
T Consensus 9 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dp 56 (147)
T 2enp_A 9 KYQLGMLHFSTQYDL--------------------------------LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNP 56 (147)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCC
T ss_pred CCcceEEEEEEEEcC--------------------------------CCCEEEEEEEEEeCCCCccccccccccCCCCCc
Confidence 457899999999986 346799999999999863 36999
Q ss_pred EEEEEEcC---eEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 450 YAIILYKG---DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 450 yv~v~~~~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
||++++.. ++++|++++++.||+|||+|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 57 yv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~ 121 (147)
T 2enp_A 57 YVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVS 121 (147)
T ss_dssp EEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEE
T ss_pred EEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEE
Confidence 99999963 56799999999999999999998864322 24899999998 678999985
No 43
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.59 E-value=5.5e-15 Score=131.47 Aligned_cols=95 Identities=27% Similarity=0.490 Sum_probs=80.2
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 8 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~ 55 (159)
T 1tjx_A 8 LEKLGDICFSLRYVP--------------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLM 55 (159)
T ss_dssp GGCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred cCcCCeEEEEEEEcC--------------------------------CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEE
Confidence 456899999999987 346799999999999864 479999999996
Q ss_pred C-----eEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 457 G-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 ~-----~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
+ .+++|+++++|+||+|||.|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 56 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~ 115 (159)
T 1tjx_A 56 QNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVF 115 (159)
T ss_dssp ETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEE
T ss_pred eCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEE
Confidence 3 35699999999999999999999875433 24899999998 688999985
No 44
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.59 E-value=4.1e-15 Score=131.42 Aligned_cols=95 Identities=22% Similarity=0.382 Sum_probs=79.1
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC--CCCCcEEEEEEc-
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE--NHNNPYAIILYK- 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~--~~~dPyv~v~~~- 456 (507)
....|++.++++|.+ ..+.|.|+|.+|+||+.. +.+||||++++.
T Consensus 10 ~~~~G~~~lsL~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~ 57 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDA--------------------------------QDRVLLLHIIEGKGLISKQPGTCDPYVKISLIP 57 (153)
T ss_dssp ---CCCCEEEEEEEE--------------------------------SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEES
T ss_pred cCCCCEEEEEEEEEC--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEc
Confidence 567899999999998 356799999999999864 579999999993
Q ss_pred ----CeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC----C-CCeeeeEe
Q 010550 457 ----GDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK----R-TGVIGACG 506 (507)
Q Consensus 457 ----~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~----~-~~~iG~~~ 506 (507)
..+++|+++++|.||+|||.|.|.+........|.|+|||. . +++||++.
T Consensus 58 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~ 116 (153)
T 3fbk_A 58 EDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMS 116 (153)
T ss_dssp CSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEE
T ss_pred CCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEE
Confidence 34679999999999999999999985444456799999998 3 78999985
No 45
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.59 E-value=7e-15 Score=131.80 Aligned_cols=95 Identities=28% Similarity=0.503 Sum_probs=81.2
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 20 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~ 67 (166)
T 2cm5_A 20 IEERGKILVSLMYST--------------------------------QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK 67 (166)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred cCccceEEEEEEEEC--------------------------------CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEE
Confidence 456899999999986 246799999999999864 579999999997
Q ss_pred C-----eEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 457 G-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 ~-----~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
+ .+++|+++++|+||+|||.|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 68 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~ 127 (166)
T 2cm5_A 68 PDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQ 127 (166)
T ss_dssp TC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEE
T ss_pred CCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEE
Confidence 6 56799999999999999999999975433 35999999998 578999985
No 46
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.58 E-value=9.1e-15 Score=129.17 Aligned_cols=95 Identities=26% Similarity=0.385 Sum_probs=77.3
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|.+++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 13 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 60 (153)
T 1w15_A 13 PSGRGELLVSLCYQS--------------------------------TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLY 60 (153)
T ss_dssp ---CCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCC------CCCEEEEEEEE
T ss_pred CccccEEEEEEEEcC--------------------------------CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEE
Confidence 446799999999987 246799999999999863 578999999994
Q ss_pred --Ce---EEEeeeecCCCCCcccceEEEEecCCCCC-ceEEEEEEEC----CCCeeeeEe
Q 010550 457 --GD---KKRTKMIRKTRDPAWNEEFQFMLDEPPLH-EKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 --~~---~~kT~v~~~t~nP~wnE~f~f~v~~~~~~-~~L~v~V~d~----~~~~iG~~~ 506 (507)
+. ++||+++++|+||+|||+|.|.+...... ..|.|+|||+ ++++||++.
T Consensus 61 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~ 120 (153)
T 1w15_A 61 HAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLV 120 (153)
T ss_dssp ETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEE
T ss_pred eCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEE
Confidence 33 56999999999999999999999776443 5899999998 678999985
No 47
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=1e-14 Score=126.53 Aligned_cols=95 Identities=24% Similarity=0.399 Sum_probs=79.7
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC----CCCCcEEEEEE
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----NHNNPYAIILY 455 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~----~~~dPyv~v~~ 455 (507)
....|+|.+++.|.+ ..+.|.|+|++|+||+.. +.+||||++++
T Consensus 5 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~ 52 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNF--------------------------------ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTI 52 (138)
T ss_dssp CCCCCEEEEEEEEEG--------------------------------GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEE
T ss_pred CCccEEEEEEEEEEC--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEE
Confidence 456799999999986 246799999999999863 46899999999
Q ss_pred cC---eEEEeeeecCCCCCcccceEEEE-ecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 456 KG---DKKRTKMIRKTRDPAWNEEFQFM-LDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 456 ~~---~~~kT~v~~~t~nP~wnE~f~f~-v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
.+ ++++|+++++|.||+|||.|.|. +..... ...|.|+|||+ ++++||++.
T Consensus 53 ~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~ 112 (138)
T 1ugk_A 53 LPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVL 112 (138)
T ss_dssp ETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEE
T ss_pred ecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEE
Confidence 63 67899999999999999999995 654332 34899999997 688999985
No 48
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.58 E-value=1.3e-15 Score=134.68 Aligned_cols=94 Identities=14% Similarity=0.226 Sum_probs=79.1
Q ss_pred ccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC
Q 010550 381 KQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG 457 (507)
Q Consensus 381 ~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~ 457 (507)
...|+|++++.|.+ ..+.|.|+|++|+||+.+ +.+||||++++.+
T Consensus 27 ~~~G~l~~sl~y~~--------------------------------~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~ 74 (155)
T 2z0u_A 27 VGATRIQIALKYDE--------------------------------KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLP 74 (155)
T ss_dssp -CCEEEEEEEEEET--------------------------------TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEES
T ss_pred CCcEEEEEEEEEcC--------------------------------CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEec
Confidence 46799999999986 246799999999999863 5799999999965
Q ss_pred ---e---EEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 458 ---D---KKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 458 ---~---~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
. ++||+++++|+||+|||+|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 75 ~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~ 134 (155)
T 2z0u_A 75 CSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQ 134 (155)
T ss_dssp CSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEE
Confidence 2 6799999999999999999999865322 34899999997 678999985
No 49
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.58 E-value=6.7e-15 Score=129.27 Aligned_cols=95 Identities=22% Similarity=0.408 Sum_probs=80.7
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~----~~~~dPyv~v~~ 455 (507)
...+|+|.+++.|.+ ..+.|.|+|++|+||+. .+.+||||++++
T Consensus 6 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l 53 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQ--------------------------------QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYL 53 (148)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEE
T ss_pred CccceEEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEE
Confidence 456899999999986 35679999999999985 356999999999
Q ss_pred c-----CeEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 456 K-----GDKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 456 ~-----~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
. ..+++|+++++|+||+|||.|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 54 ~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~ 114 (148)
T 3fdw_A 54 LPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAE 114 (148)
T ss_dssp ETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEE
T ss_pred EcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEE
Confidence 6 347799999999999999999999876543 34799999998 688999985
No 50
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.58 E-value=7e-15 Score=127.39 Aligned_cols=92 Identities=30% Similarity=0.506 Sum_probs=78.5
Q ss_pred ceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC--
Q 010550 383 RGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG-- 457 (507)
Q Consensus 383 ~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~-- 457 (507)
+|+|.+++.|.+ ..+.|.|+|.+|+||+.. +.+||||++++.+
T Consensus 2 ~G~l~~sl~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~ 49 (138)
T 3n5a_A 2 RGELLLSLCYNP--------------------------------SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKD 49 (138)
T ss_dssp CCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETT
T ss_pred CcEEEEEEEEcC--------------------------------CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCC
Confidence 699999999986 346799999999999874 4799999999964
Q ss_pred ---eEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 458 ---DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 458 ---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
.+++|++++++.||+|||.|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 50 ~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~ 106 (138)
T 3n5a_A 50 KRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIY 106 (138)
T ss_dssp EEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEE
T ss_pred CccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEE
Confidence 35699999999999999999999876533 24899999998 578999985
No 51
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.57 E-value=7.4e-15 Score=125.74 Aligned_cols=93 Identities=25% Similarity=0.459 Sum_probs=77.6
Q ss_pred cceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEE---
Q 010550 382 QRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY--- 455 (507)
Q Consensus 382 ~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~--- 455 (507)
..|+|.+++.|.+ ..+.|.|+|.+|+||+.. +.+||||++++
T Consensus 3 ~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~ 50 (129)
T 2bwq_A 3 LSGQLSIKLWFDK--------------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD 50 (129)
T ss_dssp CCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS
T ss_pred eeEEEEEEEEEcc--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC
Confidence 4699999999986 246799999999999874 46899999999
Q ss_pred --cCeEEEeeeecCCCCCcccceEEEEecCCC--CCceEEEEEEEC----C--CCeeeeEe
Q 010550 456 --KGDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSK----R--TGVIGACG 506 (507)
Q Consensus 456 --~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~--~~~~L~v~V~d~----~--~~~iG~~~ 506 (507)
+..+++|+++++|.||+|||.|.|.+.... ....|.|+|||+ + +++||++.
T Consensus 51 ~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~ 111 (129)
T 2bwq_A 51 RSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEIL 111 (129)
T ss_dssp CSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEE
T ss_pred CCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEE
Confidence 456789999999999999999999963321 235899999998 3 88999985
No 52
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.56 E-value=5.6e-15 Score=159.81 Aligned_cols=108 Identities=28% Similarity=0.453 Sum_probs=97.8
Q ss_pred CceEEEEEEEEEeccccc---cCcCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEc
Q 010550 261 KPVGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~ 337 (507)
.+.|.|+|+|++|++|+. +|..|.+||||++++.+....+++|+++++++||+|||+|.|.+.....+.|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 467999999999999998 88889999999999987544567999999999999999999999876778999999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 010550 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (507)
Q Consensus 338 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 369 (507)
|.++ |++||++.++|.++..+.....|++|.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 9998 999999999999998887777888874
No 53
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.56 E-value=6.9e-15 Score=129.81 Aligned_cols=95 Identities=25% Similarity=0.368 Sum_probs=79.5
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 25 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 72 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDF--------------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLL 72 (152)
T ss_dssp -CCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred CCCceEEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEE
Confidence 346799999999986 246799999999999864 578999999994
Q ss_pred ---CeEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 457 ---GDKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 ---~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
.+++||++++++.||+|||.|.|.+..... ...|.|+|||+ ++++||++.
T Consensus 73 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~ 130 (152)
T 1rsy_A 73 PDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFK 130 (152)
T ss_dssp TTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEE
T ss_pred cCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEE
Confidence 457799999999999999999998864322 46899999998 688999985
No 54
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.56 E-value=1.8e-14 Score=124.62 Aligned_cols=78 Identities=28% Similarity=0.510 Sum_probs=67.6
Q ss_pred eEEEEEEeeeecCCCC---CCCCcEEEEEE-----cCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC---
Q 010550 429 GLLSVLVQGAEDVEGE---NHNNPYAIILY-----KGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK--- 497 (507)
Q Consensus 429 g~L~V~v~~a~~L~~~---~~~dPyv~v~~-----~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~--- 497 (507)
+.|.|+|++|+||+.. +.+||||++++ +..+++|++++++.||+|||.|.|.+........|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCC
Confidence 5699999999999863 57999999999 456789999999999999999999987654445899999997
Q ss_pred -CCCeeeeEe
Q 010550 498 -RTGVIGACG 506 (507)
Q Consensus 498 -~~~~iG~~~ 506 (507)
++++||++.
T Consensus 96 ~~~~~iG~~~ 105 (137)
T 3rdl_A 96 TRNDFMGSLS 105 (137)
T ss_dssp SCCEEEEEEE
T ss_pred CCCceEEEEE
Confidence 678999985
No 55
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.1e-14 Score=124.99 Aligned_cols=95 Identities=24% Similarity=0.386 Sum_probs=78.5
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 9 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 56 (141)
T 2d8k_A 9 RENLGRIQFSVGYNF--------------------------------QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLL 56 (141)
T ss_dssp CCCCCEEEEEEEECS--------------------------------SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEE
T ss_pred CceeeEEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEE
Confidence 446899999999986 235699999999999874 479999999995
Q ss_pred ---CeEEEeeeecCCCCCcccceEEEEecCCC--CCceEEEEEEEC----CCCeeeeEe
Q 010550 457 ---GDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 ---~~~~kT~v~~~t~nP~wnE~f~f~v~~~~--~~~~L~v~V~d~----~~~~iG~~~ 506 (507)
..++||++++++.||+|||.|.|.+.... ....|.|+|||+ ++++||++.
T Consensus 57 ~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~ 115 (141)
T 2d8k_A 57 PDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVS 115 (141)
T ss_dssp SCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEE
T ss_pred CCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEE
Confidence 35779999999999999999999853221 235899999998 678999985
No 56
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=1e-14 Score=126.86 Aligned_cols=95 Identities=24% Similarity=0.442 Sum_probs=78.8
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEE-
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY- 455 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~- 455 (507)
+...|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++
T Consensus 4 ~~~~G~i~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 51 (141)
T 1v27_A 4 GSSGGQLSIKLWFDK--------------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFL 51 (141)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCS
T ss_pred CCcccEEEEEEEEeC--------------------------------CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEe
Confidence 456899999999986 246799999999999864 46899999999
Q ss_pred ----cCeEEEeeeecCCCCCcccceEEEEecCC-C-CCceEEEEEEEC----C--CCeeeeEe
Q 010550 456 ----KGDKKRTKMIRKTRDPAWNEEFQFMLDEP-P-LHEKIHIEVMSK----R--TGVIGACG 506 (507)
Q Consensus 456 ----~~~~~kT~v~~~t~nP~wnE~f~f~v~~~-~-~~~~L~v~V~d~----~--~~~iG~~~ 506 (507)
+.++++|+++++|+||+|||.|.|.+... . ....|.|+|||+ . +++||++.
T Consensus 52 ~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~ 114 (141)
T 1v27_A 52 PDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEIL 114 (141)
T ss_dssp SCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEE
T ss_pred cCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEE
Confidence 34567999999999999999999995322 1 235899999998 3 89999985
No 57
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.55 E-value=7.4e-15 Score=128.03 Aligned_cols=95 Identities=25% Similarity=0.444 Sum_probs=78.4
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|.+++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 12 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 59 (142)
T 2chd_A 12 ATTLGALEFSLLYDQ--------------------------------DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLL 59 (142)
T ss_dssp --CCCEEEEEEEEEG--------------------------------GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEE
T ss_pred CCccceEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEE
Confidence 456799999999986 346799999999999874 478999999997
Q ss_pred C-----eEEEeeeecCCCCCcccceEEEE-ecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 457 G-----DKKRTKMIRKTRDPAWNEEFQFM-LDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 457 ~-----~~~kT~v~~~t~nP~wnE~f~f~-v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
+ .++||++++++.||+|||.|.|. +..... ...|.|+|||+ ++++||++.
T Consensus 60 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~ 120 (142)
T 2chd_A 60 PGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETR 120 (142)
T ss_dssp SCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEE
Confidence 5 67899999999999999999998 543211 25899999998 578999985
No 58
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.1e-14 Score=126.97 Aligned_cols=94 Identities=18% Similarity=0.391 Sum_probs=77.6
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 010550 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (507)
Q Consensus 380 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~ 456 (507)
....|+|++++.|.+ ..+.|.|+|++|+||+.. + +||||++++.
T Consensus 7 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~ 53 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSS--------------------------------QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLL 53 (142)
T ss_dssp SCSSCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEE
T ss_pred CCCcceEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEE
Confidence 456899999999986 246799999999999863 5 9999999994
Q ss_pred C-----eEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----C--CCeeeeEe
Q 010550 457 G-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----R--TGVIGACG 506 (507)
Q Consensus 457 ~-----~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~--~~~iG~~~ 506 (507)
. .+++|+++++|+||+|||.|.|.+..... ...|.|+|||+ . +++||++.
T Consensus 54 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~ 115 (142)
T 2dmg_A 54 PDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVL 115 (142)
T ss_dssp SCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEE
T ss_pred cCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEE
Confidence 3 56799999999999999999999854322 24899999998 2 36999985
No 59
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.55 E-value=1e-14 Score=127.32 Aligned_cols=94 Identities=27% Similarity=0.398 Sum_probs=79.6
Q ss_pred ccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEE--
Q 010550 381 KQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY-- 455 (507)
Q Consensus 381 ~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~-- 455 (507)
...|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++
T Consensus 18 ~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~ 65 (143)
T 3f04_A 18 EKLGKLQYSLDYDF--------------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP 65 (143)
T ss_dssp CCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEES
T ss_pred cCeEEEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEEC
Confidence 45799999999986 346799999999999874 47999999999
Q ss_pred -cCeEEEeeeecCCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeeeeEe
Q 010550 456 -KGDKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 456 -~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG~~~ 506 (507)
+.++++|+++++|.||+|||+|.|.+..... +..|.|+|||+ ++++||++.
T Consensus 66 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~ 122 (143)
T 3f04_A 66 DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFK 122 (143)
T ss_dssp CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEE
T ss_pred CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEE
Confidence 4457899999999999999999999865321 36899999998 678999985
No 60
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.54 E-value=2.6e-14 Score=125.63 Aligned_cols=78 Identities=27% Similarity=0.520 Sum_probs=67.6
Q ss_pred eEEEEEEeeeecCCCC---CCCCcEEEEEEcC-----eEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC---
Q 010550 429 GLLSVLVQGAEDVEGE---NHNNPYAIILYKG-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK--- 497 (507)
Q Consensus 429 g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~--- 497 (507)
+.|.|+|++|+||+.. +.+||||++++.+ .++||++++++.||+|||+|.|.+........|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~ 110 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 110 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCC
Confidence 4599999999999864 4789999999973 5679999999999999999999997654446899999998
Q ss_pred -CCCeeeeEe
Q 010550 498 -RTGVIGACG 506 (507)
Q Consensus 498 -~~~~iG~~~ 506 (507)
++++||++.
T Consensus 111 ~~~~~iG~~~ 120 (149)
T 1a25_A 111 SRNDFMGSLS 120 (149)
T ss_dssp SCCEEEEEEE
T ss_pred CCCCEEEEEE
Confidence 678999985
No 61
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3.7e-14 Score=123.20 Aligned_cols=80 Identities=28% Similarity=0.557 Sum_probs=71.3
Q ss_pred CceEEEEEEeeeecCCCC--CCCCcEEEEEEcCeEEEeeeecCCCCCcccceEEEEecCCC--CCceEEEEEEEC----C
Q 010550 427 GAGLLSVLVQGAEDVEGE--NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSK----R 498 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~--~~~dPyv~v~~~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~--~~~~L~v~V~d~----~ 498 (507)
..|.|.|+|++|+||+.. +.+||||++++++++++|++++++.||+|||.|.|.+..+. ....|.|+|||+ +
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~ 84 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQ 84 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSS
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCC
Confidence 568999999999999864 47999999999999999999999999999999999997653 246999999998 6
Q ss_pred CCeeeeEe
Q 010550 499 TGVIGACG 506 (507)
Q Consensus 499 ~~~iG~~~ 506 (507)
+++||++.
T Consensus 85 ~~~lG~~~ 92 (140)
T 2dmh_A 85 NKLIGTAT 92 (140)
T ss_dssp CCCCEEEE
T ss_pred CceEEEEE
Confidence 78999985
No 62
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.53 E-value=3.2e-14 Score=121.24 Aligned_cols=78 Identities=26% Similarity=0.514 Sum_probs=69.4
Q ss_pred ceEEEEEEeeeecCCCC------CCCCcEEEEEEcC---eEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC-
Q 010550 428 AGLLSVLVQGAEDVEGE------NHNNPYAIILYKG---DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK- 497 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~------~~~dPyv~v~~~~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~- 497 (507)
+|.|.|+|++|+||+.. +.+||||++++++ ++++|++++++.||+|||.|.|.+..+ ....|.|+|||+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECC
Confidence 67899999999999972 6899999999986 678999999999999999999999765 357999999998
Q ss_pred --CCCeeeeEe
Q 010550 498 --RTGVIGACG 506 (507)
Q Consensus 498 --~~~~iG~~~ 506 (507)
++++||++.
T Consensus 81 ~~~~~~iG~~~ 91 (126)
T 1rlw_A 81 YVMDETLGTAT 91 (126)
T ss_dssp SSCCEEEEEEE
T ss_pred CCCCceeEEEE
Confidence 688999985
No 63
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.52 E-value=6.4e-14 Score=136.75 Aligned_cols=95 Identities=39% Similarity=0.572 Sum_probs=82.8
Q ss_pred ceEEEEEEEEEeccccccCcCCCCCcEEEEEEcC--ccCCceeeeecCCCCCCeEeeEEEEEeecCC--CCeEEEEEEEc
Q 010550 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG--EKLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQVFDW 337 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~--~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~V~d~ 337 (507)
..+.|.|+|++|++|+.+|..|.+||||++++.+ ....+++|++++++.||.|||+|.|.+.... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 4588999999999999999899999999999853 2334578999999999999999999986433 45799999999
Q ss_pred CCCCCCCeeEEEEEECccc
Q 010550 338 DKVGGHDRLGMQLVPLKLL 356 (507)
Q Consensus 338 ~~~~~d~~lG~~~i~l~~l 356 (507)
+.+++|++||++.+++..+
T Consensus 228 d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp CSSSCCCEEEEEEEETTCC
T ss_pred CCCCCCcEEEEEEECCCCC
Confidence 9999999999999999864
No 64
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.52 E-value=3.6e-14 Score=122.15 Aligned_cols=79 Identities=23% Similarity=0.528 Sum_probs=71.2
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC----C
Q 010550 426 SGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK----R 498 (507)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~----~ 498 (507)
...|.|.|+|++|+||+.. +.+||||++++++++++|++++++.||+|||.|.|.+.++ .+.|.|+|||+ +
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~--~~~l~i~V~d~d~~~~ 87 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI--HDVLEVTVFDEDGDKP 87 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT--TCEEEEEEEEEETTEE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC--CCEEEEEEEECCCCCC
Confidence 4679999999999999864 5799999999999999999999999999999999999865 47899999998 5
Q ss_pred CCeeeeEe
Q 010550 499 TGVIGACG 506 (507)
Q Consensus 499 ~~~iG~~~ 506 (507)
+++||++.
T Consensus 88 ~~~lG~~~ 95 (133)
T 2ep6_A 88 PDFLGKVA 95 (133)
T ss_dssp EEECCBCE
T ss_pred CCeeEEEE
Confidence 78999874
No 65
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.52 E-value=2.7e-14 Score=125.97 Aligned_cols=78 Identities=21% Similarity=0.333 Sum_probs=68.5
Q ss_pred CCceEEEEEEeeeecCCCC-------------CCCCcEEEEEEcCeE-EEeeeecCCCCCcccceEEEEecCCCCCceEE
Q 010550 426 SGAGLLSVLVQGAEDVEGE-------------NHNNPYAIILYKGDK-KRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIH 491 (507)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~-------------~~~dPyv~v~~~~~~-~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~ 491 (507)
...|.|+|+|.+|+||+.+ +.+||||++.+++++ .||+++++|+||+|||.|+|.+.+. ..|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~---~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG---GHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC---CEEE
Confidence 4679999999999999853 358999999999876 5999999999999999999998653 6899
Q ss_pred EEEEEC----CCCeeeeEe
Q 010550 492 IEVMSK----RTGVIGACG 506 (507)
Q Consensus 492 v~V~d~----~~~~iG~~~ 506 (507)
|+|||+ .|++||++.
T Consensus 103 ~~V~D~d~~~~dd~iG~~~ 121 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCT 121 (157)
T ss_dssp EEEEECCSSSSCEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEE
Confidence 999998 588999985
No 66
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.51 E-value=1e-13 Score=148.75 Aligned_cols=123 Identities=22% Similarity=0.378 Sum_probs=100.4
Q ss_pred ceEEEEEEEEEeccccccCc--CCCCCcEEEEEEcCc--cCCceeeeecCCC-CCCeEeeEEEEEeecCCCCeEEEEEEE
Q 010550 262 PVGILHVKVVRASKLLKKDF--LGTSDPYVKLSLTGE--KLPWKKTTVKKKN-LNPEWNENFKLVVKEPESQILQLQVFD 336 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~--~g~~dpyv~v~l~~~--~~~~~~T~v~~~t-~nP~Wne~f~f~v~~~~~~~L~v~V~d 336 (507)
..+.|+|+|++|++|+..+. .+.+||||++.+.+. ...+++|++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999999874 688999999999653 2235789999987 999999999999987766799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCC-ccceEEEEEEEEE
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDM-KQRGKIVVELTYV 393 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~G~i~l~l~~~ 393 (507)
+|.+++|++||++.++|..+..+. .+++|... .+. -..|.|.+++.|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~------~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSK------NGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECT------TSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCC------CcCCCCceEEEEEEEEE
Confidence 999999999999999999998752 35665321 112 2468888888774
No 67
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.48 E-value=7.3e-14 Score=120.68 Aligned_cols=79 Identities=22% Similarity=0.498 Sum_probs=71.2
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeec-CCCCCcccceEEEEecCCCCCceEEEEEEEC----
Q 010550 426 SGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK---- 497 (507)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~---- 497 (507)
...|.|.|+|++|+||+.. +.+||||++++++++++|++++ ++.||+|||.|.|.+... .+.|.|+|||+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~--~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEG--TTELKAKIFDKDVGT 84 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESS--CCEEEEEECCSSSCT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCC--CCEEEEEEEECCCCC
Confidence 3679999999999999874 4799999999999999999998 899999999999999863 57999999998
Q ss_pred CCCeeeeEe
Q 010550 498 RTGVIGACG 506 (507)
Q Consensus 498 ~~~~iG~~~ 506 (507)
+|++||++.
T Consensus 85 ~d~~lG~~~ 93 (136)
T 1wfj_A 85 EDDAVGEAT 93 (136)
T ss_dssp TTCCSEEEE
T ss_pred CCceEEEEE
Confidence 689999985
No 68
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.48 E-value=1.2e-13 Score=124.33 Aligned_cols=76 Identities=24% Similarity=0.374 Sum_probs=65.4
Q ss_pred eEEEEEEeeeecCCCC----CCCCcEEEEEEcCe-----EEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEE-EC-
Q 010550 429 GLLSVLVQGAEDVEGE----NHNNPYAIILYKGD-----KKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVM-SK- 497 (507)
Q Consensus 429 g~L~V~v~~a~~L~~~----~~~dPyv~v~~~~~-----~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~-d~- 497 (507)
+.|.|+|++|+||+.. +.+||||++++.+. ++||+++++|+||+|||+|.|.+... ...|.|+|| |+
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ--GKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT--TEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC--CCEEEEEEEEcCC
Confidence 4699999999999853 57999999999642 67999999999999999999998543 579999999 87
Q ss_pred ---CCCeeeeEe
Q 010550 498 ---RTGVIGACG 506 (507)
Q Consensus 498 ---~~~~iG~~~ 506 (507)
++++||++.
T Consensus 108 ~~~~d~~iG~~~ 119 (171)
T 2q3x_A 108 RMDHKCFMGVAQ 119 (171)
T ss_dssp TTCSSEEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 678999985
No 69
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.47 E-value=2.4e-13 Score=119.25 Aligned_cols=80 Identities=24% Similarity=0.459 Sum_probs=70.5
Q ss_pred CCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEECC---
Q 010550 425 LSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKR--- 498 (507)
Q Consensus 425 ~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~~--- 498 (507)
....|.|.|+|++|+||+.. +.+||||++++++++++|+++++|.||.|||.|.|.+..+ .+.|.++|||++
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS--SDRIKVRVLDEDDDI 90 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST--TCEEEEEEEECCCSH
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC--CCEEEEEEEECCCCc
Confidence 33579999999999999874 5799999999999999999999999999999999999876 478999999982
Q ss_pred ------------CCeeeeEe
Q 010550 499 ------------TGVIGACG 506 (507)
Q Consensus 499 ------------~~~iG~~~ 506 (507)
+++||++.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~ 110 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTI 110 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEE
T ss_pred cccccccccCCCCccEEEEE
Confidence 67999875
No 70
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.46 E-value=1.1e-13 Score=119.42 Aligned_cols=79 Identities=27% Similarity=0.460 Sum_probs=66.6
Q ss_pred ceEEEEEEeeeecCCC--CCCCCcEEEEEE-----cCeEEEeeeecCCCCCcccceEEEE-ecCCC-CCceEEEEEEEC-
Q 010550 428 AGLLSVLVQGAEDVEG--ENHNNPYAIILY-----KGDKKRTKMIRKTRDPAWNEEFQFM-LDEPP-LHEKIHIEVMSK- 497 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~--~~~~dPyv~v~~-----~~~~~kT~v~~~t~nP~wnE~f~f~-v~~~~-~~~~L~v~V~d~- 497 (507)
.+.|.|+|.+|+||+. .+.+||||++++ ...++||+++++|+||+|||+|.|. +.... ....|.|+|||+
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 4679999999999986 357999999999 3456799999999999999999999 75432 235899999998
Q ss_pred ---CCCeeeeEe
Q 010550 498 ---RTGVIGACG 506 (507)
Q Consensus 498 ---~~~~iG~~~ 506 (507)
++++||++.
T Consensus 99 ~~~~~~~lG~~~ 110 (134)
T 2b3r_A 99 SLRENFFLGGIT 110 (134)
T ss_dssp SSSCCEEEEEEE
T ss_pred CCCCCcEEEEEE
Confidence 578999985
No 71
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.45 E-value=3.1e-14 Score=124.00 Aligned_cols=92 Identities=18% Similarity=0.407 Sum_probs=76.1
Q ss_pred ccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCcccCCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC
Q 010550 381 KQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG 457 (507)
Q Consensus 381 ~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~ 457 (507)
...|+|++++.|.. |.|.|+|++|+||+.. +.+||||++++.+
T Consensus 4 ~~~G~i~~~l~y~~----------------------------------~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~ 49 (142)
T 1rh8_A 4 PITGEIQLQINYDL----------------------------------GNLIIHILQARNLVPRDNNGYSDPFVKVYLLP 49 (142)
T ss_dssp CCCCEEEEEEEEET----------------------------------TEEEEEEEEEESCCCCSSSSCSCCEEEEEETT
T ss_pred CcceEEEEEEEEcC----------------------------------CEEEEEEEEecCCCCCCCCCCCCceEEEEEec
Confidence 46899999998871 3599999999999874 5799999999986
Q ss_pred e--------------EEEeeeecCCCCCcccceEEEE-ecCCC-CCceEEEEEEEC----CCCeeeeEe
Q 010550 458 D--------------KKRTKMIRKTRDPAWNEEFQFM-LDEPP-LHEKIHIEVMSK----RTGVIGACG 506 (507)
Q Consensus 458 ~--------------~~kT~v~~~t~nP~wnE~f~f~-v~~~~-~~~~L~v~V~d~----~~~~iG~~~ 506 (507)
. ++||+++++|+||+|||.|.|. +.... ....|.|+|||+ ++++||++.
T Consensus 50 ~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~ 118 (142)
T 1rh8_A 50 GRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVL 118 (142)
T ss_dssp SSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEE
Confidence 3 4699999999999999999997 54221 245899999997 578999985
No 72
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.45 E-value=3.3e-13 Score=115.94 Aligned_cols=76 Identities=22% Similarity=0.476 Sum_probs=66.6
Q ss_pred ceEEEEEEeeeecCCCC---CCCCcEEEEEEcC--eEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC---C-
Q 010550 428 AGLLSVLVQGAEDVEGE---NHNNPYAIILYKG--DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK---R- 498 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~--~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~---~- 498 (507)
...|.|+|++|++|+.. +.+||||++++++ +.++|+++++|+||+|||.|.|.+... +.|.|+|||+ .
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGGTTS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCCCCC
Confidence 45799999999999864 5799999999975 678999999999999999999999775 4599999998 2
Q ss_pred ---CCeeeeEe
Q 010550 499 ---TGVIGACG 506 (507)
Q Consensus 499 ---~~~iG~~~ 506 (507)
|++||++.
T Consensus 81 ~~~d~~lG~~~ 91 (132)
T 3pyc_A 81 KQGAGFLGCVR 91 (132)
T ss_dssp STTTTEEEEEE
T ss_pred CCCCCceEEEE
Confidence 79999985
No 73
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.45 E-value=1.3e-13 Score=119.19 Aligned_cols=77 Identities=23% Similarity=0.398 Sum_probs=67.4
Q ss_pred CceEEEEEEeeeecCCCCC--------------CCCcEEEEEEcCeE-EEeeeecCCCCCcccceEEEEecCCCCCceEE
Q 010550 427 GAGLLSVLVQGAEDVEGEN--------------HNNPYAIILYKGDK-KRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIH 491 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~--------------~~dPyv~v~~~~~~-~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~ 491 (507)
..|.|.|+|++|+||+..+ .+||||++++++.+ .+|+++++|+||+|||.|+|.+... +.|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~---~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG---RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC---CEEE
Confidence 4689999999999998632 29999999998876 5999999999999999999998754 7899
Q ss_pred EEEEEC----CCCeeeeEe
Q 010550 492 IEVMSK----RTGVIGACG 506 (507)
Q Consensus 492 v~V~d~----~~~~iG~~~ 506 (507)
++|||+ +|++||++.
T Consensus 81 ~~V~d~d~~~~dd~iG~~~ 99 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCT 99 (136)
T ss_dssp EEEEECCSSSSCEEEEEEE
T ss_pred EEEEeCCCCCCCCEEEEEE
Confidence 999998 588999985
No 74
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.45 E-value=3.4e-13 Score=118.97 Aligned_cols=79 Identities=23% Similarity=0.463 Sum_probs=67.0
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC------eEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEE
Q 010550 426 SGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG------DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMS 496 (507)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~------~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d 496 (507)
...+.|.|+|++|+||+.. +.+||||++++.+ .+++|++++++.||+|||.|.|.+... ...|.|+|||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~l~~~V~d 94 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ--QHRLLFEVFD 94 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT--TCEEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC--CCEEEEEEEE
Confidence 4678999999999999864 4799999999974 467999999999999999999999864 4789999999
Q ss_pred C----CCCeeeeEe
Q 010550 497 K----RTGVIGACG 506 (507)
Q Consensus 497 ~----~~~~iG~~~ 506 (507)
+ ++++||++.
T Consensus 95 ~d~~~~d~~iG~~~ 108 (153)
T 3b7y_A 95 ENRLTRDDFLGQVD 108 (153)
T ss_dssp CCSSSCCEEEEEEE
T ss_pred CCCCcCCCeeEEEE
Confidence 8 678999985
No 75
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.45 E-value=3.5e-13 Score=121.30 Aligned_cols=77 Identities=22% Similarity=0.390 Sum_probs=68.4
Q ss_pred CceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC----CC
Q 010550 427 GAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK----RT 499 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~----~~ 499 (507)
..+.|.|+|.+|++|+.+ +.+||||+++++++++||+++++|+||+|||.|.|.+.. .+.|.|+|||+ ++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~~~~d 110 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQTLKSD 110 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCSSSCC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCCCCCC
Confidence 568899999999999832 359999999999988999999999999999999999842 57999999998 67
Q ss_pred CeeeeEe
Q 010550 500 GVIGACG 506 (507)
Q Consensus 500 ~~iG~~~ 506 (507)
++||++.
T Consensus 111 d~lG~~~ 117 (173)
T 2nq3_A 111 VLLGTAA 117 (173)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 8999985
No 76
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.44 E-value=3.1e-14 Score=139.91 Aligned_cols=97 Identities=35% Similarity=0.539 Sum_probs=84.8
Q ss_pred CceEEEEEEEEEeccccccCcCCCCCcEEEEEEcC--ccCCceeeeecCCCCCCeEeeEEEEEeecCC--CCeEEEEEEE
Q 010550 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG--EKLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQVFD 336 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~--~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~V~d 336 (507)
...|.|+|+|++|++|+.+|..|.+||||++++.+ ....+++|++++++.||.|||+|.|.+.... ...|.|+|||
T Consensus 149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 35689999999999999999999999999999973 3345679999999999999999999886432 4579999999
Q ss_pred cCCCCCCCeeEEEEEECcccC
Q 010550 337 WDKVGGHDRLGMQLVPLKLLT 357 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~ 357 (507)
++.+++|++||++.+++.++.
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTC
T ss_pred CCCCCCCceEEEEEECCccCC
Confidence 999999999999999998774
No 77
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.43 E-value=4.4e-13 Score=121.21 Aligned_cols=78 Identities=24% Similarity=0.444 Sum_probs=67.5
Q ss_pred CceEEEEEEeeeecCCCC---CCCCcEEEEEEcC------eEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC
Q 010550 427 GAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG------DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK 497 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~------~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~ 497 (507)
..|.|.|+|++|+||+.. +.+||||++++++ ++++|+++++++||+|||.|.|.+... ...|.|+|||+
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~--~~~L~~~V~d~ 83 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ--RHRILFEVFDE 83 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT--TCEEEEEEEEC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC--CCEEEEEEEEC
Confidence 679999999999999863 5799999999976 567999999999999999999999854 46899999998
Q ss_pred ----CCCeeeeEe
Q 010550 498 ----RTGVIGACG 506 (507)
Q Consensus 498 ----~~~~iG~~~ 506 (507)
++++||++.
T Consensus 84 d~~~~d~~lG~~~ 96 (176)
T 3m7f_B 84 NRLTRDDFLGQVD 96 (176)
T ss_dssp C----CEEEEEEE
T ss_pred CCCCCCcEEEEEE
Confidence 678999985
No 78
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.42 E-value=3.7e-13 Score=115.43 Aligned_cols=76 Identities=21% Similarity=0.357 Sum_probs=63.5
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcCeEEEeeeec-CCCCCcccceEEEEecCCCCCceEEEEEEEC---CCCee
Q 010550 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK---RTGVI 502 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dPyv~v~~~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~---~~~~i 502 (507)
..+.|.|+|++|++++..+.+||||+++ +++.||++++ ++.||+|||.|.|.+... ...|.|+|||+ +|++|
T Consensus 3 ~~~~L~V~V~~A~~l~~~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d~~~dd~i 78 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKGLIWDTMV 78 (131)
T ss_dssp CCEEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC--SSEEEEEEEECCSSCEEEE
T ss_pred cceEEEEEEEEeECCCCCCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC--CCeEEEEEEECCCCCCCeE
Confidence 3578999999999997667899999999 3344555554 799999999999999864 46899999998 68899
Q ss_pred eeEe
Q 010550 503 GACG 506 (507)
Q Consensus 503 G~~~ 506 (507)
|++.
T Consensus 79 G~~~ 82 (131)
T 2cjt_A 79 GTVW 82 (131)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
No 79
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.41 E-value=1.8e-14 Score=150.67 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=22.4
Q ss_pred CceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCCceeeeecCCC---CCCeEeeEEEEEeecCCCCeEEEEEEEc
Q 010550 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKN---LNPEWNENFKLVVKEPESQILQLQVFDW 337 (507)
Q Consensus 261 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t---~nP~Wne~f~f~v~~~~~~~L~v~V~d~ 337 (507)
...|.|+|+|++|++|+++| ||||++++++... .||+++++| .||.|||+|.|.+... ...|.++|||+
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC----------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 34689999999999999876 9999999987543 589999999 9999999999987543 57899999995
Q ss_pred -C---CCCCCCeeEEEEEECcccCCCCceEEEEeccccccCC-----------------CCCCCccceEEEEEEEEEecc
Q 010550 338 -D---KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNIS-----------------DPKDMKQRGKIVVELTYVPFK 396 (507)
Q Consensus 338 -~---~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~G~i~l~l~~~p~~ 396 (507)
| +.++|++||++.+++.++..+.....|++|....... ..++....|.|++++.|.+..
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp ---------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 4 3678999999999999999877778888874322100 001123569999999998754
No 80
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.37 E-value=8.1e-13 Score=118.03 Aligned_cols=75 Identities=21% Similarity=0.364 Sum_probs=63.8
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEEcCeEEEeeeec-CCCCCcccceEEEEecCCCCCceEEEEEEEC---CCCeee
Q 010550 428 AGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK---RTGVIG 503 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dPyv~v~~~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~---~~~~iG 503 (507)
.+.|.|+|++|++++..+.+||||+++ +++.||++++ ++.||+|||.|.|.+... ...|.|+|||+ .|++||
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d~~~dd~iG 88 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKGLIWDTMVG 88 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT--TSEEEEEEEECCSSCCEEEE
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC--CCEEEEEEEECCCCCCceEE
Confidence 468999999999997667899999999 3445676665 699999999999999864 46899999998 789999
Q ss_pred eEe
Q 010550 504 ACG 506 (507)
Q Consensus 504 ~~~ 506 (507)
++.
T Consensus 89 ~~~ 91 (167)
T 2cjs_A 89 TVW 91 (167)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 81
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.32 E-value=3.6e-12 Score=108.09 Aligned_cols=75 Identities=15% Similarity=0.326 Sum_probs=67.6
Q ss_pred EEEEEEeeeecCCCCCCCCcEEEEEEcCeEEEeeeec-CCCCCcccceEEEEecCCCC-CceEEEEEEEC----CCCeee
Q 010550 430 LLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSK----RTGVIG 503 (507)
Q Consensus 430 ~L~V~v~~a~~L~~~~~~dPyv~v~~~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~-~~~L~v~V~d~----~~~~iG 503 (507)
.|+|.|.+|.+|++ .+|||+++++.+.++||++++ .+.||+|||.|+|.+..+.. ++.|.|+|+|. ++++||
T Consensus 22 sL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG 99 (144)
T 3l9b_A 22 ALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIG 99 (144)
T ss_dssp EEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCEEEE
T ss_pred EEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCCEEE
Confidence 59999999999996 699999999999999999998 59999999999999987533 34999999998 889999
Q ss_pred eEe
Q 010550 504 ACG 506 (507)
Q Consensus 504 ~~~ 506 (507)
++.
T Consensus 100 ~~~ 102 (144)
T 3l9b_A 100 TFR 102 (144)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.29 E-value=6.7e-12 Score=131.83 Aligned_cols=80 Identities=20% Similarity=0.420 Sum_probs=70.1
Q ss_pred CceEEEEEEeeeecCCC--CCCCCcEEEEEEcCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC----CCC
Q 010550 427 GAGLLSVLVQGAEDVEG--ENHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK----RTG 500 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~--~~~~dPyv~v~~~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~----~~~ 500 (507)
..|.|.|+|++|+||++ .+.+||||+|++++++.||+++++++||+|||.|.|.+...+..+.|.|+|||+ +|+
T Consensus 392 ~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD 471 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 471 (540)
T ss_dssp TEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCE
T ss_pred cccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCC
Confidence 46799999999999986 247999999999999999999999999999999999865433467999999998 678
Q ss_pred eeeeEe
Q 010550 501 VIGACG 506 (507)
Q Consensus 501 ~iG~~~ 506 (507)
+||++.
T Consensus 472 ~LG~~~ 477 (540)
T 3nsj_A 472 LLGSCD 477 (540)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999985
No 83
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=1.2e-11 Score=135.01 Aligned_cols=108 Identities=34% Similarity=0.506 Sum_probs=91.8
Q ss_pred ceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc--cCCceeeeecCCCCCCeEeeEEEEEeecCC-CCeEEEEEEEcC
Q 010550 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~V~d~~ 338 (507)
..+.|.|++.+|++|..+|..|.+||||++++.+. ...+++|+++++++||.|||+|.|.+.... ...|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 35789999999999999999999999999999543 234579999999999999999999987433 456999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 010550 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (507)
Q Consensus 339 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 370 (507)
..++|++||++.+++.++.... ...|+.+..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccccccccccccchhhhccCC-cccceeecc
Confidence 9999999999999999998654 466777643
No 84
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.17 E-value=8.5e-11 Score=124.27 Aligned_cols=79 Identities=24% Similarity=0.458 Sum_probs=70.6
Q ss_pred CceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC----CC
Q 010550 427 GAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK----RT 499 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~---~~~dPyv~v~~~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~----~~ 499 (507)
..|.|.|+|.+|+||+.+ +.+||||++++++++++|+++++|+||+|||.|.|.+..+ ..+.|.|+|||+ +|
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL-YQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCT-TTCEEEEEEEECCSSSSC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCC-CCCEEEEEEEeCCCCCCC
Confidence 568999999999999764 5799999999999999999999999999999999999765 346899999998 68
Q ss_pred CeeeeEe
Q 010550 500 GVIGACG 506 (507)
Q Consensus 500 ~~iG~~~ 506 (507)
++||++.
T Consensus 464 d~lG~~~ 470 (510)
T 3jzy_A 464 DFLGRTE 470 (510)
T ss_dssp CEEEEEE
T ss_pred CceEEEE
Confidence 9999985
No 85
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.14 E-value=2e-10 Score=126.26 Aligned_cols=120 Identities=18% Similarity=0.283 Sum_probs=91.1
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc---cCCceeeeecCC-CCCCeEee-EEEEE-eecCCCCeEEEEEEE
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTTVKKK-NLNPEWNE-NFKLV-VKEPESQILQLQVFD 336 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~---~~~~~~T~v~~~-t~nP~Wne-~f~f~-v~~~~~~~L~v~V~d 336 (507)
...|.|+|++|++|+.. .+||||++.+.+. ...+++|+++++ +.||+||| +|.|. +..++...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34799999999999853 6899999999752 112368998875 59999999 69998 766666789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEEeccCC
Q 010550 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKED 398 (507)
Q Consensus 337 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~~~ 398 (507)
+| +++||++.+||..|..+- ..++|... ....-..|.|.+.+.+.....+
T Consensus 800 ~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~-----~g~~l~~atLfv~i~~~~~~~~ 849 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGY---HYVCLRNE-----ANQPLCLPALLIYTEASDYIPD 849 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEE---EEEEEECT-----TSCEEEEEEEEEEEEEEECCCG
T ss_pred CC----ccEEeeEEEEHHHcCCCc---eEEEecCC-----CCCccCceEEEEEEEEEecCCc
Confidence 86 789999999999998762 23444321 0112256899999998865433
No 86
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.12 E-value=2.9e-10 Score=124.95 Aligned_cols=115 Identities=22% Similarity=0.332 Sum_probs=87.3
Q ss_pred ceEEEEEEEEEeccccccCcCCCCCcEEEEEEcCc---cCCceeee-ecC-CCCCCeEee-EEEE-EeecCCCCeEEEEE
Q 010550 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTT-VKK-KNLNPEWNE-NFKL-VVKEPESQILQLQV 334 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~---~~~~~~T~-v~~-~t~nP~Wne-~f~f-~v~~~~~~~L~v~V 334 (507)
..|.|.|+|++|++|+. +.+||||++.+.+. ...+++|+ +++ ++.||+||| +|.| .+..++...|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 36899999999999984 46899999999542 22346898 776 569999999 7999 88766667899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCC-ccceEEEEEEEEE
Q 010550 335 FDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDM-KQRGKIVVELTYV 393 (507)
Q Consensus 335 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~G~i~l~l~~~ 393 (507)
||++ +++||++.+||..|..+ ..+++|... .+. -..+.|.+.+.+.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G---~r~v~L~~~------~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG---YHHLCLHSE------SNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE---EEEEEEECT------TCCEEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCC---cEEEeccCC------CCCCCCceEEEEEEEEE
Confidence 9986 78999999999999865 234555321 111 2347777777664
No 87
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.11 E-value=4.4e-10 Score=122.90 Aligned_cols=119 Identities=18% Similarity=0.307 Sum_probs=90.2
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccC----CceeeeecCC-CCCCeEeeE-EEEE-eecCCCCeEEEEEE
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL----PWKKTTVKKK-NLNPEWNEN-FKLV-VKEPESQILQLQVF 335 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~----~~~~T~v~~~-t~nP~Wne~-f~f~-v~~~~~~~L~v~V~ 335 (507)
.+.|+|+|++|++|+.+ .+||||++.+.+... .+++|+++++ +.||+|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999753 689999999975321 3468998875 699999998 9998 77666678999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccceEEEEEEEEEeccC
Q 010550 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKE 397 (507)
Q Consensus 336 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p~~~ 397 (507)
|++ +++||++.+||+.|..+- ..++|... ....-..++|.+.+.+.....
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~-----~g~~~~~atLfv~i~~~~~~~ 774 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRNE-----SNRPLGLASVFAHIVAKDYVS 774 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEECT-----TSCEEEEEEEEEEEEEEECCC
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeCC-----CCCCCCceEEEEEEEEEecCc
Confidence 985 789999999999998762 23444321 111223478888888775443
No 88
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.04 E-value=2.8e-10 Score=123.22 Aligned_cols=79 Identities=25% Similarity=0.491 Sum_probs=70.2
Q ss_pred CceEEEEEEeeeecCCC---C---CCCCcEEEEEEcC---eEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC
Q 010550 427 GAGLLSVLVQGAEDVEG---E---NHNNPYAIILYKG---DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK 497 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~---~---~~~dPyv~v~~~~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~ 497 (507)
..+.|.|+|++|++|+. + +.+||||++++++ .++||+++++++||+|||.|.|.+..+ ..+.|.|+|||+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D~ 94 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDA 94 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEEC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEEC
Confidence 57899999999999987 3 5799999999984 578999999999999999999999875 356999999998
Q ss_pred ---CCCeeeeEe
Q 010550 498 ---RTGVIGACG 506 (507)
Q Consensus 498 ---~~~~iG~~~ 506 (507)
+|++||++.
T Consensus 95 D~~~ddfIG~v~ 106 (749)
T 1cjy_A 95 NYVMDETLGTAT 106 (749)
T ss_dssp CSSSCEEEEEEC
T ss_pred CCCCCceeEEEE
Confidence 588999985
No 89
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.01 E-value=8e-10 Score=118.60 Aligned_cols=79 Identities=20% Similarity=0.374 Sum_probs=68.8
Q ss_pred CceEEEEEEeeeecCCCC-----CCCCcEEEEEEcC-----eEEEeeeecCC-CCCcccceEEEEecCCCCCceEEEEEE
Q 010550 427 GAGLLSVLVQGAEDVEGE-----NHNNPYAIILYKG-----DKKRTKMIRKT-RDPAWNEEFQFMLDEPPLHEKIHIEVM 495 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~-----~~~dPyv~v~~~~-----~~~kT~v~~~t-~nP~wnE~f~f~v~~~~~~~~L~v~V~ 495 (507)
..+.|.|+|++|++|+.. +.+||||+|++.+ .++||++++++ .||+|||+|+|.+..+. ...|.++||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e-l~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPD-LALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGG-GCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCC-CCEEEEEEE
Confidence 578999999999999863 4799999999965 46799999997 99999999999998763 368999999
Q ss_pred EC----CCCeeeeEe
Q 010550 496 SK----RTGVIGACG 506 (507)
Q Consensus 496 d~----~~~~iG~~~ 506 (507)
|+ ++++||++.
T Consensus 574 D~D~~~~dd~iG~~~ 588 (624)
T 1djx_A 574 DYDSSSKNDFIGQST 588 (624)
T ss_dssp ECCSSSCCEEEEEEE
T ss_pred EcCCCCCCceeEEEE
Confidence 98 688999974
No 90
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.01 E-value=3.6e-09 Score=86.94 Aligned_cols=113 Identities=19% Similarity=0.318 Sum_probs=85.2
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEEcCccCC-ceee-eecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCCC
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLP-WKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~-~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~~~ 340 (507)
.+.|+|.+.++.--.-+......||||.+.+...... ..+| ..+++|..|+|||+|.-.+.+ .+.|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 3578888866653222222346899999999744321 2355 777899999999999998875 5789999997653
Q ss_pred CCCCeeEEEEEECcccC-----CCCceEEEEeccccccCCCCCCCccceEEEEEEEEE
Q 010550 341 GGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (507)
Q Consensus 341 ~~d~~lG~~~i~l~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~ 393 (507)
++++.|.+++.+|. .+...+.|++| ++.|+|++.+.|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------QPQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------BSSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEe
Confidence 89999999999998 34556788876 4689999999987
No 91
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.91 E-value=7.5e-09 Score=86.19 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=87.1
Q ss_pred ceEEEEEEEEEeccccccC-cCCCCCcEEEEEEcCccC-Cceee-eecCCCCCCeEeeEEEEEeecCCCCeEEEEEEEcC
Q 010550 262 PVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKL-PWKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWD 338 (507)
Q Consensus 262 ~~g~L~V~v~~A~~L~~~d-~~g~~dpyv~v~l~~~~~-~~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~V~d~~ 338 (507)
..+.|+|.+.++.--+... .....||||.+.+..... ...+| ..+++|..|+|||+|.-.+.+ .+.|.+.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 3467888887765433221 123589999999975422 23567 777889999999999988864 578999999654
Q ss_pred CCCCCCeeEEEEEECcccC-----CCCceEEEEeccccccCCCCCCCccceEEEEEEEEEe
Q 010550 339 KVGGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (507)
Q Consensus 339 ~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~i~l~l~~~p 394 (507)
. +|+..|.+++.+|. .+...+.|++| ++.|+|++.+.|+-
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLEL------------KPQGRMLMNARYFL 130 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------BSSCEEEEEEEECC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEEE
Confidence 3 89999999999998 44566889886 46899999999973
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.88 E-value=4.9e-09 Score=114.72 Aligned_cols=78 Identities=26% Similarity=0.363 Sum_probs=67.1
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcC-------eEEEeeeecC-CCCCcccce-EEEE-ecCCCCCceEEEEEEE
Q 010550 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG-------DKKRTKMIRK-TRDPAWNEE-FQFM-LDEPPLHEKIHIEVMS 496 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dPyv~v~~~~-------~~~kT~v~~~-t~nP~wnE~-f~f~-v~~~~~~~~L~v~V~d 496 (507)
..+.|.|+|.+|++|+.+ .+||||+|.+.+ +++||+++++ +.||+|||+ |.|. +..+++ ..|.++|||
T Consensus 648 ~~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel-a~Lrf~V~D 725 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK-QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL-AVVRIIVSE 725 (816)
T ss_dssp CCEEEEEEEEEEECCCSS-CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG-CEEEEEEEE
T ss_pred cceEEEEEEEEcccCCCC-CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc-cEEEEEEEe
Confidence 357899999999999874 799999999975 4679999987 599999998 9998 776633 589999999
Q ss_pred CCCCeeeeEe
Q 010550 497 KRTGVIGACG 506 (507)
Q Consensus 497 ~~~~~iG~~~ 506 (507)
+++++||++.
T Consensus 726 ~dddfiG~~~ 735 (816)
T 3qr0_A 726 ENGKFIGHRV 735 (816)
T ss_dssp TTSCEEEEEE
T ss_pred cCCCeeeEEE
Confidence 9999999874
No 93
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.87 E-value=6e-09 Score=113.71 Aligned_cols=78 Identities=27% Similarity=0.546 Sum_probs=67.6
Q ss_pred eEEEEEEeeeecCCCC---CCCCcEEEEEE-----cCeEEEeeeecCCCCCcccceEEEEecCCCCCceEEEEEEEC---
Q 010550 429 GLLSVLVQGAEDVEGE---NHNNPYAIILY-----KGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK--- 497 (507)
Q Consensus 429 g~L~V~v~~a~~L~~~---~~~dPyv~v~~-----~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~--- 497 (507)
+.|.|+|.+|+||... +.+||||++++ ...+++|+++++|+||+|||.|.|.+........|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 4699999999999763 57999999999 345679999999999999999999998765556899999998
Q ss_pred -CCCeeeeEe
Q 010550 498 -RTGVIGACG 506 (507)
Q Consensus 498 -~~~~iG~~~ 506 (507)
.|++||++.
T Consensus 252 ~~dd~iG~~~ 261 (674)
T 3pfq_A 252 SRNDFMGSLS 261 (674)
T ss_dssp SCCEECCBCC
T ss_pred cccccccccc
Confidence 788999874
No 94
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.80 E-value=4e-10 Score=117.75 Aligned_cols=76 Identities=14% Similarity=0.269 Sum_probs=9.4
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcCe-EEEeeeecCC---CCCcccceEEEEecCCCCCceEEEEEEEC-----
Q 010550 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGD-KKRTKMIRKT---RDPAWNEEFQFMLDEPPLHEKIHIEVMSK----- 497 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dPyv~v~~~~~-~~kT~v~~~t---~nP~wnE~f~f~v~~~~~~~~L~v~V~d~----- 497 (507)
..+.|.|+|++|+||+.++ ||||+++++++ ..||+++++| +||+|||.|+|.+... .+.|.|+|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~d--dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK--RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDKKR 84 (483)
T ss_dssp EEECC-----------------------------------------------CCEECC----------------------
T ss_pred eccEEEEEEEEcCCcCCCC--CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCccc
Confidence 4578999999999999865 99999999886 4599999999 9999999999987543 47899999993
Q ss_pred ---CCCeeeeEe
Q 010550 498 ---RTGVIGACG 506 (507)
Q Consensus 498 ---~~~~iG~~~ 506 (507)
+|++||++.
T Consensus 85 ~~~~d~~lG~v~ 96 (483)
T 3bxj_A 85 KKDKAGYVGLVT 96 (483)
T ss_dssp ------------
T ss_pred cCCCCceEEEEE
Confidence 578999874
No 95
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.79 E-value=7.1e-09 Score=114.08 Aligned_cols=77 Identities=22% Similarity=0.317 Sum_probs=65.4
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eEEEeeeecC-CCCCcccc-eEEEE-ecCCCCCceEEEEEEECC
Q 010550 428 AGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTKMIRK-TRDPAWNE-EFQFM-LDEPPLHEKIHIEVMSKR 498 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dPyv~v~~~~------~~~kT~v~~~-t~nP~wnE-~f~f~-v~~~~~~~~L~v~V~d~~ 498 (507)
...|.|+|++|++|+.+ .+||||+|.+.+ .++||+++++ +.||+||| .|.|. +..++ ...|.++|||++
T Consensus 724 ~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe-la~Lrf~V~D~d 801 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT-LASLRIAAFEEG 801 (885)
T ss_dssp CEEEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG-GCEEEEEEEETT
T ss_pred ceEEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCC-cCEEEEEEEcCC
Confidence 45799999999999974 799999999975 2469999987 59999999 69998 76653 358999999999
Q ss_pred CCeeeeEe
Q 010550 499 TGVIGACG 506 (507)
Q Consensus 499 ~~~iG~~~ 506 (507)
+++||++.
T Consensus 802 ddfiG~~~ 809 (885)
T 3ohm_B 802 GKFVGHRI 809 (885)
T ss_dssp TEEEEEEE
T ss_pred ccEEeeEE
Confidence 99999874
No 96
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.77 E-value=1.2e-08 Score=112.07 Aligned_cols=78 Identities=24% Similarity=0.349 Sum_probs=65.9
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eEEEee-eecC-CCCCcccc-eEEE-EecCCCCCceEEEEEEE
Q 010550 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTK-MIRK-TRDPAWNE-EFQF-MLDEPPLHEKIHIEVMS 496 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dPyv~v~~~~------~~~kT~-v~~~-t~nP~wnE-~f~f-~v~~~~~~~~L~v~V~d 496 (507)
..+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| .|.| .+..+++ ..|.++|+|
T Consensus 676 ~~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el-~~Lr~~V~D 753 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL-ASLRVAVME 753 (799)
T ss_dssp TCEEEEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG-CEEEEEEEE
T ss_pred eeeeEEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCc-cEEEEEEEE
Confidence 46789999999999996 4799999999954 256999 8875 69999999 6999 8876633 489999999
Q ss_pred CCCCeeeeEe
Q 010550 497 KRTGVIGACG 506 (507)
Q Consensus 497 ~~~~~iG~~~ 506 (507)
+++++||++.
T Consensus 754 ~d~d~iG~~~ 763 (799)
T 2zkm_X 754 EGNKFLGHRI 763 (799)
T ss_dssp TTTEEEEEEE
T ss_pred eCCCccceEe
Confidence 9999999874
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.94 E-value=7.5e-05 Score=61.39 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=59.1
Q ss_pred CceEEEEEEeeeec--CCC-CCCCCcEEEEEEcCeE----EEe-eeecCCCCCcccceEEEEecCCCCCceEEEEEEECC
Q 010550 427 GAGLLSVLVQGAED--VEG-ENHNNPYAIILYKGDK----KRT-KMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKR 498 (507)
Q Consensus 427 ~~g~L~V~v~~a~~--L~~-~~~~dPyv~v~~~~~~----~kT-~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~~ 498 (507)
.+..|++.+.++.. |+. ....||||.+.+.... .+| ..+++|..|.|||.|.-.+.+. ..|+|.|+++.
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~a 80 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG---RVIQIVLMRAA 80 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT---CEEEEEEEEET
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC---EEEEEEEEcCC
Confidence 45678998877753 322 1369999999986543 254 7788899999999999999875 78999999876
Q ss_pred CCeeeeEe
Q 010550 499 TGVIGACG 506 (507)
Q Consensus 499 ~~~iG~~~ 506 (507)
-+++..|+
T Consensus 81 ~~fvAn~t 88 (126)
T 1yrk_A 81 EEPVSEVT 88 (126)
T ss_dssp TEEEEEEE
T ss_pred CCeeeEEE
Confidence 68887774
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.88 E-value=6.7e-05 Score=62.52 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=60.6
Q ss_pred CceEEEEEEeeeecCCC----CCCCCcEEEEEEcCeE----EEe-eeecCCCCCcccceEEEEecCCCCCceEEEEEEEC
Q 010550 427 GAGLLSVLVQGAEDVEG----ENHNNPYAIILYKGDK----KRT-KMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK 497 (507)
Q Consensus 427 ~~g~L~V~v~~a~~L~~----~~~~dPyv~v~~~~~~----~kT-~v~~~t~nP~wnE~f~f~v~~~~~~~~L~v~V~d~ 497 (507)
..+.|+|.+.++.--+. ....||||.|.+.... -+| ..+++|..|.|||.|.-.+.+. ..|+|.|+++
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~ 84 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG---RVMQIIVKGK 84 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS---CEEEEEEECS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC---eEEEEEEEcC
Confidence 45679999988765332 2469999999986542 377 7778899999999999998775 7899999987
Q ss_pred CCCeeeeEe
Q 010550 498 RTGVIGACG 506 (507)
Q Consensus 498 ~~~~iG~~~ 506 (507)
.-+++..|+
T Consensus 85 a~~fVAn~t 93 (138)
T 2enj_A 85 NVDLISETT 93 (138)
T ss_dssp SCSCCEEEE
T ss_pred CCCeeeEEE
Confidence 668888774
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.71 E-value=1.8 Score=39.17 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=41.5
Q ss_pred CceeeeecCCCCCCeEeeEEEEEeecC--CCCeEEEEEEEcCCC----CCCCeeEEEEEECcc
Q 010550 299 PWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFDWDKV----GGHDRLGMQLVPLKL 355 (507)
Q Consensus 299 ~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~V~d~~~~----~~d~~lG~~~i~l~~ 355 (507)
..++|.|...+.+|.|+|++.+.+... ....|.|++++...- ..+..+|.+.+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346888989999999999999988632 356799999876532 122367888777643
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=90.80 E-value=3.1 Score=35.49 Aligned_cols=128 Identities=12% Similarity=0.116 Sum_probs=83.4
Q ss_pred cCceEEEEEEEEEeccccccC-cCCCCCcEEEEEEcCccCCceeeeecCCCCCCeEeeEEEEEeecC-------CCCeEE
Q 010550 260 KKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP-------ESQILQ 331 (507)
Q Consensus 260 ~~~~g~L~V~v~~A~~L~~~d-~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~-------~~~~L~ 331 (507)
..-.+.+.|+|.++.--+..- ..+..+|+.-+.++=-.+....|.+.. +.+|.+|-+-.+.+... .+..+.
T Consensus 14 ~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 14 ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp CSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred cCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 345689999999987322110 123457776666654444456677765 78999998888887521 145788
Q ss_pred EEEEEcCCCCCCCeeEEEEEECcccCCCCce-EEEEeccccccCCCCCCC-ccceEEEEEEEEEec
Q 010550 332 LQVFDWDKVGGHDRLGMQLVPLKLLTPHETK-EFTLDLLKHTNISDPKDM-KQRGKIVVELTYVPF 395 (507)
Q Consensus 332 v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~-~~~~~l~~~~~~~~~~~~-~~~G~i~l~l~~~p~ 395 (507)
++++.... +..+.+|.+.|+|.++...+.+ ....++... .+. ..-|.|.+.++....
T Consensus 93 lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~------~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGT------KGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBS------SSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcC------CCCcceEEEEEEEEEEecc
Confidence 99988742 3456899999999999865442 333344221 111 467999999987653
No 101
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=89.37 E-value=3.6 Score=46.17 Aligned_cols=93 Identities=23% Similarity=0.199 Sum_probs=61.8
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEE--cCccCCc-eeeeecCCCCCCeEeeEEEEEee---cCCCCeEEEEEEE
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPW-KKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~~-~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~V~d 336 (507)
...++|+|.++.++.... ....+-||.+.+ |++.... .+|+. ....+|.|||...|.+. -|....|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999998886432 234677888877 3333322 23433 34567889999998876 3457899999998
Q ss_pred cCCC----CCCCeeEEEEEECcccC
Q 010550 337 WDKV----GGHDRLGMQLVPLKLLT 357 (507)
Q Consensus 337 ~~~~----~~d~~lG~~~i~l~~l~ 357 (507)
.... ..+..||.+.++|-+-.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6542 12347899999887654
No 102
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=89.24 E-value=1.9 Score=47.88 Aligned_cols=92 Identities=11% Similarity=0.105 Sum_probs=60.9
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEE--cCccCC-ceeeeecCCCCCCeEeeEEEEEee---cCCCCeEEEEEEE
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLP-WKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~V~d 336 (507)
...+.|+|.++.++... ..++-||.+.+ |+.... ...|+.+....+|.|||...|.+. -|....|.++||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 45789999999998654 34677887765 443331 234544455778999999998876 2457899999999
Q ss_pred cCCC--C----------CCCeeEEEEEECcccC
Q 010550 337 WDKV--G----------GHDRLGMQLVPLKLLT 357 (507)
Q Consensus 337 ~~~~--~----------~d~~lG~~~i~l~~l~ 357 (507)
.... + .+..+|.+.+++-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 6431 1 1347888888876543
No 103
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=83.41 E-value=4 Score=45.42 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=57.1
Q ss_pred EEEEEEEEEeccccccCcCCCCCcEEEEEE--cCccCCceeeeecCCCCCCeEeeEEEEEee---cCCCCeEEEEEEEcC
Q 010550 264 GILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPWKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFDWD 338 (507)
Q Consensus 264 g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~V~d~~ 338 (507)
..++|+|.++......+ +..++-||.+.+ |+......+|+.+.-+.+|.|||...|.+. -|....|.+++|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 46788888876422111 234577887654 443332234544445667999999888775 245789999999854
Q ss_pred CCC----------------CCCeeEEEEEECcccC
Q 010550 339 KVG----------------GHDRLGMQLVPLKLLT 357 (507)
Q Consensus 339 ~~~----------------~d~~lG~~~i~l~~l~ 357 (507)
..+ +...+|.+.++|-+-.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 221 2346788777776544
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=82.93 E-value=2.5 Score=46.93 Aligned_cols=70 Identities=9% Similarity=0.227 Sum_probs=51.7
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEE--cCeE----EEeeeecCCCCCcccceEEEEec--CCCCCceEEEEEEEC
Q 010550 428 AGLLSVLVQGAEDVEGENHNNPYAIILY--KGDK----KRTKMIRKTRDPAWNEEFQFMLD--EPPLHEKIHIEVMSK 497 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dPyv~v~~--~~~~----~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~~L~v~V~d~ 497 (507)
...+.|+|.++.+++..+..+-||++.+ |++. ..|+.+....+|.|||-++|.+. +-|.+..|.++||+-
T Consensus 216 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp CSEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CCceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 3569999999999987656778888665 4442 36666666889999998888754 556677999999984
No 105
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=72.74 E-value=4.4 Score=45.67 Aligned_cols=73 Identities=19% Similarity=0.210 Sum_probs=50.6
Q ss_pred eEEEEEEEEEeccccccCcCCCCCcEEEEEE--cCccCC-ceeeeecCCCCCCeEeeEEEEEee---cCCCCeEEEEEEE
Q 010550 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLP-WKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (507)
Q Consensus 263 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~V~d 336 (507)
...++|+|.++.++... ..++-||.+.+ |+.... ...|+.+..+.+|.|||...|.+. -|....|.+++|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46789999999988654 34577776544 544331 234555555778999999888875 2447899999998
Q ss_pred cC
Q 010550 337 WD 338 (507)
Q Consensus 337 ~~ 338 (507)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 106
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=71.20 E-value=3.7 Score=46.31 Aligned_cols=70 Identities=13% Similarity=0.202 Sum_probs=52.9
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEE--EcCeE----EEeeeecCCCCCcccceEEEEec--CCCCCceEEEEEEEC
Q 010550 428 AGLLSVLVQGAEDVEGENHNNPYAIIL--YKGDK----KRTKMIRKTRDPAWNEEFQFMLD--EPPLHEKIHIEVMSK 497 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dPyv~v~--~~~~~----~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~~L~v~V~d~ 497 (507)
...+.|+|.++.++......+-||.+. .|++. .+|+.+....+|.|||-++|.+. +-|.+..|.++||+.
T Consensus 352 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CSEEEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCCEEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 457999999999998766677787744 45543 35666666889999998888754 555677999999874
No 107
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=61.68 E-value=2.6 Score=27.55 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=7.7
Q ss_pred HHHHhhheeeccCCc
Q 010550 23 LVGFFLFIYSKPNDD 37 (507)
Q Consensus 23 ~~~~~~~~~~~~~~~ 37 (507)
+++...|.|+|++++
T Consensus 25 ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhhhhhh
Confidence 344445556665443
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=59.98 E-value=18 Score=40.34 Aligned_cols=70 Identities=13% Similarity=0.198 Sum_probs=48.1
Q ss_pred ceEEEEEEeeeec--CCCCCCCCcEEEEEE--cCeE---EEeeeecCCCCCcccceEEEEe--cCCCCCceEEEEEEEC
Q 010550 428 AGLLSVLVQGAED--VEGENHNNPYAIILY--KGDK---KRTKMIRKTRDPAWNEEFQFML--DEPPLHEKIHIEVMSK 497 (507)
Q Consensus 428 ~g~L~V~v~~a~~--L~~~~~~dPyv~v~~--~~~~---~kT~v~~~t~nP~wnE~f~f~v--~~~~~~~~L~v~V~d~ 497 (507)
...++|.|.++.. ++.+..++-||++.+ |++. .+|+.+.-+.+|.|||-++|.+ .+-|.+..|.++||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 3468888888864 233334567877654 5543 2565555677899999888865 4556677999999974
No 109
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=51.01 E-value=18 Score=32.70 Aligned_cols=39 Identities=8% Similarity=0.313 Sum_probs=31.4
Q ss_pred EEEeeeecCCCCCcccceEEEEecCCCCC-ceEEEEEEEC
Q 010550 459 KKRTKMIRKTRDPAWNEEFQFMLDEPPLH-EKIHIEVMSK 497 (507)
Q Consensus 459 ~~kT~v~~~t~nP~wnE~f~f~v~~~~~~-~~L~v~V~d~ 497 (507)
..+|.|..++.+|.|+|++...++..... .-|.++++..
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~ 117 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHR 117 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEEC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEe
Confidence 46899999999999999999999876332 3788888654
No 110
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=47.53 E-value=27 Score=39.30 Aligned_cols=69 Identities=17% Similarity=0.313 Sum_probs=49.8
Q ss_pred ceEEEEEEeeeecCCCC--CCCCcEEEEEE--cCe----EEEeeeecCCCCCcccceEEEEe--cCCCCCceEEEEEEEC
Q 010550 428 AGLLSVLVQGAEDVEGE--NHNNPYAIILY--KGD----KKRTKMIRKTRDPAWNEEFQFML--DEPPLHEKIHIEVMSK 497 (507)
Q Consensus 428 ~g~L~V~v~~a~~L~~~--~~~dPyv~v~~--~~~----~~kT~v~~~t~nP~wnE~f~f~v--~~~~~~~~L~v~V~d~ 497 (507)
...++|+|.++.+++.. ...+-||++.+ |++ ..+|+.+. ..+|.|||-++|.+ .+-|.+..|.+.||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 45799999999888642 35677888877 333 23555444 46788999888876 4556677999999975
No 111
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.13 E-value=4.9 Score=26.31 Aligned_cols=14 Identities=7% Similarity=0.218 Sum_probs=6.9
Q ss_pred HHHHhhheeeccCC
Q 010550 23 LVGFFLFIYSKPND 36 (507)
Q Consensus 23 ~~~~~~~~~~~~~~ 36 (507)
+++...|.|+|+++
T Consensus 26 ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 26 VVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhH
Confidence 33444555666544
No 112
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=44.88 E-value=3.5 Score=26.95 Aligned_cols=23 Identities=22% Similarity=0.381 Sum_probs=11.7
Q ss_pred cccchhHHHHHHHhhheeeccCC
Q 010550 14 GFIGLPLGLLVGFFLFIYSKPND 36 (507)
Q Consensus 14 ~~~g~~~~~~~~~~~~~~~~~~~ 36 (507)
+.+|+++.+++++....|+||++
T Consensus 17 ~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 17 AVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhheehhh
Confidence 33554444445555555666543
No 113
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=23.12 E-value=1.5e+02 Score=24.94 Aligned_cols=79 Identities=20% Similarity=0.393 Sum_probs=51.3
Q ss_pred CCceEEEEEEeeeecCCC-----CCCCCcEEEEEE--cC-eEEEeeeecCCCCCcccceEEEEecCCCC------CceEE
Q 010550 426 SGAGLLSVLVQGAEDVEG-----ENHNNPYAIILY--KG-DKKRTKMIRKTRDPAWNEEFQFMLDEPPL------HEKIH 491 (507)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~-----~~~~dPyv~v~~--~~-~~~kT~v~~~t~nP~wnE~f~f~v~~~~~------~~~L~ 491 (507)
..-.++.+.|.++. +.. .+..+|+.-+++ -+ +.+-|.++. ..+|.+|-+-.|.+..... ...+.
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 35678999998886 321 134567655555 34 455666665 7899999999999954321 12788
Q ss_pred EEEEEC---CCCeeeeEe
Q 010550 492 IEVMSK---RTGVIGACG 506 (507)
Q Consensus 492 v~V~d~---~~~~iG~~~ 506 (507)
+++... ..+.||.++
T Consensus 93 lELhqa~g~~~~tla~~~ 110 (156)
T 2yrb_A 93 LEVHQAYSTEYETIAACQ 110 (156)
T ss_dssp EEEEEECSSCEEEEEEEE
T ss_pred EEEEEeeCCCceEEEEEE
Confidence 888776 334666653
No 114
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=21.80 E-value=12 Score=23.01 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=12.4
Q ss_pred cccchhHHHHHHHhhheeeccC
Q 010550 14 GFIGLPLGLLVGFFLFIYSKPN 35 (507)
Q Consensus 14 ~~~g~~~~~~~~~~~~~~~~~~ 35 (507)
|.+|+++.++++.....|+||+
T Consensus 13 gVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 13 TVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHHHhheEEeec
Confidence 3445444455566666677653
Done!