Query 010551
Match_columns 507
No_of_seqs 301 out of 2707
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:14:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010551.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010551hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 7.8E-45 2.7E-49 352.5 30.5 289 22-346 9-301 (308)
2 3ii7_A Kelch-like protein 7; p 100.0 1E-43 3.4E-48 344.4 35.3 265 3-301 24-291 (306)
3 2xn4_A Kelch-like protein 2; s 100.0 1.8E-43 6.1E-48 342.0 36.6 253 3-285 30-283 (302)
4 1zgk_A Kelch-like ECH-associat 100.0 1.5E-43 5.1E-48 343.5 33.7 255 3-288 39-297 (308)
5 2vpj_A Kelch-like protein 12; 100.0 9E-43 3.1E-47 336.9 34.8 255 3-288 31-288 (301)
6 4asc_A Kelch repeat and BTB do 100.0 1.2E-43 4E-48 345.4 27.3 276 3-316 13-305 (315)
7 3ii7_A Kelch-like protein 7; p 100.0 1.5E-42 5.2E-47 336.1 33.8 270 37-345 11-285 (306)
8 2xn4_A Kelch-like protein 2; s 100.0 6.1E-42 2.1E-46 331.2 33.7 277 32-345 10-290 (302)
9 2woz_A Kelch repeat and BTB do 100.0 1.8E-42 6E-47 337.6 29.5 274 4-315 25-314 (318)
10 2vpj_A Kelch-like protein 12; 100.0 4.7E-42 1.6E-46 331.9 32.2 282 23-345 5-291 (301)
11 4asc_A Kelch repeat and BTB do 100.0 7.2E-41 2.5E-45 325.7 27.0 262 37-338 4-283 (315)
12 2uvk_A YJHT; unknown function, 100.0 2.1E-40 7.1E-45 328.3 30.0 282 23-339 5-349 (357)
13 2woz_A Kelch repeat and BTB do 100.0 6.3E-40 2.2E-44 319.5 30.0 271 25-338 6-293 (318)
14 2uvk_A YJHT; unknown function, 100.0 6E-39 2.1E-43 317.8 27.3 260 3-288 31-352 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.3E-38 4.4E-43 340.4 29.0 284 23-332 384-694 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.7E-35 5.8E-40 316.3 26.0 254 3-278 412-694 (695)
17 1k3i_A Galactose oxidase precu 100.0 4.6E-33 1.6E-37 297.3 21.4 323 4-362 167-530 (656)
18 1k3i_A Galactose oxidase precu 100.0 2.5E-32 8.6E-37 291.5 20.4 297 4-331 220-548 (656)
19 3dsm_A Uncharacterized protein 98.7 3.1E-05 1E-09 74.5 30.0 273 2-331 16-301 (328)
20 3mbr_X Glutamine cyclotransfer 98.4 0.00018 6.1E-09 65.2 23.9 206 90-330 20-233 (243)
21 3dsm_A Uncharacterized protein 98.3 0.0029 1E-07 60.5 32.2 234 52-336 16-257 (328)
22 3mbr_X Glutamine cyclotransfer 98.2 0.00046 1.6E-08 62.4 22.8 163 28-233 21-184 (243)
23 3nol_A Glutamine cyclotransfer 98.1 0.0008 2.8E-08 61.4 21.5 203 93-330 45-254 (262)
24 2ovr_B FBW7, F-BOX/WD repeat p 98.0 0.0092 3.2E-07 59.4 30.4 199 96-333 244-443 (445)
25 3nol_A Glutamine cyclotransfer 98.0 0.0011 3.7E-08 60.6 20.2 159 31-233 46-206 (262)
26 3bws_A Protein LP49; two-domai 98.0 0.00098 3.4E-08 66.1 22.1 270 4-333 102-391 (433)
27 2iwa_A Glutamine cyclotransfer 97.9 0.0077 2.6E-07 55.4 24.9 206 94-333 24-238 (266)
28 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.021 7.2E-07 55.4 32.7 213 2-283 112-344 (376)
29 3nok_A Glutaminyl cyclase; bet 97.9 0.0015 5.1E-08 59.7 19.2 156 31-233 58-215 (268)
30 2iwa_A Glutamine cyclotransfer 97.9 0.0055 1.9E-07 56.4 23.0 202 30-278 23-237 (266)
31 3vgz_A Uncharacterized protein 97.8 0.02 6.9E-07 54.5 27.4 229 4-283 70-308 (353)
32 1l0q_A Surface layer protein; 97.7 0.0056 1.9E-07 59.6 22.0 257 2-333 11-276 (391)
33 2z3z_A Dipeptidyl aminopeptida 97.6 0.029 9.9E-07 59.5 27.9 196 116-333 234-436 (706)
34 3v9f_A Two-component system se 97.6 0.0076 2.6E-07 65.1 23.0 268 2-331 382-655 (781)
35 4ery_A WD repeat-containing pr 97.6 0.051 1.7E-06 50.9 26.8 190 37-280 76-270 (312)
36 3bws_A Protein LP49; two-domai 97.6 0.02 6.7E-07 56.6 24.1 268 3-331 144-431 (433)
37 3nok_A Glutaminyl cyclase; bet 97.6 0.0045 1.6E-07 56.5 17.4 199 93-329 57-263 (268)
38 4a2l_A BT_4663, two-component 97.5 0.018 6.1E-07 62.3 25.2 268 3-331 377-658 (795)
39 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.082 2.8E-06 51.1 31.9 221 3-283 63-303 (376)
40 4aez_A CDC20, WD repeat-contai 97.5 0.055 1.9E-06 52.9 25.7 264 2-334 112-382 (401)
41 2ojh_A Uncharacterized protein 97.4 0.0046 1.6E-07 57.1 16.7 233 2-286 21-266 (297)
42 1l0q_A Surface layer protein; 97.4 0.012 4.2E-07 57.2 20.1 224 38-333 2-234 (391)
43 3u4y_A Uncharacterized protein 97.4 0.012 4.3E-07 55.6 19.3 268 3-333 20-305 (331)
44 3v9f_A Two-component system se 97.4 0.0089 3.1E-07 64.5 20.1 224 3-278 427-656 (781)
45 1ri6_A Putative isomerase YBHE 97.4 0.04 1.4E-06 52.0 22.7 276 3-336 15-314 (343)
46 1k8k_C P40, ARP2/3 complex 41 97.3 0.065 2.2E-06 51.2 24.1 231 2-287 29-285 (372)
47 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.07 2.4E-06 52.6 24.5 239 37-333 143-388 (415)
48 1p22_A F-BOX/WD-repeat protein 97.3 0.071 2.4E-06 52.7 24.4 214 2-278 152-365 (435)
49 1gxr_A ESG1, transducin-like e 97.3 0.068 2.3E-06 50.2 22.8 188 37-282 108-300 (337)
50 1p22_A F-BOX/WD-repeat protein 97.2 0.092 3.1E-06 51.9 24.5 189 34-280 139-327 (435)
51 1yiq_A Quinohemoprotein alcoho 97.2 0.26 8.8E-06 52.2 28.9 129 31-184 64-201 (689)
52 2hqs_A Protein TOLB; TOLB, PAL 97.2 0.016 5.5E-07 57.3 18.4 231 3-287 159-396 (415)
53 1pby_B Quinohemoprotein amine 97.2 0.068 2.3E-06 50.2 21.7 270 2-333 10-311 (337)
54 1nir_A Nitrite reductase; hemo 97.1 0.076 2.6E-06 54.5 22.9 273 4-334 160-460 (543)
55 4a2l_A BT_4663, two-component 97.1 0.2 6.9E-06 54.0 27.1 236 3-284 282-531 (795)
56 3hfq_A Uncharacterized protein 97.1 0.077 2.6E-06 50.5 21.3 277 5-333 20-320 (347)
57 3vgz_A Uncharacterized protein 97.1 0.21 7.2E-06 47.2 29.2 239 37-333 52-304 (353)
58 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.31 1.1E-05 48.1 29.8 226 37-334 168-393 (445)
59 1kb0_A Quinohemoprotein alcoho 97.0 0.16 5.5E-06 53.6 24.2 129 31-184 71-208 (677)
60 4ery_A WD repeat-containing pr 97.0 0.24 8.1E-06 46.2 23.3 230 37-333 34-269 (312)
61 3c5m_A Oligogalacturonate lyas 96.9 0.31 1E-05 46.9 24.2 205 116-336 167-388 (396)
62 3jrp_A Fusion protein of prote 96.9 0.11 3.8E-06 49.6 20.8 191 37-279 22-241 (379)
63 3pe7_A Oligogalacturonate lyas 96.9 0.064 2.2E-06 51.9 19.2 210 116-335 167-387 (388)
64 4aez_A CDC20, WD repeat-contai 96.9 0.36 1.2E-05 46.9 25.9 220 53-332 113-336 (401)
65 2v71_A Nuclear distribution pr 96.9 0.024 8.1E-07 48.2 13.3 60 430-489 94-157 (189)
66 1jmx_B Amine dehydrogenase; ox 96.9 0.11 3.8E-06 49.1 20.1 160 37-233 10-180 (349)
67 2ecf_A Dipeptidyl peptidase IV 96.8 0.088 3E-06 56.1 21.3 147 169-330 264-413 (741)
68 1gxr_A ESG1, transducin-like e 96.8 0.31 1.1E-05 45.4 23.4 187 100-333 108-297 (337)
69 3jrp_A Fusion protein of prote 96.8 0.077 2.6E-06 50.8 18.9 233 2-287 32-297 (379)
70 2ojh_A Uncharacterized protein 96.8 0.12 4.2E-06 47.1 19.5 229 52-334 21-260 (297)
71 4gga_A P55CDC, cell division c 96.8 0.096 3.3E-06 51.5 19.5 260 2-331 124-394 (420)
72 1k8k_C P40, ARP2/3 complex 41 96.7 0.22 7.6E-06 47.4 21.5 150 37-227 19-172 (372)
73 3scy_A Hypothetical bacterial 96.7 0.43 1.5E-05 45.5 27.6 114 203-333 222-340 (361)
74 2xdw_A Prolyl endopeptidase; a 96.7 0.23 7.7E-06 52.7 23.2 253 37-334 135-416 (710)
75 3v7d_B Cell division control p 96.7 0.55 1.9E-05 46.5 27.3 146 150-334 278-423 (464)
76 2ad6_A Methanol dehydrogenase 96.7 0.37 1.3E-05 49.6 23.9 128 31-184 56-194 (571)
77 2z2n_A Virginiamycin B lyase; 96.7 0.38 1.3E-05 44.1 27.3 256 4-333 37-296 (299)
78 1kv9_A Type II quinohemoprotei 96.7 0.43 1.5E-05 50.2 24.5 132 30-184 59-196 (668)
79 3hfq_A Uncharacterized protein 96.7 0.18 6.1E-06 47.9 20.0 148 54-233 19-177 (347)
80 3u4y_A Uncharacterized protein 96.5 0.34 1.2E-05 45.4 21.0 236 37-335 9-255 (331)
81 1qks_A Cytochrome CD1 nitrite 96.5 0.24 8.3E-06 50.9 20.8 274 3-333 177-478 (567)
82 1r5m_A SIR4-interacting protei 96.5 0.38 1.3E-05 46.5 21.7 145 101-280 217-363 (425)
83 1got_B GT-beta; complex (GTP-b 96.4 0.65 2.2E-05 43.9 24.1 135 118-280 165-303 (340)
84 1flg_A Protein (quinoprotein e 96.4 1 3.5E-05 46.5 24.9 123 31-183 62-201 (582)
85 2v66_B Nuclear distribution pr 96.4 0.1 3.5E-06 40.0 12.7 71 423-493 34-108 (111)
86 1pjx_A Dfpase, DIISOPROPYLFLUO 96.4 0.11 3.8E-06 48.4 16.1 231 3-279 46-300 (314)
87 3oja_B Anopheles plasmodium-re 96.2 0.022 7.4E-07 59.4 11.3 9 119-127 125-133 (597)
88 3v7d_B Cell division control p 96.2 1.1 3.7E-05 44.3 29.4 183 100-330 279-463 (464)
89 1kb0_A Quinohemoprotein alcoho 96.2 0.87 3E-05 47.9 23.2 203 3-230 87-348 (677)
90 1got_B GT-beta; complex (GTP-b 96.1 0.85 2.9E-05 43.1 21.3 229 37-332 66-301 (340)
91 2bkl_A Prolyl endopeptidase; m 96.1 0.42 1.4E-05 50.5 20.7 245 5-284 96-357 (695)
92 3azo_A Aminopeptidase; POP fam 96.1 0.41 1.4E-05 50.1 20.4 150 116-285 216-376 (662)
93 1sq9_A Antiviral protein SKI8; 96.1 0.78 2.7E-05 44.0 21.2 116 151-280 197-324 (397)
94 2pbi_B Guanine nucleotide-bind 96.1 1 3.6E-05 42.8 23.1 135 118-280 177-317 (354)
95 2z2n_A Virginiamycin B lyase; 96.0 0.87 3E-05 41.6 21.6 214 4-279 79-296 (299)
96 3e5z_A Putative gluconolactona 96.0 0.91 3.1E-05 41.8 23.6 235 37-335 39-289 (296)
97 1pby_B Quinohemoprotein amine 96.0 0.65 2.2E-05 43.3 19.8 114 100-233 45-168 (337)
98 3jro_A Fusion protein of prote 96.0 0.063 2.2E-06 57.5 13.9 231 3-286 31-294 (753)
99 3dwl_C Actin-related protein 2 96.0 0.2 6.9E-06 48.0 16.3 151 37-229 22-178 (377)
100 4gga_A P55CDC, cell division c 96.0 1.3 4.4E-05 43.2 24.7 225 53-333 125-354 (420)
101 3oja_B Anopheles plasmodium-re 96.0 0.022 7.5E-07 59.4 9.8 6 328-333 350-355 (597)
102 3zwl_B Eukaryotic translation 96.0 1.1 3.7E-05 42.2 22.9 149 151-332 186-346 (369)
103 3jro_A Fusion protein of prote 96.0 0.24 8.3E-06 53.0 18.2 106 37-178 20-133 (753)
104 1ri6_A Putative isomerase YBHE 96.0 0.86 3E-05 42.5 20.4 164 100-288 140-320 (343)
105 3u1c_A Tropomyosin alpha-1 cha 96.0 0.13 4.5E-06 39.2 11.5 87 389-482 9-99 (101)
106 1w6s_A Methanol dehydrogenase 96.0 1.2 4E-05 46.1 22.6 128 31-184 56-200 (599)
107 3mkq_A Coatomer beta'-subunit; 96.0 0.55 1.9E-05 50.3 21.1 188 37-281 66-262 (814)
108 3ott_A Two-component system se 95.9 0.55 1.9E-05 50.2 20.8 186 3-234 392-592 (758)
109 2xdw_A Prolyl endopeptidase; a 95.9 0.5 1.7E-05 50.0 20.3 223 37-286 83-331 (710)
110 3dwl_C Actin-related protein 2 95.9 0.23 7.8E-06 47.6 16.3 139 2-178 32-178 (377)
111 1pjx_A Dfpase, DIISOPROPYLFLUO 95.9 1.1 3.6E-05 41.5 23.1 247 37-333 28-300 (314)
112 1sq9_A Antiviral protein SKI8; 95.9 0.81 2.8E-05 43.9 20.3 155 102-280 82-269 (397)
113 4ggc_A P55CDC, cell division c 95.9 1.1 3.6E-05 41.4 20.7 57 2-66 44-102 (318)
114 4gqb_B Methylosome protein 50; 95.9 0.79 2.7E-05 43.6 19.8 185 100-331 138-330 (344)
115 2ad6_A Methanol dehydrogenase 95.9 1.4 4.6E-05 45.4 22.6 110 3-133 73-194 (571)
116 3u1c_A Tropomyosin alpha-1 cha 95.9 0.1 3.5E-06 39.9 10.4 26 437-462 29-54 (101)
117 2qc5_A Streptogramin B lactona 95.8 1.1 3.7E-05 40.9 25.9 218 4-284 42-265 (300)
118 1vyh_C Platelet-activating fac 95.8 0.67 2.3E-05 45.2 19.4 65 100-181 203-269 (410)
119 3fm0_A Protein CIAO1; WDR39,SG 95.8 0.32 1.1E-05 46.2 16.4 139 37-213 72-215 (345)
120 2z3z_A Dipeptidyl aminopeptida 95.8 2.4 8.3E-05 44.5 25.8 194 53-280 235-437 (706)
121 3g4e_A Regucalcin; six bladed 95.7 0.78 2.7E-05 42.5 18.6 199 37-283 24-234 (297)
122 3pe7_A Oligogalacturonate lyas 95.7 0.78 2.7E-05 44.0 19.2 201 53-288 60-283 (388)
123 3ow8_A WD repeat-containing pr 95.7 1.4 4.8E-05 41.3 24.8 186 101-332 92-279 (321)
124 1i84_S Smooth muscle myosin he 95.7 0.027 9.1E-07 63.4 9.4 6 13-18 41-46 (1184)
125 3fm0_A Protein CIAO1; WDR39,SG 95.7 0.18 6.3E-06 48.0 14.3 185 100-319 27-216 (345)
126 2dfs_A Myosin-5A; myosin-V, in 95.7 0.073 2.5E-06 58.8 12.5 14 5-19 13-26 (1080)
127 4g56_B MGC81050 protein; prote 95.7 0.21 7.3E-06 47.9 14.8 185 100-331 150-342 (357)
128 4aow_A Guanine nucleotide-bind 95.7 1.1 3.8E-05 41.7 19.8 103 153-280 186-288 (340)
129 3ei3_B DNA damage-binding prot 95.7 1 3.5E-05 43.1 19.8 178 2-230 95-284 (383)
130 3i2n_A WD repeat-containing pr 95.6 0.15 5E-06 48.3 13.5 106 100-228 128-243 (357)
131 3scy_A Hypothetical bacterial 95.6 1.6 5.4E-05 41.4 22.8 111 40-177 15-129 (361)
132 3zwl_B Eukaryotic translation 95.6 1.2 4E-05 42.0 19.9 197 37-283 43-254 (369)
133 2dfs_A Myosin-5A; myosin-V, in 95.6 0.031 1.1E-06 61.7 9.3 17 466-482 1027-1043(1080)
134 2fxo_A Myosin heavy chain, car 95.6 0.41 1.4E-05 38.4 13.6 24 466-489 101-124 (129)
135 3mkq_A Coatomer beta'-subunit; 95.6 0.77 2.6E-05 49.1 20.4 189 37-280 24-219 (814)
136 2ecf_A Dipeptidyl peptidase IV 95.6 1.6 5.6E-05 46.1 22.8 155 117-284 263-421 (741)
137 3e5z_A Putative gluconolactona 95.6 0.94 3.2E-05 41.7 18.5 221 3-280 50-288 (296)
138 4a11_B DNA excision repair pro 95.5 1.8 6.1E-05 41.4 21.4 237 37-333 111-366 (408)
139 3ow8_A WD repeat-containing pr 95.5 1.6 5.5E-05 40.8 26.0 145 100-280 133-281 (321)
140 1jmx_B Amine dehydrogenase; ox 95.5 1.3 4.3E-05 41.5 19.5 58 2-67 20-79 (349)
141 1yiq_A Quinohemoprotein alcoho 95.5 3.1 0.00011 43.8 25.0 110 3-132 80-200 (689)
142 2v4h_A NF-kappa-B essential mo 95.4 0.17 5.7E-06 38.3 9.7 34 391-424 26-59 (110)
143 1r5m_A SIR4-interacting protei 95.4 2 7E-05 41.2 24.0 190 100-331 160-360 (425)
144 4e54_B DNA damage-binding prot 95.4 0.43 1.5E-05 47.0 16.2 150 37-230 176-329 (435)
145 2gop_A Trilobed protease; beta 95.4 1.8 6.3E-05 40.5 21.6 101 116-234 151-257 (347)
146 1vyh_C Platelet-activating fac 95.3 1.6 5.5E-05 42.5 20.1 147 37-232 119-269 (410)
147 3vl1_A 26S proteasome regulato 95.3 2.2 7.7E-05 41.1 23.5 106 100-232 108-216 (420)
148 4aow_A Guanine nucleotide-bind 95.3 1.3 4.3E-05 41.3 18.7 145 102-279 186-338 (340)
149 1yr2_A Prolyl oligopeptidase; 95.3 1.4 4.7E-05 46.9 20.7 252 37-334 173-443 (741)
150 3oja_A Leucine-rich immune mol 95.2 0.21 7.1E-06 50.4 13.5 34 394-427 365-398 (487)
151 2eqb_B RAB guanine nucleotide 95.2 0.25 8.6E-06 36.7 10.1 47 415-461 10-56 (97)
152 3u59_A Tropomyosin beta chain; 95.2 0.28 9.6E-06 37.4 10.9 17 466-482 83-99 (101)
153 2dg1_A DRP35, lactonase; beta 95.2 1 3.6E-05 42.1 17.8 195 3-233 66-268 (333)
154 2vdu_B TRNA (guanine-N(7)-)-me 95.2 2.3 8E-05 41.8 21.0 111 100-233 160-276 (450)
155 3odt_A Protein DOA1; ubiquitin 95.2 1.9 6.5E-05 39.5 22.7 148 151-337 154-301 (313)
156 2pm9_A Protein WEB1, protein t 95.1 2.5 8.6E-05 40.6 21.2 198 101-333 126-338 (416)
157 3hnw_A Uncharacterized protein 95.1 0.13 4.3E-06 41.7 8.9 65 412-486 70-134 (138)
158 3iuj_A Prolyl endopeptidase; h 95.0 2.6 8.9E-05 44.4 21.9 149 116-287 258-414 (693)
159 2aq5_A Coronin-1A; WD40 repeat 95.0 2.7 9.3E-05 40.5 21.2 201 100-333 93-300 (402)
160 3ei3_B DNA damage-binding prot 95.0 2.6 8.9E-05 40.2 20.3 186 102-333 87-283 (383)
161 3sfz_A APAF-1, apoptotic pepti 94.9 0.36 1.2E-05 54.7 15.9 178 3-231 983-1161(1249)
162 3fvz_A Peptidyl-glycine alpha- 94.9 2.5 8.4E-05 39.7 28.5 235 53-331 69-321 (329)
163 3iuj_A Prolyl endopeptidase; h 94.9 1.6 5.5E-05 46.0 19.9 250 37-335 139-408 (693)
164 4g56_B MGC81050 protein; prote 94.9 0.33 1.1E-05 46.5 13.4 106 151-280 150-260 (357)
165 3g4e_A Regucalcin; six bladed 94.9 0.58 2E-05 43.4 14.8 187 4-233 36-234 (297)
166 3u59_A Tropomyosin beta chain; 94.9 0.38 1.3E-05 36.7 10.8 11 391-401 11-21 (101)
167 1kv9_A Type II quinohemoprotei 94.9 4.5 0.00015 42.4 23.4 109 4-133 77-196 (668)
168 2dg1_A DRP35, lactonase; beta 94.8 2.6 8.8E-05 39.3 19.8 206 37-284 55-269 (333)
169 2hes_X YDR267CP; beta-propelle 94.8 2.6 9E-05 39.4 22.4 157 100-284 118-286 (330)
170 3c5m_A Oligogalacturonate lyas 94.8 0.62 2.1E-05 44.7 15.2 200 3-234 168-390 (396)
171 3vl1_A 26S proteasome regulato 94.8 3.1 0.00011 40.1 27.1 105 151-278 258-365 (420)
172 1qhu_A Protein (hemopexin); be 94.8 3.6 0.00012 40.7 22.7 188 100-331 158-384 (460)
173 2vdu_B TRNA (guanine-N(7)-)-me 94.8 2.8 9.6E-05 41.2 20.2 159 101-282 210-397 (450)
174 1rwi_B Serine/threonine-protei 94.7 1.7 5.8E-05 39.0 17.3 213 4-277 47-263 (270)
175 3ott_A Two-component system se 94.7 5.3 0.00018 42.4 25.5 198 37-284 383-592 (758)
176 2ynn_A Coatomer subunit beta'; 94.7 1.9 6.4E-05 39.9 17.7 229 37-333 24-260 (304)
177 3sfz_A APAF-1, apoptotic pepti 94.7 5.1 0.00017 45.2 24.5 190 37-280 668-873 (1249)
178 2fxo_A Myosin heavy chain, car 94.6 0.7 2.4E-05 37.0 12.4 90 397-486 21-114 (129)
179 3o0z_A RHO-associated protein 94.6 0.56 1.9E-05 38.8 11.7 33 412-444 50-82 (168)
180 3q8t_A Beclin-1; autophagy, AT 94.6 0.7 2.4E-05 34.7 11.3 41 405-445 13-53 (96)
181 1w6s_A Methanol dehydrogenase 94.6 3.7 0.00013 42.4 20.9 110 3-133 73-200 (599)
182 3dm0_A Maltose-binding peripla 94.5 4 0.00014 42.8 21.9 189 37-281 441-635 (694)
183 3iz6_a 40S ribosomal protein R 94.5 3.5 0.00012 39.4 27.0 142 118-281 181-332 (380)
184 3ju4_A Endo-N-acetylneuraminid 94.5 3.5 0.00012 39.3 21.0 203 5-227 260-513 (670)
185 4e54_B DNA damage-binding prot 94.5 0.78 2.7E-05 45.1 15.2 147 100-279 131-283 (435)
186 2bkl_A Prolyl endopeptidase; m 94.4 2.1 7.3E-05 45.0 19.4 242 3-285 147-404 (695)
187 3ju4_A Endo-N-acetylneuraminid 94.4 3.4 0.00012 39.4 17.7 128 78-212 271-406 (670)
188 3azo_A Aminopeptidase; POP fam 94.4 2.5 8.7E-05 43.9 19.8 156 117-287 102-283 (662)
189 2v4h_A NF-kappa-B essential mo 94.3 0.47 1.6E-05 35.9 9.6 35 411-445 25-59 (110)
190 3hnw_A Uncharacterized protein 94.3 0.21 7.1E-06 40.5 8.5 58 408-465 73-130 (138)
191 2aq5_A Coronin-1A; WD40 repeat 94.3 1.4 4.6E-05 42.7 16.4 156 102-285 145-308 (402)
192 1qks_A Cytochrome CD1 nitrite 94.3 3.9 0.00013 41.9 20.3 198 116-334 319-540 (567)
193 4gqb_B Methylosome protein 50; 94.2 1.7 5.9E-05 41.2 16.7 149 100-280 92-248 (344)
194 3ghg_A Fibrinogen alpha chain; 94.2 0.22 7.6E-06 48.5 9.8 37 428-464 114-150 (562)
195 1yr2_A Prolyl oligopeptidase; 94.2 2.1 7.3E-05 45.4 18.9 222 37-285 118-359 (741)
196 2ynn_A Coatomer subunit beta'; 94.1 3.5 0.00012 38.0 19.0 148 100-282 108-263 (304)
197 2fp8_A Strictosidine synthase; 94.1 1.7 5.7E-05 40.7 16.2 234 3-278 40-313 (322)
198 1nir_A Nitrite reductase; hemo 94.1 2.2 7.4E-05 43.6 17.9 161 116-284 345-520 (543)
199 1m1j_B Fibrinogen beta chain; 94.0 0.75 2.6E-05 45.1 13.3 20 466-485 172-191 (464)
200 3k26_A Polycomb protein EED; W 94.0 2 6.8E-05 40.3 16.6 107 101-230 85-194 (366)
201 1xfd_A DIP, dipeptidyl aminope 94.0 3.2 0.00011 43.6 19.8 68 2-69 36-107 (723)
202 3vkg_A Dynein heavy chain, cyt 93.9 0.35 1.2E-05 58.9 12.8 13 6-18 1252-1264(3245)
203 3i2n_A WD repeat-containing pr 93.9 1.7 5.7E-05 40.8 15.7 189 38-278 31-243 (357)
204 3no2_A Uncharacterized protein 93.8 3.9 0.00013 37.4 20.9 224 3-283 15-259 (276)
205 1ic2_A Tropomyosin alpha chain 93.7 0.62 2.1E-05 33.8 9.3 44 418-461 7-50 (81)
206 1erj_A Transcriptional repress 93.5 5.6 0.00019 38.2 23.6 148 100-279 134-288 (393)
207 3ghg_A Fibrinogen alpha chain; 93.5 0.68 2.3E-05 45.2 11.6 19 465-483 134-152 (562)
208 2pbi_B Guanine nucleotide-bind 93.3 5.5 0.00019 37.7 19.8 145 152-332 166-315 (354)
209 1flg_A Protein (quinoprotein e 93.3 6.1 0.00021 40.6 19.8 108 4-132 79-201 (582)
210 3mmy_A MRNA export factor; mRN 93.3 5.2 0.00018 37.3 18.6 101 37-179 97-201 (368)
211 1pgu_A Actin interacting prote 93.3 5 0.00017 40.9 19.3 151 103-279 175-329 (615)
212 1pex_A Collagenase-3, MMP-13; 93.3 3.9 0.00013 35.7 16.4 156 33-233 29-197 (207)
213 2qc5_A Streptogramin B lactona 93.1 4.9 0.00017 36.4 25.3 224 37-330 30-258 (300)
214 1ic2_A Tropomyosin alpha chain 92.9 0.51 1.7E-05 34.3 7.8 15 437-451 40-54 (81)
215 2eqb_B RAB guanine nucleotide 92.9 1.2 3.9E-05 33.1 9.6 58 391-448 7-64 (97)
216 3odt_A Protein DOA1; ubiquitin 92.8 5 0.00017 36.5 17.0 107 150-283 194-301 (313)
217 3fvz_A Peptidyl-glycine alpha- 92.8 6.2 0.00021 36.8 30.6 235 4-277 70-321 (329)
218 3dr2_A Exported gluconolactona 92.8 5.9 0.0002 36.5 20.6 165 100-285 96-274 (305)
219 1k32_A Tricorn protease; prote 92.7 10 0.00035 41.9 21.9 75 100-183 389-467 (1045)
220 1q7f_A NHL, brain tumor CG1071 92.7 5.6 0.00019 36.0 23.3 220 4-276 52-278 (286)
221 1rwi_B Serine/threonine-protei 92.6 5.3 0.00018 35.6 23.7 234 29-332 25-264 (270)
222 4a11_B DNA excision repair pro 92.5 1.4 4.9E-05 42.1 13.2 109 151-279 256-366 (408)
223 3vkg_A Dynein heavy chain, cyt 92.5 0.61 2.1E-05 56.9 11.9 14 56-69 1252-1265(3245)
224 3b7f_A Glycosyl hydrolase, BNR 92.4 8 0.00027 37.2 22.5 196 3-235 31-269 (394)
225 3q8t_A Beclin-1; autophagy, AT 92.3 1.6 5.4E-05 32.8 10.0 71 415-485 9-83 (96)
226 3mq7_A Bone marrow stromal ant 92.3 2 6.8E-05 32.7 10.2 7 448-454 74-80 (121)
227 2ghs_A AGR_C_1268P; regucalcin 92.3 7.3 0.00025 36.3 19.2 135 4-176 72-209 (326)
228 4h22_A Leucine-rich repeat fli 92.2 0.51 1.7E-05 35.3 6.9 55 411-465 31-85 (103)
229 2ghs_A AGR_C_1268P; regucalcin 92.2 7.5 0.00026 36.3 22.1 146 38-227 61-209 (326)
230 2pm9_A Protein WEB1, protein t 92.1 8.6 0.00029 36.7 20.4 158 100-279 78-250 (416)
231 2i1j_A Moesin; FERM, coiled-co 92.0 0.13 4.3E-06 52.9 4.8 9 270-278 224-232 (575)
232 2xyi_A Probable histone-bindin 91.9 2.3 7.8E-05 41.6 13.8 100 151-278 243-353 (430)
233 4h22_A Leucine-rich repeat fli 91.8 1.5 5E-05 32.8 8.9 71 416-486 8-82 (103)
234 2xyi_A Probable histone-bindin 91.7 2.5 8.4E-05 41.4 13.9 148 154-332 196-353 (430)
235 4gkw_A Spindle assembly abnorm 91.7 2.6 8.7E-05 32.7 10.4 7 481-487 124-130 (167)
236 1qhu_A Protein (hemopexin); be 91.7 7.1 0.00024 38.6 16.7 187 4-228 168-385 (460)
237 3dm0_A Maltose-binding peripla 91.6 14 0.00047 38.6 20.5 147 100-280 441-594 (694)
238 2pm7_B Protein transport prote 91.6 7.9 0.00027 35.3 19.8 28 38-70 67-94 (297)
239 2oiz_A Aromatic amine dehydrog 91.6 9.4 0.00032 36.2 22.9 66 253-333 265-335 (361)
240 3bas_A Myosin heavy chain, str 91.6 2 6.9E-05 31.7 9.7 30 464-493 58-87 (89)
241 2v66_B Nuclear distribution pr 91.6 3.1 0.00011 31.9 10.8 74 391-464 12-89 (111)
242 3cvf_A Homer-3, homer protein 91.5 1.1 3.9E-05 31.9 7.8 24 432-455 14-37 (79)
243 2ece_A 462AA long hypothetical 91.5 12 0.00039 36.9 19.3 180 37-235 95-296 (462)
244 3mq9_A Bone marrow stromal ant 91.1 2.5 8.6E-05 42.2 13.3 27 462-488 443-469 (471)
245 2efr_A General control protein 91.0 3.9 0.00013 33.5 11.7 71 416-486 34-115 (155)
246 3oja_A Leucine-rich immune mol 90.8 1.3 4.4E-05 44.5 10.9 24 413-436 370-393 (487)
247 2p4o_A Hypothetical protein; p 90.8 9.9 0.00034 35.0 22.0 208 24-282 28-245 (306)
248 1k32_A Tricorn protease; prote 90.7 23 0.00078 39.1 23.4 113 4-132 34-149 (1045)
249 3ol1_A Vimentin; structural ge 90.7 5 0.00017 31.4 11.8 34 448-481 65-102 (119)
250 3dr2_A Exported gluconolactona 90.6 4.8 0.00016 37.1 14.1 165 37-234 96-273 (305)
251 3jsv_C NF-kappa-B essential mo 90.6 1.5 5.3E-05 32.1 7.9 30 394-423 7-36 (94)
252 1wt6_A Myotonin-protein kinase 90.6 1.5 5E-05 31.1 7.5 17 433-449 33-49 (81)
253 2xbg_A YCF48-like protein; pho 90.6 11 0.00038 35.2 26.0 216 13-286 66-287 (327)
254 1yfq_A Cell cycle arrest prote 90.6 10 0.00036 34.9 21.8 27 37-68 67-95 (342)
255 3iox_A AGI/II, PA; alpha helix 90.4 4.6 0.00016 39.4 13.4 73 415-487 32-105 (497)
256 3c75_H MADH, methylamine dehyd 90.3 14 0.00049 36.1 20.5 70 253-334 330-404 (426)
257 3lay_A Zinc resistance-associa 90.3 1.2 4.1E-05 37.5 8.3 15 429-443 90-104 (175)
258 3no2_A Uncharacterized protein 90.3 10 0.00035 34.4 23.8 187 37-283 4-202 (276)
259 3tnu_A Keratin, type I cytoske 90.3 1.1 3.8E-05 35.9 7.9 35 423-457 37-71 (131)
260 1q7f_A NHL, brain tumor CG1071 90.3 10 0.00034 34.2 31.6 235 37-331 40-279 (286)
261 2pm7_B Protein transport prote 90.1 11 0.00037 34.4 19.5 106 37-178 20-133 (297)
262 1pgu_A Actin interacting prote 90.0 18 0.0006 36.6 25.9 111 154-282 175-287 (615)
263 3f3f_A Nucleoporin SEH1; struc 90.0 11 0.00038 34.4 22.9 64 101-179 71-145 (351)
264 3bg1_A Protein SEC13 homolog; 89.8 12 0.00041 34.5 18.2 111 37-183 24-143 (316)
265 2oiz_A Aromatic amine dehydrog 89.8 14 0.00047 35.1 18.5 65 202-279 264-335 (361)
266 3c7x_A Matrix metalloproteinas 89.8 8.3 0.00028 33.2 13.7 152 33-230 11-177 (196)
267 3iz6_a 40S ribosomal protein R 89.7 14 0.00048 35.1 21.9 112 100-228 260-375 (380)
268 2ymu_A WD-40 repeat protein; u 89.5 19 0.00064 36.2 18.7 146 100-283 396-544 (577)
269 3sjl_D Methylamine dehydrogena 89.4 16 0.00054 35.2 21.9 70 253-334 291-365 (386)
270 1pex_A Collagenase-3, MMP-13; 89.4 10 0.00035 32.9 17.4 153 95-282 28-196 (207)
271 3tul_A Cell invasion protein S 89.3 5.3 0.00018 31.7 10.5 68 421-488 52-126 (158)
272 1x79_B RAB GTPase binding effe 89.3 5.4 0.00019 30.5 10.4 11 392-402 9-19 (112)
273 3a7p_A Autophagy protein 16; c 89.2 4.2 0.00014 32.8 10.2 49 415-463 73-121 (152)
274 1x79_B RAB GTPase binding effe 89.2 6.2 0.00021 30.2 10.9 20 446-465 46-65 (112)
275 3cve_A Homer protein homolog 1 88.9 3.2 0.00011 29.0 8.1 20 469-488 42-61 (72)
276 3cvf_A Homer-3, homer protein 88.7 1.8 6E-05 30.9 6.8 31 413-443 9-39 (79)
277 2ocy_A RAB guanine nucleotide 88.6 8.4 0.00029 31.4 11.8 25 419-443 46-70 (154)
278 2b9c_A Striated-muscle alpha t 88.5 4.9 0.00017 32.7 10.5 76 411-486 60-139 (147)
279 3mmy_A MRNA export factor; mRN 88.4 16 0.00053 33.9 22.0 103 38-179 54-162 (368)
280 2ocy_A RAB guanine nucleotide 88.1 2.9 9.9E-05 34.1 8.8 15 429-443 77-91 (154)
281 3k26_A Polycomb protein EED; W 88.1 16 0.00056 33.8 26.1 104 38-178 85-193 (366)
282 1z68_A Fibroblast activation p 88.1 3.4 0.00012 43.4 12.2 61 2-65 35-102 (719)
283 1itv_A MMP9; adaptive molecula 88.0 12 0.00041 32.1 16.6 155 33-232 12-178 (195)
284 3ol1_A Vimentin; structural ge 87.9 4.8 0.00016 31.5 9.8 13 435-447 66-78 (119)
285 1su3_A Interstitial collagenas 87.7 17 0.00058 35.8 16.0 157 32-233 267-437 (450)
286 3lrv_A PRE-mRNA-splicing facto 87.7 18 0.00061 33.7 23.0 191 37-280 47-246 (343)
287 1yfq_A Cell cycle arrest prote 87.6 17 0.00058 33.4 21.2 63 100-177 67-131 (342)
288 3jsv_C NF-kappa-B essential mo 87.3 2.2 7.4E-05 31.4 6.7 15 415-429 7-21 (94)
289 1go4_E MAD1 (mitotic arrest de 87.3 1 3.5E-05 33.8 5.1 32 411-442 13-44 (100)
290 1m1j_B Fibrinogen beta chain; 87.2 8.7 0.0003 37.7 13.2 53 391-443 102-154 (464)
291 3bg1_A Protein SEC13 homolog; 87.2 9.5 0.00033 35.2 13.5 112 100-233 24-142 (316)
292 2mad_H Methylamine dehydrogena 87.1 21 0.00073 34.0 28.5 69 253-334 278-352 (373)
293 3lrv_A PRE-mRNA-splicing facto 87.0 19 0.00066 33.4 26.1 105 100-230 138-246 (343)
294 2xbg_A YCF48-like protein; pho 86.9 20 0.00067 33.4 24.2 213 12-285 24-242 (327)
295 1n7d_A LDL receptor, low-densi 86.7 17 0.00059 38.1 16.4 154 99-283 463-619 (699)
296 3hxj_A Pyrrolo-quinoline quino 86.4 19 0.00067 32.9 18.5 137 99-282 106-249 (330)
297 3gre_A Serine/threonine-protei 86.4 24 0.00082 33.9 18.8 109 100-232 181-296 (437)
298 1wt6_A Myotonin-protein kinase 86.4 4.7 0.00016 28.6 7.7 12 475-486 58-69 (81)
299 3ibp_A Chromosome partition pr 86.3 5.6 0.00019 36.0 10.2 33 455-487 69-101 (302)
300 2xdj_A Uncharacterized protein 86.1 4.3 0.00015 29.4 7.8 33 437-469 26-58 (83)
301 1uix_A RHO-associated kinase; 85.8 4.4 0.00015 28.1 7.3 47 418-464 5-51 (71)
302 2gop_A Trilobed protease; beta 85.7 22 0.00076 32.8 18.9 144 116-285 84-258 (347)
303 4ggc_A P55CDC, cell division c 85.7 20 0.00069 32.4 23.3 226 53-333 45-274 (318)
304 3cve_A Homer protein homolog 1 85.5 6.4 0.00022 27.5 8.0 24 417-440 7-30 (72)
305 1deq_A Fibrinogen (alpha chain 85.3 8.1 0.00028 36.2 11.1 17 387-403 65-81 (390)
306 2ymu_A WD-40 repeat protein; u 85.1 33 0.0011 34.3 19.9 143 100-280 355-500 (577)
307 3m0c_C LDL receptor, low-densi 85.1 43 0.0015 35.7 22.7 148 99-279 481-633 (791)
308 2oto_A M protein; helical coil 84.5 16 0.00053 30.1 13.3 28 413-440 53-80 (155)
309 2i1j_A Moesin; FERM, coiled-co 84.5 0.29 9.8E-06 50.2 1.3 8 309-316 254-261 (575)
310 3c7x_A Matrix metalloproteinas 84.2 19 0.00065 30.8 13.1 154 96-280 11-177 (196)
311 1gen_A Gelatinase A; hydrolase 84.1 21 0.00071 31.2 15.7 155 32-230 35-204 (218)
312 1t3j_A Mitofusin 1; coiled coi 84.1 5 0.00017 29.7 7.4 40 448-487 50-89 (96)
313 3frx_A Guanine nucleotide-bind 84.0 26 0.00088 32.2 21.6 145 37-231 76-230 (319)
314 2e7s_A RAB guanine nucleotide 83.9 3.8 0.00013 32.5 7.2 28 418-445 33-60 (135)
315 3o4h_A Acylamino-acid-releasin 83.7 18 0.00062 36.7 14.7 153 101-282 75-231 (582)
316 2w83_C C-JUN-amino-terminal ki 83.5 4.5 0.00015 28.2 6.5 48 389-436 9-56 (77)
317 3oyo_A Hemopexin fold protein 83.3 23 0.00079 31.1 15.2 107 99-228 69-198 (225)
318 1erj_A Transcriptional repress 83.2 32 0.0011 32.7 20.8 106 151-281 134-241 (393)
319 3v65_B Low-density lipoprotein 83.2 33 0.0011 32.8 22.9 216 4-279 97-319 (386)
320 3mq7_A Bone marrow stromal ant 83.0 14 0.00046 28.2 11.4 21 465-485 74-94 (121)
321 3f3f_A Nucleoporin SEH1; struc 82.4 28 0.00097 31.5 18.5 109 100-230 22-145 (351)
322 2e7s_A RAB guanine nucleotide 82.3 5.1 0.00017 31.8 7.3 32 412-443 48-79 (135)
323 3ba0_A Macrophage metalloelast 82.3 35 0.0012 32.5 16.3 110 100-233 236-355 (365)
324 3vp9_A General transcriptional 82.3 2.9 0.0001 30.7 5.5 14 473-486 72-85 (92)
325 3ni0_A Bone marrow stromal ant 82.1 12 0.00043 27.2 10.0 11 466-476 71-81 (99)
326 3qh9_A Liprin-beta-2; coiled-c 81.7 5.2 0.00018 28.3 6.4 8 415-422 31-38 (81)
327 4a5s_A Dipeptidyl peptidase 4 81.5 52 0.0018 34.5 17.7 17 116-132 91-107 (740)
328 1t6f_A Geminin; coiled-coil, c 81.2 3.8 0.00013 23.7 4.5 28 461-488 6-33 (37)
329 1npe_A Nidogen, entactin; glyc 81.1 29 0.001 30.8 24.6 197 31-282 39-242 (267)
330 1xfd_A DIP, dipeptidyl aminope 80.8 30 0.001 36.0 15.5 107 118-234 38-149 (723)
331 2yy0_A C-MYC-binding protein; 80.0 2.5 8.7E-05 27.6 4.1 26 436-461 24-49 (53)
332 1z68_A Fibroblast activation p 79.4 41 0.0014 35.0 16.0 148 116-279 223-394 (719)
333 2efr_A General control protein 79.4 24 0.00083 28.8 13.4 28 433-460 79-106 (155)
334 1vcs_A Vesicle transport throu 79.0 12 0.00042 28.2 8.4 24 466-489 71-94 (102)
335 2mad_H Methylamine dehydrogena 79.0 45 0.0015 31.7 27.3 73 202-283 277-355 (373)
336 1ik9_A DNA repair protein XRCC 78.9 15 0.0005 32.0 9.9 13 453-465 183-195 (213)
337 4fi5_A Nucleoprotein; structur 78.9 9.9 0.00034 28.7 7.5 21 469-489 69-89 (113)
338 1lwu_C Fibrinogen gamma chain; 78.8 2.6 8.9E-05 39.3 5.4 24 436-459 31-54 (323)
339 1m1j_C Fibrinogen gamma chain; 78.4 21 0.00073 34.4 11.9 12 411-422 56-67 (409)
340 2fp8_A Strictosidine synthase; 78.4 41 0.0014 30.8 15.6 187 4-228 102-313 (322)
341 1deb_A APC protein, adenomatou 78.1 5.1 0.00017 25.2 4.8 42 413-454 6-47 (54)
342 1hxn_A Hemopexin, HPX; heme, b 78.1 21 0.00072 31.2 11.0 107 91-227 64-196 (219)
343 3mq9_A Bone marrow stromal ant 78.0 19 0.00065 35.6 12.1 9 149-157 112-120 (471)
344 4emc_A Monopolin complex subun 78.0 13 0.00043 31.2 8.6 20 435-454 38-57 (190)
345 3m91_A Proteasome-associated A 77.1 4.7 0.00016 26.0 4.6 24 419-442 18-41 (51)
346 1s1c_X RHO-associated, coiled- 77.0 10 0.00035 26.3 6.6 30 415-444 4-33 (71)
347 1l8d_A DNA double-strand break 77.0 22 0.00077 27.1 10.3 15 470-484 86-100 (112)
348 3qh9_A Liprin-beta-2; coiled-c 76.9 16 0.00054 25.9 7.5 17 470-486 55-71 (81)
349 2xe4_A Oligopeptidase B; hydro 76.6 78 0.0027 33.3 17.1 142 117-276 247-398 (751)
350 1gmj_A ATPase inhibitor; coile 76.4 11 0.00036 27.1 6.7 15 464-478 60-74 (84)
351 2hes_X YDR267CP; beta-propelle 76.4 47 0.0016 30.5 18.6 160 100-288 24-194 (330)
352 1itv_A MMP9; adaptive molecula 76.1 36 0.0012 29.0 16.9 151 95-280 11-176 (195)
353 1go4_E MAD1 (mitotic arrest de 75.9 15 0.00051 27.5 7.7 26 429-454 17-42 (100)
354 3ghg_B Fibrinogen beta chain; 75.4 21 0.00071 34.7 10.7 25 400-424 99-123 (461)
355 3lay_A Zinc resistance-associa 75.1 17 0.00056 30.6 8.9 14 466-479 117-130 (175)
356 1fxk_A Prefoldin; archaeal pro 74.9 25 0.00084 26.5 10.2 15 415-429 13-27 (107)
357 4fla_A Regulation of nuclear P 74.9 30 0.001 28.2 10.2 28 451-478 113-140 (152)
358 4etp_A Kinesin-like protein KA 74.7 7.8 0.00027 37.6 7.8 32 433-464 12-43 (403)
359 3iv1_A Tumor susceptibility ge 74.6 20 0.00068 25.4 9.4 15 442-456 43-57 (78)
360 2ic6_A Nucleocapsid protein; h 74.5 20 0.00068 25.3 8.2 15 471-485 54-68 (78)
361 2qyw_A Vesicle transport throu 74.5 25 0.00086 26.5 9.7 57 427-485 45-101 (102)
362 2oxj_A Hybrid alpha/beta pepti 74.3 5.9 0.0002 22.7 3.9 27 464-490 3-29 (34)
363 2ece_A 462AA long hypothetical 74.0 70 0.0024 31.4 23.5 218 100-331 95-351 (462)
364 1fxk_A Prefoldin; archaeal pro 73.7 23 0.0008 26.7 9.0 17 412-428 17-33 (107)
365 3c3f_A Alpha/beta peptide with 73.7 5.4 0.00018 22.8 3.7 27 464-490 3-29 (34)
366 3a7p_A Autophagy protein 16; c 73.6 34 0.0012 27.6 10.5 49 411-459 76-124 (152)
367 2zqm_A Prefoldin beta subunit 73.3 29 0.00099 26.6 10.5 21 466-486 88-108 (117)
368 2aze_A Transcription factor DP 73.3 10 0.00035 30.8 6.8 31 437-467 11-41 (155)
369 3iox_A AGI/II, PA; alpha helix 73.0 39 0.0013 33.0 11.9 21 466-486 77-97 (497)
370 2xzm_R RACK1; ribosome, transl 72.9 59 0.002 30.0 17.5 222 37-319 87-331 (343)
371 3ba0_A Macrophage metalloelast 72.9 66 0.0022 30.5 15.2 156 95-283 185-355 (365)
372 4d9s_A UVB-resistance protein 72.8 68 0.0023 30.8 14.3 148 29-210 182-354 (406)
373 1gk4_A Vimentin; intermediate 72.5 24 0.00083 25.4 10.0 13 466-478 65-77 (84)
374 4a5s_A Dipeptidyl peptidase 4 71.9 1E+02 0.0034 32.3 23.4 114 169-285 229-360 (740)
375 1xaw_A Occludin; coiled-coil, 71.8 27 0.00091 27.9 8.8 36 400-435 49-84 (140)
376 3ibp_A Chromosome partition pr 71.2 35 0.0012 30.9 10.4 9 415-423 29-37 (302)
377 1jof_A Carboxy-CIS,CIS-muconat 71.1 68 0.0023 29.9 20.2 287 5-333 18-342 (365)
378 4dci_A Uncharacterized protein 70.9 33 0.0011 27.8 9.3 22 466-487 81-102 (150)
379 3m48_A General control protein 70.8 7.2 0.00025 22.2 3.7 26 466-491 4-29 (33)
380 3swk_A Vimentin; cytoskeleton, 70.6 28 0.00095 25.3 9.0 6 467-472 68-73 (86)
381 1ijq_A LDL receptor, low-densi 70.6 65 0.0022 29.6 24.7 220 3-280 10-240 (316)
382 3ghg_C Fibrinogen gamma chain; 70.4 34 0.0012 32.9 10.9 9 451-459 104-112 (411)
383 3hxj_A Pyrrolo-quinoline quino 70.3 63 0.0022 29.2 17.0 48 2-61 116-165 (330)
384 3frx_A Guanine nucleotide-bind 70.0 65 0.0022 29.3 18.7 51 118-179 177-229 (319)
385 1npe_A Nidogen, entactin; glyc 69.7 59 0.002 28.7 22.9 156 31-233 82-243 (267)
386 1uo4_A General control protein 69.4 7.2 0.00025 22.4 3.5 27 465-491 4-30 (34)
387 2zqm_A Prefoldin beta subunit 69.4 36 0.0012 26.1 9.9 21 467-487 82-102 (117)
388 1l8d_A DNA double-strand break 68.8 36 0.0012 25.9 11.1 15 470-484 79-93 (112)
389 3c3g_A Alpha/beta peptide with 68.8 8.2 0.00028 21.9 3.7 26 465-490 3-28 (33)
390 1m1j_A Fibrinogen alpha subuni 68.8 55 0.0019 31.5 11.6 13 391-403 67-79 (491)
391 3v64_C Agrin; beta propeller, 68.5 77 0.0026 29.6 25.4 187 37-279 84-276 (349)
392 3m9b_A Proteasome-associated A 68.3 6.3 0.00021 34.9 4.9 20 468-487 74-93 (251)
393 3o4h_A Acylamino-acid-releasin 68.2 53 0.0018 33.1 13.0 111 100-232 121-231 (582)
394 4dk0_A Putative MACA; alpha-ha 68.2 13 0.00043 35.5 7.7 20 466-485 133-152 (369)
395 2p9w_A MAL S 1 allergenic prot 68.1 79 0.0027 29.5 18.1 145 100-263 147-305 (334)
396 4dci_A Uncharacterized protein 68.0 36 0.0012 27.6 9.0 14 466-479 88-101 (150)
397 3fpp_A Macrolide-specific effl 67.6 7.7 0.00026 36.6 6.0 16 471-486 130-145 (341)
398 2wvr_A Geminin; DNA replicatio 67.1 26 0.0009 29.6 8.1 11 411-421 116-126 (209)
399 1gen_A Gelatinase A; hydrolase 67.1 63 0.0022 28.0 18.2 151 95-280 35-204 (218)
400 3hrp_A Uncharacterized protein 67.0 92 0.0031 29.9 31.9 202 37-285 141-361 (409)
401 1nr0_A Actin interacting prote 66.8 1.1E+02 0.0039 30.9 26.9 26 37-67 250-275 (611)
402 2bni_A General control protein 66.7 8.1 0.00028 22.2 3.4 27 464-490 3-29 (34)
403 2w6b_A RHO guanine nucleotide 66.0 24 0.00081 22.8 5.9 28 452-479 17-44 (56)
404 1kd8_B GABH BLL, GCN4 acid bas 65.4 9.8 0.00033 22.1 3.6 21 466-486 5-25 (36)
405 1d7m_A Cortexillin I; coiled-c 65.1 35 0.0012 24.4 11.8 25 433-457 34-58 (101)
406 3a2a_A Voltage-gated hydrogen 64.7 11 0.00037 24.3 4.1 22 472-493 28-49 (58)
407 1gd2_E Transcription factor PA 64.7 17 0.00059 25.2 5.6 20 467-486 48-67 (70)
408 3a7o_A Autophagy protein 16; c 64.2 31 0.001 23.6 6.4 40 411-450 33-72 (75)
409 3fpp_A Macrolide-specific effl 64.1 13 0.00043 35.0 6.8 8 471-478 137-144 (341)
410 3trt_A Vimentin; cytoskeleton, 64.1 35 0.0012 24.0 8.4 62 428-489 6-76 (77)
411 1kd8_A GABH AIV, GCN4 acid bas 63.6 8.2 0.00028 22.4 3.1 19 467-485 6-24 (36)
412 1gd2_E Transcription factor PA 63.6 11 0.00037 26.2 4.4 18 435-452 47-64 (70)
413 3m91_A Proteasome-associated A 63.5 18 0.00063 23.2 5.1 20 467-486 28-47 (51)
414 3vp9_A General transcriptional 63.1 42 0.0014 24.6 7.6 48 428-481 40-87 (92)
415 3kci_A Probable E3 ubiquitin-p 63.0 1.1E+02 0.0036 29.2 18.4 243 29-315 62-342 (389)
416 1wle_A Seryl-tRNA synthetase; 63.0 26 0.00088 35.0 8.8 75 390-464 71-149 (501)
417 3lp9_A LS-24; SEED albumin, pl 62.7 7.9 0.00027 34.2 4.6 62 151-229 129-202 (227)
418 1su3_A Interstitial collagenas 62.6 1.2E+02 0.0041 29.7 18.5 154 95-283 267-437 (450)
419 2hy6_A General control protein 62.6 11 0.00036 21.6 3.4 26 464-489 3-28 (34)
420 1m5i_A APC protein; coiled-coi 62.5 50 0.0017 25.2 9.3 9 494-502 117-125 (125)
421 2lw9_A Unconventionnal myosin- 62.5 8.8 0.0003 24.0 3.3 16 464-479 8-23 (51)
422 3t97_C Nuclear pore glycoprote 62.1 9.8 0.00033 25.9 3.9 42 435-476 9-50 (64)
423 2xv5_A Lamin-A/C; structural p 62.1 37 0.0013 23.8 7.0 15 465-479 43-57 (74)
424 4fi5_A Nucleoprotein; structur 62.0 48 0.0016 25.0 7.9 12 391-402 24-35 (113)
425 3swk_A Vimentin; cytoskeleton, 61.9 43 0.0015 24.3 8.5 12 474-485 68-79 (86)
426 2wq1_A General control protein 61.8 13 0.00044 21.1 3.6 25 465-489 3-27 (33)
427 3b7f_A Glycosyl hydrolase, BNR 61.8 1.1E+02 0.0037 28.9 20.4 251 4-285 82-379 (394)
428 1hjb_A Ccaat/enhancer binding 61.6 39 0.0013 24.5 7.3 14 471-484 52-65 (87)
429 4h5i_A Guanine nucleotide-exch 61.6 1E+02 0.0036 28.7 22.7 152 100-277 187-342 (365)
430 3vu4_A KMHSV2; beta-propeller 61.3 1E+02 0.0035 28.5 18.8 66 151-229 206-272 (355)
431 1fxk_C Protein (prefoldin); ar 61.2 58 0.002 25.6 9.5 22 466-487 106-127 (133)
432 3p5b_L Low density lipoprotein 60.9 1.2E+02 0.004 29.0 22.4 148 100-279 170-321 (400)
433 4h5i_A Guanine nucleotide-exch 60.9 1.1E+02 0.0037 28.6 24.5 183 117-331 157-342 (365)
434 4dyl_A Tyrosine-protein kinase 60.7 48 0.0016 32.1 10.2 80 405-486 311-390 (406)
435 2ke4_A CDC42-interacting prote 60.5 50 0.0017 24.6 9.9 9 395-403 21-29 (98)
436 3mov_A Lamin-B1; LMNB1, B-type 60.5 49 0.0017 24.5 8.1 9 467-475 77-85 (95)
437 3etw_A Adhesin A; antiparallel 60.2 57 0.002 25.2 10.4 79 412-490 8-96 (119)
438 2q6q_A Spindle POLE BODY compo 60.0 37 0.0013 23.0 6.8 57 410-466 3-59 (74)
439 3fx0_A NF-kappa-B essential mo 59.9 20 0.00069 26.2 5.4 83 412-494 5-87 (96)
440 1wle_A Seryl-tRNA synthetase; 59.4 85 0.0029 31.2 11.8 100 389-488 41-149 (501)
441 1gk4_A Vimentin; intermediate 59.4 47 0.0016 23.9 8.6 57 432-488 2-59 (84)
442 3u06_A Protein claret segregat 58.9 14 0.00049 35.8 6.0 56 410-465 3-58 (412)
443 2dq0_A Seryl-tRNA synthetase; 58.9 27 0.00092 34.4 8.1 100 389-488 2-102 (455)
444 2wt7_A Proto-oncogene protein 58.3 39 0.0013 22.8 6.5 55 394-448 7-61 (63)
445 3qhy_B Beta-lactamase inhibito 58.1 1.1E+02 0.0037 27.7 16.9 172 29-260 72-243 (282)
446 3ljm_A Coil Ser L9C; de novo d 58.0 18 0.00063 19.3 3.6 27 439-465 2-28 (31)
447 3u0c_A Invasin IPAB, 62 kDa an 57.6 62 0.0021 26.3 8.4 70 412-481 70-143 (201)
448 3mov_A Lamin-B1; LMNB1, B-type 57.5 54 0.0018 24.2 7.6 78 402-479 11-89 (95)
449 2zdi_C Prefoldin subunit alpha 57.4 72 0.0025 25.8 9.3 95 386-480 6-140 (151)
450 2r2v_A GCN4 leucine zipper; co 57.4 17 0.00058 20.9 3.6 31 462-492 1-31 (34)
451 3gp4_A Transcriptional regulat 57.4 64 0.0022 25.8 8.9 68 412-479 62-129 (142)
452 1cxz_B Protein (PKN); protein- 57.1 42 0.0014 24.3 6.6 65 394-458 19-83 (86)
453 3m9b_A Proteasome-associated A 57.0 15 0.0005 32.6 5.2 65 409-473 23-96 (251)
454 3kqg_A Langerin, C-type lectin 57.0 8.1 0.00028 32.5 3.6 45 449-493 3-47 (182)
455 3k29_A Putative uncharacterize 57.0 80 0.0027 25.8 13.1 99 391-490 29-143 (169)
456 3u06_A Protein claret segregat 56.9 27 0.00092 33.9 7.6 55 424-478 3-57 (412)
457 3sjl_D Methylamine dehydrogena 56.9 1.4E+02 0.0047 28.6 21.8 247 37-334 44-322 (386)
458 1gmj_A ATPase inhibitor; coile 56.9 47 0.0016 23.8 6.8 57 393-452 21-79 (84)
459 1ck7_A Protein (gelatinase A); 56.1 75 0.0026 32.7 11.1 159 32-230 448-617 (631)
460 3sja_C Golgi to ER traffic pro 55.9 28 0.00094 23.7 5.2 45 445-489 6-59 (65)
461 3ni0_A Bone marrow stromal ant 55.9 57 0.0019 23.8 10.5 78 406-486 14-91 (99)
462 3hhm_B NISH2 P85alpha; PI3KCA, 55.5 68 0.0023 30.5 10.0 92 403-494 126-237 (373)
463 3hrp_A Uncharacterized protein 55.4 1.5E+02 0.005 28.4 25.2 221 5-264 154-401 (409)
464 2j5u_A MREC protein; bacterial 55.4 10 0.00035 34.1 4.1 42 438-479 19-60 (255)
465 4fla_A Regulation of nuclear P 55.3 83 0.0028 25.5 9.6 80 406-485 68-147 (152)
466 3trt_A Vimentin; cytoskeleton, 55.1 51 0.0018 23.1 8.4 67 392-458 9-76 (77)
467 2zxx_A Geminin; coiled-coil, c 55.0 53 0.0018 23.2 7.2 55 427-481 23-77 (79)
468 2b5u_A Colicin E3; high resolu 54.9 83 0.0029 30.7 10.2 80 395-477 295-374 (551)
469 2w83_C C-JUN-amino-terminal ki 54.6 52 0.0018 23.0 6.6 71 394-464 7-77 (77)
470 2w6a_A ARF GTPase-activating p 54.5 27 0.00091 22.9 4.7 51 410-460 13-63 (63)
471 2dq3_A Seryl-tRNA synthetase; 54.4 22 0.00074 34.8 6.5 71 390-464 31-101 (425)
472 3gre_A Serine/threonine-protei 54.1 1.5E+02 0.0051 28.1 17.0 153 37-230 181-361 (437)
473 2xe4_A Oligopeptidase B; hydro 54.0 1.6E+02 0.0055 30.9 13.9 162 37-234 282-464 (751)
474 2p4o_A Hypothetical protein; p 53.7 1.3E+02 0.0043 27.2 19.9 213 2-259 42-275 (306)
475 4e61_A Protein BIM1; EB1-like 53.6 69 0.0024 24.1 9.4 72 404-475 5-96 (106)
476 3iyk_A VP5; icosahedral virus; 53.6 1.7E+02 0.0057 28.6 12.1 107 384-490 99-210 (526)
477 3qne_A Seryl-tRNA synthetase, 53.4 41 0.0014 33.3 8.3 72 410-481 33-104 (485)
478 3ghg_B Fibrinogen beta chain; 53.3 99 0.0034 30.1 10.6 99 386-484 92-192 (461)
479 4d9s_A UVB-resistance protein 52.9 1.6E+02 0.0055 28.1 22.7 240 29-315 77-354 (406)
480 3c75_H MADH, methylamine dehyd 52.8 1.2E+02 0.0042 29.3 11.7 143 100-259 84-244 (426)
481 2b5u_A Colicin E3; high resolu 52.3 82 0.0028 30.7 9.7 75 413-487 294-374 (551)
482 3nr7_A DNA-binding protein H-N 52.2 39 0.0013 24.5 5.9 59 389-456 12-70 (86)
483 3ajw_A Flagellar FLIJ protein; 52.1 89 0.003 24.9 12.6 107 395-501 18-147 (150)
484 1ses_A Seryl-tRNA synthetase; 51.9 33 0.0011 33.4 7.4 69 390-464 29-97 (421)
485 3s9g_A Protein hexim1; cyclin 51.9 55 0.0019 24.0 6.5 55 392-446 33-87 (104)
486 2akf_A Coronin-1A; coiled coil 51.4 29 0.00098 19.0 4.4 29 442-470 3-31 (32)
487 1x8y_A Lamin A/C; structural p 51.0 67 0.0023 23.2 9.1 81 402-482 2-83 (86)
488 3k6s_A Integrin alpha-X; cell 50.9 2.9E+02 0.01 30.5 16.7 195 143-339 335-549 (1095)
489 2oqq_A Transcription factor HY 50.7 39 0.0013 20.4 5.0 37 426-462 5-41 (42)
490 3kci_A Probable E3 ubiquitin-p 50.7 1.7E+02 0.0057 27.7 13.5 150 29-210 116-290 (389)
491 2aze_A Transcription factor DP 50.5 43 0.0015 27.2 6.5 47 438-484 5-51 (155)
492 1fzc_C Fibrin; blood coagulati 50.5 12 0.00041 34.8 3.8 50 414-463 1-50 (319)
493 2wt7_B Transcription factor MA 50.4 67 0.0023 23.5 6.9 63 388-450 20-88 (90)
494 3sjb_C Golgi to ER traffic pro 50.3 31 0.001 25.3 5.1 47 445-491 23-78 (93)
495 1jnm_A Proto-oncogene C-JUN; B 50.2 12 0.00042 25.2 2.9 44 420-463 18-61 (62)
496 3viq_A SWI5-dependent recombin 49.8 81 0.0028 24.5 7.8 62 441-502 3-76 (122)
497 3uux_B Mitochondrial division 49.7 83 0.0029 27.5 8.6 76 391-466 151-226 (242)
498 2efk_A CDC42-interacting prote 49.7 1.5E+02 0.0051 26.8 12.4 95 391-485 104-221 (301)
499 3aco_A Pacsin2, protein kinase 49.4 1.2E+02 0.004 28.4 10.8 90 396-485 136-247 (350)
500 1nlw_A MAD protein, MAX dimeri 49.0 43 0.0015 23.9 5.7 42 440-481 39-80 (80)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.8e-45 Score=352.51 Aligned_cols=289 Identities=19% Similarity=0.258 Sum_probs=238.6
Q ss_pred CCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECC
Q 010551 22 GARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGT 101 (507)
Q Consensus 22 ~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 101 (507)
++.|.+|..|+++.+++.||++||. .+...+++++||+.+++|..++.+ |.+|.+|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~ 71 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADL----------------QVPRSGLAGCVVGG 71 (308)
T ss_dssp ------------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCC----------------SSCCBSCEEEEETT
T ss_pred ccCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCC----------------CcccccceEEEECC
Confidence 3578889999999999999999998 566789999999999999998643 56799999999999
Q ss_pred EEEEEeccC---CCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 102 KLLILGGHY---KKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 102 ~lyv~GG~~---~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
+||++||.. ......+++++||+.+++|+.+. ++|.+|..|+++.++++||++||.+.. ...+++++||+.++
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERD 147 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTT
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECC---CCCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCC
Confidence 999999984 22234678999999999999997 899999999999999999999998754 35789999999999
Q ss_pred cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEE
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
+|+.+. ++|.+|..|+++++ +++||||||.+.....+++++||+.+++|+.+ .++|.+|..|++++++++|||
T Consensus 148 ~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 148 EWHLVA---PMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI---TAMNTIRSGAGVCVLHNCIYA 220 (308)
T ss_dssp EEEECC---CCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEE
T ss_pred eEeECC---CCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC---CCCCCccccceEEEECCEEEE
Confidence 999997 47889999999988 56799999998777789999999999999997 578899999999999999999
Q ss_pred EeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCC-cCceEEEEECCCCCCCC
Q 010551 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPR 337 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~w~~ 337 (507)
+||.+.....+++++||+.+++|+.++.+| .++.++ +++++.+ .|||+||.++. ..+++++||+..+.|..
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p----~~r~~~--~~~~~~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWTFVAPMK----HRRSAL--GITVHQG--RIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEECCCCS----SCCBSC--EEEEETT--EEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred EeCCCCCCccceEEEEeCCCCcEEECCCCC----CCccce--EEEEECC--EEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 999887767889999999999999987653 334344 4445544 79999998764 57899999999999998
Q ss_pred CcccCCchh
Q 010551 338 PKIFQSPAA 346 (507)
Q Consensus 338 ~~~~~~~~~ 346 (507)
...++.++.
T Consensus 293 ~~~~p~~r~ 301 (308)
T 1zgk_A 293 VTRMTSGRS 301 (308)
T ss_dssp EEECSSCCB
T ss_pred cCCCCCCcc
Confidence 766665543
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=344.43 Aligned_cols=265 Identities=15% Similarity=0.196 Sum_probs=236.4
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.++|+||+.+++|..++ ++|.+|.+|+++++++.||++||.. ....+++++||+.+++|..++.+
T Consensus 24 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~----------- 88 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGP----------- 88 (306)
T ss_dssp TSEEEEETTTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECC-----------
T ss_pred ceEEEecCCCCCEecCC---CCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCC-----------
Confidence 46899999999999998 7999999999999999999999987 67789999999999999998754
Q ss_pred CCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCC
Q 010551 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDR 162 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~ 162 (507)
|.+|.+|++++++++||++||.+......+++++||+.+++|+.+. ++|.+|..|+++.++++||++||.+.
T Consensus 89 -----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 89 -----PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp -----SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEES
T ss_pred -----CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCEEEEECCCCC
Confidence 5579999999999999999998755556889999999999999996 89999999999999999999999875
Q ss_pred CCC---ccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCC
Q 010551 163 SRK---LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 163 ~~~---~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
... ..+++++||+.+++|+.+. ++|.+|..|+++.+ +++|||+||.+.....+++++||+.+++|+.+ ++
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~---~~ 233 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV---SP 233 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEEC---CC
T ss_pred CCCcccccceEEEeCCCCCeEEECC---CccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC---CC
Confidence 543 2899999999999999997 47889999999998 55699999998777789999999999999997 57
Q ss_pred CCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceE
Q 010551 240 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVC 301 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~ 301 (507)
+|.+|..|++++++++|||+||.++....+++++||+.+++|+.++.++ .++.+++++
T Consensus 234 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~----~~r~~~~~~ 291 (306)
T 3ii7_A 234 MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR----AFPVTSCLI 291 (306)
T ss_dssp CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE----CCSCTTCEE
T ss_pred CCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc----cccceeEEE
Confidence 8899999999999999999999887777889999999999999998774 344455444
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=341.98 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=229.2
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.++|+||+.+++|..++ ++|.+|.+|+++++++.||++||..+....+++++||+.+++|+.++.+
T Consensus 30 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~----------- 95 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM----------- 95 (302)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC-----------
T ss_pred CcEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC-----------
Confidence 46899999999999998 7999999999999999999999988777889999999999999998754
Q ss_pred CCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCC
Q 010551 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDR 162 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~ 162 (507)
|.+|.+|++++++++||++||..... ..+++++||+.+++|+.+. ++|.+|.+|++++++++||++||.+.
T Consensus 96 -----p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 96 -----RDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp -----SSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEET
T ss_pred -----CccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEEEEEeCCCC
Confidence 45799999999999999999987644 3789999999999999997 88999999999999999999999876
Q ss_pred CC-CccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCC
Q 010551 163 SR-KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV 241 (507)
Q Consensus 163 ~~-~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p 241 (507)
.. ...+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.++....+++++||+.+++|+.+ .++|
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~~ 239 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV---ADMN 239 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEE---CCCS
T ss_pred CCCccccEEEEEeCCCCcEEECC---CCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeC---CCCC
Confidence 53 35789999999999999996 47889999999888 55699999998777789999999999999997 5788
Q ss_pred CCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEec
Q 010551 242 TGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 242 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~ 285 (507)
.+|..|+++.++++|||+||.+....++++++||+.+++|+.++
T Consensus 240 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 240 MCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred CccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 89999999999999999999877667889999999999999986
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.5e-43 Score=343.51 Aligned_cols=255 Identities=18% Similarity=0.223 Sum_probs=230.8
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCC----CCCccCCceEEEEccCCceeeeccccccCCCc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGS----RNGRFLSDVQVFDLRSLAWSNLRLETELDADK 78 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~----~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~ 78 (507)
.++|+||+.+++|..++ ++|.+|.+|+++++++.||++||. .+....+++++||+.+++|+.++++
T Consensus 39 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~------- 108 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM------- 108 (308)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC-------
T ss_pred ceEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC-------
Confidence 46899999999999997 799999999999999999999997 5667789999999999999998754
Q ss_pred cccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEc
Q 010551 79 TEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFG 158 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~G 158 (507)
|.+|.+|++++++++||++||..... ..+++++||+.+++|+.+. ++|.+|.+|+++.++++||+||
T Consensus 109 ---------p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~G 175 (308)
T 1zgk_A 109 ---------SVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVA---PMLTRRIGVGVAVLNRLLYAVG 175 (308)
T ss_dssp ---------SSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEC
T ss_pred ---------CcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECC---CCCccccceEEEEECCEEEEEe
Confidence 45799999999999999999987643 3678999999999999997 7999999999999999999999
Q ss_pred CCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCC
Q 010551 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKG 238 (507)
Q Consensus 159 G~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~ 238 (507)
|.+.... .+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.+.....+++++||+.+++|+.+ .
T Consensus 176 G~~~~~~-~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~ 247 (308)
T 1zgk_A 176 GFDGTNR-LNSAECYYPERNEWRMIT---AMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFV---A 247 (308)
T ss_dssp CBCSSCB-CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC---C
T ss_pred CCCCCCc-CceEEEEeCCCCeEeeCC---CCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC---C
Confidence 9976543 899999999999999986 47889999999988 56699999998777889999999999999997 4
Q ss_pred CCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCC
Q 010551 239 DLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 239 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~ 288 (507)
++|.+|..|++++++++|||+||.+.....+++++||+.+++|+.++.+|
T Consensus 248 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 248 PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS
T ss_pred CCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCC
Confidence 78899999999999999999999887777889999999999999997764
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9e-43 Score=336.88 Aligned_cols=255 Identities=18% Similarity=0.293 Sum_probs=231.2
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc---eeeeccccccCCCcc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA---WSNLRLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~~~~~ 79 (507)
.++|+||+.+++|..++ ++|.+|.+|+++++++.||++||..+....+++++||+.+++ |+.++.+
T Consensus 31 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~-------- 99 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM-------- 99 (301)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC--------
T ss_pred eEEEEEcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC--------
Confidence 46899999999999998 689999999999999999999998877788999999999999 9998654
Q ss_pred ccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcC
Q 010551 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGG 159 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG 159 (507)
|.+|.+|+++.++++||++||...... .+++++||+.+++|+.+. ++|.+|.+|++++++++||++||
T Consensus 100 --------p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG 167 (301)
T 2vpj_A 100 --------NVRRGLAGATTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLG---DMQTAREGAGLVVASGVIYCLGG 167 (301)
T ss_dssp --------SSCCBSCEEEEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEETTEEEEECC
T ss_pred --------CCCccceeEEEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECC---CCCCCcccceEEEECCEEEEECC
Confidence 557999999999999999999886543 789999999999999997 78999999999999999999999
Q ss_pred CCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCC
Q 010551 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 160 ~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
.+... ..+++++||+.+++|+.+. ++|.+|..|+++.+ +++|||+||.+.....+++++||+.+++|+.+ .+
T Consensus 168 ~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~ 239 (301)
T 2vpj_A 168 YDGLN-ILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV---TS 239 (301)
T ss_dssp BCSSC-BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE---CC
T ss_pred CCCCc-ccceEEEEeCCCCcEEeCC---CCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC---CC
Confidence 87654 5899999999999999996 47889999999988 55699999998777789999999999999997 57
Q ss_pred CCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCC
Q 010551 240 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~ 288 (507)
+|.+|..|+++.++++|||+||.+.....+++++||+.+++|+.++.+|
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 240 MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC
Confidence 8899999999999999999999877766789999999999999998764
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=345.42 Aligned_cols=276 Identities=15% Similarity=0.202 Sum_probs=232.5
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCC------CCccCCceEEEEccCCceeeeccccccCC
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSR------NGRFLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~------~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 76 (507)
.++|+|||.+++|...+. +.|.+|.+|+++++++.||++||.. .....+++++||+.+++|+.++++
T Consensus 13 ~~~~~yd~~~~~W~~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~----- 85 (315)
T 4asc_A 13 EGAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL----- 85 (315)
T ss_dssp TEEEEEETTTTEEEEEEC--CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB-----
T ss_pred CceEEECCCCCeEecCCC--CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC-----
Confidence 468999999999997442 4477999999999999999999951 123345699999999999988754
Q ss_pred CccccCCCcCCCCCccceeEEEECCEEEEEeccCC--CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEE
Q 010551 77 DKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK--KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRL 154 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~i 154 (507)
|.+|.+|++++++++||++||... .....+++++||+.+++|+.+. ++|.+|.+|+++.++++|
T Consensus 86 -----------p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i 151 (315)
T 4asc_A 86 -----------PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLSHMDLV 151 (315)
T ss_dssp -----------SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEE
T ss_pred -----------CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccceeEEEECCEE
Confidence 557999999999999999999763 3345789999999999999987 799999999999999999
Q ss_pred EEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEec
Q 010551 155 IIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 155 y~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
|+|||.+......+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.+.....+++++||+.+++|+.+
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECC---CCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 999999666667899999999999999987 47889999999988 45699999998777889999999999999997
Q ss_pred ccCCCCCCCCCccEEEEECCeEEEEeccCCC---------CCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEE
Q 010551 235 EIKGDLVTGRAGHAGITIDENWYIVGGGDNN---------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII 305 (507)
Q Consensus 235 ~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~ 305 (507)
.++|.+|..|+++.++++|||+||.+.. ..++++++||+.+++|+.+. +.++.++.++ ++
T Consensus 228 ---~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------~~~r~~~~~~--~~ 296 (315)
T 4asc_A 228 ---EAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------REIAYAAGAT--FL 296 (315)
T ss_dssp ---CCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE------SCSSCCSSCE--EE
T ss_pred ---CCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc------cCCcCccceE--Ee
Confidence 5788999999999999999999997531 23578999999999999983 2344555544 34
Q ss_pred cCceEEEEEcc
Q 010551 306 EGEHHLVAFGG 316 (507)
Q Consensus 306 ~~~~~l~v~GG 316 (507)
+ +.|++++.
T Consensus 297 ~--~~l~v~~~ 305 (315)
T 4asc_A 297 P--VRLNVLRL 305 (315)
T ss_dssp E--EEECGGGS
T ss_pred C--CEEEEEEe
Confidence 3 36777654
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=336.09 Aligned_cols=270 Identities=15% Similarity=0.258 Sum_probs=233.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
.+.||++||... .+++++||+.+++|..++.+ |.+|.+|++++++++||++||.. ....
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~--~~~~ 69 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCP----------------FEKRRDAACVFWDNVVYILGGSQ--LFPI 69 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCC----------------SCCCBSCEEEEETTEEEEECCBS--SSBC
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCC----------------CcccceeEEEEECCEEEEEeCCC--CCCc
Confidence 478999999765 78999999999999988754 55799999999999999999988 4457
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCc
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 196 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~ 196 (507)
+++++||+.+++|+.+. ++|.+|.+|+++.++++||+|||.+......+++++||+.+++|+.+. ++|.+|..|
T Consensus 70 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~ 143 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKL---GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSH 143 (306)
T ss_dssp CEEEEEETTTTEEEEEE---CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSC
T ss_pred ceEEEEeCCCCeEEECC---CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCccee
Confidence 89999999999999997 799999999999999999999999855567899999999999999996 478899999
Q ss_pred eEEEEcCCEEEEEcCCCCCCC----CCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEE
Q 010551 197 SAALHANRYLIVFGGCSHSIF----FNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETI 272 (507)
Q Consensus 197 ~~~~~~~~~l~v~GG~~~~~~----~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 272 (507)
+++.+ +++|||+||...... .+++++||+.+++|+.+ .++|.+|..|+++.++++|||+||.+.....++++
T Consensus 144 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 144 GMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL---CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp EEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEE
T ss_pred EEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC---CCccchhhcceEEEECCEEEEEeCCCCCCCCceEE
Confidence 99988 556999999876655 89999999999999997 57889999999999999999999987776688999
Q ss_pred EEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCC-cCceEEEEECCCCCCCCCcccCCch
Q 010551 273 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPKIFQSPA 345 (507)
Q Consensus 273 ~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~ 345 (507)
+||+.+++|+.++.+|. ++.+ ++++++.+ .|||+||.++. ..+++++||+..+.|.....++.++
T Consensus 220 ~yd~~~~~W~~~~~~p~----~r~~--~~~~~~~~--~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 285 (306)
T 3ii7_A 220 YYDIKLNEWKMVSPMPW----KGVT--VKCAAVGS--IVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFP 285 (306)
T ss_dssp EEETTTTEEEECCCCSC----CBSC--CEEEEETT--EEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCS
T ss_pred EeeCCCCcEEECCCCCC----Cccc--eeEEEECC--EEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccccc
Confidence 99999999999976543 3334 44445544 79999998754 6789999999999999876655544
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.1e-42 Score=331.24 Aligned_cols=277 Identities=17% Similarity=0.240 Sum_probs=231.6
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCC
Q 010551 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK 111 (507)
Q Consensus 32 ~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~ 111 (507)
..+.+++.||++||... ...+++++||+.+++|..++.+ |.+|.+|++++++++||++||...
T Consensus 10 ~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~~ 72 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAEL----------------PSRRCRAGMVYMAGLVFAVGGFNG 72 (302)
T ss_dssp -----CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCC----------------SSCCBSCEEEEETTEEEEESCBCS
T ss_pred cccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccC----------------CcccccceEEEECCEEEEEeCcCC
Confidence 34456889999999764 4678899999999999998644 557999999999999999999875
Q ss_pred CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 112 KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 112 ~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
.. ..+++++||+.+++|+.++ ++|.+|..|+++.++++||+|||.+.. ..++++++||+.+++|+.+. ++|.
T Consensus 73 ~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~---~~p~ 144 (302)
T 2xn4_A 73 SL-RVRTVDSYDPVKDQWTSVA---NMRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVA---PMNT 144 (302)
T ss_dssp SS-BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEEC---CCSS
T ss_pred Cc-cccceEEECCCCCceeeCC---CCCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecC---CCCC
Confidence 54 3688999999999999998 899999999999999999999998754 35789999999999999996 4788
Q ss_pred CCCCceEEEEcCCEEEEEcCCCCC--CCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcc
Q 010551 192 PRYDHSAALHANRYLIVFGGCSHS--IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~v~GG~~~~--~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~ 269 (507)
+|..|+++++ +++|||+||.+.. ...+++++||+.+++|+.+ .++|.+|..|++++++++|||+||.++....+
T Consensus 145 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 220 (302)
T 2xn4_A 145 RRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI---AEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRK 220 (302)
T ss_dssp CCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBSSSSBCC
T ss_pred cccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC---CCCccccccccEEEECCEEEEECCCCCCcccc
Confidence 9999999888 5569999998655 3578999999999999997 57889999999999999999999988766678
Q ss_pred eEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCC-cCceEEEEECCCCCCCCCc-ccCCch
Q 010551 270 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPK-IFQSPA 345 (507)
Q Consensus 270 ~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~w~~~~-~~~~~~ 345 (507)
++++||+.+++|+.++.++. ++.+ +.++.+++ .|||+||.++. ..+++++||+..+.|...+ .++.++
T Consensus 221 ~~~~yd~~~~~W~~~~~~~~----~r~~--~~~~~~~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r 290 (302)
T 2xn4_A 221 SVEVYDPTTNAWRQVADMNM----CRRN--AGVCAVNG--LLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGR 290 (302)
T ss_dssp CEEEEETTTTEEEEECCCSS----CCBS--CEEEEETT--EEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCC
T ss_pred eEEEEeCCCCCEeeCCCCCC----cccc--CeEEEECC--EEEEECCcCCCcccccEEEEcCCCCeEEECCcccCccc
Confidence 99999999999999986643 3333 34445544 79999998754 5789999999999998765 444443
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-42 Score=337.56 Aligned_cols=274 Identities=16% Similarity=0.234 Sum_probs=231.2
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCC------CccCCceEEEEccCCceeeeccccccCCC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRN------GRFLSDVQVFDLRSLAWSNLRLETELDAD 77 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~------~~~~~~~~~~d~~~~~W~~~~~~~~~~~~ 77 (507)
++|+|||.+++|...+. +.|.+|.+|+++++++.||++||... ....+++++||+.+++|..++.+
T Consensus 25 ~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~------ 96 (318)
T 2woz_A 25 AAVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL------ 96 (318)
T ss_dssp EEEEEETTTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB------
T ss_pred ceEEECCCCCceecccC--CccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC------
Confidence 47999999999999654 45689999999999999999999531 12234599999999999998754
Q ss_pred ccccCCCcCCCCCccceeEEEECCEEEEEeccCC-CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEE
Q 010551 78 KTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK-KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLII 156 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~ 156 (507)
|.+|.+|++++++++||++||... .....+++++||+.+++|+.+. ++|.+|.+|++++++++||+
T Consensus 97 ----------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv 163 (318)
T 2woz_A 97 ----------PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNGMIYC 163 (318)
T ss_dssp ----------SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETTEEEE
T ss_pred ----------CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECCEEEE
Confidence 457999999999999999999874 3345789999999999999997 89999999999999999999
Q ss_pred EcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEeccc
Q 010551 157 FGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 157 ~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
|||.+......+++++||+.+++|+.+. ++|.+|..|+++++ +++|||+||.+.....+++++||+.+++|+.+
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-- 237 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM-- 237 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEEC--
T ss_pred EcCCCCCCCccceEEEEcCCCCEEEECC---CCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEEC--
Confidence 9998766667899999999999999997 47889999999888 45699999998777788999999999999997
Q ss_pred CCCCCCCCCccEEEEECCeEEEEeccCCC---------CCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcC
Q 010551 237 KGDLVTGRAGHAGITIDENWYIVGGGDNN---------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG 307 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~ 307 (507)
.++|.+|..|+++.++++|||+||.+.. ...+++|+||+.+++|+.+ + |.++.++.++. +
T Consensus 238 -~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~----~~~r~~~~~~~--~-- 306 (318)
T 2woz_A 238 -TEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L----KEIRYASGASC--L-- 306 (318)
T ss_dssp -CCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E----SCCGGGTTCEE--E--
T ss_pred -CCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c----cccccccccee--e--
Confidence 5788899999999999999999997642 2368899999999999998 2 33455555443 3
Q ss_pred ceEEEEEc
Q 010551 308 EHHLVAFG 315 (507)
Q Consensus 308 ~~~l~v~G 315 (507)
++.|||+.
T Consensus 307 ~~~iyi~~ 314 (318)
T 2woz_A 307 ATRLNLFK 314 (318)
T ss_dssp EEEEEGGG
T ss_pred CCEEEEEE
Confidence 33677654
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=331.86 Aligned_cols=282 Identities=19% Similarity=0.284 Sum_probs=235.9
Q ss_pred CCCCccccceEEEECCEEEEEcC-CCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECC
Q 010551 23 ARPSPRYKHAAAVFDQKLYIVGG-SRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGT 101 (507)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyi~GG-~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 101 (507)
+.+.|| ..+++.||++|| .......+++++||+.+++|..++.+ |.+|.+|+++.+++
T Consensus 5 ~~~~pr-----~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~ 63 (301)
T 2vpj_A 5 PRTRAR-----LGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSI----------------TRKRRYVASVSLHD 63 (301)
T ss_dssp -------------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCC----------------SSCCBSCEEEEETT
T ss_pred cccccc-----ccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCC----------------ChhhccccEEEECC
Confidence 345566 236889999999 66677889999999999999998754 45799999999999
Q ss_pred EEEEEeccCCCCCCcceEEEEECCCCc---EEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 102 KLLILGGHYKKSSDSMIVRFIDLETNL---CGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 102 ~lyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
+||++||..... ..+++++||+.+++ |+.+. ++|.+|..|+++.++++||++||.+... ..+++++||+.++
T Consensus 64 ~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 64 RIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNID 138 (301)
T ss_dssp EEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTT
T ss_pred EEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCC
Confidence 999999987443 47889999999999 99996 8999999999999999999999998543 4889999999999
Q ss_pred cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEE
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
+|+.+.. +|.+|..|+++++ +++|||+||.+.....+++++||+.+++|+.+ .++|.+|..|+++.++++|||
T Consensus 139 ~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v 211 (301)
T 2vpj_A 139 QWSMLGD---MQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGAGVALLNDHIYV 211 (301)
T ss_dssp EEEEEEE---CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEE
T ss_pred eEEECCC---CCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeC---CCCCcccccceEEEECCEEEE
Confidence 9999974 6889999999988 55699999998777889999999999999997 578899999999999999999
Q ss_pred EeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCC-cCceEEEEECCCCCCCC
Q 010551 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPR 337 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~w~~ 337 (507)
+||.+.....+++++||+.+++|+.++.+| .++..+ +++.+++ .|||+||.++. ..+++++||+..+.|..
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p----~~r~~~--~~~~~~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTDSWTTVTSMT----TPRCYV--GATVLRG--RLYAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEEECCCS----SCCBSC--EEEEETT--EEEEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred EeCCCCCcccceEEEEeCCCCcEEECCCCC----Ccccce--eEEEECC--EEEEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 999887766889999999999999997654 334344 4445544 79999998754 46899999999999987
Q ss_pred CcccCCch
Q 010551 338 PKIFQSPA 345 (507)
Q Consensus 338 ~~~~~~~~ 345 (507)
...++.++
T Consensus 284 ~~~~~~~r 291 (301)
T 2vpj_A 284 VTSMGTQR 291 (301)
T ss_dssp EEEEEEEE
T ss_pred cCCCCccc
Confidence 76555443
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=325.70 Aligned_cols=262 Identities=17% Similarity=0.260 Sum_probs=221.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccC-----C
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY-----K 111 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-----~ 111 (507)
.+.||++|| +++++||+.+++|.. +.+ ..|.+|.+|++++++++||++||.. .
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~--------------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 61 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASL--------------SSQVPKNHVSLVTKENQVFVAGGLFYNEDNK 61 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EEC--------------CCCSCSSEEEEECTTCCEEEEEEEEECSSCS
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCC--------------CCCCCccceEEEEECCEEEEEcCcccCCCCC
Confidence 467999999 679999999999986 322 2356899999999999999999963 2
Q ss_pred CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCC--CCCCccCcEEEEECCCCcEEEeccCCCC
Q 010551 112 KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGED--RSRKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 112 ~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~--~~~~~~n~~~~~d~~t~~W~~~~~~~~~ 189 (507)
.....+++++||+.+++|+.++ ++|.+|.+|+++.++++||+|||.+ ......+++++||+.+++|+.+. ++
T Consensus 62 ~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~ 135 (315)
T 4asc_A 62 EDPMSAYFLQFDHLDSEWLGMP---PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PL 135 (315)
T ss_dssp SSCEEEEEEEEETTTTEEEECC---CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CC
T ss_pred ccccccceEEecCCCCeEEECC---CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CC
Confidence 2223556999999999999987 8999999999999999999999975 23456899999999999999987 47
Q ss_pred CCCCCCceEEEEcCCEEEEEcCC-CCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCc
Q 010551 190 PAPRYDHSAALHANRYLIVFGGC-SHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGC 268 (507)
Q Consensus 190 p~~r~~~~~~~~~~~~l~v~GG~-~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~ 268 (507)
|.+|.+|+++.+++ +||||||. ......+++++||+.+++|+.+ .++|.+|..|++++++++|||+||.+.....
T Consensus 136 p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 211 (315)
T 4asc_A 136 PYVVYGHTVLSHMD-LVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL---APMQTARSLFGATVHDGRIIVAAGVTDTGLT 211 (315)
T ss_dssp SSCCBSCEEEEETT-EEEEECCBCTTSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEEEEECSSSEE
T ss_pred CCcccceeEEEECC-EEEEEeCCCCCCcccceEEEEeCCCCeEEEC---CCCCCchhceEEEEECCEEEEEeccCCCCcc
Confidence 88999999998854 59999998 5567789999999999999997 5788999999999999999999998877778
Q ss_pred ceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCC----------CcCceEEEEECCCCCCCCC
Q 010551 269 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG----------KYNNEVFVMRLKPRDIPRP 338 (507)
Q Consensus 269 ~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~----------~~~~~~~~~~~~~~~w~~~ 338 (507)
+++++||+.+++|+.++++| .+|.++ +++.+.+ .|||+||.++ ...+++|+||+.++.|...
T Consensus 212 ~~~~~yd~~~~~W~~~~~~p----~~r~~~--~~~~~~~--~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 212 SSAEVYSITDNKWAPFEAFP----QERSSL--SLVSLVG--TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEETTTTEEEEECCCS----SCCBSC--EEEEETT--EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCeEEECCCCC----Ccccce--eEEEECC--EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 89999999999999997653 344444 4445544 8999999853 3468999999999999876
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.1e-40 Score=328.31 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=219.5
Q ss_pred CCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEcc--CCceeeeccccccCCCccccCCCcCCCCCccceeEEEEC
Q 010551 23 ARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLR--SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWG 100 (507)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~--~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~ 100 (507)
++|.+|.+|++++++++|||+||... +++++||+. +++|+.++.++ +.+|.+|++++++
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p---------------~~~R~~~~~~~~~ 65 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFP---------------GGPRDQATSAFID 65 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCT---------------TCCCBSCEEEEET
T ss_pred CCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCC---------------CCcCccceEEEEC
Confidence 78999999999999999999999653 589999998 48999987543 1589999999999
Q ss_pred CEEEEEeccCC----CCCCcceEEEEECCCCcEEEeecCCCCC-CCCcCcEEEEECCEEEEEcCCCCCC-----------
Q 010551 101 TKLLILGGHYK----KSSDSMIVRFIDLETNLCGVMETSGKVP-VTRGGHSVTLVGSRLIIFGGEDRSR----------- 164 (507)
Q Consensus 101 ~~lyv~GG~~~----~~~~~~~~~~yd~~t~~W~~~~~~g~~p-~~r~~~~~~~~~~~iy~~GG~~~~~----------- 164 (507)
++|||+||... .....+++++||+.+++|+.+. +++ .+|.+|++++++++||+|||.+...
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLM---SHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECS---CCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECC---CCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence 99999999822 2235788999999999999998 444 9999999999999999999986431
Q ss_pred ----------------------CccCcEEEEECCCCcEEEeccCCCCCCCCC-CceEEEEcCCEEEEEcCCCCC-CCCCc
Q 010551 165 ----------------------KLLNDVHFLDLETMTWDAVEVTQTPPAPRY-DHSAALHANRYLIVFGGCSHS-IFFND 220 (507)
Q Consensus 165 ----------------------~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~-~~~~~~~~~~~l~v~GG~~~~-~~~~~ 220 (507)
...+++++||+.+++|+.+.. +|.++. +|+++++ +++||||||.+.. ...++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE---SPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE---CSSCCCBSCEEEEE-TTEEEEECCEEETTEECCC
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC---CCCCCcccccEEEE-CCEEEEEeeecCCCcccCc
Confidence 246899999999999999964 565544 4877777 5569999997543 45789
Q ss_pred EEEEEC--CCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCC-----------------CCcceEEEEECCCCcE
Q 010551 221 LHVLDL--QTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNN-----------------NGCQETIVLNMTKLAW 281 (507)
Q Consensus 221 i~~~d~--~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-----------------~~~~~~~~~d~~~~~W 281 (507)
++.||+ .+++|+.+... +.|.+|..|++++++++|||+||.+.. ..++++++||+.+++|
T Consensus 219 v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W 297 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW 297 (357)
T ss_dssp EEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C
T ss_pred eEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce
Confidence 999987 89999997432 334446788899999999999996432 2246799999999999
Q ss_pred EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCC--cCceEEEEECCCCCCCCCc
Q 010551 282 SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK--YNNEVFVMRLKPRDIPRPK 339 (507)
Q Consensus 282 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~--~~~~~~~~~~~~~~w~~~~ 339 (507)
+.++.+|. +|..+ +++.+.+ .||||||++.. ..++++.|++..+.|....
T Consensus 298 ~~~~~~p~----~r~~~--~~~~~~~--~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 298 DKSGELSQ----GRAYG--VSLPWNN--SLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEECSS----CCBSS--EEEEETT--EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eeCCCCCC----Ccccc--eeEEeCC--EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 99977643 44444 3444544 79999998753 4689999999999887543
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-40 Score=319.49 Aligned_cols=271 Identities=16% Similarity=0.254 Sum_probs=224.9
Q ss_pred CCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEE
Q 010551 25 PSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLL 104 (507)
Q Consensus 25 p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~ly 104 (507)
..+|.++.. .+.||++||. ++++||+.+++|...+. ..|.+|.+|+++.++++||
T Consensus 6 ~~~r~~~~~---~~~i~~~GG~-------~~~~yd~~~~~W~~~~~---------------~~~~~r~~~~~~~~~~~ly 60 (318)
T 2woz_A 6 DIPRHGMFV---KDLILLVNDT-------AAVAYDPMENECYLTAL---------------AEQIPRNHSSIVTQQNQVY 60 (318)
T ss_dssp SSCCCCCSE---EEEEEEECSS-------EEEEEETTTTEEEEEEE---------------CTTSCSSEEEEECSSSCEE
T ss_pred cccccccee---cchhhhcccc-------ceEEECCCCCceecccC---------------CccCCccceEEEEECCEEE
Confidence 456777654 4689999993 48999999999988332 2256899999999999999
Q ss_pred EEeccCCC-----CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCC-CCCccCcEEEEECCCC
Q 010551 105 ILGGHYKK-----SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDR-SRKLLNDVHFLDLETM 178 (507)
Q Consensus 105 v~GG~~~~-----~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~-~~~~~n~~~~~d~~t~ 178 (507)
++||.... ....+++++||+.+++|+.++ ++|.+|..|+++.++++||++||.+. .....+++++||+.++
T Consensus 61 v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 137 (318)
T 2woz_A 61 VVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA 137 (318)
T ss_dssp EEESSCC-------CCCBEEEEEETTTTEEEECS---CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT
T ss_pred EECCcccCccccCCCccccEEEEeCCCCcEEECC---CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC
Confidence 99996321 123456999999999999987 89999999999999999999999863 3456899999999999
Q ss_pred cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCC-CCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEE
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCS-HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWY 257 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~-~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~ 257 (507)
+|+.+. ++|.+|.+|+++++ +++||||||.+ .....+++++||+.+++|+.+ .++|.+|..|++++++++||
T Consensus 138 ~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 138 KWSEVK---NLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL---APMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp EEEEEC---CCSSCEESCEEEEE-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEE
T ss_pred CEeECC---CCCCcccccEEEEE-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC---CCCCCCcccceEEEECCEEE
Confidence 999997 47889999999887 55699999984 445688999999999999997 57889999999999999999
Q ss_pred EEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCC----------CcCceEEE
Q 010551 258 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG----------KYNNEVFV 327 (507)
Q Consensus 258 v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~----------~~~~~~~~ 327 (507)
|+||.+.....+++++||+.+++|+.++.+|. ++..+ +++.+.+ .|||+||.+. ...+++|+
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~----~r~~~--~~~~~~~--~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ----ERSSI--SLVSLAG--SLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEEECCCCSS----CCBSC--EEEEETT--EEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred EEcCcCCCCccceEEEEECCCCeEEECCCCCC----cccce--EEEEECC--EEEEECCeeccCCCCceeccceeeeEEE
Confidence 99998776667899999999999999976543 34444 4445544 7999999864 34789999
Q ss_pred EECCCCCCCCC
Q 010551 328 MRLKPRDIPRP 338 (507)
Q Consensus 328 ~~~~~~~w~~~ 338 (507)
||+.++.|...
T Consensus 283 yd~~~~~W~~~ 293 (318)
T 2woz_A 283 YEDDKKEWAGM 293 (318)
T ss_dssp EETTTTEEEEE
T ss_pred EeCCCCEehhh
Confidence 99999999876
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=6e-39 Score=317.80 Aligned_cols=260 Identities=19% Similarity=0.328 Sum_probs=210.8
Q ss_pred CCCeEeeCC--CCceEEeecCCCCC-CccccceEEEECCEEEEEcCC-C----CCccCCceEEEEccCCceeeecccccc
Q 010551 3 SGSWHLELP--YDLWVTLPVSGARP-SPRYKHAAAVFDQKLYIVGGS-R----NGRFLSDVQVFDLRSLAWSNLRLETEL 74 (507)
Q Consensus 3 ~~~~~~d~~--~~~W~~~~~~~~~p-~~r~~~~~~~~~~~iyi~GG~-~----~~~~~~~~~~~d~~~~~W~~~~~~~~~ 74 (507)
.++|+||+. +++|..++ ++| .+|.+|++++++++|||+||. . .....+++++||+.+++|+.+++++
T Consensus 31 ~~~~~~d~~~~~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-- 105 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-- 105 (357)
T ss_dssp TCEEEEETTSSSCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--
T ss_pred CeEEEEccccCCCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--
Confidence 478999998 49999998 688 899999999999999999997 2 2456899999999999999988653
Q ss_pred CCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCC---------------------------------CCcceEEE
Q 010551 75 DADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS---------------------------------SDSMIVRF 121 (507)
Q Consensus 75 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~---------------------------------~~~~~~~~ 121 (507)
|.+|.+|++++++++||++||.+... ...+++++
T Consensus 106 -------------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 106 -------------PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp -------------SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred -------------CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 56899999999999999999986432 13578999
Q ss_pred EECCCCcEEEeecCCCCCCCC-cCcEEEEECCEEEEEcCCCCCCCccCcEEEEEC--CCCcEEEeccCCCCCCCCCCceE
Q 010551 122 IDLETNLCGVMETSGKVPVTR-GGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL--ETMTWDAVEVTQTPPAPRYDHSA 198 (507)
Q Consensus 122 yd~~t~~W~~~~~~g~~p~~r-~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~--~t~~W~~~~~~~~~p~~r~~~~~ 198 (507)
||+.+++|+.+. ++|.++ .+|++++++++||+|||.+......+++++||+ .+++|+.+... +.|.+|.+|++
T Consensus 173 yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~ 248 (357)
T 2uvk_A 173 FDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFA 248 (357)
T ss_dssp EETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS-STTTCCBSCEE
T ss_pred EeCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCCcccccceE
Confidence 999999999997 677665 459999999999999998765556889999987 89999999754 23445667778
Q ss_pred EEEcCCEEEEEcCCCC-----------------CCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEec
Q 010551 199 ALHANRYLIVFGGCSH-----------------SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGG 261 (507)
Q Consensus 199 ~~~~~~~l~v~GG~~~-----------------~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG 261 (507)
++++ ++||||||.+. ...++++++||+.+++|+.+ +++|.+|..|+++.++++||||||
T Consensus 249 ~~~~-~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 249 GISN-DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNNSLLIIGG 324 (357)
T ss_dssp EEET-TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE---EECSSCCBSSEEEEETTEEEEEEE
T ss_pred EEEC-CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC---CCCCCCcccceeEEeCCEEEEEee
Confidence 7774 56999999642 22346899999999999997 578899999999999999999999
Q ss_pred cCCCCC-cceEEEEECCCCcEEEeccCC
Q 010551 262 GDNNNG-CQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 262 ~~~~~~-~~~~~~~d~~~~~W~~v~~~~ 288 (507)
.+.... ++++++|++++++|....+.+
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 876544 689999999999999987654
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.3e-38 Score=340.43 Aligned_cols=284 Identities=14% Similarity=0.149 Sum_probs=229.5
Q ss_pred CCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeec-cccccCCCccccCCCcCCCCCccceeEEEE--
Q 010551 23 ARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLR-LETELDADKTEDSGLLEVLPPMSDHCMVKW-- 99 (507)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-- 99 (507)
..|.+|++|+++ +++.||++||... ...+++++||+.+++|..++ +.+. ...|.+|.+|+++++
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~-----------~~~p~~R~~hs~~~~~~ 450 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSS-----------SEVPVARMCHTFTTISR 450 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCC-----------SCCCCCCBSCEEEEETT
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCC-----------CCCCccccceEEEEEcc
Confidence 466677776654 8999999999877 77899999999999999988 4321 245789999999999
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
+++||++||........+++|+||+.+++|+.+. ++|.+|.+|+++++ +++||+|||.+... ++++||+.++
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~ 523 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE 523 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC
Confidence 9999999999876656789999999999999997 89999999999997 99999999987654 8999999999
Q ss_pred cEEEeccCCCCCCCCCCceEEEEc-C-CEEEEEcCCCCC--CCCCcEEEEECCCCc------EEecccCCCCCCCCCccE
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHA-N-RYLIVFGGCSHS--IFFNDLHVLDLQTNE------WSQPEIKGDLVTGRAGHA 248 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~-~-~~l~v~GG~~~~--~~~~~i~~~d~~~~~------W~~~~~~~~~p~~r~~~~ 248 (507)
+|+.+.+.+++|.+|.+|++++++ + ++||||||.+.. ...+++++||+.+++ |+.+.. .++.+|.+|+
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~ 601 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQ 601 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCE
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccce
Confidence 999999888889999999987765 2 679999998543 677999999999999 887643 2357899999
Q ss_pred EEEEC-CeEEEEeccCCCC---CcceEEEEECCCCcEEEeccCCCCC----CCCCCCCceEEEEEcCceEEEEEccCC--
Q 010551 249 GITID-ENWYIVGGGDNNN---GCQETIVLNMTKLAWSILTSVKGRN----PLASEGLSVCSAIIEGEHHLVAFGGYN-- 318 (507)
Q Consensus 249 ~~~~~-~~l~v~GG~~~~~---~~~~~~~~d~~~~~W~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~l~v~GG~~-- 318 (507)
+++++ ++|||+||.+... ..+++++||+.+++|+.+. ++... ++.+.+| +++.+.++ .|||+||..
T Consensus 602 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh--~~~~~~~g-~i~v~GGg~~c 677 (695)
T 2zwa_A 602 IKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGF--SLVSTSMG-TIHIIGGGATC 677 (695)
T ss_dssp EEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSC--EEECC----CEEEECCEEEC
T ss_pred EEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee-ccccccCCCCccceee--eEEEeCCC-EEEEEeCCccC
Confidence 99999 9999999986553 4789999999999999653 33221 1233333 34444332 688999843
Q ss_pred ---CCcCceEEEEECCC
Q 010551 319 ---GKYNNEVFVMRLKP 332 (507)
Q Consensus 319 ---~~~~~~~~~~~~~~ 332 (507)
+...+++|.+|+..
T Consensus 678 fsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 678 YGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp TTSCEEECCCEEEEECC
T ss_pred cCccccccceEEEEEEc
Confidence 44567999999754
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.7e-35 Score=316.34 Aligned_cols=254 Identities=19% Similarity=0.207 Sum_probs=210.6
Q ss_pred CCCeEeeCCCCceEEee-c--CCCCCCccccceEEEE--CCEEEEEcCCCCCc-cCCceEEEEccCCceeeeccccccCC
Q 010551 3 SGSWHLELPYDLWVTLP-V--SGARPSPRYKHAAAVF--DQKLYIVGGSRNGR-FLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~-~--~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~~~~~~ 76 (507)
.++|+||+.+++|..++ . .+.+|.+|.+|+++++ +++|||+||..... .++++++||+.+++|+.++.+
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~----- 486 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL----- 486 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC-----
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC-----
Confidence 46899999999999998 3 3568999999999999 99999999977643 789999999999999998754
Q ss_pred CccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEEC---C
Q 010551 77 DKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVG---S 152 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~---~ 152 (507)
|.+|.+|+++++ +++|||+||.+... ++++||+.+++|+.+.+.|.+|.+|.+|++++++ +
T Consensus 487 -----------p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 487 -----------SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp -----------SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred -----------CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 558999999997 99999999987655 7999999999999999877899999999988877 8
Q ss_pred EEEEEcCCCCCC-CccCcEEEEECCCCc------EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCC---CCCcEE
Q 010551 153 RLIIFGGEDRSR-KLLNDVHFLDLETMT------WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---FFNDLH 222 (507)
Q Consensus 153 ~iy~~GG~~~~~-~~~n~~~~~d~~t~~------W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~---~~~~i~ 222 (507)
+||+|||..... ..++++++||+.+++ |+.+.. .++.+|.+|+++++++++|||+||.+... ..++++
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 999999986543 568999999999999 888865 23578999999999857799999986543 688999
Q ss_pred EEECCCCcEEecccCCC----CCCCCCccEEEEECC-eEEEEeccCCC----CCcceEEEEECCC
Q 010551 223 VLDLQTNEWSQPEIKGD----LVTGRAGHAGITIDE-NWYIVGGGDNN----NGCQETIVLNMTK 278 (507)
Q Consensus 223 ~~d~~~~~W~~~~~~~~----~p~~r~~~~~~~~~~-~l~v~GG~~~~----~~~~~~~~~d~~~ 278 (507)
+||+.+++|+.+..... .++.+.+|+++.+++ ++||+||.... ...+++|.+|+..
T Consensus 630 ~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 630 SLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp EEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred EEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 99999999997532211 123578899888876 99999996432 2256788887654
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4.6e-33 Score=297.26 Aligned_cols=323 Identities=11% Similarity=0.047 Sum_probs=230.9
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCc------cCCceEEEEccCCceeeeccccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGR------FLSDVQVFDLRSLAWSNLRLETELD 75 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~------~~~~~~~~d~~~~~W~~~~~~~~~~ 75 (507)
++..|||.+++|..++ ++| |.+|+++++ +++||++||..... ..+.+++||+.+++|+.++.++
T Consensus 167 ~~~~~dp~~~~W~~~~---~~P--~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~--- 238 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTI---DLP--IVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV--- 238 (656)
T ss_dssp CCCCCCTTSCEEEEEE---ECS--SCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE---
T ss_pred ccccCCCCCCeeeeec---cCC--CCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC---
Confidence 4677999999999987 444 466777777 99999999976432 2347999999999999987653
Q ss_pred CCccccCCCcCCCCCccce--eEE-EECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-C
Q 010551 76 ADKTEDSGLLEVLPPMSDH--CMV-KWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-G 151 (507)
Q Consensus 76 ~~~~~~~~~~~~p~~r~~~--~~~-~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~ 151 (507)
.+|..| +++ ..+++||++||.... ++++||+.+++|+.+. +||.+|..|+++++ +
T Consensus 239 -------------~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~d 297 (656)
T 1k3i_A 239 -------------TKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSD 297 (656)
T ss_dssp -------------CSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTT
T ss_pred -------------CCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECC---CCCccccccceEEecC
Confidence 234333 344 358999999997643 5999999999999987 89999999999999 9
Q ss_pred CEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCC----CCCCcEEEEECC
Q 010551 152 SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHS----IFFNDLHVLDLQ 227 (507)
Q Consensus 152 ~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~----~~~~~i~~~d~~ 227 (507)
++||++||........+++++||+.+++|+.+...+..|.++..+.++...++++|+|||.++. ...++++.||+.
T Consensus 298 g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~ 377 (656)
T 1k3i_A 298 GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS 377 (656)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS
T ss_pred CeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecC
Confidence 9999999964444468899999999999999864432232322232333345669999998654 346789999999
Q ss_pred CCcEEecccCCCC----CCCCCccEEEE---ECCeEEEEeccCC---CCCcc---eEEEEECCCCcEEEec--cCCCCCC
Q 010551 228 TNEWSQPEIKGDL----VTGRAGHAGIT---IDENWYIVGGGDN---NNGCQ---ETIVLNMTKLAWSILT--SVKGRNP 292 (507)
Q Consensus 228 ~~~W~~~~~~~~~----p~~r~~~~~~~---~~~~l~v~GG~~~---~~~~~---~~~~~d~~~~~W~~v~--~~~~~~~ 292 (507)
++.|..+...... +.++..++++. ++++|||+||... ...++ .+++||+.++.|..+. .+ |
T Consensus 378 ~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m----p 453 (656)
T 1k3i_A 378 GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL----Y 453 (656)
T ss_dssp TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC----S
T ss_pred CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC----C
Confidence 9998865322211 22344455553 4899999999643 22234 6889999999999986 33 2
Q ss_pred CCCCCCceEEEEEcCceEEEEEccCCC-------CcCceEEEEECCCCCCCCCcccCCchhhhhccc---hhHHHHhhcc
Q 010551 293 LASEGLSVCSAIIEGEHHLVAFGGYNG-------KYNNEVFVMRLKPRDIPRPKIFQSPAAAAAAAS---VTAAYALAKS 362 (507)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~v~GG~~~-------~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 362 (507)
.+ +..++++++.++ .|||+||.+. ...+++++||+..+.|.....++.++....... ...++.++|.
T Consensus 454 ~~--R~~~~~~~l~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 454 FA--RTFHTSVVLPDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SC--CBSCEEEECTTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CC--cccCCeEECCCC-CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 33 344444555333 6899999752 346899999999999988766665554332222 3456666664
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.5e-32 Score=291.54 Aligned_cols=297 Identities=9% Similarity=0.058 Sum_probs=218.0
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccce--EEE-ECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHA--AAV-FDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~--~~~-~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 80 (507)
.+|+||+.+++|..++ .+|.+|..|+ +++ .+++||++||.... ++++||+.+++|..++.+
T Consensus 220 ~~~~yd~~t~~w~~~~---~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~--------- 283 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRT---VTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDM--------- 283 (656)
T ss_dssp EEEEECTTTCCBCCCE---EEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCC---------
T ss_pred EEEEEeCCCCcEEeCc---ccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCC---------
Confidence 4799999999999998 5666766553 444 48999999997643 799999999999998755
Q ss_pred cCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCC--CCCCCCcCcEEEEECCEEEEE
Q 010551 81 DSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSG--KVPVTRGGHSVTLVGSRLIIF 157 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g--~~p~~r~~~~~~~~~~~iy~~ 157 (507)
|.+|.+|+++++ +++||++||........+++++||+.+++|+.+...+ +++.++.. +++..++++|+|
T Consensus 284 -------~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~ 355 (656)
T 1k3i_A 284 -------QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLF 355 (656)
T ss_dssp -------SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEE
T ss_pred -------CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEE
Confidence 457999999999 9999999996444445788999999999999985332 34455443 555678999999
Q ss_pred cCCCCCC---CccCcEEEEECCCCcEEEeccCCCC----CCCCCCceEEEE--cCCEEEEEcCCCC---CCCCC---cEE
Q 010551 158 GGEDRSR---KLLNDVHFLDLETMTWDAVEVTQTP----PAPRYDHSAALH--ANRYLIVFGGCSH---SIFFN---DLH 222 (507)
Q Consensus 158 GG~~~~~---~~~n~~~~~d~~t~~W~~~~~~~~~----p~~r~~~~~~~~--~~~~l~v~GG~~~---~~~~~---~i~ 222 (507)
||.++.. ...++++.||+.++.|......... +.++..++++++ .+++|||+||... ....+ .++
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 9986431 2367899999999998765432111 223445555543 3678999999642 23444 788
Q ss_pred EEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCC------CCCcceEEEEECCCCcEEEeccCCCCCCCCC
Q 010551 223 VLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDN------NNGCQETIVLNMTKLAWSILTSVKGRNPLAS 295 (507)
Q Consensus 223 ~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~------~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~ 295 (507)
+||+.++.|..+. .+++|.+|..|+++++ +++|||+||.+. ....+++++||+.+++|+.+..++ .+|
T Consensus 436 ~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~----~~R 510 (656)
T 1k3i_A 436 LGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS----IVR 510 (656)
T ss_dssp CCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS----SCC
T ss_pred cCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC----Ccc
Confidence 9999999999874 2588999999999888 899999999653 233678999999999999987653 344
Q ss_pred CCCceEEEEEcCceEEEEEccCC-CC---cCceEEEEECC
Q 010551 296 EGLSVCSAIIEGEHHLVAFGGYN-GK---YNNEVFVMRLK 331 (507)
Q Consensus 296 ~~~~~~~~~~~~~~~l~v~GG~~-~~---~~~~~~~~~~~ 331 (507)
..|+. +++..+..|||+||.. +. ..-++.+|.+.
T Consensus 511 ~~hs~--a~ll~dg~v~v~GG~~~~~~~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 511 VYHSI--SLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPN 548 (656)
T ss_dssp CTTEE--EEECTTSCEEEEECCCCTTCSCCCCEEEEEECG
T ss_pred ccccH--hhcCCCcEEEecCCCCCCCCCCCeeEEEEEeCh
Confidence 45543 3442233689999853 22 22345666653
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.69 E-value=3.1e-05 Score=74.55 Aligned_cols=273 Identities=8% Similarity=-0.062 Sum_probs=156.3
Q ss_pred CCCCeEeeCCCCceEEeecC--CCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCcee-eeccccccCCCc
Q 010551 2 DSGSWHLELPYDLWVTLPVS--GARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWS-NLRLETELDADK 78 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~--~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~~~~~ 78 (507)
+.++-+||+.+.++..--.. ...+.....+.++..++++|+.... .+.+.++|+.+++-. .++..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~------- 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGF------- 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECC-------
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCC-------
Confidence 45677889998887642100 0234445556777789999998752 357999999987763 33211
Q ss_pred cccCCCcCCCCCccceeEEE-ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCC-CcCcEEEEECCEEEE
Q 010551 79 TEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVT-RGGHSVTLVGSRLII 156 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~-r~~~~~~~~~~~iy~ 156 (507)
..-+.++. -++++|+.... ...+.++|+.+++-......|..... ..-..++..++++|+
T Consensus 84 ------------~~p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv 145 (328)
T 3dsm_A 84 ------------TSPRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYV 145 (328)
T ss_dssp ------------SSEEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEE
T ss_pred ------------CCCcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEE
Confidence 11233444 67899998642 34699999999986543332331100 011233346889998
Q ss_pred EcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCC-----CCcEEEEECCCCcE
Q 010551 157 FGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIF-----FNDLHVLDLQTNEW 231 (507)
Q Consensus 157 ~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~-----~~~i~~~d~~~~~W 231 (507)
..-. ..+.+.++|+.+++....-..+..| +.++...++.+|+......... .+.++++|+.+++.
T Consensus 146 ~~~~-----~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 146 NCWS-----YQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp EECT-----TCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred EcCC-----CCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 7421 1357999999998865443222222 3344445677777654321111 36799999999876
Q ss_pred EecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEc-Cc
Q 010551 232 SQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GE 308 (507)
Q Consensus 232 ~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 308 (507)
...- ..|.......++.. ++.+|+..+ .++++|+.+.+.......+. .+.....+.++ .+
T Consensus 216 ~~~~---~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~------~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 216 EKQF---KFKLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFLEF------RDTKYYGLTVNPNN 278 (328)
T ss_dssp EEEE---ECCTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSBCC------CSSCEEEEEECTTT
T ss_pred EEEE---ecCCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeeecC------CCCceEEEEEcCCC
Confidence 6421 11212223344444 457777633 68999998876421111111 01222333444 35
Q ss_pred eEEEEEccCCCCcCceEEEEECC
Q 010551 309 HHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 309 ~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
..|||....+....+.+++||+.
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT
T ss_pred CeEEEEcccccccCCEEEEECCC
Confidence 67888763222235789999986
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=0.00018 Score=65.15 Aligned_cols=206 Identities=16% Similarity=0.018 Sum_probs=131.0
Q ss_pred CccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCc
Q 010551 90 PMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 90 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~ 169 (507)
.-+-+++...++.||+-.|..+. +.+.++|+.|++-..-. ++|....+..++..+++||+.... .+.
T Consensus 20 ~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw~------~~~ 86 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTWR------NHE 86 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------SSE
T ss_pred ccccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEee------CCE
Confidence 34556778889999999887653 45999999999876654 556666777788889999998654 467
Q ss_pred EEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-cccCCCCCCCC-Ccc
Q 010551 170 VHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGR-AGH 247 (507)
Q Consensus 170 ~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r-~~~ 247 (507)
+++||+.+.+-..-- +.+..+.+++ .+++.||+.-| .+.++.+|+.+.+-.. +.+ +..+.+. .--
T Consensus 87 v~v~D~~tl~~~~ti-----~~~~~Gwglt-~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V-~~~g~~~~~lN 153 (243)
T 3mbr_X 87 GFVYDLATLTPRARF-----RYPGEGWALT-SDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKV-TAGGRPLDNLN 153 (243)
T ss_dssp EEEEETTTTEEEEEE-----ECSSCCCEEE-ECSSCEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEE
T ss_pred EEEEECCcCcEEEEE-----eCCCCceEEe-eCCCEEEEECC------CCeEEEEeCCCCeEEEEEEE-ccCCcccccce
Confidence 999999987754332 1223445554 45666888654 3579999999977544 222 2222221 222
Q ss_pred EEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCC-----CCCCceE-EEEEcCceEEEEEccCCCCc
Q 010551 248 AGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLA-----SEGLSVC-SAIIEGEHHLVAFGGYNGKY 321 (507)
Q Consensus 248 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~-----~~~~~~~-~~~~~~~~~l~v~GG~~~~~ 321 (507)
-+..+++++|+--- ..+++.++|+.++.-...-++.+..+.. ....... .+..+..+.|||.|- .
T Consensus 154 eLe~~~G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK----~ 224 (243)
T 3mbr_X 154 ELEWVNGELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK----R 224 (243)
T ss_dssp EEEEETTEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET----T
T ss_pred eeEEeCCEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC----C
Confidence 34556888885531 2458999999998755544443322111 1222333 334445678999875 3
Q ss_pred CceEEEEEC
Q 010551 322 NNEVFVMRL 330 (507)
Q Consensus 322 ~~~~~~~~~ 330 (507)
...+|...+
T Consensus 225 wp~~~~v~~ 233 (243)
T 3mbr_X 225 WPMLYEIRL 233 (243)
T ss_dssp CSEEEEEEE
T ss_pred CCcEEEEEE
Confidence 566666655
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.29 E-value=0.0029 Score=60.49 Aligned_cols=234 Identities=9% Similarity=-0.003 Sum_probs=134.6
Q ss_pred CCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEE
Q 010551 52 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 131 (507)
Q Consensus 52 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 131 (507)
-+.+..||+.+++....-.... ...+.....+.++..++++|+.... .+.+.++|+.|++-..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~-----------n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~ 78 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRA-----------NGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVG 78 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHH-----------HSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCEEhhhhHhhh-----------cCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEE
Confidence 4679999999998765321110 0112334456677789999998753 3469999999998643
Q ss_pred eecCCCCCCCCcCcEEEE-ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC-CCCCceEEEEcCCEEEEE
Q 010551 132 METSGKVPVTRGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA-PRYDHSAALHANRYLIVF 209 (507)
Q Consensus 132 ~~~~g~~p~~r~~~~~~~-~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~l~v~ 209 (507)
.-+.+ .. -+.++. -++++|+.... .+.+.++|+.+++-...-..+.... ...-+.++. .++++||.
T Consensus 79 ~i~~~--~~---p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~ 146 (328)
T 3dsm_A 79 RITGF--TS---PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVN 146 (328)
T ss_dssp EEECC--SS---EEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEE
T ss_pred EcCCC--CC---CcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEE
Confidence 22211 11 123333 57799887643 3579999999987553222222000 002223444 67779887
Q ss_pred cCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCC-----cceEEEEECCCCcEEE
Q 010551 210 GGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNG-----CQETIVLNMTKLAWSI 283 (507)
Q Consensus 210 GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~-----~~~~~~~d~~~~~W~~ 283 (507)
.-. ..+.+.++|+.+++....-..+..| +.++.. ++++|+......... .+.++++|+.+.+...
T Consensus 147 ~~~----~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 147 CWS----YQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp ECT----TCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred cCC----CCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 421 1357999999998765432122222 223333 467777754321111 2579999999887654
Q ss_pred eccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCCCC
Q 010551 284 LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 336 (507)
Q Consensus 284 v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w~ 336 (507)
...++.. ......++.+.+..||+..+ .++.+|+......
T Consensus 218 ~~~~~~g------~~p~~la~~~d~~~lyv~~~-------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 218 QFKFKLG------DWPSEVQLNGTRDTLYWINN-------DIWRMPVEADRVP 257 (328)
T ss_dssp EEECCTT------CCCEEEEECTTSCEEEEESS-------SEEEEETTCSSCC
T ss_pred EEecCCC------CCceeEEEecCCCEEEEEcc-------EEEEEECCCCcee
Confidence 3223211 11233334444568888643 7899999766543
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.22 E-value=0.00046 Score=62.43 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=106.3
Q ss_pred cccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEe
Q 010551 28 RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 107 (507)
Q Consensus 28 r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~G 107 (507)
-+-+.+...++.||+-.|..+ .+.+..+|+.+++=...... +..-.+.+++..+++||+..
T Consensus 21 ~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l----------------~~~~fgeGi~~~~~~ly~lt 81 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEV----------------PPPYFGAGIVAWRDRLIQLT 81 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEEC----------------CTTCCEEEEEEETTEEEEEE
T ss_pred cccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeC----------------CCCcceeEEEEeCCEEEEEE
Confidence 344467777999999998543 35799999999876554332 22346678888999999985
Q ss_pred ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEE-EeccC
Q 010551 108 GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-AVEVT 186 (507)
Q Consensus 108 G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~-~~~~~ 186 (507)
.. .+.+++||+.|.+-..--+ .+..+.+++.-+++||+.-| .+.++.+|+.+.+-. .+...
T Consensus 82 w~------~~~v~v~D~~tl~~~~ti~-----~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 82 WR------NHEGFVYDLATLTPRARFR-----YPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp SS------SSEEEEEETTTTEEEEEEE-----CSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECE
T ss_pred ee------CCEEEEEECCcCcEEEEEe-----CCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEc
Confidence 43 4569999999987544322 22356677766778888655 346999999998743 33332
Q ss_pred CCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 187 QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 187 ~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
..+.+...-......++.+|+-- ...++|.+.|+.+++-..
T Consensus 144 -~~g~~~~~lNeLe~~~G~lyanv-----w~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 144 -AGGRPLDNLNELEWVNGELLANV-----WLTSRIARIDPASGKVVA 184 (243)
T ss_dssp -ETTEECCCEEEEEEETTEEEEEE-----TTTTEEEEECTTTCBEEE
T ss_pred -cCCcccccceeeEEeCCEEEEEE-----CCCCeEEEEECCCCCEEE
Confidence 22222222222222366677632 235789999999987543
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.08 E-value=0.0008 Score=61.41 Aligned_cols=203 Identities=11% Similarity=-0.002 Sum_probs=124.1
Q ss_pred ceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEE
Q 010551 93 DHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 93 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~ 172 (507)
..++...++.||+-.|..+ .+.+.++|+.|++-..-. +++....+..++..+++||+.... .+.+++
T Consensus 45 tqGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g~~ly~ltw~------~~~v~v 111 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQI---ELGKRYFGEGISDWKDKIVGLTWK------NGLGFV 111 (262)
T ss_dssp EEEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------SSEEEE
T ss_pred cceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEE---ecCCccceeEEEEeCCEEEEEEee------CCEEEE
Confidence 3556666899999988654 345999999999866544 455555666778889999998653 357999
Q ss_pred EECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-cccCCCCCCCCCc-cEEE
Q 010551 173 LDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAG-HAGI 250 (507)
Q Consensus 173 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~-~~~~ 250 (507)
||+.+.+-..--. .+-.+.+++ .+++.+|+.-| .+.++.+|+.+.+-.. +.+ +....+... --+.
T Consensus 112 ~D~~t~~~~~ti~-----~~~eG~glt-~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V-~~~g~~~~~lNELe 178 (262)
T 3nol_A 112 WNIRNLRQVRSFN-----YDGEGWGLT-HNDQYLIMSDG------TPVLRFLDPESLTPVRTITV-TAHGEELPELNELE 178 (262)
T ss_dssp EETTTCCEEEEEE-----CSSCCCCEE-ECSSCEEECCS------SSEEEEECTTTCSEEEEEEC-EETTEECCCEEEEE
T ss_pred EECccCcEEEEEE-----CCCCceEEe-cCCCEEEEECC------CCeEEEEcCCCCeEEEEEEe-ccCCccccccceeE
Confidence 9999877543221 122444444 45666888544 3579999999877544 222 111111111 1244
Q ss_pred EECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCC----CCCCCce-EEEEEcCceEEEEEccCCCCcCceE
Q 010551 251 TIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPL----ASEGLSV-CSAIIEGEHHLVAFGGYNGKYNNEV 325 (507)
Q Consensus 251 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~----~~~~~~~-~~~~~~~~~~l~v~GG~~~~~~~~~ 325 (507)
..++++|+--- ..+++.++|+.+..-...-++++..+. ....... ..+..+..+.|||.|-. ...+
T Consensus 179 ~~~G~lyan~w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~----Wp~~ 249 (262)
T 3nol_A 179 WVDGEIFANVW-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL----WPKV 249 (262)
T ss_dssp EETTEEEEEET-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT----CSEE
T ss_pred EECCEEEEEEc-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC----CCce
Confidence 55888886421 245799999999876554444432211 1112223 33444556789998753 4556
Q ss_pred EEEEC
Q 010551 326 FVMRL 330 (507)
Q Consensus 326 ~~~~~ 330 (507)
|...+
T Consensus 250 ~ev~~ 254 (262)
T 3nol_A 250 FEITL 254 (262)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 24
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.01 E-value=0.0092 Score=59.42 Aligned_cols=199 Identities=16% Similarity=0.196 Sum_probs=109.4
Q ss_pred EEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEEC
Q 010551 96 MVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 96 ~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~ 175 (507)
++..++..++.|+.+. .+.+||+.++.-.... ........++.+++..++.|+.++ .+.+||+
T Consensus 244 ~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~d~------~i~i~d~ 306 (445)
T 2ovr_B 244 CVQYDGRRVVSGAYDF------MVKVWDPETETCLHTL-----QGHTNRVYSLQFDGIHVVSGSLDT------SIRVWDV 306 (445)
T ss_dssp EEEECSSCEEEEETTS------CEEEEEGGGTEEEEEE-----CCCSSCEEEEEECSSEEEEEETTS------CEEEEET
T ss_pred EEEECCCEEEEEcCCC------EEEEEECCCCcEeEEe-----cCCCCceEEEEECCCEEEEEeCCC------eEEEEEC
Confidence 3444677777776532 3888998877533222 111122334445777777777653 5899999
Q ss_pred CCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCe
Q 010551 176 ETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDEN 255 (507)
Q Consensus 176 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 255 (507)
.+.+-...-. ...........+++ +++.|+.+ +.+.+||+.++.-...- .+.. .....-..+..++.
T Consensus 307 ~~~~~~~~~~-----~~~~~v~~~~~~~~-~l~~~~~d-----g~i~vwd~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~ 373 (445)
T 2ovr_B 307 ETGNCIHTLT-----GHQSLTSGMELKDN-ILVSGNAD-----STVKIWDIKTGQCLQTL-QGPN-KHQSAVTCLQFNKN 373 (445)
T ss_dssp TTCCEEEEEC-----CCCSCEEEEEEETT-EEEEEETT-----SCEEEEETTTCCEEEEE-CSTT-SCSSCEEEEEECSS
T ss_pred CCCCEEEEEc-----CCcccEEEEEEeCC-EEEEEeCC-----CeEEEEECCCCcEEEEE-ccCC-CCCCCEEEEEECCC
Confidence 8876433211 11112233344555 56666644 36889999876643321 1111 11222233445677
Q ss_pred EEEEeccCCCCCcceEEEEECCCCcEEE-eccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 256 WYIVGGGDNNNGCQETIVLNMTKLAWSI-LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~~~~W~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
+++.|+.++ .+.+||+.+..... +...... .. ......+...++..++++|+.++.....++++|+...
T Consensus 374 ~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~---~~-~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 374 FVITSSDDG-----TVKLWDLKTGEFIRNLVTLESG---GS-GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEETTS-----EEEEEETTTCCEEEEEEECTTG---GG-TCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEEeCCC-----eEEEEECCCCceeeeeeccccC---CC-CceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 777777443 57899988876443 2111100 00 1122334455566778889888776778888888643
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.97 E-value=0.0011 Score=60.58 Aligned_cols=159 Identities=14% Similarity=0.030 Sum_probs=101.0
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccC
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY 110 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 110 (507)
..+...++.||+-.|..+ .+.+.++|+.+++=...... ++.-++.+++..+++||+....
T Consensus 46 qGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l----------------~~~~FgeGit~~g~~ly~ltw~- 105 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIEL----------------GKRYFGEGISDWKDKIVGLTWK- 105 (262)
T ss_dssp EEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEEC----------------CTTCCEEEEEEETTEEEEEESS-
T ss_pred ceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEec----------------CCccceeEEEEeCCEEEEEEee-
Confidence 455555889999988443 25789999999875443322 2234567788899999999542
Q ss_pred CCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEE-EeccCCCC
Q 010551 111 KKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-AVEVTQTP 189 (507)
Q Consensus 111 ~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~-~~~~~~~~ 189 (507)
.+.+++||+.|.+-..--+ .+-.+..++.-++.||+.-| .+.++.+|+.+.+-. .+... ..
T Consensus 106 -----~~~v~v~D~~t~~~~~ti~-----~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~-~~ 167 (262)
T 3nol_A 106 -----NGLGFVWNIRNLRQVRSFN-----YDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVT-AH 167 (262)
T ss_dssp -----SSEEEEEETTTCCEEEEEE-----CSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECE-ET
T ss_pred -----CCEEEEEECccCcEEEEEE-----CCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEec-cC
Confidence 4569999999987543321 12255666666678888654 356999999987643 33331 11
Q ss_pred CCCCCCc-eEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 190 PAPRYDH-SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 190 p~~r~~~-~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
..+...- -+... ++.||+-- ...++|.+.|+.+++-..
T Consensus 168 g~~~~~lNELe~~-~G~lyan~-----w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 168 GEELPELNELEWV-DGEIFANV-----WQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp TEECCCEEEEEEE-TTEEEEEE-----TTSSEEEEECTTTCBEEE
T ss_pred CccccccceeEEE-CCEEEEEE-----ccCCeEEEEECCCCcEEE
Confidence 1111111 13334 56688622 235789999999987544
No 26
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.97 E-value=0.00098 Score=66.12 Aligned_cols=270 Identities=10% Similarity=-0.062 Sum_probs=136.0
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.+|.+|+....+..+.. .+.+...++++.. ++.+++.++.+ ..+.++|+.++...........
T Consensus 102 ~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~-------- 165 (433)
T 3bws_A 102 KLIALDKEGITHRFISR---FKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKY-------- 165 (433)
T ss_dssp CEEECCBTTCSEEEEEE---EECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHH--------
T ss_pred EEEEECCCCCcceEEEE---EcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccc--------
Confidence 67888887776665542 2222222223322 67888877643 3599999998876543322100
Q ss_pred CCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEc
Q 010551 83 GLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFG 158 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~G 158 (507)
.........+.+ ++.+|+.|+.+ ..+.+||+.+++...... .....-.+++.. +..+|+.+
T Consensus 166 -----~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 166 -----KKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVD----LTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp -----HTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEE----CSSSSEEEEEEETTTTEEEEEE
T ss_pred -----cccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEc----CCCCCeeEEEEcCCCCEEEEEe
Confidence 001111222333 67888887643 359999998876543321 011111222332 34676666
Q ss_pred CCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCC---CCCcEEEEECCCCcEEecc
Q 010551 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---FFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 159 G~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~---~~~~i~~~d~~~~~W~~~~ 235 (507)
+.+ +.+.+||+.+.+....-.. .....+++...++..+++++..... .-..+++||+.+++.....
T Consensus 231 ~~~------~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 231 WIS------EDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp TTT------TEEEEEETTTTEEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred cCC------CcEEEEECCCCcEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec
Confidence 543 3699999988876443221 1112233333344344444432221 1246999999887654431
Q ss_pred cCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEE
Q 010551 236 IKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVA 313 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 313 (507)
. .+.....++.. ++.+|+.++.+ ..+.+||+.+..-....... ......+..+.+..|++
T Consensus 300 ~-----~~~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 300 G-----PPGNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSIPVF--------DKPNTIALSPDGKYLYV 361 (433)
T ss_dssp E-----EEECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEEECS--------SSEEEEEECTTSSEEEE
T ss_pred c-----CCCCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEecCC--------CCCCeEEEcCCCCEEEE
Confidence 1 01111122222 23577776533 36889999876543322111 11122333344445665
Q ss_pred EccCCC----------CcCceEEEEECCCC
Q 010551 314 FGGYNG----------KYNNEVFVMRLKPR 333 (507)
Q Consensus 314 ~GG~~~----------~~~~~~~~~~~~~~ 333 (507)
.+...+ .....++++|+...
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EecCCCccccccccccccceEEEEEECCCC
Confidence 443221 11347899998654
No 27
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.90 E-value=0.0077 Score=55.39 Aligned_cols=206 Identities=13% Similarity=-0.025 Sum_probs=122.2
Q ss_pred eeEEEEC-CEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEE
Q 010551 94 HCMVKWG-TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 94 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~ 172 (507)
++++..+ +.||+..|... .+.+.++|+.|++=..-. +++....+..++..+++||+..-. .+.+++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i---~l~~~~fgeGi~~~g~~lyv~t~~------~~~v~v 90 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIH---KMDDSYFGEGLTLLNEKLYQVVWL------KNIGFI 90 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEETT------CSEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEE---ecCCCcceEEEEEeCCEEEEEEec------CCEEEE
Confidence 6666665 79999877532 346999999999865543 233334445667778899998653 457999
Q ss_pred EECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-cccCCCCCCCC-CccEEE
Q 010551 173 LDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGR-AGHAGI 250 (507)
Q Consensus 173 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r-~~~~~~ 250 (507)
||+.+.+=..--+.+ .| .+.+ ...+++.+|+.-| .+.++.+|+.+.+-.. +.. +..+.+. ....+.
T Consensus 91 iD~~t~~v~~~i~~g-~~---~g~g-lt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~V-g~~~~p~~~~nele 158 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ-MK---DGWG-LATDGKILYGSDG------TSILYEIDPHTFKLIKKHNV-KYNGHRVIRLNELE 158 (266)
T ss_dssp EETTTTEEEEEEECC-SS---SCCE-EEECSSSEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEE
T ss_pred EECCCCcEEEEEECC-CC---CeEE-EEECCCEEEEECC------CCeEEEEECCCCcEEEEEEE-CCCCcccccceeEE
Confidence 999987543322112 12 2333 3345667888654 3689999999876543 222 2222221 122344
Q ss_pred EECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCC------CCCCCCCceEEEEEcCceEEEEEccCCCCcCce
Q 010551 251 TIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN------PLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNE 324 (507)
Q Consensus 251 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 324 (507)
..++.+|+--. ..+++.++|+.+++-...-++++.. ..+........+..++.+.+||.|+. .+.
T Consensus 159 ~~dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~----~~~ 229 (266)
T 2iwa_A 159 YINGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL----WPK 229 (266)
T ss_dssp EETTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT----CSE
T ss_pred EECCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC----CCe
Confidence 45778886632 2357999999998654333332110 00111122334445556789998874 467
Q ss_pred EEEEECCCC
Q 010551 325 VFVMRLKPR 333 (507)
Q Consensus 325 ~~~~~~~~~ 333 (507)
++..++...
T Consensus 230 v~~i~l~~~ 238 (266)
T 2iwa_A 230 LFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 788777544
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.89 E-value=0.021 Score=55.39 Aligned_cols=213 Identities=12% Similarity=0.082 Sum_probs=119.7
Q ss_pred CCCCeEeeCCCC--ceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCC
Q 010551 2 DSGSWHLELPYD--LWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDAD 77 (507)
Q Consensus 2 ~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~ 77 (507)
|..+++||+.+. .|..-... ....+.++.++.||+..+ ...++.||+.+++ |+......
T Consensus 112 ~g~l~a~d~~tG~~~W~~~~~~------~~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~----- 174 (376)
T 3q7m_A 112 KAQVYALNTSDGTVAWQTKVAG------EALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMP----- 174 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECSS------CCCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC------
T ss_pred CCEEEEEECCCCCEEEEEeCCC------ceEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCC-----
Confidence 345788998766 57654321 112233455888887543 2369999998875 76543211
Q ss_pred ccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCC--------cCcEE
Q 010551 78 KTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTR--------GGHSV 147 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r--------~~~~~ 147 (507)
....+...+.+..++.||+ |.. ...++.||+.+++ |+... ..|... .....
T Consensus 175 ---------~~~~~~~~~~~~~~~~v~~-g~~------~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~~~p 235 (376)
T 3q7m_A 175 ---------SLSLRGESAPTTAFGAAVV-GGD------NGRVSAVLMEQGQMIWQQRI---SQATGSTEIDRLSDVDTTP 235 (376)
T ss_dssp -------------CCCCCCEEETTEEEE-CCT------TTEEEEEETTTCCEEEEEEC---CC-----------CCCCCC
T ss_pred ---------ceeecCCCCcEEECCEEEE-EcC------CCEEEEEECCCCcEEEEEec---ccCCCCcccccccccCCCc
Confidence 0111222344555777776 321 2359999998875 76543 112111 12233
Q ss_pred EEECCEEEEEcCCCCCCCccCcEEEEECCCCc--EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEE
Q 010551 148 TLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLD 225 (507)
Q Consensus 148 ~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d 225 (507)
+..++.+|+.+. ...++.||+.+++ |..... ......+.++.+|+.... ..++.||
T Consensus 236 ~~~~~~v~~~~~-------~g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~~~------g~l~~~d 293 (376)
T 3q7m_A 236 VVVNGVVFALAY-------NGNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVDQN------DRVMALT 293 (376)
T ss_dssp EEETTEEEEECT-------TSCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEETT------CCEEEEE
T ss_pred EEECCEEEEEec-------CcEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEcCC------CeEEEEE
Confidence 455778877542 2358999998774 764321 122334457768876432 3699999
Q ss_pred CCCCc--EEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCc--EEE
Q 010551 226 LQTNE--WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA--WSI 283 (507)
Q Consensus 226 ~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~--W~~ 283 (507)
+.+++ |.... . ..+...+.++.++.+|+... ...++.||+.+.. |+.
T Consensus 294 ~~tG~~~w~~~~----~-~~~~~~~~~~~~~~l~v~~~------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 294 IDGGVTLWTQSD----L-LHRLLTSPVLYNGNLVVGDS------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TTTCCEEEEECT----T-TTSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEeecc----c-CCCcccCCEEECCEEEEEeC------CCeEEEEECCCCcEEEEE
Confidence 98876 76531 1 11223344556778777532 1258899988875 543
No 29
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.87 E-value=0.0015 Score=59.69 Aligned_cols=156 Identities=11% Similarity=0.028 Sum_probs=100.7
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccC
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY 110 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 110 (507)
..+...++.||+..|..+. +.++|+.+++=.... .. ..-++.+++..+++||+....
T Consensus 58 qGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~-l~----------------~~~FgeGit~~g~~Ly~ltw~- 114 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME-RL----------------GNIFAEGLASDGERLYQLTWT- 114 (268)
T ss_dssp EEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE-EC----------------TTCCEEEEEECSSCEEEEESS-
T ss_pred ceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE-CC----------------CCcceeEEEEeCCEEEEEEcc-
Confidence 4556668999999985432 889999988654332 21 234566788889999998542
Q ss_pred CCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEE-eccCCCC
Q 010551 111 KKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDA-VEVTQTP 189 (507)
Q Consensus 111 ~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~-~~~~~~~ 189 (507)
.+.+++||+.|.+-..--+ .+-.+.+++.-+..||+.-| .+.++.+|+.+.+-.. +... ..
T Consensus 115 -----~~~v~V~D~~Tl~~~~ti~-----~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~-~~ 176 (268)
T 3nok_A 115 -----EGLLFTWSGMPPQRERTTR-----YSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVK-LR 176 (268)
T ss_dssp -----SCEEEEEETTTTEEEEEEE-----CSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECE-ET
T ss_pred -----CCEEEEEECCcCcEEEEEe-----CCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeC-CC
Confidence 4469999999987554321 12345677777889999765 3479999999976443 3322 22
Q ss_pred CCCCCCce-EEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 190 PAPRYDHS-AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 190 p~~r~~~~-~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
+.+...-. +... ++.||+- ....++|.+.|+.+++-..
T Consensus 177 g~~v~~lNeLe~~-dG~lyan-----vw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYAN-----IWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEE-----ETTCSEEEEECTTTCBEEE
T ss_pred CcccccccccEEe-CCEEEEE-----ECCCCeEEEEeCCCCcEEE
Confidence 22221111 2333 5667762 2235689999999987543
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.85 E-value=0.0055 Score=56.40 Aligned_cols=202 Identities=10% Similarity=-0.085 Sum_probs=117.8
Q ss_pred cceEEEEC-CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEec
Q 010551 30 KHAAAVFD-QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGG 108 (507)
Q Consensus 30 ~~~~~~~~-~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG 108 (507)
-|.+++.+ +.||+..|.. ..+.+.++|+.+++=...-..+ ....+.+++..+++||+..-
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~----------------~~~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLY---GRSSVRQVALQTGKVENIHKMD----------------DSYFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEEECSTTEEEEEECST---TTCEEEEEETTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEET
T ss_pred cccEEEeCCCeEEEECCCC---CCCEEEEEECCCCCEEEEEecC----------------CCcceEEEEEeCCEEEEEEe
Confidence 46666665 8999987732 1367999999998754432221 12345677888999999854
Q ss_pred cCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCC
Q 010551 109 HYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 188 (507)
Q Consensus 109 ~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~ 188 (507)
. .+.+++||+.|.+=..--+.| +| .+..++.-++++|+.-| .+.++.+|+.+.+-..--..+.
T Consensus 84 ~------~~~v~viD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 84 L------KNIGFIYDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp T------CSEEEEEETTTTEEEEEEECC-SS---SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEE
T ss_pred c------CCEEEEEECCCCcEEEEEECC-CC---CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECC
Confidence 2 456999999988644332222 22 33445555668888654 4579999999977433322222
Q ss_pred CCCCCCC-ceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-cccCCC--------CCCCCCccEEEEE--CCeE
Q 010551 189 PPAPRYD-HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGD--------LVTGRAGHAGITI--DENW 256 (507)
Q Consensus 189 ~p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~--------~p~~r~~~~~~~~--~~~l 256 (507)
.+.+... ..+... ++.+|+--. ..+.+.+.|+.+++-.. +...+. .+..-.-.+++.. ++++
T Consensus 147 ~~~p~~~~nele~~-dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred CCcccccceeEEEE-CCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 1222211 233334 667886432 24689999999987443 111110 1111122344444 4589
Q ss_pred EEEeccCCCCCcceEEEEECCC
Q 010551 257 YIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 257 ~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
||.|+.. +.+++.++..
T Consensus 221 fVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 221 FVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp EEEETTC-----SEEEEEEEEE
T ss_pred EEECCCC-----CeEEEEEEec
Confidence 9988743 3567766543
No 31
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.79 E-value=0.02 Score=54.52 Aligned_cols=229 Identities=12% Similarity=0.041 Sum_probs=115.9
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
.++++|+.+.+-...-..+ ...+.+++. ++.+|+.++.+ +.+.+||+.++.-...-..... ..
T Consensus 70 ~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-~~---- 134 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND-----LKPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDR-KR---- 134 (353)
T ss_dssp EEEEECTTTCCEEEEEEES-----SCCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCC-CC----
T ss_pred cEEEEcCCCCeEEEEEecC-----CCcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCC-cc----
Confidence 4788888887655443211 112334433 45688776532 4799999988765332222110 00
Q ss_pred CCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeec-CCCCCCCCcCcEEEEE--CCEEEE
Q 010551 82 SGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMET-SGKVPVTRGGHSVTLV--GSRLII 156 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~g~~p~~r~~~~~~~~--~~~iy~ 156 (507)
.....+..-++++.. ++.+|+.+... ...+++||+.+++-....+ .+.. -+.++.. ++.+|+
T Consensus 135 ---~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~ 201 (353)
T 3vgz_A 135 ---TEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGKM-----STGLALDSEGKRLYT 201 (353)
T ss_dssp ---CSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCTT-----CCCCEEETTTTEEEE
T ss_pred ---ccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCCc-----cceEEECCCCCEEEE
Confidence 000001111223332 45677766322 2359999999887544332 1111 1222222 346666
Q ss_pred EcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecc
Q 010551 157 FGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 157 ~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
... .+.+++||+.+.+-......+.........+++.. +++.+|+.+.. .+.+++||+.+++.....
T Consensus 202 ~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 202 TNA-------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp ECT-------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEE
T ss_pred EcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEE
Confidence 543 24688999988764433222111111111223333 35557665432 257999999888765432
Q ss_pred cCCCCCCCCCccEEEEE-C-CeEEEEeccCCCCCcceEEEEECCCCcEEE
Q 010551 236 IKGDLVTGRAGHAGITI-D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
.. +.+ ..++.. + +.+|+.+..+ ..+.++|+.+.....
T Consensus 270 ~~---~~~---~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 270 AA---PES---LAVLFNPARNEAYVTHRQA-----GKVSVIDAKSYKVVK 308 (353)
T ss_dssp EC---SSC---CCEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred Ec---CCC---ceEEECCCCCEEEEEECCC-----CeEEEEECCCCeEEE
Confidence 11 122 123333 3 4577765422 368899998876544
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.69 E-value=0.0056 Score=59.61 Aligned_cols=257 Identities=13% Similarity=0.051 Sum_probs=133.3
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~ 79 (507)
|..++++|+.+.+-...-.. . ..-++++.. +..||+.|+.+ ..+.++|+.++.........
T Consensus 11 d~~v~v~d~~~~~~~~~~~~---~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~------- 73 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPV---G--SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPAG------- 73 (391)
T ss_dssp TTEEEEEETTTTEEEEEEEC---S--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECS-------
T ss_pred CCEEEEEECCCCeEEEEeec---C--CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEECC-------
Confidence 45678889888765544321 1 112333333 44677777532 46999999887654433221
Q ss_pred ccCCCcCCCCCccceeEEEE---CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEE
Q 010551 80 EDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRL 154 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~i 154 (507)
. ....+.+ ++.||+.|.. ...+.+||+.+++-......+ ..-.+++.. +..+
T Consensus 74 -----------~-~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 74 -----------S-SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTG-----KSPLGLALSPDGKKL 130 (391)
T ss_dssp -----------S-SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEE
T ss_pred -----------C-CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCC-----CCcceEEECCCCCEE
Confidence 1 1222233 4456666542 235999999998765443211 111222222 2367
Q ss_pred EEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 155 IIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 155 y~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
|+.++.+ +.+++||+.+.+....-..+.. ...++... ++.+|+.++.+ +.+++||+.++....
T Consensus 131 ~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 131 YVTNNGD------KTVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVID 194 (391)
T ss_dssp EEEETTT------TEEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred EEEeCCC------CEEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEE
Confidence 6776543 4699999998876555332211 12333333 45566665543 469999998876554
Q ss_pred cccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEE
Q 010551 234 PEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLV 312 (507)
Q Consensus 234 ~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (507)
.... .....+++.. ++..+++++... ....+.+||+.+..-... ++.. ....+....+.+..|+
T Consensus 195 ~~~~-----~~~~~~~~~~~~g~~l~~~~~~~--~~~~v~~~d~~~~~~~~~--~~~~------~~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 195 TVKV-----EAAPSGIAVNPEGTKAYVTNVDK--YFNTVSMIDTGTNKITAR--IPVG------PDPAGIAVTPDGKKVY 259 (391)
T ss_dssp EEEC-----SSEEEEEEECTTSSEEEEEEECS--SCCEEEEEETTTTEEEEE--EECC------SSEEEEEECTTSSEEE
T ss_pred EEec-----CCCccceEECCCCCEEEEEecCc--CCCcEEEEECCCCeEEEE--EecC------CCccEEEEccCCCEEE
Confidence 3211 1111222222 344444443211 124688999987753322 2111 1112233334455677
Q ss_pred EEccCCCCcCceEEEEECCCC
Q 010551 313 AFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 313 v~GG~~~~~~~~~~~~~~~~~ 333 (507)
+.++.+ +.+.++|+...
T Consensus 260 ~s~~~d----~~v~v~d~~~~ 276 (391)
T 1l0q_A 260 VALSFX----NTVSVIDTATN 276 (391)
T ss_dssp EEETTT----TEEEEEETTTT
T ss_pred EEcCCC----CEEEEEECCCC
Confidence 766543 45777776543
No 33
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.62 E-value=0.029 Score=59.51 Aligned_cols=196 Identities=11% Similarity=-0.047 Sum_probs=96.1
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCC-cEEEeccCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~-~W~~~~~~~~~p~~ 192 (507)
...++++|+.++.-..+.. ..........+.+ +++.++++..+... ....++.+|+.++ ....+.........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCC---CSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeecc---CCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 4679999999987655431 1111112223333 44444444433221 2457999999998 66665421110000
Q ss_pred CCCceEEEEc--CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCc
Q 010551 193 RYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGC 268 (507)
Q Consensus 193 r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~ 268 (507)
.....++... ++.+++.+..++ ...+|.+|........+.. +. ........+ +++.+++.+.......
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~-~~----~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTK-GE----WEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCC-SS----SCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred CccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCC-CC----eEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 0012233344 565655554432 3578888877766666521 11 111121233 3344444333322234
Q ss_pred ceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 269 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 269 ~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
..+|.+|+.+.....+... .........+++.. +++...+......++++|+...
T Consensus 382 ~~l~~~d~~~~~~~~l~~~---------~~~~~~~~spdg~~-l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDLTPE---------SGMHRTQLSPDGSA-IIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp BEEEEEETTCCCCEESCCS---------SSEEEEEECTTSSE-EEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEEEEcCCCCceeccCC---------CceEEEEECCCCCE-EEEEecCCCCCcEEEEEECCCC
Confidence 5789999988776665421 11122222333333 4444433344567888887654
No 34
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.0076 Score=65.08 Aligned_cols=268 Identities=10% Similarity=-0.001 Sum_probs=138.9
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 80 (507)
+.|+++||+....+.........+... -++++.. ++.|+| |.. ...++.||+.++.++......
T Consensus 382 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~~-------- 446 (781)
T 3v9f_A 382 GGGINVFENGKRVAIYNKENRELLSNS-VLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELEK-------- 446 (781)
T ss_dssp SSCEEEEETTEEEEECC-----CCCSB-EEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCSTT--------
T ss_pred CCcEEEEECCCCeEEEccCCCCCCCcc-eEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccCC--------
Confidence 357888888877776553211111111 1222222 566776 321 135899999998887765311
Q ss_pred cCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEE
Q 010551 81 DSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~ 157 (507)
.....-.+++.. ++.|++... .-+++||+.+++|.........+.......+... ++.|++-
T Consensus 447 -------~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 447 -------NELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp -------TCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred -------CCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence 111112233333 466666421 2399999999998877532111111111222223 3566653
Q ss_pred cCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcE-EEEECCCCcEEeccc
Q 010551 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDL-HVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i-~~~d~~~~~W~~~~~ 236 (507)
..+ +-+++||+.+.++........+|.. ...+++.-.++.|++... +-+ ++||+.++++.....
T Consensus 512 -t~~------~Gl~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~ 576 (781)
T 3v9f_A 512 -TFG------GGVGIYTPDMQLVRKFNQYEGFCSN-TINQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQR 576 (781)
T ss_dssp -ESS------SCEEEECTTCCEEEEECTTTTCSCS-CEEEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECG
T ss_pred -EcC------CCEEEEeCCCCeEEEccCCCCCCCC-eeEEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccc
Confidence 221 2389999999999887643223211 112222223455666322 246 889998888877543
Q ss_pred CCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEc
Q 010551 237 KGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFG 315 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~G 315 (507)
...+|.... .+++.. +++|++.+. +.+..||+.+..+.......+.. ...+...++....+..|+ ||
T Consensus 577 ~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~dGl~---~~~f~~~~~~~~~~G~l~-~g 644 (781)
T 3v9f_A 577 KEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSNNIP---QGSFISGCVTKDHNGLIY-FG 644 (781)
T ss_dssp GGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGGTCC---SSCEEEEEEEECTTSCEE-EE
T ss_pred cCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccCCcc---ccccccCceEECCCCEEE-EE
Confidence 333343322 344433 456776531 24789999999888765433321 112222233444344444 47
Q ss_pred cCCCCcCceEEEEECC
Q 010551 316 GYNGKYNNEVFVMRLK 331 (507)
Q Consensus 316 G~~~~~~~~~~~~~~~ 331 (507)
|.+ -+..|++.
T Consensus 645 ~~~-----Gl~~f~p~ 655 (781)
T 3v9f_A 645 SIN-----GLCFFNPD 655 (781)
T ss_dssp ETT-----EEEEECSC
T ss_pred CCC-----ceEEEChh
Confidence 743 35666664
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.58 E-value=0.051 Score=50.87 Aligned_cols=190 Identities=15% Similarity=0.167 Sum_probs=96.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-...-... ......+.+ ++.+++.|+.+.
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~s~~~d~--- 129 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKTLKGH------------------SNYVFCCNFNPQSNLIVSGSFDE--- 129 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEECC------------------SSCEEEEEECSSSSEEEEEETTS---
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEcCC------------------CCCEEEEEEcCCCCEEEEEeCCC---
Confidence 45666666643 35888998876532211110 111112222 455666666543
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
.+.+||+.+++-...- +.......++.+ ++.+++.|+.++ .+.+||+.+.+....-.... .
T Consensus 130 ---~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~---~ 192 (312)
T 4ery_A 130 ---SVRIWDVKTGKCLKTL-----PAHSDPVSAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDD---N 192 (312)
T ss_dssp ---CEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSS---C
T ss_pred ---cEEEEECCCCEEEEEe-----cCCCCcEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccC---C
Confidence 3889999887643322 111112233333 456677777653 58999998876543321111 0
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEE-ECCeEEEEeccCCCCCcceE
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT-IDENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~ 271 (507)
.....+....++..++.|+.+ +.+.+||+.+..-.... .+............. .++.+++.|+.++ .+
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-----~i 261 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSEDN-----LV 261 (312)
T ss_dssp CCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCTTS-----CE
T ss_pred CceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECCCC-----EE
Confidence 111122223344466666643 36899999887644321 111111111122222 2456677766443 47
Q ss_pred EEEECCCCc
Q 010551 272 IVLNMTKLA 280 (507)
Q Consensus 272 ~~~d~~~~~ 280 (507)
.++|+.+..
T Consensus 262 ~vwd~~~~~ 270 (312)
T 4ery_A 262 YIWNLQTKE 270 (312)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCch
Confidence 889988765
No 36
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.56 E-value=0.02 Score=56.55 Aligned_cols=268 Identities=13% Similarity=0.021 Sum_probs=129.3
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 80 (507)
..++++|+.+.+.......+....+...-..+.+ ++.+|+.|+.+ ..+.+||+.++.....-...
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~~-------- 210 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVDLT-------- 210 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEECS--------
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEcCC--------
Confidence 3478888888877654321000011111112223 67888887632 46899999876543322111
Q ss_pred cCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEE
Q 010551 81 DSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLII 156 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~ 156 (507)
...-.+++.. ++.+|+.++.+ ..+.+||+.+++...... ... ....+.+ ++..++
T Consensus 211 ---------~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~-----~~~-~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 211 ---------GKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTD-----KIG-LPRGLLLSKDGKELY 269 (433)
T ss_dssp ---------SSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECC-----CCS-EEEEEEECTTSSEEE
T ss_pred ---------CCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEec-----CCC-CceEEEEcCCCCEEE
Confidence 0111222222 45677766432 359999999887644331 111 1223333 344444
Q ss_pred EcCCCCCCC--ccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 157 FGGEDRSRK--LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 157 ~GG~~~~~~--~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
+++...... .-+.+++||+.+.+-...... +.....++... ++.+|+.++.+ +.+.+||+.+++-..
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-----PGNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQK 339 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-----EECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred EEECCCCccccCCCeEEEEECCCCcEEeeccC-----CCCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEE
Confidence 444332211 134689999988764433211 01111222222 34677776543 469999998776543
Q ss_pred cccCCCCCCCCCccEEEEE-CCeEEEEeccCCCC----------CcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEE
Q 010551 234 PEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNN----------GCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCS 302 (507)
Q Consensus 234 ~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~----------~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~ 302 (507)
.-. ......+++.. +++.+++++..... .-..++++|+.+.......... ......
T Consensus 340 ~~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~--------~~~~~~ 406 (433)
T 3bws_A 340 SIP-----VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG--------NQPTGL 406 (433)
T ss_dssp EEE-----CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS--------SSEEEE
T ss_pred Eec-----CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC--------CCCceE
Confidence 211 11112233333 34444444322110 0136899999887654432211 112223
Q ss_pred EEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 303 AIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 303 ~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
...+.+..|++.+..+ ..+.+|++.
T Consensus 407 ~~s~dg~~l~~~~~~d----~~i~v~~~~ 431 (433)
T 3bws_A 407 DVSPDNRYLVISDFLD----HQIRVYRRD 431 (433)
T ss_dssp EECTTSCEEEEEETTT----TEEEEEEET
T ss_pred EEcCCCCEEEEEECCC----CeEEEEEec
Confidence 3334445665544322 456666654
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.56 E-value=0.0045 Score=56.48 Aligned_cols=199 Identities=10% Similarity=-0.045 Sum_probs=118.2
Q ss_pred ceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEE
Q 010551 93 DHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 93 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~ 172 (507)
..++...++.||+-.|..+. +.++|+.|++-..-. +|....+..++..+++||+.... .+.+++
T Consensus 57 tqGL~~~~~~Ly~stG~~g~------v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V 120 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGT------LRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWT------EGLLFT 120 (268)
T ss_dssp EEEEEEETTEEEEEETTTTE------EEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESS------SCEEEE
T ss_pred cceEEEECCEEEEEcCCCCE------EEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEcc------CCEEEE
Confidence 35677779999999886532 889999999743322 23334455677778899998653 357999
Q ss_pred EECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-cccCCCCCCCCCc-cEEE
Q 010551 173 LDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAG-HAGI 250 (507)
Q Consensus 173 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~-~~~~ 250 (507)
||+.+.+-..--. .+..+.+++ .+++.||+.-| .+.++.+|+.+.+-.. +.. +..+.+... --+.
T Consensus 121 ~D~~Tl~~~~ti~-----~~~eGwGLt-~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lNeLe 187 (268)
T 3nok_A 121 WSGMPPQRERTTR-----YSGEGWGLC-YWNGKLVRSDG------GTMLTFHEPDGFALVGAVQV-KLRGQPVELINELE 187 (268)
T ss_dssp EETTTTEEEEEEE-----CSSCCCCEE-EETTEEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEE
T ss_pred EECCcCcEEEEEe-----CCCceeEEe-cCCCEEEEECC------CCEEEEEcCCCCeEEEEEEe-CCCCcccccccccE
Confidence 9999877543321 122344444 45677998755 3589999999987554 222 222222111 2344
Q ss_pred EECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCC---C--CCCCCCceEEEEE-cCceEEEEEccCCCCcCce
Q 010551 251 TIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN---P--LASEGLSVCSAII-EGEHHLVAFGGYNGKYNNE 324 (507)
Q Consensus 251 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~---~--~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~ 324 (507)
..++++|+-- -..+++.++|+.+..-...-++.+.. + ..........+.+ +..+.|||.|- ....
T Consensus 188 ~~dG~lyanv-----w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK----~Wp~ 258 (268)
T 3nok_A 188 CANGVIYANI-----WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK----LWPR 258 (268)
T ss_dssp EETTEEEEEE-----TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET----TCSE
T ss_pred EeCCEEEEEE-----CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC----CCCc
Confidence 5578888542 12457999999998755443332110 0 1111223333344 44678998774 3455
Q ss_pred EEEEE
Q 010551 325 VFVMR 329 (507)
Q Consensus 325 ~~~~~ 329 (507)
+|...
T Consensus 259 ~~ev~ 263 (268)
T 3nok_A 259 LFEVR 263 (268)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 55543
No 38
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.54 E-value=0.018 Score=62.25 Aligned_cols=268 Identities=11% Similarity=0.060 Sum_probs=137.7
Q ss_pred CCCeEeeCCCCceEEeecCCCCCC----ccccceEEEE-CCE-EEEEcCCCCCccCCceEEEEccCCceeeeccccccCC
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPS----PRYKHAAAVF-DQK-LYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~----~r~~~~~~~~-~~~-iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 76 (507)
.|+++||+.+..+.........+. ...-++++.- ++. |+| |.. ...+++||+.++.+........
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~-----~~Gl~~~d~~~~~~~~~~~~~~--- 447 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTH-----AGGLSILHRNSGQVENFNQRNS--- 447 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EET-----TTEEEEEETTTCCEEEECTTTS---
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeC-----cCceeEEeCCCCcEEEeecCCC---
Confidence 588899999999988763210111 1111233332 455 665 322 1358999999988877653210
Q ss_pred CccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCC--cCcEEEEE--C
Q 010551 77 DKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTR--GGHSVTLV--G 151 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r--~~~~~~~~--~ 151 (507)
. .+...-.+++.. ++.|++... .-+++||+.+++|....... .+... ....+... +
T Consensus 448 ---------~-l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~i~~d~~ 508 (795)
T 4a2l_A 448 ---------Q-LVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEK-DGTPVVSKQITTLFRDSH 508 (795)
T ss_dssp ---------C-CSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCT-TCCBCCCCCEEEEEECTT
T ss_pred ---------C-cCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccc-cccccCCceEEEEEECCC
Confidence 1 111111222222 456666432 12899999999998875321 11111 11222233 3
Q ss_pred CEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCC-CC-CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 152 SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP-AP-RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 152 ~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p-~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
+.|++-.. +.+++||+.+..+ ........+ .+ ....+++.-.++.|++... +-+++||+.++
T Consensus 509 g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~ 572 (795)
T 4a2l_A 509 KRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDK 572 (795)
T ss_dssp CCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTT
T ss_pred CCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCC
Confidence 56766432 2389999988888 443210001 11 1112222223455666322 24899999999
Q ss_pred cEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCc
Q 010551 230 EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE 308 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ 308 (507)
.+........+|... ..+++.- ++++++.+. +.+..||+.+..+.......+.. .......++....+
T Consensus 573 ~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~---~~~f~~~~~~~~~~ 641 (795)
T 4a2l_A 573 QIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQ---SNQFNTASYCRTSV 641 (795)
T ss_dssp EEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCS---CSCEEEEEEEECTT
T ss_pred cEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCc---cccCccCceeECCC
Confidence 888764332333322 2233332 456777642 34789999999888765433321 11222233344444
Q ss_pred eEEEEEccCCCCcCceEEEEECC
Q 010551 309 HHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 309 ~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
..|+ |||.+ -+..|++.
T Consensus 642 G~l~-~g~~~-----Gl~~~~p~ 658 (795)
T 4a2l_A 642 GQMY-FGGIN-----GITTFRPE 658 (795)
T ss_dssp SCEE-EEETT-----EEEEECGG
T ss_pred CeEE-EecCC-----ceEEEcHH
Confidence 4454 46643 35556654
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.49 E-value=0.082 Score=51.09 Aligned_cols=221 Identities=15% Similarity=0.155 Sum_probs=119.6
Q ss_pred CCCeEeeCCCC--ceEEeecCCCC----CCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeecccccc
Q 010551 3 SGSWHLELPYD--LWVTLPVSGAR----PSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETEL 74 (507)
Q Consensus 3 ~~~~~~d~~~~--~W~~~~~~~~~----p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~ 74 (507)
..+++||+.+. .|..-...... .......+.++.++.||+... ...++.||+.+++ |+.....
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l~a~d~~tG~~~W~~~~~~--- 133 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQVYALNTSDGTVAWQTKVAG--- 133 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEEEEEETTTCCEEEEEECSS---
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEEEEEECCCCCEEEEEeCCC---
Confidence 35788898755 57654421100 012233444556888888653 2469999998875 6543211
Q ss_pred CCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEEECC
Q 010551 75 DADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTLVGS 152 (507)
Q Consensus 75 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~ 152 (507)
....+.+..++.+|+..+ ...++.||+.+++ |+..... +....+...+.+..++
T Consensus 134 ----------------~~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~~ 189 (376)
T 3q7m_A 134 ----------------EALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDM-PSLSLRGESAPTTAFG 189 (376)
T ss_dssp ----------------CCCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETT
T ss_pred ----------------ceEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCC-CceeecCCCCcEEECC
Confidence 112233455788877543 2359999998886 8765421 1111112233445577
Q ss_pred EEEEEcCCCCCCCccCcEEEEECCCCc--EEEeccCCC--CCCCC--CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEEC
Q 010551 153 RLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQT--PPAPR--YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL 226 (507)
Q Consensus 153 ~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~~~~~~~~--~p~~r--~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~ 226 (507)
.+|+ |.. ...++.||+.+++ |+....... ....+ ...+..++.++.+|+.+. ...++.||+
T Consensus 190 ~v~~-g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~d~ 256 (376)
T 3q7m_A 190 AAVV-GGD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTALDL 256 (376)
T ss_dssp EEEE-CCT------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEEEET
T ss_pred EEEE-EcC------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEEEC
Confidence 7665 332 2359999997764 765532100 00000 011222334665766432 136899999
Q ss_pred CCCc--EEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCc--EEE
Q 010551 227 QTNE--WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA--WSI 283 (507)
Q Consensus 227 ~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~--W~~ 283 (507)
.+++ |.... + ...+.+..++.+|+... ...++.||+.+.. |+.
T Consensus 257 ~tG~~~w~~~~--~------~~~~~~~~~~~l~~~~~------~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 257 RSGQIMWKREL--G------SVNDFIVDGNRIYLVDQ------NDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp TTCCEEEEECC--C------CEEEEEEETTEEEEEET------TCCEEEEETTTCCEEEEE
T ss_pred CCCcEEeeccC--C------CCCCceEECCEEEEEcC------CCeEEEEECCCCcEEEee
Confidence 8774 76531 1 12244556778888743 1258899988765 765
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.47 E-value=0.055 Score=52.90 Aligned_cols=264 Identities=11% Similarity=0.096 Sum_probs=129.1
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 80 (507)
|..++++|+.+.....+.. ......-.+++.. ++.+++.|+.+ ..+.+||+.++.-...-..
T Consensus 112 d~~v~lw~~~~~~~~~~~~---~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~--------- 174 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAE---TDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMAG--------- 174 (401)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECC---------
T ss_pred CCeEEEeeCCCCcEeEeee---cCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEecC---------
Confidence 4456778888887766653 2111111222222 55566666543 3588999887654332211
Q ss_pred cCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEc
Q 010551 81 DSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFG 158 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~G 158 (507)
.......+..++.+++.|+.+ ..+.+||+.+..-......+ ......++.+ ++.+++.|
T Consensus 175 ---------~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 175 ---------HQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQG----HSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp ---------CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC----CSSCEEEEEECTTSSEEEEE
T ss_pred ---------CCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcC----CCCCeeEEEEcCCCCEEEEE
Confidence 112223344466667777643 34888998754322211111 1112223333 45677777
Q ss_pred CCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccC
Q 010551 159 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 159 G~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
+.++ .+.+||+.+..-...-. .....-.+++... +..+++.||... -..+.+||+.++.-...-.
T Consensus 236 ~~d~------~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~p~~~~ll~~~~gs~---d~~i~i~d~~~~~~~~~~~- 301 (401)
T 4aez_A 236 GNDN------VVQIWDARSSIPKFTKT----NHNAAVKAVAWCPWQSNLLATGGGTM---DKQIHFWNAATGARVNTVD- 301 (401)
T ss_dssp ETTS------CEEEEETTCSSEEEEEC----CCSSCCCEEEECTTSTTEEEEECCTT---TCEEEEEETTTCCEEEEEE-
T ss_pred eCCC------eEEEccCCCCCccEEec----CCcceEEEEEECCCCCCEEEEecCCC---CCEEEEEECCCCCEEEEEe-
Confidence 7643 58999998765332211 1111122333332 344777765211 1368999998876543211
Q ss_pred CCCCCCCCccEEEEE--CC-eEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEE
Q 010551 238 GDLVTGRAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAF 314 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~ 314 (507)
... ....+.+ ++ .+++.+|... ..+.+||+.+.....+..+.... ....+....+.+. +++.
T Consensus 302 ----~~~-~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~~h~-----~~v~~~~~s~dg~-~l~s 366 (401)
T 4aez_A 302 ----AGS-QVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIPAHD-----TRVLYSALSPDGR-ILST 366 (401)
T ss_dssp ----CSS-CEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEECCS-----SCCCEEEECTTSS-EEEE
T ss_pred ----CCC-cEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEecCCC-----CCEEEEEECCCCC-EEEE
Confidence 111 1122222 33 4444444322 25788888887666554332221 1122233333333 4555
Q ss_pred ccCCCCcCceEEEEECCCCC
Q 010551 315 GGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 315 GG~~~~~~~~~~~~~~~~~~ 334 (507)
||.+ ..+.++++....
T Consensus 367 ~~~d----g~i~iw~~~~~~ 382 (401)
T 4aez_A 367 AASD----ENLKFWRVYDGD 382 (401)
T ss_dssp ECTT----SEEEEEECCC--
T ss_pred EeCC----CcEEEEECCCCc
Confidence 6644 467778876543
No 41
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.45 E-value=0.0046 Score=57.06 Aligned_cols=233 Identities=7% Similarity=-0.040 Sum_probs=117.6
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccC-CceeeeccccccCCCcc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRS-LAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~~~~~~~~~ 79 (507)
|..+|++|+.+.+...+.. .+ ..-.+++.. ++..+++++ ...++++|+.+ +....+....
T Consensus 21 ~~~i~~~d~~~~~~~~~~~---~~--~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~------- 82 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQ---TP--ELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGF------- 82 (297)
T ss_dssp CEEEEEEETTTTEEEEEEE---ES--SCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTT-------
T ss_pred ceeEEEEeCCCCceeeecc---CC--cceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEecccc-------
Confidence 4567899999988776653 11 111122222 455555554 23799999988 7665543221
Q ss_pred ccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEEEE
Q 010551 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLIIF 157 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy~~ 157 (507)
...........-+++.+++++.... ....++.++..++.-..+.. .. . ...++.. ++ .|++.
T Consensus 83 --------~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~---~~-~--~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 83 --------ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTK---NL-P--SYWHGWSPDGKSFTYC 146 (297)
T ss_dssp --------CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCS---SS-S--EEEEEECTTSSEEEEE
T ss_pred --------ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeec---CC-C--ccceEECCCCCEEEEE
Confidence 0111122222224555555553322 24569999998877555431 11 1 1222222 33 55555
Q ss_pred cCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEeccc
Q 010551 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
++.+. ...++.+|+.+.....+... ......+....+ +.+++.+..++ ...+|.+++.......+..
T Consensus 147 ~~~~~----~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 147 GIRDQ----VFDIYSMDIDSGVETRLTHG-----EGRNDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEETT----EEEEEEEETTTCCEEECCCS-----SSCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCC
T ss_pred ECCCC----ceEEEEEECCCCcceEcccC-----CCccccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEec
Confidence 55432 23577788887776655421 111122233334 43444433222 3468888877776665421
Q ss_pred CCCCCCCCCccEEEEE--CCeEEEEeccCCCC------CcceEEEEECCCCcEEEecc
Q 010551 237 KGDLVTGRAGHAGITI--DENWYIVGGGDNNN------GCQETIVLNMTKLAWSILTS 286 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~------~~~~~~~~d~~~~~W~~v~~ 286 (507)
. . .....+.+ +++.+++++..... ....++++|+.+.....+..
T Consensus 215 ---~--~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 215 ---S--A-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp ---C--S-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ---C--C-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 1 1 11112222 44555555433221 12468999999887766543
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.42 E-value=0.012 Score=57.16 Aligned_cols=224 Identities=16% Similarity=0.096 Sum_probs=118.8
Q ss_pred CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE---CCEEEEEeccCCCCC
Q 010551 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSS 114 (507)
Q Consensus 38 ~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~ 114 (507)
+.+|+.|+.+ ..+.++|+.++.-...-... . ....+.+ +..||+.|+.+
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~------------------~-~~~~~~~s~dg~~l~~~~~~d---- 53 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVG------------------S-NPMGAVISPDGTKVYVANAHS---- 53 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECS------------------S-SEEEEEECTTSSEEEEEEGGG----
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecC------------------C-CcceEEECCCCCEEEEECCCC----
Confidence 3567777643 46999999887654322211 0 1122333 44677776543
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
..+.+||+.+++.......+ . ....+.+ +..||+.+..+ +.+.+||+.+++.......+
T Consensus 54 --~~i~v~d~~~~~~~~~~~~~---~---~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~---- 115 (391)
T 1l0q_A 54 --NDVSIIDTATNNVIATVPAG---S---SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTG---- 115 (391)
T ss_dssp --TEEEEEETTTTEEEEEEECS---S---SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECS----
T ss_pred --CeEEEEECCCCeEEEEEECC---C---CccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCC----
Confidence 35999999998765543221 1 2223333 33566655432 46999999988765443211
Q ss_pred CCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-C-CeEEEEeccCCCCCc
Q 010551 192 PRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-D-ENWYIVGGGDNNNGC 268 (507)
Q Consensus 192 ~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~ 268 (507)
.....++... ++.+|+.++.+ +.+++||+.+++.......+.. ...++.. + ..+++.++.+
T Consensus 116 -~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~----- 179 (391)
T 1l0q_A 116 -KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFDS----- 179 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETTT-----
T ss_pred -CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCCC-----
Confidence 1123333333 44566666543 4799999998876553221211 1233332 2 3566665432
Q ss_pred ceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 269 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 269 ~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
..++++|+.+.......... ....+....+.+..|++.+.. .....++++|+...
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~g~~l~~~~~~--~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVE--------AAPSGIAVNPEGTKAYVTNVD--KYFNTVSMIDTGTN 234 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS--------SEEEEEEECTTSSEEEEEEEC--SSCCEEEEEETTTT
T ss_pred CEEEEEECCCCeEEEEEecC--------CCccceEECCCCCEEEEEecC--cCCCcEEEEECCCC
Confidence 35889999887654432211 111223333444556654421 12456777887543
No 43
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.39 E-value=0.012 Score=55.59 Aligned_cols=268 Identities=10% Similarity=-0.017 Sum_probs=130.3
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCce-eeeccccccCCCcc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAW-SNLRLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~ 79 (507)
..+.++|+.+.+.......+ . .+ ..+++- ++.||+.+..+ ..++++|+.++.. .......
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~-~-~~---~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~------- 82 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLG-Y-DF---VDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEG------- 82 (331)
T ss_dssp TEEEEEETTTCCEEEEEECC-C-CE---EEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEEC-------
T ss_pred CeEEEEeCcccceeeeEEcc-C-Cc---ceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeEEecccC-------
Confidence 45778899988887665321 1 11 123322 34577776522 3799999998875 2222111
Q ss_pred ccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEE
Q 010551 80 EDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLI 155 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy 155 (507)
..++ ++++.. +..|| .+..... ...+++||+.++.-......+..| +.++.. ++ .+|
T Consensus 83 --------~~~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~~~-----~~~~~spdg~~l~ 143 (331)
T 3u4y_A 83 --------QSSM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPYDA-----VGIAISPNGNGLI 143 (331)
T ss_dssp --------SSCC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCTTE-----EEEEECTTSSCEE
T ss_pred --------CCCc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCCCc-----cceEECCCCCEEE
Confidence 1112 212222 44566 3322111 226999999998765543322211 233332 33 577
Q ss_pred EEcCCCCCCCccCc-EEEEECCCCc-EEEeccCCCCCCCCCCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcE-
Q 010551 156 IFGGEDRSRKLLND-VHFLDLETMT-WDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEW- 231 (507)
Q Consensus 156 ~~GG~~~~~~~~n~-~~~~d~~t~~-W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W- 231 (507)
+.+..+ +. +.+|++.... ....... ..+.......++...+ +++|+.+..+ +.+.+||+.+++.
T Consensus 144 ~~~~~~------~~~i~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~~ 211 (331)
T 3u4y_A 144 LIDRSS------ANTVRRFKIDADGVLFDTGQE-FISGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPENI 211 (331)
T ss_dssp EEEETT------TTEEEEEEECTTCCEEEEEEE-EECSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTSC
T ss_pred EEecCC------CceEEEEEECCCCcEeecCCc-cccCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCccc
Confidence 665432 34 7777765422 1111000 0111111233333334 4577765432 4699999988775
Q ss_pred --EecccCCCCCCCCCccEEEEE-CCe-EEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCC---CCCCCCCceEEEE
Q 010551 232 --SQPEIKGDLVTGRAGHAGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN---PLASEGLSVCSAI 304 (507)
Q Consensus 232 --~~~~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~---~~~~~~~~~~~~~ 304 (507)
...- +.......++.. +++ +|+... ..+.++++|+.+.....+...+... +.+.... .....
T Consensus 212 ~~~~~~-----~~~~~~~~~~~spdg~~l~v~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 280 (331)
T 3u4y_A 212 TLLNAV-----GTNNLPGTIVVSRDGSTVYVLTE-----STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGA-NQMAL 280 (331)
T ss_dssp EEEEEE-----ECSSCCCCEEECTTSSEEEEECS-----SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTC-CCEEE
T ss_pred ceeeec-----cCCCCCceEEECCCCCEEEEEEc-----CCCEEEEEECCCCceeeecccccccccCCCCcccc-cceEE
Confidence 2211 111111223333 344 666543 1235889999988775554333221 1111111 12334
Q ss_pred EcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 305 IEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 305 ~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
.+.+..|++.++. .+.+.++|+...
T Consensus 281 spdg~~l~v~~~~----~~~v~v~d~~~~ 305 (331)
T 3u4y_A 281 NKTETKLFISANI----SRELKVFTISGK 305 (331)
T ss_dssp CTTSSEEEEEETT----TTEEEEEETTSC
T ss_pred CCCCCEEEEecCC----CCcEEEEEecCC
Confidence 4455677775543 356888887643
No 44
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.37 E-value=0.0089 Score=64.51 Aligned_cols=224 Identities=8% Similarity=-0.006 Sum_probs=122.4
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
.|+++||+.+.+++.+... ..+. ..-.+++.- ++.|++... ..+++||+.++.|.........
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~-~~~~-~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~------- 490 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELE-KNEL-LDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNS------- 490 (781)
T ss_dssp EEEEEECSSSCEEEECCST-TTCC-CCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTS-------
T ss_pred CCEEEEcCCCCcEEEeccC-CCCC-CeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCccc-------
Confidence 5788899999999888632 1111 111222222 467766432 4599999999988776532210
Q ss_pred CCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEc
Q 010551 82 SGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFG 158 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~G 158 (507)
..+.... .+++.. ++.|++.. .. .-+++||+.++++........+|.. ...+... ++.|++-.
T Consensus 491 ----~~~~~~i-~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 491 ----QLLENFV-RSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFCSN--TINQIYRSSKGQMWLAT 556 (781)
T ss_dssp ----SCSCSCE-EEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCSCS--CEEEEEECTTSCEEEEE
T ss_pred ----cccccee-EEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCCCC--eeEEEEECCCCCEEEEE
Confidence 1111111 222222 45666542 21 1289999999999887642223221 1222223 45676643
Q ss_pred CCCCCCCccCcE-EEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccC
Q 010551 159 GEDRSRKLLNDV-HFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 159 G~~~~~~~~n~~-~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
. +-+ ++||+.+.++........+|... ..+++.-.++.|++.+. +-+.+||+.+..+......
T Consensus 557 ~--------~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 557 G--------EGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp T--------TEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGG
T ss_pred C--------CCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEcC-------CceEEEECCCCceEEeccc
Confidence 2 236 89999999888876543444333 24444444566776542 3589999999998876543
Q ss_pred CCCCCCCCc-cEEEEECCeEEEEeccCCCCCcceEEEEECCC
Q 010551 238 GDLVTGRAG-HAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 238 ~~~p~~r~~-~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
..++...+. .+++...+-.+.|||.+ -+..||+..
T Consensus 621 dGl~~~~f~~~~~~~~~~G~l~~g~~~------Gl~~f~p~~ 656 (781)
T 3v9f_A 621 NNIPQGSFISGCVTKDHNGLIYFGSIN------GLCFFNPDI 656 (781)
T ss_dssp GTCCSSCEEEEEEEECTTSCEEEEETT------EEEEECSCC
T ss_pred CCccccccccCceEECCCCEEEEECCC------ceEEEChhh
Confidence 334433322 23333334445556533 245666543
No 45
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.37 E-value=0.04 Score=52.00 Aligned_cols=276 Identities=13% Similarity=0.054 Sum_probs=122.6
Q ss_pred CCCeEeeCC-CCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEcc--CCceeeeccccccCCC
Q 010551 3 SGSWHLELP-YDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLR--SLAWSNLRLETELDAD 77 (507)
Q Consensus 3 ~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~--~~~W~~~~~~~~~~~~ 77 (507)
..+++||+. ......+.. .+.....+.++.. +..||+.+..+ ..+.+|++. ++++..+......
T Consensus 15 ~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~--- 83 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQV---VDVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGALTFAAESALP--- 83 (343)
T ss_dssp TEEEEEEECTTSCEEEEEE---EECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEECS---
T ss_pred CeEEEEEECCCCcEEEeee---EecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCceeeccccccC---
Confidence 446677664 455554432 1122222233332 34466655421 467787776 7777765443211
Q ss_pred ccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCc-EEEeecCCCCCCCCcCcEEEEE--CC
Q 010551 78 KTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVTRGGHSVTLV--GS 152 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~ 152 (507)
... ..++.. ++.||+.+.. ...+.+||+.++. ....... +....-+.++.. +.
T Consensus 84 ------------~~~-~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 84 ------------GSL-THISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVV---EGLDGCHSANISPDNR 141 (343)
T ss_dssp ------------SCC-SEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEE---CCCTTBCCCEECTTSS
T ss_pred ------------CCC-cEEEEcCCCCEEEEEecC------CCeEEEEECCCCccccccccc---cCCCCceEEEECCCCC
Confidence 111 122222 3446665432 2347788774332 2222211 111111222222 33
Q ss_pred EEEEEcCCCCCCCccCcEEEEECCC-CcEEEec--cCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECC-
Q 010551 153 RLIIFGGEDRSRKLLNDVHFLDLET-MTWDAVE--VTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQ- 227 (507)
Q Consensus 153 ~iy~~GG~~~~~~~~n~~~~~d~~t-~~W~~~~--~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~- 227 (507)
.||+.+.. .+.+.+||+.+ .+...+. .. ..+....-..++... ++++|+.+..+ +.+.+||+.
T Consensus 142 ~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~~ 209 (343)
T 1ri6_A 142 TLWVPALK------QDRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELKD 209 (343)
T ss_dssp EEEEEEGG------GTEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESSC
T ss_pred EEEEecCC------CCEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEecC
Confidence 67665522 24589999987 6665432 10 011111111233333 34566665332 468888884
Q ss_pred -CCcEEecccCCCCCCC---CCccEEEEE--CC-eEEEEeccCCCCCcceEEEEECC--CCcEEEeccCCCCCCCCCCCC
Q 010551 228 -TNEWSQPEIKGDLVTG---RAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMT--KLAWSILTSVKGRNPLASEGL 298 (507)
Q Consensus 228 -~~~W~~~~~~~~~p~~---r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~d~~--~~~W~~v~~~~~~~~~~~~~~ 298 (507)
++.+.........|.. ......+.+ ++ .+|+.+..+ ..+.+||+. +..+..+..++.. +.
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~------~~ 278 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTE------TQ 278 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECS------SS
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCC------Cc
Confidence 4544332211222221 111222333 23 566554322 357788877 5566665443321 11
Q ss_pred ceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCCCC
Q 010551 299 SVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 336 (507)
Q Consensus 299 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w~ 336 (507)
.......+.+.+|++.++.++ .-.+|.+|.....+.
T Consensus 279 ~~~~~~s~dg~~l~~~~~~~~--~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAAGQKSH--HISVYEIVGEQGLLH 314 (343)
T ss_dssp CCCEEECTTSSEEEEECTTTC--EEEEEEEETTTTEEE
T ss_pred cceEEECCCCCEEEEecCCCC--eEEEEEEcCCCceee
Confidence 122333444556776554322 233555576555443
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.34 E-value=0.065 Score=51.23 Aligned_cols=231 Identities=13% Similarity=0.110 Sum_probs=108.4
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCcccc-ceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYK-HAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~ 79 (507)
|..+.+||+....|..+.. ....... .+++.. ++.+++.|+.+ ..+.+||+.++.+........
T Consensus 29 d~~v~i~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~------ 94 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHE---LKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVILR------ 94 (372)
T ss_dssp SSEEEEEEEETTEEEEEEE---EECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEEEEECCC------
T ss_pred CCEEEEEeCCCCcEEeeee---ecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEeec------
Confidence 3456778888887655543 1111111 122222 45666666643 358899998888765443221
Q ss_pred ccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCc-EEEeecCCCCCCCCcCcEEEEE--CCEE
Q 010551 80 EDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVTRGGHSVTLV--GSRL 154 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~i 154 (507)
.......+.+ ++..++.|+.+. .+.+||+.+.. |...... ..+. .....++.+ ++..
T Consensus 95 ----------~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~-~~~~-~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 95 ----------INRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHI-KKPI-RSTVLSLDWHPNSVL 156 (372)
T ss_dssp ----------CSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEE-CTTC-CSCEEEEEECTTSSE
T ss_pred ----------CCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeee-eccc-CCCeeEEEEcCCCCE
Confidence 0111222333 455666666432 26666655543 3322211 1111 112223333 4566
Q ss_pred EEEcCCCCCCCccCcEEEEECCCCc----------------EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCC
Q 010551 155 IIFGGEDRSRKLLNDVHFLDLETMT----------------WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFF 218 (507)
Q Consensus 155 y~~GG~~~~~~~~n~~~~~d~~t~~----------------W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~ 218 (507)
++.|+.++ .+.+||+.... -..+... ......-.+++...++.+++.|+.+
T Consensus 157 l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d----- 223 (372)
T 1k8k_C 157 LAAGSCDF------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES--SSSCGWVHGVCFSANGSRVAWVSHD----- 223 (372)
T ss_dssp EEEEETTS------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC--CCCSSCEEEEEECSSSSEEEEEETT-----
T ss_pred EEEEcCCC------CEEEEEcccccccccccccccccccchhhheEec--CCCCCeEEEEEECCCCCEEEEEeCC-----
Confidence 77777543 58888864211 1111110 0001111222233344466666643
Q ss_pred CcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCC--CcEEEeccC
Q 010551 219 NDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTK--LAWSILTSV 287 (507)
Q Consensus 219 ~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~--~~W~~v~~~ 287 (507)
+.+.+||+.+..-...-. .. .....+++.. ++.+++.| .++ .+.+|++.+ +.|..+..+
T Consensus 224 ~~i~i~d~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~l~~~-~d~-----~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 224 STVCLADADKKMAVATLA-SE---TLPLLAVTFITESSLVAAG-HDC-----FPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp TEEEEEEGGGTTEEEEEE-CS---SCCEEEEEEEETTEEEEEE-TTS-----SCEEEEEETTTTEEEECCCC
T ss_pred CEEEEEECCCCceeEEEc-cC---CCCeEEEEEecCCCEEEEE-eCC-----eEEEEEccCcCceEEEeecc
Confidence 358899988766433211 10 1111222332 55655554 322 356777776 888876544
No 47
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.32 E-value=0.07 Score=52.62 Aligned_cols=239 Identities=10% Similarity=0.109 Sum_probs=121.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.|...+...++.....++++|+....-..+.... .. ...+.+ +++.+++++....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~-----------------~~--v~~~~~Spdg~~la~~s~~~~-- 201 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP-----------------QP--LMSPAWSPDGSKLAYVTFESG-- 201 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES-----------------SC--EEEEEECTTSSEEEEEECTTS--
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC-----------------Cc--ceeeEEcCCCCEEEEEEecCC--
Confidence 445544443322223367999998765544433211 01 122222 4555555554322
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CC-EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~-~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
...++++|+.+++...+. ..+. ...+..+ ++ .|++.+..+. ...++.+|+.+.+...+...
T Consensus 202 -~~~i~~~d~~tg~~~~l~---~~~~---~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~----- 265 (415)
T 2hqs_A 202 -RSALVIQTLANGAVRQVA---SFPR---HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDG----- 265 (415)
T ss_dssp -SCEEEEEETTTCCEEEEE---CCSS---CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCC-----
T ss_pred -CcEEEEEECCCCcEEEee---cCCC---cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCC-----
Confidence 246999999999877654 2111 1223333 34 5555554432 34699999998887655421
Q ss_pred CCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcc
Q 010551 192 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~ 269 (507)
.......+...++..+++++..+. ...+|.+|+.++.-..+.. .... ...+.+ +++.+++++... ...
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~~l~~-----~~~~-~~~~~~spdG~~l~~~~~~~--g~~ 335 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQRITW-----EGSQ-NQDADVSSDGKFMVMVSSNG--GQQ 335 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCEECCC-----SSSE-EEEEEECTTSSEEEEEEECS--SCE
T ss_pred CCcccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEEEEec-----CCCc-ccCeEECCCCCEEEEEECcC--Cce
Confidence 111122222334444444443211 2479999998876554321 1111 112222 455555554322 235
Q ss_pred eEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 270 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 270 ~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
.++++|+.+.....+.... ........+++. .+++++..+. ...+|++|+...
T Consensus 336 ~i~~~d~~~~~~~~l~~~~---------~~~~~~~spdg~-~l~~~s~~~~-~~~l~~~d~~g~ 388 (415)
T 2hqs_A 336 HIAKQDLATGGVQVLSSTF---------LDETPSLAPNGT-MVIYSSSQGM-GSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEETTTCCEEECCCSS---------SCEEEEECTTSS-EEEEEEEETT-EEEEEEEETTSC
T ss_pred EEEEEECCCCCEEEecCCC---------CcCCeEEcCCCC-EEEEEEcCCC-ccEEEEEECCCC
Confidence 7899999998876653221 122222333333 4444543321 347899998644
No 48
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.30 E-value=0.071 Score=52.74 Aligned_cols=214 Identities=13% Similarity=0.140 Sum_probs=108.8
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
|..+.++|..+.+-...-. .....-.++..++.+++.|+.+ ..+.++|+.++.-...-..
T Consensus 152 dg~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~---------- 211 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILT-----GHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNTLIH---------- 211 (435)
T ss_dssp SSCEEEEESSSCCEEEEEC-----CCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEEECC----------
T ss_pred CCeEEEEeCCCCeEEEEEc-----CCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcEEEEEcC----------
Confidence 3345566666554433321 1111222333467777777744 3588999988754322111
Q ss_pred CCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCC
Q 010551 82 SGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGED 161 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~ 161 (507)
.......+.+.+..++.|+.++ .+.+||..++.-..... ..........++.+++..++.|+.+
T Consensus 212 --------h~~~v~~l~~~~~~l~s~s~dg------~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~l~s~~~d 275 (435)
T 1p22_A 212 --------HCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDKYIVSASGD 275 (435)
T ss_dssp --------CCSCEEEEECCTTEEEEEETTS------CEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETTEEEEEETT
T ss_pred --------CCCcEEEEEEcCCEEEEeeCCC------cEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCCEEEEEeCC
Confidence 1112233444555666666432 38888988765321110 0111112223344466666666654
Q ss_pred CCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCC
Q 010551 162 RSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV 241 (507)
Q Consensus 162 ~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p 241 (507)
+.+.+||+.+.+-...-. ........+..+++ +++.|+.+ +.+.+||+.++.-...-. +
T Consensus 276 ------g~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~~~~~~~-~--- 334 (435)
T 1p22_A 276 ------RTIKVWNTSTCEFVRTLN-----GHKRGIACLQYRDR-LVVSGSSD-----NTIRLWDIECGACLRVLE-G--- 334 (435)
T ss_dssp ------SEEEEEETTTCCEEEEEE-----CCSSCEEEEEEETT-EEEEEETT-----SCEEEEETTTCCEEEEEC-C---
T ss_pred ------CeEEEEECCcCcEEEEEc-----CCCCcEEEEEeCCC-EEEEEeCC-----CeEEEEECCCCCEEEEEe-C---
Confidence 358899998775433211 01112233444555 66666654 368999998765433210 1
Q ss_pred CCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCC
Q 010551 242 TGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 242 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
....-.++..++..++.|+.++ .+.+||+.+
T Consensus 335 -h~~~v~~~~~~~~~l~sg~~dg-----~i~vwd~~~ 365 (435)
T 1p22_A 335 -HEELVRCIRFDNKRIVSGAYDG-----KIKVWDLVA 365 (435)
T ss_dssp -CSSCEEEEECCSSEEEEEETTS-----CEEEEEHHH
T ss_pred -CcCcEEEEEecCCEEEEEeCCC-----cEEEEECCC
Confidence 1111223344777788877543 367777644
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.26 E-value=0.068 Score=50.17 Aligned_cols=188 Identities=17% Similarity=0.040 Sum_probs=97.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++........... ......+.+ ++..++.|+.+
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~~d---- 162 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSS----------------APACYALAISPDSKVCFSCCSD---- 162 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECS----------------SSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecccC----------------CCceEEEEECCCCCEEEEEeCC----
Confidence 45556666533 4689999988775443332210 111222222 45566666643
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
..+.+||+.++....... .. .....++.+ ++..++.|+.+ +.+.+||+.+.+-..... . .
T Consensus 163 --g~v~~~d~~~~~~~~~~~---~~--~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~---~--~ 224 (337)
T 1gxr_A 163 --GNIAVWDLHNQTLVRQFQ---GH--TDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHD---F--T 224 (337)
T ss_dssp --SCEEEEETTTTEEEEEEC---CC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEE---C--S
T ss_pred --CcEEEEeCCCCceeeeee---cc--cCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeec---C--C
Confidence 238899999886544321 11 112223333 45566666643 358999998776433321 1 1
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceE
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~ 271 (507)
....+++...++.++++|+.+ +.+.+||+.+..-.... . ....-.++... ++.+++.|+.++ .+
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~~~l~~~~~dg-----~i 289 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKYQLH--L---HESCVLSLKFAYCGKWFVSTGKDN-----LL 289 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEEEEC--C---CSSCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred CceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeEEEc--C---CccceeEEEECCCCCEEEEecCCC-----cE
Confidence 112233333455566666643 35889998876543321 1 11111122222 456667766432 57
Q ss_pred EEEECCCCcEE
Q 010551 272 IVLNMTKLAWS 282 (507)
Q Consensus 272 ~~~d~~~~~W~ 282 (507)
.+||+.+..-.
T Consensus 290 ~~~~~~~~~~~ 300 (337)
T 1gxr_A 290 NAWRTPYGASI 300 (337)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCeEE
Confidence 88998877644
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.24 E-value=0.092 Score=51.92 Aligned_cols=189 Identities=14% Similarity=0.155 Sum_probs=102.7
Q ss_pred EEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCC
Q 010551 34 AVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS 113 (507)
Q Consensus 34 ~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 113 (507)
+..++..++.|+.+ ..+.+||..++.-...-... .....++..++.+++.|+.++
T Consensus 139 ~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~h------------------~~~v~~l~~~~~~l~sg~~dg-- 193 (435)
T 1p22_A 139 LQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILTGH------------------TGSVLCLQYDERVIITGSSDS-- 193 (435)
T ss_dssp EECCSSEEEEEESS-----SCEEEEESSSCCEEEEECCC------------------SSCEEEEECCSSEEEEEETTS--
T ss_pred EEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEcCC------------------CCcEEEEEECCCEEEEEcCCC--
Confidence 33467777777644 46899998876543322111 112234444777777777543
Q ss_pred CCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCC
Q 010551 114 SDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 114 ~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r 193 (507)
.+.+||..++.-..... .......++.+++..++.|+.++ .+.+||+.+..-..... ......
T Consensus 194 ----~i~vwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~l~s~s~dg------~i~vwd~~~~~~~~~~~--~~~~~~ 256 (435)
T 1p22_A 194 ----TVRVWDVNTGEMLNTLI-----HHCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPTDITLRR--VLVGHR 256 (435)
T ss_dssp ----CEEEEESSSCCEEEEEC-----CCCSCEEEEECCTTEEEEEETTS------CEEEEECSSSSCCEEEE--EECCCS
T ss_pred ----eEEEEECCCCcEEEEEc-----CCCCcEEEEEEcCCEEEEeeCCC------cEEEEeCCCCCCceeee--EecCCC
Confidence 38899998886543321 11122334444555667777543 58889987654221100 001112
Q ss_pred CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEE
Q 010551 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIV 273 (507)
Q Consensus 194 ~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 273 (507)
.....+..+++ .++.|+.+ ..+.+||+.+..-...-. .......++..++.+++.|+.++ .+.+
T Consensus 257 ~~v~~~~~~~~-~l~s~~~d-----g~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~g~~dg-----~i~i 320 (435)
T 1p22_A 257 AAVNVVDFDDK-YIVSASGD-----RTIKVWNTSTCEFVRTLN-----GHKRGIACLQYRDRLVVSGSSDN-----TIRL 320 (435)
T ss_dssp SCEEEEEEETT-EEEEEETT-----SEEEEEETTTCCEEEEEE-----CCSSCEEEEEEETTEEEEEETTS-----CEEE
T ss_pred CcEEEEEeCCC-EEEEEeCC-----CeEEEEECCcCcEEEEEc-----CCCCcEEEEEeCCCEEEEEeCCC-----eEEE
Confidence 22233444555 55555543 368899998876443211 11112233344667777777543 4788
Q ss_pred EECCCCc
Q 010551 274 LNMTKLA 280 (507)
Q Consensus 274 ~d~~~~~ 280 (507)
||+.+..
T Consensus 321 wd~~~~~ 327 (435)
T 1p22_A 321 WDIECGA 327 (435)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9988764
No 51
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.23 E-value=0.26 Score=52.17 Aligned_cols=129 Identities=18% Similarity=0.153 Sum_probs=74.3
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCCccccCCCcCCCCC---ccceeEEEECCEEEE
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPP---MSDHCMVKWGTKLLI 105 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~---r~~~~~~~~~~~lyv 105 (507)
.+-++.++.||+... .+.++.+|..+++ |+.-...... ..+.. ....+.++.++.||+
T Consensus 64 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~v~v 126 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRH-----------RAGEACCDAVNRGVAVWKGKVYV 126 (689)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGG-----------GGGGCTTCSCCCCCEEETTEEEE
T ss_pred ecCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCcc-----------ccccccccCCCCccEEECCEEEE
Confidence 344567999999764 3469999998875 8754322100 00000 112234567888888
Q ss_pred EeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc--EE
Q 010551 106 LGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WD 181 (507)
Q Consensus 106 ~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~ 181 (507)
... ...++.+|..|++ |+...............+.++.++.+|+-.+ .........++.||..|++ |+
T Consensus 127 ~~~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~-~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 127 GVL-------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNG-GAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ECT-------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCB-CTTTCCBCEEEEEETTTCCEEEE
T ss_pred Ecc-------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeC-CCccCCCCEEEEEECCCCcEEEE
Confidence 642 2359999999886 8765420111111222234556888776322 2111134579999998876 87
Q ss_pred Eec
Q 010551 182 AVE 184 (507)
Q Consensus 182 ~~~ 184 (507)
.-.
T Consensus 199 ~~~ 201 (689)
T 1yiq_A 199 FYT 201 (689)
T ss_dssp EES
T ss_pred ecc
Confidence 653
No 52
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.21 E-value=0.016 Score=57.28 Aligned_cols=231 Identities=10% Similarity=-0.027 Sum_probs=119.3
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
..+|++|+....-..+... . ... .+.+.. +++.+++++.+++ ...++++|+.++....+....
T Consensus 159 ~~i~i~d~~g~~~~~l~~~---~-~~v-~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~--------- 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS---P-QPL-MSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFP--------- 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE---S-SCE-EEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCS---------
T ss_pred ceEEEEcCCCCCCEEEeCC---C-Ccc-eeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCC---------
Confidence 3467777765554444321 0 011 111211 4555555554332 257999999988776544221
Q ss_pred CCCcCCCCCccceeEEEE--CC-EEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEE
Q 010551 82 SGLLEVLPPMSDHCMVKW--GT-KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLII 156 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~ 156 (507)
. ....+.+ ++ .|++.+.... ...++++|+.++....+.. .+ .......+ +++.++
T Consensus 223 ---------~-~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~---~~---~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 223 ---------R-HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTD---GR---SNNTEPTWFPDSQNLA 282 (415)
T ss_dssp ---------S-CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCC---CS---SCEEEEEECTTSSEEE
T ss_pred ---------C-cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcC---CC---CcccceEECCCCCEEE
Confidence 1 1222333 34 4555544322 3469999999988765531 11 11222333 444444
Q ss_pred EcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEeccc
Q 010551 157 FGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 157 ~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
+++... ....++.+|+.+..-..+... .......+...++..+++++.... ...++++|+.++....+..
T Consensus 283 ~~s~~~---g~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 283 FTSDQA---GRPQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp EEECTT---SSCEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCC
T ss_pred EEECCC---CCcEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecC
Confidence 443221 134699999988775554321 111122233334444555443221 3479999999988866532
Q ss_pred CCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccC
Q 010551 237 KGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~ 287 (507)
. . ...+.+.. +++.+++++.... ...++++|+.......++..
T Consensus 353 --~---~-~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 353 --T---F-LDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp --S---S-SCEEEEECTTSSEEEEEEEETT--EEEEEEEETTSCCEEECCCS
T ss_pred --C---C-CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCCCcEEEeeCC
Confidence 1 1 11222222 4566666654322 34789999988877776543
No 53
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.16 E-value=0.068 Score=50.22 Aligned_cols=270 Identities=12% Similarity=-0.050 Sum_probs=126.3
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCcc-ccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPR-YKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADK 78 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~ 78 (507)
|..++++|+.+.+-...-. .+... ..+.+++. ++.+|+.+.. ...++++|+.++.-...-.....
T Consensus 10 ~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---- 77 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVIT---IADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTP---- 77 (337)
T ss_dssp TTEEEEEETTTTEEEEEEE---CTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBT----
T ss_pred CCeEEEEECCCCcEEEEEE---cCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCc----
Confidence 5568899998876654332 11111 12233333 3467777652 24699999988765432211100
Q ss_pred cccCCCcCCCCCccceeEEEE--CCEEEEEeccC---CCCC--CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-
Q 010551 79 TEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHY---KKSS--DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV- 150 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~---~~~~--~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~- 150 (507)
. .....-+.++.. ++.||+..... .... ....+++||+.+++.......+.. -..++..
T Consensus 78 -------~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~s~ 144 (337)
T 1pby_B 78 -------E-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-----ITMLAWAR 144 (337)
T ss_dssp -------T-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-----CCCEEECT
T ss_pred -------c-cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC-----cceeEECC
Confidence 0 000011122222 34677764210 0100 135699999998876544322211 1222222
Q ss_pred CC-EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCC-------------C-
Q 010551 151 GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSH-------------S- 215 (507)
Q Consensus 151 ~~-~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~-------------~- 215 (507)
++ .||+.+ +.++++|+.+.+-...-..+..+.+. ...-++..+|+.+..+. .
T Consensus 145 dg~~l~~~~---------~~i~~~d~~~~~~~~~~~~~~~~~~~----~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (337)
T 1pby_B 145 DGSKLYGLG---------RDLHVMDPEAGTLVEDKPIQSWEAET----YAQPDVLAVWNQHESSGVMATPFYTARKDIDP 211 (337)
T ss_dssp TSSCEEEES---------SSEEEEETTTTEEEEEECSTTTTTTT----BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred CCCEEEEeC---------CeEEEEECCCCcEeeeeeccccCCCc----eeCCCccEEeeeccCCCceeeeeecccccccc
Confidence 33 466652 35999999888754332222211111 11112222332221110 0
Q ss_pred ----CCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CC-eEEEEeccCCCCCcceEEEEECCCCcEEEeccCCC
Q 010551 216 ----IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKG 289 (507)
Q Consensus 216 ----~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~ 289 (507)
.....++++|+.+++-..+.. .+.....++++.. ++ .+|+. ...+++||+.+..-......+.
T Consensus 212 ~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~~~ 280 (337)
T 1pby_B 212 ADPTAYRTGLLTMDLETGEMAMREV---RIMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASIKRVPLPH 280 (337)
T ss_dssp TSGGGEEEEEEEEETTTCCEEEEEE---EECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEEEEEECSS
T ss_pred ccccccccceEEEeCCCCCceEeec---CCCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCcceecCCC
Confidence 011158899998887653221 1111112223332 23 44444 1478999998876433222211
Q ss_pred CCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 290 RNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
...+....+.+..|++. +. .+.+.++|+...
T Consensus 281 --------~~~~~~~s~dg~~l~~~-~~----~~~i~v~d~~~~ 311 (337)
T 1pby_B 281 --------SYYSVNVSTDGSTVWLG-GA----LGDLAAYDAETL 311 (337)
T ss_dssp --------CCCEEEECTTSCEEEEE-SB----SSEEEEEETTTC
T ss_pred --------ceeeEEECCCCCEEEEE-cC----CCcEEEEECcCC
Confidence 11223334445567664 32 367888998655
No 54
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.12 E-value=0.076 Score=54.52 Aligned_cols=273 Identities=14% Similarity=0.095 Sum_probs=134.1
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEc--cCCceeeeccccccCCCcc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDL--RSLAWSNLRLETELDADKT 79 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~~~~~~~~~ 79 (507)
.+.++|+.+.+-...-..|. ..|.+++. +..||+.+. + +.+.+||+ .+++-...-..+
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~-----~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~~~~i~~g------- 221 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGY-----AVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTKVAEIKIG------- 221 (543)
T ss_dssp EEEEEETTTCCEEEEEECST-----TEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEEEEEEECC-------
T ss_pred eEEEEECCCceEEEEEecCc-----ccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcEEEEEecC-------
Confidence 45667777766543321111 14544443 446666653 1 67999999 555432211111
Q ss_pred ccCCCcCCCCCccceeEEEE----CC-EEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCC--------CCCCcCcE
Q 010551 80 EDSGLLEVLPPMSDHCMVKW----GT-KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV--------PVTRGGHS 146 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~----~~-~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~--------p~~r~~~~ 146 (507)
....+.+..- ++ .||+. +.. ...+.++|..+++-........+ |.++....
T Consensus 222 ----------~~p~~va~sp~~~~dg~~l~v~-~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i 285 (543)
T 1nir_A 222 ----------IEARSVESSKFKGYEDRYTIAG-AYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 285 (543)
T ss_dssp ----------SEEEEEEECCSTTCTTTEEEEE-EEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEE
T ss_pred ----------CCcceEEeCCCcCCCCCEEEEE-Ecc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEE
Confidence 1111222222 34 45554 322 23588899988875443322111 11222222
Q ss_pred EEEE-CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcC-CEEEEEcCCCCCCCCCcEEEE
Q 010551 147 VTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVL 224 (507)
Q Consensus 147 ~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~ 224 (507)
+... +..+|+.... .+.++.+|..+.+-..+.. .+..+.-+.++...+ +++|+.+.. .+.+.++
T Consensus 286 ~~s~~~~~~~vs~~~------~g~i~vvd~~~~~~l~~~~---i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~ 351 (543)
T 1nir_A 286 IASHEHPEFIVNVKE------TGKVLLVNYKDIDNLTVTS---IGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVI 351 (543)
T ss_dssp EECSSSSEEEEEETT------TTEEEEEECTTSSSCEEEE---EECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEE
T ss_pred EECCCCCEEEEEECC------CCeEEEEEecCCCcceeEE---eccCcCccCceECCCCCEEEEEecC-----CCeEEEE
Confidence 2222 3455544322 3579999987754221111 111233334444434 445554332 2578899
Q ss_pred ECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCC-----cEEEeccCCCCCCCCCCC
Q 010551 225 DLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKL-----AWSILTSVKGRNPLASEG 297 (507)
Q Consensus 225 d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~-----~W~~v~~~~~~~~~~~~~ 297 (507)
|+.+++-...-..+..|.+-.+... .. ++.+|+.+.... ..+-++|+.+. .|+.+..++... +
T Consensus 352 D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~~~g-----~ 421 (543)
T 1nir_A 352 DSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQGQG-----G 421 (543)
T ss_dssp ETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEECSC-----S
T ss_pred ECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEEcCC-----C
Confidence 9999876653333455554333332 22 256777654221 25778887762 377666554321 1
Q ss_pred CceEEEEEcCceEEEEEccCCCC--cCceEEEEECCCCC
Q 010551 298 LSVCSAIIEGEHHLVAFGGYNGK--YNNEVFVMRLKPRD 334 (507)
Q Consensus 298 ~~~~~~~~~~~~~l~v~GG~~~~--~~~~~~~~~~~~~~ 334 (507)
........+...+|++-.-.+.. ..+.|.+||+.+..
T Consensus 422 ~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 422 GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 12223344555677763311211 35689999998765
No 55
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.10 E-value=0.2 Score=53.97 Aligned_cols=236 Identities=9% Similarity=0.028 Sum_probs=119.9
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccc-cceEEE-E--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRY-KHAAAV-F--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADK 78 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~-~~~~~~-~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~ 78 (507)
.|+++||+....+..+......+.... ....+. . ++.|+|- .. ...+..||+.+..+.........
T Consensus 282 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWig-t~-----~~Gl~~~~~~~~~~~~~~~~~~~---- 351 (795)
T 4a2l_A 282 NDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLG-TY-----FGGLNYYHPIRNRFKNIRNIPYK---- 351 (795)
T ss_dssp SCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEE-ES-----SSCEEEECGGGGSSEEECCCTTS----
T ss_pred ChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEE-EC-----CCCeEEeCCCcccceEEcCCCCC----
Confidence 478899999999998864211111111 111111 1 4566653 21 13488999988877765432210
Q ss_pred cccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCC---C-CcCcEEEEE-CC
Q 010551 79 TEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV---T-RGGHSVTLV-GS 152 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~---~-r~~~~~~~~-~~ 152 (507)
...+...-.+++.- ++.|++ |... .-+..||+.++.+.........+. + ..-++++.- ++
T Consensus 352 -------~~l~~~~V~~i~~d~~g~lWi-Gt~~------~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 352 -------NSLSDNVVSCIVEDKDKNLWI-GTND------GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp -------SSCSCSSEEEEEECTTSCEEE-EESS------SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred -------CCCCCCeeEEEEECCCCCEEE-EECC------CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 11111112223322 456666 3221 128899999999887753210111 1 111233332 45
Q ss_pred E-EEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 153 R-LIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 153 ~-iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
. |++ |..+ +.+++||+.++++.......+......-.+++...++.|+|-.. +-+++||+.++.|
T Consensus 418 ~~lWi-gt~~------~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 418 SLVYI-GTHA------GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSF 483 (795)
T ss_dssp TEEEE-EETT------TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------SCEEEEETTTTEE
T ss_pred CEEEE-EeCc------CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------CceeEEeCCCCeE
Confidence 6 555 4321 34899999999888875421111111122223233455666322 3589999999999
Q ss_pred EecccCCC-CCCC-CCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEe
Q 010551 232 SQPEIKGD-LVTG-RAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 232 ~~~~~~~~-~p~~-r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v 284 (507)
........ ...+ ..-.+++.. ++.++|... ..+++||+.+..+ .+
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~ 531 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QK 531 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EE
Confidence 87642210 0111 111222222 356666432 1388999988887 44
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.08 E-value=0.077 Score=50.47 Aligned_cols=277 Identities=13% Similarity=0.107 Sum_probs=127.0
Q ss_pred CeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCC
Q 010551 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 83 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~ 83 (507)
+|.+|+.+.++..+...... .....+++- +++||+.+... ....+++||+.++.++.+......
T Consensus 20 v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~--------- 84 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAP--------- 84 (347)
T ss_dssp EEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEE---------
T ss_pred EEEEcCCCCeEEEeeeeecc---CCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecC---------
Confidence 67778888888776432112 112223332 66777765311 124699999988887766542210
Q ss_pred CcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECC-CCcEEEee---cCCCCCCCCcC---cEEEEE--CCE
Q 010551 84 LLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLE-TNLCGVME---TSGKVPVTRGG---HSVTLV--GSR 153 (507)
Q Consensus 84 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~---~~g~~p~~r~~---~~~~~~--~~~ 153 (507)
.....+.+..- +..||+.+.. ...+.+|++. ++....+. ..+..|.+|.. ...+.+ +++
T Consensus 85 -----~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 85 -----GTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp -----SCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred -----CCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 01112222222 3456665431 2347777774 44444332 22223322211 122333 456
Q ss_pred EEEEcCCCCCCCccCcEEEEECC-CCcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECC--CC
Q 010551 154 LIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQ--TN 229 (507)
Q Consensus 154 iy~~GG~~~~~~~~n~~~~~d~~-t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~--~~ 229 (507)
+|+.+.. .+.+.+||+. +++...+.... .+....-..++... ++++|+.+..+ +.+.+|++. ++
T Consensus 154 l~v~~~~------~~~v~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g 221 (347)
T 3hfq_A 154 LAVIDLG------SDKVYVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTG 221 (347)
T ss_dssp EEEEETT------TTEEEEEEECTTSCEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTT
T ss_pred EEEEeCC------CCEEEEEEECCCCcEEEeeeEE-cCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCC
Confidence 6665432 2468899987 56555432110 11111111233333 44577765432 345555544 56
Q ss_pred cEEecccCCCCCCC---CCccEEEEE--CC-eEEEEeccCCCCCcceEEEEECCC-CcEEEeccCCCCCCCCCCCCceEE
Q 010551 230 EWSQPEIKGDLVTG---RAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMTK-LAWSILTSVKGRNPLASEGLSVCS 302 (507)
Q Consensus 230 ~W~~~~~~~~~p~~---r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~d~~~-~~W~~v~~~~~~~~~~~~~~~~~~ 302 (507)
.+..+......|.. ......+.+ ++ .+|+.+.. .+.+.+|++.. ..+..+..++... ......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-----~~~v~v~~~~~~g~~~~~~~~~~~~-----~~~~~~ 291 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-----YNTLAVFAVTADGHLTLIQQISTEG-----DFPRDF 291 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET-----TTEEEEEEECGGGCEEEEEEEECSS-----SCCCEE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC-----CCEEEEEEECCCCcEEEeEEEecCC-----CCcCeE
Confidence 66544322222221 112222333 33 46666432 23577888753 3555544333210 111223
Q ss_pred EEEcCceEEEEEccCCCCcCceEEEE--ECCCC
Q 010551 303 AIIEGEHHLVAFGGYNGKYNNEVFVM--RLKPR 333 (507)
Q Consensus 303 ~~~~~~~~l~v~GG~~~~~~~~~~~~--~~~~~ 333 (507)
+..+++.+|++.+..+ +.+.+| |..+.
T Consensus 292 ~~spdg~~l~v~~~~~----~~v~v~~~d~~tg 320 (347)
T 3hfq_A 292 DLDPTEAFVVVVNQNT----DNATLYARDLTSG 320 (347)
T ss_dssp EECTTSSEEEEEETTT----TEEEEEEECTTTC
T ss_pred EECCCCCEEEEEEcCC----CcEEEEEEeCCCC
Confidence 3344455677654422 334445 55444
No 57
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.07 E-value=0.21 Score=47.20 Aligned_cols=239 Identities=11% Similarity=-0.037 Sum_probs=122.0
Q ss_pred CCEEEEEcCCCC-CccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCC
Q 010551 37 DQKLYIVGGSRN-GRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKS 113 (507)
Q Consensus 37 ~~~iyi~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~ 113 (507)
++.||+...... ......++++|+.++.-...-... .. -++++.. ++.+|+.++..
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-----------------~~-~~~~~~s~dg~~l~v~~~~~--- 110 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-----------------LK-PFGATINNTTQTLWFGNTVN--- 110 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-----------------SC-CCSEEEETTTTEEEEEETTT---
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-----------------CC-cceEEECCCCCEEEEEecCC---
Confidence 457777653211 112457999999887654332221 11 1223332 45677776532
Q ss_pred CCcceEEEEECCCCcEEEeecCCCCCCC-----CcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEecc-
Q 010551 114 SDSMIVRFIDLETNLCGVMETSGKVPVT-----RGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEV- 185 (507)
Q Consensus 114 ~~~~~~~~yd~~t~~W~~~~~~g~~p~~-----r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~- 185 (507)
..+++||+.+++-......+....+ ..-+.++.. ++.+|+.+... .+.+++||+.+.+-...-.
T Consensus 111 ---~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 111 ---SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp ---TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECC
T ss_pred ---CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecC
Confidence 3699999999875433322111110 001222332 34677665222 2459999998876443322
Q ss_pred CCCCCCCCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEecc
Q 010551 186 TQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGG 262 (507)
Q Consensus 186 ~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~ 262 (507)
.+ ...+.++.. +++.+|+... .+.+++||+.+++-......+..........++.. ++.+|+....
T Consensus 183 ~~-----~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 183 TG-----KMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp CC-----TTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred CC-----CccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 11 112233333 4455666543 24789999988765432211111111112223333 3456665432
Q ss_pred CCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 263 DNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
.+.+++||+.+.........+.. ......+.+..+|+.+.. .+.+.++|+...
T Consensus 252 -----~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~ 304 (353)
T 3vgz_A 252 -----AAEVLVVDTRNGNILAKVAAPES---------LAVLFNPARNEAYVTHRQ----AGKVSVIDAKSY 304 (353)
T ss_dssp -----SSEEEEEETTTCCEEEEEECSSC---------CCEEEETTTTEEEEEETT----TTEEEEEETTTT
T ss_pred -----CCEEEEEECCCCcEEEEEEcCCC---------ceEEECCCCCEEEEEECC----CCeEEEEECCCC
Confidence 24689999988765443332211 123344445567776542 357888888654
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.01 E-value=0.31 Score=48.11 Aligned_cols=226 Identities=16% Similarity=0.166 Sum_probs=114.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
.+.+++.|+.+ ..+.++|+.++.-...-... .....++.+++..++.|+.+
T Consensus 168 ~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~h------------------~~~v~~~~~~~~~l~s~s~d------ 218 (445)
T 2ovr_B 168 RDNIIISGSTD-----RTLKVWNAETGECIHTLYGH------------------TSTVRCMHLHEKRVVSGSRD------ 218 (445)
T ss_dssp ETTEEEEEETT-----SCEEEEETTTTEEEEEECCC------------------SSCEEEEEEETTEEEEEETT------
T ss_pred cCCEEEEEeCC-----CeEEEEECCcCcEEEEECCC------------------CCcEEEEEecCCEEEEEeCC------
Confidence 34566666643 45889999877533221110 11122333345556666543
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCc
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 196 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~ 196 (507)
..+.+||+.++.-..... .......++.+++..++.|+.++ .+.+||+.+.+-...-. ......
T Consensus 219 g~i~~wd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~-----~~~~~v 282 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLM-----GHVAAVRCVQYDGRRVVSGAYDF------MVKVWDPETETCLHTLQ-----GHTNRV 282 (445)
T ss_dssp SEEEEEESSSCCEEEEEE-----CCSSCEEEEEECSSCEEEEETTS------CEEEEEGGGTEEEEEEC-----CCSSCE
T ss_pred CEEEEEECCCCcEEEEEc-----CCcccEEEEEECCCEEEEEcCCC------EEEEEECCCCcEeEEec-----CCCCce
Confidence 348899998876433221 11122334445777777777653 58899987765332211 111122
Q ss_pred eEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEEC
Q 010551 197 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNM 276 (507)
Q Consensus 197 ~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~ 276 (507)
..+.+++. .++.|+.+ +.+.+||+.++.-...- .+ ..........++..++.|+.++ .+.+||+
T Consensus 283 ~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~-~~----~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~ 346 (445)
T 2ovr_B 283 YSLQFDGI-HVVSGSLD-----TSIRVWDVETGNCIHTL-TG----HQSLTSGMELKDNILVSGNADS-----TVKIWDI 346 (445)
T ss_dssp EEEEECSS-EEEEEETT-----SCEEEEETTTCCEEEEE-CC----CCSCEEEEEEETTEEEEEETTS-----CEEEEET
T ss_pred EEEEECCC-EEEEEeCC-----CeEEEEECCCCCEEEEE-cC----CcccEEEEEEeCCEEEEEeCCC-----eEEEEEC
Confidence 33344455 56666654 35889999887644321 11 1112223334566677776443 4788998
Q ss_pred CCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCC
Q 010551 277 TKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 277 ~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 334 (507)
.+..-... +.... . .......+..++ .+++.|+.+ ..+.++|+....
T Consensus 347 ~~~~~~~~--~~~~~--~-~~~~v~~~~~~~--~~l~s~~~d----g~v~iwd~~~~~ 393 (445)
T 2ovr_B 347 KTGQCLQT--LQGPN--K-HQSAVTCLQFNK--NFVITSSDD----GTVKLWDLKTGE 393 (445)
T ss_dssp TTCCEEEE--ECSTT--S-CSSCEEEEEECS--SEEEEEETT----SEEEEEETTTCC
T ss_pred CCCcEEEE--EccCC--C-CCCCEEEEEECC--CEEEEEeCC----CeEEEEECCCCc
Confidence 77653221 11100 0 011122223333 355566644 467788876553
No 59
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.97 E-value=0.16 Score=53.59 Aligned_cols=129 Identities=16% Similarity=0.137 Sum_probs=74.7
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCCccccCCCcCCCCC---ccceeEEEECCEEEE
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPP---MSDHCMVKWGTKLLI 105 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~---r~~~~~~~~~~~lyv 105 (507)
.+.++.++.||+... .+.++.+|..+++ |+.-...... ..+.. ....+.+..++.||+
T Consensus 71 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-----------~~~~~~~~~~~~~~a~~~~~v~v 133 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRS-----------TGFKGCCDVVNRGVALWKGKVYV 133 (677)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGG-----------GGGGSSSCSCCCCCEEETTEEEE
T ss_pred eCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCcc-----------ccccccccCCCCCceEECCEEEE
Confidence 445667999999875 3579999998875 8764432110 00000 112345567888888
Q ss_pred EeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc--EE
Q 010551 106 LGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WD 181 (507)
Q Consensus 106 ~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~ 181 (507)
... ...++.+|..|++ |+.-.............+.++.++.+|+-.+.. .......++.||..+++ |+
T Consensus 134 ~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~-~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 134 GAW-------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGA-EYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ECT-------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCT-TTCCBCEEEEEETTTCCEEEE
T ss_pred EcC-------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccc-ccCCCCEEEEEECCCCcEEEE
Confidence 643 2359999999886 876431001111112223445677776643322 11234679999998875 87
Q ss_pred Eec
Q 010551 182 AVE 184 (507)
Q Consensus 182 ~~~ 184 (507)
.-.
T Consensus 206 ~~~ 208 (677)
T 1kb0_A 206 WFS 208 (677)
T ss_dssp EES
T ss_pred ecc
Confidence 654
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.97 E-value=0.24 Score=46.18 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=112.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..++.....-... ......+.+ ++.+++.|+.+
T Consensus 34 ~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~l~s~~~d---- 86 (312)
T 4ery_A 34 NGEWLASSSAD-----KLIKIWGAYDGKFEKTISGH------------------KLGISDVAWSSDSNLLVSASDD---- 86 (312)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEEECCC------------------SSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEeeCC-----CeEEEEeCCCcccchhhccC------------------CCceEEEEEcCCCCEEEEECCC----
Confidence 45566666643 35888898877654432211 111222333 45666666643
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
..+.+||+.++.-...-. + ......++.+ ++.+++.|+.++ .+.+||+.+.+-...-.. ..
T Consensus 87 --~~i~vwd~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~----~~ 149 (312)
T 4ery_A 87 --KTLKIWDVSSGKCLKTLK-G----HSNYVFCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKTLPA----HS 149 (312)
T ss_dssp --SEEEEEETTTCCEEEEEE-C----CSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEEECC----CS
T ss_pred --CEEEEEECCCCcEEEEEc-C----CCCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEEecC----CC
Confidence 348899998876433221 1 1111222333 346667777653 489999987764332110 01
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcce
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~ 270 (507)
..-.++....++.+++.|+.+ ..+.+||+.+.+......... ......+.+ ++..++.|+.++ .
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d~-----~ 215 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDDD----NPPVSFVKFSPNGKYILAATLDN-----T 215 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCSS----CCCEEEEEECTTSSEEEEEETTT-----E
T ss_pred CcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeeEEeccC----CCceEEEEECCCCCEEEEEcCCC-----e
Confidence 111122223345567777654 358899998776443211011 011122222 456666666433 5
Q ss_pred EEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 271 TIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 271 ~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
+.+||+.+..-... +..... .. .........++ ..+++.|+.+ ..+.++|+...
T Consensus 216 i~iwd~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~-~~~l~sg~~d----g~i~vwd~~~~ 269 (312)
T 4ery_A 216 LKLWDYSKGKCLKT--YTGHKN-EK-YCIFANFSVTG-GKWIVSGSED----NLVYIWNLQTK 269 (312)
T ss_dssp EEEEETTTTEEEEE--ECSSCC-SS-SCCCEEEECSS-SCEEEECCTT----SCEEEEETTTC
T ss_pred EEEEECCCCcEEEE--EEecCC-ce-EEEEEEEEeCC-CcEEEEECCC----CEEEEEECCCc
Confidence 78899887653322 111110 00 11111222222 3456667755 45777787544
No 61
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.91 E-value=0.31 Score=46.93 Aligned_cols=205 Identities=7% Similarity=-0.025 Sum_probs=97.3
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r 193 (507)
...++++|+.++....+... + ....+....- ++ .|++... +........++.+|+.+..+..+... .+ ..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~---~-~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~~--~~-~~ 238 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD---T-AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKEH--AE-GE 238 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE---S-SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSCC--CT-TE
T ss_pred cceEEEEECCCCcEEeeccC---C-cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeecc--CC-Cc
Confidence 45799999999987766521 1 1111112222 23 4554432 22111235799999988877766431 01 11
Q ss_pred CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCC--------
Q 010551 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDN-------- 264 (507)
Q Consensus 194 ~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~-------- 264 (507)
.........++..+++...........++++|+.++....+.. .+. .. ....- +++++++.+...
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MPP--CS-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CCS--EE-EEEECSSSSEEEEEECCC--------
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CCC--CC-CCccCCCCceEEEecCCcceeecccc
Confidence 1111222234333333332222222349999999887766532 111 11 22222 566666644221
Q ss_pred ---CCCcceEEEEECCCCcEEEeccCCCCCC---CCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCCCC
Q 010551 265 ---NNGCQETIVLNMTKLAWSILTSVKGRNP---LASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 336 (507)
Q Consensus 265 ---~~~~~~~~~~d~~~~~W~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w~ 336 (507)
......++++|+.+.....+...+.... ..+..........+.+..|+...... ....+|.+++....+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~--~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE--GVPAIYIADVPESYKH 388 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT--SSCEEEEEECCTTCC-
T ss_pred ccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC--CCceEEEEEEcccccc
Confidence 1123579999998887666543322100 00000011112223334554444322 2457999998766544
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.11 Score=49.60 Aligned_cols=191 Identities=10% Similarity=0.068 Sum_probs=97.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--C--CEEEEEeccCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.+||+...++..+...... ......+.+ + +.+++.|+.+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~~l~s~~~dg- 79 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASCSYDG- 79 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECCGGGCSEEEEEETTS-
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCC----------------CCcEEEEEeCCCCCCCEEEEeccCC-
Confidence 45566666643 3588999887777665543210 112223333 2 56666666532
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--C--CEEEEEcCCCCCCCccCcEEEEECCCCcE-EEeccCC
Q 010551 113 SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETMTW-DAVEVTQ 187 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~iy~~GG~~~~~~~~n~~~~~d~~t~~W-~~~~~~~ 187 (507)
.+.+||+.++.|..+... ........++.+ + +.+++.|+.+ ..+.+||+.+..- ......+
T Consensus 80 -----~v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 80 -----KVLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp -----CEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEEC
T ss_pred -----EEEEEEcCCCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecC
Confidence 388899999988766532 212222333333 2 5567777654 3588888876532 1111100
Q ss_pred CCCCCCCCceEEEEc-------------CCEEEEEcCCCCCCCCCcEEEEECCCCc--EEecccCCCCCCCCCc-cEEEE
Q 010551 188 TPPAPRYDHSAALHA-------------NRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAG-HAGIT 251 (507)
Q Consensus 188 ~~p~~r~~~~~~~~~-------------~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~-~~~~~ 251 (507)
. ...-.+++... ++.+++.|+.++ .+.+||+.+.. +...... ...... .+++.
T Consensus 146 ~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~---~~h~~~v~~~~~ 214 (379)
T 3jrp_A 146 H---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAW 214 (379)
T ss_dssp C---TTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEE
T ss_pred C---CCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEE---ecccCcEeEEEE
Confidence 0 11111222222 345777777543 57788876543 4332111 111111 12222
Q ss_pred E-C---CeEEEEeccCCCCCcceEEEEECCCC
Q 010551 252 I-D---ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 252 ~-~---~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
. + +.+++.|+.++ .+.+||+.+.
T Consensus 215 sp~~~~~~~l~s~~~dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDR-----TCIIWTQDNE 241 (379)
T ss_dssp CCCCSSSEEEEEEETTS-----CEEEEEESST
T ss_pred CCCCCCCCeEEEEeCCC-----EEEEEeCCCC
Confidence 2 3 56777777544 3667777665
No 63
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.90 E-value=0.064 Score=51.86 Aligned_cols=210 Identities=10% Similarity=-0.023 Sum_probs=94.5
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~ 194 (507)
...++++|+.++.-..+... + ....+....- +++.+++............++.+|+.+.....+... .....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~---~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQE---N-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH---AEGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEE---S-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC---CTTEE
T ss_pred cceEEEEECCCCceEEeecC---C-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC---CCCcc
Confidence 46799999999986666421 1 1122222222 344333333222222245799999988776665421 10011
Q ss_pred CceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCC---CCCCccEEEEECCeEEEEec---cCCCCC
Q 010551 195 DHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV---TGRAGHAGITIDENWYIVGG---GDNNNG 267 (507)
Q Consensus 195 ~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p---~~r~~~~~~~~~~~l~v~GG---~~~~~~ 267 (507)
....+...+ +.|+..... .......++++|+.++.-..+....... ......+...-+..+++... ......
T Consensus 240 ~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYL-KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred cccceECCCCCEEEEEecC-CCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 111222233 334333222 1111124999999998866543211100 00001111222233333210 001123
Q ss_pred cceEEEEECCCCcEEEeccCCCCCCC---CCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCCC
Q 010551 268 CQETIVLNMTKLAWSILTSVKGRNPL---ASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 268 ~~~~~~~d~~~~~W~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w 335 (507)
...++++|+.+.....+......... .+..........+++..|+...... ....+|.+++....|
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~--g~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH--GKPALYLATLPESVW 387 (388)
T ss_dssp CCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT--SSCEEEEEECCGGGG
T ss_pred CCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCC--CceeEEEEECChhcc
Confidence 45799999999887776544321000 0000111122233444555544333 245799999876544
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.88 E-value=0.36 Score=46.90 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=112.0
Q ss_pred CceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEE
Q 010551 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 130 (507)
Q Consensus 53 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~ 130 (507)
..+.+||..++.......... ......+.+ ++.+++.|+.++ .+.+||+.++.-.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~-----------------~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~ 169 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDE-----------------STYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKL 169 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCT-----------------TCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEE
T ss_pred CeEEEeeCCCCcEeEeeecCC-----------------CCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEE
Confidence 469999999887665443211 111223333 455666666432 3889999888654
Q ss_pred EeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEc
Q 010551 131 VMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 210 (507)
.... .......++..++.+++.|+.+ ..+.++|+.+..-......+ ....-.++....++.+++.|
T Consensus 170 ~~~~-----~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 170 RTMA-----GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQG---HSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EEEC-----CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEE
T ss_pred EEec-----CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcC---CCCCeeEEEEcCCCCEEEEE
Confidence 4321 1122233344466677777754 35889998743322111111 11112223333355577777
Q ss_pred CCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCC
Q 010551 211 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~ 288 (507)
+.+ +.+.+||+.+..-.... .. ....-.+++.. +..+++.||+..+ ..+.+||+.+..-.......
T Consensus 236 ~~d-----~~v~iwd~~~~~~~~~~--~~--~~~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~~~~~~~~~~ 303 (401)
T 4aez_A 236 GND-----NVVQIWDARSSIPKFTK--TN--HNAAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATGARVNTVDAG 303 (401)
T ss_dssp ETT-----SCEEEEETTCSSEEEEE--CC--CSSCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTCCEEEEEECS
T ss_pred eCC-----CeEEEccCCCCCccEEe--cC--CcceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCCCEEEEEeCC
Confidence 754 36889999876543321 01 11111233332 3467777753222 25889998876543322111
Q ss_pred CCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 289 GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
....+....+....|++.+|.. ...+.++++..
T Consensus 304 --------~~v~~~~~s~~~~~l~~~~g~~---dg~i~v~~~~~ 336 (401)
T 4aez_A 304 --------SQVTSLIWSPHSKEIMSTHGFP---DNNLSIWSYSS 336 (401)
T ss_dssp --------SCEEEEEECSSSSEEEEEECTT---TCEEEEEEEET
T ss_pred --------CcEEEEEECCCCCeEEEEeecC---CCcEEEEecCC
Confidence 1122233334455666665543 24566666644
No 65
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=96.88 E-value=0.024 Score=48.22 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=33.5
Q ss_pred HHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 430 SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 430 ~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
++++...+...+.++.++.+||+..-.++++.+... +++.+..++..+..-++.++++..
T Consensus 94 q~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~EKe 157 (189)
T 2v71_A 94 EDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKE 157 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444445555555555555555554443 566666666666667777766544
No 66
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.85 E-value=0.11 Score=49.06 Aligned_cols=160 Identities=16% Similarity=0.085 Sum_probs=78.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+|+.++. .+.++++|+.++.....-..+.. ..-+.++.. ++.+|+.+..
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~----------------~~~~~~~~s~dg~~~~v~~~~----- 63 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDK----------------FGPGTAMMAPDNRTAYVLNNH----- 63 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSC----------------CSSCEEEECTTSSEEEEEETT-----
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCC----------------CCCceeEECCCCCEEEEEeCC-----
Confidence 5678887763 35699999998865443222110 011222222 3457777532
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCC--CCcCcEEEEE-CC-EEEEEcCC--CCCCC---ccCcEEEEECCCCcEEEecc
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPV--TRGGHSVTLV-GS-RLIIFGGE--DRSRK---LLNDVHFLDLETMTWDAVEV 185 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~--~r~~~~~~~~-~~-~iy~~GG~--~~~~~---~~n~~~~~d~~t~~W~~~~~ 185 (507)
...+++||+.+++-......+..|. ...-+.++.. ++ .+|+.+.. ..... ..+.+++||+.+++-.....
T Consensus 64 -~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 142 (349)
T 1jmx_B 64 -YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 142 (349)
T ss_dssp -TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred -CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee
Confidence 3459999999987654332211110 1111222222 34 55554321 00000 12579999988743211110
Q ss_pred CCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 186 TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 186 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
. .+.++...+++...++.+|+.++ +++++|+.+++...
T Consensus 143 ~--~~~~~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 143 T--FPMPRQVYLMRAADDGSLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp E--EECCSSCCCEEECTTSCEEEESS--------SEEEECTTTCCEEE
T ss_pred e--ccCCCcccceeECCCCcEEEccC--------cEEEEeCCCCceec
Confidence 0 11122333444444555776432 48899988776543
No 67
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.84 E-value=0.088 Score=56.06 Aligned_cols=147 Identities=10% Similarity=-0.021 Sum_probs=69.4
Q ss_pred cEEEEECCC-CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCC-CCCCc
Q 010551 169 DVHFLDLET-MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV-TGRAG 246 (507)
Q Consensus 169 ~~~~~d~~t-~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p-~~r~~ 246 (507)
.++++|+.+ .+-..+... .........++. .++..++++..+......+++++|+.++....+....... .....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred EEEEEECCCCCceEEecCC--CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 688889888 776555321 011111122233 3433444443322233457999999998876643211100 00011
Q ss_pred cEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEE-EEcCceEEEEEccCCCCcCceE
Q 010551 247 HAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSA-IIEGEHHLVAFGGYNGKYNNEV 325 (507)
Q Consensus 247 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~l~v~GG~~~~~~~~~ 325 (507)
.....-++++++.++.+ ....+|.+|.... ...+.... ....... ..+++..|+..+..++.....+
T Consensus 341 ~~~~spdg~~~~~~~~~---g~~~l~~~~~~~~-~~~l~~~~--------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERT---GFQHLYRIDSKGK-AAALTHGN--------WSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp CCEECTTSCEEEEECTT---SSCEEEEECSSSC-EEESCCSS--------SCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred ceEECCCCeEEEEecCC---CccEEEEEcCCCC-eeeeeecc--------eEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 11122255665555432 3467899987766 55553221 1111121 3333445555554333334456
Q ss_pred EEEEC
Q 010551 326 FVMRL 330 (507)
Q Consensus 326 ~~~~~ 330 (507)
|.++.
T Consensus 409 ~~~~~ 413 (741)
T 2ecf_A 409 YAVPL 413 (741)
T ss_dssp EEEET
T ss_pred EEEEc
Confidence 66665
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.84 E-value=0.31 Score=45.44 Aligned_cols=187 Identities=16% Similarity=0.068 Sum_probs=94.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++..++.|+.+ ..+.+||+.++....... .........++.+ ++..++.|+.+ +.+.+||+.+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCC
Confidence 45566666543 358999999887544331 1111112223333 45666667654 3589999988
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeE
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENW 256 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l 256 (507)
.+....-. .......+++...++..++.|+.+ ..+.+||+.+..-..... .+....+++.. ++..
T Consensus 173 ~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~-----~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 173 QTLVRQFQ----GHTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHD-----FTSQIFSLGYCPTGEW 238 (337)
T ss_dssp TEEEEEEC----CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEE-----CSSCEEEEEECTTSSE
T ss_pred Cceeeeee----cccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeec-----CCCceEEEEECCCCCE
Confidence 76443321 011112223333344466666643 368999998876443211 11111222222 4566
Q ss_pred EEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 257 YIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 257 ~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
+++|+.++ .+.+||+.+..-..+.... . ....+....+..+++.|+.+ ..+.++++...
T Consensus 239 l~~~~~~~-----~i~~~~~~~~~~~~~~~~~--------~-~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~ 297 (337)
T 1gxr_A 239 LAVGMESS-----NVEVLHVNKPDKYQLHLHE--------S-CVLSLKFAYCGKWFVSTGKD----NLLNAWRTPYG 297 (337)
T ss_dssp EEEEETTS-----CEEEEETTSSCEEEECCCS--------S-CEEEEEECTTSSEEEEEETT----SEEEEEETTTC
T ss_pred EEEEcCCC-----cEEEEECCCCCeEEEcCCc--------c-ceeEEEECCCCCEEEEecCC----CcEEEEECCCC
Confidence 77766433 4788998877644332211 1 12223333333345556644 45777887654
No 69
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.82 E-value=0.077 Score=50.77 Aligned_cols=233 Identities=12% Similarity=0.112 Sum_probs=112.8
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE--C--CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCC
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--D--QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDAD 77 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~--~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~ 77 (507)
|..+.++|+....+..+.. .......-.++.. + +.+++.|+.+ ..+.++|+.++.|..+......
T Consensus 32 dg~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~--- 100 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWSQIAVHAVH--- 100 (379)
T ss_dssp TSCEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEEEEEEEECCC---
T ss_pred CCcEEEEecCCCcceeeeE---ecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCceeEeeeecCC---
Confidence 3445666666555555442 1111111122222 2 5666777643 3589999999988766544311
Q ss_pred ccccCCCcCCCCCccceeEEEE--C--CEEEEEeccCCCCCCcceEEEEECCCCcE-EEeecCCCCCCCCcCcEEEEE--
Q 010551 78 KTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKKSSDSMIVRFIDLETNLC-GVMETSGKVPVTRGGHSVTLV-- 150 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~-- 150 (507)
......+.+ + +.+++.|+.+ ..+.+||+.+..- ......+ ......++.+
T Consensus 101 -------------~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~----~~~~v~~~~~~~ 157 (379)
T 3jrp_A 101 -------------SASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA----HAIGVNSASWAP 157 (379)
T ss_dssp -------------SSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEEC----CTTCEEEEEECC
T ss_pred -------------CcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecC----CCCceEEEEEcC
Confidence 112223333 2 4566666643 2488888877632 1111100 0111112222
Q ss_pred -------------CCEEEEEcCCCCCCCccCcEEEEECCCCc--EEEeccCCCCCCCCCCceEEEEcC---CEEEEEcCC
Q 010551 151 -------------GSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHAN---RYLIVFGGC 212 (507)
Q Consensus 151 -------------~~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~---~~l~v~GG~ 212 (507)
++.+++.|+.++ .+.+||+.+.. +..+..... ....-.+++...+ +.+++.|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp CC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEET
T ss_pred ccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeC
Confidence 356777777653 47888875543 444332110 1111223333344 567777776
Q ss_pred CCCCCCCcEEEEECCCCc--EEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECC-CCcEEEeccC
Q 010551 213 SHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSV 287 (507)
Q Consensus 213 ~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~-~~~W~~v~~~ 287 (507)
++ .+.+||+.+.. +.... .........-.+++.. ++.++++|+.++ .+.+||+. ...|..+..+
T Consensus 230 dg-----~i~iwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 230 DR-----TCIIWTQDNEQGPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp TS-----CEEEEEESSTTSCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEESSS-----SEEEEEEEETTEEEEEEEE
T ss_pred CC-----EEEEEeCCCCCccceeee-eccccCCCcEEEEEEcCCCCEEEEecCCC-----cEEEEeCCCCCccccccce
Confidence 53 57888887653 11110 0111111111122222 456666666433 36677766 4578776544
No 70
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.80 E-value=0.12 Score=47.11 Aligned_cols=229 Identities=10% Similarity=0.005 Sum_probs=112.6
Q ss_pred CCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCC-CcEE
Q 010551 52 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLET-NLCG 130 (507)
Q Consensus 52 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t-~~W~ 130 (507)
...++++|+.++....+.... .........-+++.+++++ ...++++|+.+ +...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----------------~~v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----------------ELFEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----------------SCCEEEEECTTSSEEEEEE-------TTEEEEEESSSCCSCE
T ss_pred ceeEEEEeCCCCceeeeccCC-----------------cceEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCCce
Confidence 467999999988876554321 1111111222455555554 12599999999 8766
Q ss_pred EeecCCCCCC-CCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEc-CCEEEE
Q 010551 131 VMETSGKVPV-TRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIV 208 (507)
Q Consensus 131 ~~~~~g~~p~-~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v 208 (507)
.+.. .+. ......+..-+++.+++++.... ....++.+++.+..-..+.... . ...+.... ++.+++
T Consensus 77 ~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~----~--~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 77 KVDT---GFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNL----P--SYWHGWSPDGKSFTY 145 (297)
T ss_dssp ECCC---TTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSS----S--EEEEEECTTSSEEEE
T ss_pred Eecc---ccccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCC----C--ccceEECCCCCEEEE
Confidence 5541 121 11111122224555555553322 2467999998877755553211 1 22223333 344554
Q ss_pred EcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccC
Q 010551 209 FGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 209 ~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~ 287 (507)
.++.++. ..+|.+++.+.....+.. .+ .....+... ++..+++++.. .....+|.+++.......+...
T Consensus 146 ~~~~~~~---~~l~~~~~~~~~~~~~~~---~~--~~~~~~~~s~dg~~l~~~~~~--~~~~~i~~~~~~~~~~~~~~~~ 215 (297)
T 2ojh_A 146 CGIRDQV---FDIYSMDIDSGVETRLTH---GE--GRNDGPDYSPDGRWIYFNSSR--TGQMQIWRVRVDGSSVERITDS 215 (297)
T ss_dssp EEEETTE---EEEEEEETTTCCEEECCC---SS--SCEEEEEECTTSSEEEEEECT--TSSCEEEEEETTSSCEEECCCC
T ss_pred EECCCCc---eEEEEEECCCCcceEccc---CC--CccccceECCCCCEEEEEecC--CCCccEEEECCCCCCcEEEecC
Confidence 4443221 367888887777665421 11 111122222 44444444321 1245788888877776665432
Q ss_pred CCCCCCCCCCCceEEEEE-cCceEEEEEccCCCC------cCceEEEEECCCCC
Q 010551 288 KGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGK------YNNEVFVMRLKPRD 334 (507)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~------~~~~~~~~~~~~~~ 334 (507)
. .....+.. +.+..|++.+...+. ....++++|+....
T Consensus 216 ~---------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 216 A---------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp S---------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred C---------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 1 11222233 334444443332111 23568999987653
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.76 E-value=0.096 Score=51.54 Aligned_cols=260 Identities=13% Similarity=0.097 Sum_probs=119.5
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~ 79 (507)
|.-++++|..+++-..+-. .......-.++.. ++.+++.|+.+ ..+.++|+.++.-.......
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~~~h------- 188 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSH------- 188 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCC-------
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEeCC-------
Confidence 5567788888887766542 1111111112222 56677777644 35889999876543222111
Q ss_pred ccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEE
Q 010551 80 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~ 157 (507)
.....++..++.+++.|+.+ ..+..+|..+.........+. ......... ++..++.
T Consensus 189 -----------~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h----~~~~~~~~~~~~g~~l~s 247 (420)
T 4gga_A 189 -----------SARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGH----SQEVCGLRWAPDGRHLAS 247 (420)
T ss_dssp -----------SSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEE
T ss_pred -----------CCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccc----ccceeeeeecCCCCeeee
Confidence 12233445566677777653 247777776654333221111 111122222 3455566
Q ss_pred cCCCCCCCccCcEEEEECCCCcE--EEeccCCCCCCCCCCceEEEE---cCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 158 GGEDRSRKLLNDVHFLDLETMTW--DAVEVTQTPPAPRYDHSAALH---ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 158 GG~~~~~~~~n~~~~~d~~t~~W--~~~~~~~~~p~~r~~~~~~~~---~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
|+.+ +.+.++|..+..- ..+... ........+... ..+.+++.||..+ ..|.+||+.++.-.
T Consensus 248 ~~~D------~~v~i~~~~~~~~~~~~~~~~---~~~~~~V~~~~~~p~~~~~la~~~gs~D----~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 248 GGND------NLVNVWPSAPGEGGWVPLQTF---TQHQGAVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACL 314 (420)
T ss_dssp EETT------SCEEEEESSCCSSCSCCSEEE---CCCSSCEEEEEECTTCTTEEEEEECTTT----CEEEEEETTTTEEE
T ss_pred eecc------ccceEEeeccccccceeeeee---cccCCceeeeeeCCCcccEEEEEeecCC----CEEEEEeCCccccc
Confidence 6654 3477777765431 111100 001111111111 2343444445432 25888999887655
Q ss_pred ecccCCCCCCCCCccEEEEE-C-CeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceE
Q 010551 233 QPEIKGDLVTGRAGHAGITI-D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH 310 (507)
Q Consensus 233 ~~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (507)
...... ....+++.. + +.+++.+|... ..+.+||..+.. .+..+.+.. +...+ +.+..+..
T Consensus 315 ~~~~~~-----~~v~~~~~~~~~~~lv~~sg~~d----~~I~iwd~~~~~--~v~~l~gH~-----~~V~~-l~~spdg~ 377 (420)
T 4gga_A 315 SAVDAH-----SQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMA--KVAELKGHT-----SRVLS-LTMSPDGA 377 (420)
T ss_dssp EEEECS-----SCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCC--EEEEECCCS-----SCEEE-EEECTTSS
T ss_pred eeeccc-----cceeeeeecCCCCeEEEEEecCC----CEEEEEECCCCc--EEEEEcCCC-----CCEEE-EEEcCCCC
Confidence 432111 111122222 3 34544445322 247888887654 333332211 11222 23333334
Q ss_pred EEEEccCCCCcCceEEEEECC
Q 010551 311 LVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 311 l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+++.||.++ .+.++|+.
T Consensus 378 ~l~S~s~D~----tvriWdv~ 394 (420)
T 4gga_A 378 TVASAAADE----TLRLWRCF 394 (420)
T ss_dssp CEEEEETTT----EEEEECCS
T ss_pred EEEEEecCC----eEEEEECC
Confidence 556677553 45555553
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.74 E-value=0.22 Score=47.40 Aligned_cols=150 Identities=11% Similarity=0.091 Sum_probs=77.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 115 (507)
++.+++.|+.+ ..+.+||+.++.+..+...... ...-.+++.. ++.+++.|+.+
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~l~~~~~d----- 73 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEH---------------NGQVTGVDWAPDSNRIVTCGTD----- 73 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECC---------------SSCEEEEEEETTTTEEEEEETT-----
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCC---------------CCcccEEEEeCCCCEEEEEcCC-----
Confidence 55666777643 4699999999877665543211 0111122222 45566666643
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCc-EEEeccCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~-W~~~~~~~~~p~~ 192 (507)
..+.+||+.++.+...... ........++.+ ++..++.|+.+ +.+.+||+.+.. |...... ..+..
T Consensus 74 -g~i~vwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~-~~~~~ 142 (372)
T 1k8k_C 74 -RNAYVWTLKGRTWKPTLVI---LRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHI-KKPIR 142 (372)
T ss_dssp -SCEEEEEEETTEEEEEEEC---CCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEE-CTTCC
T ss_pred -CeEEEEECCCCeeeeeEEe---ecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeee-ecccC
Confidence 2388899988887655421 111222233333 45666677654 247777765543 3322211 01111
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECC
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~ 227 (507)
..-.+++...++.+++.|+.+ ..+.+||+.
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~ 172 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCD-----FKCRIFSAY 172 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEECC
T ss_pred CCeeEEEEcCCCCEEEEEcCC-----CCEEEEEcc
Confidence 122233333455567777654 357888864
No 73
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.73 E-value=0.43 Score=45.51 Aligned_cols=114 Identities=7% Similarity=-0.003 Sum_probs=53.5
Q ss_pred CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CC-eEEEEeccCCCCCcceEEEEEC--C
Q 010551 203 NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNM--T 277 (507)
Q Consensus 203 ~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~d~--~ 277 (507)
++.+|+.+.. .+.+.+||+.++.+..+......+........+.+ ++ .+|+..... .+.+.+|++ .
T Consensus 222 g~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~~~ 292 (361)
T 3scy_A 222 GKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVDET 292 (361)
T ss_dssp SSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEECTT
T ss_pred CCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEcCC
Confidence 3457765532 24688999888877554332222222222233333 34 455543220 124556555 5
Q ss_pred CCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 278 KLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 278 ~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
+..++.+...+.. ..-......+.+.+|++.+..++ .-.+|.+|+.+.
T Consensus 293 ~g~~~~~~~~~~g------~~~~~~~~spdg~~l~~~~~~~~--~v~v~~~d~~~g 340 (361)
T 3scy_A 293 NGTLTKVGYQLTG------IHPRNFIITPNGKYLLVACRDTN--VIQIFERDQATG 340 (361)
T ss_dssp TCCEEEEEEEECS------SCCCEEEECTTSCEEEEEETTTT--EEEEEEECTTTC
T ss_pred CCcEEEeeEecCC------CCCceEEECCCCCEEEEEECCCC--CEEEEEEECCCC
Confidence 6676665544321 11122333444556766543221 223455665544
No 74
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.72 E-value=0.23 Score=52.75 Aligned_cols=253 Identities=10% Similarity=0.025 Sum_probs=125.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCC--
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKK-- 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~-- 112 (507)
+++.++++....+.....++++|+.++......... .. .+.+.+ +++.++++.....
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-----------------~~--~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-----------------VK--FSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-----------------EC--SCCEEECTTSSEEEEEECCCCSS
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-----------------cc--cceEEEEeCCCEEEEEEECCccc
Confidence 555555543333333347999999999876643211 01 122222 4443333333221
Q ss_pred --------CCCcceEEEEECCCCcEE-EeecCCCCCCCCcCcEEEE-ECC-EEEEEcCCCCCCCccCcEEEEECCC----
Q 010551 113 --------SSDSMIVRFIDLETNLCG-VMETSGKVPVTRGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLET---- 177 (507)
Q Consensus 113 --------~~~~~~~~~yd~~t~~W~-~~~~~g~~p~~r~~~~~~~-~~~-~iy~~GG~~~~~~~~n~~~~~d~~t---- 177 (507)
......++++++.++.-. .+...+. ..+........ -++ .|++....... ..++++.+|+.+
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~--~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP-DEPKWMGGAELSDDGRYVLLSIREGCD--PVNRLWYCDLQQESNG 272 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT-TCTTCEEEEEECTTSCEEEEEEECSSS--SCCEEEEEEGGGSSSS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccC-CCCeEEEEEEEcCCCCEEEEEEEccCC--CccEEEEEECcccccc
Confidence 012456999999887643 1111111 11111122222 234 45544332211 256899999876
Q ss_pred --C--cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC---cEEecccCCCCCCCCCccEEE
Q 010551 178 --M--TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAGI 250 (507)
Q Consensus 178 --~--~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~ 250 (507)
. .+..+.... .........+++.||+.+..+ .....|+.+|+.+. .|..+.. ..+. .....+.
T Consensus 273 ~~~~~~~~~l~~~~-----~~~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~--~~~~-~~~~~~~ 342 (710)
T 2xdw_A 273 ITGILKWVKLIDNF-----EGEYDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLVP--EHEK-DVLEWVA 342 (710)
T ss_dssp SCSSCCCEEEECSS-----SSCEEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEEC--CCSS-CEEEEEE
T ss_pred cCCccceEEeeCCC-----CcEEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceeccC--CCCC-CeEEEEE
Confidence 4 577775321 111223444567788776543 22357999999876 4777632 1111 1122334
Q ss_pred EE-CCeEEEEeccCCCCCcceEEEEECCCCc-EEEeccCCCCCCCCCCCCceEEEEEcCceEE-EEEccCCCCcCceEEE
Q 010551 251 TI-DENWYIVGGGDNNNGCQETIVLNMTKLA-WSILTSVKGRNPLASEGLSVCSAIIEGEHHL-VAFGGYNGKYNNEVFV 327 (507)
Q Consensus 251 ~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~-W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l-~v~GG~~~~~~~~~~~ 327 (507)
.. ++.+++....+ ....++++|+.++. ...+... .+........+....+ +.+.+ ......+|.
T Consensus 343 ~~~~~~lv~~~~~~---g~~~l~~~~~~~g~~~~~l~~~--------~~~v~~~~~s~d~~~l~~~~ss--~~~P~~i~~ 409 (710)
T 2xdw_A 343 CVRSNFLVLCYLHD---VKNTLQLHDLATGALLKIFPLE--------VGSVVGYSGQKKDTEIFYQFTS--FLSPGIIYH 409 (710)
T ss_dssp EETTTEEEEEEEET---TEEEEEEEETTTCCEEEEECCC--------SSEEEEEECCTTCSEEEEEEEC--SSCCCEEEE
T ss_pred EEcCCEEEEEEEEC---CEEEEEEEECCCCCEEEecCCC--------CceEEEEecCCCCCEEEEEEeC--CCCCCEEEE
Confidence 44 56666665432 24568999985554 4444321 1222222122222333 33333 344678999
Q ss_pred EECCCCC
Q 010551 328 MRLKPRD 334 (507)
Q Consensus 328 ~~~~~~~ 334 (507)
+|+.+..
T Consensus 410 ~d~~tg~ 416 (710)
T 2xdw_A 410 CDLTKEE 416 (710)
T ss_dssp EETTSSS
T ss_pred EECCCCc
Confidence 9987654
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.71 E-value=0.55 Score=46.46 Aligned_cols=146 Identities=11% Similarity=0.123 Sum_probs=75.8
Q ss_pred ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 150 VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 150 ~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
.++.+++.|+.++ .+.+||+.+.+-...-. .....-.+++...++..++.|+.+ +.+.+||+.++
T Consensus 278 ~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~ 342 (464)
T 3v7d_B 278 GHGNIVVSGSYDN------TLIVWDVAQMKCLYILS----GHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENG 342 (464)
T ss_dssp EETTEEEEEETTS------CEEEEETTTTEEEEEEC----CCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTT
T ss_pred CCCCEEEEEeCCC------eEEEEECCCCcEEEEec----CCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCC
Confidence 3455566666543 58999998766433221 111112233334444466666654 35899999887
Q ss_pred cEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCce
Q 010551 230 EWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEH 309 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (507)
.-...- .........+..++..++.|+.++ .+.++|+.+..-....... .........+.+
T Consensus 343 ~~~~~~-----~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~--------~~~~~~~~~~~~- 403 (464)
T 3v7d_B 343 ELMYTL-----QGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYHHT--------NLSAITTFYVSD- 403 (464)
T ss_dssp EEEEEE-----CCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEECT--------TCCCEEEEEECS-
T ss_pred cEEEEE-----eCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeecCC--------CCccEEEEEeCC-
Confidence 644321 111222234445677777776543 4778898876522211111 111222223333
Q ss_pred EEEEEccCCCCcCceEEEEECCCCC
Q 010551 310 HLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 310 ~l~v~GG~~~~~~~~~~~~~~~~~~ 334 (507)
.+++.|+ + ..+.++|+....
T Consensus 404 ~~l~~~~-d----g~i~iwd~~~g~ 423 (464)
T 3v7d_B 404 NILVSGS-E----NQFNIYNLRSGK 423 (464)
T ss_dssp SEEEEEE-T----TEEEEEETTTCC
T ss_pred CEEEEec-C----CeEEEEECCCCc
Confidence 3555565 2 468888887654
No 76
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.70 E-value=0.37 Score=49.63 Aligned_cols=128 Identities=13% Similarity=0.103 Sum_probs=73.3
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEc-cCCc--eeeeccccccCCCccccCCCcCCCCC---ccceeEEEECCEEE
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDL-RSLA--WSNLRLETELDADKTEDSGLLEVLPP---MSDHCMVKWGTKLL 104 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~-~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~---r~~~~~~~~~~~ly 104 (507)
.+.++.++.||+.... ...++.||. .+++ |+.-...... ..+.. ....+.+..++.||
T Consensus 56 ~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~ 119 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDAS-----------TKAVMCCDVVDRGLAYGAGQIV 119 (571)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGG-----------GGGGCTTCSCCCCCEEETTEEE
T ss_pred cccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCcc-----------ccccccccccccccEEECCEEE
Confidence 4456679999998752 246999999 7764 8764322100 00000 11224556788888
Q ss_pred EEeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCC-CcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc--
Q 010551 105 ILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVT-RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT-- 179 (507)
Q Consensus 105 v~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~-- 179 (507)
+... ...++.+|..|++ |+.-.. ..+.. ....+.++.++.+|+-.+... ......++.||+.+++
T Consensus 120 v~~~-------dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 120 KKQA-------NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAKDTVLMGCSGAE-LGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EECT-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEEECBCGG-GTCCCEEEEEETTTCCEE
T ss_pred EEeC-------CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEECCEEEEEecCCc-cCCCCEEEEEECCCCcEE
Confidence 8743 2359999999885 875431 11111 112233456888776443211 1123569999998775
Q ss_pred EEEec
Q 010551 180 WDAVE 184 (507)
Q Consensus 180 W~~~~ 184 (507)
|+.-.
T Consensus 190 W~~~~ 194 (571)
T 2ad6_A 190 WRAFA 194 (571)
T ss_dssp EEEES
T ss_pred EEEcc
Confidence 87553
No 77
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.68 E-value=0.38 Score=44.14 Aligned_cols=256 Identities=8% Similarity=-0.042 Sum_probs=127.5
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.++.||+. ..+...+... .....+++++- ++.||+.... ...++.||+. +.........
T Consensus 37 ~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~---------- 96 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLPN---------- 96 (299)
T ss_dssp EEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSS----------
T ss_pred cEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCCC----------
Confidence 46778888 7777665311 11223334332 5678877532 2358889886 4554433210
Q ss_pred CCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCC
Q 010551 83 GLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGE 160 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~ 160 (507)
....-++++.. ++.||+.... ...+++||+ ++......... ....-..++.- ++.+|+....
T Consensus 97 ------~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 97 ------PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp ------TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEEEEETT
T ss_pred ------cCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeCC
Confidence 01122333333 5678876532 235899998 77766554211 11111222222 4577775421
Q ss_pred CCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCC
Q 010551 161 DRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 240 (507)
Q Consensus 161 ~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 240 (507)
.+.+++||+ +++......... ...-.+++...++.+|+.... .+.+++||+ ++.+.......
T Consensus 161 ------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~-- 222 (299)
T 2z2n_A 161 ------NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKIPT-- 222 (299)
T ss_dssp ------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSS--
T ss_pred ------CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEECCC--
Confidence 346999999 777766532111 111223344345557775432 246899999 77766532111
Q ss_pred CCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCC
Q 010551 241 VTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 241 p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
+ ....++++.. ++++|+.... .+.+++||+ +.....+.. +.. ...-.+.+. .+..|++...
T Consensus 223 ~-~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~-~~~-----~~~~~~i~~--~~g~l~v~~~--- 284 (299)
T 2z2n_A 223 P-NARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEYPI-QIK-----SAEPHGICF--DGETIWFAME--- 284 (299)
T ss_dssp T-TCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEEEC-SSS-----SCCEEEEEE--CSSCEEEEET---
T ss_pred C-CCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEEeC-CCC-----CCccceEEe--cCCCEEEEec---
Confidence 1 1112233333 4577776421 235889998 445444421 111 011222223 3345666432
Q ss_pred CcCceEEEEECCCC
Q 010551 320 KYNNEVFVMRLKPR 333 (507)
Q Consensus 320 ~~~~~~~~~~~~~~ 333 (507)
.+.+.+|++...
T Consensus 285 --~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 --CDKIGKLTLIKD 296 (299)
T ss_dssp --TTEEEEEEEC--
T ss_pred --CCcEEEEEcCcc
Confidence 256788887544
No 78
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.66 E-value=0.43 Score=50.20 Aligned_cols=132 Identities=16% Similarity=0.109 Sum_probs=74.2
Q ss_pred cceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEe
Q 010551 30 KHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 107 (507)
Q Consensus 30 ~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~G 107 (507)
..+-++.++.||+... ...++.+|..+++ |+.-...... .. ..........+.++.++.||+..
T Consensus 59 ~~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~v~v~~ 124 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKV-----KA---RTSCCDAVNRGVALWGDKVYVGT 124 (668)
T ss_dssp CCCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGG-----GG---GGCTTCSCCCCCEEEBTEEEEEC
T ss_pred ccCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCcc-----cc---ccccccCCccceEEECCEEEEEc
Confidence 3445667999999864 3469999998875 8764322110 00 00000011233456788888764
Q ss_pred ccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc--EEEe
Q 010551 108 GHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAV 183 (507)
Q Consensus 108 G~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~~~ 183 (507)
. ...++.+|..|++ |+..... .........+.++.++.+|+-.+ +........++.||+.+++ |+.-
T Consensus 125 ~-------dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~-~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 125 L-------DGRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNG-GAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCB-CTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred C-------CCEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEECCEEEEeCC-CCCcCCCCEEEEEECCCCcEEEEec
Confidence 2 2359999999886 8765311 11111222234556788776332 2111234579999998875 8765
Q ss_pred c
Q 010551 184 E 184 (507)
Q Consensus 184 ~ 184 (507)
.
T Consensus 196 ~ 196 (668)
T 1kv9_A 196 T 196 (668)
T ss_dssp S
T ss_pred c
Confidence 4
No 79
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.65 E-value=0.18 Score=47.89 Aligned_cols=148 Identities=11% Similarity=0.035 Sum_probs=73.1
Q ss_pred ceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEee
Q 010551 54 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVME 133 (507)
Q Consensus 54 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 133 (507)
.++.+|..++.+..+...... ......+..-+++||+.+.... ...+++||+.++.++.+.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~---------------~~p~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~ 79 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT---------------QNPTYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLN 79 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC---------------SCCCCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeecc---------------CCcceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEee
Confidence 367778888888765433211 1111122222667777654211 346999999888877665
Q ss_pred cCCCCCCCCcCcEEEE-ECC-EEEEEcCCCCCCCccCcEEEEECC-CCcEEEec---cCCCCCCCCC----CceEEEEcC
Q 010551 134 TSGKVPVTRGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVE---VTQTPPAPRY----DHSAALHAN 203 (507)
Q Consensus 134 ~~g~~p~~r~~~~~~~-~~~-~iy~~GG~~~~~~~~n~~~~~d~~-t~~W~~~~---~~~~~p~~r~----~~~~~~~~~ 203 (507)
.. ......-..++. -++ .||+.+.. .+.+.+||+. +.....+. ..+..|.+|. .+.++...+
T Consensus 80 ~~--~~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd 151 (347)
T 3hfq_A 80 TV--VAPGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD 151 (347)
T ss_dssp EE--EEESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT
T ss_pred ee--ecCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC
Confidence 31 001111112222 234 56665432 2357888874 33333332 2222222221 223344445
Q ss_pred CEEEEEcCCCCCCCCCcEEEEECC-CCcEEe
Q 010551 204 RYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQ 233 (507)
Q Consensus 204 ~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~ 233 (507)
+.+|+.+..+ +.+++|++. ++....
T Consensus 152 g~l~v~~~~~-----~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 152 NRLAVIDLGS-----DKVYVYNVSDAGQLSE 177 (347)
T ss_dssp SCEEEEETTT-----TEEEEEEECTTSCEEE
T ss_pred CcEEEEeCCC-----CEEEEEEECCCCcEEE
Confidence 5576654322 468899987 555554
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.55 E-value=0.34 Score=45.37 Aligned_cols=236 Identities=9% Similarity=-0.004 Sum_probs=116.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+|+.++. .+.+.+||+.++........+ ....+++.. ++.+|+.+..
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~s~dg~~l~~~~~~----- 60 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLG------------------YDFVDTAITSDCSNVVVTSDF----- 60 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECC------------------CCEEEEEECSSSCEEEEEEST-----
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEcc------------------CCcceEEEcCCCCEEEEEeCC-----
Confidence 4677877652 357999999998875544322 111122221 3457776652
Q ss_pred CcceEEEEECCCCcE-EEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 115 DSMIVRFIDLETNLC-GVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
...+++||+.++.. ......+..| .++++.. +..+| .+..+. ....+.+||+.+++.......+.
T Consensus 61 -~~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~--- 128 (331)
T 3u4y_A 61 -CQTLVQIETQLEPPKVVAIQEGQSS----MADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFISTIPIPY--- 128 (331)
T ss_dssp -TCEEEEEECSSSSCEEEEEEECSSC----CCCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEEEECCT---
T ss_pred -CCeEEEEECCCCceeEEecccCCCC----ccceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEEEECCC---
Confidence 23699999999875 3322222211 1212222 33566 332221 12379999999887655433222
Q ss_pred CCCCceEEEEcCC-EEEEEcCCCCCCCCCc-EEEEECCCCc-EEecccCCCCCCCCCccEEEEE-CC-eEEEEeccCCCC
Q 010551 192 PRYDHSAALHANR-YLIVFGGCSHSIFFND-LHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI-DE-NWYIVGGGDNNN 266 (507)
Q Consensus 192 ~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~-i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~ 266 (507)
..+.++...++ ++|+.+..+ +. +++|++.... ...... ...+.......++.. ++ .+|+.+..
T Consensus 129 --~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~---- 196 (331)
T 3u4y_A 129 --DAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQ-EFISGGTRPFNITFTPDGNFAFVANLI---- 196 (331)
T ss_dssp --TEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEE-EEECSSSSEEEEEECTTSSEEEEEETT----
T ss_pred --CccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCC-ccccCCCCccceEECCCCCEEEEEeCC----
Confidence 12444444443 577665432 35 7777765432 111100 001111112233332 33 46666532
Q ss_pred CcceEEEEECCCCcE-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCCC
Q 010551 267 GCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 267 ~~~~~~~~d~~~~~W-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w 335 (507)
.+.+.+||+.+... ..+..++.. .........+++.+||+.... .+.++++|+.....
T Consensus 197 -~~~v~v~d~~~~~~~~~~~~~~~~------~~~~~~~~spdg~~l~v~~~~----~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 197 -GNSIGILETQNPENITLLNAVGTN------NLPGTIVVSRDGSTVYVLTES----TVDVFNFNQLSGTL 255 (331)
T ss_dssp -TTEEEEEECSSTTSCEEEEEEECS------SCCCCEEECTTSSEEEEECSS----EEEEEEEETTTTEE
T ss_pred -CCeEEEEECCCCcccceeeeccCC------CCCceEEECCCCCEEEEEEcC----CCEEEEEECCCCce
Confidence 23688999987764 112122111 111223344445567765431 34588888876543
No 81
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.51 E-value=0.24 Score=50.95 Aligned_cols=274 Identities=15% Similarity=0.067 Sum_probs=138.7
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEcc--CCceeeeccccccCCCc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLR--SLAWSNLRLETELDADK 78 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~--~~~W~~~~~~~~~~~~~ 78 (507)
..++++|+.+.+-...-..| ...|.+++. +..+|+.+. .+.+.+||+. +.+ .+.....
T Consensus 177 ~~V~viD~~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~--~v~~i~~----- 238 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTG-----YAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPT--TVAEIKI----- 238 (567)
T ss_dssp TEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCC--EEEEEEC-----
T ss_pred CeEEEEECCCCeEEEEEeCC-----CCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCc--EeEEEec-----
Confidence 45778888887655322122 233444443 557787642 2469999995 442 2221110
Q ss_pred cccCCCcCCCCCccceeEEE-----ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCC--------CCCCcCc
Q 010551 79 TEDSGLLEVLPPMSDHCMVK-----WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV--------PVTRGGH 145 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~-----~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~--------p~~r~~~ 145 (507)
...|| +.++. -+..+|+..-. .+.+.++|..|.+=....+++.+ |.+|...
T Consensus 239 --------G~~P~--~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~ 302 (567)
T 1qks_A 239 --------GSEAR--SIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 302 (567)
T ss_dssp --------CSEEE--EEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred --------CCCCc--eeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEE
Confidence 01122 22222 23456665432 34588899888765443322222 1223222
Q ss_pred EEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEE
Q 010551 146 SVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVL 224 (507)
Q Consensus 146 ~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~ 224 (507)
..+..++..+++-=. ..+.++..|..+.+...+.. .+..+.-|.+..-. ++++|+... ..|.+.++
T Consensus 303 i~~s~~~~~~vv~~~-----~~g~v~~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~Vi 369 (567)
T 1qks_A 303 ILASHYRPEFIVNVK-----ETGKILLVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVI 369 (567)
T ss_dssp EEECSSSSEEEEEET-----TTTEEEEEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEE
T ss_pred EEEcCCCCEEEEEec-----CCCeEEEEecCCCccceeee---eeccccccCceECCCCCEEEEEeC-----CCCeEEEE
Confidence 222222222332211 24578888887766544432 23344445544433 345555332 24679999
Q ss_pred ECCCCcEEecccC-CCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCC-----cEEEeccCCCCCCCCCC
Q 010551 225 DLQTNEWSQPEIK-GDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKL-----AWSILTSVKGRNPLASE 296 (507)
Q Consensus 225 d~~~~~W~~~~~~-~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~-----~W~~v~~~~~~~~~~~~ 296 (507)
|+.+++-...-.. +..|.|..+... .. ++.+|+.+-.. ...+.++|..+. .|+.+..++...
T Consensus 370 D~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g----- 439 (567)
T 1qks_A 370 DTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG----- 439 (567)
T ss_dssp ETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC-----
T ss_pred ECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC-----
Confidence 9999875543334 556665433332 23 24666654211 135778887763 377765554321
Q ss_pred CCceEEEEEcCceEEEEEccCCCC--cCceEEEEECCCC
Q 010551 297 GLSVCSAIIEGEHHLVAFGGYNGK--YNNEVFVMRLKPR 333 (507)
Q Consensus 297 ~~~~~~~~~~~~~~l~v~GG~~~~--~~~~~~~~~~~~~ 333 (507)
..+......++..++||---.+.. ..+.+.+||+.+.
T Consensus 440 ~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 440 GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 122223344556688884322211 3568899998655
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.38 Score=46.54 Aligned_cols=145 Identities=12% Similarity=0.044 Sum_probs=72.3
Q ss_pred CEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
+..++.|+.+ ..+.+||+.++.-.... .... ..-.+++.. ++.+++.|+.+ ..+.+||+.+..
T Consensus 217 ~~~~~~~~~~------g~i~~~d~~~~~~~~~~---~~~~-~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~ 280 (425)
T 1r5m_A 217 DDKFVIPGPK------GAIFVYQITEKTPTGKL---IGHH-GPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGN 280 (425)
T ss_dssp TTEEEEECGG------GCEEEEETTCSSCSEEE---CCCS-SCEEEEEEETTTTEEEEEETT------SCEEEECSSSBS
T ss_pred CCEEEEEcCC------CeEEEEEcCCCceeeee---ccCC-CceEEEEECCCCCEEEEEcCC------CEEEEEECCCCc
Confidence 3445666543 34899999886432221 1111 111122222 45566666654 358889887654
Q ss_pred EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEE
Q 010551 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYI 258 (507)
Q Consensus 180 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v 258 (507)
....-. .......+++...++ +++.|+.+ ..+.+||+.+..-..... . ......+++.. ++.+++
T Consensus 281 ~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~-~---~~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 281 SQNCFY----GHSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSI-V---DGVPIFAGRISQDGQKYA 346 (425)
T ss_dssp CSEEEC----CCSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEE-C---TTCCEEEEEECTTSSEEE
T ss_pred cceEec----CCCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecc-c---CCccEEEEEEcCCCCEEE
Confidence 322211 111222334444566 66666644 368999998776443211 1 01111122222 456777
Q ss_pred EeccCCCCCcceEEEEECCCCc
Q 010551 259 VGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
+|+.++ .+.+||+.+..
T Consensus 347 ~~~~dg-----~i~i~~~~~~~ 363 (425)
T 1r5m_A 347 VAFMDG-----QVNVYDLKKLN 363 (425)
T ss_dssp EEETTS-----CEEEEECHHHH
T ss_pred EEECCC-----eEEEEECCCCc
Confidence 766433 47788876554
No 83
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.43 E-value=0.65 Score=43.93 Aligned_cols=135 Identities=15% Similarity=0.118 Sum_probs=70.1
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCC
Q 010551 118 IVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 118 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~ 195 (507)
.+.+||+.++.-...-. + . .....++.+ ++.+++.|+.++ .+.++|+.+..-...-. + ....-
T Consensus 165 ~i~~wd~~~~~~~~~~~-~--h--~~~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~~~-~---h~~~v 229 (340)
T 1got_B 165 TCALWDIETGQQTTTFT-G--H--TGDVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQTFT-G---HESDI 229 (340)
T ss_dssp CEEEEETTTTEEEEEEC-C--C--SSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEEEC-C---CSSCE
T ss_pred cEEEEECCCCcEEEEEc-C--C--CCceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEEEc-C---CcCCE
Confidence 48899998886443221 1 1 111222333 456777777653 58889988765432211 0 01111
Q ss_pred ceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEE
Q 010551 196 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIV 273 (507)
Q Consensus 196 ~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~ 273 (507)
.+++...++.+++.|+.+ ..+.+||+.+..-.... . .+........+.+ ++.+++.|+.++ .+.+
T Consensus 230 ~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~--~-~~~~~~~v~~~~~s~~g~~l~~g~~d~-----~i~v 296 (340)
T 1got_B 230 NAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTY--S-HDNIICGITSVSFSKSGRLLLAGYDDF-----NCNV 296 (340)
T ss_dssp EEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE--C-CTTCCSCEEEEEECTTSSEEEEEETTS-----EEEE
T ss_pred EEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEE--c-cCCcccceEEEEECCCCCEEEEECCCC-----eEEE
Confidence 223333455577777754 35888998876533211 1 1111112222333 456777776443 4788
Q ss_pred EECCCCc
Q 010551 274 LNMTKLA 280 (507)
Q Consensus 274 ~d~~~~~ 280 (507)
||+.+..
T Consensus 297 wd~~~~~ 303 (340)
T 1got_B 297 WDALKAD 303 (340)
T ss_dssp EETTTCC
T ss_pred EEcccCc
Confidence 8876654
No 84
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.41 E-value=1 Score=46.45 Aligned_cols=123 Identities=16% Similarity=0.146 Sum_probs=70.4
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCCccccCCCcCCCCCcc---ceeEEEECCEEEE
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMS---DHCMVKWGTKLLI 105 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~---~~~~~~~~~~lyv 105 (507)
.+.++.++.||+.... +.++.+|..+++ |+.-...... ..+.+ ..+.+..++.||+
T Consensus 62 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~-------------~~~~~~~~~~g~a~~~~~v~~ 122 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDD-------------IRPCCDVVNRGAAIYGDKVFF 122 (582)
T ss_dssp CCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTT-------------CCCSSCSCCCCCEEETTEEEE
T ss_pred eccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcc-------------cccccccCCCccEEECCEEEE
Confidence 3456679999998753 249999998875 8764432110 00111 2344567888888
Q ss_pred EeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCC--cCcEEEEECC------EEEEEcCCCCCCCccCcEEEEEC
Q 010551 106 LGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTR--GGHSVTLVGS------RLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 106 ~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r--~~~~~~~~~~------~iy~~GG~~~~~~~~n~~~~~d~ 175 (507)
... ...++.+|..|++ |+.-.. .+... ...+-++.++ .+| +|...........++.||+
T Consensus 123 ~t~-------dg~l~AlD~~TG~~~W~~~~~---~~~~~~~~~~sP~v~~~~~~G~~~v~-vg~~~~e~~~~g~v~alD~ 191 (582)
T 1flg_A 123 GTL-------DASVVALNKNTGKVVWKKKFA---DHGAGYTMTGAPTIVKDGKTGKVLLI-HGSSGDEFGVVGRLFARDP 191 (582)
T ss_dssp EET-------TTEEEEEESSSCCEEEEEECS---CGGGTCBCCSCCEEEECTTTCCEEEE-ECCBCGGGCCBCEEEEECT
T ss_pred EeC-------CCEEEEEECCCCCEEeeecCC---CCCcCcccccCCEEeCCCcCCcEEEE-EeccccccCCCCEEEEEEC
Confidence 532 2359999999986 876431 11111 1112234455 444 4443211112457999999
Q ss_pred CCCc--EEEe
Q 010551 176 ETMT--WDAV 183 (507)
Q Consensus 176 ~t~~--W~~~ 183 (507)
.+++ |+..
T Consensus 192 ~tG~~~W~~~ 201 (582)
T 1flg_A 192 DTGEEIWMRP 201 (582)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEeecC
Confidence 8875 9754
No 85
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=96.41 E-value=0.1 Score=40.02 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=55.4
Q ss_pred hccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 010551 423 NSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERATSVQT 493 (507)
Q Consensus 423 ~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~~~~~~~~~~ 493 (507)
......+++++...+...+.++.++.+||+..-.++++.+... +++.+..+.-.+..-++.|+++...++.
T Consensus 34 ~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~EKe~L~~ 108 (111)
T 2v66_B 34 YKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLV 108 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566777888888888888999999999988888877665 7778888888888888999887655543
No 86
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.36 E-value=0.11 Score=48.40 Aligned_cols=231 Identities=7% Similarity=0.011 Sum_probs=109.5
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE-C-CEEEEEcCCCCCccCCceEEEEccCCceeee-ccccccCCCcc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-D-QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNL-RLETELDADKT 79 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~~~~~~~~~ 79 (507)
.++++||+.+.++..+............++++.. + +.||+.... +.+++||+. ++...+ .....
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~------ 112 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSE------ 112 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTT------
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCC------
Confidence 3578889888888876530000011122333333 4 688887641 369999998 776554 32110
Q ss_pred ccCCCcCCCCCccceeEEE-ECCEEEEEeccC---------CCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE
Q 010551 80 EDSGLLEVLPPMSDHCMVK-WGTKLLILGGHY---------KKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL 149 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~---------~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~ 149 (507)
..+..+. +.++. -++++|+..... ........+++||+. ++...+......| ..++.
T Consensus 113 ------~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~-----~~i~~ 179 (314)
T 1pjx_A 113 ------GRRMQGC-NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP-----NGIAV 179 (314)
T ss_dssp ------SCBCBCC-CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE-----EEEEE
T ss_pred ------CccccCC-cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc-----ceEEE
Confidence 0111111 22222 256788765432 111123579999987 6665543211111 22233
Q ss_pred E-----CC-EEEEEcCCCCCCCccCcEEEEECC-CCcEEEeccCCCCCCC--CCCceEEEEcCCEEEEEcCCCCCCCCCc
Q 010551 150 V-----GS-RLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAP--RYDHSAALHANRYLIVFGGCSHSIFFND 220 (507)
Q Consensus 150 ~-----~~-~iy~~GG~~~~~~~~n~~~~~d~~-t~~W~~~~~~~~~p~~--r~~~~~~~~~~~~l~v~GG~~~~~~~~~ 220 (507)
. ++ .+|+.... .+.+++||+. +++..........+.. ..-..++.-.++.+|+.... .+.
T Consensus 180 ~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~ 248 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSH 248 (314)
T ss_dssp EECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTE
T ss_pred ecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCE
Confidence 3 23 46665432 2468899876 4443322111011111 11123333345667775322 136
Q ss_pred EEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCe-EEEEeccCCCCCcceEEEEECCCC
Q 010551 221 LHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 221 i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
+.+||+.++...... ..+. ....+++.. +++ ||+..... ..++.|++...
T Consensus 249 i~~~d~~~g~~~~~~---~~~~-~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRI---RCPF-EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp EEEECTTCBSCSEEE---ECSS-SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred EEEEcCCCCcEeEEE---eCCC-CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 899998755432110 1111 122233322 334 66664322 36888887653
No 87
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.23 E-value=0.022 Score=59.37 Aligned_cols=9 Identities=33% Similarity=0.475 Sum_probs=3.5
Q ss_pred EEEEECCCC
Q 010551 119 VRFIDLETN 127 (507)
Q Consensus 119 ~~~yd~~t~ 127 (507)
+..+++..+
T Consensus 125 L~~L~L~~n 133 (597)
T 3oja_B 125 LTVLVLERN 133 (597)
T ss_dssp CCEEECCSS
T ss_pred CCEEEeeCC
Confidence 333444333
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.22 E-value=1.1 Score=44.29 Aligned_cols=183 Identities=11% Similarity=0.067 Sum_probs=93.0
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++.+++.|+.+. .+.+||+.++.-.... ... .....++.+ ++..++.|+.++ .+.+||+.+
T Consensus 279 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~---~~~--~~~v~~~~~~~~~~~l~sg~~dg------~i~vwd~~~ 341 (464)
T 3v7d_B 279 HGNIVVSGSYDN------TLIVWDVAQMKCLYIL---SGH--TDRIYSTIYDHERKRCISASMDT------TIRIWDLEN 341 (464)
T ss_dssp ETTEEEEEETTS------CEEEEETTTTEEEEEE---CCC--SSCEEEEEEETTTTEEEEEETTS------CEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEe---cCC--CCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCC
Confidence 455566665432 3899999887644322 111 111222222 445666676543 599999987
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEE
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWY 257 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~ 257 (507)
.+-...-. ........+...++ .++.|+.+ ..+.+||+.+..-..... ........+...++.++
T Consensus 342 ~~~~~~~~-----~h~~~v~~~~~~~~-~l~s~s~d-----g~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l 406 (464)
T 3v7d_B 342 GELMYTLQ-----GHTALVGLLRLSDK-FLVSAAAD-----GSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNIL 406 (464)
T ss_dssp TEEEEEEC-----CCSSCEEEEEECSS-EEEEEETT-----SEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEE
T ss_pred CcEEEEEe-----CCCCcEEEEEEcCC-EEEEEeCC-----CcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEE
Confidence 75332211 11222234445555 56666654 358899988765332210 11112223344466777
Q ss_pred EEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEEC
Q 010551 258 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 258 v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 330 (507)
+.|+ + ..+.+||+.+..-......+. ......+..+ +..+++.|+.++ ..-++.+|.
T Consensus 407 ~~~~-d-----g~i~iwd~~~g~~~~~~~~~~-------~~~v~~v~~~-~~~l~~~~~~~g--~~~i~~ldf 463 (464)
T 3v7d_B 407 VSGS-E-----NQFNIYNLRSGKLVHANILKD-------ADQIWSVNFK-GKTLVAAVEKDG--QSFLEILDF 463 (464)
T ss_dssp EEEE-T-----TEEEEEETTTCCEEESCTTTT-------CSEEEEEEEE-TTEEEEEEEETT--EEEEEEEEC
T ss_pred EEec-C-----CeEEEEECCCCcEEehhhccC-------CCcEEEEEec-CCEEEEEEEeCC--eEEEEEeec
Confidence 7765 2 258899998876543211111 1112222333 346666665443 344566664
No 89
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.16 E-value=0.87 Score=47.94 Aligned_cols=203 Identities=15% Similarity=0.124 Sum_probs=104.8
Q ss_pred CCCeEeeCCCC--ceEEeecCCCCCCc-----cccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccc
Q 010551 3 SGSWHLELPYD--LWVTLPVSGARPSP-----RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETE 73 (507)
Q Consensus 3 ~~~~~~d~~~~--~W~~~~~~~~~p~~-----r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~ 73 (507)
..++++|..+. .|+.-........+ ....+.++.++.||+... ...++.+|..+++ |+.-.....
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~~ 160 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRLIALDAATGKEVWHQNTFEGQ 160 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEETTTTC
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEEEEEECCCCCEEeeecCCcCc
Confidence 34688888765 68765521110000 122345557888888653 2469999998875 765432000
Q ss_pred cCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEeecCCCC--CC---------
Q 010551 74 LDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKV--PV--------- 140 (507)
Q Consensus 74 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~--p~--------- 140 (507)
........+.++.++.||+..+... ......++.||..|++ |+.-...... |.
T Consensus 161 -------------~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~ 226 (677)
T 1kb0_A 161 -------------KGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAA 226 (677)
T ss_dssp -------------CSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHH
T ss_pred -------------CcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccc
Confidence 0001122234456888877544222 1124569999999886 8765421111 00
Q ss_pred ------CC-----c---CcEEEEE---CCEEEEEcCCC------------CCCCccCcEEEEECCCCc--EEEeccCCCC
Q 010551 141 ------TR-----G---GHSVTLV---GSRLIIFGGED------------RSRKLLNDVHFLDLETMT--WDAVEVTQTP 189 (507)
Q Consensus 141 ------~r-----~---~~~~~~~---~~~iy~~GG~~------------~~~~~~n~~~~~d~~t~~--W~~~~~~~~~ 189 (507)
.. . ......+ ++.+|+-.|.. ++..+.+.++.+|+.|++ |..-....+.
T Consensus 227 ~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~ 306 (677)
T 1kb0_A 227 RTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN 306 (677)
T ss_dssp TTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred ccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc
Confidence 00 0 0012222 45666654432 334456789999999875 8755432211
Q ss_pred CCCCCCceEEEEc---CC---EEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 190 PAPRYDHSAALHA---NR---YLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 190 p~~r~~~~~~~~~---~~---~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
.........++.+ ++ .+++++..+ ..++.+|..+++
T Consensus 307 wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~-----G~l~~lD~~tG~ 348 (677)
T 1kb0_A 307 WDYTSTQPMILADIKIAGKPRKVILHAPKN-----GFFFVLDRTNGK 348 (677)
T ss_dssp SCCCCCSCCEEEEEEETTEEEEEEEECCTT-----SEEEEEETTTCC
T ss_pred cccccCCCcEEEecccCCcEeeEEEEECCC-----CEEEEEECCCCC
Confidence 1111112222222 22 456665543 368888888775
No 90
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.13 E-value=0.85 Score=43.09 Aligned_cols=229 Identities=15% Similarity=0.101 Sum_probs=108.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..++.-...-... ......+.+ ++.+++.||.+
T Consensus 66 d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~s~~~d---- 118 (340)
T 1got_B 66 DSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLR------------------SSWVMTCAYAPSGNYVACGGLD---- 118 (340)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECS------------------SSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCcceEeecC------------------CccEEEEEECCCCCEEEEEeCC----
Confidence 45566666644 35888898776532221111 111122222 45566667653
Q ss_pred CcceEEEEECCCCc--EEEeecCCCCCCCCcCcE-EEE-ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCC
Q 010551 115 DSMIVRFIDLETNL--CGVMETSGKVPVTRGGHS-VTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP 190 (507)
Q Consensus 115 ~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~-~~~-~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p 190 (507)
..+.+||+.+.. ...... +........ +.. -++. ++.|+.+ ..+.++|+.+..-...-. +
T Consensus 119 --~~v~iw~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~-l~s~s~d------~~i~~wd~~~~~~~~~~~-~--- 182 (340)
T 1got_B 119 --NICSIYNLKTREGNVRVSRE---LAGHTGYLSCCRFLDDNQ-IVTSSGD------TTCALWDIETGQQTTTFT-G--- 182 (340)
T ss_dssp --CEEEEEETTTCSBSCEEEEE---EECCSSCEEEEEEEETTE-EEEEETT------SCEEEEETTTTEEEEEEC-C---
T ss_pred --CeEEEEECccCCCcceeEEE---ecCCCccEEEEEECCCCc-EEEEECC------CcEEEEECCCCcEEEEEc-C---
Confidence 347888887653 111110 000011112 222 2455 4455543 358899998876443211 1
Q ss_pred CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcc
Q 010551 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~ 269 (507)
....-.+++...++.+++.|+.++ .+.+||+.++.-...-. + ....-.+++.. ++.+++.|+.++
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~~~~~-~---h~~~v~~v~~~p~~~~l~s~s~d~----- 248 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQTFT-G---HESDINAICFFPNGNAFATGSDDA----- 248 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEEEEEC-C---CSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeEEEEc-C---CcCCEEEEEEcCCCCEEEEEcCCC-----
Confidence 111122333334555777777543 58889988765433210 1 01111122222 456777776543
Q ss_pred eEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 270 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 270 ~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
.+.+||+.+..-......+.. ......+....+..+++.|+.+ ..+.++|...
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~------~~~v~~~~~s~~g~~l~~g~~d----~~i~vwd~~~ 301 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNI------ICGITSVSFSKSGRLLLAGYDD----FNCNVWDALK 301 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTC------CSCEEEEEECTTSSEEEEEETT----SEEEEEETTT
T ss_pred cEEEEECCCCcEEEEEccCCc------ccceEEEEECCCCCEEEEECCC----CeEEEEEccc
Confidence 377888877643221111110 1122333444444556667654 4577777644
No 91
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.10 E-value=0.42 Score=50.51 Aligned_cols=245 Identities=10% Similarity=-0.032 Sum_probs=118.1
Q ss_pred CeEeeCCCCceEEeecCCCCCCc---cccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 5 SWHLELPYDLWVTLPVSGARPSP---RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~---r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
.|..+.....|..+.....+... ........-+++.+++.-...+.....++++|+.++.........
T Consensus 96 l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--------- 166 (695)
T 2bkl_A 96 LYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--------- 166 (695)
T ss_dssp EEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS---------
T ss_pred EEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC---------
Confidence 47777666677776521111000 111111112555555543222333457999999998764111100
Q ss_pred CCCcCCCCCccceeEEEECCEEEEEeccCCCC-------CCcceEEEEECCCCcEE--EeecCCCCCCCCcCcEEEEE--
Q 010551 82 SGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS-------SDSMIVRFIDLETNLCG--VMETSGKVPVTRGGHSVTLV-- 150 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~~~~yd~~t~~W~--~~~~~g~~p~~r~~~~~~~~-- 150 (507)
.......+..-+++.++++...... .....++++++.++.-. .+. ..+..........+
T Consensus 167 -------~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~Sp 236 (695)
T 2bkl_A 167 -------GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSR 236 (695)
T ss_dssp -------CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECT
T ss_pred -------cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECC
Confidence 0111111222255555555543321 12456999999887632 222 11111112222233
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
+++.++++..+.. ..++++.+|..+..|..+.... ......+..+++ +|+....+ .....|+.+|+.+..
T Consensus 237 DG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~-----~~~~~~~~~~g~-l~~~s~~~--~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 237 DGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGV-----GAKYEVHAWKDR-FYVLTDEG--APRQRVFEVDPAKPA 306 (695)
T ss_dssp TSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECS-----SCCEEEEEETTE-EEEEECTT--CTTCEEEEEBTTBCS
T ss_pred CCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCC-----CceEEEEecCCc-EEEEECCC--CCCCEEEEEeCCCCC
Confidence 3443444433221 2567898988778888886421 111222234455 66654432 223579999987764
Q ss_pred ---EEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEe
Q 010551 231 ---WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 231 ---W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v 284 (507)
|..+.. ..+. .....+...++.+++....+ ....++++++....-..+
T Consensus 307 ~~~~~~l~~--~~~~-~~l~~~~~~~~~lv~~~~~d---g~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 307 RASWKEIVP--EDSS-ASLLSVSIVGGHLSLEYLKD---ATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp GGGCEEEEC--CCSS-CEEEEEEEETTEEEEEEEET---TEEEEEEEETTCCEEEEC
T ss_pred ccCCeEEec--CCCC-CeEEEEEEECCEEEEEEEEC---CEEEEEEEeCCCCeeEEe
Confidence 776532 1111 11122333477777765432 345788898765544444
No 92
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.08 E-value=0.41 Score=50.09 Aligned_cols=150 Identities=13% Similarity=-0.023 Sum_probs=82.6
Q ss_pred cceEEEEECC-CC---cEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCC-
Q 010551 116 SMIVRFIDLE-TN---LCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT- 188 (507)
Q Consensus 116 ~~~~~~yd~~-t~---~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~- 188 (507)
...++++|+. ++ ....+... . ........+ ++++|+.+..++ ...++.+|+.+.++..+.....
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~---~--~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGG---P--EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEE---T--TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSB
T ss_pred CcEEEEEEECCCCcccccEEeCCC---C--CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeeccccccc
Confidence 4679999999 67 44444311 0 111122222 567776665442 3469999998888887754211
Q ss_pred C--CCCCC-CceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEE-EEECCeEEEEeccCC
Q 010551 189 P--PAPRY-DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAG-ITIDENWYIVGGGDN 264 (507)
Q Consensus 189 ~--p~~r~-~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~ 264 (507)
. |.-.. ....+...++.+++.+.. ....+|.+|+.++....+.. +. .....+ ..-++.+++..+..
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~----~~-~~~~~~~s~~~~~~~~~~~~~- 356 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAG----PW-TEWAATLTVSGTRAVGVAASP- 356 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCS----SC-CEEEEEEEEETTEEEEEEEET-
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecC----CC-CeEEEEEecCCCEEEEEEcCC-
Confidence 0 10010 122333445556665543 23578999998888766532 11 111222 33456666554422
Q ss_pred CCCcceEEEEECCCCcEEEec
Q 010551 265 NNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 265 ~~~~~~~~~~d~~~~~W~~v~ 285 (507)
.....+|.+|+.+...+.+.
T Consensus 357 -~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 357 -RTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp -TEEEEEEEEETTTCCEEEEE
T ss_pred -CCCCEEEEEECCCCceEEee
Confidence 23457899999888877764
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.08 E-value=0.78 Score=44.02 Aligned_cols=116 Identities=12% Similarity=0.031 Sum_probs=55.3
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCC-CC-CCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ-TP-PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~-~~-p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
++ +++.|+.+ ..+.+||+.+.+-...-... .. +....-.+++...++.+++.|+.++ ....+.+||+.+
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~ 267 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEF 267 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTT
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCC
Confidence 45 66666654 35899999877543322110 00 0011122233333444666666431 113688999887
Q ss_pred CcEEecccCCCCCC--------CCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 229 NEWSQPEIKGDLVT--------GRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 229 ~~W~~~~~~~~~p~--------~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
..-...-.....+. ....-..+.+ ++.+++.|+.++ .+.+||+.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~ 324 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-----KLRFWDVKTKE 324 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTE
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEcCCCc
Confidence 65333211000000 1111122223 456677766433 57889987764
No 94
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.07 E-value=1 Score=42.82 Aligned_cols=135 Identities=12% Similarity=0.019 Sum_probs=70.2
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE----CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCC
Q 010551 118 IVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 118 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r 193 (507)
.+.+||+.++.-...-. +. . ....++.+ ++.+++.|+.++ .+.++|+.+.+....-. + ...
T Consensus 177 ~v~lwd~~~~~~~~~~~-~h--~--~~v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~-~---h~~ 241 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFH-GH--G--ADVLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAFE-T---HES 241 (354)
T ss_dssp EEEEEETTTCCEEEEEE-CC--S--SCEEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEEC-C---CSS
T ss_pred cEEEEeCCCCeEEEEEc-CC--C--CCeEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEec-C---CCC
Confidence 48889998886543221 11 0 11122222 246777787653 58999998877543321 0 011
Q ss_pred CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceE
Q 010551 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 194 ~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~ 271 (507)
.-.+++...++.+++.|+.++ .+.+||+.+..-..... ..........+.+ ++.+++.|+.++ .+
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~---~~~~~~~~~~~~~s~~g~~l~~g~~d~-----~i 308 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYS---KESIIFGASSVDFSLSGRLLFAGYNDY-----TI 308 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CTTCCSCEEEEEECTTSSEEEEEETTS-----CE
T ss_pred CeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CCCcccceeEEEEeCCCCEEEEEECCC-----cE
Confidence 112223333455777777543 58889988765333211 1111122223333 456777766433 47
Q ss_pred EEEECCCCc
Q 010551 272 IVLNMTKLA 280 (507)
Q Consensus 272 ~~~d~~~~~ 280 (507)
.+||+.+..
T Consensus 309 ~vwd~~~~~ 317 (354)
T 2pbi_B 309 NVWDVLKGS 317 (354)
T ss_dssp EEEETTTCS
T ss_pred EEEECCCCc
Confidence 888886654
No 95
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.04 E-value=0.87 Score=41.59 Aligned_cols=214 Identities=9% Similarity=-0.041 Sum_probs=107.9
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.++.||+. .....+... ......+++++. ++.||+.... ...+++||+ ++.........
T Consensus 79 ~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---------- 138 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---------- 138 (299)
T ss_dssp EEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS----------
T ss_pred eEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC----------
Confidence 36677765 555555421 112223344443 5678886532 246889998 66655433211
Q ss_pred CCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcC
Q 010551 83 GLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGG 159 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG 159 (507)
....-++++.. ++++|+.... ...+++||+ +++...... +..........+ ++.||+...
T Consensus 139 ------~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 139 ------KGSYPSFITLGSDNALWFTENQ------NNAIGRITE-SGDITEFKI----PTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp ------TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEET
T ss_pred ------CCCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEeeC----CCCCCcceeEEECCCCCEEEEcc
Confidence 01112233333 5678875421 345999999 887776532 111122222333 357776543
Q ss_pred CCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCC
Q 010551 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 160 ~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
. .+.+.+||+ ++.......... ...-.+++.-.++.+|+.... .+.+++||+ ++..........
T Consensus 202 ~------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~ 265 (299)
T 2z2n_A 202 I------GNKIGRITT-SGEITEFKIPTP---NARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEYPIQIK 265 (299)
T ss_dssp T------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEEECSSS
T ss_pred C------CceEEEECC-CCcEEEEECCCC---CCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEEeCCCC
Confidence 2 346999999 777766532111 111223333345567775421 246899998 455544321111
Q ss_pred CCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCC
Q 010551 240 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
....++++.-++.+|+... .+.+..|++.+.
T Consensus 266 ---~~~~~~i~~~~g~l~v~~~------~~~l~~~~~~~~ 296 (299)
T 2z2n_A 266 ---SAEPHGICFDGETIWFAME------CDKIGKLTLIKD 296 (299)
T ss_dssp ---SCCEEEEEECSSCEEEEET------TTEEEEEEEC--
T ss_pred ---CCccceEEecCCCEEEEec------CCcEEEEEcCcc
Confidence 1122344444456776642 135778887664
No 96
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.03 E-value=0.91 Score=41.79 Aligned_cols=235 Identities=10% Similarity=-0.106 Sum_probs=117.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 115 (507)
++.||+.+.. ...++.||+.++ ...+.... ..-++++.. +++||+....
T Consensus 39 g~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~~------------------~~~~~l~~~~dg~l~v~~~~------ 88 (296)
T 3e5z_A 39 RSAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHPS------------------HHQNGHCLNKQGHLIACSHG------ 88 (296)
T ss_dssp GTEEEEEEGG-----GTEEEEEETTSC-EEEEESSC------------------SSEEEEEECTTCCEEEEETT------
T ss_pred CCEEEEEeCC-----CCEEEEEECCCC-eEEEECCC------------------CCcceeeECCCCcEEEEecC------
Confidence 3458887753 246999999987 55443211 111233322 5677765421
Q ss_pred cceEEEEECCCCcEEEeecC-CCCCCCCcCcEEEEECCEEEEE----cCCCC-------CCCccCcEEEEECCCCcEEEe
Q 010551 116 SMIVRFIDLETNLCGVMETS-GKVPVTRGGHSVTLVGSRLIIF----GGEDR-------SRKLLNDVHFLDLETMTWDAV 183 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~-g~~p~~r~~~~~~~~~~~iy~~----GG~~~-------~~~~~n~~~~~d~~t~~W~~~ 183 (507)
...+.+||+.+++...+... ...+..+....++.-++.+|+. |..+. .....+.+++||+. ++...+
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 23599999999988766421 0111111112222235678875 43110 01113479999987 555554
Q ss_pred ccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECC-CCcE-EecccCCCCCCCCCccEEEEE-CCeEEEEe
Q 010551 184 EVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEW-SQPEIKGDLVTGRAGHAGITI-DENWYIVG 260 (507)
Q Consensus 184 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W-~~~~~~~~~p~~r~~~~~~~~-~~~l~v~G 260 (507)
.. ... .-.+++...++.+++.+.. .+.+++||+. ++.. ...... ... .....+++.- ++++||..
T Consensus 168 ~~--~~~---~~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 168 IR--DRV---KPNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHF-TVE-PGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EC--CCS---SEEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEE
T ss_pred ec--CCC---CCccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEe-eCC-CCCCCeEEECCCCCEEEEc
Confidence 32 111 1123333334445544332 2479999986 5555 221111 111 1111123333 56788775
Q ss_pred ccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCCCC
Q 010551 261 GGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 261 G~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w 335 (507)
+ ..+.+||+.......+.. +. +...+.+.-++...|++... ..+|.|++.+..-
T Consensus 236 ~-------~~v~~~~~~g~~~~~~~~-~~-------~~~~~~f~~~d~~~L~v~t~------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 236 G-------DGVHVLTPDGDELGRVLT-PQ-------TTSNLCFGGPEGRTLYMTVS------TEFWSIETNVRGL 289 (296)
T ss_dssp T-------TEEEEECTTSCEEEEEEC-SS-------CCCEEEEESTTSCEEEEEET------TEEEEEECSCCBC
T ss_pred C-------CeEEEECCCCCEEEEEEC-CC-------CceeEEEECCCCCEEEEEcC------CeEEEEEcccccc
Confidence 1 358899988655554432 21 11111111233356777442 4689999876643
No 97
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.03 E-value=0.65 Score=43.27 Aligned_cols=114 Identities=19% Similarity=0.129 Sum_probs=58.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCC--CCcCcEEEEE-CC-EEEEEcCC---CCCCC--ccCcE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV--TRGGHSVTLV-GS-RLIIFGGE---DRSRK--LLNDV 170 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~--~r~~~~~~~~-~~-~iy~~GG~---~~~~~--~~n~~ 170 (507)
++.+|+.++. ...+++||+.+++-......+. +. ...-+.++.. ++ .+|+.... ..... ..+.+
T Consensus 45 g~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i 117 (337)
T 1pby_B 45 GRIAYATVNK------SESLVKIDLVTGETLGRIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV 117 (337)
T ss_dssp SSEEEEEETT------TTEEEEEETTTCCEEEEEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred CCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCceE
Confidence 3467776642 2459999999887554322111 00 0011222222 33 66665311 00000 13679
Q ss_pred EEEECCCCcEEEeccCCCCCCCCCCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 171 HFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 171 ~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
++||+.+.+....-..+. ..+.++...+ +++|+.+ +.++++|+.+++-..
T Consensus 118 ~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 118 ALYDAETLSRRKAFEAPR-----QITMLAWARDGSKLYGLG--------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp EEEETTTTEEEEEEECCS-----SCCCEEECTTSSCEEEES--------SSEEEEETTTTEEEE
T ss_pred EEEECCCCcEEEEEeCCC-----CcceeEECCCCCEEEEeC--------CeEEEEECCCCcEee
Confidence 999998877554332221 1233343333 4466652 479999999887553
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.063 Score=57.54 Aligned_cols=231 Identities=12% Similarity=0.100 Sum_probs=111.1
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE--C--CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--D--QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADK 78 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~--~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~ 78 (507)
..+.++|+....+..+.. .......-.++.. + +.+++.|+.+ ..+.++|+.++.|..+......
T Consensus 31 g~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~~~~~~~~~h---- 98 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWSQIAVHAVH---- 98 (753)
T ss_dssp TEEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEEEEEEEECCC----
T ss_pred CcEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcccccccccCC----
Confidence 345566666666665543 1111222222222 2 5677777644 3589999999887766543211
Q ss_pred cccCCCcCCCCCccceeEEEE--C--CEEEEEeccCCCCCCcceEEEEECCCCcEEE-eecCCCCCCCCcCcEEEEE---
Q 010551 79 TEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKKSSDSMIVRFIDLETNLCGV-METSGKVPVTRGGHSVTLV--- 150 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~g~~p~~r~~~~~~~~--- 150 (507)
......+.+ + +.+++.|+.++ .+.+||+.++.-.. .... ..+ ....++.+
T Consensus 99 ------------~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~~~~~~~~~~-~~~---~~v~~l~~~p~ 156 (753)
T 3jro_A 99 ------------SASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIID-AHA---IGVNSASWAPA 156 (753)
T ss_dssp ------------SSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCSSSCCCCEEEE-CCS---SCEEEEEECCC
T ss_pred ------------CCCeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecCCCcceeEee-cCC---CceEEEEecCc
Confidence 112223333 2 56777776432 48888887762111 1100 011 11122222
Q ss_pred ------------CCEEEEEcCCCCCCCccCcEEEEECCCC--cEEEeccCCCCCCCCCCceEEEEcC---CEEEEEcCCC
Q 010551 151 ------------GSRLIIFGGEDRSRKLLNDVHFLDLETM--TWDAVEVTQTPPAPRYDHSAALHAN---RYLIVFGGCS 213 (507)
Q Consensus 151 ------------~~~iy~~GG~~~~~~~~n~~~~~d~~t~--~W~~~~~~~~~p~~r~~~~~~~~~~---~~l~v~GG~~ 213 (507)
++.+++.|+.++ .+.+||+.+. .+..+..... ....-.+++...+ +.+++.||.+
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp C---------CGGGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred ccccccccccCCCCCEEEEEECCC------eEEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCCEEEEEecC
Confidence 245666776543 4788877554 3443322111 1111223333344 5678887765
Q ss_pred CCCCCCcEEEEECCCCc--EEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCC-CcEEEecc
Q 010551 214 HSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTK-LAWSILTS 286 (507)
Q Consensus 214 ~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~-~~W~~v~~ 286 (507)
+ .+.+||+.+.. +.... .........-.+++.. ++..++.||.++ .+.+||+.+ ..|..+..
T Consensus 229 g-----~I~iwd~~~~~~~~~~~~-~~~~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vwd~~~~~~~~~~~~ 294 (753)
T 3jro_A 229 R-----TCIIWTQDNEQGPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGE 294 (753)
T ss_dssp S-----CEEEEEESSSSSCCBCCB-SSSSCCSSCCCCEEECTTTCCEEEECSSS-----CEECCBCCSSSCCBCCCC
T ss_pred C-----EEEEecCCCCCCcceeEE-eccCCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEEecCCCCCcccccc
Confidence 3 57888887653 11110 0010111111122222 456777776543 366777763 45655443
No 99
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.00 E-value=0.2 Score=48.02 Aligned_cols=151 Identities=11% Similarity=0.136 Sum_probs=71.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.|..+...... ......+.+ ++.+++.|+.+.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~s~d~--- 77 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDH----------------DKIVTCVDWAPKSNRIVTCSQDR--- 77 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCC----------------SSCEEEEEECTTTCCEEEEETTS---
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecC----------------CceEEEEEEeCCCCEEEEEeCCC---
Confidence 55666777643 4588999998887766544211 111222333 456666666432
Q ss_pred CcceEEEEECCCCc-EEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCc-EEEeccCCCCC
Q 010551 115 DSMIVRFIDLETNL-CGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPP 190 (507)
Q Consensus 115 ~~~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~-W~~~~~~~~~p 190 (507)
.+.+||+.++. |..... .........++.+ ++.+++.|+.+. .+.+||+.+.+ |..+.... .+
T Consensus 78 ---~v~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~-~~ 144 (377)
T 3dwl_C 78 ---NAYVYEKRPDGTWKQTLV---LLRLNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLK-RP 144 (377)
T ss_dssp ---SEEEC------CCCCEEE---CCCCSSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEEC-SS
T ss_pred ---eEEEEEcCCCCceeeeeE---ecccCCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEee-cc
Confidence 38888888876 544331 1111112223333 456666776543 47888887654 32221110 11
Q ss_pred CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
....-.+++...++.+++.|+.+ ..+.+||+.+.
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~ 178 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCAD-----RKAYVLSAYVR 178 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESS-----SCEEEEEECCS
T ss_pred cCCCeEEEEEcCCCCEEEEEeCC-----CEEEEEEEEec
Confidence 11222233333455577777754 35788887543
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.00 E-value=1.3 Score=43.23 Aligned_cols=225 Identities=12% Similarity=0.108 Sum_probs=107.9
Q ss_pred CceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEE
Q 010551 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 130 (507)
Q Consensus 53 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~ 130 (507)
+.|+++|..++.-..+..... ......++.+ ++.+++.|+.+. .+.+||+.+++-.
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~----------------~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~ 182 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRL 182 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecC----------------CCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEE
Confidence 468999999887655433211 1112233333 456677776543 3889999888643
Q ss_pred EeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEc
Q 010551 131 VMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 210 (507)
... ... .....+...++.+++.|+.+. .+..+|............+. ...........++..++.|
T Consensus 183 ~~~---~~h--~~~v~~~s~~~~~l~sgs~d~------~i~~~d~~~~~~~~~~~~~h---~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 183 RNM---TSH--SARVGSLSWNSYILSSGSRSG------HIHHHDVRVAEHHVATLSGH---SQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp EEE---CCC--SSCEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEE
T ss_pred EEE---eCC--CCceEEEeeCCCEEEEEeCCC------ceeEeeecccceeeEEeccc---ccceeeeeecCCCCeeeee
Confidence 322 111 122334455667777777543 47777776544332221111 1111122222344456666
Q ss_pred CCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE---CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccC
Q 010551 211 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~ 287 (507)
+.+ +.+.+++..++.-..... ...........+... +..+++.||+..+. .+.++|+.+..-......
T Consensus 249 ~~D-----~~v~i~~~~~~~~~~~~~-~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~---~I~iwd~~t~~~~~~~~~ 319 (420)
T 4gga_A 249 GND-----NLVNVWPSAPGEGGWVPL-QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR---HIRIWNVCSGACLSAVDA 319 (420)
T ss_dssp ETT-----SCEEEEESSCCSSCSCCS-EEECCCSSCEEEEEECTTCTTEEEEEECTTTC---EEEEEETTTTEEEEEEEC
T ss_pred ecc-----ccceEEeeccccccceee-eeecccCCceeeeeeCCCcccEEEEEeecCCC---EEEEEeCCccccceeecc
Confidence 544 356777776543111000 000001111111122 34566555433322 477889888764432221
Q ss_pred CCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 288 KGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
. .........+....+++.+|.. .+.+.++|+...
T Consensus 320 ~--------~~v~~~~~~~~~~~lv~~sg~~---d~~I~iwd~~~~ 354 (420)
T 4gga_A 320 H--------SQVCSILWSPHYKELISGHGFA---QNQLVIWKYPTM 354 (420)
T ss_dssp S--------SCEEEEEEETTTTEEEEEECTT---TCCEEEEETTTC
T ss_pred c--------cceeeeeecCCCCeEEEEEecC---CCEEEEEECCCC
Confidence 1 1122233344455666665643 345778887543
No 101
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.98 E-value=0.022 Score=59.36 Aligned_cols=6 Identities=17% Similarity=0.329 Sum_probs=2.3
Q ss_pred EECCCC
Q 010551 328 MRLKPR 333 (507)
Q Consensus 328 ~~~~~~ 333 (507)
+++..+
T Consensus 350 L~l~~N 355 (597)
T 3oja_B 350 LTLSHN 355 (597)
T ss_dssp EECCSS
T ss_pred EEeeCC
Confidence 344333
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.98 E-value=1.1 Score=42.22 Aligned_cols=149 Identities=13% Similarity=0.130 Sum_probs=69.7
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCC-CcEE-EeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLET-MTWD-AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t-~~W~-~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
++..++.|+.+ ..+.+||+.+ ..-. .+.. ....-.+++...++.+++.|+.+ ..+.+||+.+
T Consensus 186 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~ 249 (369)
T 3zwl_B 186 KGKYIIAGHKD------GKISKYDVSNNYEYVDSIDL-----HEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVST 249 (369)
T ss_dssp GGCEEEEEETT------SEEEEEETTTTTEEEEEEEC-----CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeEEEEec-----CCCceeEEEECCCCCEEEEecCC-----ceEEEEECCC
Confidence 34566666654 3589999987 3322 2221 11112233333355466666543 3689999988
Q ss_pred CcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCC---------cceEEEEECCCCcEEEeccCCCCCCCCCCCC
Q 010551 229 NEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNG---------CQETIVLNMTKLAWSILTSVKGRNPLASEGL 298 (507)
Q Consensus 229 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~---------~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~ 298 (507)
........ .......++.. ++..+++|+..+... ...+.+||..+..-... +... ..
T Consensus 250 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~------~~ 316 (369)
T 3zwl_B 250 LQVLKKYE-----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR--VQGH------FG 316 (369)
T ss_dssp CCEEEEEE-----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE--EECC------SS
T ss_pred Cceeeeec-----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh--eecc------cC
Confidence 76554321 11111122222 345666655433211 12477888776642221 1111 11
Q ss_pred ceEEEEEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 299 SVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 299 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
....+....+..+++.||.+ ..+.++++..
T Consensus 317 ~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred cEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 12223333333456667654 3566666643
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.24 Score=52.97 Aligned_cols=106 Identities=12% Similarity=0.103 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--C--CEEEEEeccCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~ 112 (507)
++.+++.||.+ ..+.+||+...++..+...... ......+.+ + +.+++.|+.++
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h----------------~~~V~~l~~s~~~~~~~l~s~s~Dg- 77 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASCSYDG- 77 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECCTTSCSEEEEEETTS-
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCC----------------cCceEEEEecCCCCCCEEEEEeCCC-
Confidence 45566666643 3588999887777766543211 112223333 2 56667776532
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--C--CEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 113 SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
.+.+||+.++.|..+... ........++.+ + +.+++.|+.++ .+.+||+.+.
T Consensus 78 -----~I~vwd~~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~ 133 (753)
T 3jro_A 78 -----KVLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKEN 133 (753)
T ss_dssp -----CEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCSS
T ss_pred -----eEEEEECCCCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecC
Confidence 388899999988766532 222222333333 2 56777777653 5888888765
No 104
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.97 E-value=0.86 Score=42.51 Aligned_cols=164 Identities=7% Similarity=-0.037 Sum_probs=77.2
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCC-CcEEEee--cCCCCCCCCcCcEEEEE--CC-EEEEEcCCCCCCCccCcEEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLET-NLCGVME--TSGKVPVTRGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFL 173 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~--~~g~~p~~r~~~~~~~~--~~-~iy~~GG~~~~~~~~n~~~~~ 173 (507)
++.||+.+.. ...+.+||+.+ ++..... .. ..+... ....+.+ ++ .+|+.+.. .+.+.+|
T Consensus 140 g~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~pdg~~l~~~~~~------~~~i~~~ 205 (343)
T 1ri6_A 140 NRTLWVPALK------QDRICLFTVSDDGHLVAQDPAEV-TTVEGA-GPRHMVFHPNEQYAYCVNEL------NSSVDVW 205 (343)
T ss_dssp SSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEE-ECSTTC-CEEEEEECTTSSEEEEEETT------TTEEEEE
T ss_pred CCEEEEecCC------CCEEEEEEecCCCceeeeccccc-ccCCCC-CcceEEECCCCCEEEEEeCC------CCEEEEE
Confidence 3467766522 23588999887 7665432 11 111111 1112233 33 57766543 2468888
Q ss_pred ECC--CCcEEEeccCCCCCCC---CCCc-eEEEEc-CCEEEEEcCCCCCCCCCcEEEEECC--CCcEEecccCCCCCCCC
Q 010551 174 DLE--TMTWDAVEVTQTPPAP---RYDH-SAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQ--TNEWSQPEIKGDLVTGR 244 (507)
Q Consensus 174 d~~--t~~W~~~~~~~~~p~~---r~~~-~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~--~~~W~~~~~~~~~p~~r 244 (507)
|+. +..+.........+.. .... .++... ++++|+.+..+ +.+.+||+. ++.+..+... +...
T Consensus 206 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~---~~~~ 277 (343)
T 1ri6_A 206 ELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQ---PTET 277 (343)
T ss_dssp ESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEE---ECSS
T ss_pred EecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeee---cCCC
Confidence 884 4555433221112221 1111 233333 34666655322 468888887 5555554221 1111
Q ss_pred CccEEEEE-CCe-EEEEeccCCCCCcceEEEEECCCCcEEEeccCC
Q 010551 245 AGHAGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 245 ~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~ 288 (507)
....++.. +++ +|+.++.+ ..-.+|.+|..+..++.+..++
T Consensus 278 ~~~~~~~s~dg~~l~~~~~~~---~~v~v~~~d~~~g~~~~~~~~~ 320 (343)
T 1ri6_A 278 QPRGFNVDHSGKYLIAAGQKS---HHISVYEIVGEQGLLHEKGRYA 320 (343)
T ss_dssp SCCCEEECTTSSEEEEECTTT---CEEEEEEEETTTTEEEEEEEEE
T ss_pred ccceEEECCCCCEEEEecCCC---CeEEEEEEcCCCceeeEccccc
Confidence 11122322 344 55543222 2233555688888888776543
No 105
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.96 E-value=0.13 Score=39.20 Aligned_cols=87 Identities=14% Similarity=0.145 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH----
Q 010551 389 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS---- 464 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~---- 464 (507)
..+..|+.++.......... +..+...+....+.+.++..++..++.++..+.+.+..+.+...++...
T Consensus 9 kKm~~lk~e~e~a~drae~~-------e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~ 81 (101)
T 3u1c_A 9 KKMQMLKLDKENALDRAEQA-------EADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENA 81 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33555555555544433333 3333333333333333344434444433333333333333333333322
Q ss_pred HHHHHHHHHHHHhHHHHH
Q 010551 465 QTIENEVQILRQQKSAFE 482 (507)
Q Consensus 465 ~~le~e~~~~~~~~~~~~ 482 (507)
.+.+.++.-+.++++.++
T Consensus 82 ~~aE~ev~~L~RriqllE 99 (101)
T 3u1c_A 82 AKAESEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 244445666666555544
No 106
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.96 E-value=1.2 Score=46.08 Aligned_cols=128 Identities=17% Similarity=0.129 Sum_probs=71.6
Q ss_pred ceEEEECCEEEEEcCCCCCccCCceEEEEc-cCCc--eeeeccccccCCCccccCCCcCCCCCc---cceeEEE--ECCE
Q 010551 31 HAAAVFDQKLYIVGGSRNGRFLSDVQVFDL-RSLA--WSNLRLETELDADKTEDSGLLEVLPPM---SDHCMVK--WGTK 102 (507)
Q Consensus 31 ~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~-~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r---~~~~~~~--~~~~ 102 (507)
.+.++.++.||+.+.. .+.++.||. .+++ |+.-...... ..+..+ ...+.++ .++.
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~-----------~~~~~~~~~~~~g~av~p~~g~ 119 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPA-----------ARAVACCDLVNRGLAYWPGDGK 119 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGG-----------GGGGCSSCSCCCCCEEECCCSS
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCcc-----------ccccccccccccceEEEecCCc
Confidence 4556679999998752 246999999 7774 8764432110 000011 1123344 4666
Q ss_pred ----EEEEeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCC-CcCcEEEEECCEEEEEcCCCCCCCccCcEEEEEC
Q 010551 103 ----LLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVT-RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 103 ----lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~ 175 (507)
||+... ...++.+|..|++ |+.-.. ..... ....+-++.++.+|+-.+.. .......++.||.
T Consensus 120 ~~~rV~v~t~-------dg~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~~g~V~vg~~g~-e~g~~g~v~A~D~ 189 (599)
T 1w6s_A 120 TPALILKTQL-------DGNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVVKDKVIIGSSGA-ELGVRGYLTAYDV 189 (599)
T ss_dssp SCCEEEEECT-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEECCBCG-GGTCCCEEEEEET
T ss_pred ceeEEEEEcC-------CCEEEEEECCCCCEEEeecCC--CCCccceeecCCEEECCEEEEEeccc-ccCCCCeEEEEEC
Confidence 777532 2359999999886 876431 11111 11223345688776533211 1112457999999
Q ss_pred CCCc--EEEec
Q 010551 176 ETMT--WDAVE 184 (507)
Q Consensus 176 ~t~~--W~~~~ 184 (507)
.+++ |+.-.
T Consensus 190 ~TG~~~W~~~~ 200 (599)
T 1w6s_A 190 KTGEQVWRAYA 200 (599)
T ss_dssp TTCCEEEEEES
T ss_pred CCCcEEEEEcC
Confidence 8875 87654
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.96 E-value=0.55 Score=50.31 Aligned_cols=188 Identities=14% Similarity=0.059 Sum_probs=92.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++..++.|+.+ ..+.+||..++......... ......+.+ ++..++.|+.+
T Consensus 66 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~d---- 118 (814)
T 3mkq_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEAH------------------PDYIRSIAVHPTKPYVLSGSDD---- 118 (814)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEECC------------------SSCEEEEEECSSSSEEEEEETT----
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEecC------------------CCCEEEEEEeCCCCEEEEEcCC----
Confidence 45556666542 46899999887654332211 111122222 44455555532
Q ss_pred CcceEEEEECCCC-cEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 115 DSMIVRFIDLETN-LCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~yd~~t~-~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
..+.+||..++ ....... + ....-.+++.. ++.+++.|+.++ .+.+||+.+..-...... ..
T Consensus 119 --g~i~vw~~~~~~~~~~~~~-~---~~~~v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~---~~ 183 (814)
T 3mkq_A 119 --LTVKLWNWENNWALEQTFE-G---HEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTT---GQ 183 (814)
T ss_dssp --SEEEEEEGGGTSEEEEEEE-C---CSSCEEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEEC---CC
T ss_pred --CEEEEEECCCCceEEEEEc-C---CCCcEEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEec---CC
Confidence 34888898776 3322221 1 11111222333 346777777653 588999866542222111 11
Q ss_pred CCCCceEEEEc--CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCC
Q 010551 192 PRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNG 267 (507)
Q Consensus 192 ~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~ 267 (507)
......++... ++.+++.|+.+ ..+.+||+.++.-...-. + .......+.+ ++.+++.|+.++
T Consensus 184 ~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~l~~~~~dg--- 250 (814)
T 3mkq_A 184 ERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVATLE-G----HMSNVSFAVFHPTLPIIISGSEDG--- 250 (814)
T ss_dssp TTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEEEE-C----CSSCEEEEEECSSSSEEEEEETTS---
T ss_pred CCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEEEc-C----CCCCEEEEEEcCCCCEEEEEeCCC---
Confidence 12222233332 45467777654 368899988766433210 1 1111122222 345677776443
Q ss_pred cceEEEEECCCCcE
Q 010551 268 CQETIVLNMTKLAW 281 (507)
Q Consensus 268 ~~~~~~~d~~~~~W 281 (507)
.+.+||+.+..-
T Consensus 251 --~v~vwd~~~~~~ 262 (814)
T 3mkq_A 251 --TLKIWNSSTYKV 262 (814)
T ss_dssp --CEEEEETTTCSE
T ss_pred --eEEEEECCCCcE
Confidence 377888876543
No 108
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.92 E-value=0.55 Score=50.18 Aligned_cols=186 Identities=12% Similarity=0.066 Sum_probs=94.8
Q ss_pred CCCeEeeCCCCceEEeecCCCCCC-c-cccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCC------cee---eecc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPS-P-RYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSL------AWS---NLRL 70 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~-~-r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~------~W~---~~~~ 70 (507)
.|+++||+.+++++.......... + ..-++++.- ++.|+|- ... ..+++||+.+. .+. ....
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS-----SCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC-----CceEEEccccccccCCcceeccccccc
Confidence 478899999999987753111111 1 111222222 4677763 211 24889987641 121 0010
Q ss_pred ccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE
Q 010551 71 ETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL 149 (507)
Q Consensus 71 ~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~ 149 (507)
.. + .+...-.+++.- ++.|+++||... -+++||+.+++++.+... ..+. .....+..
T Consensus 466 ~~-------------~-l~~~~i~~i~~d~~g~lWi~~~t~~------Gl~~~d~~~~~~~~~~~~-~~~~-~~~~~~i~ 523 (758)
T 3ott_A 466 HN-------------G-LSGMFINQIIPDNEGNVWVLLYNNK------GIDKINPRTREVTKLFAD-ELTG-EKSPNYLL 523 (758)
T ss_dssp GG-------------T-CSCSCEEEEEECTTSCEEEEETTCS------SEEEEETTTTEEEEECTT-TSCG-GGCEEEEE
T ss_pred cc-------------c-cccceeeeEEEcCCCCEEEEccCCC------CcEEEeCCCCceEEecCC-CcCC-CcccceEE
Confidence 00 1 111111222222 467888666432 289999999999887421 1111 11222333
Q ss_pred E--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECC
Q 010551 150 V--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 150 ~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~ 227 (507)
. ++.|++ |.. +-+.+||+.+.++..... ..+|. ...++++ .+++.|++... +-+.+||+.
T Consensus 524 ~d~~g~lWi-gt~-------~Gl~~~~~~~~~~~~~~~-~gl~~-~~i~~i~-~~~g~lWi~t~-------~Gl~~~~~~ 585 (758)
T 3ott_A 524 CDEDGLLWV-GFH-------GGVMRINPKDESQQSISF-GSFSN-NEILSMT-CVKNSIWVSTT-------NGLWIIDRK 585 (758)
T ss_dssp ECTTSCEEE-EET-------TEEEEECC--CCCCBCCC-CC----CCEEEEE-EETTEEEEEES-------SCEEEEETT
T ss_pred ECCCCCEEE-Eec-------CceEEEecCCCceEEecc-cCCCc-cceEEEE-ECCCCEEEECC-------CCeEEEcCC
Confidence 3 357775 332 238999998888766542 22332 2222333 34676777442 358999999
Q ss_pred CCcEEec
Q 010551 228 TNEWSQP 234 (507)
Q Consensus 228 ~~~W~~~ 234 (507)
+.+....
T Consensus 586 ~~~~~~~ 592 (758)
T 3ott_A 586 TMDARQQ 592 (758)
T ss_dssp TCCEEEC
T ss_pred CceeEEe
Confidence 9887753
No 109
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.92 E-value=0.5 Score=50.04 Aligned_cols=223 Identities=10% Similarity=0.042 Sum_probs=106.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
|+.+|.+-- ..+.....+|+.+...+.|+.+-..... .. ..........+ +++.++++.......
T Consensus 83 G~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~lld~~~l----------~~--~~~~~~~~~~~SPDg~~la~~~~~~G~~ 149 (710)
T 2xdw_A 83 GKRYFYFYN-TGLQNQRVLYVQDSLEGEARVFLDPNIL----------SD--DGTVALRGYAFSEDGEYFAYGLSASGSD 149 (710)
T ss_dssp TTEEEEEEE-CSSCSSCEEEEESSTTSCCEEEECGGGG----------CT--TSCEEEEEEEECTTSSEEEEEEEETTCS
T ss_pred CCEEEEEEE-cCCceEEEEEEEcCCCCCcEEEECHHHh----------cc--CCCEEEEEEEECCCCCEEEEEEcCCCCc
Confidence 555554421 1223345678887777777655322110 00 00111122222 455555544332221
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCC----------CCccCcEEEEECCCCcEE--
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRS----------RKLLNDVHFLDLETMTWD-- 181 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~----------~~~~n~~~~~d~~t~~W~-- 181 (507)
...++++|+.++........+ .. ....+.. +++.++++..+.. ......++++++.+....
T Consensus 150 -~~~i~v~d~~tg~~~~~~~~~----~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~ 223 (710)
T 2xdw_A 150 -WVTIKFMKVDGAKELPDVLER----VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI 223 (710)
T ss_dssp -CEEEEEEETTTTEEEEEEEEE----EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE
T ss_pred -eEEEEEEECCCCCCCcccccC----cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce
Confidence 346999999999887643211 11 1122222 4444444433221 123456999999887642
Q ss_pred EeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC------C--cEEecccCCCCCCCCCccEEEEEC
Q 010551 182 AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT------N--EWSQPEIKGDLVTGRAGHAGITID 253 (507)
Q Consensus 182 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~------~--~W~~~~~~~~~p~~r~~~~~~~~~ 253 (507)
.+.. ....+........-.++..+++.........++++++|+.+ . .+..+... ...........+
T Consensus 224 ~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~----~~~~~~~~s~dg 297 (710)
T 2xdw_A 224 LCAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN----FEGEYDYVTNEG 297 (710)
T ss_dssp EEEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS----SSSCEEEEEEET
T ss_pred EEec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC----CCcEEEEEeccC
Confidence 2211 11112222233333444344443322222257899999876 4 56665321 111111222335
Q ss_pred CeEEEEeccCCCCCcceEEEEECCCC---cEEEecc
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTKL---AWSILTS 286 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~~---~W~~v~~ 286 (507)
+.+|+.+... .....++++|+.+. .|+.+..
T Consensus 298 ~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 298 TVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp TEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEEC
T ss_pred CEEEEEECCC--CCCCEEEEEeCCCCCcccceeccC
Confidence 6777775432 22457999998875 5887743
No 110
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.91 E-value=0.23 Score=47.61 Aligned_cols=139 Identities=14% Similarity=0.140 Sum_probs=63.3
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCc-eeeeccccccCCCc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLA-WSNLRLETELDADK 78 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~~ 78 (507)
|..+.+||+....|..+.. .......-.++.. ++.+++.|+.+ ..+.+||+.++. |.........
T Consensus 32 d~~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~~~~~---- 99 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHART---FSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWKQTLVLLRL---- 99 (377)
T ss_dssp SSCBCEEEEETTEEEECCC---BCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCCCEEECCCC----
T ss_pred CCEEEEEEccCCceEEEEE---EecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCceeeeeEeccc----
Confidence 4557778888877776653 2222222222222 45666777643 358899998876 5544332210
Q ss_pred cccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCc-EEEeecCCCCCCCCcCcEEEEE--CCE
Q 010551 79 TEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVTRGGHSVTLV--GSR 153 (507)
Q Consensus 79 ~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~ 153 (507)
......+.+ ++.+++.|+.+. .+.+||+.++. |...... ..+. .....++.+ ++.
T Consensus 100 ------------~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 100 ------------NRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHL-KRPL-RSTILSLDWHPNNV 159 (377)
T ss_dssp ------------SSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEE-CSSC-CSCEEEEEECTTSS
T ss_pred ------------CCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEe-eccc-CCCeEEEEEcCCCC
Confidence 111222222 455666666432 37788887764 3222210 1111 112223333 456
Q ss_pred EEEEcCCCCCCCccCcEEEEECCCC
Q 010551 154 LIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 154 iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
+++.|+.++ .+.+||+.+.
T Consensus 160 ~l~~~~~d~------~i~iwd~~~~ 178 (377)
T 3dwl_C 160 LLAAGCADR------KAYVLSAYVR 178 (377)
T ss_dssp EEEEEESSS------CEEEEEECCS
T ss_pred EEEEEeCCC------EEEEEEEEec
Confidence 777777653 4888887543
No 111
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.91 E-value=1.1 Score=41.51 Aligned_cols=247 Identities=11% Similarity=0.034 Sum_probs=117.3
Q ss_pred CCEEEEEcCCC--CCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-C-CEEEEEeccCCC
Q 010551 37 DQKLYIVGGSR--NGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~ 112 (507)
++.||+..+.. .+.....+++||+.++.+..+..... . .....-++++.. + ++||+....
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~------------~-~~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV------------N-GYGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE------------T-TEECCEEEEEECSSSSEEEEEETT---
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc------------C-CCCCCCceEEEecCCCcEEEEECC---
Confidence 56788871100 01123469999998888876543100 0 000111233332 4 688887541
Q ss_pred CCCcceEEEEECCCCcEEEe-ecCCCCCCCCcCcEEEEE--CCEEEEEcCCC---------CCCCccCcEEEEECCCCcE
Q 010551 113 SSDSMIVRFIDLETNLCGVM-ETSGKVPVTRGGHSVTLV--GSRLIIFGGED---------RSRKLLNDVHFLDLETMTW 180 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~-~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~---------~~~~~~n~~~~~d~~t~~W 180 (507)
..+++||+. ++...+ ... ....+......+.+ ++.+|+....+ ......+.+++||+. .+.
T Consensus 92 ----~~l~~~d~~-g~~~~~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 92 ----LGLLVVQTD-GTFEEIAKKD-SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp ----TEEEEEETT-SCEEECCSBC-TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred ----CCEEEEeCC-CCEEEEEecc-CCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 259999998 877655 321 11111111222333 45787765432 111123569999987 665
Q ss_pred EEeccCCCCCCCCCCceEEEE----cCC-EEEEEcCCCCCCCCCcEEEEECC-CCcEEecccCCCCCCC--CCccEEEEE
Q 010551 181 DAVEVTQTPPAPRYDHSAALH----ANR-YLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTG--RAGHAGITI 252 (507)
Q Consensus 181 ~~~~~~~~~p~~r~~~~~~~~----~~~-~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~--r~~~~~~~~ 252 (507)
..+..... ....++.. .++ .+|+.... .+.+++||+. ++...........+.. .....++..
T Consensus 165 ~~~~~~~~-----~~~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 165 IQVDTAFQ-----FPNGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp EEEEEEES-----SEEEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred EEeccCCC-----CcceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 54422101 11233334 444 46665432 2468899876 4444321111111111 111223332
Q ss_pred -CCeEEEEeccCCCCCcceEEEEECCCCcE-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEEC
Q 010551 253 -DENWYIVGGGDNNNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~~~~~~d~~~~~W-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 330 (507)
++++||..... ..+.+||+.+... ..+. .+. ....+.+..+....||+.... .+.+++|++
T Consensus 235 ~~G~l~v~~~~~-----~~i~~~d~~~g~~~~~~~-~~~-------~~~~~i~~~~dg~~l~v~~~~----~~~l~~~~~ 297 (314)
T 1pjx_A 235 EDNNLLVANWGS-----SHIEVFGPDGGQPKMRIR-CPF-------EKPSNLHFKPQTKTIFVTEHE----NNAVWKFEW 297 (314)
T ss_dssp TTCCEEEEEETT-----TEEEEECTTCBSCSEEEE-CSS-------SCEEEEEECTTSSEEEEEETT----TTEEEEEEC
T ss_pred CCCCEEEEEcCC-----CEEEEEcCCCCcEeEEEe-CCC-------CCceeEEECCCCCEEEEEeCC----CCeEEEEeC
Confidence 46777764321 2588899875432 2222 211 112222232334457765432 257889998
Q ss_pred CCC
Q 010551 331 KPR 333 (507)
Q Consensus 331 ~~~ 333 (507)
...
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 643
No 112
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.90 E-value=0.81 Score=43.91 Aligned_cols=155 Identities=6% Similarity=0.007 Sum_probs=74.8
Q ss_pred EEEEEeccCCCCCCcceEEEEECCCCc------EEEeecCCCCCCC--CcC-cEEEEE-----CCEE-EEEcCCCCCCCc
Q 010551 102 KLLILGGHYKKSSDSMIVRFIDLETNL------CGVMETSGKVPVT--RGG-HSVTLV-----GSRL-IIFGGEDRSRKL 166 (507)
Q Consensus 102 ~lyv~GG~~~~~~~~~~~~~yd~~t~~------W~~~~~~g~~p~~--r~~-~~~~~~-----~~~i-y~~GG~~~~~~~ 166 (507)
.+++.|+.+. .+.+||+.++. +..+.. .+.. ... .+++.. ++.. ++.|+.+
T Consensus 82 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d----- 147 (397)
T 1sq9_A 82 CLVATTSFSG------DLLFYRITREDETKKVIFEKLDL---LDSDMKKHSFWALKWGASNDRLLSHRLVATDVK----- 147 (397)
T ss_dssp EEEEEEETTS------CEEEEEEEECTTTCCEEEEEECC---SCTTGGGSCEEEEEEECCC----CEEEEEEETT-----
T ss_pred cEEEEEcCCC------CEEEEEccCCcccccccceeecc---cccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----
Confidence 6777776532 37888877776 555541 1100 111 223333 3455 7777754
Q ss_pred cCcEEEEECCC------Cc---EE---Eecc--CCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 167 LNDVHFLDLET------MT---WD---AVEV--TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 167 ~n~~~~~d~~t------~~---W~---~~~~--~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+.+.+||+.+ .. |. .+.. ...........++....++ +++.|+.+ ..+.+||+.+....
T Consensus 148 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 148 -GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPL 220 (397)
T ss_dssp -SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEE
T ss_pred -CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCcee
Confidence 3477887765 22 11 1110 0000112223344445566 77777654 36899999877644
Q ss_pred ecccCCC--C-CCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 233 QPEIKGD--L-VTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 233 ~~~~~~~--~-p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
..-. .. . +....-.+++.. ++.+++.|+.++ ....+.+||+.+..
T Consensus 221 ~~~~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 221 YNFE-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGE 269 (397)
T ss_dssp EEEE-CCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCC
T ss_pred EEEe-ccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCc
Confidence 3211 10 0 001111222222 456777766431 11358899987764
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.89 E-value=1.1 Score=41.38 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=31.4
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCcccc-ceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCcee
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYK-HAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWS 66 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~ 66 (507)
|..+.++|+.+.+-..+-. ....... .+++.. ++..++.|+.+ ..+.++|..++.-.
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRL 102 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeE
Confidence 4556777888777665432 1111111 122222 55667777644 35888998887543
No 114
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.88 E-value=0.79 Score=43.62 Aligned_cols=185 Identities=11% Similarity=0.081 Sum_probs=88.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
++..++.|+.+. .+.++|+.+++-...- .| -.....++.+ +..+++.|+.+. .+.++|+.
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~~~-~~----h~~~V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLSSY-RA----HAAQVTCVAASPHKDSVFLSCSEDN------RILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE-CC----CSSCEEEEEECSSCTTEEEEEETTS------CEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE-cC----cCCceEEEEecCCCCCceeeecccc------cccccccc
Confidence 566666676543 3889999888643321 11 1111222333 235777777653 48899998
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEE--cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
+.+-...-. ..........+.+ .+..+++.|+.+ ..+.+||+.+++-... .......-..+.+
T Consensus 201 ~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~~~~~-----~~~h~~~v~~v~fsp 267 (344)
T 4gqb_B 201 CPKPASQIG---CSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTSCVLS-----SAVHSQCVTGLVFSP 267 (344)
T ss_dssp SSSCEEECC-------CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--CCEE-----EECCSSCEEEEEECS
T ss_pred ccceeeeee---cceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCcEEEE-----EcCCCCCEEEEEEcc
Confidence 776433211 0111111122222 244577777654 3588899876542211 0011111122223
Q ss_pred C-CeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 253 D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 253 ~-~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+ .++++.|+.++ .+.++|..+..-..+.... +...++...+.+..|++.||.++ .+..+++.
T Consensus 268 ~g~~~lasgs~D~-----~i~vwd~~~~~~~~~~~H~--------~~V~~v~~sp~~~~llas~s~D~----~v~~w~v~ 330 (344)
T 4gqb_B 268 HSVPFLASLSEDC-----SLAVLDSSLSELFRSQAHR--------DFVRDATWSPLNHSLLTTVGWDH----QVVHHVVP 330 (344)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTCCEEEEECCCS--------SCEEEEEECSSSTTEEEEEETTS----CEEEEECC
T ss_pred CCCeEEEEEeCCC-----eEEEEECCCCcEEEEcCCC--------CCEEEEEEeCCCCeEEEEEcCCC----eEEEEECC
Confidence 2 35666666443 3778888877533321110 11222222233446777788764 34455543
No 115
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.87 E-value=1.4 Score=45.39 Aligned_cols=110 Identities=12% Similarity=0.094 Sum_probs=60.8
Q ss_pred CCCeEeeC-CCC--ceEEeecCCCCCCc-----cccceEEEECCEEEEEcCCCCCccCCceEEEEccCC--ceeeecccc
Q 010551 3 SGSWHLEL-PYD--LWVTLPVSGARPSP-----RYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSL--AWSNLRLET 72 (507)
Q Consensus 3 ~~~~~~d~-~~~--~W~~~~~~~~~p~~-----r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~~ 72 (507)
..++++|. .+. .|+.-........+ ....+.++.++.||+... ...++.+|..++ .|+.-....
T Consensus 73 ~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~ 146 (571)
T 2ad6_A 73 NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGHLLALDAKTGKINWEVEVCDP 146 (571)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCCG
T ss_pred CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCEEEEEECCCCCEEEEecCCCC
Confidence 34788998 554 68875421100000 112344566889988753 246999999887 486532211
Q ss_pred ccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEee
Q 010551 73 ELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVME 133 (507)
Q Consensus 73 ~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 133 (507)
. .......+.++.++.||+-.+.... .....++.||+.|++ |+.-.
T Consensus 147 ~--------------~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 147 K--------------VGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp G--------------GTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEES
T ss_pred C--------------ccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEcc
Confidence 0 0001122334568888775432111 113469999999885 87543
No 116
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.85 E-value=0.1 Score=39.85 Aligned_cols=26 Identities=31% Similarity=0.406 Sum_probs=10.3
Q ss_pred HhhHHHhhhhhhhhHHHHHHHHHHHH
Q 010551 437 QGQLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 437 ~~~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
+.++.....+..+.+.++..++++++
T Consensus 29 e~~~k~~e~~~~~~E~Ei~sL~kk~~ 54 (101)
T 3u1c_A 29 EADKKAAEERSKQLEDDIVQLEKQLR 54 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 33333333333444444444444433
No 117
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.82 E-value=1.1 Score=40.95 Aligned_cols=218 Identities=9% Similarity=-0.005 Sum_probs=111.5
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.+..||+. .+...++... .....+++++- ++.||+.... ...++.||+. +.+.......
T Consensus 42 ~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~---------- 101 (300)
T 2qc5_A 42 KISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQ---------- 101 (300)
T ss_dssp EEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSS----------
T ss_pred eEEEECCC-CceEEEECCC---CCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCC----------
Confidence 45677777 6776655311 11222333333 5678886532 2458999988 6765443211
Q ss_pred CCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcC
Q 010551 83 GLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGG 159 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG 159 (507)
....-++++.. ++.+|+.... ...++.||+. ++...... +..........+ ++++|+...
T Consensus 102 ------~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 102 ------PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDL----PNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp ------TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEEC----SSTTCCEEEEEECTTSSEEEEET
T ss_pred ------CCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccC----CCCCCCceeEEECCCCCEEEEec
Confidence 01112333333 5778876432 2358999988 76665432 211112222333 356776543
Q ss_pred CCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCC
Q 010551 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 239 (507)
Q Consensus 160 ~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 239 (507)
. .+.+++||+ +++...+...+.. ..-.+++.-.++.+|+.... .+.+++||+ ++.+.....
T Consensus 165 ~------~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~--- 225 (300)
T 2qc5_A 165 Q------NNSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYDI--- 225 (300)
T ss_dssp T------TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC---
T ss_pred C------CCeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEEC---
Confidence 2 246899998 6777665431111 11123333335557775432 236889998 566655321
Q ss_pred CCCCCCc-cEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEe
Q 010551 240 LVTGRAG-HAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 240 ~p~~r~~-~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v 284 (507)
+..... ++++.- ++++|+.... .+.+.+||+ +......
T Consensus 226 -~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 226 -PTPNARPHAITAGKNSEIWFTEWG-----ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp -SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECT-TSCEEEE
T ss_pred -CCCCCCceEEEECCCCCEEEeccC-----CCeEEEECC-CCcEEEE
Confidence 111112 233332 4577776421 235888988 4555544
No 118
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.81 E-value=0.67 Score=45.25 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=36.0
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++..++.|+.+ ..+.+||+.++.-...-. +. .....++.+ ++.+++.|+.++ .+.++|+.+
T Consensus 203 ~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~-~h----~~~v~~~~~~~~g~~l~s~s~D~------~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASRD------KTIKMWEVQTGYCVKTFT-GH----REWVRMVRPNQDGTLIASCSNDQ------TVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEE-CC----SSCEEEEEECTTSSEEEEEETTS------CEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEe-CC----CccEEEEEECCCCCEEEEEcCCC------eEEEEECCC
Confidence 45556666643 348899998886433211 11 111222233 456777777653 478888877
Q ss_pred CcEE
Q 010551 178 MTWD 181 (507)
Q Consensus 178 ~~W~ 181 (507)
....
T Consensus 266 ~~~~ 269 (410)
T 1vyh_C 266 KECK 269 (410)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 6543
No 119
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.76 E-value=0.32 Score=46.24 Aligned_cols=139 Identities=9% Similarity=0.031 Sum_probs=68.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..+..+..+...... ......+.+ ++.+++.|+.+.
T Consensus 72 ~g~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~s~D~--- 127 (345)
T 3fm0_A 72 CGNYLASASFD-----ATTCIWKKNQDDFECVTTLEGH----------------ENEVKSVAWAPSGNLLATCSRDK--- 127 (345)
T ss_dssp TSSEEEEEETT-----SCEEEEEECCC-EEEEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS---
T ss_pred CCCEEEEEECC-----CcEEEEEccCCCeEEEEEccCC----------------CCCceEEEEeCCCCEEEEEECCC---
Confidence 45666677644 3577888877776554433210 111222333 456667776542
Q ss_pred CcceEEEEECCCCc-EEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 115 DSMIVRFIDLETNL-CGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
.+.+||+.+.. +..+... ........++.+ ++.+++.|+.+. .+.+||..+..|..+......
T Consensus 128 ---~v~iwd~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~s~d~------~i~~w~~~~~~~~~~~~~~~h-- 193 (345)
T 3fm0_A 128 ---SVWVWEVDEEDEYECVSVL---NSHTQDVKHVVWHPSQELLASASYDD------TVKLYREEEDDWVCCATLEGH-- 193 (345)
T ss_dssp ---CEEEEEECTTSCEEEEEEE---CCCCSCEEEEEECSSSSCEEEEETTS------CEEEEEEETTEEEEEEEECCC--
T ss_pred ---eEEEEECCCCCCeEEEEEe---cCcCCCeEEEEECCCCCEEEEEeCCC------cEEEEEecCCCEEEEEEecCC--
Confidence 37788876653 3332211 111111222333 456667777653 488888888887654321110
Q ss_pred CCCCceEEEEcCCEEEEEcCCC
Q 010551 192 PRYDHSAALHANRYLIVFGGCS 213 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~v~GG~~ 213 (507)
...-.+++...++.+++.|+.+
T Consensus 194 ~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 194 ESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEeCC
Confidence 1111222333445566677654
No 120
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.75 E-value=2.4 Score=44.48 Aligned_cols=194 Identities=14% Similarity=0.022 Sum_probs=96.3
Q ss_pred CceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCC-cE
Q 010551 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETN-LC 129 (507)
Q Consensus 53 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~-~W 129 (507)
..++++|+.++.-..+.... ........+.+ +++.++++..+... ....++.+|+.++ ..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~----------------~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~ 297 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGE----------------PKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFV 297 (706)
T ss_dssp EEEEEEETTTTEEEECCCCS----------------CTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEE
T ss_pred eEEEEEECCCCceEeeccCC----------------CCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCcee
Confidence 56899999887654443211 01112222333 44444444333222 2567999999998 77
Q ss_pred EEeecCCCCC-CCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEE--cCC
Q 010551 130 GVMETSGKVP-VTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH--ANR 204 (507)
Q Consensus 130 ~~~~~~g~~p-~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 204 (507)
..+....... .......+..- ++++++.+..++ ...++.+|........+.. + .........+ +++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~-~----~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 298 RTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTK-G----EWEVTNFAGFDPKGT 368 (706)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCC-S----SSCEEEEEEECTTSS
T ss_pred eEEEEccCCCeECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCC-C----CeEEEeeeEEcCCCC
Confidence 6654211110 00001112222 567665555442 4568888877666666632 1 1111111222 234
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 205 YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 205 ~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
.||+.+.. .......+|.+|+.++....+.. ....++++.. +++.+++.... ......++++|+.+..
T Consensus 369 ~l~~~~~~-~~~~~~~l~~~d~~~~~~~~l~~------~~~~~~~~~spdg~~l~~~~~~-~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 369 RLYFESTE-ASPLERHFYCIDIKGGKTKDLTP------ESGMHRTQLSPDGSAIIDIFQS-PTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEESS-SCTTCBEEEEEETTCCCCEESCC------SSSEEEEEECTTSSEEEEEEEC-SSCSCEEEEEESSSCE
T ss_pred EEEEEecC-CCCceEEEEEEEcCCCCceeccC------CCceEEEEECCCCCEEEEEecC-CCCCcEEEEEECCCCe
Confidence 45554443 32233579999998877655421 1112232222 44555554322 2234568899988776
No 121
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.72 E-value=0.78 Score=42.47 Aligned_cols=199 Identities=8% Similarity=-0.041 Sum_probs=97.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
++.||+.... ...++.||+.++........ .+..+.+..-++++|+.. .
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~------------------~~~~~i~~~~dG~l~v~~--------~ 72 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMD------------------APVSSVALRQSGGYVATI--------G 72 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEECS------------------SCEEEEEEBTTSSEEEEE--------T
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeCC------------------CceEEEEECCCCCEEEEE--------C
Confidence 4678887642 24689999998765443221 121222222255665542 2
Q ss_pred ceEEEEECCCCcEEEeecCCC-CCCCCcCcEEEEECCEEEEEcCCCCC------CCccCcEEEEECCCCcEEEeccCCCC
Q 010551 117 MIVRFIDLETNLCGVMETSGK-VPVTRGGHSVTLVGSRLIIFGGEDRS------RKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~-~p~~r~~~~~~~~~~~iy~~GG~~~~------~~~~n~~~~~d~~t~~W~~~~~~~~~ 189 (507)
..+++||+.+++++.+..... .+..+....++.-++++|+- ..... ......++++|+. .+...+... .
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~-~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~--~ 148 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAG-TMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQ--V 148 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEE-EEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEE--E
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEe-cCCcccccccccCCCcEEEEEECC-CCEEEEeec--c
Confidence 359999999999887753211 11112211122224576653 22111 0123568888875 333333211 1
Q ss_pred CCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEEC--CCCcEEecccCCCCCC-CCCccEEEEE-CCeEEEEeccCC
Q 010551 190 PAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDL--QTNEWSQPEIKGDLVT-GRAGHAGITI-DENWYIVGGGDN 264 (507)
Q Consensus 190 p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~--~~~~W~~~~~~~~~p~-~r~~~~~~~~-~~~l~v~GG~~~ 264 (507)
....+++... ++.+|+.... .+.|++||+ .++...........+. ......+++- ++++||.....
T Consensus 149 ---~~pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~- 219 (297)
T 3g4e_A 149 ---DISNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG- 219 (297)
T ss_dssp ---SBEEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-
T ss_pred ---ccccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-
Confidence 1112333333 4457776442 246888886 4555432111011111 1111233332 46788764211
Q ss_pred CCCcceEEEEECCCCcEEE
Q 010551 265 NNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 265 ~~~~~~~~~~d~~~~~W~~ 283 (507)
..+++||+.+.....
T Consensus 220 ----~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 220 ----GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ----TEEEEECTTTCCEEE
T ss_pred ----CEEEEEcCCCceEEE
Confidence 258899998766543
No 122
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.71 E-value=0.78 Score=43.96 Aligned_cols=201 Identities=12% Similarity=0.017 Sum_probs=96.7
Q ss_pred CceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECC-EEEEEeccCCCCCCcceEEEEECCCCcEEE
Q 010551 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGT-KLLILGGHYKKSSDSMIVRFIDLETNLCGV 131 (507)
Q Consensus 53 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 131 (507)
..++++|+.++.-..+...... .... ....-++ .|++... ...++.+|+.++.-..
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~---------------~~~~-~~~spdg~~l~~~~~-------~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGD---------------NTFG-GFLSPDDDALFYVKD-------GRNLMRVDLATLEENV 116 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCB---------------CSSS-CEECTTSSEEEEEET-------TTEEEEEETTTCCEEE
T ss_pred ceEEEEeCCCCceEEeeeCCCC---------------Cccc-eEEcCCCCEEEEEeC-------CCeEEEEECCCCccee
Confidence 4699999998877665432210 1111 1122234 4544432 1369999999988666
Q ss_pred eecCCCCCCCCcCcEEEEE--CCEEEE-Ec--CCCC-------------CCCccCcEEEEECCCCcEEEeccCCCCCCCC
Q 010551 132 METSGKVPVTRGGHSVTLV--GSRLII-FG--GEDR-------------SRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 132 ~~~~g~~p~~r~~~~~~~~--~~~iy~-~G--G~~~-------------~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r 193 (507)
+. ..|........... ++..++ +- +.+. .......++.+|+.+++-..+.... ..
T Consensus 117 ~~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~~ 189 (388)
T 3pe7_A 117 VY---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN----QW 189 (388)
T ss_dssp EE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES----SC
T ss_pred ee---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC----cc
Confidence 54 23332221121222 233222 11 0000 0112367999999988766664311 11
Q ss_pred CCceEEEEc-CCEEEEEcCCCC-CCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcc
Q 010551 194 YDHSAALHA-NRYLIVFGGCSH-SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 194 ~~~~~~~~~-~~~l~v~GG~~~-~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~ 269 (507)
........ ++..+++..... ......+|.+|+.+.....+.. ...... ...... +++.+++..........
T Consensus 190 -~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~ 264 (388)
T 3pe7_A 190 -LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEGES-CTHEFWVPDGSALVYVSYLKGSPDR 264 (388)
T ss_dssp -EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---CCTTEE-EEEEEECTTSSCEEEEEEETTCCCE
T ss_pred -ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---CCCCcc-cccceECCCCCEEEEEecCCCCCcc
Confidence 12223333 444444433221 2234589999998776665521 111001 111222 44433332222222223
Q ss_pred eEEEEECCCCcEEEeccCC
Q 010551 270 ETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 270 ~~~~~d~~~~~W~~v~~~~ 288 (507)
.++++|+.+..-+.+...+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMP 283 (388)
T ss_dssp EEEEECTTTCCEEEEEEEC
T ss_pred eEEEEecCCCceEEEEcCC
Confidence 5999999998876665443
No 123
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.69 E-value=1.4 Score=41.27 Aligned_cols=186 Identities=12% Similarity=0.120 Sum_probs=92.3
Q ss_pred CEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE-ECCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
+.+++.|+.+ ..+.++|+.+++-......+ +.. ..+++. -++..++.|+.+ ..+.+||+.+..
T Consensus 92 ~~~l~s~s~D------~~i~lWd~~~~~~~~~~~~~--~~~--~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~ 155 (321)
T 3ow8_A 92 LPIAASSSLD------AHIRLWDLENGKQIKSIDAG--PVD--AWTLAFSPDSQYLATGTHV------GKVNIFGVESGK 155 (321)
T ss_dssp SSEEEEEETT------SEEEEEETTTTEEEEEEECC--TTC--CCCEEECTTSSEEEEECTT------SEEEEEETTTCS
T ss_pred CCEEEEEeCC------CcEEEEECCCCCEEEEEeCC--Ccc--EEEEEECCCCCEEEEEcCC------CcEEEEEcCCCc
Confidence 4455555543 34888999888654332211 111 112222 245666777654 358888987765
Q ss_pred EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEE
Q 010551 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYI 258 (507)
Q Consensus 180 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v 258 (507)
-...-. .......+++...++.+++.|+.+ ..+.+||+.+++-...- .+. ...-.+++.. ++.+++
T Consensus 156 ~~~~~~----~~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~~-~~h---~~~v~~l~~spd~~~l~ 222 (321)
T 3ow8_A 156 KEYSLD----TRGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHTL-EGH---AMPIRSLTFSPDSQLLV 222 (321)
T ss_dssp EEEEEE----CSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE-CCC---SSCCCEEEECTTSCEEE
T ss_pred eeEEec----CCCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-ccc---CCceeEEEEcCCCCEEE
Confidence 332211 011112233333455577777754 35889999887644321 110 0011122222 456777
Q ss_pred EeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
.|+.++ .+.+||+.+...... +.+.. .. ...+....+..+++.|+.+ ..+.++|+..
T Consensus 223 s~s~dg-----~i~iwd~~~~~~~~~--~~~h~-----~~-v~~~~~sp~~~~l~s~s~D----~~v~iwd~~~ 279 (321)
T 3ow8_A 223 TASDDG-----YIKIYDVQHANLAGT--LSGHA-----SW-VLNVAFCPDDTHFVSSSSD----KSVKVWDVGT 279 (321)
T ss_dssp EECTTS-----CEEEEETTTCCEEEE--ECCCS-----SC-EEEEEECTTSSEEEEEETT----SCEEEEETTT
T ss_pred EEcCCC-----eEEEEECCCcceeEE--EcCCC-----Cc-eEEEEECCCCCEEEEEeCC----CcEEEEeCCC
Confidence 776543 377889877654322 21110 11 2222333333455667655 3466677654
No 124
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.68 E-value=0.027 Score=63.44 Aligned_cols=6 Identities=0% Similarity=-0.158 Sum_probs=2.7
Q ss_pred CceEEe
Q 010551 13 DLWVTL 18 (507)
Q Consensus 13 ~~W~~~ 18 (507)
.-|...
T Consensus 41 ~~~~~~ 46 (1184)
T 1i84_S 41 HGFEAA 46 (1184)
T ss_dssp TSSEEE
T ss_pred CCeEEE
Confidence 345543
No 125
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.67 E-value=0.18 Score=47.98 Aligned_cols=185 Identities=9% Similarity=0.058 Sum_probs=91.0
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++.+++.||.+. .+.+||..++.|...... ...-.....++.+ ++..++.|+.+. .+.++|..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEE--CSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeee--ccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccC
Confidence 566777777543 378888888887643311 0011112233333 456777777653 477788777
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc-EEecccCCCCCCCCCccEEEEE--CC
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI--DE 254 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~--~~ 254 (507)
..+..+..... ....-.+++...++.+++.|+.++ .+.++|+.+.. +..+.... ........+.. ++
T Consensus 93 ~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 93 DDFECVTTLEG--HENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLN---SHTQDVKHVVWHPSQ 162 (345)
T ss_dssp C-EEEEEEECC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEEC---CCCSCEEEEEECSSS
T ss_pred CCeEEEEEccC--CCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEec---CcCCCeEEEEECCCC
Confidence 76654432111 011112233334555777777543 57888876542 32221111 11111122222 35
Q ss_pred eEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCC
Q 010551 255 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 255 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
.+++.|+.++ .+.+||..+..|..+..+.+.. . ....+....+..+++.|+.++
T Consensus 163 ~~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~h~-----~-~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 163 ELLASASYDD-----TVKLYREEEDDWVCCATLEGHE-----S-TVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEETTS-----CEEEEEEETTEEEEEEEECCCS-----S-CEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEeCCC-----cEEEEEecCCCEEEEEEecCCC-----C-ceEEEEECCCCCEEEEEeCCC
Confidence 6667766443 3678888888776554443221 1 122233333334556676553
No 126
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.67 E-value=0.073 Score=58.80 Aligned_cols=14 Identities=14% Similarity=0.605 Sum_probs=6.6
Q ss_pred CeEeeCCCCceEEee
Q 010551 5 SWHLELPYDLWVTLP 19 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~ 19 (507)
+|+-|+. ..|..-.
T Consensus 13 vwv~~~~-~~~~~~~ 26 (1080)
T 2dfs_A 13 VWIPDPE-EVWKSAE 26 (1080)
T ss_dssp EEEEETT-TEEEEEE
T ss_pred EEEECCC-CceEEEE
Confidence 3443432 4566544
No 127
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.66 E-value=0.21 Score=47.88 Aligned_cols=185 Identities=12% Similarity=0.051 Sum_probs=88.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
++..++.|+.+. .+.+||..++.-...-. . ......++.+ ++.+++.||.++ .+.++|+.
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~~---~--h~~~v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSYN---A--HSSEVNCVAACPGKDTIFLSCGEDG------RILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEEC---C--CSSCEEEEEECTTCSSCEEEEETTS------CEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEc---C--CCCCEEEEEEccCCCceeeeeccCC------ceEEEECC
Confidence 456666666432 38889999886543321 1 1111222333 235677777553 48888887
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEE--cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
+.+-..... ..........+.+ .++.+++.|+.+ ..+.+||+.+..-... ..........+.+
T Consensus 213 ~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~~~-----~~~~~~~v~~l~~sp 279 (357)
T 4g56_B 213 KPKPATRID---FCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSAQT-----SAVHSQNITGLAYSY 279 (357)
T ss_dssp SSSCBCBCC---CTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGCEE-----ECCCSSCEEEEEECS
T ss_pred CCceeeeee---eccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEeEE-----EeccceeEEEEEEcC
Confidence 765322211 1111111222333 234477777654 3588899876542211 0111111122223
Q ss_pred C-CeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 253 D-ENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 253 ~-~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+ .++++.|+.++ .+.++|+.+..-....... ....+++..+.+..+++.||.++ .+.++++.
T Consensus 280 ~~~~~lasgs~D~-----~i~iwd~~~~~~~~~~~H~--------~~V~~vafsP~d~~~l~s~s~Dg----~v~iW~~~ 342 (357)
T 4g56_B 280 HSSPFLASISEDC-----TVAVLDADFSEVFRDLSHR--------DFVTGVAWSPLDHSKFTTVGWDH----KVLHHHLP 342 (357)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTSCEEEEECCCS--------SCEEEEEECSSSTTEEEEEETTS----CEEEEECC
T ss_pred CCCCEEEEEeCCC-----EEEEEECCCCcEeEECCCC--------CCEEEEEEeCCCCCEEEEEcCCC----eEEEEECC
Confidence 2 35666666433 3778898877543321110 11122222222334666777653 46666664
No 128
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.66 E-value=1.1 Score=41.68 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=52.7
Q ss_pred EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 153 RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 153 ~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
.+++.||.+. .+.+||+.+.+....-. + ....-.+++...++.+++.|+.+ ..+.+||+.+..-.
T Consensus 186 ~~~~s~~~d~------~i~i~d~~~~~~~~~~~-~---h~~~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~~~~~ 250 (340)
T 4aow_A 186 PIIVSCGWDK------LVKVWNLANCKLKTNHI-G---HTGYLNTVTVSPDGSLCASGGKD-----GQAMLWDLNEGKHL 250 (340)
T ss_dssp CEEEEEETTS------CEEEEETTTTEEEEEEC-C---CSSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEEE
T ss_pred cEEEEEcCCC------EEEEEECCCCceeeEec-C---CCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEeccCcee
Confidence 4556666542 48889998876543321 1 11111223333455577777754 35888898876543
Q ss_pred ecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 233 QPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 233 ~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
.... . ...-.+++...+..++.++.+ ..+.++|+.+..
T Consensus 251 ~~~~-~----~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~ 288 (340)
T 4aow_A 251 YTLD-G----GDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKI 288 (340)
T ss_dssp EEEE-C----SSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTE
T ss_pred eeec-C----CceEEeeecCCCCceeeccCC-----CEEEEEECCCCe
Confidence 3211 1 111122233334445555533 247788887764
No 129
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.66 E-value=1 Score=43.13 Aligned_cols=178 Identities=10% Similarity=0.004 Sum_probs=89.1
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEEC--CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcc
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFD--QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 79 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~--~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~ 79 (507)
|..+.++|+........... ......-.+++... +.+++.|+.+ ..+.++|+.+.....+.....
T Consensus 95 dg~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~------ 161 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQG--MGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVFAKTDS------ 161 (383)
T ss_dssp TSCEEEEETTSTTCEEEECC--CSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEEECCCC------
T ss_pred CCeEEEEeCCCcccceeeec--CCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEEeccCC------
Confidence 44567778887777665421 01111112233333 3666666643 358899998765554443210
Q ss_pred ccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCE-E
Q 010551 80 EDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSR-L 154 (507)
Q Consensus 80 ~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~-i 154 (507)
.......+.+ ++.+++.|+.+ ..+.+||+....-..+.. ......++.+ ++. +
T Consensus 162 ----------~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~------h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 162 ----------WDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKL------HKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp ----------SSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEEC------SSSCEEEEEECSSCTTE
T ss_pred ----------CCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEecc------CCCcEEEEEECCCCCCE
Confidence 0111112222 45566666543 358899985443333321 1112223333 233 7
Q ss_pred EEEcCCCCCCCccCcEEEEECCC----CcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 155 IIFGGEDRSRKLLNDVHFLDLET----MTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 155 y~~GG~~~~~~~~n~~~~~d~~t----~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++.|+.+. .+.+||+.+ ........ ....-.+++... ++.+++.|+.+ +.+.+||+.+.
T Consensus 220 l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~~ 283 (383)
T 3ei3_B 220 MATSSVDA------TVKLWDLRNIKDKNSYIAEMP-----HEKPVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYDW 283 (383)
T ss_dssp EEEEETTS------EEEEEEGGGCCSTTCEEEEEE-----CSSCEEEEEECTTTSCEEEEEESS-----SEEEEEETTBT
T ss_pred EEEEeCCC------EEEEEeCCCCCcccceEEEec-----CCCceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCCC
Confidence 77777643 588899876 33322211 111122233333 45566666654 36889998765
Q ss_pred c
Q 010551 230 E 230 (507)
Q Consensus 230 ~ 230 (507)
.
T Consensus 284 ~ 284 (383)
T 3ei3_B 284 S 284 (383)
T ss_dssp T
T ss_pred c
Confidence 4
No 130
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.65 E-value=0.15 Score=48.31 Aligned_cols=106 Identities=19% Similarity=0.232 Sum_probs=52.7
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEE-----ECCEEEEEcCCCCCCCccCcEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTL-----VGSRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~-----~~~~iy~~GG~~~~~~~~n~~~~ 172 (507)
++.+++.|+.+. .+.+||+.++. ...+... .....+.-.+++. .++.+++.|+.+ ..+.+
T Consensus 128 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------~~i~i 194 (357)
T 3i2n_A 128 GAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAGYDN------GDIKL 194 (357)
T ss_dssp CCCEEEEEETTS------CEEEECTTSCSSCSEEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEEETT------SEEEE
T ss_pred CccEEEEEeCCC------eEEEEeCCCCCCcceecccc-CCCCCCceEEEEEEeccCCCCCEEEEEccC------CeEEE
Confidence 455666666432 38889988765 3333210 0000111112221 355667777654 35899
Q ss_pred EECCCCcEEEeccCCCCCCCCCCceEEEEc---CCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 173 LDLETMTWDAVEVTQTPPAPRYDHSAALHA---NRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 173 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~---~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
||+.+..-...... .....++.... ++..++.|+.+ ..+.+||+.+
T Consensus 195 ~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 243 (357)
T 3i2n_A 195 FDLRNMALRWETNI-----KNGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRT 243 (357)
T ss_dssp EETTTTEEEEEEEC-----SSCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEE
T ss_pred EECccCceeeecCC-----CCceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcC
Confidence 99988764333211 11122233332 44466666644 3577787654
No 131
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.62 E-value=1.6 Score=41.42 Aligned_cols=111 Identities=10% Similarity=0.044 Sum_probs=51.7
Q ss_pred EEEEcCCCCCccCCc--eEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCc
Q 010551 40 LYIVGGSRNGRFLSD--VQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDS 116 (507)
Q Consensus 40 iyi~GG~~~~~~~~~--~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 116 (507)
.+++|.+..+. ... ++.+|+.++.+..+... .. ....+.+..- +..||+.+.... ....
T Consensus 15 ~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~-~~---------------~~p~~l~~spdg~~l~~~~~~~~-~~~~ 76 (361)
T 3scy_A 15 TMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDA-EV---------------ANPSYLIPSADGKFVYSVNEFSK-DQAA 76 (361)
T ss_dssp EEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEE-EC---------------SCCCSEEECTTSSEEEEEECCSS-TTCE
T ss_pred EEEEEeccCCC-CCCEEEEEEeCCCCCEEEeecc-cC---------------CCCceEEECCCCCEEEEEEccCC-CCCc
Confidence 34456544321 233 45557778887766543 11 1111111122 345666654321 1113
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECC-EEEEEcCCCCCCCccCcEEEEECCC
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
-.+|.++..++..+.+.. .+..........+++ .||+.... .+.+.+|++.+
T Consensus 77 v~~~~~~~~~g~~~~~~~---~~~~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~ 129 (361)
T 3scy_A 77 VSAFAFDKEKGTLHLLNT---QKTMGADPCYLTTNGKNIVTANYS------GGSITVFPIGQ 129 (361)
T ss_dssp EEEEEEETTTTEEEEEEE---EECSSSCEEEEEECSSEEEEEETT------TTEEEEEEBCT
T ss_pred EEEEEEeCCCCcEEEeeE---eccCCCCcEEEEECCCEEEEEECC------CCEEEEEEeCC
Confidence 345666777788776652 111111112222255 56654432 24588888864
No 132
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.61 E-value=1.2 Score=42.00 Aligned_cols=197 Identities=11% Similarity=0.057 Sum_probs=92.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-...-... ......+.+ ++..++.|+.+
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~l~s~~~d---- 95 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGTLDGH------------------TGTIWSIDVDCFTKYCVTGSAD---- 95 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEEECCC------------------SSCEEEEEECTTSSEEEEEETT----
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhhhhhc------------------CCcEEEEEEcCCCCEEEEEeCC----
Confidence 45666666533 35889998876543221110 111222233 45566666543
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCc----EEEeccCC-
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT----WDAVEVTQ- 187 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~----W~~~~~~~- 187 (507)
..+.+||+.++.-..... .+. ...++.+ ++..++.++.+.. .....+.+||+.+.. +.......
T Consensus 96 --g~i~iwd~~~~~~~~~~~---~~~---~v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 96 --YSIKLWDVSNGQCVATWK---SPV---PVKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp --TEEEEEETTTCCEEEEEE---CSS---CEEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred --CeEEEEECCCCcEEEEee---cCC---CeEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccceeeccccccee
Confidence 358999998887554432 111 1122222 3455555544311 113467777765432 22211100
Q ss_pred -CC--CCCC-CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC-CcEEecccCCCCCCCCCccEEEEE-CCeEEEEec
Q 010551 188 -TP--PAPR-YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGG 261 (507)
Q Consensus 188 -~~--p~~r-~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG 261 (507)
.. .... ...+++...++.+++.|+.+ ..+.+||+.+ ..-..... . ....-.+++.. ++.+++.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVDSID-L---HEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTTEEEEEEE-C---CSSCEEEEEECTTSSEEEEEE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEEEEe-c---CCCceeEEEECCCCCEEEEec
Confidence 00 0000 11222223344466666643 3689999987 33322110 1 11111222222 456666665
Q ss_pred cCCCCCcceEEEEECCCCcEEE
Q 010551 262 GDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
.++ .+.+||+.+.....
T Consensus 238 ~d~-----~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 238 RDT-----NSFLVDVSTLQVLK 254 (369)
T ss_dssp TTS-----EEEEEETTTCCEEE
T ss_pred CCc-----eEEEEECCCCceee
Confidence 432 58899988766443
No 133
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.61 E-value=0.031 Score=61.74 Aligned_cols=17 Identities=12% Similarity=0.429 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHhHHHHH
Q 010551 466 TIENEVQILRQQKSAFE 482 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~ 482 (507)
.|+++.+.+++|++.++
T Consensus 1027 ~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1027 ELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444555555444444
No 134
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=95.60 E-value=0.41 Score=38.37 Aligned_cols=24 Identities=8% Similarity=0.260 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 466 TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.|..+...++++.+.+.+++++..
T Consensus 101 ~L~~~kkkle~e~~~Lk~~led~e 124 (129)
T 2fxo_A 101 ELTAKKRKLEDECSELKRDIDDLE 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555555555555543
No 135
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.59 E-value=0.77 Score=49.15 Aligned_cols=189 Identities=11% Similarity=0.047 Sum_probs=93.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
++.+++.|+.+ ..+.+||..++.....-.... .........-++..++.|+.+
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~----------------~~v~~~~~s~~~~~l~~~~~d------ 76 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSDD------ 76 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS----------------SCEEEEEEEGGGTEEEEEETT------
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCC----------------CcEEEEEEeCCCCEEEEEeCC------
Confidence 45556666532 468899998876543222110 111111112245566666642
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCC-cEEEeccCCCCCCCC
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQTPPAPR 193 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~-~W~~~~~~~~~p~~r 193 (507)
..+.+||..++........ . .....++.+ ++..++.|+.+ ..+.+||+.++ .....-. +. ..
T Consensus 77 g~i~vw~~~~~~~~~~~~~---~--~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~-~~---~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA---H--PDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFE-GH---EH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC---C--SSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEE-CC---SS
T ss_pred CeEEEEECCCCcEEEEEec---C--CCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEc-CC---CC
Confidence 3489999998876543311 1 111222333 34555566643 35888998765 3322211 11 11
Q ss_pred CCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE---CCeEEEEeccCCCCCcc
Q 010551 194 YDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQ 269 (507)
Q Consensus 194 ~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~ 269 (507)
.-.+++... ++.+++.|+.+ ..+.+||+.+..-..... .. .......++.. ++.++++|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~~~l~~~~~dg----- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLT-TG--QERGVNYVDYYPLPDKPYMITASDDL----- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETT-----SEEEEEETTCSSCSEEEE-CC--CTTCCCEEEECCSTTCCEEEEECTTS-----
T ss_pred cEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeEEe-cC--CCCCEEEEEEEECCCCCEEEEEeCCC-----
Confidence 122233333 45577777654 368899986644221110 11 11111222222 456777776443
Q ss_pred eEEEEECCCCc
Q 010551 270 ETIVLNMTKLA 280 (507)
Q Consensus 270 ~~~~~d~~~~~ 280 (507)
.+.+||+.+..
T Consensus 209 ~i~~~d~~~~~ 219 (814)
T 3mkq_A 209 TIKIWDYQTKS 219 (814)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCc
Confidence 57888887765
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.57 E-value=1.6 Score=46.06 Aligned_cols=155 Identities=9% Similarity=-0.011 Sum_probs=71.2
Q ss_pred ceEEEEECCC-CcEEEeecCCCCCCCCcCcEEEEECC-EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCC
Q 010551 117 MIVRFIDLET-NLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 117 ~~~~~yd~~t-~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~ 194 (507)
..++++|+.+ +.-..+... . +....-..++.-++ .|++....... ....++.+|+.+.+...+...........
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~~pDg~~l~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLG-K-EQDIYLARVNWRDPQHLSFQRQSRDQ--KKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEECSSTTCCCEEECCC-S-CSSEEEEEEEEEETTEEEEEEEETTS--SEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCCceEEecCC-C-CcceEEEEEEeCCCCEEEEEEecccC--CeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 3788999988 775554311 0 11111111111333 45544321111 24679999999988776643211000001
Q ss_pred CceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEE
Q 010551 195 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETI 272 (507)
Q Consensus 195 ~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~ 272 (507)
....+...++.+++.++.++ ...+|.+|+... ...+.. + .......+.+ +++.+++.+.........+|
T Consensus 339 ~~~~~~spdg~~~~~~~~~g---~~~l~~~~~~~~-~~~l~~-~----~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTG---FQHLYRIDSKGK-AAALTH-G----NWSVDELLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp CSCCEECTTSCEEEEECTTS---SCEEEEECSSSC-EEESCC-S----SSCEEEEEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred CCceEECCCCeEEEEecCCC---ccEEEEEcCCCC-eeeeee-c----ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 12233334555666555432 357888887665 544421 1 1111122212 44444443333222244577
Q ss_pred EEECCCCcEEEe
Q 010551 273 VLNMTKLAWSIL 284 (507)
Q Consensus 273 ~~d~~~~~W~~v 284 (507)
..+.....-..+
T Consensus 410 ~~~~~g~~~~~l 421 (741)
T 2ecf_A 410 AVPLQGGQPQRL 421 (741)
T ss_dssp EEETTCCCCEEC
T ss_pred EEEcCCCCeeec
Confidence 777655443444
No 137
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.56 E-value=0.94 Score=41.69 Aligned_cols=221 Identities=10% Similarity=0.005 Sum_probs=109.9
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
.+++.||+... ...+... . ...++++.- ++.||+.... ...+++||+.++....+.....
T Consensus 50 ~~i~~~~~~~~-~~~~~~~----~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-------- 110 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHP----S-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFE-------- 110 (296)
T ss_dssp TEEEEEETTSC-EEEEESS----C-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEET--------
T ss_pred CEEEEEECCCC-eEEEECC----C-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccC--------
Confidence 35678888877 6555521 1 112333332 5677776531 2469999998888766543211
Q ss_pred CCCcCCCCCccceeEEEECCEEEEE----eccCC-------CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE
Q 010551 82 SGLLEVLPPMSDHCMVKWGTKLLIL----GGHYK-------KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV 150 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~~~~lyv~----GG~~~-------~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~ 150 (507)
..+..+....++.-+++||+. |.... .......++.|++. ++...+.. ....+ ..++..
T Consensus 111 ----~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~---~gi~~s 180 (296)
T 3e5z_A 111 ----GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR--DRVKP---NGLAFL 180 (296)
T ss_dssp ----TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC--CCSSE---EEEEEC
T ss_pred ----CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec--CCCCC---ccEEEC
Confidence 011112222223336778886 43210 01113479999988 66555432 11111 122222
Q ss_pred -CCEEEEEcCCCCCCCccCcEEEEECC-CCcE-EEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECC
Q 010551 151 -GSRLIIFGGEDRSRKLLNDVHFLDLE-TMTW-DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 151 -~~~iy~~GG~~~~~~~~n~~~~~d~~-t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~ 227 (507)
++++++.... .+.+++||+. +++. ...... ... ...-.+++.-.++.+|+..+ +.|.+||+.
T Consensus 181 ~dg~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~~-------~~v~~~~~~ 245 (296)
T 3e5z_A 181 PSGNLLVSDTG------DNATHRYCLNARGETEYQGVHF-TVE-PGKTDGLRVDAGGLIWASAG-------DGVHVLTPD 245 (296)
T ss_dssp TTSCEEEEETT------TTEEEEEEECSSSCEEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEET-------TEEEEECTT
T ss_pred CCCCEEEEeCC------CCeEEEEEECCCCcCcCCCeEe-eCC-CCCCCeEEECCCCCEEEEcC-------CeEEEECCC
Confidence 4555544332 3469999986 5555 222111 111 11112344445666887651 469999987
Q ss_pred CCcEEecccCCCCCCCCCccEEEEEC---CeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 228 TNEWSQPEIKGDLVTGRAGHAGITID---ENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 228 ~~~W~~~~~~~~~p~~r~~~~~~~~~---~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
......+.. |.. ..+++.-+ +.|||... ..++.|++.+..
T Consensus 246 g~~~~~~~~----~~~--~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~ 288 (296)
T 3e5z_A 246 GDELGRVLT----PQT--TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRG 288 (296)
T ss_dssp SCEEEEEEC----SSC--CCEEEEESTTSCEEEEEET-------TEEEEEECSCCB
T ss_pred CCEEEEEEC----CCC--ceeEEEECCCCCEEEEEcC-------CeEEEEEccccc
Confidence 554444321 111 11222212 25666532 258889887765
No 138
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.54 E-value=1.8 Score=41.43 Aligned_cols=237 Identities=11% Similarity=0.089 Sum_probs=106.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.+||+.++.-........ +......... ++.+++.|+.+.
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~--- 166 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEE----------------TVYSHHMSPVSTKHCLVAVGTRGP--- 166 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSS----------------CEEEEEECSSCSSCCEEEEEESSS---
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCC----------------ceeeeEeecCCCCCcEEEEEcCCC---
Confidence 44566666633 458899998876544332210 1111111111 334666665432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--C-CEEEEEcCCCCCCCccCcEEEEECCCCc--EEEeccCC--
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--G-SRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQ-- 187 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~-~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~~~~~~~-- 187 (507)
.+.+||+.++.-.... ........++.+ + ..+++.|+.++ .+.+||+.+.. ...+....
T Consensus 167 ---~v~~~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~ 232 (408)
T 4a11_B 167 ---KVQLCDLKSGSCSHIL-----QGHRQEILAVSWSPRYDYILATASADS------RVKLWDVRRASGCLITLDQHNGK 232 (408)
T ss_dssp ---SEEEEESSSSCCCEEE-----CCCCSCEEEEEECSSCTTEEEEEETTS------CEEEEETTCSSCCSEECCTTTTC
T ss_pred ---eEEEEeCCCcceeeee-----cCCCCcEEEEEECCCCCcEEEEEcCCC------cEEEEECCCCCcccccccccccc
Confidence 3888998876533221 111112223333 2 24777777653 48888886643 22221100
Q ss_pred ---CC----CCCCCC-ceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEE--EECCeEE
Q 010551 188 ---TP----PAPRYD-HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGI--TIDENWY 257 (507)
Q Consensus 188 ---~~----p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~--~~~~~l~ 257 (507)
.. ...... .+++...++..++.|+.+ +.+.+||+.++.-................... ...+..+
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD-----NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF 307 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE
T ss_pred cceeeccccccccCceeEEEEcCCCCEEEEecCC-----CeEEEEECCCCccceeccccccccccccceeEEecCCCceE
Confidence 00 011111 122233344466666654 35889998876543321111111111111111 1123334
Q ss_pred EEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 258 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 258 v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
++++.+ ..+.+||+.+..-... +.+.. ....+....+.+ .+++.||.++ .+.++++...
T Consensus 308 ~~~~~~-----~~i~v~d~~~~~~~~~--~~~~~-----~~v~~~~~s~~~-~~l~s~~~dg----~i~iw~~~~~ 366 (408)
T 4a11_B 308 VFVPYG-----STIAVYTVYSGEQITM--LKGHY-----KTVDCCVFQSNF-QELYSGSRDC----NILAWVPSLY 366 (408)
T ss_dssp EEEEET-----TEEEEEETTTCCEEEE--ECCCS-----SCEEEEEEETTT-TEEEEEETTS----CEEEEEECC-
T ss_pred EEEecC-----CEEEEEECcCCcceee--eccCC-----CeEEEEEEcCCC-CEEEEECCCC----eEEEEeCCCC
Confidence 444322 2578899877653322 21110 122233333333 4455676553 4666676544
No 139
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.51 E-value=1.6 Score=40.81 Aligned_cols=145 Identities=12% Similarity=0.081 Sum_probs=76.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++..++.|+.. ..+.+||..++.-..... . ......++.+ +++.++.|+.++ .+.+||+.+
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~---~--~~~~v~~~~~spdg~~lasg~~dg------~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLD---T--RGKFILSIAYSPDGKYLASGAIDG------IINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEE---C--SSSCEEEEEECTTSSEEEEEETTS------CEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEec---C--CCceEEEEEECCCCCEEEEEcCCC------eEEEEECCC
Confidence 45566666543 348888888776433221 0 1111222333 456677777653 589999988
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCe
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 255 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 255 (507)
.+-...-. +. ...-.+++...++.+++.|+.++ .+.+||+.+......- ......-..+.+ ++.
T Consensus 196 ~~~~~~~~-~h---~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 196 GKLLHTLE-GH---AMPIRSLTFSPDSQLLVTASDDG-----YIKIYDVQHANLAGTL-----SGHASWVLNVAFCPDDT 261 (321)
T ss_dssp TEEEEEEC-CC---SSCCCEEEECTTSCEEEEECTTS-----CEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSS
T ss_pred CcEEEEEc-cc---CCceeEEEEcCCCCEEEEEcCCC-----eEEEEECCCcceeEEE-----cCCCCceEEEEECCCCC
Confidence 76432211 11 11122334444555777777543 5888998876644321 111111122223 456
Q ss_pred EEEEeccCCCCCcceEEEEECCCCc
Q 010551 256 WYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
.++.|+.++ .+.++|+.+..
T Consensus 262 ~l~s~s~D~-----~v~iwd~~~~~ 281 (321)
T 3ow8_A 262 HFVSSSSDK-----SVKVWDVGTRT 281 (321)
T ss_dssp EEEEEETTS-----CEEEEETTTTE
T ss_pred EEEEEeCCC-----cEEEEeCCCCE
Confidence 777776543 37788887764
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.48 E-value=1.3 Score=41.52 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=34.1
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceee
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSN 67 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~ 67 (507)
|..++++|+.+.+....-. .+.....+.+++. ++.+|+.+.. ...+++||+.++.-..
T Consensus 20 ~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TTEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 4567899998887654432 1111122334433 3467777642 2469999998876543
No 141
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.47 E-value=3.1 Score=43.79 Aligned_cols=110 Identities=17% Similarity=0.107 Sum_probs=61.0
Q ss_pred CCCeEeeCCCC--ceEEeecCCCCCC-----ccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccc
Q 010551 3 SGSWHLELPYD--LWVTLPVSGARPS-----PRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETE 73 (507)
Q Consensus 3 ~~~~~~d~~~~--~W~~~~~~~~~p~-----~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~ 73 (507)
..++++|..+. .|+.-+....... .....+.++.++.||+... ...++.+|..+++ |+.......
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l~AlDa~TG~~~W~~~~~~~~ 153 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRLEAIDAKTGQRAWSVDTRADH 153 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCSCT
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEEEEEECCCCCEeeeecCcCCC
Confidence 35778887654 6876542110000 0112234556888888653 2469999998875 876432010
Q ss_pred cCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEe
Q 010551 74 LDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVM 132 (507)
Q Consensus 74 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 132 (507)
........+.++.++.+|+..+... ......++.||..|++ |+.-
T Consensus 154 -------------~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 154 -------------KRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp -------------TSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred -------------CCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEec
Confidence 0011222334556888877433211 1124569999999986 8765
No 142
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=95.42 E-value=0.17 Score=38.30 Aligned_cols=34 Identities=9% Similarity=0.230 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhc
Q 010551 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNS 424 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 424 (507)
+.-|+.+....++.+.....+..+|++++.....
T Consensus 26 i~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~ 59 (110)
T 2v4h_A 26 LEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKI 59 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555555555544443
No 143
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.39 E-value=2 Score=41.20 Aligned_cols=190 Identities=10% Similarity=0.006 Sum_probs=89.3
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCC-----------CCcCcEEEEECCEEEEEcCCCCCCCccC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV-----------TRGGHSVTLVGSRLIIFGGEDRSRKLLN 168 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~-----------~r~~~~~~~~~~~iy~~GG~~~~~~~~n 168 (507)
++..++.|+.+ ..+.+||+.++...........+. +....+++...+..++.|+.+ +
T Consensus 160 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g 227 (425)
T 1r5m_A 160 DGTHIISMDVE------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------G 227 (425)
T ss_dssp TSSEEEEEETT------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------G
T ss_pred CCCEEEEEecC------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------C
Confidence 45555555543 238899998887554332111110 000222333333445666654 3
Q ss_pred cEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccE
Q 010551 169 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHA 248 (507)
Q Consensus 169 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~ 248 (507)
.+.+||+.+..-...-. .....-.+++...++.+++.|+.+ ..+.+||+.+....... . .....-.+
T Consensus 228 ~i~~~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~--~--~~~~~i~~ 294 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLI----GHHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCF--Y--GHSQSIVS 294 (425)
T ss_dssp CEEEEETTCSSCSEEEC----CCSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEE--C--CCSSCEEE
T ss_pred eEEEEEcCCCceeeeec----cCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEe--c--CCCccEEE
Confidence 59999998764322111 111112233334444466666643 35888888765422211 0 01111223
Q ss_pred EEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEE
Q 010551 249 GITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVM 328 (507)
Q Consensus 249 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 328 (507)
++...+.+++.|+.++ .+.+||+.+..-....... ......+.+..+..++++|+.+ ..+.++
T Consensus 295 ~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~d----g~i~i~ 357 (425)
T 1r5m_A 295 ASWVGDDKVISCSMDG-----SVRLWSLKQNTLLALSIVD--------GVPIFAGRISQDGQKYAVAFMD----GQVNVY 357 (425)
T ss_dssp EEEETTTEEEEEETTS-----EEEEEETTTTEEEEEEECT--------TCCEEEEEECTTSSEEEEEETT----SCEEEE
T ss_pred EEECCCCEEEEEeCCC-----cEEEEECCCCcEeEecccC--------CccEEEEEEcCCCCEEEEEECC----CeEEEE
Confidence 3333333666665432 5888998776533321111 1112223333333455566644 357777
Q ss_pred ECC
Q 010551 329 RLK 331 (507)
Q Consensus 329 ~~~ 331 (507)
|+.
T Consensus 358 ~~~ 360 (425)
T 1r5m_A 358 DLK 360 (425)
T ss_dssp ECH
T ss_pred ECC
Confidence 764
No 144
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.36 E-value=0.43 Score=47.02 Aligned_cols=150 Identities=7% Similarity=0.089 Sum_probs=70.8
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 115 (507)
++.+++.|+.+ ..+.++|+.++....+..... ......++... ++.+++.|+.++
T Consensus 176 ~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~g~~dg---- 231 (435)
T 4e54_B 176 NTNQFYASSME-----GTTRLQDFKGNILRVFASSDT---------------INIWFCSLDVSASSRMVVTGDNVG---- 231 (435)
T ss_dssp CTTEEEEECSS-----SCEEEEETTSCEEEEEECCSS---------------CSCCCCCEEEETTTTEEEEECSSS----
T ss_pred CCCEEEEEeCC-----CEEEEeeccCCceeEEeccCC---------------CCccEEEEEECCCCCEEEEEeCCC----
Confidence 45566666644 358888988766554433221 11111222222 566777776432
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
.+.+||+.+..-. .+..-.....++.+ ++.+++.|+.+. .+.+||+.+..-...... .....
T Consensus 232 --~i~~wd~~~~~~~------~~~~h~~~v~~v~~~p~~~~~~~s~s~d~------~v~iwd~~~~~~~~~~~~-~~~h~ 296 (435)
T 4e54_B 232 --NVILLNMDGKELW------NLRMHKKKVTHVALNPCCDWFLATASVDQ------TVKIWDLRQVRGKASFLY-SLPHR 296 (435)
T ss_dssp --BEEEEESSSCBCC------CSBCCSSCEEEEEECTTCSSEEEEEETTS------BCCEEETTTCCSSSCCSB-CCBCS
T ss_pred --cEeeeccCcceeE------EEecccceEEeeeecCCCceEEEEecCcc------eeeEEecccccccceEEE-eeecc
Confidence 4888887654211 11111112233333 235677777653 467788765432111000 00000
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
..-.+++...++..++.|+.+ +.+.+||+.+..
T Consensus 297 ~~v~~~~~spdg~~l~s~~~D-----~~i~iwd~~~~~ 329 (435)
T 4e54_B 297 HPVNAACFSPDGARLLTTDQK-----SEIRVYSASQWD 329 (435)
T ss_dssp SCEEECCBCTTSSEEEEEESS-----SCEEEEESSSSS
T ss_pred ccccceeECCCCCeeEEEcCC-----CEEEEEECCCCc
Confidence 000111112344466666654 358888887654
No 145
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.36 E-value=1.8 Score=40.53 Aligned_cols=101 Identities=12% Similarity=0.056 Sum_probs=53.4
Q ss_pred cceEEEEECCCCcE-EEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCC--c-cCcEEEEECCCCcEEEeccCCCCCC
Q 010551 116 SMIVRFIDLETNLC-GVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRK--L-LNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 116 ~~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~--~-~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
...++++|+.++.. ..+.. + .....+...+.+++.+..+.... . ...++.+| +.++..+...
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~----~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----- 216 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK----P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----- 216 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE----E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-----
T ss_pred cceEEEEECCCCeEEeeecC----C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-----
Confidence 35799999999987 65542 2 22233333333555554332111 2 45788888 7777766431
Q ss_pred CCCCceEEEEcCCEEEEEcCCCC--CCCCCcEEEEECCCCcEEec
Q 010551 192 PRYDHSAALHANRYLIVFGGCSH--SIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~v~GG~~~--~~~~~~i~~~d~~~~~W~~~ 234 (507)
.......-+++.|++.+.... ......++.+| ++.+..+
T Consensus 217 --~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 217 --VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp --ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred --cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 112222334454544443221 12345799998 6666654
No 146
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.34 E-value=1.6 Score=42.50 Aligned_cols=147 Identities=11% Similarity=0.087 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|..++.....-... ......+.+ ++.+++.||.+.
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~h------------------~~~V~~v~~~~~~~~l~sgs~D~--- 172 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERTLKGH------------------TDSVQDISFDHSGKLLASCSADM--- 172 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEEECCC------------------SSCEEEEEECTTSSEEEEEETTS---
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEecc------------------CCcEEEEEEcCCCCEEEEEeCCC---
Confidence 34566677643 35889998876543221110 111122222 456777777543
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
.+.+||+.+..-... +........++.+ ++..++.|+.+ ..+.+||+.+..-...-. +. .
T Consensus 173 ---~i~iwd~~~~~~~~~-----~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~-~h---~ 234 (410)
T 1vyh_C 173 ---TIKLWDFQGFECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFT-GH---R 234 (410)
T ss_dssp ---CCCEEETTSSCEEEC-----CCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEE-CC---S
T ss_pred ---eEEEEeCCCCceeEE-----EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEe-CC---C
Confidence 266778877643221 1111122233333 44566677754 358899998776432211 11 1
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
.....+....++.+++.|+.+ +.+.+||+.+....
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKECK 269 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEE
T ss_pred ccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcee
Confidence 111122223345577777654 35788888776544
No 147
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.30 E-value=2.2 Score=41.13 Aligned_cols=106 Identities=9% Similarity=0.047 Sum_probs=57.6
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++.+++.|+.+. .+.+||+.++.-.... ........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQD------MQLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCC
Confidence 566777776532 3888998877544331 111122233333 45666677654 3589999876
Q ss_pred CcEE-EeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 178 MTWD-AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 178 ~~W~-~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
.+-. .+.. ....-.+++...++.+++.|+.++ .+.+||+.+++-.
T Consensus 171 ~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 171 GSNPRTLIG-----HRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTI 216 (420)
T ss_dssp CCCCEEEEC-----CSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEE
T ss_pred CcCceEEcC-----CCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCcee
Confidence 5422 1210 011122333344554666666543 5888998877544
No 148
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.29 E-value=1.3 Score=41.31 Aligned_cols=145 Identities=15% Similarity=0.107 Sum_probs=69.1
Q ss_pred EEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 102 ~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
.+++.||.+ ..+.+||..++....... ... ....++.+ ++.+++.|+.++ .+.+||+.+..
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~~~~~~~~---~h~--~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~ 248 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANCKLKTNHI---GHT--GYLNTVTVSPDGSLCASGGKDG------QAMLWDLNEGK 248 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTTEEEEEEC---CCS--SCEEEEEECTTSSEEEEEETTC------EEEEEETTTTE
T ss_pred cEEEEEcCC------CEEEEEECCCCceeeEec---CCC--CcEEEEEECCCCCEEEEEeCCC------eEEEEEeccCc
Confidence 355555543 238889998886544321 111 11223333 456777777653 58889988765
Q ss_pred EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCcc----EEEEE--C
Q 010551 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGH----AGITI--D 253 (507)
Q Consensus 180 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~----~~~~~--~ 253 (507)
-...-.. .....+++...++ .++.++.+ +.+.+||+.+..-...............| ..+.+ +
T Consensus 249 ~~~~~~~-----~~~v~~~~~~~~~-~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 249 HLYTLDG-----GDIINALCFSPNR-YWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp EEEEEEC-----SSCEEEEEECSSS-SEEEEEET-----TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred eeeeecC-----CceEEeeecCCCC-ceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 4332211 1111222223344 44555543 35888898876543211101111111111 12222 4
Q ss_pred CeEEEEeccCCCCCcceEEEEECCCC
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
+..++.||.++ .+.++|++++
T Consensus 318 g~~l~sgs~Dg-----~v~iW~~~tG 338 (340)
T 4aow_A 318 GQTLFAGYTDN-----LVRVWQVTIG 338 (340)
T ss_dssp SSEEEEEETTS-----CEEEEEEEC-
T ss_pred CCEEEEEeCCC-----EEEEEeCCCc
Confidence 56777777543 3667776654
No 149
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.26 E-value=1.4 Score=46.94 Aligned_cols=252 Identities=11% Similarity=0.027 Sum_probs=121.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCC---
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKK--- 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~--- 112 (507)
+++.++++...++.....++++|+.++......... .... +++-. ++.||+ +.....
T Consensus 173 DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~-----------------~~~~-~~~wspD~~l~~-~~~~~~~~~ 233 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW-----------------VKFS-GLAWLGNDALLY-SRFAEPKEG 233 (741)
T ss_dssp TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE-----------------EESC-CCEESTTSEEEE-EECCCC---
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC-----------------ceec-cEEEECCCEEEE-EEecCcccc
Confidence 555555554332332357999999999875542111 0101 11111 323333 332221
Q ss_pred -----CCCcceEEEEECCCCcEE-EeecCCCCCCCCcCcEEEEE--CC-EEEEEcCCCCCCCccCcEEEEECCCC--c-E
Q 010551 113 -----SSDSMIVRFIDLETNLCG-VMETSGKVPVTRGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETM--T-W 180 (507)
Q Consensus 113 -----~~~~~~~~~yd~~t~~W~-~~~~~g~~p~~r~~~~~~~~--~~-~iy~~GG~~~~~~~~n~~~~~d~~t~--~-W 180 (507)
......++.+++.++.-. .+... ....+.. ...+.+ ++ .|++......+ ..++++++|+.+. . |
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~-~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~--~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFA-TPELPKR-GHGASVSSDGRWVVITSSEGTD--PVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEEC-CTTCTTC-EEEEEECTTSCEEEEEEECTTC--SCCEEEEEEEETTEECCC
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEec-cCCCCeE-EEEEEECCCCCEEEEEEEccCC--CcceEEEEECCCCCCccc
Confidence 112446888888776521 11111 1111111 222223 44 45544432211 2578999999877 6 8
Q ss_pred EEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC--CcEEecccCCCCCCCCCccEEEEECCeEEE
Q 010551 181 DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 181 ~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
..+.... ......+..+++.||+....+ .....|+.+|+.+ ..|..+.. .... ....+...++.+++
T Consensus 310 ~~l~~~~-----~~~~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~--~~~~--~l~~~~~~~~~lv~ 378 (741)
T 1yr2_A 310 TALIPDL-----KAQWDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVP--ESKD--NLESVGIAGNRLFA 378 (741)
T ss_dssp EEEECSS-----SSCEEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEEC--CCSS--EEEEEEEEBTEEEE
T ss_pred EEecCCC-----CceEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEec--CCCC--eEEEEEEECCEEEE
Confidence 8875321 112222334567677765432 2235799999988 57887632 1111 11122334677776
Q ss_pred EeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCc-eEEEEEccCCCCcCceEEEEECCCCC
Q 010551 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE-HHLVAFGGYNGKYNNEVFVMRLKPRD 334 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~~~~~~ 334 (507)
....+ ....++++++....-..+. .+.. +........+.. ..++.+.+ ......+|.+|+.+..
T Consensus 379 ~~~~d---g~~~l~~~~~~g~~~~~l~-~~~~------~~v~~~~~s~d~~~l~~~~ss--~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 379 SYIHD---AKSQVLAFDLDGKPAGAVS-LPGI------GSASGLSGRPGDRHAYLSFSS--FTQPATVLALDPATAK 443 (741)
T ss_dssp EEEET---TEEEEEEEETTSCEEEECB-CSSS------CEEEEEECCBTCSCEEEEEEE--TTEEEEEEEEETTTTE
T ss_pred EEEEC---CEEEEEEEeCCCCceeecc-CCCC------eEEEEeecCCCCCEEEEEEcC--CCCCCEEEEEECCCCc
Confidence 65432 3456889997655444443 2111 111111111222 23333333 3346778888876543
No 150
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.24 E-value=0.21 Score=50.41 Aligned_cols=34 Identities=9% Similarity=0.267 Sum_probs=14.7
Q ss_pred HHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccch
Q 010551 394 IKEDKRVLELSLTEVRTENSRFREKIDEVNSTHS 427 (507)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 427 (507)
++.++.++++.+.+.++...++++.+++...+.+
T Consensus 365 l~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~e 398 (487)
T 3oja_A 365 LEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIE 398 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHhhchhh
Confidence 3334444444444444444444444444444333
No 151
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=95.23 E-value=0.25 Score=36.67 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=19.6
Q ss_pred hHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHH
Q 010551 415 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKML 461 (507)
Q Consensus 415 l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~ 461 (507)
++.++..++.++...+.++.....++..++.+....|.....+++++
T Consensus 10 lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~El 56 (97)
T 2eqb_B 10 LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEV 56 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444444443333333333333333
No 152
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=95.22 E-value=0.28 Score=37.40 Aligned_cols=17 Identities=29% Similarity=0.303 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHhHHHHH
Q 010551 466 TIENEVQILRQQKSAFE 482 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~ 482 (507)
+.+.++.-++++++.++
T Consensus 83 ~AE~evasLnRriqllE 99 (101)
T 3u59_A 83 DAEAEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44455555666555443
No 153
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.22 E-value=1 Score=42.11 Aligned_cols=195 Identities=11% Similarity=-0.012 Sum_probs=93.9
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
.++|+||+...+...+... ....-++++.- ++.+|+.+... ......+++||+.++....+.....
T Consensus 66 ~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~-------- 132 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQDIIEDLS-------- 132 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEEEECSSS--------
T ss_pred CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEEEEEEccCc--------
Confidence 4578888888887776421 11222333333 56787765322 1122469999998876653321110
Q ss_pred CCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEEEEc
Q 010551 82 SGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLIIFG 158 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy~~G 158 (507)
+..+. ..++.. ++.+|+.............++.||+.+++...+... .. ....++.. ++ .||+..
T Consensus 133 ------~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~---~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 133 ------TAYCI-DDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--IS---VANGIALSTDEKVLWVTE 200 (333)
T ss_dssp ------SCCCE-EEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ES---SEEEEEECTTSSEEEEEE
T ss_pred ------cCCcc-cceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CC---cccceEECCCCCEEEEEe
Confidence 11111 122222 567777543221112245699999988777665321 10 01122222 33 577654
Q ss_pred CCCCCCCccCcEEEEECCC--CcEEEeccC--CCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 159 GEDRSRKLLNDVHFLDLET--MTWDAVEVT--QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 159 G~~~~~~~~n~~~~~d~~t--~~W~~~~~~--~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
.. .+.+++||+.+ .....+... ...+....-..++.-.++.+|+.... .+.+.+||+.......
T Consensus 201 ~~------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~~~ 268 (333)
T 2dg1_A 201 TT------ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPIGQ 268 (333)
T ss_dssp GG------GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEEEE
T ss_pred CC------CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEEEE
Confidence 32 34689999854 233322100 00110011122333345557775422 1368899986444333
No 154
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.16 E-value=2.3 Score=41.77 Aligned_cols=111 Identities=12% Similarity=0.048 Sum_probs=55.8
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEE-eecCCCCCCCCcCcEE--EEEC---CEEEEEcCCCCCCCccCcEEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGV-METSGKVPVTRGGHSV--TLVG---SRLIIFGGEDRSRKLLNDVHFL 173 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~g~~p~~r~~~~~--~~~~---~~iy~~GG~~~~~~~~n~~~~~ 173 (507)
++..++.|+. ...++.++..+..... ... .+........+ ..-+ +.+++.|+.+ ..+.+|
T Consensus 160 ~~~~l~~~~~------~g~v~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vw 225 (450)
T 2vdu_B 160 DDTTVIIADK------FGDVYSIDINSIPEEKFTQE--PILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKIS 225 (450)
T ss_dssp TSSEEEEEET------TSEEEEEETTSCCCSSCCCC--CSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEE
T ss_pred CCCEEEEEeC------CCcEEEEecCCcccccccce--eeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEE
Confidence 4556666653 2348888887664321 000 01001111122 2235 6777778765 358899
Q ss_pred ECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 174 DLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 174 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
|+.+.........+. ......+.+.++.+++.|+.+ +.+.+||+.+++...
T Consensus 226 d~~~~~~~~~~~~~h----~~~v~~~~~sd~~~l~s~~~d-----~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 226 HYPQCFIVDKWLFGH----KHFVSSICCGKDYLLLSAGGD-----DKIFAWDWKTGKNLS 276 (450)
T ss_dssp EESCTTCEEEECCCC----SSCEEEEEECSTTEEEEEESS-----SEEEEEETTTCCEEE
T ss_pred ECCCCceeeeeecCC----CCceEEEEECCCCEEEEEeCC-----CeEEEEECCCCcEee
Confidence 988766443311111 111122222244466666643 368899998876443
No 155
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.15 E-value=1.9 Score=39.45 Aligned_cols=148 Identities=8% Similarity=0.051 Sum_probs=71.6
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
++..++.|+.++ .+..||.... -..+. .+......+++...++. ++.|+.+ ..+.+||+.+..
T Consensus 154 ~~~~l~~~~~d~------~i~i~d~~~~-~~~~~----~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~ 216 (313)
T 3odt_A 154 SENKFLTASADK------TIKLWQNDKV-IKTFS----GIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGD 216 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTEE-EEEEC----SSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCC
T ss_pred CCCEEEEEECCC------CEEEEecCce-EEEEe----ccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchh
Confidence 556666666543 4888883321 11221 11122223344445665 5566543 368999998765
Q ss_pred EEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceE
Q 010551 231 WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH 310 (507)
Q Consensus 231 W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (507)
-...-. + ....-.+++...+..++.|+.++ .+.+||+.+......-..+. . ....+....+..
T Consensus 217 ~~~~~~-~---~~~~i~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~-------~-~i~~~~~~~~~~ 279 (313)
T 3odt_A 217 VLRTYE-G---HESFVYCIKLLPNGDIVSCGEDR-----TVRIWSKENGSLKQVITLPA-------I-SIWSVDCMSNGD 279 (313)
T ss_dssp EEEEEE-C---CSSCEEEEEECTTSCEEEEETTS-----EEEEECTTTCCEEEEEECSS-------S-CEEEEEECTTSC
T ss_pred hhhhhh-c---CCceEEEEEEecCCCEEEEecCC-----EEEEEECCCCceeEEEeccC-------c-eEEEEEEccCCC
Confidence 433211 1 11111223333232355555332 58899988876443322211 1 122233333333
Q ss_pred EEEEccCCCCcCceEEEEECCCCCCCC
Q 010551 311 LVAFGGYNGKYNNEVFVMRLKPRDIPR 337 (507)
Q Consensus 311 l~v~GG~~~~~~~~~~~~~~~~~~w~~ 337 (507)
++ .|+.+ ..+.++++....+..
T Consensus 280 ~~-~~~~d----g~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 280 II-VGSSD----NLVRIFSQEKSRWAS 301 (313)
T ss_dssp EE-EEETT----SCEEEEESCGGGCCC
T ss_pred EE-EEeCC----CcEEEEeCCCCceee
Confidence 44 46654 468888887665543
No 156
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.11 E-value=2.5 Score=40.62 Aligned_cols=198 Identities=14% Similarity=0.114 Sum_probs=91.9
Q ss_pred CEEEEEeccCCCCCCcceEEEEECCCCcE-----EEeecCCCCCCCCcCcEEEEE--C-CEEEEEcCCCCCCCccCcEEE
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDLETNLC-----GVMETSGKVPVTRGGHSVTLV--G-SRLIIFGGEDRSRKLLNDVHF 172 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~~t~~W-----~~~~~~g~~p~~r~~~~~~~~--~-~~iy~~GG~~~~~~~~n~~~~ 172 (507)
+.+++.|+.+. .+.+||+.++.= ..... +..........++.+ + +.+++.|+.++ .+.+
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~v~i 192 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSN------FASI 192 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSS------CEEE
T ss_pred CCEEEEEcCCC------eEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCC------CEEE
Confidence 56777776432 388888887640 01110 011111111222333 2 46777777643 5999
Q ss_pred EECCCCcEEEeccCCCCCCC-CCCceEEEE-cC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCC-CCCCccE
Q 010551 173 LDLETMTWDAVEVTQTPPAP-RYDHSAALH-AN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV-TGRAGHA 248 (507)
Q Consensus 173 ~d~~t~~W~~~~~~~~~p~~-r~~~~~~~~-~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p-~~r~~~~ 248 (507)
||+.+.+-...-........ ......+.+ .+ ..+++.|+.++. ...+.+||+.+..-.. .... .......
T Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~~~----~~~~~~~~~~v~ 266 (416)
T 2pm9_A 193 WDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANTPL----QTLNQGHQKGIL 266 (416)
T ss_dssp EETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTSCS----BCCCSCCSSCEE
T ss_pred EECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCCCc----EEeecCccCcee
Confidence 99988765433221000000 122222233 33 246666665431 1257888887643111 0111 1111112
Q ss_pred EEEE---CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceE
Q 010551 249 GITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEV 325 (507)
Q Consensus 249 ~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 325 (507)
.+.+ ++.+++.|+.++ .+.+||+.+..-.. .+.... ....+....+.+..+++.|+.+ ..+
T Consensus 267 ~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~--~~~~~~-----~~v~~~~~s~~~~~~l~s~~~d----~~i 330 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLS--QFPARG-----NWCFKTKFAPEAPDLFACASFD----NKI 330 (416)
T ss_dssp EEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEE--EEECSS-----SCCCCEEECTTCTTEEEECCSS----SEE
T ss_pred EEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCccce--eecCCC-----CceEEEEECCCCCCEEEEEecC----CcE
Confidence 2222 456777776443 47888887764322 111110 1112222333332566777754 457
Q ss_pred EEEECCCC
Q 010551 326 FVMRLKPR 333 (507)
Q Consensus 326 ~~~~~~~~ 333 (507)
.++++...
T Consensus 331 ~iw~~~~~ 338 (416)
T 2pm9_A 331 EVQTLQNL 338 (416)
T ss_dssp EEEESCCC
T ss_pred EEEEccCC
Confidence 77787654
No 157
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=95.07 E-value=0.13 Score=41.75 Aligned_cols=65 Identities=14% Similarity=0.243 Sum_probs=30.6
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHH
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~ 486 (507)
.-+++++.+.++.++++..+++.....++...+.+.+.+++++. ++++++..+++++..++.+++
T Consensus 70 l~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~----------~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 70 YFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIK----------ELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444444444444444433333 344445555555555555554
No 158
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.03 E-value=2.6 Score=44.38 Aligned_cols=149 Identities=13% Similarity=0.049 Sum_probs=81.0
Q ss_pred cceEEEEECCCC--cEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCC---cEEEeccCCCCC
Q 010551 116 SMIVRFIDLETN--LCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPP 190 (507)
Q Consensus 116 ~~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~---~W~~~~~~~~~p 190 (507)
.+.+|++|+.+. .|..+.. +...........++.||+....+.. ...++.+|+.+. .|+.+.+...
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~----~~~~~~~~~~~~g~~l~~~t~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~-- 328 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQG----DLDADVSLVDNKGSTLYLLTNRDAP---NRRLVTVDAANPGPAHWRDLIPERQ-- 328 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEEC----SSSSCEEEEEEETTEEEEEECTTCT---TCEEEEEETTSCCGGGCEEEECCCS--
T ss_pred CcEEEEEECCCCCCceEEEeC----CCCceEEEEeccCCEEEEEECCCCC---CCEEEEEeCCCCCccccEEEecCCC--
Confidence 357999998776 6877752 1111112234457899988765432 346999998764 4887754221
Q ss_pred CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--C-CeEEEEeccCCCCC
Q 010551 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--D-ENWYIVGGGDNNNG 267 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~ 267 (507)
.. . .....+++|++..-.++ ...++++|+.......+. .|..... ..... + +.+++... +...
T Consensus 329 --~~-~-~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~----~p~~~~~-~~~~~~~d~~~l~~~~s--s~~t 394 (693)
T 3iuj_A 329 --QV-L-TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA----LPGLGSV-SGFNGKHDDPALYFGFE--NYAQ 394 (693)
T ss_dssp --SC-E-EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC----CSSSSEE-EECCCCTTCSCEEEEEE--CSSS
T ss_pred --CE-E-EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee----cCCCceE-EeeecCCCCCEEEEEec--CCCC
Confidence 11 1 33344565655433222 246889998866555442 2221111 11111 2 33443322 2223
Q ss_pred cceEEEEECCCCcEEEeccC
Q 010551 268 CQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 268 ~~~~~~~d~~~~~W~~v~~~ 287 (507)
-..++.||+.+...+.+...
T Consensus 395 P~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 395 PPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp CCEEEEECTTTCCEEEEECC
T ss_pred CCEEEEEECCCCeEEEEEeC
Confidence 35789999988887776543
No 159
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.00 E-value=2.7 Score=40.46 Aligned_cols=201 Identities=8% Similarity=-0.001 Sum_probs=94.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeec--CCCCCCCCcCcEEEEE--CC-EEEEEcCCCCCCCccCcEEEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMET--SGKVPVTRGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLD 174 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~g~~p~~r~~~~~~~~--~~-~iy~~GG~~~~~~~~n~~~~~d 174 (507)
++.+++.|+.+ ..+.+||..++....... ...+........++.+ ++ .+++.|+.++ .+.++|
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN------VILVWD 160 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS------CEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC------EEEEEE
Confidence 55677777643 248888888774311000 0000001111222333 22 4677777553 589999
Q ss_pred CCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-C
Q 010551 175 LETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-D 253 (507)
Q Consensus 175 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~ 253 (507)
+.+.+....-.. ......-.+++...++.+++.|+.+ ..+.+||+.++.-......+ ........++.. +
T Consensus 161 ~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 161 VGTGAAVLTLGP--DVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRP--HEGTRPVHAVFVSE 231 (402)
T ss_dssp TTTTEEEEEECT--TTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECS--SCSSSCCEEEECST
T ss_pred CCCCCccEEEec--CCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccC--CCCCcceEEEEcCC
Confidence 988765433210 0111112233333355466666644 36999999887654321001 111111222222 5
Q ss_pred CeEEEEeccCCCCCcceEEEEECCCCcE-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~~~W-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
+.+++.|.... .-..+.+||+.+..- ..+..+... ....+....+.+..|++.|+.+ ..+.+|++..
T Consensus 232 ~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~g~~d----g~i~i~d~~~ 299 (402)
T 2aq5_A 232 GKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTS------SGVLLPFFDPDTNIVYLCGKGD----SSIRYFEITS 299 (402)
T ss_dssp TEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCC------SSCEEEEEETTTTEEEEEETTC----SCEEEEEECS
T ss_pred CcEEEEeccCC--CCceEEEEcCccccCCceEEeccCC------CceeEEEEcCCCCEEEEEEcCC----CeEEEEEecC
Confidence 66666662111 123578899876431 011111111 1223334445556777777544 3466666654
Q ss_pred C
Q 010551 333 R 333 (507)
Q Consensus 333 ~ 333 (507)
.
T Consensus 300 ~ 300 (402)
T 2aq5_A 300 E 300 (402)
T ss_dssp S
T ss_pred C
Confidence 3
No 160
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.98 E-value=2.6 Score=40.17 Aligned_cols=186 Identities=9% Similarity=0.058 Sum_probs=95.9
Q ss_pred EEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCc-EEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGH-SVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 102 ~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~-~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
.+++.|+.+. .+.+||+.++....... ........ +++.. ++.+++.|+.+ ..+.++|+.+.
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFIQ---GMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEEC---CCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceeee---cCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC
Confidence 5777776532 38899999888766542 11111222 23333 33677777654 35889999887
Q ss_pred cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCe-
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN- 255 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~- 255 (507)
....+..... ......+++...++.+++.|+.+ ..+.+||+.......+.. .......+.+ ++.
T Consensus 152 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~------h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 152 VIQVFAKTDS--WDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKL------HKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEEECCCC--SSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEEC------SSSCEEEEEECSSCTT
T ss_pred ceEEEeccCC--CCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEecc------CCCcEEEEEECCCCCC
Confidence 6666643211 11122233344455567777654 368899985443333211 1111122223 233
Q ss_pred EEEEeccCCCCCcceEEEEECCC----CcEEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEccCCCCcCceEEEEEC
Q 010551 256 WYIVGGGDNNNGCQETIVLNMTK----LAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~~----~~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~ 330 (507)
+++.|+.++ .+.+||+.+ .......... . ....+.... +..+++.|+.+ ..+.++|+
T Consensus 219 ~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~--------~-~v~~~~~s~~~~~~l~~~~~d----~~i~iwd~ 280 (383)
T 3ei3_B 219 LMATSSVDA-----TVKLWDLRNIKDKNSYIAEMPHE--------K-PVNAAYFNPTDSTKLLTTDQR----NEIRVYSS 280 (383)
T ss_dssp EEEEEETTS-----EEEEEEGGGCCSTTCEEEEEECS--------S-CEEEEEECTTTSCEEEEEESS----SEEEEEET
T ss_pred EEEEEeCCC-----EEEEEeCCCCCcccceEEEecCC--------C-ceEEEEEcCCCCCEEEEEcCC----CcEEEEEC
Confidence 777776443 477888876 3332221111 1 122233333 33455566644 46777887
Q ss_pred CCC
Q 010551 331 KPR 333 (507)
Q Consensus 331 ~~~ 333 (507)
...
T Consensus 281 ~~~ 283 (383)
T 3ei3_B 281 YDW 283 (383)
T ss_dssp TBT
T ss_pred CCC
Confidence 544
No 161
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.94 E-value=0.36 Score=54.69 Aligned_cols=178 Identities=11% Similarity=0.046 Sum_probs=84.5
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
..+.+||+.+..-..... .........+..-++..++.|+.+ ..+.++|..++.........
T Consensus 983 g~i~i~d~~~~~~~~~~~---~h~~~v~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~---------- 1044 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGV---GHKKAVRHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFLQAHQ---------- 1044 (1249)
T ss_dssp SCCEEEETTTTSCEEECC---CCSSCCCCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECCBCCS----------
T ss_pred CCEEEEEcCCCceeeecc---cCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEEecCC----------
Confidence 445667776665443321 111112222222255566666643 35889999887765433211
Q ss_pred CCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCC
Q 010551 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDR 162 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~ 162 (507)
..-.+++...+..++.|+.+ ..+.+||..++.-..... .........+..-++..++.|+.++
T Consensus 1045 --------~~v~~~~~~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~---~~~~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A 1045 --------ETVKDFRLLQDSRLLSWSFD------GTVKVWNVITGRIERDFT---CHQGTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp --------SCEEEEEECSSSEEEEEESS------SEEEEEETTTTCCCEEEE---CCSSCCCCEEECSSSSSCEEECCSS
T ss_pred --------CcEEEEEEcCCCcEEEEECC------CcEEEEECCCCceeEEEc---ccCCcEEEEEECCCCCEEEEEcCCC
Confidence 11112222233334445432 348899998876433221 1111111112222456667777653
Q ss_pred CCCccCcEEEEECCCCcEEEeccCCCCCCCCCC-ceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 163 SRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD-HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 163 ~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
.+.+||+.+..- +. ........ .+++...++.+++.|+.++ .+.+||+.++..
T Consensus 1108 ------~v~iwd~~~~~~--~~---~l~~h~~~v~~~~~s~dg~~lat~~~dg-----~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1108 ------TAKIWSFDLLSP--LH---ELKGHNGCVRCSAFSLDGILLATGDDNG-----EIRIWNVSDGQL 1161 (1249)
T ss_dssp ------CCCEECSSSSSC--SB---CCCCCSSCEEEEEECSSSSEEEEEETTS-----CCCEEESSSSCC
T ss_pred ------cEEEEECCCcce--ee---eeccCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCce
Confidence 467778765541 11 11111111 1223334555777777543 477888877653
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.94 E-value=2.5 Score=39.66 Aligned_cols=235 Identities=13% Similarity=0.028 Sum_probs=117.9
Q ss_pred CceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCC--cE
Q 010551 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETN--LC 129 (507)
Q Consensus 53 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~--~W 129 (507)
+.++++|+.+++........ .. ..-++++.. +++||+.... ...+.+||+... .-
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~---------------~~-~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~ 126 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN---------------LF-YLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPL 126 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT---------------TC-SSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCS
T ss_pred CcEEEEECCCCeEEeccCCC---------------cc-CCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEE
Confidence 46999999887764322111 00 111223322 5678887542 345999998765 22
Q ss_pred EEeecC---CCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCC----CCCCC-CceE
Q 010551 130 GVMETS---GKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP----PAPRY-DHSA 198 (507)
Q Consensus 130 ~~~~~~---g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~----p~~r~-~~~~ 198 (507)
..+... |..+........+.+ ++.||+..++. .+.+.+||+....-..+...+.. +.... -+.+
T Consensus 127 ~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gi 201 (329)
T 3fvz_A 127 LILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSL 201 (329)
T ss_dssp EEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEE
T ss_pred EEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEE
Confidence 233211 111111222233333 46899987632 24689999654443444322211 11111 2234
Q ss_pred EEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCC--CCCcceEEEEE
Q 010551 199 ALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN--NNGCQETIVLN 275 (507)
Q Consensus 199 ~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~--~~~~~~~~~~d 275 (507)
++-.+ +.|||....+ +.|.+||+.+++....-. .........+++...+.+++..|... +.....+.++|
T Consensus 202 a~d~~~g~l~v~d~~~-----~~I~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~ 274 (329)
T 3fvz_A 202 ALVPHLDQLCVADREN-----GRIQCFKTDTKEFVREIK--HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMN 274 (329)
T ss_dssp EEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEC--CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEE
T ss_pred EEECCCCEEEEEECCC-----CEEEEEECCCCcEEEEEe--ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEE
Confidence 44444 7788876432 469999998777654311 11111122233334466666666322 22234688999
Q ss_pred CCCCcEEEecc-CCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 276 MTKLAWSILTS-VKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 276 ~~~~~W~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+.+......-. .+. .... ...+.++.+..|||.... .+.+++|++.
T Consensus 275 ~~~g~~~~~~~~~~~-----~~~~-p~~ia~~~dG~lyvad~~----~~~I~~~~~~ 321 (329)
T 3fvz_A 275 FSSGEIIDVFKPVRK-----HFDM-PHDIVASEDGTVYIGDAH----TNTVWKFTLT 321 (329)
T ss_dssp TTTCCEEEEECCSSS-----CCSS-EEEEEECTTSEEEEEESS----SCCEEEEEEE
T ss_pred cCCCeEEEEEcCCCC-----ccCC-eeEEEECCCCCEEEEECC----CCEEEEEeCC
Confidence 88876554311 111 1111 223344444477876543 3577888764
No 163
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.92 E-value=1.6 Score=45.99 Aligned_cols=250 Identities=13% Similarity=0.023 Sum_probs=124.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECC-EEEEEeccCCC---
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGT-KLLILGGHYKK--- 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~-~lyv~GG~~~~--- 112 (507)
+++.++++-...+.....++++|+.++......... .+....+.. ++ .||+.......
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-----------------~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD-----------------VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE-----------------EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC-----------------ceeccEEEe-CCCEEEEEEecCccccc
Confidence 555555543222333457999999999875543211 112223334 54 45544332210
Q ss_pred ---CCCcceEEEEECCCCcEE--EeecCCCCCC--CCcCcEEEE-ECC-EEEEEcCCCCCCCccCcEEEEECCCC--cEE
Q 010551 113 ---SSDSMIVRFIDLETNLCG--VMETSGKVPV--TRGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLETM--TWD 181 (507)
Q Consensus 113 ---~~~~~~~~~yd~~t~~W~--~~~~~g~~p~--~r~~~~~~~-~~~-~iy~~GG~~~~~~~~n~~~~~d~~t~--~W~ 181 (507)
......++.+++.+..=. .+. ..+. +....++.. -++ .|++....+. ..++++.+|+.+. .|.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAANST---SGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEESSS---SCCEEEEEETTSTTCCCE
T ss_pred ccccCCCcEEEEEECCCCcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEccCC---CCcEEEEEECCCCCCceE
Confidence 022456888888776431 221 1111 111112222 234 4544433222 2368999998766 688
Q ss_pred EeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC---cEEecccCCCCCCCCCccEEEEECCeEEE
Q 010551 182 AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 182 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
.+... ...........++.+|+....+. ....|+.+|+.+. .|+.+.. .... .. +....++.|++
T Consensus 275 ~l~~~-----~~~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~--~~~~--~~-~~s~~g~~lv~ 342 (693)
T 3iuj_A 275 TVQGD-----LDADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIP--ERQQ--VL-TVHSGSGYLFA 342 (693)
T ss_dssp EEECS-----SSSCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEEC--CCSS--CE-EEEEETTEEEE
T ss_pred EEeCC-----CCceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEec--CCCC--EE-EEEEECCEEEE
Confidence 77531 11222224455777888766432 2457999998774 3776532 1111 11 44445666665
Q ss_pred EeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEE--cCceEEEEEccCCCCcCceEEEEECCCCCC
Q 010551 259 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII--EGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 335 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~~~~~~w 335 (507)
..-. .....++++|+.......+. ++.. +. ...+.. +++..++.+.++ .....+|.+|+.....
T Consensus 343 ~~~~---~g~~~l~~~d~~g~~~~~l~-~p~~------~~-~~~~~~~~d~~~l~~~~ss~--~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 343 EYMV---DATARVEQFDYEGKRVREVA-LPGL------GS-VSGFNGKHDDPALYFGFENY--AQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEE---TTEEEEEEECTTSCEEEEEC-CSSS------SE-EEECCCCTTCSCEEEEEECS--SSCCEEEEECTTTCCE
T ss_pred EEEE---CCeeEEEEEECCCCeeEEee-cCCC------ce-EEeeecCCCCCEEEEEecCC--CCCCEEEEEECCCCeE
Confidence 5322 23457889998876655553 2211 11 111111 222333444433 3456788888865543
No 164
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.91 E-value=0.33 Score=46.52 Aligned_cols=106 Identities=12% Similarity=0.133 Sum_probs=53.9
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEE--cCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
++..++.|+.+. .+.++|+.+.+-...-. ........+.+ .++.+++.||.++ .+.+||+.+
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~~~ 213 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDTRK 213 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCTTS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCC-----ceEEEECCC
Confidence 456667777653 48899998876443321 01111122222 2333666666542 477888876
Q ss_pred CcEEecccCCCCCCCCCccEEEEE---CCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 229 NEWSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 229 ~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
.+-.... ...........+.+ ++.+++.|+.++ .+.+||+.+..
T Consensus 214 ~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~ 260 (357)
T 4g56_B 214 PKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPD 260 (357)
T ss_dssp SSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGG
T ss_pred Cceeeee---eeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCc
Confidence 5432210 11111111222333 346777776443 37788887654
No 165
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.89 E-value=0.58 Score=43.35 Aligned_cols=187 Identities=7% Similarity=-0.087 Sum_probs=89.8
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.++.||+....-..+.. +. + -.+++.. ++.||+.. .+.+++||+.++.++.+.....
T Consensus 36 ~i~~~d~~~~~~~~~~~----~~-~-~~~i~~~~dG~l~v~~-------~~~l~~~d~~~g~~~~~~~~~~--------- 93 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTM----DA-P-VSSVALRQSGGYVATI-------GTKFCALNWKEQSAVVLATVDN--------- 93 (297)
T ss_dssp EEEEEETTTCCEEEEEC----SS-C-EEEEEEBTTSSEEEEE-------TTEEEEEETTTTEEEEEEECCT---------
T ss_pred EEEEEECCCCcEEEEeC----CC-c-eEEEEECCCCCEEEEE-------CCeEEEEECCCCcEEEEEecCC---------
Confidence 45677777766555442 11 1 1222222 55566543 2469999999998877654321
Q ss_pred CCcCCCCCccceeEEEECCEEEEEeccCCC------CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEE
Q 010551 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKK------SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRL 154 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~------~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~i 154 (507)
..+..+....++.-++++|+.. .... ......++.+++. +....+......| ..++.. +..+
T Consensus 94 ---~~~~~~~~di~~d~dG~l~~~~-~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~p-----ngi~~spdg~~l 163 (297)
T 3g4e_A 94 ---DKKNNRFNDGKVDPAGRYFAGT-MAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDIS-----NGLDWSLDHKIF 163 (297)
T ss_dssp ---TCSSEEEEEEEECTTSCEEEEE-EECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBE-----EEEEECTTSCEE
T ss_pred ---CCCCCCCCCEEECCCCCEEEec-CCcccccccccCCCcEEEEEECC-CCEEEEeeccccc-----cceEEcCCCCEE
Confidence 1111222222222256776632 2111 1124568889875 3443332110111 122222 3367
Q ss_pred EEEcCCCCCCCccCcEEEEEC--CCCcEEEeccCCCCCC-CCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 155 IIFGGEDRSRKLLNDVHFLDL--ETMTWDAVEVTQTPPA-PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 155 y~~GG~~~~~~~~n~~~~~d~--~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
|+.... .+.+++||. .++...........+. ...-.+++.-.++.||+....+ +.|++||+.+++.
T Consensus 164 yv~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 164 YYIDSL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKR 232 (297)
T ss_dssp EEEEGG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCE
T ss_pred EEecCC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceE
Confidence 776543 346888876 4554432111000110 1111234444456688754221 3599999987765
Q ss_pred Ee
Q 010551 232 SQ 233 (507)
Q Consensus 232 ~~ 233 (507)
..
T Consensus 233 ~~ 234 (297)
T 3g4e_A 233 LQ 234 (297)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 166
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=94.87 E-value=0.38 Score=36.68 Aligned_cols=11 Identities=27% Similarity=0.329 Sum_probs=4.6
Q ss_pred HHHHHHHHHHH
Q 010551 391 IDAIKEDKRVL 401 (507)
Q Consensus 391 ~~~l~~~~~~~ 401 (507)
+..|+.++...
T Consensus 11 m~~lk~e~e~a 21 (101)
T 3u59_A 11 MQMLKLDKENA 21 (101)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 167
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.87 E-value=4.5 Score=42.35 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=59.9
Q ss_pred CCeEeeCCCC--ceEEeecCCCCCC-----ccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeecccccc
Q 010551 4 GSWHLELPYD--LWVTLPVSGARPS-----PRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETEL 74 (507)
Q Consensus 4 ~~~~~d~~~~--~W~~~~~~~~~p~-----~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~ 74 (507)
.++++|..+. .|+.-+....... .....+.++.++.||+... ...++.+|..+++ |+.......
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~~- 149 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRLIALDAKTGKAIWSQQTTDPA- 149 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEEEEEETTTCCEEEEEECSCTT-
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEEEEEECCCCCEeeeeccCCCC-
Confidence 3677787654 6876542110000 0112334556888887653 2469999998875 876432110
Q ss_pred CCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEee
Q 010551 75 DADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVME 133 (507)
Q Consensus 75 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 133 (507)
.......+.++.++.||+..+... ......++.||..|++ |+.-.
T Consensus 150 -------------~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 150 -------------KPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp -------------SSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred -------------CcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEecc
Confidence 011222334556888877433211 1124569999999886 87643
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.83 E-value=2.6 Score=39.32 Aligned_cols=206 Identities=10% Similarity=0.015 Sum_probs=102.1
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 115 (507)
++.||+.+... ..+++||+.++....+.... ...-++++.. ++++|+.+..... .
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-----------------~~~~~~i~~~~dg~l~v~~~~~~~--~ 110 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-----------------KANPAAIKIHKDGRLFVCYLGDFK--S 110 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-----------------SSSEEEEEECTTSCEEEEECTTSS--S
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-----------------CCCcceEEECCCCcEEEEeCCCCC--C
Confidence 56788876532 46999999988876654211 1111233332 5677776532211 1
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r 193 (507)
...+++||+.++....+... .+.. .....+.+ ++.+|+....+........+++||+.+.+...+... . .
T Consensus 111 ~~~i~~~d~~~~~~~~~~~~--~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~---~ 182 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIED--LSTA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--I---S 182 (333)
T ss_dssp CCEEEEECTTSCSCEEEECS--SSSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--E---S
T ss_pred CceEEEEeCCCCEEEEEEcc--CccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--C---C
Confidence 24699999998876644321 1111 11222333 457777543221111245699999887776655321 0 1
Q ss_pred CCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCC--CcEEeccc--CCCCCCCCCccEEEEE-CCeEEEEeccCCCCC
Q 010551 194 YDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEI--KGDLVTGRAGHAGITI-DENWYIVGGGDNNNG 267 (507)
Q Consensus 194 ~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~--~~W~~~~~--~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~ 267 (507)
...+++...+ +.+|+.... .+.+++||+.+ .....+.. ....+.......++.- ++++|+....+
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~-----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~---- 253 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETT-----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ---- 253 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGG-----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT----
T ss_pred cccceEECCCCCEEEEEeCC-----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC----
Confidence 1122333334 457775432 24689999854 22322110 0001111111122332 45777764321
Q ss_pred cceEEEEECCCCcEEEe
Q 010551 268 CQETIVLNMTKLAWSIL 284 (507)
Q Consensus 268 ~~~~~~~d~~~~~W~~v 284 (507)
..+.+||+.......+
T Consensus 254 -~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 254 -GRVLVFNKRGYPIGQI 269 (333)
T ss_dssp -TEEEEECTTSCEEEEE
T ss_pred -CEEEEECCCCCEEEEE
Confidence 3588899865544444
No 169
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.82 E-value=2.6 Score=39.42 Aligned_cols=157 Identities=13% Similarity=0.091 Sum_probs=73.4
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCC--CcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEEC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLET--NLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~ 175 (507)
++..++.|+.+. .+.+||+.. ..+..+.. +........++.+ ++.+++.|+.+. .+.++|.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISV---LQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEE---ECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEE---eccCCCceEEEEECCCCCEEEEEcCCC------eEEEEEC
Confidence 456666666432 378888743 23443331 1111112223333 456677777653 4778887
Q ss_pred CCCcEEEeccCCCCCCCCCCceEEEEcC--CEEEEEcCCCCCCCCCcEEEEECCCC------cEEecccCCCCCCCCCcc
Q 010551 176 ETMTWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTN------EWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 176 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~--~~l~v~GG~~~~~~~~~i~~~d~~~~------~W~~~~~~~~~p~~r~~~ 247 (507)
.+..|..+...... ...-.++....+ ...++.|+.++ .+.++|+... .|..+.... ......-.
T Consensus 183 ~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~-~~h~~~v~ 254 (330)
T 2hes_X 183 YDDDWECVAVLNGH--EGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILP-DVHKRQVY 254 (330)
T ss_dssp ETTEEEEEEEECCC--SSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECC-SCCSSCEE
T ss_pred CCCCeeEEEEccCC--CCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecc-cccccceE
Confidence 77777655432110 001111222222 33555666442 3556665332 344332111 00111222
Q ss_pred EEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEe
Q 010551 248 AGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 248 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v 284 (507)
+++...+.+++.||.++ .+.+||..+..|..+
T Consensus 255 ~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 255 NVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVF 286 (330)
T ss_dssp EEEECTTSCEEEEETTS-----CEEEEEEETTEEEEE
T ss_pred EEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEE
Confidence 33333445666666443 367788878777654
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.79 E-value=0.62 Score=44.67 Aligned_cols=200 Identities=7% Similarity=-0.014 Sum_probs=96.3
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCE-EEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQK-LYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 80 (507)
..+|.+|+...+...+... .....+....- ++. |++............++.+|+.+..+..+....
T Consensus 168 ~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-------- 235 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA-------- 235 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC--------
T ss_pred ceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC--------
Confidence 3578899988887777621 11122222222 243 444432111112357999999887766554310
Q ss_pred cCCCcCCCCCccceeEEEE--CCE-EEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEE
Q 010551 81 DSGLLEVLPPMSDHCMVKW--GTK-LLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLII 156 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~ 156 (507)
+........+ +++ |++.+ ..... ....++++|+.++....+.. .+. .. .+..- ++++++
T Consensus 236 ---------~~~~~~~~~~spdg~~l~~~~-~~~~~-~~~~l~~~d~~~g~~~~l~~---~~~--~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 236 ---------EGESCTHEFWIPDGSAMAYVS-YFKGQ-TDRVIYKANPETLENEEVMV---MPP--CS-HLMSNFDGSLMV 298 (396)
T ss_dssp ---------TTEEEEEEEECTTSSCEEEEE-EETTT-CCEEEEEECTTTCCEEEEEE---CCS--EE-EEEECSSSSEEE
T ss_pred ---------CCccccceEECCCCCEEEEEe-cCCCC-ccceEEEEECCCCCeEEeee---CCC--CC-CCccCCCCceEE
Confidence 0111112222 344 44443 22211 12459999999998776652 221 11 22223 566666
Q ss_pred EcCCCCC----------CCccCcEEEEECCCCcEEEeccCCCCC------CCCCCceEEEE-cCCEEEEEcCCCCCCCCC
Q 010551 157 FGGEDRS----------RKLLNDVHFLDLETMTWDAVEVTQTPP------APRYDHSAALH-ANRYLIVFGGCSHSIFFN 219 (507)
Q Consensus 157 ~GG~~~~----------~~~~n~~~~~d~~t~~W~~~~~~~~~p------~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~ 219 (507)
+++.+.. ......++.+|+.+.....+....... ........+.. +++.|++.....+ ..
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~---~~ 375 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG---VP 375 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SC
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC---Cc
Confidence 5443210 012357999999888776664321100 00001112222 3444544433222 24
Q ss_pred cEEEEECCCCcEEec
Q 010551 220 DLHVLDLQTNEWSQP 234 (507)
Q Consensus 220 ~i~~~d~~~~~W~~~ 234 (507)
.+|.+|+.+..++.+
T Consensus 376 ~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 376 AIYIADVPESYKHLE 390 (396)
T ss_dssp EEEEEECCTTCC---
T ss_pred eEEEEEEcccccccc
Confidence 699999888776653
No 171
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.77 E-value=3.1 Score=40.06 Aligned_cols=105 Identities=13% Similarity=0.046 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCE-EEEEcCCCCCCCCCcEEEEECCCC
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRY-LIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++.+++.|+.++ .+.+||+.+..-...... .......+++...++. +++.|+.+ ..+.+||+.+.
T Consensus 258 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~ 323 (420)
T 3vl1_A 258 YGKYVIAGHVSG------VITVHNVFSKEQTIQLPS---KFTCSCNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSP 323 (420)
T ss_dssp TTEEEEEEETTS------CEEEEETTTCCEEEEECC---TTSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCceeEEccc---ccCCCceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCC
Confidence 456677776543 489999987763332211 1111122233333443 66666654 36889998875
Q ss_pred cE--EecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCC
Q 010551 230 EW--SQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 230 ~W--~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
.- ..+.. . ....-.++...++.+++.|+.++ .+.++|+..
T Consensus 324 ~~~~~~~~~--~--~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 324 ECPVGEFLI--N--EGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp TSCSEEEEE--S--TTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred cCchhhhhc--c--CCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 32 22211 0 11111233334677777776443 366666554
No 172
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.77 E-value=3.6 Score=40.72 Aligned_cols=188 Identities=16% Similarity=0.187 Sum_probs=97.2
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
++++|+|-|. ..|.||..+++.....-.| +| . --++....+++|+|-|. ..++||..+.+
T Consensus 158 ~~~~yfFkG~--------~yw~yd~~~~~~~~~~w~g-i~--~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~~ 217 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDLTTGTKKERSWPA-VG--N-CTSALRWLGRYYCFQGN--------QFLRFNPVSGE 217 (460)
T ss_dssp SSEEEEEETT--------EEEEEETTTTEEEEECCTT-SC--C-CSEEEEETTEEEEEETT--------EEEEECTTTCC
T ss_pred CCeEEEEecc--------cEEEEecccceeecccCCC-CC--c-cchheeeCCceEEEECC--------EEEEEcCccCc
Confidence 6788999873 3899999988765432222 22 2 23555567899999884 36777765432
Q ss_pred ------------EEEeccCCC---------------CCCCC-CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 180 ------------WDAVEVTQT---------------PPAPR-YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 180 ------------W~~~~~~~~---------------~p~~r-~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
|..+...|. .+.+. ..-+++...++.+|+|-|. ..|++|.....+
T Consensus 218 v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~-------~yWR~~~~~~~~ 290 (460)
T 1qhu_A 218 VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS-------HYWRLDTNRDGW 290 (460)
T ss_dssp CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT-------EEEECTTGGGCC
T ss_pred ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC-------EEEEEecCCCCc
Confidence 222111110 01111 2223333246678988773 466666543322
Q ss_pred Eeccc---CCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCC------CCCC--CCCCce
Q 010551 232 SQPEI---KGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGR------NPLA--SEGLSV 300 (507)
Q Consensus 232 ~~~~~---~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~------~~~~--~~~~~~ 300 (507)
..... -+.+|. .--++...++.+|+|=| +.+|+|+..+. .+.++..|.. .|.. ..+..
T Consensus 291 ~p~~Is~~WpglP~--~IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~ID- 359 (460)
T 1qhu_A 291 HSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVD- 359 (460)
T ss_dssp CCEEGGGTCTTSCS--SCSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCC-
T ss_pred CccchhhhccCCCC--CCcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCccc-
Confidence 11111 122333 23455556789999965 35788886532 2222211111 0111 11122
Q ss_pred EEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 301 CSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 301 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+++....+..+|+|-| +..|.||..
T Consensus 360 AA~~~~~~~ktyfFkG------~~ywryd~~ 384 (460)
T 1qhu_A 360 AAFVCPGSSRLHIMAG------RRLWWLDLK 384 (460)
T ss_dssp EEECCTTCCEEEEEET------TEEEEEEGG
T ss_pred EEEEeCCCCEEEEEEC------CEEEEEECC
Confidence 2223334567888876 568899976
No 173
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.75 E-value=2.8 Score=41.21 Aligned_cols=159 Identities=9% Similarity=-0.006 Sum_probs=78.4
Q ss_pred CEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
+.+++.|+.+ ..+.+||+.++........+. . ....++.+ ++.+++.|+.+ +.+.+||+.+++
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h--~--~~v~~~~~sd~~~l~s~~~d------~~v~vwd~~~~~ 273 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGH--K--HFVSSICCGKDYLLLSAGGD------DKIFAWDWKTGK 273 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCC--S--SCEEEEEECSTTEEEEEESS------SEEEEEETTTCC
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCC--C--CceEEEEECCCCEEEEEeCC------CeEEEEECCCCc
Confidence 6677777653 248888988776443321111 1 11122222 66667777754 368999998876
Q ss_pred EEEeccCCC----------C-----------CCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEEC--CC-CcEEecc
Q 010551 180 WDAVEVTQT----------P-----------PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL--QT-NEWSQPE 235 (507)
Q Consensus 180 W~~~~~~~~----------~-----------p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~--~~-~~W~~~~ 235 (507)
....-..+. . +.......++...++.++++++... +.+.+|++ .+ ..+..+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d----~~i~iw~~~~~~~~~l~~~~ 349 (450)
T 2vdu_B 274 NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT----KCIIILEMSEKQKGDLALKQ 349 (450)
T ss_dssp EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC----SEEEEEEECSSSTTCEEEEE
T ss_pred EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC----CeEEEEEeccCCCCceeecc
Confidence 433221100 0 0011111222233333444443211 46888888 33 3444432
Q ss_pred cCCCCCCCCCccEEEEECCeEEEEeccCCC----CCcceEEEEECCCCcEE
Q 010551 236 IKGDLVTGRAGHAGITIDENWYIVGGGDNN----NGCQETIVLNMTKLAWS 282 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~----~~~~~~~~~d~~~~~W~ 282 (507)
.. +.+....+++...+.+++..+.... ...-.+|.++..++.|.
T Consensus 350 ~~---~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 350 II---TFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EE---ECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred Ee---ccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 21 1112223444556677776654321 22346788888888775
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.75 E-value=1.7 Score=39.03 Aligned_cols=213 Identities=12% Similarity=0.006 Sum_probs=99.8
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
.+++||+.......++. ......+++++. ++.||+... ...+++||+.......+....
T Consensus 47 ~i~~~~~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~---------- 106 (270)
T 1rwi_B 47 RVVKLATGSTGTTVLPF----NGLYQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFDG---------- 106 (270)
T ss_dssp EEEEECC-----EECCC----CSCCSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCCS----------
T ss_pred cEEEecCCCcccceEee----CCcCCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecCC----------
Confidence 34555655544443331 111223344443 467888764 236889998876544332111
Q ss_pred CCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCC
Q 010551 83 GLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGE 160 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~ 160 (507)
...-++++.. +++||+.... ...+++|+..+......... ... .-..++.- ++++|+....
T Consensus 107 -------~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~-~~~---~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 107 -------LNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFT-GLN---DPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp -------CSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCC-SCC---SCCCEEECTTCCEEEEEGG
T ss_pred -------cCCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccc-cCC---CceeEEEeCCCCEEEEECC
Confidence 0111233333 5678886532 23588887766654432211 111 11222222 4577776442
Q ss_pred CCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCC
Q 010551 161 DRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 240 (507)
Q Consensus 161 ~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 240 (507)
.+.+.+||+.+..-...... .. ..-.+++...++.+|+....+ +.+++||+....-.....
T Consensus 170 ------~~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~~~~~~---- 230 (270)
T 1rwi_B 170 ------NNRVVKLEAESNNQVVLPFT-DI---TAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTSTVLPF---- 230 (270)
T ss_dssp ------GTEEEEECTTTCCEEECCCS-SC---CSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCCEECCC----
T ss_pred ------CCEEEEEecCCCceEeeccc-CC---CCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcceeecc----
Confidence 24689999887654433211 11 112233333455688765422 468899987654332210
Q ss_pred CCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECC
Q 010551 241 VTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 241 p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~ 277 (507)
.......+++.- ++++|+....+ +.+.+|++.
T Consensus 231 ~~~~~p~~i~~~~~g~l~v~~~~~-----~~v~~~~~~ 263 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDRTVYVADRGN-----DRVVKLTSL 263 (270)
T ss_dssp CSCSCEEEEEECTTCCEEEEEGGG-----TEEEEECCC
T ss_pred CCCCCceeEEECCCCCEEEEECCC-----CEEEEEcCC
Confidence 001112233332 35777775432 246666644
No 175
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.72 E-value=5.3 Score=42.44 Aligned_cols=198 Identities=6% Similarity=0.028 Sum_probs=99.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 115 (507)
++.|+|-. . ..+++||+.++++......... ...+...-++++.- ++.|++ |....
T Consensus 383 ~g~lWigt--~-----~GL~~~~~~~~~~~~~~~~~~~-----------~~~~~~~v~~i~~d~~g~lWi-gT~~~---- 439 (758)
T 3ott_A 383 EQQLWIAT--D-----GSINRYDYATRQFIHYNIVDNT-----------GTYNTNWTYYIFEDTAGQLWI-STCLG---- 439 (758)
T ss_dssp TSCEEEEE--T-----TEEEEEETTTTEEEEEEEECCC-------------CBSSSEEEEEECTTSEEEE-EESSS----
T ss_pred CCCEEEEe--C-----CcHhhcCcCCCcEEEeecCCCc-----------CCCCCceEEEEEEcCCCCEEE-EECCC----
Confidence 45676632 1 3589999999988876532210 00111112233332 466766 32211
Q ss_pred cceEEEEECCC------CcEE---EeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEec
Q 010551 116 SMIVRFIDLET------NLCG---VMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 116 ~~~~~~yd~~t------~~W~---~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~ 184 (507)
-+++||+.+ ..+. .......++.. ...+... ++.|+++||.. +-+++||+.+.++..+.
T Consensus 440 --Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~ 509 (758)
T 3ott_A 440 --GIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM--FINQIIPDNEGNVWVLLYNN------KGIDKINPRTREVTKLF 509 (758)
T ss_dssp --CEEEEEHHHHHHCCSSEEECSEEECGGGTCSCS--CEEEEEECTTSCEEEEETTC------SSEEEEETTTTEEEEEC
T ss_pred --ceEEEccccccccCCcceecccccccccccccc--eeeeEEEcCCCCEEEEccCC------CCcEEEeCCCCceEEec
Confidence 277887653 2232 11111112211 1122222 45788866653 24999999999998874
Q ss_pred cCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCC
Q 010551 185 VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN 264 (507)
Q Consensus 185 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 264 (507)
.. ..+......+++.-.++.|++ |.. +-+.+||+.++.+..... ..+|. ...++++.-++.|++...
T Consensus 510 ~~-~~~~~~~~~~i~~d~~g~lWi-gt~------~Gl~~~~~~~~~~~~~~~-~gl~~-~~i~~i~~~~g~lWi~t~--- 576 (758)
T 3ott_A 510 AD-ELTGEKSPNYLLCDEDGLLWV-GFH------GGVMRINPKDESQQSISF-GSFSN-NEILSMTCVKNSIWVSTT--- 576 (758)
T ss_dssp TT-TSCGGGCEEEEEECTTSCEEE-EET------TEEEEECC--CCCCBCCC-CC----CCEEEEEEETTEEEEEES---
T ss_pred CC-CcCCCcccceEEECCCCCEEE-Eec------CceEEEecCCCceEEecc-cCCCc-cceEEEEECCCCEEEECC---
Confidence 32 111111112233333565775 332 248999998887765431 22332 223334444667777532
Q ss_pred CCCcceEEEEECCCCcEEEe
Q 010551 265 NNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 265 ~~~~~~~~~~d~~~~~W~~v 284 (507)
+.+..||+.+......
T Consensus 577 ----~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 577 ----NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp ----SCEEEEETTTCCEEEC
T ss_pred ----CCeEEEcCCCceeEEe
Confidence 2478999999887654
No 176
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.68 E-value=1.9 Score=39.90 Aligned_cols=229 Identities=11% Similarity=0.059 Sum_probs=104.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
++.+++.|+.+ ..+.++|..++.-...-... . .........-++++++.|+.+
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~---------------~-~~v~~~~~~~~~~~l~s~s~d------ 76 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVT---------------E-TPVRAGKFIARKNWIIVGSDD------ 76 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECC---------------S-SCEEEEEEEGGGTEEEEEETT------
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeecc---------------C-CcEEEEEEeCCCCEEEEECCC------
Confidence 45566666643 35888998876533221111 0 011111122245556666543
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCC
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 194 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~ 194 (507)
..+.+||+.++.-...-. + -.....++.+ ++.+++.|+.+. .+.++|+.+..=......+ ...
T Consensus 77 ~~i~vwd~~~~~~~~~~~-~----h~~~v~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~~~~~~~~~----h~~ 141 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFE-A----HPDYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENNWALEQTFEG----HEH 141 (304)
T ss_dssp SEEEEEETTTCCEEEEEE-C----CSSCEEEEEECSSSSEEEEEETTS------CEEEEEGGGTTEEEEEECC----CCS
T ss_pred CEEEEEECCCCcEEEEEe-C----CCCcEEEEEEcCCCCEEEEECCCC------eEEEEECCCCcchhhhhcc----cCC
Confidence 348889998876332210 1 1111222333 345666777653 4888888665211111111 111
Q ss_pred CceEEEE-c-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE----CCeEEEEeccCCCCCc
Q 010551 195 DHSAALH-A-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI----DENWYIVGGGDNNNGC 268 (507)
Q Consensus 195 ~~~~~~~-~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~l~v~GG~~~~~~~ 268 (507)
.-..+.+ . +..+++.|+.+ ..+.+||+.+..-......+ ..+ ....+.+ ++.+++.|+.++
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~~~---~~~-~v~~~~~~~~~~~~~l~s~s~D~---- 208 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLTTG---QER-GVNYVDYYPLPDKPYMITASDDL---- 208 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETT-----SEEEEEETTCSSCSEEEECC---CTT-CEEEEEECCSTTCCEEEEEETTS----
T ss_pred cEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCccceeccC---CcC-cEEEEEEEEcCCCCEEEEEcCCC----
Confidence 1122233 2 44467777755 35888887653211100000 001 1111222 345666666433
Q ss_pred ceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 269 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 269 ~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
.+.++|+.+..- +..+.+. ......+...++..+++.|+.++ .+.++|+.+.
T Consensus 209 -~i~iWd~~~~~~--~~~~~~h------~~~v~~~~~~p~~~~l~s~s~Dg----~i~iWd~~~~ 260 (304)
T 2ynn_A 209 -TIKIWDYQTKSC--VATLEGH------MSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTY 260 (304)
T ss_dssp -EEEEEETTTTEE--EEEEECC------SSCEEEEEECSSSSEEEEEETTS----CEEEEETTTC
T ss_pred -eEEEEeCCCCcc--ceeeCCC------CCCEEEEEECCCCCEEEEEcCCC----eEEEEECCCC
Confidence 477888877642 2222211 11122233333334566677553 4666776544
No 177
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.68 E-value=5.1 Score=45.22 Aligned_cols=190 Identities=11% Similarity=0.080 Sum_probs=91.9
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE----CCEEEEEeccCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.++|+.++.....-... .....++.+ ++.+++.|+.+
T Consensus 668 ~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~l~sg~~d-- 722 (1249)
T 3sfz_A 668 DDSYIATCSAD-----KKVKIWDSATGKLVHTYDEH------------------SEQVNCCHFTNKSNHLLLATGSND-- 722 (1249)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEECC------------------SSCEEEEEECSSSSCCEEEEEETT--
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCceEEEEcCC------------------CCcEEEEEEecCCCceEEEEEeCC--
Confidence 45566666533 35889999887543322111 111223333 23345555532
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCC--
Q 010551 113 SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT-- 188 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~-- 188 (507)
..+.+||+.++.-..... . ......++.+ ++..++.|+.+ +.+.++|+.+..-........
T Consensus 723 ----~~v~vwd~~~~~~~~~~~---~--h~~~v~~~~~sp~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~~~~ 787 (1249)
T 3sfz_A 723 ----FFLKLWDLNQKECRNTMF---G--HTNSVNHCRFSPDDELLASCSAD------GTLRLWDVRSANERKSINVKRFF 787 (1249)
T ss_dssp ----SCEEEEETTSSSEEEEEC---C--CSSCEEEEEECSSTTEEEEEESS------SEEEEEEGGGTEEEEEEECCCCC
T ss_pred ----CeEEEEECCCcchhheec---C--CCCCEEEEEEecCCCEEEEEECC------CeEEEEeCCCCcccceecccccc
Confidence 238899998887543321 1 1111222333 45566667654 358888887664332211100
Q ss_pred ----CC---CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEE-ECCeEEEEe
Q 010551 189 ----PP---APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT-IDENWYIVG 260 (507)
Q Consensus 189 ----~p---~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~l~v~G 260 (507)
.+ ......+++...++..+++++. +.+.+||+.+.........+. .....+++. -++.++++|
T Consensus 788 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~------~~v~~~d~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~ 858 (1249)
T 3sfz_A 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAAK------NKVLLFDIHTSGLLAEIHTGH---HSTIQYCDFSPYDHLAVIA 858 (1249)
T ss_dssp --------CCCCCBCCCCBCTTSSEEEEEET------TEEEEEETTTCCEEEEEECSS---SSCCCEEEECSSTTEEEEE
T ss_pred cccCCccccccceEEEEEECCCCCEEEEEcC------CcEEEEEecCCCceeEEcCCC---CCceEEEEEcCCCCEEEEE
Confidence 00 0011112222234445555542 478999998877554321111 111112222 245677777
Q ss_pred ccCCCCCcceEEEEECCCCc
Q 010551 261 GGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 261 G~~~~~~~~~~~~~d~~~~~ 280 (507)
+.++ .+.++|+.+..
T Consensus 859 ~~dg-----~v~vwd~~~~~ 873 (1249)
T 3sfz_A 859 LSQY-----CVELWNIDSRL 873 (1249)
T ss_dssp CSSS-----CEEEEETTTTE
T ss_pred eCCC-----eEEEEEcCCCc
Confidence 6543 37788887764
No 178
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=94.64 E-value=0.7 Score=36.97 Aligned_cols=90 Identities=18% Similarity=0.238 Sum_probs=36.0
Q ss_pred HHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----HHHHHHH
Q 010551 397 DKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQ 472 (507)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~le~e~~ 472 (507)
+...++..+........+|......+..+...+..+|+..+..+....+++..+..+-.+++.++..+. +.+....
T Consensus 21 el~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee~~~ 100 (129)
T 2fxo_A 21 EFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNA 100 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333334444444444444444344444333333334444444333344444444333 2233334
Q ss_pred HHHHhHHHHHHHHH
Q 010551 473 ILRQQKSAFEQEME 486 (507)
Q Consensus 473 ~~~~~~~~~~~~~~ 486 (507)
.+...+..++.+..
T Consensus 101 ~L~~~kkkle~e~~ 114 (129)
T 2fxo_A 101 ELTAKKRKLEDECS 114 (129)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444443
No 179
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=94.62 E-value=0.56 Score=38.77 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=17.2
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHHHhhHHHhh
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAER 444 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~ 444 (507)
..+|+..+..++.....+++++..++.++++++
T Consensus 50 ~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr 82 (168)
T 3o0z_A 50 NRELQERNRILENSKSQTDKDYYQLQAILEAER 82 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444445555556666666666554
No 180
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=94.57 E-value=0.7 Score=34.72 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=21.4
Q ss_pred hHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhh
Q 010551 405 LTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERS 445 (507)
Q Consensus 405 ~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~ 445 (507)
+.....+...|.++|.+++++.+.+..++...+.+...+..
T Consensus 13 L~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 13 LKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 33334455555555666666655555555555554444433
No 181
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.56 E-value=3.7 Score=42.39 Aligned_cols=110 Identities=13% Similarity=0.086 Sum_probs=58.9
Q ss_pred CCCeEeeC-CCC--ceEEeecCCCCCC--c---cccceEEE--ECCE----EEEEcCCCCCccCCceEEEEccCCc--ee
Q 010551 3 SGSWHLEL-PYD--LWVTLPVSGARPS--P---RYKHAAAV--FDQK----LYIVGGSRNGRFLSDVQVFDLRSLA--WS 66 (507)
Q Consensus 3 ~~~~~~d~-~~~--~W~~~~~~~~~p~--~---r~~~~~~~--~~~~----iyi~GG~~~~~~~~~~~~~d~~~~~--W~ 66 (507)
..++++|. .+. .|+.-+....... + ....+.++ .++. ||+... ...++.+|..+++ |+
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------DGNVAALNAETGETVWK 146 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------TSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------CCEEEEEECCCCCEEEe
Confidence 34788888 554 6887553111000 1 11223444 4666 877643 2469999998875 87
Q ss_pred eeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCc--EEEee
Q 010551 67 NLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVME 133 (507)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 133 (507)
.-..... .......+-++.++.||+-++... ......++.||..|++ |+.-.
T Consensus 147 ~~~~~~~--------------~~~~~~ssP~v~~g~V~vg~~g~e-~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 147 VENSDIK--------------VGSTLTIAPYVVKDKVIIGSSGAE-LGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EECCCGG--------------GTCBCCSCCEEETTEEEECCBCGG-GTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCCCC--------------ccceeecCCEEECCEEEEEecccc-cCCCCeEEEEECCCCcEEEEEcC
Confidence 5322110 000112233456888776443211 1123469999999886 87653
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.55 E-value=4 Score=42.79 Aligned_cols=189 Identities=12% Similarity=0.127 Sum_probs=91.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.+ ..+.++|+.++.-...-... ......+.+ ++..++.|+.+.
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~h------------------~~~v~~~~~s~~~~~l~s~s~D~--- 494 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVGH------------------TKDVLSVAFSLDNRQIVSASRDR--- 494 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECC------------------SSCEEEEEECTTSSCEEEEETTS---
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeCC------------------CCCEEEEEEeCCCCEEEEEeCCC---
Confidence 55666666643 45888998876433221110 011122222 455556665432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEEC--C--EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVG--S--RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP 190 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~--~--~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p 190 (507)
.+.+||.....-..+.. .....+....++.+. + .+++.|+.+. .+.++|+.+.+-...-. +.
T Consensus 495 ---~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~-~h-- 560 (694)
T 3dm0_A 495 ---TIKLWNTLGECKYTISE--GGEGHRDWVSCVRFSPNTLQPTIVSASWDK------TVKVWNLSNCKLRSTLA-GH-- 560 (694)
T ss_dssp ---CEEEECTTSCEEEEECS--STTSCSSCEEEEEECSCSSSCEEEEEETTS------CEEEEETTTCCEEEEEC-CC--
T ss_pred ---EEEEEECCCCcceeecc--CCCCCCCcEEEEEEeCCCCcceEEEEeCCC------eEEEEECCCCcEEEEEc-CC--
Confidence 37778876543222221 111111222333342 2 4566666543 58899998766433211 00
Q ss_pred CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcce
Q 010551 191 APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 191 ~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~ 270 (507)
...-.+++...++.+++.|+.+ ..+.++|+.++.-... .......++++...+..+++++.. ..
T Consensus 561 -~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~-----~~ 624 (694)
T 3dm0_A 561 -TGYVSTVAVSPDGSLCASGGKD-----GVVLLWDLAEGKKLYS-----LEANSVIHALCFSPNRYWLCAATE-----HG 624 (694)
T ss_dssp -SSCEEEEEECTTSSEEEEEETT-----SBCEEEETTTTEEEEC-----CBCSSCEEEEEECSSSSEEEEEET-----TE
T ss_pred -CCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCceEEE-----ecCCCcEEEEEEcCCCcEEEEEcC-----CC
Confidence 1111223333455577777754 3588899887764321 111112233333334334444422 23
Q ss_pred EEEEECCCCcE
Q 010551 271 TIVLNMTKLAW 281 (507)
Q Consensus 271 ~~~~d~~~~~W 281 (507)
+.++|+.+..-
T Consensus 625 i~iwd~~~~~~ 635 (694)
T 3dm0_A 625 IKIWDLESKSI 635 (694)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCCC
Confidence 78888887653
No 183
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.50 E-value=3.5 Score=39.44 Aligned_cols=142 Identities=13% Similarity=0.035 Sum_probs=72.1
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcC-cEEEEE---CCEEEEEcCCCCCCCccCcEEEEECCCC--cEEEeccCCCCCC
Q 010551 118 IVRFIDLETNLCGVMETSGKVPVTRGG-HSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETM--TWDAVEVTQTPPA 191 (507)
Q Consensus 118 ~~~~yd~~t~~W~~~~~~g~~p~~r~~-~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~t~--~W~~~~~~~~~p~ 191 (507)
.+.+||+.++.-...... ..+.+... ..++.+ ++.+++.|+.+. .+.+||+... .-..+.. .
T Consensus 181 ~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~~-----h 248 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRITSRAVRTYHG-----H 248 (380)
T ss_dssp CEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTTTCCCCEEECC-----C
T ss_pred cEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCCCCcceEEECC-----c
Confidence 488899988875443211 12222222 122233 457888888764 4888888632 1222211 0
Q ss_pred CCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCC--CCCC-ccEEEE-ECCeEEEEeccCCCCC
Q 010551 192 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV--TGRA-GHAGIT-IDENWYIVGGGDNNNG 267 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p--~~r~-~~~~~~-~~~~l~v~GG~~~~~~ 267 (507)
...-.+++...++..++.|+.++ .+.+||+.++.-...-...... .... -.+++. .++.+++.|+.++
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--- 320 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--- 320 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS---
T ss_pred CCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC---
Confidence 11122333444555777777653 5889999887644321111110 0011 112222 2567777776443
Q ss_pred cceEEEEECCCCcE
Q 010551 268 CQETIVLNMTKLAW 281 (507)
Q Consensus 268 ~~~~~~~d~~~~~W 281 (507)
.+.++|+.+..-
T Consensus 321 --~i~vwd~~~~~~ 332 (380)
T 3iz6_a 321 --DCYVWDTLLAEM 332 (380)
T ss_dssp --CEEEEETTTCCE
T ss_pred --CEEEEECCCCce
Confidence 478899876653
No 184
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=94.47 E-value=3.5 Score=39.30 Aligned_cols=203 Identities=16% Similarity=0.274 Sum_probs=117.8
Q ss_pred CeEe--eCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEc-------cCCceeeeccccccC
Q 010551 5 SWHL--ELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDL-------RSLAWSNLRLETELD 75 (507)
Q Consensus 5 ~~~~--d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~-------~~~~W~~~~~~~~~~ 75 (507)
.|.+ .+....|..-. .|..|..-.-|+.+.+++.=|.+|=.+++..-..+-++-. ....=+.++..
T Consensus 260 ~W~~~T~F~~spW~~t~-L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se---- 334 (670)
T 3ju4_A 260 NWHMGTSFHKSPWRKTD-LGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE---- 334 (670)
T ss_dssp EEEEEECSTTSCCEEEE-CCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG----
T ss_pred eeeeeeeeccCCceecc-cccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh----
Confidence 3554 45667887655 3457777888999999988888873333322222222211 11112222221
Q ss_pred CCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCC--CcCcEEEEECCE
Q 010551 76 ADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVT--RGGHSVTLVGSR 153 (507)
Q Consensus 76 ~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~--r~~~~~~~~~~~ 153 (507)
..+.....++-..++.||+.--.......-+++.+-+.....|+.+.. |.. ....-.+.+++.
T Consensus 335 -----------y~~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrf----p~nvHhtnlPFakvgD~ 399 (670)
T 3ju4_A 335 -----------YEPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRF----PHNVHHTTLPFAKVGDD 399 (670)
T ss_dssp -----------GCTTEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEEC----TTCCCSSCCCEEEETTE
T ss_pred -----------hccccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheec----cccccccCCCcceeCCE
Confidence 112334455666799999986554444445667777778888999863 322 233346778999
Q ss_pred EEEEcCCCC---------CCCc---cCcEEE--EEC-----CCCcEEEecc---CCCCCCCCCCceEEEEcCCEE-EEEc
Q 010551 154 LIIFGGEDR---------SRKL---LNDVHF--LDL-----ETMTWDAVEV---TQTPPAPRYDHSAALHANRYL-IVFG 210 (507)
Q Consensus 154 iy~~GG~~~---------~~~~---~n~~~~--~d~-----~t~~W~~~~~---~~~~p~~r~~~~~~~~~~~~l-~v~G 210 (507)
||+||-.-. +..+ ....++ .++ +.-.|..+.. .|.....-.+.+.+++.++.| ||||
T Consensus 400 l~mFgsERA~nEWE~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFG 479 (670)
T 3ju4_A 400 LIMFGSERAENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFG 479 (670)
T ss_dssp EEEEEECSSTTCSSTTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEE
T ss_pred EEEEeccccccccccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEec
Confidence 999986321 1111 122333 233 3345776643 355566666777788888876 7889
Q ss_pred CCC-----------------CCCCCCcEEEEECC
Q 010551 211 GCS-----------------HSIFFNDLHVLDLQ 227 (507)
Q Consensus 211 G~~-----------------~~~~~~~i~~~d~~ 227 (507)
|-+ +.....|+|.|.+.
T Consensus 480 gEd~~np~s~gdN~~k~~~~~~Ghp~dlY~~ri~ 513 (670)
T 3ju4_A 480 GEDHFNPWTYGDNSAKDPFKSDGHPSDLYCYKMK 513 (670)
T ss_dssp EBCSCCCCTTTTTTTCCTTSTTCCCCEEEEEEEE
T ss_pred CcccCCccccccccccCccccCCCCcceEEEEEE
Confidence 854 12344578888754
No 185
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.46 E-value=0.78 Score=45.13 Aligned_cols=147 Identities=7% Similarity=0.055 Sum_probs=76.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
++.+++.|+.++ .+.+||+.++.-..... .........++.+ ++.+++.|+.++ .+.++|+.
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~---~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIK---GIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEEC---CCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEE---ccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeecc
Confidence 456777777543 38888888776443321 1111112223333 456667777653 48889998
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE---C
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---D 253 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~ 253 (507)
+.....+..... ......++....++.+++.|+.+ ..+.++|+....-..+ ......-..+.+ +
T Consensus 196 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~~~~~------~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 196 GNILRVFASSDT--INIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKELWNL------RMHKKKVTHVALNPCC 262 (435)
T ss_dssp SCEEEEEECCSS--CSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCBCCCS------BCCSSCEEEEEECTTC
T ss_pred CCceeEEeccCC--CCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcceeEEE------ecccceEEeeeecCCC
Confidence 877665543211 12222334444555577777754 3588888865432111 111111122233 2
Q ss_pred CeEEEEeccCCCCCcceEEEEECCCC
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
+.+++.|+.++ .+.+||+.+.
T Consensus 263 ~~~~~s~s~d~-----~v~iwd~~~~ 283 (435)
T 4e54_B 263 DWFLATASVDQ-----TVKIWDLRQV 283 (435)
T ss_dssp SSEEEEEETTS-----BCCEEETTTC
T ss_pred ceEEEEecCcc-----eeeEEecccc
Confidence 35676766443 3557777654
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.44 E-value=2.1 Score=45.00 Aligned_cols=242 Identities=10% Similarity=-0.033 Sum_probs=113.9
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCC--------ccCCceEEEEccCCcee--eecccc
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNG--------RFLSDVQVFDLRSLAWS--NLRLET 72 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~--------~~~~~~~~~d~~~~~W~--~~~~~~ 72 (507)
..+|++|+.+++..... ..+.......+-.-+++.++++..+.. .....++.+++.++.-. .+....
T Consensus 147 ~~i~v~dl~tg~~~~~~---~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVD---VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp CEEEEEETTTCCBCSSC---CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred EEEEEEECCCCCCcCCc---ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC
Confidence 34678888887764111 122222122222225555555544322 23456899998876532 221111
Q ss_pred ccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEEC
Q 010551 73 ELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVG 151 (507)
Q Consensus 73 ~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~ 151 (507)
..+....+.... +++..+++..... ..+.++.+|..++.|..+... .. .....+..+
T Consensus 224 ---------------~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~----~~-~~~~~~~~~ 281 (695)
T 2bkl_A 224 ---------------GDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKG----VG-AKYEVHAWK 281 (695)
T ss_dssp ---------------CCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEEC----SS-CCEEEEEET
T ss_pred ---------------CCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecC----CC-ceEEEEecC
Confidence 001111222222 3443333332221 256789998888888887632 11 112223345
Q ss_pred CEEEEEcCCCCCCCccCcEEEEECCCCc---EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 152 SRLIIFGGEDRSRKLLNDVHFLDLETMT---WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 152 ~~iy~~GG~~~~~~~~n~~~~~d~~t~~---W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
+.+|+....+. ....++.+|+.+.. |..+.... +......+.+.++.+++....++ ...++.+++..
T Consensus 282 g~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g 351 (695)
T 2bkl_A 282 DRFYVLTDEGA---PRQRVFEVDPAKPARASWKEIVPED----SSASLLSVSIVGGHLSLEYLKDA---TSEVRVATLKG 351 (695)
T ss_dssp TEEEEEECTTC---TTCEEEEEBTTBCSGGGCEEEECCC----SSCEEEEEEEETTEEEEEEEETT---EEEEEEEETTC
T ss_pred CcEEEEECCCC---CCCEEEEEeCCCCCccCCeEEecCC----CCCeEEEEEEECCEEEEEEEECC---EEEEEEEeCCC
Confidence 56555544322 13569999987765 88875421 11111122233666776654332 24688888765
Q ss_pred CcEEecccCCCCCCCCCccEEEE-ECC-eEEEEeccCCCCCcceEEEEECCCCcEEEec
Q 010551 229 NEWSQPEIKGDLVTGRAGHAGIT-IDE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 229 ~~W~~~~~~~~~p~~r~~~~~~~-~~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~ 285 (507)
..-..+. .|.......+.. -++ .+++... +...-..++.||+.++..+.+.
T Consensus 352 ~~~~~l~----~~~~~~v~~~~~s~d~~~l~~~~s--s~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 352 KPVRTVQ----LPGVGAASNLMGLEDLDDAYYVFT--SFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp CEEEECC----CSSSSEECCCBSCTTCSEEEEEEE--ETTEEEEEEEEETTTCCEEEEE
T ss_pred CeeEEec----CCCCeEEEEeecCCCCCEEEEEEc--CCCCCCEEEEEECCCCcEEEEe
Confidence 4333331 111111000000 123 3333321 1122346889999887766554
No 187
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=94.38 E-value=3.4 Score=39.41 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=73.5
Q ss_pred ccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEEC-----CCCcEEEeecCCCCCCCCcCcEEEEECC
Q 010551 78 KTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDL-----ETNLCGVMETSGKVPVTRGGHSVTLVGS 152 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~-----~t~~W~~~~~~g~~p~~r~~~~~~~~~~ 152 (507)
|+.-.+++..|....-|+.+.+++.-|.+|-++++.....--..|-+ ....-++..+. .........++-.+++
T Consensus 271 pW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~s-ey~~~AsEPCvkyYdg 349 (670)
T 3ju4_A 271 PWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPS-EYEPDASEPCIKYYDG 349 (670)
T ss_dssp CCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCG-GGCTTEEEEEEEEETT
T ss_pred CceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechh-hhccccccchhhhhCC
Confidence 33334456667777889999999999999988776553222222211 11222222111 1112222334455799
Q ss_pred EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCce---EEEEcCCEEEEEcCC
Q 010551 153 RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHS---AALHANRYLIVFGGC 212 (507)
Q Consensus 153 ~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~---~~~~~~~~l~v~GG~ 212 (507)
.||+.--.......-..+++-+.....|+.+.. | ...+|+ .+.+ ++.|||||--
T Consensus 350 vLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrf----p-~nvHhtnlPFakv-gD~l~mFgsE 406 (670)
T 3ju4_A 350 VLYLITRGTRGDRLGSSLHRSRDIGQTWESLRF----P-HNVHHTTLPFAKV-GDDLIMFGSE 406 (670)
T ss_dssp EEEEEEEESCTTSCCCEEEEESSTTSSCEEEEC----T-TCCCSSCCCEEEE-TTEEEEEEEC
T ss_pred EEEEEecCcCCCCCcceeeeecccCCchhheec----c-ccccccCCCccee-CCEEEEEecc
Confidence 999985433333345678888888889999964 3 222332 3445 5559999864
No 188
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.38 E-value=2.5 Score=43.91 Aligned_cols=156 Identities=8% Similarity=-0.039 Sum_probs=76.4
Q ss_pred ceEEEEECC--C-CcEEEeecCCCCCC--CCcCcEEEEE--CCEEEEEcCCCC----CCCccCcEEEEECCC------Cc
Q 010551 117 MIVRFIDLE--T-NLCGVMETSGKVPV--TRGGHSVTLV--GSRLIIFGGEDR----SRKLLNDVHFLDLET------MT 179 (507)
Q Consensus 117 ~~~~~yd~~--t-~~W~~~~~~g~~p~--~r~~~~~~~~--~~~iy~~GG~~~----~~~~~n~~~~~d~~t------~~ 179 (507)
..+|.+++. + +.-..+. ..+. .........+ +++.+++...+. .......++.+|+.+ ..
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~---~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLT---PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp CCEEEECTTSTTCCCCEECS---CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CeEEEEcCCCCCCCCCEecc---CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 359999987 4 6655554 2221 1111122222 454444443321 112246799999988 66
Q ss_pred EEEec-cCCCCCCCCCCceEEEEcCCEEEEEcCCCCC-C--CCCcEEEEECC-CC---cEEecccCCCCCCCCCccEEEE
Q 010551 180 WDAVE-VTQTPPAPRYDHSAALHANRYLIVFGGCSHS-I--FFNDLHVLDLQ-TN---EWSQPEIKGDLVTGRAGHAGIT 251 (507)
Q Consensus 180 W~~~~-~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~-~--~~~~i~~~d~~-~~---~W~~~~~~~~~p~~r~~~~~~~ 251 (507)
-..+. .. .........-.++..+++...+.. . ..++++++|+. ++ ....+... . .......+.
T Consensus 179 ~~~l~~~~-----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~-~~~~~~~~~ 249 (662)
T 3azo_A 179 VRELSDDA-----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---P-EEAIAQAEW 249 (662)
T ss_dssp SEESSCSC-----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---T-TBCEEEEEE
T ss_pred eeEEEecC-----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---C-CceEcceEE
Confidence 65553 21 111112222234434444332221 1 23579999998 56 34433210 0 111112222
Q ss_pred E-CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccC
Q 010551 252 I-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 287 (507)
Q Consensus 252 ~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~ 287 (507)
. ++++|+.+..+ ....+|.+|+.+..+..+...
T Consensus 250 spdg~l~~~~~~~---~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 250 APDGSLIVATDRT---GWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp CTTSCEEEEECTT---SSCEEEEECTTTCCEEESSCC
T ss_pred CCCCeEEEEECCC---CCeEEEEEECCCCceeecccc
Confidence 2 56666665432 234799999988888887543
No 189
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=94.33 E-value=0.47 Score=35.89 Aligned_cols=35 Identities=3% Similarity=0.144 Sum_probs=20.2
Q ss_pred hhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhh
Q 010551 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERS 445 (507)
Q Consensus 411 ~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~ 445 (507)
+...|..+|..+++.+.+...++...+.++.+.++
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~ 59 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKI 59 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666666666665555555555555444
No 190
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.33 E-value=0.21 Score=40.46 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=36.1
Q ss_pred HHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH
Q 010551 408 VRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 408 ~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
.+.+...|++++++..+++..+.+++...+.+++..++...+++.++.++++++.+++
T Consensus 73 ~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 73 AKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666666666666666666666666666666666666665555543
No 191
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.31 E-value=1.4 Score=42.68 Aligned_cols=156 Identities=17% Similarity=0.085 Sum_probs=77.8
Q ss_pred EEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 102 ~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
.+++.|+.+. .+.+||+.++....... .........++.+ ++.+++.|+.+ +.+.+||+.+.+
T Consensus 145 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGCDN------VILVWDVGTGAAVLTLG---PDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEETTS------CEEEEETTTTEEEEEEC---TTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTE
T ss_pred CEEEEEcCCC------EEEEEECCCCCccEEEe---cCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCc
Confidence 4677776532 38999999886544321 0111112233333 45666777654 359999998876
Q ss_pred EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcE--EecccCCCCCCCCCccEEEEE-CC-e
Q 010551 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW--SQPEIKGDLVTGRAGHAGITI-DE-N 255 (507)
Q Consensus 180 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W--~~~~~~~~~p~~r~~~~~~~~-~~-~ 255 (507)
-...-..+ ........++...++.+++.|... ..-..+.+||+.+..- ... .........+++.. ++ .
T Consensus 210 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~ 281 (402)
T 2aq5_A 210 VVAEKDRP--HEGTRPVHAVFVSEGKILTTGFSR--MSERQVALWDTKHLEEPLSLQ----ELDTSSGVLLPFFDPDTNI 281 (402)
T ss_dssp EEEEEECS--SCSSSCCEEEECSTTEEEEEEECT--TCCEEEEEEETTBCSSCSEEE----ECCCCSSCEEEEEETTTTE
T ss_pred eeeeeccC--CCCCcceEEEEcCCCcEEEEeccC--CCCceEEEEcCccccCCceEE----eccCCCceeEEEEcCCCCE
Confidence 43332111 111112344445567677776211 1124688999876432 111 01111112222333 33 4
Q ss_pred EEEEeccCCCCCcceEEEEECCCCc--EEEec
Q 010551 256 WYIVGGGDNNNGCQETIVLNMTKLA--WSILT 285 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~~~~--W~~v~ 285 (507)
+++.|+.++ .+.+||+.+.. ...+.
T Consensus 282 l~~~g~~dg-----~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 282 VYLCGKGDS-----SIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEEETTCS-----CEEEEEECSSTTCEEEEE
T ss_pred EEEEEcCCC-----eEEEEEecCCCcceEeec
Confidence 555664333 47788877765 44443
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.29 E-value=3.9 Score=41.87 Aligned_cols=198 Identities=12% Similarity=0.049 Sum_probs=99.9
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccC-CCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVT-QTPPAP 192 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~-~~~p~~ 192 (507)
...+++.|..+.....+. ..+.++.-|....- ++ ++|+... ..|.+.++|+.+++-...-.. |..|.+
T Consensus 319 ~g~v~~vd~~~~~~~~v~---~i~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTT---EISAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp TTEEEEEETTCSSEEEEE---EEECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CCeEEEEecCCCccceee---eeeccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 446888888877654444 23344444443332 23 4444332 146799999999875544444 555555
Q ss_pred CCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCc-----EEecccCCCCCCCCCccEEEEE--CCeEEEEeccCC
Q 010551 193 RYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNE-----WSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDN 264 (507)
Q Consensus 193 r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~-----W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 264 (507)
..+..+ ... .+.+|+.+-.+ .+.+.++|..+.. |+.+....... ....+ +... +.++||---.+.
T Consensus 390 g~g~~~-~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~-i~~~p~~~~l~v~~~~~~ 462 (567)
T 1qks_A 390 GRGANF-VHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG-GGSLF-IKTHPNSQYLYVDATLNP 462 (567)
T ss_dssp TTCEEE-EETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCC-EECCTTCSEEEEECTTCS
T ss_pred ccceee-ECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC-CCCEE-EEeCCCCCeEEEecCCCC
Confidence 433332 333 35577654322 1368888887633 76653321111 11111 1122 246777532221
Q ss_pred C-CCcceEEEEECCCC-------cEEEecc-----CCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 265 N-NGCQETIVLNMTKL-------AWSILTS-----VKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 265 ~-~~~~~~~~~d~~~~-------~W~~v~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+ ...+.+.+||+.+. .+..++. ++.. ..+.........+.++++.-+......+.+.++|..
T Consensus 463 ~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 463 EAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEG-----QPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp SHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSS-----CCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CcccCceEEEEECCcccccccCCCcEEeccccccccCCC-----CcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 1 11357889998766 2344421 2111 122233334444556776522112246788899987
Q ss_pred CCC
Q 010551 332 PRD 334 (507)
Q Consensus 332 ~~~ 334 (507)
+..
T Consensus 538 t~~ 540 (567)
T 1qks_A 538 TLE 540 (567)
T ss_dssp TTE
T ss_pred Cce
Confidence 653
No 193
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.25 E-value=1.7 Score=41.21 Aligned_cols=149 Identities=9% Similarity=0.053 Sum_probs=71.0
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCC-CcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVT-RGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~-r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
.+..++.|+.+ ..+.+||+.++.-..... ....+ .....++.+ +++.++.|+.+. .+.++|+.
T Consensus 92 ~d~~l~~~s~d------g~v~lWd~~~~~~~~~~~--~~~~~H~~~V~~v~~spdg~~l~sgs~d~------~i~iwd~~ 157 (344)
T 4gqb_B 92 GERGILVASDS------GAVELWELDENETLIVSK--FCKYEHDDIVSTVSVLSSGTQAVSGSKDI------CIKVWDLA 157 (344)
T ss_dssp TTTEEEEEETT------SEEEEEEECTTSSCEEEE--EEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred CCCeEEEEECC------CEEEEEeccCCCceeEee--ccccCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECC
Confidence 44444555533 248888888775322110 00001 111223333 456777777653 48899998
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEE--cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
+++-...-. + ....-..+.+ ++..+++.|+.+ +.+.+||+.+.+-...- ...........+..
T Consensus 158 ~~~~~~~~~-~----h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 158 QQVVLSSYR-A----HAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQI---GCSAPGYLPTSLAWHP 224 (344)
T ss_dssp TTEEEEEEC-C----CSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEEC---C----CCCEEEEEECS
T ss_pred CCcEEEEEc-C----cCCceEEEEecCCCCCceeeeccc-----cccccccccccceeeee---ecceeeccceeeeecC
Confidence 875433211 1 1111112222 233467777654 35888998876543310 11111111122222
Q ss_pred -CCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 253 -DENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
++++++.|+.++ .+.++|+.+..
T Consensus 225 ~~~~~l~sg~~dg-----~v~~wd~~~~~ 248 (344)
T 4gqb_B 225 QQSEVFVFGDENG-----TVSLVDTKSTS 248 (344)
T ss_dssp SCTTEEEEEETTS-----EEEEEESCC--
T ss_pred CCCcceEEeccCC-----cEEEEECCCCc
Confidence 346777776443 47788887653
No 194
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=94.22 E-value=0.22 Score=48.52 Aligned_cols=37 Identities=5% Similarity=0.130 Sum_probs=16.2
Q ss_pred hHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 428 ELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 428 e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
++++.++.++.+++.+-.+++-||..|+++..++|++
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRL 150 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRL 150 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444444444433333
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.18 E-value=2.1 Score=45.40 Aligned_cols=222 Identities=11% Similarity=0.053 Sum_probs=105.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEEcc---CCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLR---SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYK 111 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~---~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 111 (507)
|+.+|.+-- ..+.....+|+.+.. .+.|+.+-..... ... .........+ +++.++++....
T Consensus 118 G~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l----------~~~--~~~~~~~~~~SPDG~~la~~~~~~ 184 (741)
T 1yr2_A 118 GASVFYSWN-SGLMNQSQLLVRPADAPVGTKGRVLLDPNTW----------AKD--GATALDAWAASDDGRLLAYSVQDG 184 (741)
T ss_dssp TTEEEEEEE-CSSCSSCEEEEEETTSCTTCCCEEEECGGGC----------C------EEEEEEEECTTSSEEEEEEEET
T ss_pred CCEEEEEEE-cCCCeEEEEEEEcCCccCCCCCEEEECHHHh----------ccC--CCEEEEeEEECCCCCEEEEEEcCC
Confidence 566655432 222224667888876 6677765322110 000 0011122222 555555554332
Q ss_pred CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCC--------CCccCcEEEEECCCCcE--E
Q 010551 112 KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRS--------RKLLNDVHFLDLETMTW--D 181 (507)
Q Consensus 112 ~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~--------~~~~n~~~~~d~~t~~W--~ 181 (507)
... ...++++|+.++........ .... ...+...++.++++..+.. ......++.+++.+..- .
T Consensus 185 G~e-~~~i~v~dl~tg~~~~~~~~----~~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 258 (741)
T 1yr2_A 185 GSD-WRTVKFVGVADGKPLADELK----WVKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQ 258 (741)
T ss_dssp TCS-EEEEEEEETTTCCEEEEEEE----EEES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCE
T ss_pred CCc-eEEEEEEECCCCCCCCccCC----Ccee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCE
Confidence 221 35699999999987654211 1110 1112211233333333221 11245688899877652 1
Q ss_pred EeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC--c-EEecccCCCCCCCCCccEEEEECCeEEE
Q 010551 182 AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN--E-WSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 182 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
.+.. ....+........-.+++.+++.........+++|++|+.+. . |..+.... ... .......++.+++
T Consensus 259 lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~-~~~~~~dg~~l~~ 332 (741)
T 1yr2_A 259 PVFA--TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL---KAQ-WDFVDGVGDQLWF 332 (741)
T ss_dssp EEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS---SSC-EEEEEEETTEEEE
T ss_pred EEec--cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC---Cce-EEEEeccCCEEEE
Confidence 2211 111112222333334443344433322223578999999877 6 77763211 111 1122234566776
Q ss_pred EeccCCCCCcceEEEEECCC--CcEEEec
Q 010551 259 VGGGDNNNGCQETIVLNMTK--LAWSILT 285 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~--~~W~~v~ 285 (507)
.... ......++++|+.+ ..|..+.
T Consensus 333 ~s~~--~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 333 VSGD--GAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EECT--TCTTCEEEEEECSSSSCEEEEEE
T ss_pred EECC--CCCCCEEEEEeCCCCccccEEEe
Confidence 6432 22245799999988 5788875
No 196
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.14 E-value=3.5 Score=37.98 Aligned_cols=148 Identities=14% Similarity=0.056 Sum_probs=70.3
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
++.+++.|+.+. .+.+||..++.=......+ ......++.+ ++.+++.|+.+. .+.++|+.
T Consensus 108 ~~~~l~sgs~D~------~v~lWd~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~sgs~D~------~v~iwd~~ 171 (304)
T 2ynn_A 108 TKPYVLSGSDDL------TVKLWNWENNWALEQTFEG----HEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLG 171 (304)
T ss_dssp SSSEEEEEETTS------CEEEEEGGGTTEEEEEECC----CCSCEEEEEECTTCTTEEEEEETTS------EEEEEETT
T ss_pred CCCEEEEECCCC------eEEEEECCCCcchhhhhcc----cCCcEEEEEECCCCCCEEEEEeCCC------eEEEEECC
Confidence 445566666432 3788887765311111111 1111223333 346777777653 58888876
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEE---cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALH---ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI- 252 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~---~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~- 252 (507)
+..-......+ .......+.+ .++.+++.|+.+ ..+.++|+.+..-...- .+ ....-..+.+
T Consensus 172 ~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~~~-~~----h~~~v~~~~~~ 237 (304)
T 2ynn_A 172 QSTPNFTLTTG----QERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVATL-EG----HMSNVSFAVFH 237 (304)
T ss_dssp CSSCSEEEECC----CTTCEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEEEEE-EC----CSSCEEEEEEC
T ss_pred CCCccceeccC----CcCcEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCccceee-CC----CCCCEEEEEEC
Confidence 54311111000 0111112222 244466666654 36888998876543211 01 1111122233
Q ss_pred -CCeEEEEeccCCCCCcceEEEEECCCCcEE
Q 010551 253 -DENWYIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 253 -~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 282 (507)
++.+++.|+.++ .+.++|+.+..-.
T Consensus 238 p~~~~l~s~s~Dg-----~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 238 PTLPIIISGSEDG-----TLKIWNSSTYKVE 263 (304)
T ss_dssp SSSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCC-----eEEEEECCCCcee
Confidence 345677776543 3778888876543
No 197
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.13 E-value=1.7 Score=40.72 Aligned_cols=234 Identities=13% Similarity=-0.052 Sum_probs=113.2
Q ss_pred CCCeEeeCCCCceEEeecCCCC---------------CCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCce
Q 010551 3 SGSWHLELPYDLWVTLPVSGAR---------------PSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAW 65 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~---------------p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W 65 (507)
..++.||+....+..+...+.. +.....+++++. ++.|||.... ..+..||+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 3567778877777765431110 000123455555 5789987431 2488999887766
Q ss_pred eeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCC-----------CCCcceEEEEECCCCcEEEe
Q 010551 66 SNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKK-----------SSDSMIVRFIDLETNLCGVM 132 (507)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~-----------~~~~~~~~~yd~~t~~W~~~ 132 (507)
+.+..... ..+..+ -..++.. ++.||+.-..... ......+++||+.++....+
T Consensus 114 ~~~~~~~~------------~~~~~~-p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 114 TQLATSVD------------GVPFKW-LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEESEET------------TEECSC-EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEecccCC------------CCcccc-cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 55432210 001111 1223332 4678886422110 01235699999998876654
Q ss_pred ecCCCCCCCCcCcEEEEE-C-CEEEEEcCCCCCCCccCcEEEEECCC---CcEEEeccCCCCCCCCCCceEEEEcCCEEE
Q 010551 133 ETSGKVPVTRGGHSVTLV-G-SRLIIFGGEDRSRKLLNDVHFLDLET---MTWDAVEVTQTPPAPRYDHSAALHANRYLI 207 (507)
Q Consensus 133 ~~~g~~p~~r~~~~~~~~-~-~~iy~~GG~~~~~~~~n~~~~~d~~t---~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~ 207 (507)
......|. .++.- + +.||+.-.. .+.+++|++.. .....+.. .+. -..++.-.++.||
T Consensus 181 ~~~~~~p~-----gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~---~~g---P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 181 LKELHVPG-----GAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLVK---IPN---PGNIKRNADGHFW 243 (322)
T ss_dssp EEEESCCC-----EEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEEE---CSS---EEEEEECTTSCEE
T ss_pred ccCCccCc-----ceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEEe---CCC---CCCeEECCCCCEE
Confidence 32111121 22222 2 357775322 35699999875 23443321 111 1234444455688
Q ss_pred EEcCCCCC-----CCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCC
Q 010551 208 VFGGCSHS-----IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 208 v~GG~~~~-----~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
|....... ...+.+.+||+.......+......+ .....+++..+++|||.... .+.+.+|++..
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~~~-----~~~i~~~~~~~ 313 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGTLF-----HGSVGILVYDK 313 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEECSS-----CSEEEEEEC--
T ss_pred EEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEeecC-----CCceEEEeccc
Confidence 76432100 01245889998654444432211111 12222344457788876421 23567777643
No 198
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.06 E-value=2.2 Score=43.56 Aligned_cols=161 Identities=14% Similarity=0.083 Sum_probs=79.9
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCC-----cEEEeccCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM-----TWDAVEVTQTP 189 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~-----~W~~~~~~~~~ 189 (507)
.+.+.++|+.+++-......|..|.+-.+.....- ++.+|+.+..+ .+.+.++|+.+. .|+.+.....
T Consensus 345 ~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~-----d~~V~v~d~~~~~~~~~~~~~v~~l~~- 418 (543)
T 1nir_A 345 SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG-----DGSISLIGTDPKNHPQYAWKKVAELQG- 418 (543)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEEC-
T ss_pred CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC-----CceEEEEEeCCCCCchhcCeEEEEEEc-
Confidence 34588899999986665555555654333332222 35777766533 246888998772 2655543211
Q ss_pred CCCCCCceEEEE-cCCEEEEEcCCCCC-CCCCcEEEEECCCCcEE--ecccC---C-CCCCCCCccEEEEECC-eEEEEe
Q 010551 190 PAPRYDHSAALH-ANRYLIVFGGCSHS-IFFNDLHVLDLQTNEWS--QPEIK---G-DLVTGRAGHAGITIDE-NWYIVG 260 (507)
Q Consensus 190 p~~r~~~~~~~~-~~~~l~v~GG~~~~-~~~~~i~~~d~~~~~W~--~~~~~---~-~~p~~r~~~~~~~~~~-~l~v~G 260 (507)
+.... ..+... ++++||+-.-.+.. ...+.|.+||+.+.+-. .+... + .....|..|....-++ .+++.
T Consensus 419 ~g~~~-~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s- 496 (543)
T 1nir_A 419 QGGGS-LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS- 496 (543)
T ss_dssp SCSCC-CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE-
T ss_pred CCCCc-eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEE-
Confidence 11111 122223 34556652211110 12457999999987632 11110 0 1112233332222234 45543
Q ss_pred ccCCCCCcceEEEEECCCCcEEEe
Q 010551 261 GGDNNNGCQETIVLNMTKLAWSIL 284 (507)
Q Consensus 261 G~~~~~~~~~~~~~d~~~~~W~~v 284 (507)
-+++...-+.+.++|..+..-.+.
T Consensus 497 ~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 497 VWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp EECCTTSCCEEEEEETTTTEEEEE
T ss_pred eecCCCCCCeEEEEECCCceEEEe
Confidence 222222345788999998875543
No 199
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=94.00 E-value=0.75 Score=45.13 Aligned_cols=20 Identities=10% Similarity=0.290 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~ 485 (507)
.|+..++.+.++++.++..+
T Consensus 172 ~L~~~~~~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 172 VLRAVIDSLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444555555555555444
No 200
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.98 E-value=2 Score=40.33 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=57.7
Q ss_pred CEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
+.+++.|+.++ .+.+||+.++.-..... .......++.+ ++.+++.|+.++ .+.+||+.+
T Consensus 85 ~~~l~~~~~dg------~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG------IIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDH------ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC------EEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTS------CEEEEETTT
T ss_pred CCEEEEecCCC------EEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCC------eEEEEEeec
Confidence 56777777542 48899988876433221 01112223333 456777777643 599999988
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
.+-...-.. .......-.+++...++..++.|+.+ +.+.+||+.+..
T Consensus 148 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 148 DTLVAIFGG-VEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp TEEEEEECS-TTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred CeEEEEecc-cccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 765443210 00111112223333444466677654 368889987653
No 201
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=93.97 E-value=3.2 Score=43.58 Aligned_cols=68 Identities=7% Similarity=-0.101 Sum_probs=34.6
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCC----ccCCceEEEEccCCceeeec
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNG----RFLSDVQVFDLRSLAWSNLR 69 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~----~~~~~~~~~d~~~~~W~~~~ 69 (507)
|..+|++|+.+.+-..+.................-+++.++++..... .....++++|+.++.-..+.
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred CCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc
Confidence 345677788777665554211110001111222225555555543221 22468999999988765554
No 202
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.90 E-value=0.35 Score=58.93 Aligned_cols=13 Identities=8% Similarity=0.337 Sum_probs=9.3
Q ss_pred eEeeCCCCceEEe
Q 010551 6 WHLELPYDLWVTL 18 (507)
Q Consensus 6 ~~~d~~~~~W~~~ 18 (507)
|.+|+..+.|...
T Consensus 1252 y~~~~~~~~w~~W 1264 (3245)
T 3vkg_A 1252 YSVSIDDANWSLW 1264 (3245)
T ss_dssp EEECTTTCSEEET
T ss_pred EEEECCCCeeeeh
Confidence 5567778888764
No 203
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.86 E-value=1.7 Score=40.78 Aligned_cols=189 Identities=14% Similarity=0.092 Sum_probs=90.3
Q ss_pred CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--C---CEEEEEeccCCC
Q 010551 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G---TKLLILGGHYKK 112 (507)
Q Consensus 38 ~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~---~~lyv~GG~~~~ 112 (507)
..+++.|+... ....+.+||+.++.......... .....++.+ + +.+++.|+.+.
T Consensus 31 ~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~~~l~~~~~dg- 90 (357)
T 3i2n_A 31 AKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEK-----------------AKPIKCGTFGATSLQQRYLATGDFGG- 90 (357)
T ss_dssp SEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEE-----------------SSCEEEEECTTCCTTTCCEEEEETTS-
T ss_pred ceEEEecCccC--CCcEEEEEeCCCCcccceeeecc-----------------cCcEEEEEEcCCCCCCceEEEecCCC-
Confidence 36667776421 12468899998887654433221 111122223 2 36666666432
Q ss_pred CCCcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEE-------ECCEEEEEcCCCCCCCccCcEEEEECCCCc--EE
Q 010551 113 SSDSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTL-------VGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WD 181 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~-------~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~--W~ 181 (507)
.+.+||..++. -..+. +. ..+ -.++.. -++..++.|+.++ .+.+||+.+.. ..
T Consensus 91 -----~i~iwd~~~~~~~~~~~~--~~-~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~------~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 91 -----NLHIWNLEAPEMPVYSVK--GH-KEI--INAIDGIGGLGIGEGAPEIVTGSRDG------TVKVWDPRQKDDPVA 154 (357)
T ss_dssp -----CEEEECTTSCSSCSEEEC--CC-SSC--EEEEEEESGGGCC-CCCEEEEEETTS------CEEEECTTSCSSCSE
T ss_pred -----eEEEEeCCCCCccEEEEE--ec-ccc--eEEEeeccccccCCCccEEEEEeCCC------eEEEEeCCCCCCcce
Confidence 38888888765 11121 00 000 111111 2455666776543 58899987764 33
Q ss_pred EeccCCCCCCCCCCceEE----EEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE----C
Q 010551 182 AVEVTQTPPAPRYDHSAA----LHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI----D 253 (507)
Q Consensus 182 ~~~~~~~~p~~r~~~~~~----~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~ 253 (507)
.+..... ...+...+++ ...++.+++.|+.+ ..+.+||+.+..-..... ....-.+++.. +
T Consensus 155 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 155 NMEPVQG-ENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALRWETN-----IKNGVCSLEFDRKDIS 223 (357)
T ss_dssp EECCCTT-SCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEE-----CSSCEEEEEESCSSSS
T ss_pred eccccCC-CCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCceeeecC-----CCCceEEEEcCCCCCC
Confidence 3322100 0011111222 11344466666643 368999998876533211 11112233332 3
Q ss_pred CeEEEEeccCCCCCcceEEEEECCC
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
+..+++|+.++ .+.+||+.+
T Consensus 224 ~~~l~~~~~dg-----~i~i~d~~~ 243 (357)
T 3i2n_A 224 MNKLVATSLEG-----KFHVFDMRT 243 (357)
T ss_dssp CCEEEEEESTT-----EEEEEEEEE
T ss_pred CCEEEEECCCC-----eEEEEeCcC
Confidence 56667765433 466777654
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.81 E-value=3.9 Score=37.35 Aligned_cols=224 Identities=9% Similarity=0.024 Sum_probs=106.6
Q ss_pred CCCeEeeCCCC--ceEEeecCCCCCCccccceEEE-ECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCC
Q 010551 3 SGSWHLELPYD--LWVTLPVSGARPSPRYKHAAAV-FDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDAD 77 (507)
Q Consensus 3 ~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~ 77 (507)
..+.++|+.+. .|+.-.. .....|.+.+ .++.||+.+ .+.++.||+ ++. |+.....
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~~~W~~~~~~------ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLE-----KGWECNSVAATKAGEILFSY-------SKGAKMITR-DGRELWNIAAPA------ 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECC-----TTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TSCEEEEEECCT------
T ss_pred CEEEEEECCCCeEEEEeCCC-----ccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CCCEEEEEcCCC------
Confidence 44567777655 4554431 1112344443 377788743 245999999 553 5432210
Q ss_pred ccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCc-EEEeecCC-CCCCCCcCcEEEEECCEE
Q 010551 78 KTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSG-KVPVTRGGHSVTLVGSRL 154 (507)
Q Consensus 78 ~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~g-~~p~~r~~~~~~~~~~~i 154 (507)
...-+++..+ ++++++..... ...++.+|+.... |+.....+ ..+...........++.+
T Consensus 76 ------------~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 76 ------------GCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp ------------TCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE
T ss_pred ------------CccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE
Confidence 1112333333 55555553321 2358888874432 44322111 011111112223334555
Q ss_pred EEEcCCCCCCCccCcEEEEECCCCc--EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc--
Q 010551 155 IIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-- 230 (507)
Q Consensus 155 y~~GG~~~~~~~~n~~~~~d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-- 230 (507)
++.... .+.+..||+. ++ |+.-.. . ..+++....++.++|.+..+ +.+..||+.+++
T Consensus 139 lv~~~~------~~~v~~~d~~-G~~~w~~~~~--~-----~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 139 LVPLFA------TSEVREIAPN-GQLLNSVKLS--G-----TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIV 199 (276)
T ss_dssp EEEETT------TTEEEEECTT-SCEEEEEECS--S-----CCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEE
T ss_pred EEEecC------CCEEEEECCC-CCEEEEEECC--C-----CccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEE
Confidence 554332 2458999987 43 654321 1 12345555566577766542 358999998765
Q ss_pred EEecccCCCCCCCCC-c-cEEEEE-CCeEEEEe--ccCCCC---CcceEEEEECCCC-cEEE
Q 010551 231 WSQPEIKGDLVTGRA-G-HAGITI-DENWYIVG--GGDNNN---GCQETIVLNMTKL-AWSI 283 (507)
Q Consensus 231 W~~~~~~~~~p~~r~-~-~~~~~~-~~~l~v~G--G~~~~~---~~~~~~~~d~~~~-~W~~ 283 (507)
|+.-. ...+..+. . .+++.. ++.+||.. |..... ....++.+|.+.+ .|+.
T Consensus 200 w~~~~--~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 200 RRVNA--NDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 259 (276)
T ss_dssp EEEEG--GGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred EEecC--CCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence 66532 11122122 1 233333 66888776 432200 1223555655433 4653
No 205
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=93.68 E-value=0.62 Score=33.82 Aligned_cols=44 Identities=20% Similarity=0.255 Sum_probs=18.2
Q ss_pred HHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHH
Q 010551 418 KIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKML 461 (507)
Q Consensus 418 ~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~ 461 (507)
+++.++.+.+.....+.+...++.....+..+.+..+..+++++
T Consensus 7 Km~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKi 50 (81)
T 1ic2_A 7 KMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKL 50 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 33333333333333333444444444444444444444444433
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.49 E-value=5.6 Score=38.19 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=72.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
+++.++.|+.+. .+.+||+.+++-..... + . .....++.+ ++..++.|+.+ ..+.++|+.+
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~~-~--h--~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMILQ-G--H--EQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEEC-C--C--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEc-c--C--CCCEEEEEEcCCCCEEEEecCC------CcEEEEECCC
Confidence 566667776432 48899998886543321 1 1 111222333 34555666654 3588899988
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCC--CCCCCccEEEEE--
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL--VTGRAGHAGITI-- 252 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~--p~~r~~~~~~~~-- 252 (507)
......-.. .....+++... ++.+++.|+.++ .+.+||+.++.-......... ......-..+.+
T Consensus 197 ~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 266 (393)
T 1erj_A 197 GQCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 266 (393)
T ss_dssp TEEEEEEEC-----SSCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECT
T ss_pred CeeEEEEEc-----CCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC
Confidence 765433211 11112222222 555777777543 588899887764432100000 001111122222
Q ss_pred CCeEEEEeccCCCCCcceEEEEECCCC
Q 010551 253 DENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 253 ~~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
++..++.|+.++ .+.++|+.+.
T Consensus 267 ~g~~l~s~s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 267 DGQSVVSGSLDR-----SVKLWNLQNA 288 (393)
T ss_dssp TSSEEEEEETTS-----EEEEEEC---
T ss_pred CCCEEEEEeCCC-----EEEEEECCCC
Confidence 456677776443 4667776543
No 207
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=93.47 E-value=0.68 Score=45.19 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHhHHHHHH
Q 010551 465 QTIENEVQILRQQKSAFEQ 483 (507)
Q Consensus 465 ~~le~e~~~~~~~~~~~~~ 483 (507)
+.|+.-++.++.++++||-
T Consensus 134 rvLQsnLedq~~kIQRLEv 152 (562)
T 3ghg_A 134 QLLQKNVRAQLVDMKRLEV 152 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444433
No 208
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.35 E-value=5.5 Score=37.66 Aligned_cols=145 Identities=14% Similarity=0.075 Sum_probs=70.5
Q ss_pred CEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEE---cCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 152 SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH---ANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 152 ~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~---~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
+..++.|+.+ ..+.++|+.+.+-...-. +. ......+.+ .++.+++.|+.++ .+.+||+.+
T Consensus 166 ~~~l~t~s~D------~~v~lwd~~~~~~~~~~~-~h----~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~ 229 (354)
T 2pbi_B 166 DMQILTASGD------GTCALWDVESGQLLQSFH-GH----GADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRS 229 (354)
T ss_dssp SSEEEEEETT------SEEEEEETTTCCEEEEEE-CC----SSCEEEEEECCCSSCCEEEEEETTS-----CEEEEETTT
T ss_pred CCEEEEEeCC------CcEEEEeCCCCeEEEEEc-CC----CCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 3445555544 358889998876433211 10 011111222 1334777777653 588999988
Q ss_pred CcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEc
Q 010551 229 NEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE 306 (507)
Q Consensus 229 ~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~ 306 (507)
++....-. .....-..+.+ ++.+++.|+.++ .+.+||+.+..-..+...... ......+...
T Consensus 230 ~~~~~~~~-----~h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~~~~------~~~~~~~~~s 293 (354)
T 2pbi_B 230 GQCVQAFE-----THESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYSKESI------IFGASSVDFS 293 (354)
T ss_dssp CCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTC------CSCEEEEEEC
T ss_pred CcEEEEec-----CCCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCCc------ccceeEEEEe
Confidence 76544211 11111122223 456777777543 367888877642222111110 1122233333
Q ss_pred CceEEEEEccCCCCcCceEEEEECCC
Q 010551 307 GEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 307 ~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
.+..+++.|+.+ ..+.++|+..
T Consensus 294 ~~g~~l~~g~~d----~~i~vwd~~~ 315 (354)
T 2pbi_B 294 LSGRLLFAGYND----YTINVWDVLK 315 (354)
T ss_dssp TTSSEEEEEETT----SCEEEEETTT
T ss_pred CCCCEEEEEECC----CcEEEEECCC
Confidence 333455556644 4577777744
No 209
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.34 E-value=6.1 Score=40.55 Aligned_cols=108 Identities=12% Similarity=0.019 Sum_probs=57.1
Q ss_pred CCeEeeCCCC--ceEEeecCCCCCCcc---ccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCC
Q 010551 4 GSWHLELPYD--LWVTLPVSGARPSPR---YKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDA 76 (507)
Q Consensus 4 ~~~~~d~~~~--~W~~~~~~~~~p~~r---~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~ 76 (507)
+++++|..+. .|+.-........+. ...+.++.++.||+... ...++.+|..+++ |+........
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~AlD~~TG~~~W~~~~~~~~~-- 150 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVALNKNTGKVVWKKKFADHGA-- 150 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEEEESSSCCEEEEEECSCGGG--
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEEEECCCCCEEeeecCCCCCc--
Confidence 4788888765 688755321111111 12334567888888542 2469999998885 8754321100
Q ss_pred CccccCCCcCCCCCccceeEEEECC------EEEEEeccCCCCCCcceEEEEECCCCc--EEEe
Q 010551 77 DKTEDSGLLEVLPPMSDHCMVKWGT------KLLILGGHYKKSSDSMIVRFIDLETNL--CGVM 132 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~~~------~lyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 132 (507)
......+-++.++ .||+ |...........++.||..|++ |+..
T Consensus 151 ------------~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 151 ------------GYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp ------------TCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred ------------CcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 0001112233455 5554 4322111124469999999886 8653
No 210
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.30 E-value=5.2 Score=37.29 Aligned_cols=101 Identities=10% Similarity=0.096 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEE----ECCEEEEEeccCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK----WGTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~----~~~~lyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.++|+.++......... .....+. -++.+++.|+.+
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~~~l~~~~~d-- 150 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQHD-------------------APVKTIHWIKAPNYSCVMTGSWD-- 150 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECS-------------------SCEEEEEEEECSSCEEEEEEETT--
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeecccc-------------------CceEEEEEEeCCCCCEEEEccCC--
Confidence 45556666533 36889999887755433211 1112222 256677777653
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 113 SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
..+.+||+.++.-.... ..+ ....++....+.+++.++ .+.+.+||+....
T Consensus 151 ----g~i~vwd~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 151 ----KTLKFWDTRSSNPMMVL---QLP--ERCYCADVIYPMAVVATA-------ERGLIVYQLENQP 201 (368)
T ss_dssp ----SEEEEECSSCSSCSEEE---ECS--SCEEEEEEETTEEEEEEG-------GGCEEEEECSSSC
T ss_pred ----CcEEEEECCCCcEEEEE---ecC--CCceEEEecCCeeEEEeC-------CCcEEEEEecccc
Confidence 24888998877532221 111 122333444555544333 2357888886654
No 211
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.29 E-value=5 Score=40.86 Aligned_cols=151 Identities=12% Similarity=-0.009 Sum_probs=74.8
Q ss_pred EEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCC-CcCcEEEEE--C-CEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 103 LLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVT-RGGHSVTLV--G-SRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 103 lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~-r~~~~~~~~--~-~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
+++.|+.+ ..+.+||..+++-...-. .... .....++.+ + +..++.|+.++ .+.+||+.+.
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~ 239 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSASDR---THHKQGSFVRDVEFSPDSGEFVITVGSDR------KISCFDGKSG 239 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEEEEC---SSSCTTCCEEEEEECSTTCCEEEEEETTC------CEEEEETTTC
T ss_pred EEEEEeCC------CcEEEEeCCCcceeeeec---ccCCCCceEEEEEECCCCCCEEEEEeCCC------eEEEEECCCC
Confidence 66666643 348889988776443221 1111 002233333 4 56777777543 5899999887
Q ss_pred cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEE
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 258 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 258 (507)
+....-...... .......+.+.++.+++.|+.+ +.+.+||+.+......-.....+......+++..++..++
T Consensus 240 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (615)
T 1pgu_A 240 EFLKYIEDDQEP-VQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 313 (615)
T ss_dssp CEEEECCBTTBC-CCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEE
T ss_pred CEeEEecccccc-cCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEE
Confidence 654432110001 1111122222244466666643 3688999988765442211111111122222333566666
Q ss_pred EeccCCCCCcceEEEEECCCC
Q 010551 259 VGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 259 ~GG~~~~~~~~~~~~~d~~~~ 279 (507)
.|+.++ .+.+||+.+.
T Consensus 314 ~~~~~g-----~i~~~d~~~~ 329 (615)
T 1pgu_A 314 SLSLDG-----TLNFYELGHD 329 (615)
T ss_dssp EEETTS-----CEEEEETTEE
T ss_pred EEECCC-----CEEEEECCCC
Confidence 666443 4677777653
No 212
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=93.27 E-value=3.9 Score=35.66 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=78.9
Q ss_pred EEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCC
Q 010551 33 AAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYK 111 (507)
Q Consensus 33 ~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~ 111 (507)
++..++.+|+|=| ..+|.++.....+........ ....+.....+.... ++++|+|-|.
T Consensus 29 i~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~-----------wp~Lp~~iDAa~~~~~~~~iyfFkG~-- 88 (207)
T 1pex_A 29 ITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSF-----------WPELPNRIDAAYEHPSHDLIFIFRGR-- 88 (207)
T ss_dssp EEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHH-----------CTTSCSSCCEEEEETTTTEEEEEETT--
T ss_pred EEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHh-----------ccCCCCCccEEEEeccCCcEEEEccC--
Confidence 4456999999987 346666654433321111000 111223333332222 5899999774
Q ss_pred CCCCcceEEEEECCCCc---EEEeecCCCCCCCCcCcEEEE-E--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEecc
Q 010551 112 KSSDSMIVRFIDLETNL---CGVMETSGKVPVTRGGHSVTL-V--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEV 185 (507)
Q Consensus 112 ~~~~~~~~~~yd~~t~~---W~~~~~~g~~p~~r~~~~~~~-~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~ 185 (507)
.+|+|+..+-. =..+...| +|......-++. . ++++|+|-|. ..|+||..+.+-..-.+
T Consensus 89 ------~~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG~--------~ywr~d~~~~~~d~gyP 153 (207)
T 1pex_A 89 ------KFWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSGN--------QVWRYDDTNHIMDKDYP 153 (207)
T ss_dssp ------EEEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEETT--------EEEEEETTTTEECSSCC
T ss_pred ------EEEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeCC--------EEEEEeCcCccccCCCC
Confidence 27777633211 11222112 332111222333 2 3699999873 47999987653221000
Q ss_pred C------CCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 186 T------QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 186 ~------~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
. ..+| .... ++. ..++++|+|-| +..|+||..+..-..
T Consensus 154 r~i~~~~~Gip-~~iD-aAf-~~~g~~YfFkg-------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 154 RLIEEDFPGIG-DKVD-AVY-EKNGYIYFFNG-------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp CBHHHHSTTSC-SCCS-EEE-EETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred ccHHHcCCCCC-CCcc-EEE-EcCCcEEEEEC-------CEEEEEeCCccEEec
Confidence 0 0122 2222 333 34778999988 478999987766543
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.08 E-value=4.9 Score=36.35 Aligned_cols=224 Identities=9% Similarity=-0.031 Sum_probs=114.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSD 115 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 115 (507)
++.||+.... ...+.+||+. +....+..... ...-++++.. ++.+|+....
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~----------------~~~~~~i~~~~~g~l~v~~~~------ 81 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTP----------------DAKVMCLIVSSLGDIWFTENG------ 81 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSST----------------TCCEEEEEECTTSCEEEEETT------
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEECCCC----------------CCcceeEEECCCCCEEEEecC------
Confidence 5778886532 2468899988 66665432110 0112233332 4678876431
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCC
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 193 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r 193 (507)
...+++||+. +.+..... |........+.+ ++.+|+.... .+.+++||+. ++......... ..
T Consensus 82 ~~~v~~~d~~-g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~~~~---~~ 146 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPL----PQPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDLPNK---GS 146 (300)
T ss_dssp TTEEEEECTT-SCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEECSST---TC
T ss_pred CCeEEEECCC-CCeEEecC----CCCCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccCCCC---CC
Confidence 2359999988 77765542 211122223333 4678776432 2468999987 66665432111 11
Q ss_pred CCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCc-cEEEEE-CCeEEEEeccCCCCCcceE
Q 010551 194 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG-HAGITI-DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 194 ~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~~-~~~l~v~GG~~~~~~~~~~ 271 (507)
.-+.++...++.+|+.... .+.+++||+ ++....... +..... ..++.- ++.+|+.... ...+
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i 211 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPL----PTNAAAPVGITSGNDGALWFVEIM-----GNKI 211 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEETT-----TTEE
T ss_pred CceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeC----CCCCCCcceEEECCCCCEEEEccC-----CCEE
Confidence 2233333344557775432 146899998 666665421 111112 233332 4577776421 2358
Q ss_pred EEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEEC
Q 010551 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 330 (507)
Q Consensus 272 ~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 330 (507)
++||+ +..+..+.. +.. ......+.++.+..|++.... .+.+.+|++
T Consensus 212 ~~~~~-~g~~~~~~~-~~~------~~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~ 258 (300)
T 2qc5_A 212 GRITT-TGEISEYDI-PTP------NARPHAITAGKNSEIWFTEWG----ANQIGRITN 258 (300)
T ss_dssp EEECT-TCCEEEEEC-SST------TCCEEEEEECSTTCEEEEETT----TTEEEEECT
T ss_pred EEEcC-CCcEEEEEC-CCC------CCCceEEEECCCCCEEEeccC----CCeEEEECC
Confidence 88988 555555422 111 112223344444456664421 356777776
No 214
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=92.94 E-value=0.51 Score=34.28 Aligned_cols=15 Identities=27% Similarity=0.251 Sum_probs=5.6
Q ss_pred HhhHHHhhhhhhhhH
Q 010551 437 QGQLVAERSRCFKLE 451 (507)
Q Consensus 437 ~~~~~~~~~~~~~~e 451 (507)
..++..++.+++.++
T Consensus 40 E~ev~~L~kKiq~lE 54 (81)
T 1ic2_A 40 EDELVALQKKLKGTE 54 (81)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 215
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=92.93 E-value=1.2 Score=33.15 Aligned_cols=58 Identities=22% Similarity=0.336 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhh
Q 010551 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF 448 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~ 448 (507)
.+.++++.+.++..+.....+..+|...+.+-...-.+.++++..+..+++.+-..++
T Consensus 7 ~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLF 64 (97)
T 2eqb_B 7 YNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLF 64 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555444455555556555555555555555555555555555444333
No 216
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.85 E-value=5 Score=36.50 Aligned_cols=107 Identities=17% Similarity=0.135 Sum_probs=55.4
Q ss_pred ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 150 VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 150 ~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
-++. ++.|+.+ ..+.+||+.+.+-...-. .....-.+++...++ .++.|+.+ +.+.+||+.+.
T Consensus 194 ~~~~-~~~~~~d------g~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d-----g~v~iwd~~~~ 256 (313)
T 3odt_A 194 DDGH-FISCSND------GLIKLVDMHTGDVLRTYE----GHESFVYCIKLLPNG-DIVSCGED-----RTVRIWSKENG 256 (313)
T ss_dssp ETTE-EEEEETT------SEEEEEETTTCCEEEEEE----CCSSCEEEEEECTTS-CEEEEETT-----SEEEEECTTTC
T ss_pred CCCe-EEEccCC------CeEEEEECCchhhhhhhh----cCCceEEEEEEecCC-CEEEEecC-----CEEEEEECCCC
Confidence 3567 6666654 358999998765332211 001112233333455 35555543 36899999887
Q ss_pred cEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEE
Q 010551 230 EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
.....-. .+. ..-.+++.. ++. ++.|+.++ .+.+||+.+..+..
T Consensus 257 ~~~~~~~---~~~-~~i~~~~~~~~~~-~~~~~~dg-----~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 257 SLKQVIT---LPA-ISIWSVDCMSNGD-IIVGSSDN-----LVRIFSQEKSRWAS 301 (313)
T ss_dssp CEEEEEE---CSS-SCEEEEEECTTSC-EEEEETTS-----CEEEEESCGGGCCC
T ss_pred ceeEEEe---ccC-ceEEEEEEccCCC-EEEEeCCC-----cEEEEeCCCCceee
Confidence 6544311 111 111222322 345 45565433 47889988877644
No 217
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=92.80 E-value=6.2 Score=36.80 Aligned_cols=235 Identities=9% Similarity=-0.013 Sum_probs=115.1
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCC--ceeeeccccccCCCccc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSL--AWSNLRLETELDADKTE 80 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~~~~~ 80 (507)
.++++|+.+.+.......+.. ...+.+++- ++.||+.... ...+.+||+... .-..+......
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~---~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~------ 135 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLF---YLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQP------ 135 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTC---SSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBC------
T ss_pred cEEEEECCCCeEEeccCCCcc---CCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCC------
Confidence 356777766665543321111 122334433 5678887653 246889998654 22222211110
Q ss_pred cCCCcCCCCCccce-eEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCC----CCCCcCcEEEEE--C
Q 010551 81 DSGLLEVLPPMSDH-CMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV----PVTRGGHSVTLV--G 151 (507)
Q Consensus 81 ~~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~----p~~r~~~~~~~~--~ 151 (507)
.......... +++.. ++.||+..++. ...+.+||+....-..+...|.. +........+.+ +
T Consensus 136 ----g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 136 ----GSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp ----CCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred ----CCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 0001111122 33333 57899987521 34599999654443334322221 111111222333 3
Q ss_pred -CEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCC--CCCCCcEEEEECCC
Q 010551 152 -SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSH--SIFFNDLHVLDLQT 228 (507)
Q Consensus 152 -~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~--~~~~~~i~~~d~~~ 228 (507)
+.||+.... .+.+.+||+.+++....-... .......+++... +.+|+..|... ....+.+.++|+.+
T Consensus 207 ~g~l~v~d~~------~~~I~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 207 LDQLCVADRE------NGRIQCFKTDTKEFVREIKHA--SFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCCEEEEECCT--TTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEEecc--ccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 789887653 346999999877765443211 1111112233333 66777666421 12334799999888
Q ss_pred CcEEecccCCCCCCCCC-ccEEEEE-CCeEEEEeccCCCCCcceEEEEECC
Q 010551 229 NEWSQPEIKGDLVTGRA-GHAGITI-DENWYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 229 ~~W~~~~~~~~~p~~r~-~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~ 277 (507)
++....- +..+.... .+++++- ++.+||....+ +.+++|++.
T Consensus 278 g~~~~~~--~~~~~~~~~p~~ia~~~dG~lyvad~~~-----~~I~~~~~~ 321 (329)
T 3fvz_A 278 GEIIDVF--KPVRKHFDMPHDIVASEDGTVYIGDAHT-----NTVWKFTLT 321 (329)
T ss_dssp CCEEEEE--CCSSSCCSSEEEEEECTTSEEEEEESSS-----CCEEEEEEE
T ss_pred CeEEEEE--cCCCCccCCeeEEEECCCCCEEEEECCC-----CEEEEEeCC
Confidence 8766532 11111122 2233333 35788875432 257777654
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.78 E-value=5.9 Score=36.47 Aligned_cols=165 Identities=6% Similarity=-0.038 Sum_probs=79.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecC-CCCCCCCcCcEEEEECCEEEEE----cCCCC-------CCCcc
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS-GKVPVTRGGHSVTLVGSRLIIF----GGEDR-------SRKLL 167 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-g~~p~~r~~~~~~~~~~~iy~~----GG~~~-------~~~~~ 167 (507)
+++||+.... ...+.+|++. ++.+.+... ...+..+....++.-++.||+. |-... .....
T Consensus 96 dG~l~v~~~~------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 96 QQRLVHCEHG------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp TSCEEEEETT------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred CCCEEEEECC------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 5677765321 2358899986 776665421 0111111112222225678874 32210 01113
Q ss_pred CcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCc
Q 010551 168 NDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG 246 (507)
Q Consensus 168 n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~ 246 (507)
+.+++||+.+++...+. . .. .-.+++...+ +.||+..........+.+++|++..+...........+. ...
T Consensus 169 ~~v~~~d~~~g~~~~~~-~--~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~-~~p 241 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-D--LD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD-GLP 241 (305)
T ss_dssp EEEEEECSSSCCCEEEE-E--ES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS-SCC
T ss_pred CeEEEEcCCCCcEEEEe-c--CC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC-CCC
Confidence 56999999888877664 1 11 1123333333 457776432211112579999987654322111111111 111
Q ss_pred cEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEec
Q 010551 247 HAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 247 ~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~ 285 (507)
..++.- ++++|+..+ ..+++||+.......+.
T Consensus 242 dgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp CSEEECTTSCEEECCS-------SEEEEECTTSCEEEEEE
T ss_pred CeEEECCCCCEEEecC-------CcEEEECCCCCEEEEEE
Confidence 223332 456776532 24889999766655553
No 219
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=92.70 E-value=10 Score=41.90 Aligned_cols=75 Identities=21% Similarity=0.203 Sum_probs=40.8
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCC----CCCccCcEEEEEC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDR----SRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~----~~~~~n~~~~~d~ 175 (507)
+++.+++++.. ..++++|+.+++-..+... ........+..-+++.+++++.+. .....+.++++|+
T Consensus 389 DG~~la~~~~~------~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 389 NGKFAVVANDR------FEIMTVDLETGKPTVIERS---REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEEEEC---SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CCCEEEEECCC------CeEEEEECCCCceEEeccC---CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 45555555432 3699999999987766421 111111122222455455554422 0112457999999
Q ss_pred CCCcEEEe
Q 010551 176 ETMTWDAV 183 (507)
Q Consensus 176 ~t~~W~~~ 183 (507)
.+.+...+
T Consensus 460 ~~g~~~~l 467 (1045)
T 1k32_A 460 EGRKIFAA 467 (1045)
T ss_dssp TTTEEEEC
T ss_pred CCCcEEEe
Confidence 98875544
No 220
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.70 E-value=5.6 Score=35.97 Aligned_cols=220 Identities=11% Similarity=0.079 Sum_probs=106.0
Q ss_pred CCeEeeCCCCceEEeecCCCCCC-ccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPS-PRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTE 80 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~-~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 80 (507)
.+.+||+....-..++..+..+. ....+.+++. ++.||+.+.. ....+.+||+....-..+....
T Consensus 52 ~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~~~-------- 119 (286)
T 1q7f_A 52 RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQFVRKFGATI-------- 119 (286)
T ss_dssp EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSCEEEEECTTT--------
T ss_pred EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcEEEEecCcc--------
Confidence 35667766443334432221111 1223444442 6789888632 1246889995443322222110
Q ss_pred cCCCcCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEE
Q 010551 81 DSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 81 ~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~ 157 (507)
...-++++.. ++++|+.... ...+++||+.......+...+.. .....+.+ ++.+|+.
T Consensus 120 ---------~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 120 ---------LQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHL----EFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp ---------CSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTC----SSEEEEEECSSSEEEEE
T ss_pred ---------CCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCcc----CCcEEEEECCCCCEEEE
Confidence 0111233332 5678886542 24589999776554444321111 11223333 4688876
Q ss_pred cCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccC
Q 010551 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 158 GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
... .+.+.+||+.......+...+... .-.+++.-.++.+|+....+. ..+.+||.....-..+...
T Consensus 181 ~~~------~~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 181 DNR------AHCVKVFNYEGQYLRQIGGEGITN---YPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISALESK 247 (286)
T ss_dssp EGG------GTEEEEEETTCCEEEEESCTTTSC---SEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEEEES
T ss_pred ECC------CCEEEEEcCCCCEEEEEccCCccC---CCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEEccc
Confidence 542 356999998665444443322111 112333334566887654321 1688998765443333221
Q ss_pred CCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEEC
Q 010551 238 GDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNM 276 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~ 276 (507)
.... ..++++.. ++++||... + +.+.+|+.
T Consensus 248 ~~~~---~~~~i~~~~~g~l~vs~~-~-----~~v~v~~~ 278 (286)
T 1q7f_A 248 VKHA---QCFDVALMDDGSVVLASK-D-----YRLYIYRY 278 (286)
T ss_dssp SCCS---CEEEEEEETTTEEEEEET-T-----TEEEEEEC
T ss_pred CCCC---cceeEEECCCCcEEEECC-C-----CeEEEEEc
Confidence 1111 12233333 567887732 1 35666664
No 221
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.65 E-value=5.3 Score=35.62 Aligned_cols=234 Identities=12% Similarity=0.022 Sum_probs=112.8
Q ss_pred ccceEEEE-CCEEEE-EcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEE
Q 010551 29 YKHAAAVF-DQKLYI-VGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLI 105 (507)
Q Consensus 29 ~~~~~~~~-~~~iyi-~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv 105 (507)
..+++++- ++.||+ .... ...+.+||+.+.......... ...-++++.. ++.||+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~-----------------~~~p~~i~~~~~g~l~v 82 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNG-----------------LYQPQGLAVDGAGTVYV 82 (270)
T ss_dssp CEEEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCCS-----------------CCSCCCEEECTTCCEEE
T ss_pred CccceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeCC-----------------cCCcceeEECCCCCEEE
Confidence 33444443 567888 5332 246888988776544332211 0111233333 467887
Q ss_pred EeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEe
Q 010551 106 LGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAV 183 (507)
Q Consensus 106 ~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~ 183 (507)
... ...+++||+.+......... .........+ ++++|+.... .+.+++|+..+......
T Consensus 83 ~~~-------~~~i~~~d~~~~~~~~~~~~-----~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 83 TDF-------NNRVVTLAAGSNNQTVLPFD-----GLNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp EET-------TTEEEEECTTCSCCEECCCC-----SCSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEEC
T ss_pred EcC-------CCEEEEEeCCCceEeeeecC-----CcCCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEee
Confidence 754 12589999888765443211 1111222333 4578776432 24588888766654433
Q ss_pred ccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEecc
Q 010551 184 EVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGG 262 (507)
Q Consensus 184 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~ 262 (507)
... . ...-..++...++.+|+.... .+.+++||+....-..... ... ....+++.. ++.+|+....
T Consensus 145 ~~~-~---~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~-~~~---~~p~~i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 145 PFT-G---LNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPF-TDI---TAPWGIAVDEAGTVYVTEHN 211 (270)
T ss_dssp CCC-S---CCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCC-SSC---CSEEEEEECTTCCEEEEETT
T ss_pred ccc-c---CCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeecc-cCC---CCceEEEECCCCCEEEEECC
Confidence 211 1 112233444445568876432 2468999988765443211 111 112233333 3478877532
Q ss_pred CCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 263 DNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
+ +.+.+||+....-..+.. .. ......+.++.+..||+.... .+.+.+|++..
T Consensus 212 ~-----~~v~~~~~~~~~~~~~~~-~~-------~~~p~~i~~~~~g~l~v~~~~----~~~v~~~~~~~ 264 (270)
T 1rwi_B 212 T-----NQVVKLLAGSTTSTVLPF-TG-------LNTPLAVAVDSDRTVYVADRG----NDRVVKLTSLE 264 (270)
T ss_dssp T-----SCEEEECTTCSCCEECCC-CS-------CSCEEEEEECTTCCEEEEEGG----GTEEEEECCCG
T ss_pred C-----CcEEEEcCCCCcceeecc-CC-------CCCceeEEECCCCCEEEEECC----CCEEEEEcCCC
Confidence 2 348889887654332211 10 012223344443356665432 35677777643
No 222
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.53 E-value=1.4 Score=42.09 Aligned_cols=109 Identities=9% Similarity=0.005 Sum_probs=51.0
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEE-EcCCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAAL-HANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~-~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++..++.|+.++ .+.+||+.+..-.................... ......+++++.+ +.+.+||+.++
T Consensus 256 ~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~d~~~~ 324 (408)
T 4a11_B 256 DGLHLLTVGTDN------RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVYTVYSG 324 (408)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEEETTTC
T ss_pred CCCEEEEecCCC------eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEEECcCC
Confidence 455666666543 58999998765422211111111111111111 1222234444332 36889998876
Q ss_pred cEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCC
Q 010551 230 EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 230 ~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
.-...-. + ....-.+++.. ++.+++.|+.++ .+.++|+.+.
T Consensus 325 ~~~~~~~-~---~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 325 EQITMLK-G---HYKTVDCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp CEEEEEC-C---CSSCEEEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred cceeeec-c---CCCeEEEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 6443210 1 11111122333 456777777544 3667776654
No 223
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.47 E-value=0.61 Score=56.92 Aligned_cols=14 Identities=14% Similarity=0.354 Sum_probs=7.7
Q ss_pred EEEEccCCceeeec
Q 010551 56 QVFDLRSLAWSNLR 69 (507)
Q Consensus 56 ~~~d~~~~~W~~~~ 69 (507)
|.+|+.++.|....
T Consensus 1252 y~~~~~~~~w~~W~ 1265 (3245)
T 3vkg_A 1252 YSVSIDDANWSLWK 1265 (3245)
T ss_dssp EEECTTTCSEEETT
T ss_pred EEEECCCCeeeehh
Confidence 34455566666543
No 224
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.44 E-value=8 Score=37.20 Aligned_cols=196 Identities=13% Similarity=0.072 Sum_probs=98.7
Q ss_pred CCCeEeeCCC--CceEEeecCCCCCCccccceEEEE---CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCC
Q 010551 3 SGSWHLELPY--DLWVTLPVSGARPSPRYKHAAAVF---DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDAD 77 (507)
Q Consensus 3 ~~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~---~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~ 77 (507)
.++++|+... ..|..+.. .+....-+++++. ++.||+.+... ..-..++..+-...+|+.+......
T Consensus 31 ~Gl~~~~~~~~g~~W~~~~~---~~~~~~v~~i~~dp~~~~~l~~g~~~g--~~g~gl~~s~D~G~tW~~~~~~~~~--- 102 (394)
T 3b7f_A 31 KGAWFLASDPARRTWELRGP---VFLGHTIHHIVQDPREPERMLMAARTG--HLGPTVFRSDDGGGNWTEATRPPAF--- 102 (394)
T ss_dssp TEEEEEEECTTSCSEEEEEE---ESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCC---
T ss_pred CceEEEECCCCCCCceECCc---cCCCCceEEEEECCCCCCeEEEEecCC--CCCccEEEeCCCCCCceECCccccC---
Confidence 4677887765 68998741 1112223344433 46788765321 0112467766666789987642110
Q ss_pred ccccCCCcCCCCCc-----cce--eEEEE----CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCC------
Q 010551 78 KTEDSGLLEVLPPM-----SDH--CMVKW----GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV------ 140 (507)
Q Consensus 78 ~~~~~~~~~~p~~r-----~~~--~~~~~----~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~------ 140 (507)
.....+ ..+ +++.. .+.||+.+. ..-+++.+-...+|+.+......|.
T Consensus 103 --------~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~ 167 (394)
T 3b7f_A 103 --------NKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTG 167 (394)
T ss_dssp --------CCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHC
T ss_pred --------CCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCcccccccc
Confidence 000011 111 22222 456776542 1237877777789998753111121
Q ss_pred -------CCcCcEEEEEC----CEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCC---CCCCC-----CCCceEEEE
Q 010551 141 -------TRGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ---TPPAP-----RYDHSAALH 201 (507)
Q Consensus 141 -------~r~~~~~~~~~----~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~---~~p~~-----r~~~~~~~~ 201 (507)
......++.++ +.||+..+. ..+++.+-...+|+.+.... .+|.+ ...++++..
T Consensus 168 ~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~ 240 (394)
T 3b7f_A 168 GEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQH 240 (394)
T ss_dssp CC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEEC
T ss_pred ccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEEC
Confidence 01111223332 466664321 23777776778899885311 11211 122333333
Q ss_pred cC--CEEEEEcCCCCCCCCCcEEEEECCCCcEEecc
Q 010551 202 AN--RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 202 ~~--~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
.. +.+|+..+ ..+++.+-...+|+.+.
T Consensus 241 ~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 241 PAAPDILYQQNH-------CGIYRMDRREGVWKRIG 269 (394)
T ss_dssp SSSTTEEEEEET-------TEEEEEETTTTEEECGG
T ss_pred CCCCCEEEEEcC-------CeEEEeCCCCCcceECC
Confidence 32 55666322 34888888888999874
No 225
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=92.34 E-value=1.6 Score=32.77 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=28.7
Q ss_pred hHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHh----HHHHHHHHHHHHHhHHHHHHHH
Q 010551 415 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES----SQTIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 415 l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~----~~~le~e~~~~~~~~~~~~~~~ 485 (507)
+...++.++.+-.++.++|..+..+.......+..++.+...+.++..+ ...+..++-+.+.+..+++.++
T Consensus 9 l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~ 83 (96)
T 3q8t_A 9 LQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQM 83 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444444444333333332211 1233444444444444444443
No 226
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=92.29 E-value=2 Score=32.68 Aligned_cols=7 Identities=43% Similarity=0.529 Sum_probs=2.6
Q ss_pred hhhHHHH
Q 010551 448 FKLEAQI 454 (507)
Q Consensus 448 ~~~e~~~ 454 (507)
++|+.++
T Consensus 74 qeLqgEI 80 (121)
T 3mq7_A 74 EELEGEI 80 (121)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.26 E-value=7.3 Score=36.32 Aligned_cols=135 Identities=12% Similarity=0.004 Sum_probs=68.7
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEE-EECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAA-VFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
++|+||+...+...+.. +. .-++++ .-++.+++... ..++.||+.++....+.....
T Consensus 72 ~i~~~d~~~~~~~~~~~----~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~~--------- 129 (326)
T 2ghs_A 72 ELHELHLASGRKTVHAL----PF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHAELES--------- 129 (326)
T ss_dssp EEEEEETTTTEEEEEEC----SS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEECSST---------
T ss_pred EEEEEECCCCcEEEEEC----CC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEEeeCCC---------
Confidence 57888888877665542 11 112222 23677777542 349999999988876543210
Q ss_pred CCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEEEEcCC
Q 010551 83 GLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLIIFGGE 160 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy~~GG~ 160 (507)
..+..+.....+.-++++|+.............+++|+ +++...+..... . ...++.. ++ .+|+....
T Consensus 130 ---~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~----~-~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 130 ---DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS----I-PNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp ---TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES----S-EEEEEECTTSCEEEEEETT
T ss_pred ---CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc----c-cCCeEEcCCCCEEEEEECC
Confidence 11111222222222566766332111112245799998 576665432101 1 1122222 33 57765432
Q ss_pred CCCCCccCcEEEEECC
Q 010551 161 DRSRKLLNDVHFLDLE 176 (507)
Q Consensus 161 ~~~~~~~n~~~~~d~~ 176 (507)
.+.+++||+.
T Consensus 200 ------~~~I~~~d~~ 209 (326)
T 2ghs_A 200 ------VNRLMRVPLD 209 (326)
T ss_dssp ------TCEEEEEEBC
T ss_pred ------CCEEEEEEcc
Confidence 3569999975
No 228
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=92.25 E-value=0.51 Score=35.28 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=29.4
Q ss_pred hhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH
Q 010551 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 411 ~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
++..|+-.+++.++.+.+..++.++...+++.++..+..++.++.+++.++++.+
T Consensus 31 qVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~qRD 85 (103)
T 4h22_A 31 QVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQRE 85 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555555555555555555555555555555544443
No 229
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.19 E-value=7.5 Score=36.27 Aligned_cols=146 Identities=10% Similarity=-0.048 Sum_probs=75.1
Q ss_pred CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcc
Q 010551 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSM 117 (507)
Q Consensus 38 ~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 117 (507)
+.+|+.+.. ...++.||+.++....+... ......+..-++++++... .
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~------------------~~v~~i~~~~dg~l~v~~~--------~ 109 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHALP------------------FMGSALAKISDSKQLIASD--------D 109 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEECS------------------SCEEEEEEEETTEEEEEET--------T
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEECC------------------CcceEEEEeCCCeEEEEEC--------C
Confidence 677777542 24689999988765543311 1112222234678777541 2
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCC
Q 010551 118 IVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 118 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~ 195 (507)
.+++||+.+++.+.+...... .+........+ ++.+|+.............+++|| +.+...+..... ..
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~-----~~ 181 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESD-LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS-----IP 181 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTT-CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES-----SE
T ss_pred CEEEEECCCCcEEEEeeCCCC-CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc-----cc
Confidence 499999999998876532110 11111122233 456665321111111245799998 566655432101 11
Q ss_pred ceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECC
Q 010551 196 HSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQ 227 (507)
Q Consensus 196 ~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~ 227 (507)
.+++...+ +.+|+.... .+.|++||+.
T Consensus 182 ~~i~~s~dg~~lyv~~~~-----~~~I~~~d~~ 209 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTK-----VNRLMRVPLD 209 (326)
T ss_dssp EEEEECTTSCEEEEEETT-----TCEEEEEEBC
T ss_pred CCeEEcCCCCEEEEEECC-----CCEEEEEEcc
Confidence 22333323 457775432 2579999975
No 230
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.06 E-value=8.6 Score=36.69 Aligned_cols=158 Identities=10% Similarity=0.066 Sum_probs=72.8
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCC--cEEEeecCCCCCCCCcCcEEEEE---CCEEEEEcCCCCCCCccCcEEEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVTRGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLD 174 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~---~~~iy~~GG~~~~~~~~n~~~~~d 174 (507)
++.+++.|+.+. .+.+||+.+. ....+.. .........++.+ ++.+++.|+.++ .+.+||
T Consensus 78 ~~~~l~~~~~dg------~v~vw~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~dg------~v~iwd 142 (416)
T 2pm9_A 78 NNKIIAGALDNG------SLELYSTNEANNAINSMAR---FSNHSSSVKTVKFNAKQDNVLASGGNNG------EIFIWD 142 (416)
T ss_dssp SSSCEEEEESSS------CEEEECCSSTTSCCCEEEE---CCCSSSCCCEEEECSSSTTBEEEECSSS------CEEBCB
T ss_pred CCCeEEEEccCC------eEEEeecccccccccchhh---ccCCccceEEEEEcCCCCCEEEEEcCCC------eEEEEE
Confidence 455666666432 3888888771 1112211 1111111222333 256777777643 488888
Q ss_pred CCCCcE-----EEeccCCCCCCCCCCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCC-CCCCCCcc
Q 010551 175 LETMTW-----DAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD-LVTGRAGH 247 (507)
Q Consensus 175 ~~t~~W-----~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~-~p~~r~~~ 247 (507)
+.+..= ................+++...+ +.+++.|+.+ ..+.+||+.+........... ........
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCce
Confidence 877640 01110000011112223333333 4577777754 358999998876544211110 00001222
Q ss_pred EEEEE--C-CeEEEEeccCCCCCcceEEEEECCCC
Q 010551 248 AGITI--D-ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 248 ~~~~~--~-~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
..+.+ + ..+++.|+.++. ...+.+||+.+.
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred EEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 22333 2 357777764431 124668887764
No 231
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=92.01 E-value=0.13 Score=52.87 Aligned_cols=9 Identities=0% Similarity=-0.064 Sum_probs=5.5
Q ss_pred eEEEEECCC
Q 010551 270 ETIVLNMTK 278 (507)
Q Consensus 270 ~~~~~d~~~ 278 (507)
.+.+|+..+
T Consensus 224 GI~v~~~~~ 232 (575)
T 2i1j_A 224 GLNIYEKDD 232 (575)
T ss_dssp EEEEEETTC
T ss_pred eeEEEeCCC
Confidence 366777654
No 232
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.85 E-value=2.3 Score=41.63 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCc----EEEeccCCCCCCCCCCceEEEE-c-CCEEEEEcCCCCCCCCCcEEEE
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMT----WDAVEVTQTPPAPRYDHSAALH-A-NRYLIVFGGCSHSIFFNDLHVL 224 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~----W~~~~~~~~~p~~r~~~~~~~~-~-~~~l~v~GG~~~~~~~~~i~~~ 224 (507)
++.+++.|+.+ +.+.+||+.+.. -..+.. .......+.+ . +.++++.|+.+ +.+.+|
T Consensus 243 ~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vw 305 (430)
T 2xyi_A 243 HESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFNPYSEFILATGSAD-----KTVALW 305 (430)
T ss_dssp CTTEEEEEETT------SEEEEEETTCSCSSSCSEEEEC------CSSCEEEEEECSSCTTEEEEEETT-----SEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCCCcceeEeec------CCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEE
Confidence 45677776654 358999997652 111111 1111222223 2 33477777764 358899
Q ss_pred ECCCCc--EEecccCCCCCCCCCccEEEEE---CCeEEEEeccCCCCCcceEEEEECCC
Q 010551 225 DLQTNE--WSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTK 278 (507)
Q Consensus 225 d~~~~~--W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~ 278 (507)
|+.+.. -..+. .....-..+.+ +..+++.||.++ .+.+||+..
T Consensus 306 d~~~~~~~~~~~~------~h~~~v~~i~~sp~~~~~l~s~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 306 DLRNLKLKLHSFE------SHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSK 353 (430)
T ss_dssp ETTCTTSCSEEEE------CCSSCEEEEEECSSCTTEEEEEETTS-----CCEEEEGGG
T ss_pred eCCCCCCCeEEee------cCCCCEEEEEECCCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 987632 11110 01111122222 235777777543 367788765
No 233
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=91.76 E-value=1.5 Score=32.84 Aligned_cols=71 Identities=20% Similarity=0.257 Sum_probs=40.2
Q ss_pred HHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010551 416 REKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 416 ~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~~~ 486 (507)
+.+..+++..+.++.-+.....=+.+.++..++++++.+.+++++.++.. .+......++.++..+..++.
T Consensus 8 EEKyrKAMVsnAQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 8 EEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555566666677777777776666665554443 333445555555555555554
No 234
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.75 E-value=2.5 Score=41.39 Aligned_cols=148 Identities=12% Similarity=0.106 Sum_probs=67.2
Q ss_pred EEEEcCCCCCCCccCcEEEEECCCC---cEEEeccCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 154 LIIFGGEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 154 iy~~GG~~~~~~~~n~~~~~d~~t~---~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
+++.|+.++ .+.+||+.+. .+...............++++... ++.+++.|+.+ ..+.+||+.+.
T Consensus 196 ~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDDH------TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTTS------CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCS
T ss_pred eEEEEeCCC------eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 677777643 4888998762 222110000001111122222222 44466666543 36889998865
Q ss_pred c-EEecccCCCCCCCCCccEEEEE---CCeEEEEeccCCCCCcceEEEEECCCCc--EEEeccCCCCCCCCCCCCceEEE
Q 010551 230 E-WSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLA--WSILTSVKGRNPLASEGLSVCSA 303 (507)
Q Consensus 230 ~-W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~--W~~v~~~~~~~~~~~~~~~~~~~ 303 (507)
. ...+. ...........+.+ +..+++.|+.++ .+.+||+.+.. -..+... .....++.
T Consensus 265 ~~~~~~~---~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~~~~~~~~~~~~~h--------~~~v~~i~ 328 (430)
T 2xyi_A 265 NTSKPSH---TVDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDLRNLKLKLHSFESH--------KDEIFQVQ 328 (430)
T ss_dssp CSSSCSE---EEECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTTSCSEEEECC--------SSCEEEEE
T ss_pred CCCccee---EeecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeCCCCCCCeEEeecC--------CCCEEEEE
Confidence 2 10000 00011111222333 235788877543 47888887532 1111111 01122222
Q ss_pred EEcCceEEEEEccCCCCcCceEEEEECCC
Q 010551 304 IIEGEHHLVAFGGYNGKYNNEVFVMRLKP 332 (507)
Q Consensus 304 ~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 332 (507)
..+.+..+++.||.+ ..+.++|+..
T Consensus 329 ~sp~~~~~l~s~~~d----~~i~iwd~~~ 353 (430)
T 2xyi_A 329 WSPHNETILASSGTD----RRLHVWDLSK 353 (430)
T ss_dssp ECSSCTTEEEEEETT----SCCEEEEGGG
T ss_pred ECCCCCCEEEEEeCC----CcEEEEeCCC
Confidence 333344567777754 3467777754
No 235
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=91.69 E-value=2.6 Score=32.67 Aligned_cols=7 Identities=29% Similarity=0.676 Sum_probs=2.9
Q ss_pred HHHHHHH
Q 010551 481 FEQEMER 487 (507)
Q Consensus 481 ~~~~~~~ 487 (507)
+.+++++
T Consensus 124 LrKELEd 130 (167)
T 4gkw_A 124 LRKELEN 130 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 236
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.66 E-value=7.1 Score=38.59 Aligned_cols=187 Identities=13% Similarity=0.087 Sum_probs=90.6
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCc------------eeeeccc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA------------WSNLRLE 71 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~------------W~~~~~~ 71 (507)
..|.||..+.....-.-.| + +. --++....+.+|+|-| +..+.||+.+++ |-.++..
T Consensus 168 ~yw~yd~~~~~~~~~~w~g-i--~~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~gyPk~is~~w~~c~~~ 236 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPA-V--GN-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPPGYPLDVRDYFLSCPGR 236 (460)
T ss_dssp EEEEEETTTTEEEEECCTT-S--CC-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCTTCCEEHHHHTSCCTTC
T ss_pred cEEEEecccceeecccCCC-C--Cc-cchheeeCCceEEEEC-------CEEEEEcCccCcccCCCCcchhhcccCCCCC
Confidence 4688998877554322111 2 23 3444555789999988 457888876543 2221110
Q ss_pred cccCCCccccCC--CcCCCCCc-cceeEEE-ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecC---CCCCCCCcC
Q 010551 72 TELDADKTEDSG--LLEVLPPM-SDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVTRGG 144 (507)
Q Consensus 72 ~~~~~~~~~~~~--~~~~p~~r-~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---g~~p~~r~~ 144 (507)
+..+..+....+ ......+. .-.+++. .++++|+|-|. ..|+||.....+...... ..+|.. -
T Consensus 237 g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~--------~yWR~~~~~~~~~p~~Is~~WpglP~~--I 306 (460)
T 1qhu_A 237 GHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPST--V 306 (460)
T ss_dssp CSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT--------EEEECTTGGGCCCCEEGGGTCTTSCSS--C
T ss_pred CCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC--------EEEEEecCCCCcCccchhhhccCCCCC--C
Confidence 000000000000 00000111 1223333 46899999773 266776544332221111 123332 2
Q ss_pred cEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEE-------Eec-cCCCCCCC----CCCceEEEEcCCEEEEEcCC
Q 010551 145 HSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-------AVE-VTQTPPAP----RYDHSAALHANRYLIVFGGC 212 (507)
Q Consensus 145 ~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~-------~~~-~~~~~p~~----r~~~~~~~~~~~~l~v~GG~ 212 (507)
-++...++++|+|=|. .+|+|+..++ .. .+. ..| +|.. +...+.....++++|+|-|
T Consensus 307 DAAf~~~~~~yfFkG~--------~yw~f~~~~g-~~~~~GyPK~I~~~lG-lp~~~~~~~IDAA~~~~~~~ktyfFkG- 375 (460)
T 1qhu_A 307 DAAFSWEDKLYLIQDT--------KVYVFLTKGG-YTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMAG- 375 (460)
T ss_dssp SEEEEETTEEEEEETT--------EEEEEECSBS-CEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEET-
T ss_pred cEEEEECCeEEEEeCC--------EEEEEeCCCC-ceecCCCCeEHHHhcc-CCCccccCcccEEEEeCCCCEEEEEEC-
Confidence 2444457899999773 4788876431 11 111 011 2322 1222222235678999988
Q ss_pred CCCCCCCcEEEEECCC
Q 010551 213 SHSIFFNDLHVLDLQT 228 (507)
Q Consensus 213 ~~~~~~~~i~~~d~~~ 228 (507)
+..|+||...
T Consensus 376 ------~~ywryd~~~ 385 (460)
T 1qhu_A 376 ------RRLWWLDLKS 385 (460)
T ss_dssp ------TEEEEEEGGG
T ss_pred ------CEEEEEECCC
Confidence 4799999763
No 237
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.64 E-value=14 Score=38.59 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=72.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++.+++.|+.+ ..+.+||+.++.-...-. +. .....++.+ ++..++.|+.+. .+.++|+..
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~-~h----~~~v~~~~~s~~~~~l~s~s~D~------~i~iwd~~~ 503 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRRFV-GH----TKDVLSVAFSLDNRQIVSASRDR------TIKLWNTLG 503 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEE-CC----SSCEEEEEECTTSSCEEEEETTS------CEEEECTTS
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeEEe-CC----CCCEEEEEEeCCCCEEEEEeCCC------EEEEEECCC
Confidence 55666666643 348899998876433211 11 111222233 455666676553 477788755
Q ss_pred CcEEEeccCCCCCCCCCCceEEEE-cC--CEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALH-AN--RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 252 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~-~~--~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 252 (507)
..-..+...+ ...+....++.+ .+ ..+++.|+.+ ..+.+||+.+..-...- .........+.+
T Consensus 504 ~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~-----~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 504 ECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRSTL-----AGHTGYVSTVAVSP 571 (694)
T ss_dssp CEEEEECSST--TSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEEE-----CCCSSCEEEEEECT
T ss_pred CcceeeccCC--CCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEEE-----cCCCCCEEEEEEeC
Confidence 4332232111 111111222333 22 2356666654 35888998876644321 111111122223
Q ss_pred CCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 253 DENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 253 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
++.+++.|+.++ .+.++|+.+..
T Consensus 572 dg~~l~sg~~Dg-----~i~iwd~~~~~ 594 (694)
T 3dm0_A 572 DGSLCASGGKDG-----VVLLWDLAEGK 594 (694)
T ss_dssp TSSEEEEEETTS-----BCEEEETTTTE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCc
Confidence 457777777543 36788887764
No 238
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=91.62 E-value=7.9 Score=35.34 Aligned_cols=28 Identities=11% Similarity=0.256 Sum_probs=18.8
Q ss_pred CEEEEEcCCCCCccCCceEEEEccCCceeeecc
Q 010551 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRL 70 (507)
Q Consensus 38 ~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 70 (507)
+.+++.|+.+ ..+.++|+.++.|..+..
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEE
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEE
Confidence 4566666643 358889998887765543
No 239
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=91.61 E-value=9.4 Score=36.23 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=38.9
Q ss_pred CCeEEEEeccCC-----CCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEE
Q 010551 253 DENWYIVGGGDN-----NNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFV 327 (507)
Q Consensus 253 ~~~l~v~GG~~~-----~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 327 (507)
++++|+....++ ....+.++++|+.+.+- +..++.. . .....+.+++.+||+.++ +.+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i~~~------~-p~~ia~spdg~~l~v~n~------~~v~v 329 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARIPGR------D-ALSMTIDQQRNLMLTLDG------GNVNV 329 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEEECT------T-CCEEEEETTTTEEEEECS------SCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEEecC------C-eeEEEECCCCCEEEEeCC------CeEEE
Confidence 468888754111 12245799999988753 3333221 1 233444555567887552 77888
Q ss_pred EECCCC
Q 010551 328 MRLKPR 333 (507)
Q Consensus 328 ~~~~~~ 333 (507)
+|..+.
T Consensus 330 ~D~~t~ 335 (361)
T 2oiz_A 330 YDISQP 335 (361)
T ss_dssp EECSSS
T ss_pred EECCCC
Confidence 998665
No 240
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=91.60 E-value=2 Score=31.69 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 010551 464 SQTIENEVQILRQQKSAFEQEMERATSVQT 493 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~~~~~~~~~~~~~~~ 493 (507)
..+.+.....+..++..++..+.+.+.+.+
T Consensus 58 l~eaEe~~~~L~~~K~eLE~~l~el~~rl~ 87 (89)
T 3bas_A 58 MKQLEDKVEELLSKNYHLENEVARLKKLVG 87 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445556666666666667776666655443
No 241
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=91.59 E-value=3.1 Score=31.87 Aligned_cols=74 Identities=9% Similarity=0.109 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhhhhHHHH----hhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 391 IDAIKEDKRVLELSLTEVR----TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
...|..+...|+..+.... .....|+.++..+....+.....+..+++.+..+.....-.-..++.++.++-+.
T Consensus 12 ~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~a 89 (111)
T 2v66_B 12 NQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQA 89 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4455555555555444433 3455577777777777777666667777777666666555556666666655444
No 242
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=91.51 E-value=1.1 Score=31.89 Aligned_cols=24 Identities=4% Similarity=0.104 Sum_probs=10.3
Q ss_pred hHHHHHhhHHHhhhhhhhhHHHHH
Q 010551 432 ELSSVQGQLVAERSRCFKLEAQIA 455 (507)
Q Consensus 432 el~~~~~~~~~~~~~~~~~e~~~~ 455 (507)
.++..+.+++.+++++..+++.++
T Consensus 14 klq~~E~rN~~Le~~v~~le~~Le 37 (79)
T 3cvf_A 14 KVQDLETRNAELEHQLRAMERSLE 37 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH
Confidence 344444444444444444444443
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=91.45 E-value=12 Score=36.93 Aligned_cols=180 Identities=11% Similarity=-0.026 Sum_probs=82.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCC----ceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CCEEEEEeccCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSL----AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYK 111 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~ 111 (507)
+..||+-|.. .+.+++||..++ +-.+.-...+. ........-|.+... ++ |||-.--+.
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~----------~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~ 158 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEV----------KKVSGYSRLHTVHCGPDA-IYISALGNE 158 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHH----------HHHHCEEEEEEEEECSSC-EEEEEEEET
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhc----------ccccCCCcccceeECCCe-EEEEcCCCc
Confidence 5677777764 367999999876 22221100000 000001122333444 45 777332222
Q ss_pred CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEE--c-------CCCCCC---CccCcEEEEECCC
Q 010551 112 KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIF--G-------GEDRSR---KLLNDVHFLDLET 177 (507)
Q Consensus 112 ~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~--G-------G~~~~~---~~~n~~~~~d~~t 177 (507)
.......+.++|..|++-...-..+..|. -.++-+-.. ++.+|.- | |..... .+.+.+++||+.+
T Consensus 159 ~g~~~g~v~vlD~~T~~v~~~~~~~~~~~-~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 159 EGEGPGGILMLDHYSFEPLGKWEIDRGDQ-YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp TSCSCCEEEEECTTTCCEEEECCSBCTTC-CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred CCCCCCeEEEEECCCCeEEEEEccCCCCc-cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 33345679999999887443322222222 122222222 3334433 1 222221 3468899999988
Q ss_pred CcEEEeccCCC-CCCCCCCceEEEE--cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecc
Q 010551 178 MTWDAVEVTQT-PPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 235 (507)
Q Consensus 178 ~~W~~~~~~~~-~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~ 235 (507)
.+-...-..|. -..+| +....+ ++.++||..-.+-....+.+++|....+.|....
T Consensus 238 ~k~~~tI~vg~~g~~P~--~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 238 RKRIHSLTLGEENRMAL--ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp TEEEEEEESCTTEEEEE--EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred CcEeeEEecCCCCCccc--eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 64222111110 00011 111111 2456777554222233456666555557787654
No 244
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=91.07 E-value=2.5 Score=42.16 Aligned_cols=27 Identities=22% Similarity=0.367 Sum_probs=15.2
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010551 462 ESSQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 462 ~~~~~le~e~~~~~~~~~~~~~~~~~~ 488 (507)
++++++|.++..+.++++.++.|.+++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T 3mq9_A 443 KKVEELEGEITTLNHKLQDASAEVERL 469 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556666666666666555555543
No 245
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=91.03 E-value=3.9 Score=33.49 Aligned_cols=71 Identities=24% Similarity=0.302 Sum_probs=36.4
Q ss_pred HHHHHHhhccchhHHHhHHHHHhhHHHh-------hhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHH
Q 010551 416 REKIDEVNSTHSELSKELSSVQGQLVAE-------RSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 416 ~~~l~~~~~~~~e~~~el~~~~~~~~~~-------~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~ 484 (507)
...++..+....+++.+|..+.+.+..+ .+++...+.++..++.+++..+ ..++.+..+++.+..++.+
T Consensus 34 EERae~aE~k~~eLEeeL~~v~~nlKsLE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~ 113 (155)
T 2efr_A 34 EERAELSEGKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDE 113 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444544444444333 3455556666666666666554 4445555555555555554
Q ss_pred HH
Q 010551 485 ME 486 (507)
Q Consensus 485 ~~ 486 (507)
+.
T Consensus 114 L~ 115 (155)
T 2efr_A 114 LY 115 (155)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 246
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=90.83 E-value=1.3 Score=44.51 Aligned_cols=24 Identities=21% Similarity=0.372 Sum_probs=10.4
Q ss_pred hhhHHHHHHhhccchhHHHhHHHH
Q 010551 413 SRFREKIDEVNSTHSELSKELSSV 436 (507)
Q Consensus 413 ~~l~~~l~~~~~~~~e~~~el~~~ 436 (507)
.++.+.+.+.++..++.++++++.
T Consensus 370 ~~le~~~~~~~~~~~~~~~~~~~~ 393 (487)
T 3oja_A 370 KALDEQVSNGRRAHAELDGTLQQA 393 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhhHHHh
Confidence 334444444444444444444433
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.80 E-value=9.9 Score=34.99 Aligned_cols=208 Identities=9% Similarity=-0.017 Sum_probs=101.6
Q ss_pred CCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-CC
Q 010551 24 RPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GT 101 (507)
Q Consensus 24 ~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~ 101 (507)
.|.+...+..++- ++.||+.--. ...++.||+... ........ ..-++++.. ++
T Consensus 28 ~p~~~~pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~-~~~~~~~~------------------~~p~gia~~~dG 83 (306)
T 2p4o_A 28 FPVNTFLENLASAPDGTIFVTNHE-----VGEIVSITPDGN-QQIHATVE------------------GKVSGLAFTSNG 83 (306)
T ss_dssp ECTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTTCC-EEEEEECS------------------SEEEEEEECTTS
T ss_pred CCCCCCcceEEECCCCCEEEEeCC-----CCeEEEECCCCc-eEEEEeCC------------------CCceeEEEcCCC
Confidence 3444455555543 5678887531 246899998764 22221111 112333333 56
Q ss_pred EEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCCcE
Q 010551 102 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTW 180 (507)
Q Consensus 102 ~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W 180 (507)
+||+...... ...++.||+.+++.+.+.. .+..+.....+.. ++.+|+.-. ..+.++++|+.+..-
T Consensus 84 ~l~vad~~~~----~~~v~~~d~~~g~~~~~~~---~~~~~~~~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 84 DLVATGWNAD----SIPVVSLVKSDGTVETLLT---LPDAIFLNGITPLSDTQYLTADS------YRGAIWLIDVVQPSG 150 (306)
T ss_dssp CEEEEEECTT----SCEEEEEECTTSCEEEEEE---CTTCSCEEEEEESSSSEEEEEET------TTTEEEEEETTTTEE
T ss_pred cEEEEeccCC----cceEEEEcCCCCeEEEEEe---CCCccccCcccccCCCcEEEEEC------CCCeEEEEeCCCCcE
Confidence 7887653211 1248899999998877652 2333333333322 446666432 134799999876532
Q ss_pred EE--eccCCC--CC-CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC-CcEEecccCCCCCCCCCccEEEEE-C
Q 010551 181 DA--VEVTQT--PP-APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITI-D 253 (507)
Q Consensus 181 ~~--~~~~~~--~p-~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~-~ 253 (507)
.. ...... .+ ........+..+++.||+.-- ..+.+++|++.. +........... .....+++- +
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~d 222 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVE 222 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTT
T ss_pred eEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCC
Confidence 11 111000 11 111111222445667888532 235799999875 322111100011 111233333 4
Q ss_pred CeEEEEeccCCCCCcceEEEEECCCCcEE
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 282 (507)
+++||.-.. .+.+.+||+. ....
T Consensus 223 G~l~va~~~-----~~~V~~~~~~-G~~~ 245 (306)
T 2p4o_A 223 GNLYGATHI-----YNSVVRIAPD-RSTT 245 (306)
T ss_dssp CCEEEECBT-----TCCEEEECTT-CCEE
T ss_pred CCEEEEeCC-----CCeEEEECCC-CCEE
Confidence 678877432 2358889876 4443
No 248
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=90.74 E-value=23 Score=39.10 Aligned_cols=113 Identities=8% Similarity=-0.035 Sum_probs=53.6
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCC-CCccCCceEEEEccCCceeeeccccccCCCccccC
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSR-NGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDS 82 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~-~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 82 (507)
++|++|+....-.++.. .+. .....+..-+++.++++... .......++++|..++.-..+......
T Consensus 34 ~l~~~~~~gg~~~~lt~---~~~-~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~-------- 101 (1045)
T 1k32_A 34 DLWEHDLKSGSTRKIVS---NLG-VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK-------- 101 (1045)
T ss_dssp EEEEEETTTCCEEEEEC---SSS-EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE--------
T ss_pred cEEEEECCCCcEEEeee---CCC-cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCc--------
Confidence 56788887777666652 111 11111111245444444321 001124689999988765444322100
Q ss_pred CCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEEEe
Q 010551 83 GLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 132 (507)
Q Consensus 83 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 132 (507)
.-..+.....+.+ ++++++.++..........+|.+|+.++.-..+
T Consensus 102 ----~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l 149 (1045)
T 1k32_A 102 ----STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL 149 (1045)
T ss_dssp ----EETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC
T ss_pred ----ccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEe
Confidence 0000111123333 455655555433222345688888877765544
No 249
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=90.71 E-value=5 Score=31.41 Aligned_cols=34 Identities=12% Similarity=0.293 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHH
Q 010551 448 FKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAF 481 (507)
Q Consensus 448 ~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~ 481 (507)
..+|..+.-+++.+...- +||.+++-+..++.-+
T Consensus 65 ~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FL 102 (119)
T 3ol1_A 65 EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFL 102 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555544433 6777777777777644
No 250
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.60 E-value=4.8 Score=37.10 Aligned_cols=165 Identities=9% Similarity=-0.007 Sum_probs=79.2
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEE----eccCC-
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLIL----GGHYK- 111 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~----GG~~~- 111 (507)
++.||+.... ...+..||+. ++...+..... ..+..+....++.-++.||+. |-...
T Consensus 96 dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 96 QQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYA------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECEET------------TEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred CCCEEEEECC-----CCEEEEECCC-CCEEEEEeccC------------CCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 5667765321 1358888886 66655532211 001111222222336778874 43211
Q ss_pred ------CCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CC-EEEEEcCCCCCCCccCcEEEEECCCCcEEEe
Q 010551 112 ------KSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAV 183 (507)
Q Consensus 112 ------~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~ 183 (507)
.......+++||+.+++.+.+. ....| ..++.. ++ .||+...... ....+.+++||+........
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p-----~gl~~spdg~~lyv~~~~~~-~~~~~~i~~~~~~~~~l~~~ 230 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP-----NGLAFSPDEQTLYVSQTPEQ-GHGSVEITAFAWRDGALHDR 230 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE-----EEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEE
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe-cCCCC-----cceEEcCCCCEEEEEecCCc-CCCCCEEEEEEecCCCccCC
Confidence 0112457999999988887664 11111 122222 33 5776543211 11135799999876543221
Q ss_pred ccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEec
Q 010551 184 EVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 184 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
......+ ...-.+++.-.++.||+..+ +.|++||+.......+
T Consensus 231 ~~~~~~~-~~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 231 RHFASVP-DGLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp EEEECCS-SSCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEEEE
T ss_pred eEEEECC-CCCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEEEE
Confidence 1110111 11112344444555776432 3599999976555444
No 251
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=90.59 E-value=1.5 Score=32.12 Aligned_cols=30 Identities=10% Similarity=0.223 Sum_probs=13.9
Q ss_pred HHHHHHHHhhhhHHHHhhhhhhHHHHHHhh
Q 010551 394 IKEDKRVLELSLTEVRTENSRFREKIDEVN 423 (507)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 423 (507)
|+......++.+.....++.+|++.+...+
T Consensus 7 L~~~L~~aEeaL~~kq~~id~lke~~~q~~ 36 (94)
T 3jsv_C 7 LRQQLQQAEEALVAKQELIDKLKEEAEQHK 36 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 344444444444444445555555444444
No 252
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=90.58 E-value=1.5 Score=31.14 Aligned_cols=17 Identities=6% Similarity=-0.009 Sum_probs=6.8
Q ss_pred HHHHHhhHHHhhhhhhh
Q 010551 433 LSSVQGQLVAERSRCFK 449 (507)
Q Consensus 433 l~~~~~~~~~~~~~~~~ 449 (507)
|..++..+...+.++++
T Consensus 33 Ls~vr~~ni~~eskL~e 49 (81)
T 1wt6_A 33 MEAIRTDNQNFASQLRE 49 (81)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444433333
No 253
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.58 E-value=11 Score=35.19 Aligned_cols=216 Identities=8% Similarity=0.056 Sum_probs=105.3
Q ss_pred CceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEcc-CCceeeeccccccCCCccccCCCcCCCCCc
Q 010551 13 DLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLR-SLAWSNLRLETELDADKTEDSGLLEVLPPM 91 (507)
Q Consensus 13 ~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r 91 (507)
..|+.+......+. ..-.++++.++.+|+.|.. ..++. ..+ -.+|+.+...... | ..
T Consensus 66 ~tW~~~~~~~~~~~-~~~~~i~~~~~~~~~~g~~------g~i~~-S~DgG~tW~~~~~~~~~-------------~-~~ 123 (327)
T 2xbg_A 66 QTWEPRTLVLDHSD-YRFNSVSFQGNEGWIVGEP------PIMLH-TTDGGQSWSQIPLDPKL-------------P-GS 123 (327)
T ss_dssp SSCEECCCCCSCCC-CEEEEEEEETTEEEEEEET------TEEEE-ESSTTSSCEECCCCTTC-------------S-SC
T ss_pred CCCeECCCCCCCCC-ccEEEEEecCCeEEEEECC------CeEEE-ECCCCCCceECccccCC-------------C-CC
Confidence 47988863211111 1223334457788887631 12333 333 3589887643210 1 11
Q ss_pred cceeEEE-ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCc
Q 010551 92 SDHCMVK-WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 92 ~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~ 169 (507)
.+.++. -++.+|+.|.. . .+++-.-.-.+|+.+.. +.....++++.. ++.+|++|-. ..
T Consensus 124 -~~~i~~~~~~~~~~~~~~---g----~v~~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-------G~ 184 (327)
T 2xbg_A 124 -PRLIKALGNGSAEMITNV---G----AIYRTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-------GS 184 (327)
T ss_dssp -EEEEEEEETTEEEEEETT---C----CEEEESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-------SS
T ss_pred -eEEEEEECCCCEEEEeCC---c----cEEEEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-------Cc
Confidence 133333 36788887742 1 24443323557999863 112222333333 3466665532 13
Q ss_pred EEEEECC-CCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECC-CCcEEecccCCCCCCCCCcc
Q 010551 170 VHFLDLE-TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 170 ~~~~d~~-t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~ 247 (507)
+++-+-. -..|+.+.. +.+...+.++...++.+|+.+..+ .+++.+.. -.+|+.+.. +..+.....+
T Consensus 185 ~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~G------~~~~s~~D~G~tW~~~~~-~~~~~~~~~~ 253 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNGG------KIAFSDPDNSENWGELLS-PLRRNSVGFL 253 (327)
T ss_dssp EEEEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEETTT------EEEEEETTEEEEECCCBC-TTSSCCSCEE
T ss_pred EEEEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEeCCc------eEEEecCCCCCeeEeccC-CcccCCcceE
Confidence 5544322 578998853 334444555554566688776421 24444323 457887532 1122222233
Q ss_pred EEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEEecc
Q 010551 248 AGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 286 (507)
Q Consensus 248 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~ 286 (507)
+++.. ++.+|++|+. + .+++-.-...+|+.+..
T Consensus 254 ~v~~~~~~~~~~~g~~-g-----~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 254 DLAYRTPNEVWLAGGA-G-----ALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp EEEESSSSCEEEEEST-T-----CEEEESSTTSSCEECGG
T ss_pred EEEecCCCEEEEEeCC-C-----eEEEeCCCCcccEEcCc
Confidence 43333 4578887652 1 24333333568998763
No 254
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.57 E-value=10 Score=34.88 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=17.9
Q ss_pred CCE-EEEEcCCCCCccCCceEEEEc-cCCceeee
Q 010551 37 DQK-LYIVGGSRNGRFLSDVQVFDL-RSLAWSNL 68 (507)
Q Consensus 37 ~~~-iyi~GG~~~~~~~~~~~~~d~-~~~~W~~~ 68 (507)
++. +++.|+.+ ..+.+||+ .++....+
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~ 95 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQAL 95 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEEC
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEec
Confidence 566 66667643 46899999 87765443
No 255
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=90.39 E-value=4.6 Score=39.44 Aligned_cols=73 Identities=11% Similarity=0.222 Sum_probs=36.0
Q ss_pred hHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhh-hhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 010551 415 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCF-KLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 415 l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~-~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~~ 487 (507)
.++.+.+.+.++.+++.|.+.+++.+...+...+ ++++..+++.+=.++..+-++++.++++.+.+..+++.+
T Consensus 32 Ye~~~ae~~a~n~~i~aeNeaikkrNa~aka~Ye~~l~kY~~dlakY~~~~AeY~~kl~aYe~~~~~~~k~lae 105 (497)
T 3iox_A 32 YEAAVAANNAANAALTAENTAIKKRNADAKADYEAKLAKYQADLAKYQKDLADYPVKLKAYEDEQTSIKAALAE 105 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555555555444322 233333333222222335555666666666666666654
No 256
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=90.35 E-value=14 Score=36.08 Aligned_cols=70 Identities=9% Similarity=0.056 Sum_probs=39.7
Q ss_pred CCeEEEEeccC----CCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCce-EEEEEccCCCCcCceEEE
Q 010551 253 DENWYIVGGGD----NNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEH-HLVAFGGYNGKYNNEVFV 327 (507)
Q Consensus 253 ~~~l~v~GG~~----~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~ 327 (507)
++++||.-... .....+++.++|+.+.+-..--.++. .-....+..++. .+|+.... .+++.+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~--------~P~gia~spDg~~~lyv~n~~----s~~VsV 397 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH--------EIDSINVSQDAEPLLYALSAG----TQTLHI 397 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--------EECEEEECCSSSCEEEEEETT----TTEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC--------CcCeEEEccCCCEEEEEEcCC----CCeEEE
Confidence 46888874311 11235689999998876432111211 122333444444 77776532 578999
Q ss_pred EECCCCC
Q 010551 328 MRLKPRD 334 (507)
Q Consensus 328 ~~~~~~~ 334 (507)
+|..+..
T Consensus 398 ID~~t~k 404 (426)
T 3c75_H 398 YDAATGE 404 (426)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9987664
No 257
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=90.30 E-value=1.2 Score=37.53 Aligned_cols=15 Identities=27% Similarity=0.142 Sum_probs=6.1
Q ss_pred HHHhHHHHHhhHHHh
Q 010551 429 LSKELSSVQGQLVAE 443 (507)
Q Consensus 429 ~~~el~~~~~~~~~~ 443 (507)
+++++...+.+++.+
T Consensus 90 Lr~ql~akr~EL~aL 104 (175)
T 3lay_A 90 LRQQLISKRYEYNAL 104 (175)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344444444433
No 258
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.30 E-value=10 Score=34.41 Aligned_cols=187 Identities=8% Similarity=0.065 Sum_probs=93.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCc--eeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~ 114 (507)
.+.+++.|..+ ..++++|+.+++ |+.-.... ....+..+.-++++|+. +
T Consensus 4 ~~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~-----------------~~~~~~~~~pdG~ilvs-~------ 54 (276)
T 3no2_A 4 PQHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKG-----------------WECNSVAATKAGEILFS-Y------ 54 (276)
T ss_dssp CCEEEEECTTC-----SEEEEEETTTTEEEEEEECCTT-----------------CCCCEEEECTTSCEEEE-C------
T ss_pred CCcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCcc-----------------CCCcCeEECCCCCEEEe-C------
Confidence 46777777533 568999998875 55432110 12223333347778873 2
Q ss_pred CcceEEEEECCCCc--EEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECCCC-cEEEeccCC-CC
Q 010551 115 DSMIVRFIDLETNL--CGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQ-TP 189 (507)
Q Consensus 115 ~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~t~-~W~~~~~~~-~~ 189 (507)
.+.++.||+ +++ |+-.. +.....+++... ++.+++..+.+ ...++.+|+... .|+.....+ ..
T Consensus 55 -~~~V~~~d~-~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 55 -SKGAKMITR-DGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIER 122 (276)
T ss_dssp -BSEEEEECT-TSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSS
T ss_pred -CCCEEEECC-CCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCc
Confidence 235999999 564 65432 111122333333 45555543321 235788887433 244321111 01
Q ss_pred CCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc--EEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCC
Q 010551 190 PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNN 266 (507)
Q Consensus 190 p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~ 266 (507)
+.... +.+....++.+++.... .+.+..||+. ++ |+.-. +. ..+++..+ ++.++|++..+
T Consensus 123 ~~~~~-~~v~~~~~G~~lv~~~~-----~~~v~~~d~~-G~~~w~~~~--~~-----~~~~~~~~~~g~~~v~~~~~--- 185 (276)
T 3no2_A 123 PHAQF-RQINKNKKGNYLVPLFA-----TSEVREIAPN-GQLLNSVKL--SG-----TPFSSAFLDNGDCLVACGDA--- 185 (276)
T ss_dssp GGGSC-SCCEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEEEC--SS-----CCCEEEECTTSCEEEECBTT---
T ss_pred ccccc-cCceECCCCCEEEEecC-----CCEEEEECCC-CCEEEEEEC--CC-----CccceeEcCCCCEEEEeCCC---
Confidence 11111 12233334435554332 2468899987 54 55421 11 12334444 56777775532
Q ss_pred CcceEEEEECCCCc--EEE
Q 010551 267 GCQETIVLNMTKLA--WSI 283 (507)
Q Consensus 267 ~~~~~~~~d~~~~~--W~~ 283 (507)
..++.||+.+++ |+.
T Consensus 186 --~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 186 --HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp --SEEEEECTTTCCEEEEE
T ss_pred --CeEEEEeCcCCcEEEEe
Confidence 258899998654 664
No 259
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=90.29 E-value=1.1 Score=35.93 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=13.0
Q ss_pred hccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHH
Q 010551 423 NSTHSELSKELSSVQGQLVAERSRCFKLEAQIAEL 457 (507)
Q Consensus 423 ~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~ 457 (507)
+.++.+.++.++..+.+++.++.....|+..+.+.
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~ 71 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEET 71 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 33344444444444444444444334444444333
No 260
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.27 E-value=10 Score=34.20 Aligned_cols=235 Identities=8% Similarity=0.038 Sum_probs=114.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.||+.+.. ...+.+||+.......+...... ......-++++.. +++||+.+...
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~------------~~~~~~p~~i~~~~~~g~l~v~~~~~---- 98 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKR------------DSQLLYPNRVAVVRNSGDIIVTERSP---- 98 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSS------------TTCBSSEEEEEEETTTTEEEEEECGG----
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCCC------------cccccCceEEEEEcCCCeEEEEcCCC----
Confidence 5678887542 24688999875433333321100 0001112334442 67898876421
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
...+.+||.....-..+.. +. ......+.+ ++.+|+.... .+.+++||+.......+...+..
T Consensus 99 -~~~i~~~d~~g~~~~~~~~----~~-~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~--- 163 (286)
T 1q7f_A 99 -THQIQIYNQYGQFVRKFGA----TI-LQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHL--- 163 (286)
T ss_dssp -GCEEEEECTTSCEEEEECT----TT-CSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTC---
T ss_pred -CCEEEEECCCCcEEEEecC----cc-CCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCcc---
Confidence 2358899954443333321 11 111122333 4578876542 24689999766544444321111
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeEEEEeccCCCCCcceE
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQET 271 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~ 271 (507)
..-.+++.-.++.+|+.+.. .+.+++||+.......+...+... ...+++.. ++++||....++ ..+
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~~G~l~v~~~~~~----~~i 231 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITN---YPIGVGINSNGEILIADNHNN----FNL 231 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSC---SEEEEEECTTCCEEEEECSSS----CEE
T ss_pred CCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCccC---CCcEEEECCCCCEEEEeCCCC----EEE
Confidence 11233444445778886542 246999998665444432111111 11233332 457888764321 158
Q ss_pred EEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 272 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 272 ~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
.+||.....-..+..... ......+.+..+..||+... .+.+.+|++.
T Consensus 232 ~~~~~~g~~~~~~~~~~~-------~~~~~~i~~~~~g~l~vs~~-----~~~v~v~~~~ 279 (286)
T 1q7f_A 232 TIFTQDGQLISALESKVK-------HAQCFDVALMDDGSVVLASK-----DYRLYIYRYV 279 (286)
T ss_dssp EEECTTSCEEEEEEESSC-------CSCEEEEEEETTTEEEEEET-----TTEEEEEECS
T ss_pred EEECCCCCEEEEEcccCC-------CCcceeEEECCCCcEEEECC-----CCeEEEEEcc
Confidence 889876654444432111 11122333444446777632 2567777654
No 261
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.10 E-value=11 Score=34.36 Aligned_cols=106 Identities=11% Similarity=0.087 Sum_probs=53.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE----CCEEEEEeccCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~ 112 (507)
++..++.|+.+ ..+.+||+.....+.+..... + ......+.+ ++.+++.|+.+
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~g-------------H---~~~V~~v~~s~~~~g~~l~s~s~D-- 76 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTG-------------H---EGPVWRVDWAHPKFGTILASCSYD-- 76 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECC-------------C---SSCEEEEEECCGGGCSEEEEEETT--
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEcc-------------c---cCCeEEEEecCCCcCCEEEEEcCC--
Confidence 45666777644 358888887654433322210 0 011122332 14566666643
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEEC----CEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 113 SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~----~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
..+.++|+.++.|..+... ........++.+. +.+++.|+.++ .+.++|+.+.
T Consensus 77 ----~~v~iWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d~------~v~~wd~~~~ 133 (297)
T 2pm7_B 77 ----GKVMIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSDG------KVSVVEFKEN 133 (297)
T ss_dssp ----TEEEEEEBSSSCBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEEBCSS
T ss_pred ----CEEEEEEcCCCceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECCC------cEEEEEecCC
Confidence 2488889888876544321 1111122233332 45666666543 4777777654
No 262
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.04 E-value=18 Score=36.64 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=56.7
Q ss_pred EEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCC-CCceEEEEcC-CEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 154 LIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR-YDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 154 iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
+++.|+.+ +.+.+||+.+.+-...-. ...... .-.+++...+ +.+++.|+.+ ..+.+||+.+++.
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~ 241 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCE
T ss_pred EEEEEeCC------CcEEEEeCCCcceeeeec--ccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCE
Confidence 67777654 358889987765433211 000000 1223333344 5566667654 3689999988765
Q ss_pred EecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEE
Q 010551 232 SQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 232 ~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 282 (507)
...-..........-.++...++..++.|+.++ .+.+||+.+..-.
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADA-----TIRVWDVTTSKCV 287 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEESSSSEEEEEETTS-----EEEEEETTTTEEE
T ss_pred eEEecccccccCCceEEEEEcCCCEEEEEcCCC-----cEEEEECCCCcEE
Confidence 542100000111111122222666777776432 4788998876543
No 263
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.03 E-value=11 Score=34.40 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=33.8
Q ss_pred CEEEEEeccCCCCCCcceEEEEECCCC-------cEEEeecCCCCCCCCcCcEEEEE--C--CEEEEEcCCCCCCCccCc
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDLETN-------LCGVMETSGKVPVTRGGHSVTLV--G--SRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~~t~-------~W~~~~~~g~~p~~r~~~~~~~~--~--~~iy~~GG~~~~~~~~n~ 169 (507)
+.+++.|+.+. .+.+||+.++ .|..+... ........++.+ + +.+++.|+.+ ..
T Consensus 71 ~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~ 135 (351)
T 3f3f_A 71 GRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGND------GI 135 (351)
T ss_dssp CSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------CE
T ss_pred CCEEEEEcCCC------eEEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCC------Cc
Confidence 56777776542 3777777664 34444321 111122223333 2 5566677654 35
Q ss_pred EEEEECCCCc
Q 010551 170 VHFLDLETMT 179 (507)
Q Consensus 170 ~~~~d~~t~~ 179 (507)
+.+||+.+.+
T Consensus 136 v~iwd~~~~~ 145 (351)
T 3f3f_A 136 LRLYDALEPS 145 (351)
T ss_dssp EEEEECSSTT
T ss_pred EEEecCCChH
Confidence 8888886643
No 264
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.83 E-value=12 Score=34.46 Aligned_cols=111 Identities=13% Similarity=0.079 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE----CCEEEEEeccCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKK 112 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~ 112 (507)
++.+++.|+.+ ..+.++|+.++....+..... + ......+.+ ++.+++.|+.+.
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~g-------------H---~~~V~~v~~~~~~~~~~l~s~s~D~- 81 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRG-------------H---EGPVWQVAWAHPMYGNILASCSYDR- 81 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEEC-------------C---SSCEEEEEECCGGGSSCEEEEETTS-
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcC-------------C---CccEEEEEeCCCCCCCEEEEEECCC-
Confidence 45666777643 358888988765433332210 0 111122332 245666666432
Q ss_pred CCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--C--CEEEEEcCCCCCCCccCcEEEEECCCC-cEEEe
Q 010551 113 SSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAV 183 (507)
Q Consensus 113 ~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~iy~~GG~~~~~~~~n~~~~~d~~t~-~W~~~ 183 (507)
.+.+||+.++.|...... ........++.+ + +.+++.|+.+. .+.++|+.+. .|...
T Consensus 82 -----~v~iWd~~~~~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 82 -----KVIIWREENGTWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEGQWEVK 143 (316)
T ss_dssp -----CEEEECCSSSCCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSSCEEEC
T ss_pred -----EEEEEECCCCcceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCCCccee
Confidence 388889988877554321 111111222333 2 45677777653 4777787665 46543
No 265
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.82 E-value=14 Score=35.08 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=38.5
Q ss_pred cCCEEEEEcCCC-----CCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEE
Q 010551 202 ANRYLIVFGGCS-----HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVL 274 (507)
Q Consensus 202 ~~~~l~v~GG~~-----~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~ 274 (507)
+++.+|+....+ .....+.++++|+.+.+-..- .+.+. .++++.. +..+|+.++ +.+.+|
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~-----i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~ 330 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR-----IPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVY 330 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE-----EECTT-CCEEEEETTTTEEEEECS-------SCEEEE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEE-----EecCC-eeEEEECCCCCEEEEeCC-------CeEEEE
Confidence 347888875411 112346899999998875432 12222 3444444 345665432 578899
Q ss_pred ECCCC
Q 010551 275 NMTKL 279 (507)
Q Consensus 275 d~~~~ 279 (507)
|..+.
T Consensus 331 D~~t~ 335 (361)
T 2oiz_A 331 DISQP 335 (361)
T ss_dssp ECSSS
T ss_pred ECCCC
Confidence 99887
No 266
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.78 E-value=8.3 Score=33.18 Aligned_cols=152 Identities=11% Similarity=0.151 Sum_probs=78.2
Q ss_pred EEEECCEEEEEcCCCCCccCCceEEEEccCCc--e-eeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEecc
Q 010551 33 AAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA--W-SNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGH 109 (507)
Q Consensus 33 ~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~--W-~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 109 (507)
++.+++.+|+|-| +.+|.++..... . ..+... ....|.....+....++++|+|-|.
T Consensus 11 ~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~-------------w~glP~~iDAa~~~~~g~~yfFkg~ 70 (196)
T 3c7x_A 11 VAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQF-------------WRGLPASINTAYERKDGKFVFFKGD 70 (196)
T ss_dssp EEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHH-------------STTCCSSCCEEEECTTSCEEEEETT
T ss_pred EEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHh-------------ccCCCCCccEEEEeCCCcEEEecCC
Confidence 3457899999988 347777532100 0 111110 1122333333332347889999763
Q ss_pred CCCCCCcceEEEEECCCCc---EEEeecCC-CCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEE-
Q 010551 110 YKKSSDSMIVRFIDLETNL---CGVMETSG-KVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDA- 182 (507)
Q Consensus 110 ~~~~~~~~~~~~yd~~t~~---W~~~~~~g-~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~- 182 (507)
.+|+|+..+.. =..+...+ .+|..... ++... ++++|+|-|. ..++||..+.+-..
T Consensus 71 --------~yw~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG~--------~yw~yd~~~~~v~~g 133 (196)
T 3c7x_A 71 --------KHWVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRGN--------KYYRFNEELRAVDSE 133 (196)
T ss_dssp --------EEEEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEETT--------EEEEEETTTTEECTT
T ss_pred --------EEEEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEECC--------EEEEEeCCcccccCC
Confidence 37888754211 11222111 13322222 22322 5799999774 47899987653211
Q ss_pred ----eccCCCCCCCCCCceEEEEcCC-EEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 183 ----VEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 183 ----~~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
+..-..+| ..-.++....++ ++|+|-| +..|+||..+..
T Consensus 134 yPk~i~~~~gip--~~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 134 YPKNIKVWEGIP--ESPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp CSEEGGGSBTCC--SSCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CCccHHHCCCcC--CCcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 11000122 223344444444 8999977 478999987765
No 267
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=89.72 E-value=14 Score=35.08 Aligned_cols=112 Identities=12% Similarity=0.010 Sum_probs=55.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCC--CCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEEC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV--PVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~--p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~ 175 (507)
++..++.|+.+. .+.+||+.++.-...-..... ........++.+ ++.+++.|+.+ ..+.+||+
T Consensus 260 ~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d------g~i~vwd~ 327 (380)
T 3iz6_a 260 DGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN------GDCYVWDT 327 (380)
T ss_dssp TSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT------SCEEEEET
T ss_pred CCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC------CCEEEEEC
Confidence 456677776543 388999998864433211010 011111223333 55666667654 35899998
Q ss_pred CCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 176 ETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 176 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
.+..-......-.......-.+++...++.+++.|+.++ .+.+++++.
T Consensus 328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 776643221100000111112333334555777787653 466666654
No 268
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=89.51 E-value=19 Score=36.25 Aligned_cols=146 Identities=8% Similarity=0.013 Sum_probs=67.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
+++.++.|+.+ ..+.+||.....-..+. . . .....++.+ +++.++.++.+ ..+..||...
T Consensus 396 dg~~l~~~~~d------~~v~~~~~~~~~~~~~~---~-~--~~~v~~~~~s~d~~~l~~~~~d------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDD------KTVKLWNRNGQLLQTLT---G-H--SSSVWGVAFSPDDQTIASASDD------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETT------SEEEEECTTCCEEEEEE---C-C--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTS
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCEEEEec---C-C--CCCeEEEEECCCCCEEEEEcCC------CEEEEEECCC
Confidence 45555666543 24777875443322222 1 1 111222233 45666666654 2478888765
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeE
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENW 256 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l 256 (507)
..-..+... ...-.+++...++.+++.|+.+ ..+.+||.....-..+. +. ...-.+++.. ++++
T Consensus 458 ~~~~~~~~~-----~~~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~--~h---~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 458 QLLQTLTGH-----SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLT--GH---SSSVRGVAFSPDGQT 522 (577)
T ss_dssp CEEEEEECC-----SSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEE--CC---SSCEEEEEECTTSSC
T ss_pred CEEEEEcCC-----CCCEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEe--CC---CCCEEEEEEcCCCCE
Confidence 444443321 1112233334455577766643 25777886443322221 10 0011122222 4566
Q ss_pred EEEeccCCCCCcceEEEEECCCCcEEE
Q 010551 257 YIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 257 ~v~GG~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
++.|+.++ .+.+||........
T Consensus 523 l~s~~~dg-----~v~lwd~~~~~~~~ 544 (577)
T 2ymu_A 523 IASASDDK-----TVKLWNRNGQLLQT 544 (577)
T ss_dssp EEEEETTS-----EEEEECTTSCEEEE
T ss_pred EEEEECcC-----EEEEEeCCCCEEEE
Confidence 66666432 46778865544333
No 269
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.44 E-value=16 Score=35.23 Aligned_cols=70 Identities=7% Similarity=0.059 Sum_probs=39.5
Q ss_pred CCeEEEEecc----CCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEccCCCCcCceEEE
Q 010551 253 DENWYIVGGG----DNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKYNNEVFV 327 (507)
Q Consensus 253 ~~~l~v~GG~----~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~ 327 (507)
++++||.-+. ......+.++++|+.+.+-..--.+.. ......+..+ ...||+.-+ ..+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--------~~~~lavs~D~~~~ly~tn~----~~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--------EIDSINVSQDEKPLLYALST----GDKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--------EECEEEECSSSSCEEEEEET----TTTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--------CcceEEECCCCCeEEEEEcC----CCCeEEE
Confidence 5789987431 122235789999999987544222211 1112223333 347777533 2578899
Q ss_pred EECCCCC
Q 010551 328 MRLKPRD 334 (507)
Q Consensus 328 ~~~~~~~ 334 (507)
+|..+..
T Consensus 359 iD~~t~k 365 (386)
T 3sjl_D 359 HDAESGE 365 (386)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9987654
No 270
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=89.35 E-value=10 Score=32.94 Aligned_cols=153 Identities=11% Similarity=0.060 Sum_probs=81.1
Q ss_pred eEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecC---CCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCc
Q 010551 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 95 ~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~ 169 (507)
+++.+++.+|+|=|.. +|.++.....+...... ..+|.. .. ++... ++++|+|-|. .
T Consensus 28 Ai~~~~g~~y~Fkg~~--------~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG~--------~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKDRF--------FWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRGR--------K 89 (207)
T ss_dssp EEEEETTEEEEEETTE--------EEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEETT--------E
T ss_pred EEEeCCCcEEEEECCE--------EEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEccC--------E
Confidence 3445789999996632 77777654443322211 123422 21 23333 5799999874 3
Q ss_pred EEEEECCCCcE---EEeccCCCCCCC-CCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-----ccc-CC
Q 010551 170 VHFLDLETMTW---DAVEVTQTPPAP-RYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEI-KG 238 (507)
Q Consensus 170 ~~~~d~~t~~W---~~~~~~~~~p~~-r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~-~~ 238 (507)
+|+|+-.+..- ..+...| +|.. ..--++... +++++|+|-| +..|+||..+++-.. +.. -.
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp EEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHST
T ss_pred EEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCC
Confidence 66675322111 1222112 2321 122233333 3578999988 478999987654321 000 01
Q ss_pred CCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEE
Q 010551 239 DLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 239 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 282 (507)
.+| ..-.++...++.+|+|-| +..|.||..+..-.
T Consensus 162 Gip--~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 162 GIG--DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIV 196 (207)
T ss_dssp TSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCC--CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEEe
Confidence 122 223344556889999966 35788988776543
No 271
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=89.33 E-value=5.3 Score=31.74 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=43.4
Q ss_pred HhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH-------HHHHHHHHHHHhHHHHHHHHHHh
Q 010551 421 EVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ-------TIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 421 ~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~-------~le~e~~~~~~~~~~~~~~~~~~ 488 (507)
..-.+-++...-.+.--..+..-++.+..++..+.+.+.+|.+++ +++.+++++..+..+..+.++.+
T Consensus 52 tal~eAq~Atd~ye~ai~n~~sA~~~~d~lekKl~~aq~kL~~L~P~~P~Yak~~a~~~q~~~d~~~~~~~~~kA 126 (158)
T 3tul_A 52 TALGEAQEATDLYEASIKKTDTAKSVYDAATKKLTQAQNKLQSLDPADPGYAQAEAAVEQAGKEATEAKEALDKA 126 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444555557777777777888888888776 77788888888777666665544
No 272
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=89.29 E-value=5.4 Score=30.52 Aligned_cols=11 Identities=9% Similarity=-0.016 Sum_probs=4.3
Q ss_pred HHHHHHHHHHh
Q 010551 392 DAIKEDKRVLE 402 (507)
Q Consensus 392 ~~l~~~~~~~~ 402 (507)
++|+...+++.
T Consensus 9 ~~lq~~~~ql~ 19 (112)
T 1x79_B 9 KKLQLMLRQAN 19 (112)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444433
No 273
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=89.19 E-value=4.2 Score=32.84 Aligned_cols=49 Identities=8% Similarity=0.051 Sum_probs=19.1
Q ss_pred hHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHh
Q 010551 415 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 415 l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
|+.++..++..+.+++.+++.....++.++....-++-++..++++++.
T Consensus 73 L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~k 121 (152)
T 3a7p_A 73 LQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSD 121 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333444444444444334333343333
No 274
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=89.15 E-value=6.2 Score=30.20 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=8.1
Q ss_pred hhhhhHHHHHHHHHHHHhHH
Q 010551 446 RCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 446 ~~~~~e~~~~e~~~~~~~~~ 465 (507)
.++.|..+++.-++.|+.++
T Consensus 46 qV~~L~~~~q~sE~~L~~Lq 65 (112)
T 1x79_B 46 QISALVLRAQASEILLEELQ 65 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444433
No 275
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=88.93 E-value=3.2 Score=28.99 Aligned_cols=20 Identities=10% Similarity=0.034 Sum_probs=8.5
Q ss_pred HHHHHHHHhHHHHHHHHHHh
Q 010551 469 NEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~~~~ 488 (507)
.++..+.+.+.....++.+.
T Consensus 42 ~Elk~~~e~Ld~KI~eL~el 61 (72)
T 3cve_A 42 SNLKTLLEILDGKIFELTEL 61 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHH
Confidence 34444444444444444333
No 276
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=88.67 E-value=1.8 Score=30.91 Aligned_cols=31 Identities=16% Similarity=0.403 Sum_probs=14.7
Q ss_pred hhhHHHHHHhhccchhHHHhHHHHHhhHHHh
Q 010551 413 SRFREKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 413 ~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~ 443 (507)
.++.+++++++..+.++++.++..+.+++.-
T Consensus 9 e~~~~klq~~E~rN~~Le~~v~~le~~Le~s 39 (79)
T 3cvf_A 9 EETQQKVQDLETRNAELEHQLRAMERSLEEA 39 (79)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3344445555555555555555444444433
No 277
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=88.61 E-value=8.4 Score=31.39 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=10.1
Q ss_pred HHHhhccchhHHHhHHHHHhhHHHh
Q 010551 419 IDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 419 l~~~~~~~~e~~~el~~~~~~~~~~ 443 (507)
+..+..++.....++.....++..+
T Consensus 46 ~~~l~~~~~~~~~e~~~L~~~l~~E 70 (154)
T 2ocy_A 46 YNTLKRELSDRDDEVKRLREDIAKE 70 (154)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3333333334444444444444443
No 278
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=88.48 E-value=4.9 Score=32.70 Aligned_cols=76 Identities=18% Similarity=0.298 Sum_probs=45.8
Q ss_pred hhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010551 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 411 ~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~~~ 486 (507)
+....+...++..+..++..+.+..+...+..-.++....+..+.+++.+++... .|+-.-+++.++-+..+.++.
T Consensus 60 qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nlKsLE~~eekas~rE~~yee~I~ 139 (147)
T 2b9c_A 60 QLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENEVA 139 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHH
Confidence 3333444444555555666666777777777778888888888888888877766 333333334444444444443
No 279
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=88.39 E-value=16 Score=33.88 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=56.2
Q ss_pred CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCC
Q 010551 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSD 115 (507)
Q Consensus 38 ~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~ 115 (507)
+.+++.|+.+ ..+.+||..+........... .......+.+ ++..++.|+.+
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~l~s~~~d----- 107 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQM----------------HTGPVLDVCWSDDGSKVFTASCD----- 107 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEE----------------CSSCEEEEEECTTSSEEEEEETT-----
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEecc----------------ccCCEEEEEECcCCCEEEEEcCC-----
Confidence 3778887744 358899988743332111110 0111222223 45555666543
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE----CCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
..+.+||..++....... . .....++.+ ++.+++.|+.++ .+.+||+.+.+
T Consensus 108 -g~v~iwd~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~ 162 (368)
T 3mmy_A 108 -KTAKMWDLSSNQAIQIAQ---H---DAPVKTIHWIKAPNYSCVMTGSWDK------TLKFWDTRSSN 162 (368)
T ss_dssp -SEEEEEETTTTEEEEEEE---C---SSCEEEEEEEECSSCEEEEEEETTS------EEEEECSSCSS
T ss_pred -CcEEEEEcCCCCceeecc---c---cCceEEEEEEeCCCCCEEEEccCCC------cEEEEECCCCc
Confidence 358899999887655431 1 111222222 457777777653 58899987764
No 280
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=88.14 E-value=2.9 Score=34.12 Aligned_cols=15 Identities=7% Similarity=0.071 Sum_probs=6.2
Q ss_pred HHHhHHHHHhhHHHh
Q 010551 429 LSKELSSVQGQLVAE 443 (507)
Q Consensus 429 ~~~el~~~~~~~~~~ 443 (507)
.++++..+..+++.+
T Consensus 77 aE~~~~~ie~ElEeL 91 (154)
T 2ocy_A 77 AEEEADKLNKEVEDL 91 (154)
T ss_dssp HHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333444444444444
No 281
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.12 E-value=16 Score=33.76 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=56.0
Q ss_pred CEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE---CCEEEEEeccCCCCC
Q 010551 38 QKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSS 114 (507)
Q Consensus 38 ~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~ 114 (507)
+.+++.|+.+ ..+.+||+.++.-...-... ......+.+ ++.+++.|+.+.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~~l~s~~~dg--- 138 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVGH------------------GNAINELKFHPRDPNLLLSVSKDH--- 138 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEESC------------------CSCEEEEEECSSCTTEEEEEETTS---
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecCC------------------CCcEEEEEECCCCCCEEEEEeCCC---
Confidence 4677777744 35889998876432221100 111222222 456777776532
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
.+.+||+.++.-..... ..........++.+ ++..++.|+.+ +.+.+||+.+.
T Consensus 139 ---~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~ 193 (366)
T 3k26_A 139 ---ALRLWNIQTDTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMD------HSLKLWRINSK 193 (366)
T ss_dssp ---CEEEEETTTTEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETT------SCEEEEESCSH
T ss_pred ---eEEEEEeecCeEEEEec--ccccccCceeEEEECCCCCEEEEecCC------CCEEEEECCCC
Confidence 38999998886544321 11112222333333 34566677654 35888998764
No 282
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=88.10 E-value=3.4 Score=43.44 Aligned_cols=61 Identities=8% Similarity=0.079 Sum_probs=31.9
Q ss_pred CCCCeEeeCCCCceEEeecCCCCCCc--cccceEEE-ECCEEEEEcCCCCC----ccCCceEEEEccCCce
Q 010551 2 DSGSWHLELPYDLWVTLPVSGARPSP--RYKHAAAV-FDQKLYIVGGSRNG----RFLSDVQVFDLRSLAW 65 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~p~~--r~~~~~~~-~~~~iyi~GG~~~~----~~~~~~~~~d~~~~~W 65 (507)
|..+|++|+..++-..+.. .+.. ..-.+.+. -+++.++++....+ .....++++|+.++..
T Consensus 35 d~~i~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILS---NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp TSCEEEEESSSCCEEEEEC---HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCcEEEEEc---cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 4567888888888766652 1100 00112222 24554444432111 1135789999988766
No 283
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.01 E-value=12 Score=32.11 Aligned_cols=155 Identities=14% Similarity=0.150 Sum_probs=78.8
Q ss_pred EEEECCEEEEEcCCCCCccCCceEEEEccCC--ceeeeccccccCCCccccCCCcCCCCCccceeEEE-ECCEEEEEecc
Q 010551 33 AAVFDQKLYIVGGSRNGRFLSDVQVFDLRSL--AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGH 109 (507)
Q Consensus 33 ~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~ 109 (507)
++.+++.+|+|=| +.+|.++.... .......... ....|.....+... .++++|+|-|.
T Consensus 12 i~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~-----------w~glP~~IDAa~~~~~~~~~yfFkG~ 73 (195)
T 1itv_A 12 IAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADK-----------WPALPRKLDSVFEEPLSKKLFFFSGR 73 (195)
T ss_dssp EEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHH-----------CTTSCSSCSEEEECTTTCCEEEEETT
T ss_pred EEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhc-----------cCCCCCCccEEEEECCCCeEEEEeCC
Confidence 4457999999988 34777766442 1211111000 11122223322222 16789999773
Q ss_pred CCCCCCcceEEEEECCCCcE-EEeecCCCCCCCCcCcEEEE--ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEE----
Q 010551 110 YKKSSDSMIVRFIDLETNLC-GVMETSGKVPVTRGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDA---- 182 (507)
Q Consensus 110 ~~~~~~~~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~--~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~---- 182 (507)
..|+|+..+..- +.+..-| +|......-++. .++++|+|-|. ..++||..+.+-..
T Consensus 74 --------~yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg~--------~ywr~d~~~~~~~~gyPr 136 (195)
T 1itv_A 74 --------QVWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSGR--------RLWRFDVKAQMVDPRSAS 136 (195)
T ss_dssp --------EEEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEETT--------EEEEEETTTTEECGGGCE
T ss_pred --------EEEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeCC--------EEEEEeCCcccccCCCcc
Confidence 388887553221 0111112 232111222233 25699999773 47899987654211
Q ss_pred -ec-cCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 183 -VE-VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 183 -~~-~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+. .=..+| ..-.++... ++.+|+|-| +..|+||..+..-.
T Consensus 137 ~i~~~w~Gvp--~~idaa~~~-~g~~Yffkg-------~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 137 EVDRMFPGVP--LDTHDVFQF-REKAYFCQD-------RFYWRVSSRSELNQ 178 (195)
T ss_dssp EHHHHSTTSC--SSCSEEEEE-TTEEEEEET-------TEEEEEECCTTCCE
T ss_pred ChhhcCCCCC--CCCCEEEEe-CCeEEEEeC-------CEEEEEECCccEEe
Confidence 10 000122 222344444 477999988 46899998776544
No 284
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=87.93 E-value=4.8 Score=31.49 Aligned_cols=13 Identities=15% Similarity=0.174 Sum_probs=5.3
Q ss_pred HHHhhHHHhhhhh
Q 010551 435 SVQGQLVAERSRC 447 (507)
Q Consensus 435 ~~~~~~~~~~~~~ 447 (507)
.++.++..+++.+
T Consensus 66 ~~E~di~~lrK~l 78 (119)
T 3ol1_A 66 EAENTLQSFRQDV 78 (119)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc
Confidence 3344444444433
No 285
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=87.74 E-value=17 Score=35.83 Aligned_cols=157 Identities=9% Similarity=-0.020 Sum_probs=78.4
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEE-ECCEEEEEeccC
Q 010551 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHY 110 (507)
Q Consensus 32 ~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~ 110 (507)
+++.+++.+|+|-| .-+|.++.....+....... ....++.....+... .++++|+|=|.
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~-----------~Wp~LP~~iDAa~~~~~~g~~~fFKg~- 327 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISV-----------FWPQLPNGLEAAYEFADRDEVRFFKGN- 327 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGG-----------TCTTSCSSCCEEEEEGGGTEEEEEETT-
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhH-----------hccCCCCCeeEEEEEcCCCeEEEEeCC-
Confidence 44557999999988 23555554433322211110 011122222222222 26899999664
Q ss_pred CCCCCcceEEEEECCC---CcEEEee-cCCCCCCCCcCc-EEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEE--
Q 010551 111 KKSSDSMIVRFIDLET---NLCGVME-TSGKVPVTRGGH-SVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-- 181 (507)
Q Consensus 111 ~~~~~~~~~~~yd~~t---~~W~~~~-~~g~~p~~r~~~-~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~-- 181 (507)
.+|+|+..+ +-=..+. ..| .|...... ++... ++++|+|-|. ..|+||..+.+-.
T Consensus 328 -------~~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~IDAA~~~~~~~k~yfFkG~--------~yw~yd~~~~~~~~g 391 (450)
T 1su3_A 328 -------KYWAVQGQNVLHGYPKDIYSSFG-FPRTVKHIDAALSEENTGKTYFFVAN--------KYWRYDEYKRSMDPG 391 (450)
T ss_dssp -------EEEEEETTEECTTCSEEHHHHHC-CCTTCCCCCEEEEETTTTEEEEEETT--------EEEEEETTTTEECSS
T ss_pred -------EEEEecCCcccCCCceeeehhhc-CCCCCCccceEEEEcCCCeEEEEeCC--------EEEEEeCCCccccCC
Confidence 278876432 1011111 112 22211122 33333 4799999873 5889987654321
Q ss_pred ---Eecc-CCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 182 ---AVEV-TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 182 ---~~~~-~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
.+.. -...| ... .++. ..++++|+|-| +..|+||..+..-..
T Consensus 392 YPk~I~~~fpgip-~~i-DAA~-~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 392 YPKMIAHDFPGIG-HKV-DAVF-MKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp CSEEHHHHSTTSC-SCC-SEEE-EETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCcchhhcCCCCC-CCc-cEEE-EcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 1110 00112 122 2333 34678999988 478999988776554
No 286
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=87.66 E-value=18 Score=33.66 Aligned_cols=191 Identities=14% Similarity=0.104 Sum_probs=95.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
++.+++.||.+ ..+.++|+.++.-...-..... ... ...| . ..++..++.+.+|-. .
T Consensus 47 d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~~~~v-----~~~--~~~~--~--~~s~s~D~~i~~w~~-------~ 103 (343)
T 3lrv_A 47 DKWVCMCRCED-----GALHFTQLKDSKTITTITTPNP-----RTG--GEHP--A--IISRGPCNRLLLLYP-------G 103 (343)
T ss_dssp EEEEEEEEEET-----TEEEEEEESSSSCEEEEEEECC-----CTT--CCCC--S--EEEECSTTEEEEEET-------T
T ss_pred CCCEEEEECCC-----CcEEEEECCCCcEEEEEecCCc-----eee--eeCC--c--eEEecCCCeEEEEEc-------c
Confidence 56677777744 3588888877653221111100 000 0011 1 222223556666643 2
Q ss_pred ceEEEEECCCCc-EEEeecCCCCCCCCcCcEEEEE----CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 117 MIVRFIDLETNL-CGVMETSGKVPVTRGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 117 ~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~----~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
..+..||..++. -..... +.. ....++.+ ++.+++.|+.++ .+.+||+.+.+-...... ..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~----~~~-~~v~~~~~~~~~~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~---~~ 169 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEV----DSA-NEIIYMYGHNEVNTEYFIWADNRG------TIGFQSYEDDSQYIVHSA---KS 169 (343)
T ss_dssp TEEEEEETTTCCEEEEEEC----CCS-SCEEEEECCC---CCEEEEEETTC------CEEEEESSSSCEEEEECC---CS
T ss_pred CceEEeecCCcceeEEeec----CCC-CCEEEEEcCCCCCCCEEEEEeCCC------cEEEEECCCCcEEEEEec---CC
Confidence 247778887776 333321 111 11122222 456677777653 589999988776443311 11
Q ss_pred CCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE--ecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCC
Q 010551 192 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS--QPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNG 267 (507)
Q Consensus 192 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~--~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~ 267 (507)
.....+++...++.+++.|+.+ ..+.+||+.++.-. .+. + . ....-..+.+ ++..++.|+ ++
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~~~~~--~--~-h~~~v~~l~fs~~g~~l~s~~-~~--- 235 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQASSRFP--V--D-EEAKIKEVKFADNGYWMVVEC-DQ--- 235 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCCEECC--C--C-TTSCEEEEEECTTSSEEEEEE-SS---
T ss_pred CCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCccEEe--c--c-CCCCEEEEEEeCCCCEEEEEe-CC---
Confidence 2123344445566677777754 36889999876532 111 1 0 1111122223 445666665 22
Q ss_pred cceEEEEECCCCc
Q 010551 268 CQETIVLNMTKLA 280 (507)
Q Consensus 268 ~~~~~~~d~~~~~ 280 (507)
.+.++|+.+..
T Consensus 236 --~v~iwd~~~~~ 246 (343)
T 3lrv_A 236 --TVVCFDLRKDV 246 (343)
T ss_dssp --BEEEEETTSST
T ss_pred --eEEEEEcCCCC
Confidence 57888987653
No 287
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.58 E-value=17 Score=33.37 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=33.6
Q ss_pred CCE-EEEEeccCCCCCCcceEEEEEC-CCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTK-LLILGGHYKKSSDSMIVRFIDL-ETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~-lyv~GG~~~~~~~~~~~~~yd~-~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++. +++.|+.+ ..+.+||+ .++....+. ..+....-.+++...+.+++.|+.+ +.+.+||+.+
T Consensus 67 ~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~---~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQ------GEILKVDLIGSPSFQALT---NNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETT------SCEEEECSSSSSSEEECB---SCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHH
T ss_pred CCCcEEEEEcCC------CeEEEEEeccCCceEecc---ccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccc
Confidence 566 66666643 24899999 888765443 1001111112222225555566654 3578888754
No 288
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=87.34 E-value=2.2 Score=31.35 Aligned_cols=15 Identities=7% Similarity=0.271 Sum_probs=6.1
Q ss_pred hHHHHHHhhccchhH
Q 010551 415 FREKIDEVNSTHSEL 429 (507)
Q Consensus 415 l~~~l~~~~~~~~e~ 429 (507)
|...|+..++-+...
T Consensus 7 L~~~L~~aEeaL~~k 21 (94)
T 3jsv_C 7 LRQQLQQAEEALVAK 21 (94)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 444444444443333
No 289
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=87.29 E-value=1 Score=33.75 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=16.7
Q ss_pred hhhhhHHHHHHhhccchhHHHhHHHHHhhHHH
Q 010551 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVA 442 (507)
Q Consensus 411 ~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~ 442 (507)
+...++++++.++.+...+++++...+.+++.
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555555554444433
No 290
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=87.24 E-value=8.7 Score=37.66 Aligned_cols=53 Identities=9% Similarity=0.066 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHh
Q 010551 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~ 443 (507)
++.|+....+++.......+-...|+..+...+.++.+.+..+++...++++.
T Consensus 102 LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~ 154 (464)
T 1m1j_B 102 LRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELH 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Confidence 44444444444332222222223333334444444433333333333333333
No 291
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.20 E-value=9.5 Score=35.19 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=56.2
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE----CCEEEEEcCCCCCCCccCcEEEEEC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDL 175 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~iy~~GG~~~~~~~~n~~~~~d~ 175 (507)
++.+++.|+.+ ..+.+||+.++....+.. +..-.....++.+ ++.+++.|+.+. .+.++|+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~---l~gH~~~V~~v~~~~~~~~~~l~s~s~D~------~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIAD---LRGHEGPVWQVAWAHPMYGNILASCSYDR------KVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEE---EECCSSCEEEEEECCGGGSSCEEEEETTS------CEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEE---EcCCCccEEEEEeCCCCCCCEEEEEECCC------EEEEEEC
Confidence 45566666643 347788887765433221 1101111222333 246677777653 4888999
Q ss_pred CCCcEEEeccCCCCCCCCCCceEEEEcC--CEEEEEcCCCCCCCCCcEEEEECCCC-cEEe
Q 010551 176 ETMTWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTN-EWSQ 233 (507)
Q Consensus 176 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~--~~l~v~GG~~~~~~~~~i~~~d~~~~-~W~~ 233 (507)
.+..|..+..... ....-.+++...+ +.+++.|+.++ .+.++|+... .|..
T Consensus 89 ~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 89 ENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEV 142 (316)
T ss_dssp SSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEE
T ss_pred CCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcce
Confidence 8877654432111 0111122222222 44666676543 4777777664 4643
No 292
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=87.07 E-value=21 Score=33.99 Aligned_cols=69 Identities=9% Similarity=0.077 Sum_probs=38.8
Q ss_pred CCeEEEEeccCC----CCCcceEEEEECCCCcE-EEeccCCCCCCCCCCCCceEEEEEcCce-EEEEEccCCCCcCceEE
Q 010551 253 DENWYIVGGGDN----NNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEH-HLVAFGGYNGKYNNEVF 326 (507)
Q Consensus 253 ~~~l~v~GG~~~----~~~~~~~~~~d~~~~~W-~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~ 326 (507)
++++||...... ....++++++|+.+.+- ..++ ++. ......+..++. .+|+..+. .+++.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~--------~p~~i~~s~Dg~~~l~v~~~~----~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGH--------DVDAISVAQDGGPDLYALSAG----TEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCC--------CcCeEEECCCCCeEEEEEcCC----CCeEE
Confidence 468888754211 12346899999988765 3342 221 112333344444 56664421 47899
Q ss_pred EEECCCCC
Q 010551 327 VMRLKPRD 334 (507)
Q Consensus 327 ~~~~~~~~ 334 (507)
++|..+..
T Consensus 345 ViD~~t~~ 352 (373)
T 2mad_H 345 IYDAGAGD 352 (373)
T ss_pred EEECCCCC
Confidence 99987654
No 293
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.99 E-value=19 Score=33.39 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=56.7
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++.+++.|+.+. .+.+||+.++.-..... ...... ..++.+ ++.+++.|+.++ .+.+||+.+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~---~~~~~~-i~~~~~~pdg~~lasg~~dg------~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHS---AKSDVE-YSSGVLHKDSLLLALYSPDG------ILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEEC---CCSSCC-CCEEEECTTSCEEEEECTTS------CEEEEESSC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEe---cCCCCc-eEEEEECCCCCEEEEEcCCC------EEEEEECCC
Confidence 445666666432 38899999887644331 111111 223333 467777787653 599999987
Q ss_pred CcEE--EeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 178 MTWD--AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 178 ~~W~--~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
..-. .+.. .....-.++....++..++.|+ + +.+.+||+.+..
T Consensus 202 ~~~~~~~~~~----~h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 202 PDQASSRFPV----DEEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDV 246 (343)
T ss_dssp TTSCCEECCC----CTTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSST
T ss_pred CCCCccEEec----cCCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCC
Confidence 7643 2211 0011111222234554666665 2 168899987754
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.94 E-value=20 Score=33.42 Aligned_cols=213 Identities=11% Similarity=0.116 Sum_probs=104.8
Q ss_pred CCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEcc-CCceeeeccccccCCCccccCCCcCCCC
Q 010551 12 YDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLR-SLAWSNLRLETELDADKTEDSGLLEVLP 89 (507)
Q Consensus 12 ~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~p~ 89 (507)
-..|+.+.. |....-.++... .+.+|++|- . ..++. ..+ -.+|+.+..... .+
T Consensus 24 g~~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~-~-----g~i~~-s~DgG~tW~~~~~~~~--------------~~ 78 (327)
T 2xbg_A 24 YNPWEAIQL----PTTATILDMSFIDRHHGWLVGV-N-----ATLME-TRDGGQTWEPRTLVLD--------------HS 78 (327)
T ss_dssp SCCEEEEEC----SCSSCEEEEEESSSSCEEEEET-T-----TEEEE-ESSTTSSCEECCCCCS--------------CC
T ss_pred CCCceEeec----CCCCcEEEEEECCCCcEEEEcC-C-----CeEEE-eCCCCCCCeECCCCCC--------------CC
Confidence 468998873 222222233332 567888663 1 12333 333 348988753210 11
Q ss_pred CccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE-ECCEEEEEcCCCCCCCccC
Q 010551 90 PMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL-VGSRLIIFGGEDRSRKLLN 168 (507)
Q Consensus 90 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~iy~~GG~~~~~~~~n 168 (507)
.....++...++.+|+.|.. ..+++-+-.-.+|+.+......|.. .+.++. -++.+|+.|...
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~g------- 142 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLPGS--PRLIKALGNGSAEMITNVG------- 142 (327)
T ss_dssp CCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCSSC--EEEEEEEETTEEEEEETTC-------
T ss_pred CccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCCCC--eEEEEEECCCCEEEEeCCc-------
Confidence 12233444456788887531 1244422224589998632112221 233333 356888776421
Q ss_pred cEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECC-CCcEEecccCCCCCCCCCcc
Q 010551 169 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 169 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~ 247 (507)
.+++-+=.-.+|+.+.. +.+...++++...++.++++|-. ..+++-+-. -..|+.+.. +.+...+
T Consensus 143 ~v~~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~----~~~~~~~ 208 (327)
T 2xbg_A 143 AIYRTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEPHNR----TTSRRLH 208 (327)
T ss_dssp CEEEESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEEEEC----CSSSCEE
T ss_pred cEEEEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeECCC----CCCCccc
Confidence 24443323557999864 22233444544455656666532 135554322 568998632 2334444
Q ss_pred EEEEE-CCeEEEEeccCCCCCcceEEEEECC-CCcEEEec
Q 010551 248 AGITI-DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILT 285 (507)
Q Consensus 248 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~-~~~W~~v~ 285 (507)
.++.. ++.+|+++.. + .+++.+.. ..+|+.+.
T Consensus 209 ~~~~~~~g~~~~~~~~-G-----~~~~s~~D~G~tW~~~~ 242 (327)
T 2xbg_A 209 NMGFTPDGRLWMIVNG-G-----KIAFSDPDNSENWGELL 242 (327)
T ss_dssp EEEECTTSCEEEEETT-T-----EEEEEETTEEEEECCCB
T ss_pred eeEECCCCCEEEEeCC-c-----eEEEecCCCCCeeEecc
Confidence 44443 4577776531 1 24444333 56788764
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=86.69 E-value=17 Score=38.15 Aligned_cols=154 Identities=6% Similarity=-0.072 Sum_probs=78.6
Q ss_pred ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE--ECCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 99 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 99 ~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
.+++||+.-.. ...|+++++....-..+... .+..++ .+++ .++.||+.--. ..+.|+++++.
T Consensus 463 ~~g~LY~tD~~------~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~~-----~~~~I~~~~~d 527 (699)
T 1n7d_A 463 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGGLN 527 (699)
T ss_dssp SSSBCEECCTT------TSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCCS-----SSCCEEBCCSS
T ss_pred eCCcEEEEecc------CCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEcccC-----CCCeEEEEeCC
Confidence 46788885321 34589999887654444321 111111 1222 25677764311 12468888876
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCe
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDEN 255 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 255 (507)
...-..+... .+. .-.++++- .++.||+.-.. .+.|+++++....-..+.. ........+++++.++.
T Consensus 528 G~~~~~l~~~-~l~---~PnGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~--~~~~~~~P~glavd~~~ 596 (699)
T 1n7d_A 528 GVDIYSLVTE-NIQ---WPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILE--DEKRLAHPFSLAVFEDK 596 (699)
T ss_dssp SCCCCEESCS-SCS---SCCCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECC--CSSSCSSCCCCEEETTE
T ss_pred CCCeeEEEeC-CCC---CccEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEe--cCCcCCCceEeEEECCE
Confidence 5433333211 111 11223332 35668886432 3578999986543333211 11111234466777888
Q ss_pred EEEEeccCCCCCcceEEEEECCCCcEEE
Q 010551 256 WYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
+|+.-. ....|.++|+.+..-..
T Consensus 597 lywtd~-----~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 597 VFWTDI-----INEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEEECS-----TTTCEEEEETTTEEEEE
T ss_pred EEEEeC-----CCCeEEEEEccCCCceE
Confidence 988842 23468888877665433
No 296
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=86.43 E-value=19 Score=32.87 Aligned_cols=137 Identities=9% Similarity=0.079 Sum_probs=67.3
Q ss_pred ECCEEEEEeccCCCCCCcceEEEEECC-CCcEEEeecCCCCCCCCcCcEEEEE-CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 99 WGTKLLILGGHYKKSSDSMIVRFIDLE-TNLCGVMETSGKVPVTRGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 99 ~~~~lyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~g~~p~~r~~~~~~~~-~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
.++.||+... ...++.||+. ...|..... .. ...+.+.. ++.||+ |.. .+.++.||+.
T Consensus 106 ~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~-----~~-~~~~~~~~~~g~l~v-gt~------~~~l~~~d~~ 165 (330)
T 3hxj_A 106 FEDILYVTSM-------DGHLYAINTDGTEKWRFKTK-----KA-IYATPIVSEDGTIYV-GSN------DNYLYAINPD 165 (330)
T ss_dssp ETTEEEEECT-------TSEEEEECTTSCEEEEEECS-----SC-CCSCCEECTTSCEEE-ECT------TSEEEEECTT
T ss_pred ECCEEEEEec-------CCEEEEEcCCCCEEEEEcCC-----Cc-eeeeeEEcCCCEEEE-EcC------CCEEEEECCC
Confidence 3888887532 2348999988 234654421 11 11222333 456665 332 2458999987
Q ss_pred CCc--EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC-CcEEecccCCCCCCCCCccEEEEE-
Q 010551 177 TMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITI- 252 (507)
Q Consensus 177 t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~- 252 (507)
++ |..... .....+++...++.+|+.. ..++.||... ..|.... +. ....+++..
T Consensus 166 -g~~~~~~~~~------~~~~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~-----~~-~~~~~~~~~~ 224 (330)
T 3hxj_A 166 -GTEKWRFKTN------DAITSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYA-----GY-WTVTRPAISE 224 (330)
T ss_dssp -SCEEEEEECS------SCCCSCCEECTTCCEEEES--------SSEEEECTTSCEEEEECC-----SS-CCCSCCEECT
T ss_pred -CCEeEEEecC------CCceeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEcc-----CC-cceeceEECC
Confidence 43 554321 1122233333456566643 4688998432 2465531 11 112233333
Q ss_pred CCeEEEEeccCCCCCcceEEEEECCCCc-EE
Q 010551 253 DENWYIVGGGDNNNGCQETIVLNMTKLA-WS 282 (507)
Q Consensus 253 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~-W~ 282 (507)
++.+|+... -..++.||..... |.
T Consensus 225 ~g~l~v~t~------~~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 225 DGTIYVTSL------DGHLYAINPDGTEKWR 249 (330)
T ss_dssp TSCEEEEET------TTEEEEECTTSCEEEE
T ss_pred CCeEEEEcC------CCeEEEECCCCCEeEE
Confidence 346666421 1247778765443 44
No 297
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.41 E-value=24 Score=33.91 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=57.9
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++.+++.|+.+ ..+.+||+.+++-...- ..+.......++.+ ++.+++.|+.++ .+.+||+.+
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTRG------IIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETTS------CEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCCC------eEEEEEcCC
Confidence 36677776653 35899999887644332 11111122333444 457777777653 589999988
Q ss_pred CcEEEeccCCCCCCCCCCceEEEE-----cCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALH-----ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~-----~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
......-.. + .......+.+ .++.+++.|+.+ ..+.+||+.++.-.
T Consensus 246 ~~~~~~~~~---~-~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 296 (437)
T 3gre_A 246 NVLIRSWSF---G-DHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQ 296 (437)
T ss_dssp TEEEEEEBC---T-TCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEE
T ss_pred ccEEEEEec---C-CCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEE
Confidence 665332110 1 0101111111 234456666543 25888998877643
No 298
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=86.37 E-value=4.7 Score=28.59 Aligned_cols=12 Identities=17% Similarity=0.362 Sum_probs=4.8
Q ss_pred HHhHHHHHHHHH
Q 010551 475 RQQKSAFEQEME 486 (507)
Q Consensus 475 ~~~~~~~~~~~~ 486 (507)
+.+++.++++++
T Consensus 58 ~~e~~~l~~~~e 69 (81)
T 1wt6_A 58 EAHVRQLQERME 69 (81)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344444443
No 299
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=86.26 E-value=5.6 Score=36.01 Aligned_cols=33 Identities=30% Similarity=0.394 Sum_probs=19.9
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 010551 455 AELQKMLESSQTIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 455 ~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~~ 487 (507)
...++.|.+..++..+..++..+++.++++.++
T Consensus 69 ~~mq~~Le~Ere~~~~Rd~~a~~k~~Le~~ier 101 (302)
T 3ibp_A 69 EYLQQLLEREREAIVERDEVGARKNAVDEEIER 101 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555566666667777777764
No 300
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=86.13 E-value=4.3 Score=29.38 Aligned_cols=33 Identities=30% Similarity=0.205 Sum_probs=13.9
Q ss_pred HhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHH
Q 010551 437 QGQLVAERSRCFKLEAQIAELQKMLESSQTIEN 469 (507)
Q Consensus 437 ~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~ 469 (507)
..+++.++.++..|+-++++..-++.++++.++
T Consensus 26 q~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQr 58 (83)
T 2xdj_A 26 QQQLSDNQSDIDSLRGQIQENQYQLNQVVERQK 58 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444443333
No 301
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=85.81 E-value=4.4 Score=28.08 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=19.7
Q ss_pred HHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 418 KIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 418 ~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
.++.+..+.+++.+.+...+++++..++.+.......+.++.+|...
T Consensus 5 ~v~~l~~E~eel~~klk~~~ee~~~~~eee~~~~~~k~~lek~L~~E 51 (71)
T 1uix_A 5 DVANLANEKEELNNKLKEAQEQLSRLKDEEISAAAIKAQFEKQLLTE 51 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445544444444444444433333223333444444333
No 302
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=85.67 E-value=22 Score=32.81 Aligned_cols=144 Identities=15% Similarity=0.097 Sum_probs=74.6
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CC-EEEEEcCCC-----------------CC---CCccCcEEE
Q 010551 116 SMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GS-RLIIFGGED-----------------RS---RKLLNDVHF 172 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~-~iy~~GG~~-----------------~~---~~~~n~~~~ 172 (507)
...++++|+.++....+... +. .....+ ++ .|++..... +. ......+++
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~---~~----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEA---KN----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWI 156 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE---SE----EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEE
T ss_pred cceEEEEECCCCceEEEEcC---CC----ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEE
Confidence 45699999999887766521 21 222333 44 444443110 00 011356999
Q ss_pred EECCCCcE-EEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCC---C-CCcEEEEECCCCcEEecccCCCCCCCCCcc
Q 010551 173 LDLETMTW-DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---F-FNDLHVLDLQTNEWSQPEIKGDLVTGRAGH 247 (507)
Q Consensus 173 ~d~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~---~-~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~ 247 (507)
+|+.++.. ..+.. + .....+...++ +++.+..+... . ...+|.+| ++.+..+... ...
T Consensus 157 ~d~~~~~~~~~l~~------~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-------~~~ 219 (347)
T 2gop_A 157 FDTESEEVIEEFEK------P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-------VSF 219 (347)
T ss_dssp EETTTTEEEEEEEE------E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-------ESE
T ss_pred EECCCCeEEeeecC------C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-------cce
Confidence 99998887 55542 1 23344444566 55555433221 2 45789998 6777665321 111
Q ss_pred EEEEECCeEEEEeccCC---CCCcceEEEEECCCCcEEEec
Q 010551 248 AGITIDENWYIVGGGDN---NNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 248 ~~~~~~~~l~v~GG~~~---~~~~~~~~~~d~~~~~W~~v~ 285 (507)
....-+++.+++.+... ......+|++| +..+..+.
T Consensus 220 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 220 YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred eeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 12233554444443222 11245789998 56666653
No 303
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.67 E-value=20 Score=32.35 Aligned_cols=226 Identities=14% Similarity=0.087 Sum_probs=101.9
Q ss_pred CceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCCCcceEEEEECCCCcEE
Q 010551 53 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 130 (507)
Q Consensus 53 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~ 130 (507)
+.|.++|+.++.-...-.... ......++.+ +++.++.|+.+ ..+.++|..+++-.
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~----------------~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecC----------------CCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 469999999887655432211 0111223333 55666777653 24888999988644
Q ss_pred EeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEc
Q 010551 131 VMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 131 ~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 210 (507)
.... .. .....+....+.+++.|+.+. .+..++..+.........+. ...........++.+++.|
T Consensus 103 ~~~~---~h--~~~~~~~~~~~~~l~s~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~ 168 (318)
T 4ggc_A 103 RNMT---SH--SARVGSLSWNSYILSSGSRSG------HIHHHDVRVAEHHVATLSGH---SQEVCGLRWAPDGRHLASG 168 (318)
T ss_dssp EEEE---CC--SSCEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEE
T ss_pred EEec---Cc--cceEEEeecCCCEEEEEecCC------ceEeeecCCCceeEEEEcCc---cCceEEEEEcCCCCEEEEE
Confidence 3321 11 112233344455556665432 35555555443332221111 1111222223344466666
Q ss_pred CCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCC
Q 010551 211 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 211 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~ 288 (507)
+.+ ..+.+||+.++.-..............-.+++.. +..++.+++.... ..+.++|.....-.......
T Consensus 169 ~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~i~lwd~~~~~~~~~~~~~ 240 (318)
T 4ggc_A 169 GND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSGACLSAVDAH 240 (318)
T ss_dssp ETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT---CEEEEEETTTCCEEEEEECS
T ss_pred ecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC---CEEEEEecccccccccccce
Confidence 654 2577888876532111000000000011111221 3344443322221 24667787766544332211
Q ss_pred CCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECCCC
Q 010551 289 GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
.........+....+++.+|.. ...+.++|+.+.
T Consensus 241 --------~~v~~~~~~~~~~~~~~~sg~~---d~~i~iwd~~~~ 274 (318)
T 4ggc_A 241 --------SQVCSILWSPHYKELISGHGFA---QNQLVIWKYPTM 274 (318)
T ss_dssp --------SCEEEEEEETTTTEEEEEECTT---TCCEEEEETTTC
T ss_pred --------eeeeeeeecccccceEEEEEcC---CCEEEEEECCCC
Confidence 1123333445555666655543 345778887544
No 304
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=85.47 E-value=6.4 Score=27.47 Aligned_cols=24 Identities=29% Similarity=0.471 Sum_probs=10.2
Q ss_pred HHHHHhhccchhHHHhHHHHHhhH
Q 010551 417 EKIDEVNSTHSELSKELSSVQGQL 440 (507)
Q Consensus 417 ~~l~~~~~~~~e~~~el~~~~~~~ 440 (507)
+++++++..+.+++++++..+.++
T Consensus 7 ~kLq~~E~~N~~Le~~v~~le~~L 30 (72)
T 3cve_A 7 MKLQEVEIRNKDLEGQLSEMEQRL 30 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 334444444444444444443333
No 305
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=85.25 E-value=8.1 Score=36.25 Aligned_cols=17 Identities=6% Similarity=0.153 Sum_probs=8.8
Q ss_pred chhhHHHHHHHHHHHhh
Q 010551 387 VRTDIDAIKEDKRVLEL 403 (507)
Q Consensus 387 ~~~~~~~l~~~~~~~~~ 403 (507)
+...++.|+.+...+.+
T Consensus 65 ~~~rIe~L~~~L~~~s~ 81 (390)
T 1deq_A 65 FTSRINKLRDSLFNYQK 81 (390)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33445566555555544
No 306
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=85.15 E-value=33 Score=34.35 Aligned_cols=143 Identities=8% Similarity=0.021 Sum_probs=66.2
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++..++.|+.+ ..+.+||.....-..+.. ......++.+ +++.++.|+.+ ..+.+||...
T Consensus 355 ~g~~l~~~~~d------g~v~~~~~~~~~~~~~~~------~~~~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~ 416 (577)
T 2ymu_A 355 DGQTIASASDD------KTVKLWNRNGQLLQTLTG------HSSSVRGVAFSPDGQTIASASDD------KTVKLWNRNG 416 (577)
T ss_dssp TSSEEEEEETT------SEEEEEETTCCEEEEEEC------CSSCEEEEEECTTSSCEEEEETT------SEEEEECTTC
T ss_pred CCCEEEEEeCC------CEEEEEcCCCCEEEEecC------CCCCeEEEEECCCCCEEEEEeCC------CEEEEEeCCC
Confidence 45566666543 237778865444333321 1111222333 44566666654 2477788644
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeE
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENW 256 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l 256 (507)
..-..+.. . ...-.+++...++.+++.|+.+ ..+.+||........+. + ....-.+++.. ++++
T Consensus 417 ~~~~~~~~--~---~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~--~---~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 417 QLLQTLTG--H---SSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQTLT--G---HSSSVRGVAFSPDGQT 481 (577)
T ss_dssp CEEEEEEC--C---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEEEE--C---CSSCEEEEEECTTSCE
T ss_pred CEEEEecC--C---CCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEEEc--C---CCCCEEEEEEcCCCCE
Confidence 33333321 0 1111122333455466666643 25778887554433331 1 11111122222 4567
Q ss_pred EEEeccCCCCCcceEEEEECCCCc
Q 010551 257 YIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 257 ~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
++.|+.++ .+.++|.....
T Consensus 482 las~~~d~-----~i~iw~~~~~~ 500 (577)
T 2ymu_A 482 IASASDDK-----TVKLWNRNGQL 500 (577)
T ss_dssp EEEEETTS-----EEEEEETTSCE
T ss_pred EEEEeCCC-----EEEEEcCCCCE
Confidence 77766432 46777865443
No 307
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.13 E-value=43 Score=35.66 Aligned_cols=148 Identities=5% Similarity=-0.092 Sum_probs=82.5
Q ss_pred ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE--ECCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 99 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 99 ~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
++++||+.-.. ...|+++++....-+.+... .+..| ..+++ .++.||+.--.. .+.|+++++.
T Consensus 481 ~~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~-~l~~P---~gIaVDp~~g~LYwtD~g~-----~~~I~~~~~d 545 (791)
T 3m0c_C 481 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRE-NGSKP---RAIVVDPVHGFMYWTDWGT-----PAKIKKGGLN 545 (791)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSSSEEEEEEC-TTCCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETT
T ss_pred cCCcEEEEecC------CCeEEEEeCCCCeEEEEEeC-CCCCc---ceEEEecCCCCEEEecCCC-----CCeEEEEecC
Confidence 36799987432 44699999987765555421 22222 12333 257888864111 2469999987
Q ss_pred CCcEEEeccCCCCCCCCCCceEEEE--cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecc-cCCCCCCCCCccEEEEEC
Q 010551 177 TMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE-IKGDLVTGRAGHAGITID 253 (507)
Q Consensus 177 t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~-~~~~~p~~r~~~~~~~~~ 253 (507)
...-..+... .+ .....+.+ .++.||+.-.. .+.|+++++....-..+. ..+.++ ..+++++.+
T Consensus 546 G~~~~~lv~~-~l----~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~---~P~glav~~ 612 (791)
T 3m0c_C 546 GVDIYSLVTE-NI----QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLA---HPFSLAVFE 612 (791)
T ss_dssp SCCEEEEECS-SC----SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTS---SEEEEEEET
T ss_pred CCceEEEEeC-CC----CCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccC---CCCEEEEeC
Confidence 6554444321 11 12223333 36789987432 357999998765433332 112233 234777788
Q ss_pred CeEEEEeccCCCCCcceEEEEECCCC
Q 010551 254 ENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 254 ~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
++||+.-. ....|+.+|..++
T Consensus 613 ~~lYwtD~-----~~~~I~~~dk~tG 633 (791)
T 3m0c_C 613 DKVFWTDI-----INEAIFSANRLTG 633 (791)
T ss_dssp TEEEEEET-----TTTEEEEEETTTC
T ss_pred CEEEEEEC-----CCCEEEEEeCCCC
Confidence 89998843 2345677775443
No 308
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=84.51 E-value=16 Score=30.06 Aligned_cols=28 Identities=11% Similarity=0.280 Sum_probs=11.6
Q ss_pred hhhHHHHHHhhccchhHHHhHHHHHhhH
Q 010551 413 SRFREKIDEVNSTHSELSKELSSVQGQL 440 (507)
Q Consensus 413 ~~l~~~l~~~~~~~~e~~~el~~~~~~~ 440 (507)
..|...+++++..+.++...+...+.+.
T Consensus 53 ~eL~~~~~~Le~~n~~L~~~lke~~~~~ 80 (155)
T 2oto_A 53 EELEKAKQALEDQRKDLETKLKELQQDY 80 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444333333
No 309
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=84.48 E-value=0.29 Score=50.22 Aligned_cols=8 Identities=0% Similarity=-0.089 Sum_probs=3.5
Q ss_pred eEEEEEcc
Q 010551 309 HHLVAFGG 316 (507)
Q Consensus 309 ~~l~v~GG 316 (507)
.+.|.+++
T Consensus 254 ~F~I~~~~ 261 (575)
T 2i1j_A 254 KFIIKPID 261 (575)
T ss_dssp EEEEEESC
T ss_pred eEEEEEcc
Confidence 34444443
No 310
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=84.22 E-value=19 Score=30.85 Aligned_cols=154 Identities=12% Similarity=0.120 Sum_probs=77.2
Q ss_pred EEEECCEEEEEeccCCCCCCcceEEEEECCC---CcEEEeecC-CCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEE
Q 010551 96 MVKWGTKLLILGGHYKKSSDSMIVRFIDLET---NLCGVMETS-GKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 96 ~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t---~~W~~~~~~-g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~ 171 (507)
++.+.+.+|+|-|.. +|+++... +-=..+... ..+|.. ...+....++++|+|-|. ..|
T Consensus 11 ~~~~~g~~~fFkg~~--------~w~~~~~~~~~gyP~~I~~~w~glP~~-iDAa~~~~~g~~yfFkg~--------~yw 73 (196)
T 3c7x_A 11 VAMLRGEMFVFKERW--------FWRVRNNQVMDGYPMPIGQFWRGLPAS-INTAYERKDGKFVFFKGD--------KHW 73 (196)
T ss_dssp EEEETTEEEEEETTE--------EEEEETTEECTTCSEEHHHHSTTCCSS-CCEEEECTTSCEEEEETT--------EEE
T ss_pred EEEcCCEEEEEECCE--------EEEEECCccCCCCceEhhHhccCCCCC-ccEEEEeCCCcEEEecCC--------EEE
Confidence 446789999997642 77775321 101111111 023432 221211235789998773 468
Q ss_pred EEECCCCcE---EEeccCC-CCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe--cccCCCC-CCCC
Q 010551 172 FLDLETMTW---DAVEVTQ-TPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ--PEIKGDL-VTGR 244 (507)
Q Consensus 172 ~~d~~t~~W---~~~~~~~-~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~--~~~~~~~-p~~r 244 (507)
+|+-.+... ..+...+ .+|......+.....++++|+|-| +..|+||..+++-.. +...... -.|.
T Consensus 74 ~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~ 146 (196)
T 3c7x_A 74 VFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPE 146 (196)
T ss_dssp EEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCS
T ss_pred EEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCC
Confidence 887532110 1222211 133222332222234678999987 478999987754322 1000111 1122
Q ss_pred CccEEEEE-CC-eEEEEeccCCCCCcceEEEEECCCCc
Q 010551 245 AGHAGITI-DE-NWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 245 ~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
.-.++... ++ ++|+|-| +..|.||..+..
T Consensus 147 ~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 23344444 33 8999866 357899987754
No 311
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=84.12 E-value=21 Score=31.21 Aligned_cols=155 Identities=13% Similarity=0.063 Sum_probs=76.9
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEEccCCc-eeeeccccccCCCccccCCCcCCCCCccceeEEE-ECCEEEEEecc
Q 010551 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLA-WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGH 109 (507)
Q Consensus 32 ~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~ 109 (507)
+++.+.+.+|+|-| +.+|.++..... ........ .....+.....+... .++++|+|-|.
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~-----------~wp~lp~~IDAA~~~~~~~k~yfFkG~ 96 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVAT-----------FWPELPEKIDAVYEAPQEEKAVFFAGN 96 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGG-----------TCTTSCSCCSEEEEETTTTEEEEEETT
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHH-----------hcCCCCCCccEEEEECCCCEEEEEeCC
Confidence 34456899999988 335665543321 11111000 011122333333332 26899999763
Q ss_pred CCCCCCcceEEEEECCCCc---EEEeecCCCCCCCCcC-cEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEE-
Q 010551 110 YKKSSDSMIVRFIDLETNL---CGVMETSGKVPVTRGG-HSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDA- 182 (507)
Q Consensus 110 ~~~~~~~~~~~~yd~~t~~---W~~~~~~g~~p~~r~~-~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~- 182 (507)
..|+|+..+.. =+.+...| .|..... .++... ++++|+|-|. ..|+||..+.+-..
T Consensus 97 --------~yW~y~~~~~~~gyPk~I~~~g-~p~~~~~IDAAf~~~~~g~~YfFkG~--------~ywr~d~~~~~v~~g 159 (218)
T 1gen_A 97 --------EYWIYSASTLERGYPKPLTSLG-LPPDVQRVDAAFNWSKNKKTYIFAGD--------KFWRYNEVKKKMDPG 159 (218)
T ss_dssp --------EEEEEETTEECTTCSEEGGGGT-CCTTCCCCSEEEEETTTTEEEEEETT--------EEEEEETTTTEECSS
T ss_pred --------EEEEEcCccccCCCCccHhhcC-CCCCcCCccEEEEEcCCCeEEEEECC--------EEEEEECccccccCC
Confidence 38889852110 01111112 2221112 233332 5799999773 48899987653221
Q ss_pred ----ec-cCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 183 ----VE-VTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 183 ----~~-~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
+. .=..+| ..-.++.... ++.+|+|-| +..|+||..+..
T Consensus 160 yPr~i~~~w~g~p--~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 160 FPKLIADAWNAIP--DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CCEEHHHHSSSCC--SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCcchhhccCCCC--CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 11 000122 2233444443 578999977 468888876554
No 312
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=84.12 E-value=5 Score=29.74 Aligned_cols=40 Identities=30% Similarity=0.516 Sum_probs=27.1
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 010551 448 FKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 448 ~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~~ 487 (507)
.+++.++.++++++..++..+++.-.++.+-.-++.+|+.
T Consensus 50 ~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~ 89 (96)
T 1t3j_A 50 KHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELEN 89 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4556666667777777777777777777666667777664
No 313
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.03 E-value=26 Score=32.19 Aligned_cols=145 Identities=16% Similarity=0.159 Sum_probs=71.3
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++..++.|+.+ ..+.++|+.++.-...-... ......+.+ ++.+++.|+.+.
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~l~s~s~D~--- 129 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFVGH------------------KSDVMSVDIDKKASMIISGSRDK--- 129 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECC------------------SSCEEEEEECTTSCEEEEEETTS---
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEccC------------------CCcEEEEEEcCCCCEEEEEeCCC---
Confidence 45555666543 45889999877532211100 111122222 455666666543
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--------CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--------GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVT 186 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--------~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~ 186 (507)
.+.+||.....-..+. +. ......+.+ ++.+++.||.+. .+..+|+.+.+-...-.
T Consensus 130 ---~i~vwd~~~~~~~~~~--~h----~~~v~~~~~~~~~~~~~~~~~l~s~~~d~------~i~~wd~~~~~~~~~~~- 193 (319)
T 3frx_A 130 ---TIKVWTIKGQCLATLL--GH----NDWVSQVRVVPNEKADDDSVTIISAGNDK------MVKAWNLNQFQIEADFI- 193 (319)
T ss_dssp ---CEEEEETTSCEEEEEC--CC----SSCEEEEEECCC------CCEEEEEETTS------CEEEEETTTTEEEEEEC-
T ss_pred ---eEEEEECCCCeEEEEe--cc----CCcEEEEEEccCCCCCCCccEEEEEeCCC------EEEEEECCcchhheeec-
Confidence 3777887654333221 11 011111222 223556666543 48888987765432211
Q ss_pred CCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 187 QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 187 ~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
+. ...-.+++...++.+++.||.+ ..+.++|+.+.+-
T Consensus 194 ~h---~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~~~~~~ 230 (319)
T 3frx_A 194 GH---NSNINTLTASPDGTLIASAGKD-----GEIMLWNLAAKKA 230 (319)
T ss_dssp CC---CSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEE
T ss_pred CC---CCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 11 1111223333455577777754 3688899887653
No 314
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=83.90 E-value=3.8 Score=32.51 Aligned_cols=28 Identities=11% Similarity=0.255 Sum_probs=12.2
Q ss_pred HHHHhhccchhHHHhHHHHHhhHHHhhh
Q 010551 418 KIDEVNSTHSELSKELSSVQGQLVAERS 445 (507)
Q Consensus 418 ~l~~~~~~~~e~~~el~~~~~~~~~~~~ 445 (507)
++.++...+..+..++.....++..++.
T Consensus 33 ~l~~l~~~l~~~~~e~~~L~~~l~eE~~ 60 (135)
T 2e7s_A 33 DYNTLKRELSDRDDEVKRLREDIAKENE 60 (135)
T ss_dssp HHHHHHHHTTTHHHHHHTHHHHHHHTTS
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3333333444444444444444444433
No 315
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.66 E-value=18 Score=36.66 Aligned_cols=153 Identities=8% Similarity=-0.047 Sum_probs=73.5
Q ss_pred CEEEEEeccCCCCCCcceEEEEEC--CCCcEEEeecCCCCCCCCcCcEEEEECC-EEEEEcCCCCCCCccCcEEEEECCC
Q 010551 101 TKLLILGGHYKKSSDSMIVRFIDL--ETNLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 101 ~~lyv~GG~~~~~~~~~~~~~yd~--~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
+++.+.+..... .....+|..++ .... ..+. ..+.. . ..+...++ .+++..+... .+.+||+.+
T Consensus 75 d~~l~~~~~~~g-~~~~~l~~~~~~~~g~~-~~l~---~~~~~-~-~~~~s~dg~~~~~~s~~~~------~~~l~d~~~ 141 (582)
T 3o4h_A 75 GRVILVRDVSKG-AEQHALFKVNTSRPGEE-QRLE---AVKPM-R-ILSGVDTGEAVVFTGATED------RVALYALDG 141 (582)
T ss_dssp SEEEEEEECSTT-SCCEEEEEEETTSTTCC-EECT---TSCSB-E-EEEEEECSSCEEEEEECSS------CEEEEEEET
T ss_pred CeEEEEeccCCC-CcceEEEEEeccCCCcc-cccc---CCCCc-e-eeeeCCCCCeEEEEecCCC------CceEEEccC
Confidence 355554443111 12345788887 4433 2322 11111 1 22334444 5555544322 244778888
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCeE
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENW 256 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l 256 (507)
++-..+... +. ...+.-.+++.+++++.+... ...++++|+.++.+..+... +. .....+.. +++.
T Consensus 142 g~~~~l~~~---~~----~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~---~~--~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 142 GGLRELARL---PG----FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSG---EG--SFSSASISPGMKV 208 (582)
T ss_dssp TEEEEEEEE---SS----CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCS---SC--EEEEEEECTTSCE
T ss_pred CcEEEeecC---CC----ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecC---CC--ccccceECCCCCE
Confidence 877666531 11 233332333355554433221 23599999999888765321 11 11111111 4444
Q ss_pred EEEeccCCCCCcceEEEEECCCCcEE
Q 010551 257 YIVGGGDNNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 257 ~v~GG~~~~~~~~~~~~~d~~~~~W~ 282 (507)
++.+.. .....++++|+.+....
T Consensus 209 l~~~~~---~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 209 TAGLET---AREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEC---SSCEEEEEECTTTCCEE
T ss_pred EEEccC---CCeeEEEEEcCCCCcEE
Confidence 443321 22356888888887766
No 316
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=83.47 E-value=4.5 Score=28.22 Aligned_cols=48 Identities=17% Similarity=0.266 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHH
Q 010551 389 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSV 436 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~ 436 (507)
.+++.|-.+..++.+......--...|-..++++..+.+-+..|+...
T Consensus 9 kevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~ 56 (77)
T 2w83_C 9 REVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAV 56 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 334555444444433333333344445555555554444443333333
No 317
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=83.34 E-value=23 Score=31.11 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=58.7
Q ss_pred ECCEEEEEeccCCCCCCcceEEEEECCCC----cEEEee-c--CC--CCCCC--CcCcEEEEE---CCEEEEEcCCCCCC
Q 010551 99 WGTKLLILGGHYKKSSDSMIVRFIDLETN----LCGVME-T--SG--KVPVT--RGGHSVTLV---GSRLIIFGGEDRSR 164 (507)
Q Consensus 99 ~~~~lyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~~-~--~g--~~p~~--r~~~~~~~~---~~~iy~~GG~~~~~ 164 (507)
.++++|+|-|. .+|+||..++ ....-+ . .+ .+|.. ....-++.. ++++|+|-|.
T Consensus 69 ~~g~~~fFkg~--------~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~---- 136 (225)
T 3oyo_A 69 EASEAYVFSGN--------HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN---- 136 (225)
T ss_dssp STTEEEEEETT--------EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT----
T ss_pred CCCeEEEEcCC--------EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC----
Confidence 58999999773 3899986432 221110 0 01 12221 012223332 5799999884
Q ss_pred CccCcEEEEECCCCcEEEe-ccCC-CCCC------CCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCC
Q 010551 165 KLLNDVHFLDLETMTWDAV-EVTQ-TPPA------PRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 165 ~~~n~~~~~d~~t~~W~~~-~~~~-~~p~------~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~ 228 (507)
..|+||..+.+...- .... ..|. +..-.++... .++++|+|-| +..|+||..+
T Consensus 137 ----~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~~ 198 (225)
T 3oyo_A 137 ----KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFTP 198 (225)
T ss_dssp ----EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECCT
T ss_pred ----eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCc
Confidence 479999776655431 1100 1221 2223333333 5788999988 4789999873
No 318
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=83.17 E-value=32 Score=32.66 Aligned_cols=106 Identities=16% Similarity=0.109 Sum_probs=57.6
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
+++.++.|+.+. .+.++|+.+.+-...-. +. ...-.+++...++..++.|+.+ ..+.++|+.++.
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~~-~h---~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMILQ-GH---EQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEEC-CC---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTE
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEc-cC---CCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCe
Confidence 456677777653 58999998876443321 11 1112233333444456666654 368889998876
Q ss_pred EEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEEEECCCCcE
Q 010551 231 WSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAW 281 (507)
Q Consensus 231 W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W 281 (507)
...... . .....+++.. ++.+++.|+.++ .+.+||+.+..-
T Consensus 199 ~~~~~~-~----~~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~ 241 (393)
T 1erj_A 199 CSLTLS-I----EDGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFL 241 (393)
T ss_dssp EEEEEE-C----SSCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCE
T ss_pred eEEEEE-c----CCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcE
Confidence 543211 0 1111122222 457777777543 377888877653
No 319
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=83.17 E-value=33 Score=32.79 Aligned_cols=216 Identities=8% Similarity=-0.026 Sum_probs=110.6
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCcccc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTED 81 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 81 (507)
+++.+|+.......+.. ......+++.. ++.||+.-- ....++.+++.......+.....
T Consensus 97 ~I~~i~~~~~~~~~~~~-----~~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~-------- 158 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN-----NLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGL-------- 158 (386)
T ss_dssp CEEEECTTSCCCEEEEC-----SCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSC--------
T ss_pred cceeeccCCCcEEEEec-----CCCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCC--------
Confidence 34455555555444432 11222333333 578887743 12468889988766554432210
Q ss_pred CCCcCCCCCccceeEEE--ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEE
Q 010551 82 SGLLEVLPPMSDHCMVK--WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIF 157 (507)
Q Consensus 82 ~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~ 157 (507)
.. -.++++ .++.||+.-.. ...++++++....-..+... .+..| ..+++- ++.||+.
T Consensus 159 --------~~-p~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~-~l~~P---~giavdp~~g~ly~t 219 (386)
T 3v65_B 159 --------ES-PGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQ-SLEKP---RAIALHPMEGTIYWT 219 (386)
T ss_dssp --------SC-CCCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECS-SCSCE---EEEEEETTTTEEEEE
T ss_pred --------CC-ccEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecC-CCCCC---cEEEEEcCCCeEEEe
Confidence 01 122333 37889987432 34688888876553433321 11111 122332 5688876
Q ss_pred cCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEeccc
Q 010551 158 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 236 (507)
Q Consensus 158 GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 236 (507)
--.. .+.++++++....-..+...+ +. .-.++++- .++.||+.-.. .+.|+++|+....-..+..
T Consensus 220 d~~~-----~~~I~r~~~dG~~~~~~~~~~-~~---~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~ 285 (386)
T 3v65_B 220 DWGN-----TPRIEASSMDGSGRRIIADTH-LF---WPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVIS 285 (386)
T ss_dssp ECSS-----SCEEEEEETTSCSCEEEECSS-CS---CEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEEC
T ss_pred ccCC-----CCEEEEEeCCCCCcEEEEECC-CC---CeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEE
Confidence 3211 357999998765444432211 11 11233332 46779886432 3579999886533222211
Q ss_pred CCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCC
Q 010551 237 KGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 237 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
... ...+++++.++.+|+.-- ....+..+|..+.
T Consensus 286 -~~~---~~P~giav~~~~ly~td~-----~~~~V~~~~~~~G 319 (386)
T 3v65_B 286 -QGL---PHPFAITVFEDSLYWTDW-----HTKSINSANKFTG 319 (386)
T ss_dssp -SSC---SSEEEEEEETTEEEEEET-----TTTEEEEEETTTC
T ss_pred -CCC---CCceEEEEECCEEEEeeC-----CCCeEEEEECCCC
Confidence 111 223466677888998842 2235778884443
No 320
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=82.98 E-value=14 Score=28.19 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHH
Q 010551 465 QTIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 465 ~~le~e~~~~~~~~~~~~~~~ 485 (507)
++|+-|+..+.++++..+.++
T Consensus 74 qeLqgEI~~Lnq~Lq~a~ae~ 94 (121)
T 3mq7_A 74 EELEGEITTLNHKLQDASAEV 94 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444333333
No 321
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=82.43 E-value=28 Score=31.52 Aligned_cols=109 Identities=9% Similarity=0.064 Sum_probs=53.5
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCC--cEEEeecCCCCCCCCcCcEEEEE----CCEEEEEcCCCCCCCccCcEEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVTRGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFL 173 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~----~~~iy~~GG~~~~~~~~n~~~~~ 173 (507)
++.+++.|+.+. .+.+||..++ .+..... .........++.+ ++.+++.|+.++ .+.+|
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~dg------~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSDQ------HIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYDK------TVKLW 86 (351)
T ss_dssp SSSEEEEEETTS------EEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETTS------CEEEE
T ss_pred CCCEEEEeeCCC------eEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCCC------eEEEE
Confidence 455666666432 3667776643 4444331 1111222233333 256777777653 47888
Q ss_pred ECCCC-------cEEEeccCCCCCCCCCCceEEEEcC--CEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 174 DLETM-------TWDAVEVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 174 d~~t~-------~W~~~~~~~~~p~~r~~~~~~~~~~--~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
|+.+. .|..+..... ....-.+++...+ +.+++.|+.+ ..+.+||+.+..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~ 145 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPS 145 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTT
T ss_pred ecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChH
Confidence 88664 2343332111 1111122233333 4466666654 358888887653
No 322
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=82.30 E-value=5.1 Score=31.77 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=12.2
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHHHhhHHHh
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAE 443 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~ 443 (507)
..+|...+.+-...-.+.++++..+..+++.+
T Consensus 48 ~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~L 79 (135)
T 2e7s_A 48 VKRLREDIAKENELRTKAEEEADKLNKEVEDL 79 (135)
T ss_dssp HHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333444444444333
No 323
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=82.29 E-value=35 Score=32.47 Aligned_cols=110 Identities=11% Similarity=0.052 Sum_probs=59.3
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCc--E-EEeecCCCCCCCCcCc-EEEEE--CCEEEEEcCCCCCCCccCcEEEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNL--C-GVMETSGKVPVTRGGH-SVTLV--GSRLIIFGGEDRSRKLLNDVHFL 173 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~~~~g~~p~~r~~~-~~~~~--~~~iy~~GG~~~~~~~~n~~~~~ 173 (507)
++++|+|-|. .+|+|+..+.. + ..+...| +|..-... ++... ++++|+|-|. ..|+|
T Consensus 236 ~g~~~fFkg~--------~yWr~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG~--------~yw~y 298 (365)
T 3ba0_A 236 RNQVFLFKDD--------KYWLISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVDN--------QYWRY 298 (365)
T ss_dssp GTEEEEEETT--------EEEECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEETT--------EEEEE
T ss_pred CCEEEEEeCC--------EEEEEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEECC--------EEEEE
Confidence 7899999763 27777643221 1 1222111 33321122 33333 4699999773 48899
Q ss_pred ECCCCcEEEeccC----CCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 174 DLETMTWDAVEVT----QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 174 d~~t~~W~~~~~~----~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
|..+.+-..-.+. +-+..+..-.++....++++|+|-| +..|+||..+.+-..
T Consensus 299 d~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 299 DERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp ETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred eCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 9776542211000 0011122233444454777999977 479999998877654
No 324
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=82.29 E-value=2.9 Score=30.69 Aligned_cols=14 Identities=7% Similarity=0.178 Sum_probs=5.9
Q ss_pred HHHHhHHHHHHHHH
Q 010551 473 ILRQQKSAFEQEME 486 (507)
Q Consensus 473 ~~~~~~~~~~~~~~ 486 (507)
.+.+++.+|..||+
T Consensus 72 ~YEeEI~rLr~eLe 85 (92)
T 3vp9_A 72 AYEEEIKHLKLGLE 85 (92)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444443
No 325
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=82.14 E-value=12 Score=27.19 Aligned_cols=11 Identities=55% Similarity=0.667 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q 010551 466 TIENEVQILRQ 476 (507)
Q Consensus 466 ~le~e~~~~~~ 476 (507)
+|+-|+..+.+
T Consensus 71 elqgEI~~Lnq 81 (99)
T 3ni0_A 71 ELENEVTKLNQ 81 (99)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 326
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=81.74 E-value=5.2 Score=28.30 Aligned_cols=8 Identities=25% Similarity=0.684 Sum_probs=2.9
Q ss_pred hHHHHHHh
Q 010551 415 FREKIDEV 422 (507)
Q Consensus 415 l~~~l~~~ 422 (507)
|+-.+.++
T Consensus 31 Lr~kv~el 38 (81)
T 3qh9_A 31 LKIKVEEL 38 (81)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 327
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=81.55 E-value=52 Score=34.52 Aligned_cols=17 Identities=12% Similarity=-0.031 Sum_probs=13.1
Q ss_pred cceEEEEECCCCcEEEe
Q 010551 116 SMIVRFIDLETNLCGVM 132 (507)
Q Consensus 116 ~~~~~~yd~~t~~W~~~ 132 (507)
..++++||+.++.-..+
T Consensus 91 ~~~~~~~d~~~~~~~~l 107 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITE 107 (740)
T ss_dssp EEEEEEEETTTTEECCS
T ss_pred ceEEEEEECCCCcEEEc
Confidence 35789999999976544
No 328
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=81.24 E-value=3.8 Score=23.74 Aligned_cols=28 Identities=11% Similarity=0.281 Sum_probs=16.4
Q ss_pred HHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010551 461 LESSQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 461 ~~~~~~le~e~~~~~~~~~~~~~~~~~~ 488 (507)
|++-++|.+++++-+.++.++.++.+++
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL 33 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKEL 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4444556666666666666666555544
No 329
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=81.10 E-value=29 Score=30.78 Aligned_cols=197 Identities=9% Similarity=-0.019 Sum_probs=105.4
Q ss_pred ceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEE
Q 010551 31 HAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLIL 106 (507)
Q Consensus 31 ~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~ 106 (507)
+.+++- ++.||+.-.. .+.+++||+....-..+.... ...-++++.. ++.||+.
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~-----------------~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQD-----------------LGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTT-----------------CCCEEEEEEETTTTEEEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECC-----------------CCCccEEEEEecCCeEEEE
Confidence 445544 5788887542 356999999765432222110 0112344443 5789987
Q ss_pred eccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEec
Q 010551 107 GGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 107 GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~ 184 (507)
-.. ...+.++++....-..+...+ . ... ..+++- +++||+..... ..+.+++++++...-..+.
T Consensus 97 d~~------~~~I~~~~~~g~~~~~~~~~~-~--~~P-~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~ 162 (267)
T 1npe_A 97 DSQ------LDRIEVAKMDGTQRRVLFDTG-L--VNP-RGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILA 162 (267)
T ss_dssp ETT------TTEEEEEETTSCSCEEEECSS-C--SSE-EEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEE
T ss_pred ECC------CCEEEEEEcCCCCEEEEEECC-C--CCc-cEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEE
Confidence 532 346899998765434333221 1 111 223332 57898875321 1356889988654433332
Q ss_pred cCCCCCCCCCCceEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccC
Q 010551 185 VTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGD 263 (507)
Q Consensus 185 ~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 263 (507)
.. .. ..-.+++.-. ++.||+.-.. .+.+++||+....-..+..... ..++++..++.+|+....
T Consensus 163 ~~-~~---~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~-----~P~gi~~d~~~lyva~~~- 227 (267)
T 1npe_A 163 QD-NL---GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGLQ-----YPFAVTSYGKNLYYTDWK- 227 (267)
T ss_dssp CT-TC---SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECCC-----SEEEEEEETTEEEEEETT-
T ss_pred EC-CC---CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCCC-----CceEEEEeCCEEEEEECC-
Confidence 11 11 1122333332 5678886432 3579999987643332211111 223556667889987432
Q ss_pred CCCCcceEEEEECCCCcEE
Q 010551 264 NNNGCQETIVLNMTKLAWS 282 (507)
Q Consensus 264 ~~~~~~~~~~~d~~~~~W~ 282 (507)
.+.++++|+.+.+..
T Consensus 228 ----~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 228 ----TNSVIAMDLAISKEM 242 (267)
T ss_dssp ----TTEEEEEETTTTEEE
T ss_pred ----CCeEEEEeCCCCCce
Confidence 246899999877644
No 330
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=80.85 E-value=30 Score=35.98 Aligned_cols=107 Identities=10% Similarity=0.033 Sum_probs=53.8
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCC---CCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 118 IVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRS---RKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 118 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~---~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
.++++|+.+++-..+........ .......+ +++.++++..+.. ..+...++++|+.+.+-..+..... ...
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~--~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~ 114 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIES--LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV-SNA 114 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTT--TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC-CSC
T ss_pred CEEEEECCCCcEEEEeccccccc--cccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc-ccc
Confidence 48899998887655542111100 01222333 4554555543321 1234789999999887655543211 001
Q ss_pred CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEec
Q 010551 193 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 193 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
... ..+.-.++..++++.. ++++++|+.++....+
T Consensus 115 ~~~-~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 115 KLQ-YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp CCS-BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEE
T ss_pred ccc-ccEECCCCCEEEEEEC------CeEEEEECCCCceEEE
Confidence 111 1122223334444432 3788998888766554
No 331
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=80.04 E-value=2.5 Score=27.62 Aligned_cols=26 Identities=12% Similarity=0.153 Sum_probs=12.4
Q ss_pred HHhhHHHhhhhhhhhHHHHHHHHHHH
Q 010551 436 VQGQLVAERSRCFKLEAQIAELQKML 461 (507)
Q Consensus 436 ~~~~~~~~~~~~~~~e~~~~e~~~~~ 461 (507)
.+.+++.++.++..|+.+++|++.++
T Consensus 24 Lk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 24 LRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444455555554444443
No 332
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=79.44 E-value=41 Score=34.98 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=66.9
Q ss_pred cceEEEEECCCCcE---EEeecCCCCCC---CCc-CcEEEEE--CCEEEEEcCCCCCCCccCcEEEEE----CCCCcEEE
Q 010551 116 SMIVRFIDLETNLC---GVMETSGKVPV---TRG-GHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLD----LETMTWDA 182 (507)
Q Consensus 116 ~~~~~~yd~~t~~W---~~~~~~g~~p~---~r~-~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d----~~t~~W~~ 182 (507)
...++++|+.++.- ..+. .|. ... ....+.+ ++++++....... ....++.+| +.++++..
T Consensus 223 ~~~l~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~--~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 223 VVRIFIIDTTYPAYVGPQEVP----VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQ--NVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp EEEEEEEESSCHHHHCCEECC----CCHHHHTSCEEEEEEEESSSSEEEEEEEESST--TEEEEEEEEECSSSSSEECCG
T ss_pred eeEEEEEECCCCCccceeEcc----CCccCCCCcceEEEeEEeCCCeEEEEEecccc--CeEEEEEEcccCCCCCCceEE
Confidence 34788899888752 2332 111 111 1122222 4566555221111 135689999 77776654
Q ss_pred ecc---CCCCCCCCCC---c-eEEEE-cCCEEEEE-cCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEEC
Q 010551 183 VEV---TQTPPAPRYD---H-SAALH-ANRYLIVF-GGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITID 253 (507)
Q Consensus 183 ~~~---~~~~p~~r~~---~-~~~~~-~~~~l~v~-GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 253 (507)
+.. .+. . .... + ..+.. +++.+++. ...++ ...++.+|+.++....+.. +.. . ....... +
T Consensus 297 ~~~~~~~~~-~-~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~l~~~~~~~~~~~~lt~-~~~--~-v~~~~~~-d 366 (719)
T 1z68_A 297 TQEHIEESR-T-GWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKHIHYIKDTVENAIQITS-GKW--E-AINIFRV-T 366 (719)
T ss_dssp GGEEEEECS-S-SCSSSSSCCCCEECTTSSCEEEEEECTTS---CEEEEEESSCSTTCEECSC-SSS--C-EEEEEEE-C
T ss_pred EEecccccC-C-ceEccccCCccEECCCCCeEEEEEEccCC---ceEEEEEECCCCceEeccc-Cce--E-EEEEEEE-e
Confidence 431 111 0 1111 0 22222 33434443 32222 3579999988877655421 111 0 1111222 5
Q ss_pred CeEEEEeccC--CCCCcceEEEEECCCC
Q 010551 254 ENWYIVGGGD--NNNGCQETIVLNMTKL 279 (507)
Q Consensus 254 ~~l~v~GG~~--~~~~~~~~~~~d~~~~ 279 (507)
+..+++.+.. .......+|..++.+.
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred CCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 5444444332 2223456888887554
No 333
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=79.43 E-value=24 Score=28.81 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=10.3
Q ss_pred HHHHHhhHHHhhhhhhhhHHHHHHHHHH
Q 010551 433 LSSVQGQLVAERSRCFKLEAQIAELQKM 460 (507)
Q Consensus 433 l~~~~~~~~~~~~~~~~~e~~~~e~~~~ 460 (507)
+......+..-..|....++.++.+++.
T Consensus 79 Ik~L~~kLKEAE~RAE~AERsv~kLEk~ 106 (155)
T 2efr_A 79 IKVLSDKLKEAETRAEFAERSVTKLEKS 106 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333333
No 334
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=79.04 E-value=12 Score=28.18 Aligned_cols=24 Identities=17% Similarity=0.374 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 466 TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.+..++..+++++..+.++++.++
T Consensus 71 ~~~~klr~Yk~dL~~lk~elk~~~ 94 (102)
T 1vcs_A 71 MYSNRMRSYKQEMGKLETDFKRSR 94 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666778888888888888876544
No 335
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=78.96 E-value=45 Score=31.66 Aligned_cols=73 Identities=5% Similarity=-0.089 Sum_probs=40.2
Q ss_pred cCCEEEEEcCCCC----CCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE-CCe-EEEEeccCCCCCcceEEEEE
Q 010551 202 ANRYLIVFGGCSH----SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN-WYIVGGGDNNNGCQETIVLN 275 (507)
Q Consensus 202 ~~~~l~v~GG~~~----~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d 275 (507)
+++.+|+...... ....++++++|+.+++-..- .|.+...+.++.. +++ +++++... .+++.++|
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~-----i~~g~~p~~i~~s~Dg~~~l~v~~~~----~~~V~ViD 347 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ-----ISLGHDVDAISVAQDGGPDLYALSAG----TEVLHIYD 347 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE-----EECCCCcCeEEECCCCCeEEEEEcCC----CCeEEEEE
Confidence 3467888654211 12357899999998776431 1222223344443 333 44333211 25799999
Q ss_pred CCCCcEEE
Q 010551 276 MTKLAWSI 283 (507)
Q Consensus 276 ~~~~~W~~ 283 (507)
+.+.+-..
T Consensus 348 ~~t~~vv~ 355 (373)
T 2mad_H 348 AGAGDQDQ 355 (373)
T ss_pred CCCCCEEe
Confidence 98876443
No 336
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=78.91 E-value=15 Score=32.03 Aligned_cols=13 Identities=15% Similarity=0.186 Sum_probs=5.5
Q ss_pred HHHHHHHHHHhHH
Q 010551 453 QIAELQKMLESSQ 465 (507)
Q Consensus 453 ~~~e~~~~~~~~~ 465 (507)
-+-|++.++++++
T Consensus 183 lLNeKK~KIR~lq 195 (213)
T 1ik9_A 183 VLNEKKTKIRSLH 195 (213)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHH
Confidence 3334444444444
No 337
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=78.88 E-value=9.9 Score=28.71 Aligned_cols=21 Identities=0% Similarity=0.113 Sum_probs=8.9
Q ss_pred HHHHHHHHhHHHHHHHHHHhh
Q 010551 469 NEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 469 ~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.++..++..+..+.+++-+..
T Consensus 69 ~~Vs~lq~KiaeLKrqLAd~v 89 (113)
T 4fi5_A 69 GVAVSIQAKIDELKRQLADRI 89 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444333
No 338
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=78.76 E-value=2.6 Score=39.31 Aligned_cols=24 Identities=8% Similarity=0.239 Sum_probs=9.7
Q ss_pred HHhhHHHhhhhhhhhHHHHHHHHH
Q 010551 436 VQGQLVAERSRCFKLEAQIAELQK 459 (507)
Q Consensus 436 ~~~~~~~~~~~~~~~e~~~~e~~~ 459 (507)
++..++.++.++.+|++++.+++.
T Consensus 31 L~~~l~~~~~~i~~l~~~i~~l~~ 54 (323)
T 1lwu_C 31 LSEMWRVNQQFVTRLQQQLVDIRQ 54 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444444444444333
No 339
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=78.44 E-value=21 Score=34.39 Aligned_cols=12 Identities=8% Similarity=0.146 Sum_probs=5.3
Q ss_pred hhhhhHHHHHHh
Q 010551 411 ENSRFREKIDEV 422 (507)
Q Consensus 411 ~~~~l~~~l~~~ 422 (507)
+..+|.+.++..
T Consensus 56 ~v~~Lvk~iq~~ 67 (409)
T 1m1j_C 56 SIEYLIQHIKTI 67 (409)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 344444444444
No 340
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=78.35 E-value=41 Score=30.84 Aligned_cols=187 Identities=11% Similarity=-0.062 Sum_probs=89.8
Q ss_pred CCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCC------------CccCCceEEEEccCCceeeec
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRN------------GRFLSDVQVFDLRSLAWSNLR 69 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~------------~~~~~~~~~~d~~~~~W~~~~ 69 (507)
+++.+|+.....+.+.....-........+++- ++.||+.-.... ......+++||+.++....+.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 456777766655555421000001122333333 467888642210 112356999999887765443
Q ss_pred cccccCCCccccCCCcCCCCCccceeEEEE-C-CEEEEEeccCCCCCCcceEEEEECCC---CcEEEeecCCCCCCCCcC
Q 010551 70 LETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKKSSDSMIVRFIDLET---NLCGVMETSGKVPVTRGG 144 (507)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~yd~~t---~~W~~~~~~g~~p~~r~~ 144 (507)
... ..-..++.. + +.||+.-.. ...+++|++.+ +..+.+. ..+.
T Consensus 182 ~~~------------------~~p~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~---~~~g---- 230 (322)
T 2fp8_A 182 KEL------------------HVPGGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLV---KIPN---- 230 (322)
T ss_dssp EEE------------------SCCCEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEE---ECSS----
T ss_pred cCC------------------ccCcceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEE---eCCC----
Confidence 211 111233333 2 457776322 34699999875 3444433 1221
Q ss_pred cEEEEE--CCEEEEEcCCCCCC----CccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCC
Q 010551 145 HSVTLV--GSRLIIFGGEDRSR----KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFF 218 (507)
Q Consensus 145 ~~~~~~--~~~iy~~GG~~~~~----~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~ 218 (507)
..-..+ ++.||+........ ...+.+.+||+....-..+......+ ....+.+...++.|||.+.. .
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~--~~~~~~~~~~~g~L~v~~~~-----~ 303 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA--GEHFEQIQEHDGLLYIGTLF-----H 303 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT--TSCCCEEEEETTEEEEECSS-----C
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc--cccceEEEEeCCEEEEeecC-----C
Confidence 112233 35777764321000 01346899998755444454321111 12233344467778875432 2
Q ss_pred CcEEEEECCC
Q 010551 219 NDLHVLDLQT 228 (507)
Q Consensus 219 ~~i~~~d~~~ 228 (507)
+.|.+|++..
T Consensus 304 ~~i~~~~~~~ 313 (322)
T 2fp8_A 304 GSVGILVYDK 313 (322)
T ss_dssp SEEEEEEC--
T ss_pred CceEEEeccc
Confidence 4688887653
No 341
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=78.14 E-value=5.1 Score=25.24 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=26.2
Q ss_pred hhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHH
Q 010551 413 SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 413 ~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~ 454 (507)
.+|-++++.++.++.-+++||+.--.++.+++.+...+++-+
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevl 47 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVL 47 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHH
Confidence 345566677777777777777776666666655555544333
No 342
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=78.11 E-value=21 Score=31.20 Aligned_cols=107 Identities=22% Similarity=0.337 Sum_probs=55.7
Q ss_pred ccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCC-cE-----EEeec-CCCCCCC--CcCcEEEE-E--CCEEEEEc
Q 010551 91 MSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETN-LC-----GVMET-SGKVPVT--RGGHSVTL-V--GSRLIIFG 158 (507)
Q Consensus 91 r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~-~W-----~~~~~-~g~~p~~--r~~~~~~~-~--~~~iy~~G 158 (507)
....+. ..++++|+|-|. .+|+|+..++ +- +.+.. .| +|.. ....-++. . ++++|+|-
T Consensus 64 ~IDAA~-~~~~~~yfFkG~--------~yw~~~~~~~~~~~~gyPk~i~~~~G-~p~~~~~~~IDAA~~~~~~gk~yfFk 133 (219)
T 1hxn_A 64 TVDAAF-SWEDKLYLIQDT--------KVYVFLTKGGYTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMA 133 (219)
T ss_dssp SCSEEE-EETTEEEEEETT--------EEEEEECSSSCEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEE
T ss_pred CccEEE-EECCcEEEecCC--------EEEEEeCCCCceecCCCCeehhhccC-CCCcccccccceeEEecCCCEEEEEe
Confidence 344333 348999999763 3899986542 11 11211 12 3332 11222333 2 46999998
Q ss_pred CCCCCCCccCcEEEEECCCC---cEEEeccCCCCCCCCCCceEEE----------E-cCCEEEEEcCCCCCCCCCcEEEE
Q 010551 159 GEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPPAPRYDHSAAL----------H-ANRYLIVFGGCSHSIFFNDLHVL 224 (507)
Q Consensus 159 G~~~~~~~~n~~~~~d~~t~---~W~~~~~~~~~p~~r~~~~~~~----------~-~~~~l~v~GG~~~~~~~~~i~~~ 224 (507)
|. ..|+||..+. .|.... .++.... ++.. . .++.+|+|-| +..|+|
T Consensus 134 G~--------~ywr~d~~~~P~~i~~~~~----g~p~~vd-Aa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~ 193 (219)
T 1hxn_A 134 GR--------RLWWLDLKSGAQATWTELP----WPHEKVD-GALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCY 193 (219)
T ss_dssp TT--------EEEEEEGGGGGGCCCEEEC----CSCSCCS-EEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEE
T ss_pred CC--------EEEEEeCCCCceEhhhcCC----CCCCCcC-EEEEccccccccceeccCCeEEEEEC-------CEEEEE
Confidence 83 4789987542 233221 1222223 3333 1 3456888877 357777
Q ss_pred ECC
Q 010551 225 DLQ 227 (507)
Q Consensus 225 d~~ 227 (507)
|..
T Consensus 194 ~~~ 196 (219)
T 1hxn_A 194 RHV 196 (219)
T ss_dssp SSH
T ss_pred eCC
Confidence 654
No 343
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=77.98 E-value=19 Score=35.64 Aligned_cols=9 Identities=22% Similarity=0.464 Sum_probs=5.6
Q ss_pred EECCEEEEE
Q 010551 149 LVGSRLIIF 157 (507)
Q Consensus 149 ~~~~~iy~~ 157 (507)
.+++++|.+
T Consensus 112 ~~dGk~Ygl 120 (471)
T 3mq9_A 112 RYNGKLIAY 120 (471)
T ss_dssp EETTEECEE
T ss_pred EECCEEEEE
Confidence 467777654
No 344
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=77.96 E-value=13 Score=31.25 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=7.8
Q ss_pred HHHhhHHHhhhhhhhhHHHH
Q 010551 435 SVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 435 ~~~~~~~~~~~~~~~~e~~~ 454 (507)
....+++.++++++.++.+.
T Consensus 38 ~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 38 TKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 33333334444444443333
No 345
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=77.13 E-value=4.7 Score=26.04 Aligned_cols=24 Identities=33% Similarity=0.493 Sum_probs=8.9
Q ss_pred HHHhhccchhHHHhHHHHHhhHHH
Q 010551 419 IDEVNSTHSELSKELSSVQGQLVA 442 (507)
Q Consensus 419 l~~~~~~~~e~~~el~~~~~~~~~ 442 (507)
+..+...++.+..-|+.-++++..
T Consensus 18 l~~L~~rN~rL~~~L~~AR~el~~ 41 (51)
T 3m91_A 18 IDSLAARNSKLMETLKEARQQLLA 41 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333
No 346
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=76.99 E-value=10 Score=26.31 Aligned_cols=30 Identities=13% Similarity=0.349 Sum_probs=14.9
Q ss_pred hHHHHHHhhccchhHHHhHHHHHhhHHHhh
Q 010551 415 FREKIDEVNSTHSELSKELSSVQGQLVAER 444 (507)
Q Consensus 415 l~~~l~~~~~~~~e~~~el~~~~~~~~~~~ 444 (507)
|+..++.+..+.+++.+.+...+++++..+
T Consensus 4 L~k~i~~l~~E~eel~~klk~~~ee~~~~~ 33 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKAEEEYKLEK 33 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555554444444433
No 347
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=76.96 E-value=22 Score=27.10 Aligned_cols=15 Identities=13% Similarity=0.162 Sum_probs=5.6
Q ss_pred HHHHHHHhHHHHHHH
Q 010551 470 EVQILRQQKSAFEQE 484 (507)
Q Consensus 470 e~~~~~~~~~~~~~~ 484 (507)
++..+.++++.++.+
T Consensus 86 ~i~~l~~~~~~l~~~ 100 (112)
T 1l8d_A 86 RKSELERELRRIDME 100 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 348
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=76.85 E-value=16 Score=25.88 Aligned_cols=17 Identities=35% Similarity=0.431 Sum_probs=7.2
Q ss_pred HHHHHHHhHHHHHHHHH
Q 010551 470 EVQILRQQKSAFEQEME 486 (507)
Q Consensus 470 e~~~~~~~~~~~~~~~~ 486 (507)
++..+++++...+.+++
T Consensus 55 El~~Lq~qLe~kd~ei~ 71 (81)
T 3qh9_A 55 EVAQLQEQVALKDAEIE 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHH
Confidence 34444444444444433
No 349
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=76.63 E-value=78 Score=33.32 Aligned_cols=142 Identities=12% Similarity=0.022 Sum_probs=69.2
Q ss_pred ceEEEEECCCCcEE-EeecCCCCCCCCcCcEEEEE--CC-EEEEEcCCCCCCCccCcEEEEECCCC--cE--EEeccCCC
Q 010551 117 MIVRFIDLETNLCG-VMETSGKVPVTRGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETM--TW--DAVEVTQT 188 (507)
Q Consensus 117 ~~~~~yd~~t~~W~-~~~~~g~~p~~r~~~~~~~~--~~-~iy~~GG~~~~~~~~n~~~~~d~~t~--~W--~~~~~~~~ 188 (507)
..++..++.++.=. .+...+ +.... .....+ ++ .|++..... ..++++.+|+.+. .+ ..+....
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~--~~~~~-~~~~~~SpDg~~l~~~~~~~----~~~~l~~~d~~~~~~~~~~~~l~~~~- 318 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEE--HNPLF-SAFMYKAADTNTLCIGSQSP----ETAEVHLLDLRKGNAHNTLEIVRPRE- 318 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEEC--CCTTC-EEEEEECTTSSEEEEEEECS----SCEEEEEEESSSCTTCCCEEESSCCC-
T ss_pred CEEEEEECCCCchhcEEEEec--CCCce-EEEEEECCCCCEEEEEecCC----CCceEEEEECCCCCCCceeEEeecCC-
Confidence 46888888776411 111111 11112 122222 33 555554322 2568999999875 46 5553211
Q ss_pred CCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC-CcEEe-cccCCCCCCCCCccEEEEECCeEEEEeccCCCC
Q 010551 189 PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQ-PEIKGDLVTGRAGHAGITIDENWYIVGGGDNNN 266 (507)
Q Consensus 189 ~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~-~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 266 (507)
....+......++.||+..-.+ ......|+.+|+.+ ..|.. +-. ... ..........++.+++..-. .
T Consensus 319 ---~~~~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~--~~~-~~~l~~~~~~~~~lv~~~~~---~ 388 (751)
T 2xe4_A 319 ---KGVRYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVD--HSE-DVFMESIAVRSNYLVVAGRR---A 388 (751)
T ss_dssp ---TTCCEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEEC--CCS-SEEEEEEEECSSEEEEEEEE---T
T ss_pred ---CCceEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEEC--CCC-CcEEEEEEEECCEEEEEEEe---C
Confidence 0111121113467788776543 12234799999876 57765 321 111 11112233345666665432 2
Q ss_pred CcceEEEEEC
Q 010551 267 GCQETIVLNM 276 (507)
Q Consensus 267 ~~~~~~~~d~ 276 (507)
....++++|+
T Consensus 389 g~~~l~~~dl 398 (751)
T 2xe4_A 389 GLTRIWTMMA 398 (751)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 3457888986
No 350
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=76.36 E-value=11 Score=27.14 Aligned_cols=15 Identities=13% Similarity=0.282 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHhH
Q 010551 464 SQTIENEVQILRQQK 478 (507)
Q Consensus 464 ~~~le~e~~~~~~~~ 478 (507)
++.+|+++....+.+
T Consensus 60 i~~le~~i~rhk~~i 74 (84)
T 1gmj_A 60 IERLQKEIERHKQSI 74 (84)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333334443333333
No 351
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=76.35 E-value=47 Score=30.50 Aligned_cols=160 Identities=9% Similarity=0.123 Sum_probs=72.8
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
.+ +++.||.+. .+.+||+.++.+...... ..........++.+ ++.+++.|+.+. .+.++|+..
T Consensus 24 ~~-~las~~~D~------~i~lw~~~~~~~~~~~~~-~~~~h~~~v~~v~~sp~~~~las~s~D~------~v~iw~~~~ 89 (330)
T 2hes_X 24 QG-ILATGSTDR------KIKLVSVKYDDFTLIDVL-DETAHKKAIRSVAWRPHTSLLAAGSFDS------TVSIWAKEE 89 (330)
T ss_dssp TT-EEEEEESSS------CEEEEECSSSCCEEEEEE-CTTCCCSCEEEEEECTTSSEEEEEETTS------CEEEEEC--
T ss_pred CC-EEEEEcCCC------EEEEEEecCCCeEEEEEE-ecCCccCCEEEEEECCCCCEEEEEeCCC------cEEEEEccc
Confidence 44 566665432 388888887655443321 00001112223333 456777777653 477777743
Q ss_pred C-----cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC--CcEEecccCCCCCCCCCccEEE
Q 010551 178 M-----TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEIKGDLVTGRAGHAGI 250 (507)
Q Consensus 178 ~-----~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~ 250 (507)
. .+..+..... ....-.+++...++.+++.|+.++ .+.++|+.. ..+..+.... .....-..+
T Consensus 90 ~~~~~~~~~~~~~~~~--h~~~V~~v~~sp~g~~las~s~D~-----~v~iwd~~~~~~~~~~~~~~~---~h~~~v~~v 159 (330)
T 2hes_X 90 SADRTFEMDLLAIIEG--HENEVKGVAWSNDGYYLATCSRDK-----SVWIWETDESGEEYECISVLQ---EHSQDVKHV 159 (330)
T ss_dssp -----CCCEEEEEEC------CEEEEEECTTSCEEEEEETTS-----CEEEEECCTTCCCCEEEEEEC---CCSSCEEEE
T ss_pred CcCccccceeEEEEcC--CCCcEEEEEECCCCCEEEEEeCCC-----EEEEEeccCCCCCeEEEEEec---cCCCceEEE
Confidence 2 2222211000 001111222234555677776543 578888742 2333321111 111111222
Q ss_pred EE--CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccCC
Q 010551 251 TI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 288 (507)
Q Consensus 251 ~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~ 288 (507)
.+ ++.+++.|+.++ .+.++|..+..|..+..+.
T Consensus 160 ~~~p~~~~l~s~s~D~-----~i~iW~~~~~~~~~~~~~~ 194 (330)
T 2hes_X 160 IWHPSEALLASSSYDD-----TVRIWKDYDDDWECVAVLN 194 (330)
T ss_dssp EECSSSSEEEEEETTS-----CEEEEEEETTEEEEEEEEC
T ss_pred EECCCCCEEEEEcCCC-----eEEEEECCCCCeeEEEEcc
Confidence 22 456777776543 3667777776676655443
No 352
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=76.08 E-value=36 Score=29.03 Aligned_cols=151 Identities=13% Similarity=0.102 Sum_probs=81.6
Q ss_pred eEEEECCEEEEEeccCCCCCCcceEEEEECCCC--cEEEeecC---CCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCcc
Q 010551 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETS---GKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLL 167 (507)
Q Consensus 95 ~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~---g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~ 167 (507)
+++.+++++|+|=|.. +|+++.... ........ ..+|... . ++... ++++|+|-|.
T Consensus 11 Ai~~~~g~~yfFkg~~--------~Wr~~~~~~~~~~~p~~Is~~w~glP~~I-D-Aa~~~~~~~~~yfFkG~------- 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKDGK--------YWRFSEGRGSRPQGPFLIADKWPALPRKL-D-SVFEEPLSKKLFFFSGR------- 73 (195)
T ss_dssp EEEEETTEEEEEETTE--------EEEECCSSSCCCEEEEEHHHHCTTSCSSC-S-EEEECTTTCCEEEEETT-------
T ss_pred EEEEeCCEEEEEECCE--------EEEEECCccccCCCcEEhhhccCCCCCCc-c-EEEEECCCCeEEEEeCC-------
Confidence 3455799999997642 788876552 22222111 1234321 1 22222 5789999883
Q ss_pred CcEEEEECCCCcE-EEeccCCCCCCC-CCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-----cc-cCCC
Q 010551 168 NDVHFLDLETMTW-DAVEVTQTPPAP-RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PE-IKGD 239 (507)
Q Consensus 168 n~~~~~d~~t~~W-~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~-~~~~ 239 (507)
..|+|+..+..- ..+..-| +|.. ..--++....++++|+|-| +..|+||..+.+-.. +. .-..
T Consensus 74 -~yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 74 -QVWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp -EEEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred -EEEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCC
Confidence 467777542111 1111112 2321 1222333345678999977 478999987764321 10 0011
Q ss_pred CCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 240 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 240 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
+| ..-.++...++.+|+|-| +..|.||..+..
T Consensus 145 vp--~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 145 VP--LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp SC--SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred CC--CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 22 233455666789999976 257888877665
No 353
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=75.86 E-value=15 Score=27.47 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=10.6
Q ss_pred HHHhHHHHHhhHHHhhhhhhhhHHHH
Q 010551 429 LSKELSSVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 429 ~~~el~~~~~~~~~~~~~~~~~e~~~ 454 (507)
+++++...+.+.+.++++...||.++
T Consensus 17 lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 17 LRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444333
No 354
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=75.39 E-value=21 Score=34.74 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=9.0
Q ss_pred HHhhhhHHHHhhhhhhHHHHHHhhc
Q 010551 400 VLELSLTEVRTENSRFREKIDEVNS 424 (507)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~l~~~~~ 424 (507)
+++..+.+.........+.+..++.
T Consensus 99 ~Le~~l~~isn~Ts~a~~~v~~ik~ 123 (461)
T 3ghg_B 99 ELNNNVEAVSQTSSSSFQYMYLLKD 123 (461)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3333333333333333333333333
No 355
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=75.09 E-value=17 Score=30.55 Aligned_cols=14 Identities=21% Similarity=0.363 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHhHH
Q 010551 466 TIENEVQILRQQKS 479 (507)
Q Consensus 466 ~le~e~~~~~~~~~ 479 (507)
++.+|+.+++.++.
T Consensus 117 aL~~Ei~~Lr~qL~ 130 (175)
T 3lay_A 117 AVAKEMESLGQKLD 130 (175)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444444333
No 356
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=74.92 E-value=25 Score=26.55 Aligned_cols=15 Identities=0% Similarity=0.275 Sum_probs=5.7
Q ss_pred hHHHHHHhhccchhH
Q 010551 415 FREKIDEVNSTHSEL 429 (507)
Q Consensus 415 l~~~l~~~~~~~~e~ 429 (507)
++++++.+..+++.+
T Consensus 13 lq~~~~~l~~q~~~l 27 (107)
T 1fxk_A 13 LQQQAQAISVQKQTV 27 (107)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 357
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=74.86 E-value=30 Score=28.18 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010551 451 EAQIAELQKMLESSQTIENEVQILRQQK 478 (507)
Q Consensus 451 e~~~~e~~~~~~~~~~le~e~~~~~~~~ 478 (507)
+.++.+.++.+...+....++.+..+++
T Consensus 113 ~~~l~e~e~~leeyK~Kl~rv~~vkkeL 140 (152)
T 4fla_A 113 KDVLSEKEKKLEEYKQKLARVTQVRKEL 140 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333343433333333333333333
No 358
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=74.70 E-value=7.8 Score=37.61 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=12.8
Q ss_pred HHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 433 LSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 433 l~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
++.++++..++++.+++++.+++++++++.+.
T Consensus 12 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 43 (403)
T 4etp_A 12 IAALKEKIAALKEKIKDTELGMKELNEILIKE 43 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444444444444443333
No 359
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=74.60 E-value=20 Score=25.37 Aligned_cols=15 Identities=20% Similarity=0.302 Sum_probs=5.8
Q ss_pred HhhhhhhhhHHHHHH
Q 010551 442 AERSRCFKLEAQIAE 456 (507)
Q Consensus 442 ~~~~~~~~~e~~~~e 456 (507)
++++.+.+++++..+
T Consensus 43 KL~~mi~~l~~E~~~ 57 (78)
T 3iv1_A 43 KLEEMVTRLDQEVAE 57 (78)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333444433333
No 360
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=74.54 E-value=20 Score=25.30 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=5.6
Q ss_pred HHHHHHhHHHHHHHH
Q 010551 471 VQILRQQKSAFEQEM 485 (507)
Q Consensus 471 ~~~~~~~~~~~~~~~ 485 (507)
+..++..+..+.+++
T Consensus 54 V~~lq~Ki~elkrql 68 (78)
T 2ic6_A 54 VSALETKLGELKREL 68 (78)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 361
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=74.52 E-value=25 Score=26.46 Aligned_cols=57 Identities=9% Similarity=0.121 Sum_probs=28.0
Q ss_pred hhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHH
Q 010551 427 SELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 427 ~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~ 485 (507)
++..+.+.+++..+++-++-+.+++-+++.+-- .....+..++..++++++.+.+++
T Consensus 45 e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~--s~R~~~~~klr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 45 EEKKKLVRDFDEKQQEANETLAEMEEELRYAPL--TFRNPMMSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333344444544444444444444433333221 111256667777777777666654
No 362
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=74.31 E-value=5.9 Score=22.69 Aligned_cols=27 Identities=22% Similarity=0.323 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010551 464 SQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
+.+||.+.+++.++++.++.+.++++.
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 345666666666666666666655443
No 363
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=74.02 E-value=70 Score=31.38 Aligned_cols=218 Identities=12% Similarity=-0.034 Sum_probs=95.8
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCC----cEEEeecCCCC--CCCC-cCcE-EEEECCEEEEEcCCCCCCCccCcEE
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETN----LCGVMETSGKV--PVTR-GGHS-VTLVGSRLIIFGGEDRSRKLLNDVH 171 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~~~~g~~--p~~r-~~~~-~~~~~~~iy~~GG~~~~~~~~n~~~ 171 (507)
.++||+-|..+ +.++++|+.++ +-.+....... +.+. .-|. .+.-++ |||-.-.+......+.+.
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 56677766543 45999999876 32221100000 0011 1122 223345 666322122223457899
Q ss_pred EEECCCCcEEEeccCCCCCCCCCCceEEEE-cCCEEEEEc---------CCCCC----CCCCcEEEEECCCCcEEecccC
Q 010551 172 FLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFG---------GCSHS----IFFNDLHVLDLQTNEWSQPEIK 237 (507)
Q Consensus 172 ~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~G---------G~~~~----~~~~~i~~~d~~~~~W~~~~~~ 237 (507)
++|..|++-..--..+..|. -..+.+-.. +.+.+|+-- |.... ...+.|++||+.+++-...-..
T Consensus 168 vlD~~T~~v~~~~~~~~~~~-~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQ-YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EECTTTCCEEEECCSBCTTC-CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEECCCCeEEEEEccCCCCc-cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 99999876433322222221 112222222 334344331 12111 3457899999988743331111
Q ss_pred CC-CCCCCCccEEEEE---CCeEEEEeccCCCCCcceEEEEECCCCcEEEeccC--CC-----CCC-CCC-----CCCce
Q 010551 238 GD-LVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV--KG-----RNP-LAS-----EGLSV 300 (507)
Q Consensus 238 ~~-~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~--~~-----~~~-~~~-----~~~~~ 300 (507)
+. -..|| |....+ +..+||..-.+.....+.+++|......|..+..+ +. ..| .+. .....
T Consensus 247 g~~g~~P~--~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 247 GEENRMAL--ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp CTTEEEEE--EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred CCCCCccc--eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 10 00111 111111 23566665422222334565554445677654321 11 001 000 11222
Q ss_pred EEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 301 CSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 301 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
...+..++.+|||. +...+.+.+||+.
T Consensus 325 ~I~lS~DGrfLYVS----nrg~d~VavfdV~ 351 (462)
T 2ece_A 325 DIDISLDDKFLYLS----LWGIGEVRQYDIS 351 (462)
T ss_dssp CEEECTTSCEEEEE----ETTTTEEEEEECS
T ss_pred EEEECCCCCEEEEE----eCCCCEEEEEEec
Confidence 33344445677773 2235789999985
No 364
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=73.75 E-value=23 Score=26.68 Aligned_cols=17 Identities=12% Similarity=0.073 Sum_probs=6.9
Q ss_pred hhhhHHHHHHhhccchh
Q 010551 412 NSRFREKIDEVNSTHSE 428 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e 428 (507)
...+..+++.++.++.+
T Consensus 17 ~~~l~~q~~~l~~~~~e 33 (107)
T 1fxk_A 17 AQAISVQKQTVEMQINE 33 (107)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444433
No 365
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=73.72 E-value=5.4 Score=22.78 Aligned_cols=27 Identities=19% Similarity=0.147 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010551 464 SQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
+.+||.+.+++.+++..++.|..+.+.
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 345666666666666666666655443
No 366
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=73.57 E-value=34 Score=27.59 Aligned_cols=49 Identities=14% Similarity=0.202 Sum_probs=24.8
Q ss_pred hhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHH
Q 010551 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQK 459 (507)
Q Consensus 411 ~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~ 459 (507)
+...++..+..++.++++..+.++.++.+++.++-....++..+..+++
T Consensus 76 El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~ 124 (152)
T 3a7p_A 76 ELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKK 124 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555555555555555554444444444444333
No 367
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=73.33 E-value=29 Score=26.64 Aligned_cols=21 Identities=10% Similarity=0.313 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~ 486 (507)
.+++++..++++...+...+.
T Consensus 88 ~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 88 ALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555544
No 368
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=73.32 E-value=10 Score=30.78 Aligned_cols=31 Identities=13% Similarity=0.039 Sum_probs=13.2
Q ss_pred HhhHHHhhhhhhhhHHHHHHHHHHHHhHHHH
Q 010551 437 QGQLVAERSRCFKLEAQIAELQKMLESSQTI 467 (507)
Q Consensus 437 ~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~l 467 (507)
+.+.+..++++++.+++++|+..|.--.+.|
T Consensus 11 e~Ek~~~~~rI~~K~~~LqeL~~Q~vafknL 41 (155)
T 2aze_A 11 EVERQRRLERIKQKQSQLQELILQQIAFKNL 41 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444433333333
No 369
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=72.99 E-value=39 Score=33.04 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~ 486 (507)
+.++++..++.++..-++++.
T Consensus 77 kY~~~~AeY~~kl~aYe~~~~ 97 (497)
T 3iox_A 77 KYQKDLADYPVKLKAYEDEQT 97 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555554444443
No 370
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=72.91 E-value=59 Score=29.98 Aligned_cols=222 Identities=10% Similarity=0.067 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCc
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 116 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 116 (507)
++.+++.|+.+ ..+.++|+.++.....-..... ........-++..++.||.+..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h~~----------------~v~~v~~sp~~~~l~s~~~d~~---- 141 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGHQS----------------EVYSVAFSPDNRQILSAGAERE---- 141 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEECCCS----------------CEEEEEECSSTTEEEEEETTSC----
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCC----------------cEEEEEECCCCCEEEEEcCCCE----
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECC------------EEEEEcCCCCCCCccCcEEEEECCCCcEEEec
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGS------------RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~------------~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~ 184 (507)
+.+||.....-.... ..........++.+.. .+++.|+.++. +.+||.....-..+
T Consensus 142 --i~~wd~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~------i~iwd~~~~~~~~~- 209 (343)
T 2xzm_R 142 --IKLWNILGECKFSSA---EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR------LKVWNTNFQIRYTF- 209 (343)
T ss_dssp --EEEEESSSCEEEECC---TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE------EEEEETTTEEEEEE-
T ss_pred --EEEEeccCCceeeee---cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE------EEEEcCCCceeEEE-
Q ss_pred cCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCC
Q 010551 185 VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN 264 (507)
Q Consensus 185 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 264 (507)
......-.+++...++.+++.|+.+ ..+.+||+....-.. ........-.+++...+.-++++|.+.
T Consensus 210 ----~~h~~~v~~~~~s~~g~~l~sgs~d-----g~v~iwd~~~~~~~~----~~~~~~~~v~~v~~sp~~~~la~~~d~ 276 (343)
T 2xzm_R 210 ----KAHESNVNHLSISPNGKYIATGGKD-----KKLLIWDILNLTYPQ----REFDAGSTINQIAFNPKLQWVAVGTDQ 276 (343)
T ss_dssp ----ECCSSCEEEEEECTTSSEEEEEETT-----CEEEEEESSCCSSCS----EEEECSSCEEEEEECSSSCEEEEEESS
T ss_pred ----cCccccceEEEECCCCCEEEEEcCC-----CeEEEEECCCCcccc----eeecCCCcEEEEEECCCCCEEEEECCC
Q ss_pred CCCcceEEEEECCCCcEEEeccCC-----------CCCCCCCCCCceEEEEEcCceEEEEEccCCC
Q 010551 265 NNGCQETIVLNMTKLAWSILTSVK-----------GRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 319 (507)
Q Consensus 265 ~~~~~~~~~~d~~~~~W~~v~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~ 319 (507)
. +.+||+.+..-..+..+. +. ......+....+...++.|+.++
T Consensus 277 ~-----v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~sp~g~~l~sg~~Dg 331 (343)
T 2xzm_R 277 G-----VKIFNLMTQSKAPVCTIEAEPITKAEGQKGK------NPQCTSLAWNALGKKLFAGFTDG 331 (343)
T ss_dssp C-----EEEEESSSCCSCSEEECCCCSGGGBTTBCCS------CCCEEEEEECSSSCCEEEEETTS
T ss_pred C-----EEEEEeCCCCCCceEEeecCcchhhhhhcCC------CCceEEEEECCCCCeEEEecCCc
No 371
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=72.91 E-value=66 Score=30.55 Aligned_cols=156 Identities=10% Similarity=0.131 Sum_probs=79.7
Q ss_pred eEEEECCEEEEEeccCCCCCCcceEEEEECCCCcE--EEeecC-CCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCc
Q 010551 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLC--GVMETS-GKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 95 ~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~~~-g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~ 169 (507)
+++.+++++|+|=|.. +|+++.....- ..+... ..+|.. .. ++... ++++|+|-|. .
T Consensus 185 Av~~~~g~~~fFkg~~--------~Wr~~~~~~~~~p~~I~~~wpgLP~~-iD-Aa~~~~~~g~~~fFkg~--------~ 246 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDRF--------FWLKVSERPKTSVNLISSLWPTLPSG-IE-AAYEIEARNQVFLFKDD--------K 246 (365)
T ss_dssp CEEEETTEEEEEETTE--------EEECCSSCCCCCEEEHHHHCSSCCSS-CC-EEEEEGGGTEEEEEETT--------E
T ss_pred eEEEcCCeEEEEeCCE--------EEEEcCCCccCCccchhhhccCCCCC-cc-EEEEecCCCEEEEEeCC--------E
Confidence 3455689999996632 66665443221 111110 123422 22 23333 6899999773 3
Q ss_pred EEEEECCCCc--E-EEeccCCCCCCC-CCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe--cccC-CCC-
Q 010551 170 VHFLDLETMT--W-DAVEVTQTPPAP-RYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ--PEIK-GDL- 240 (507)
Q Consensus 170 ~~~~d~~t~~--W-~~~~~~~~~p~~-r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~--~~~~-~~~- 240 (507)
.|+|+..... + ..+...| +|.. ..--++... .++++|+|-| +..|+||..+..-.. +... ...
T Consensus 247 yWr~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~ 318 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQ 318 (365)
T ss_dssp EEECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHST
T ss_pred EEEEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCC
Confidence 5666543211 1 1222111 2321 122233333 3578999977 479999987654322 1000 001
Q ss_pred CCCCCccEEEEE-CCeEEEEeccCCCCCcceEEEEECCCCcEEE
Q 010551 241 VTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 241 p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
..+..-.++... ++++|+|=| +..|.||..+.+-..
T Consensus 319 g~p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 319 GIGPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp TCCSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 112223344555 778999866 358899988876554
No 372
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=72.80 E-value=68 Score=30.81 Aligned_cols=148 Identities=19% Similarity=0.169 Sum_probs=0.0
Q ss_pred ccceEEEE-CCEEEEEc----CCCCCccCCceEEEEccC----CceeeeccccccCCCccccCCCcCCCCCccceeEEEE
Q 010551 29 YKHAAAVF-DQKLYIVG----GSRNGRFLSDVQVFDLRS----LAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW 99 (507)
Q Consensus 29 ~~~~~~~~-~~~iyi~G----G~~~~~~~~~~~~~d~~~----~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~ 99 (507)
..|++++. ++.||.|| |..+.....+...-.... .....+.. -..|+++..
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~--------------------G~~ht~~l~ 241 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC--------------------GWRHTISVS 241 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE--------------------CSSEEEEEE
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE--------------------CCCcEEEEc
Q ss_pred -CCEEEEEe-------ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECC-EEEEEc-------CCCCC
Q 010551 100 -GTKLLILG-------GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFG-------GEDRS 163 (507)
Q Consensus 100 -~~~lyv~G-------G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~G-------G~~~~ 163 (507)
++.+|.|| |.........-..+-.+.......+. .-..|+++...+ .+|.+| |....
T Consensus 242 ~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~-------~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~ 314 (406)
T 4d9s_A 242 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQIS-------GGWRHTMALTSDGKLYGWGWNKFGQVGVGNN 314 (406)
T ss_dssp TTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEE-------ECSSEEEEEETTSCEEEEECCTTSTTCSSSS
T ss_pred CCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEE-------ecCCEEEEEcCCCeEEEeeCCCCCCCCCCCC
Q ss_pred CCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEc
Q 010551 164 RKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 164 ~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 210 (507)
.....-..+--+.......+. .-..|++++..++.+|.+|
T Consensus 315 ~~~~~p~~v~~~~~~~v~~va-------~G~~hs~alt~~G~v~~wG 354 (406)
T 4d9s_A 315 LDQCSPVQVRFPDDQKVVQVS-------CGWRHTLAVTERNNVFAWG 354 (406)
T ss_dssp SCEEEEEEECCGGGCCEEEEE-------ECSSEEEEEETTSCEEEEE
T ss_pred CCCccCEEEeccCCCcEEEEE-------eCCCeEEEEeCCCCEEEec
No 373
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=72.48 E-value=24 Score=25.42 Aligned_cols=13 Identities=15% Similarity=0.302 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHhH
Q 010551 466 TIENEVQILRQQK 478 (507)
Q Consensus 466 ~le~e~~~~~~~~ 478 (507)
.|+.|+.-+++-+
T Consensus 65 ~Ld~EIatYRkLL 77 (84)
T 1gk4_A 65 ALDIEIATYRKLL 77 (84)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH
Confidence 5555555555543
No 374
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=71.87 E-value=1e+02 Score=32.25 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=53.0
Q ss_pred cEEEEECCC---C---cEEEeccCCCC-CCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc--EEecccCC-
Q 010551 169 DVHFLDLET---M---TWDAVEVTQTP-PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKG- 238 (507)
Q Consensus 169 ~~~~~d~~t---~---~W~~~~~~~~~-p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~- 238 (507)
.++++|+.+ + +...+...... ..........-..+++++++--... .....|+++|+.+++ |.......
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRI-QNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS-TTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-CCEEEEEEEECCCCccccceeEEEEe
Confidence 688999988 7 67766431000 0111112222335665544422111 112358899988876 43321110
Q ss_pred --CCCCCC-----CccEEEEECCeEEE-EeccCCCCCcceEEEEECCCCcEEEec
Q 010551 239 --DLVTGR-----AGHAGITIDENWYI-VGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 239 --~~p~~r-----~~~~~~~~~~~l~v-~GG~~~~~~~~~~~~~d~~~~~W~~v~ 285 (507)
...... .......-+++.++ +... ......+|++|..+..-..|.
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~--~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN--EEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEEC--TTSCEEEEEEETTCSSCEESC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEc--CCCceEEEEEECCCCceEecc
Confidence 000000 11111222444333 4321 233578999998877655554
No 375
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=71.84 E-value=27 Score=27.90 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=18.6
Q ss_pred HHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHH
Q 010551 400 VLELSLTEVRTENSRFREKIDEVNSTHSELSKELSS 435 (507)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~ 435 (507)
..+........+-..|..+++.......++..+|..
T Consensus 49 rYK~~F~~dy~EYk~Lhaev~~v~~~F~~Ld~~L~~ 84 (140)
T 1xaw_A 49 LYKRNFDTGLQEYKSLQSVLDEINKELSRLDKELDD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333444445555666666665555555555444
No 376
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=71.23 E-value=35 Score=30.86 Aligned_cols=9 Identities=11% Similarity=0.412 Sum_probs=3.4
Q ss_pred hHHHHHHhh
Q 010551 415 FREKIDEVN 423 (507)
Q Consensus 415 l~~~l~~~~ 423 (507)
|++++++++
T Consensus 29 l~~~i~~L~ 37 (302)
T 3ibp_A 29 LQSRIQSLM 37 (302)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 377
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=71.08 E-value=68 Score=29.93 Aligned_cols=287 Identities=8% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEcc-CCceeeeccccccCCCccccCC
Q 010551 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLR-SLAWSNLRLETELDADKTEDSG 83 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~ 83 (507)
+|.+|+.+.+.+.+............+.+..-+++.++.+... .+.+||+. ++....+......
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~------~v~~~~~~~~g~~~~~~~~~~~--------- 82 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK------KWSSFAVKSPTEIVHEASHPIG--------- 82 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT------EEEEEEEEETTEEEEEEEEECC---------
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc------eEEEEEECCCCCEEEeeEeecC---------
Q ss_pred CcCCCCCccceeEEEECCE-EEEEecc-------C-----CCCCCcceEEEEECC-CCcEEEeecCCCCCCCCcCcEEEE
Q 010551 84 LLEVLPPMSDHCMVKWGTK-LLILGGH-------Y-----KKSSDSMIVRFIDLE-TNLCGVMETSGKVPVTRGGHSVTL 149 (507)
Q Consensus 84 ~~~~p~~r~~~~~~~~~~~-lyv~GG~-------~-----~~~~~~~~~~~yd~~-t~~W~~~~~~g~~p~~r~~~~~~~ 149 (507)
....+.++.-+++ ||++.+. . .... +.+|++. ++........-.......-+.++.
T Consensus 83 ------g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~----v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 152 (365)
T 1jof_A 83 ------GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY----GNVFSVSETGKLEKNVQNYEYQENTGIHGMVF 152 (365)
T ss_dssp ------SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE----EEEEEECTTCCEEEEEEEEECCTTCCEEEEEE
T ss_pred ------CCCccEEECCCCCEEEEEEecCCcceeccceeecCCce----EEEEccCCCCcCcceEeeEEeCCCCcceEEEE
Q ss_pred E-CCEEEEEcCCCCCCCccCcEEEEECC-CCcEEEeccCCCCC-CCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEEC
Q 010551 150 V-GSRLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPP-APRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL 226 (507)
Q Consensus 150 ~-~~~iy~~GG~~~~~~~~n~~~~~d~~-t~~W~~~~~~~~~p-~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~ 226 (507)
- +++.++..... .+.+++||+. +++...+....... .....+.+..-+++.+|+.+..++.. .++.+|.
T Consensus 153 spdG~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v---~v~~~~~ 224 (365)
T 1jof_A 153 DPTETYLYSADLT-----ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI---CEYVIDP 224 (365)
T ss_dssp CTTSSEEEEEETT-----TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE---EEEEECT
T ss_pred CCCCCEEEEEcCC-----CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE---EEEEEeC
Q ss_pred CCCcEEe-cccCCCCCCCCCc----------cEEEE-E---CCeEEEEeccCCCCCcceEEEEECC-CCcEEEecc-CCC
Q 010551 227 QTNEWSQ-PEIKGDLVTGRAG----------HAGIT-I---DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILTS-VKG 289 (507)
Q Consensus 227 ~~~~W~~-~~~~~~~p~~r~~----------~~~~~-~---~~~l~v~GG~~~~~~~~~~~~~d~~-~~~W~~v~~-~~~ 289 (507)
.++.... .......|....+ ...+. + +..+|+.....+......+.+|++. +.....+.. .+.
T Consensus 225 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~ 304 (365)
T 1jof_A 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT 304 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC
T ss_pred CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec
Q ss_pred CCCCCCCCCceEEEEEc---CceEEEEEccCCCCcCceEEEEECCCC
Q 010551 290 RNPLASEGLSVCSAIIE---GEHHLVAFGGYNGKYNNEVFVMRLKPR 333 (507)
Q Consensus 290 ~~~~~~~~~~~~~~~~~---~~~~l~v~GG~~~~~~~~~~~~~~~~~ 333 (507)
.. ......++.+ ++.+|++.+..+ +.+.+|+....
T Consensus 305 ~~-----~~~~~~a~sp~~~dg~~l~v~~~~~----~~v~v~~~~~~ 342 (365)
T 1jof_A 305 PT-----SGGHSNAVSPCPWSDEWMAITDDQE----GWLEIYRWKDE 342 (365)
T ss_dssp SS-----CCTTCCCEEECTTCTTEEEEECSSS----CEEEEEEEETT
T ss_pred CC-----CCcccceecCCCcCCCEEEEEEcCC----CeEEEEEEchh
No 378
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=70.86 E-value=33 Score=27.83 Aligned_cols=22 Identities=18% Similarity=0.241 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~~ 487 (507)
..+++.++.++++..+..++++
T Consensus 81 q~~~ek~~r~e~k~~l~~ql~q 102 (150)
T 4dci_A 81 QVAGKRSELEEQKRNLLQQQAQ 102 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443
No 379
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=70.78 E-value=7.2 Score=22.24 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010551 466 TIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
+||.+.+++..+...++.|..+++..
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~L 29 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46666666666666666666655443
No 380
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=70.64 E-value=28 Score=25.28 Aligned_cols=6 Identities=33% Similarity=0.722 Sum_probs=2.1
Q ss_pred HHHHHH
Q 010551 467 IENEVQ 472 (507)
Q Consensus 467 le~e~~ 472 (507)
||.+++
T Consensus 68 LE~kve 73 (86)
T 3swk_A 68 LERKVE 73 (86)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 381
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=70.61 E-value=65 Score=29.56 Aligned_cols=220 Identities=7% Similarity=-0.037 Sum_probs=114.4
Q ss_pred CCCeEeeCCCCceEEeecCCCCCCccccceEEEE--CCEEEEEcCCCCCccCCceEEEEccC----CceeeeccccccCC
Q 010551 3 SGSWHLELPYDLWVTLPVSGARPSPRYKHAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRS----LAWSNLRLETELDA 76 (507)
Q Consensus 3 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~----~~W~~~~~~~~~~~ 76 (507)
..+..+|+.......+.. .....+++++- ++.||+.... ...++.+|+.. ..-..+....
T Consensus 10 ~~I~~i~~~~~~~~~~~~-----~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~---- 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-----NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRD---- 75 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-----SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSS----
T ss_pred CeEEEEECCCcceEehhc-----CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCC----
Confidence 356677888877766542 12233455544 5789988642 34688999876 2222211110
Q ss_pred CccccCCCcCCCCCccceeEEE--ECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE--ECC
Q 010551 77 DKTEDSGLLEVLPPMSDHCMVK--WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL--VGS 152 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~ 152 (507)
... -.++++ .+++||+.-.. ...+.++++....-..+... .+..| ..+++ .++
T Consensus 76 ------------~~~-p~glavd~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~-~~~~P---~~iavdp~~g 132 (316)
T 1ijq_A 76 ------------IQA-PDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRE-NGSKP---RAIVVDPVHG 132 (316)
T ss_dssp ------------CSC-CCEEEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEEC-TTCCE---EEEEEETTTT
T ss_pred ------------CCC-cCEEEEeecCCeEEEEECC------CCEEEEEeCCCCceEEEEEC-CCCCc---ceEEeCCCCC
Confidence 011 133443 47899987432 34689999886554443321 11111 12233 257
Q ss_pred EEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcE
Q 010551 153 RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 231 (507)
Q Consensus 153 ~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 231 (507)
.||+..... .+.+++++++...-..+... .. ..-.++++- .++.||+.-.. .+.|+++|+....-
T Consensus 133 ~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~-~~---~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~ 198 (316)
T 1ijq_A 133 FMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNR 198 (316)
T ss_dssp EEEEEECSS-----SCEEEEEETTSCCEEEEECS-SC---SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSC
T ss_pred EEEEEccCC-----CCeEEEEcCCCCCeEEEEEC-CC---CCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCce
Confidence 888865211 24699999865443333211 11 111233333 36778886432 35799999875433
Q ss_pred EecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 232 SQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 232 ~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
..+.... ......+++++.++.+|+.-. ....+.++|+.+..
T Consensus 199 ~~~~~~~--~~~~~P~giav~~~~ly~~d~-----~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 199 KTILEDE--KRLAHPFSLAVFEDKVFWTDI-----INEAIFSANRLTGS 240 (316)
T ss_dssp EEEEECT--TTTSSEEEEEEETTEEEEEET-----TTTEEEEEETTTCC
T ss_pred EEEeecC--CccCCcEEEEEECCEEEEEEC-----CCCeEEEEeCCCCc
Confidence 3221111 111233466777888998742 22467888875543
No 382
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=70.41 E-value=34 Score=32.89 Aligned_cols=9 Identities=33% Similarity=0.468 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 010551 451 EAQIAELQK 459 (507)
Q Consensus 451 e~~~~e~~~ 459 (507)
+.++++++.
T Consensus 104 ~~~i~~l~~ 112 (411)
T 3ghg_C 104 DSSIRYLQE 112 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334444443
No 383
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=70.29 E-value=63 Score=29.25 Aligned_cols=48 Identities=10% Similarity=0.152 Sum_probs=25.1
Q ss_pred CCCCeEeeCC-CCceEEeecCCCCCCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEcc
Q 010551 2 DSGSWHLELP-YDLWVTLPVSGARPSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLR 61 (507)
Q Consensus 2 ~~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~ 61 (507)
+.++++||+. ...|..... .+ ...+.+.. ++.||+... ...++.||+.
T Consensus 116 ~~~l~~~d~~g~~~~~~~~~---~~---~~~~~~~~~~g~l~vgt~------~~~l~~~d~~ 165 (330)
T 3hxj_A 116 DGHLYAINTDGTEKWRFKTK---KA---IYATPIVSEDGTIYVGSN------DNYLYAINPD 165 (330)
T ss_dssp TSEEEEECTTSCEEEEEECS---SC---CCSCCEECTTSCEEEECT------TSEEEEECTT
T ss_pred CCEEEEEcCCCCEEEEEcCC---Cc---eeeeeEEcCCCEEEEEcC------CCEEEEECCC
Confidence 3457888887 335654431 11 11222333 566666331 1458889887
No 384
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=69.95 E-value=65 Score=29.31 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=29.0
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 118 IVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 118 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
.+.+||+.+..-.... .+ ......++.+ ++.+++.||.++ .+.++|+.+.+
T Consensus 177 ~i~~wd~~~~~~~~~~-~~----h~~~v~~~~~sp~g~~l~s~~~dg------~i~iwd~~~~~ 229 (319)
T 3frx_A 177 MVKAWNLNQFQIEADF-IG----HNSNINTLTASPDGTLIASAGKDG------EIMLWNLAAKK 229 (319)
T ss_dssp CEEEEETTTTEEEEEE-CC----CCSCEEEEEECTTSSEEEEEETTC------EEEEEETTTTE
T ss_pred EEEEEECCcchhheee-cC----CCCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCc
Confidence 3888898876543321 11 1111222333 456777777653 58889988765
No 385
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=69.70 E-value=59 Score=28.68 Aligned_cols=156 Identities=11% Similarity=0.029 Sum_probs=82.9
Q ss_pred ceEEEE--CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEE
Q 010551 31 HAAAVF--DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLIL 106 (507)
Q Consensus 31 ~~~~~~--~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~ 106 (507)
+.+++- ++.||+.-.. .+.+.++|+....-..+.... ..+. ..++.. +++||+.
T Consensus 82 ~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~----------------~~~P-~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTG----------------LVNP-RGIVTDPVRGNLYWT 139 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS----------------CSSE-EEEEEETTTTEEEEE
T ss_pred cEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECC----------------CCCc-cEEEEeeCCCEEEEE
Confidence 445543 5789987542 346889998754332222111 0111 233333 6889987
Q ss_pred eccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEec
Q 010551 107 GGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 184 (507)
Q Consensus 107 GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~ 184 (507)
.... ....++++++....-..+... +.. .-..++.- ++.||+.-.. .+.+++||+....-..+.
T Consensus 140 ~~~~----~~~~I~~~~~dg~~~~~~~~~---~~~-~P~gia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 140 DWNR----DNPKIETSHMDGTNRRILAQD---NLG-LPNGLTFDAFSSQLCWVDAG------THRAECLNPAQPGRRKVL 205 (267)
T ss_dssp ECCS----SSCEEEEEETTSCCCEEEECT---TCS-CEEEEEEETTTTEEEEEETT------TTEEEEEETTEEEEEEEE
T ss_pred ECCC----CCcEEEEEecCCCCcEEEEEC---CCC-CCcEEEEcCCCCEEEEEECC------CCEEEEEecCCCceEEEe
Confidence 5321 134688998875543333211 111 11222332 4688886432 357999999764333332
Q ss_pred cCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe
Q 010551 185 VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 233 (507)
Q Consensus 185 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 233 (507)
.. ...| ++++ ++++.+|+.... .+.++++|+.+++...
T Consensus 206 ~~--~~~P---~gi~-~d~~~lyva~~~-----~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 206 EG--LQYP---FAVT-SYGKNLYYTDWK-----TNSVIAMDLAISKEMD 243 (267)
T ss_dssp EC--CCSE---EEEE-EETTEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred cC--CCCc---eEEE-EeCCEEEEEECC-----CCeEEEEeCCCCCceE
Confidence 21 1112 2344 457778885432 2579999998877554
No 386
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=69.39 E-value=7.2 Score=22.38 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010551 465 QTIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 465 ~~le~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
.+||.+.+++..++..++.|..+.+..
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~L 30 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 356666677777777777766555443
No 387
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=69.36 E-value=36 Score=26.08 Aligned_cols=21 Identities=14% Similarity=0.414 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHH
Q 010551 467 IENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 467 le~e~~~~~~~~~~~~~~~~~ 487 (507)
+++++..+.++++.++.++++
T Consensus 82 ie~~i~~le~~~~~l~~~l~~ 102 (117)
T 2zqm_A 82 LEVRLNALERQEKKLNEKLKE 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444443
No 388
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=68.84 E-value=36 Score=25.90 Aligned_cols=15 Identities=33% Similarity=0.434 Sum_probs=5.7
Q ss_pred HHHHHHHhHHHHHHH
Q 010551 470 EVQILRQQKSAFEQE 484 (507)
Q Consensus 470 e~~~~~~~~~~~~~~ 484 (507)
++..+..++..++++
T Consensus 79 ~i~~l~~~i~~l~~~ 93 (112)
T 1l8d_A 79 TLAKLIDRKSELERE 93 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 389
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=68.82 E-value=8.2 Score=21.94 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010551 465 QTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 465 ~~le~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
.+||.+.+++.+++..++.|..+.+.
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34566666666666666666655443
No 390
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=68.77 E-value=55 Score=31.55 Aligned_cols=13 Identities=23% Similarity=0.225 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHhh
Q 010551 391 IDAIKEDKRVLEL 403 (507)
Q Consensus 391 ~~~l~~~~~~~~~ 403 (507)
++.|+....++..
T Consensus 67 I~kLkn~L~~~s~ 79 (491)
T 1m1j_A 67 IDNIRQQLADSQN 79 (491)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5555555444433
No 391
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=68.51 E-value=77 Score=29.60 Aligned_cols=187 Identities=9% Similarity=-0.008 Sum_probs=99.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEE--ECCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK--WGTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~ 114 (507)
++.||+.-- ....++.+++....-..+..... ..-.++++ .++.||+.-..
T Consensus 84 ~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~-----------------~~p~glavd~~~g~ly~~d~~----- 136 (349)
T 3v64_C 84 RELVFWSDV-----TLDRILRANLNGSNVEEVVSTGL-----------------ESPGGLAVDWVHDKLYWTDSG----- 136 (349)
T ss_dssp TTEEEEEET-----TTTEEEEEETTSCSCEEEECSSC-----------------SCCCEEEEETTTTEEEEEETT-----
T ss_pred ccEEEEEec-----cCCceEEEecCCCCceEEEeCCC-----------------CCccEEEEecCCCeEEEEcCC-----
Confidence 577887643 12468888887765444332210 01123333 37889987432
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 192 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~ 192 (507)
...++++++....-..+... .+..| ..+++- ++.||+.--.. .+.+++++++...-..+... .
T Consensus 137 -~~~I~~~~~dG~~~~~l~~~-~l~~P---~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~-----~ 201 (349)
T 3v64_C 137 -TSRIEVANLDGAHRKVLLWQ-SLEKP---RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADT-----H 201 (349)
T ss_dssp -TTEEEEEETTSCSCEEEECT-TCSCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCCS-----S
T ss_pred -CCeEEEEcCCCCceEEEEeC-CCCCc---ceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEEC-----C
Confidence 34699999876654443321 12111 122332 56888764321 35799999876543333211 1
Q ss_pred CCC-ceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEeccCCCCCcce
Q 010551 193 RYD-HSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQE 270 (507)
Q Consensus 193 r~~-~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~ 270 (507)
... .++++- .++.||+.-.. .+.|+++|+....-..+.. ... ...+++++.++.+|+.--. ...
T Consensus 202 ~~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~-~~~---~~P~giav~~~~ly~td~~-----~~~ 267 (349)
T 3v64_C 202 LFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVIS-QGL---PHPFAITVFEDSLYWTDWH-----TKS 267 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEC-SSC---SSEEEEEEETTEEEEEETT-----TTE
T ss_pred CCCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEe-CCC---CCceEEEEECCEEEEecCC-----CCe
Confidence 111 233333 47788886432 3579999987543222211 111 2334666778889988432 235
Q ss_pred EEEEECCCC
Q 010551 271 TIVLNMTKL 279 (507)
Q Consensus 271 ~~~~d~~~~ 279 (507)
+..+|..+.
T Consensus 268 V~~~~~~~G 276 (349)
T 3v64_C 268 INSANKFTG 276 (349)
T ss_dssp EEEEETTTC
T ss_pred EEEEEccCC
Confidence 777774443
No 392
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=68.27 E-value=6.3 Score=34.93 Aligned_cols=20 Identities=30% Similarity=0.388 Sum_probs=8.9
Q ss_pred HHHHHHHHHhHHHHHHHHHH
Q 010551 468 ENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 468 e~e~~~~~~~~~~~~~~~~~ 487 (507)
..++.++++++.++.+|++.
T Consensus 74 ~~~Lk~ar~El~~LkeEler 93 (251)
T 3m9b_A 74 METLKEARQQLLALREEVDR 93 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 393
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.25 E-value=53 Score=33.09 Aligned_cols=111 Identities=13% Similarity=-0.008 Sum_probs=60.0
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCc
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 179 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~ 179 (507)
++.+++..+... .+.+||+.++.-..+.. .+. ...+..-+++.+++++.+... ...++++|+.++.
T Consensus 121 g~~~~~~s~~~~------~~~l~d~~~g~~~~l~~---~~~---~~~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 121 GEAVVFTGATED------RVALYALDGGGLRELAR---LPG---FGFVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGG 186 (582)
T ss_dssp SSCEEEEEECSS------CEEEEEEETTEEEEEEE---ESS---CEEEEEEETTEEEEEEEEETT--EEEEEEEETTTCC
T ss_pred CCeEEEEecCCC------CceEEEccCCcEEEeec---CCC---ceEEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCC
Confidence 455666554332 24477998988776652 122 222233455555555543221 2459999999999
Q ss_pred EEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEE
Q 010551 180 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 232 (507)
Q Consensus 180 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 232 (507)
+..+... + ......+...+++.++.+..++ ...++++|+.++...
T Consensus 187 ~~~l~~~---~--~~~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 187 LRVFDSG---E--GSFSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEECCS---S--CEEEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred ceEeecC---C--CccccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 8877431 1 1112223333443444333221 246899999888776
No 394
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=68.17 E-value=13 Score=35.51 Aligned_cols=20 Identities=5% Similarity=0.220 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~ 485 (507)
.++.++++++.+++..+.++
T Consensus 133 ~~~~~l~~~~~~l~~a~~~l 152 (369)
T 4dk0_A 133 VVQENIKQAEIEVNTAETNL 152 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34444444444444444443
No 395
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=68.15 E-value=79 Score=29.54 Aligned_cols=145 Identities=14% Similarity=0.028 Sum_probs=72.3
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEE-EEE--CCEEEEEcCCCCCCCccCcEEEEECC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSV-TLV--GSRLIIFGGEDRSRKLLNDVHFLDLE 176 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~-~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~ 176 (507)
++++||.+.... ..++++++....-.......+.+..+.+..- +.. ++.|++..+ . ..++.||+.
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~------g~L~~fD~~ 214 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P------RALTAFDVS 214 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S------SSEEEEECS
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C------CeEEEEcCC
Confidence 588999765431 4599999886532221111122344555544 344 447777766 3 359999988
Q ss_pred CCcEEEeccC--CCCCCCCCCce--EEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCC---CCccEE
Q 010551 177 TMTWDAVEVT--QTPPAPRYDHS--AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTG---RAGHAG 249 (507)
Q Consensus 177 t~~W~~~~~~--~~~p~~r~~~~--~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~---r~~~~~ 249 (507)
+.....++.. |........-. ....+++.++|.-+. +..+.+-...+ |......+..|.+ ....+.
T Consensus 215 ~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~ 287 (334)
T 2p9w_A 215 KPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSWDN-WKSANIKKTKRSELQNSGFTAV 287 (334)
T ss_dssp SSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECSST-TSEEEEEEEECGGGGSSCEEEE
T ss_pred CCcceeecccccCCcccccCcccccccccCCEEEEEEcCC------CCEEEEECCCC-cceeEEeeeecCccccCceeEE
Confidence 5432122221 21100011111 112344433443332 34556655545 9886555544442 333333
Q ss_pred EE----ECCeEEEEeccC
Q 010551 250 IT----IDENWYIVGGGD 263 (507)
Q Consensus 250 ~~----~~~~l~v~GG~~ 263 (507)
++ .++++|++.+..
T Consensus 288 t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 288 ADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEEEETTEEEEEEEECCG
T ss_pred EEeccccCCeEEEEeeec
Confidence 34 467999998643
No 396
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=68.01 E-value=36 Score=27.55 Aligned_cols=14 Identities=29% Similarity=0.375 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHhHH
Q 010551 466 TIENEVQILRQQKS 479 (507)
Q Consensus 466 ~le~e~~~~~~~~~ 479 (507)
++.....++..+++
T Consensus 88 ~r~e~k~~l~~ql~ 101 (150)
T 4dci_A 88 ELEEQKRNLLQQQA 101 (150)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444444
No 397
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=67.63 E-value=7.7 Score=36.57 Aligned_cols=16 Identities=6% Similarity=0.169 Sum_probs=6.6
Q ss_pred HHHHHHhHHHHHHHHH
Q 010551 471 VQILRQQKSAFEQEME 486 (507)
Q Consensus 471 ~~~~~~~~~~~~~~~~ 486 (507)
++.++.+++..+.+++
T Consensus 130 l~~~~a~l~~a~a~l~ 145 (341)
T 3fpp_A 130 IGTIDAQIKRNQASLD 145 (341)
T ss_dssp HHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333444444444443
No 398
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=67.08 E-value=26 Score=29.57 Aligned_cols=11 Identities=27% Similarity=0.718 Sum_probs=4.7
Q ss_pred hhhhhHHHHHH
Q 010551 411 ENSRFREKIDE 421 (507)
Q Consensus 411 ~~~~l~~~l~~ 421 (507)
++.+|.+.|+.
T Consensus 116 EN~~Lh~~ie~ 126 (209)
T 2wvr_A 116 ENEKLHKEIEQ 126 (209)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444433
No 399
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=67.05 E-value=63 Score=28.05 Aligned_cols=151 Identities=11% Similarity=0.162 Sum_probs=77.9
Q ss_pred eEEEECCEEEEEeccCCCCCCcceEEEEECCCCc-EEEeecC--C-CCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccC
Q 010551 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETS--G-KVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLN 168 (507)
Q Consensus 95 ~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~--g-~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n 168 (507)
+++.+.+++|+|=|.. +|+++..... ....... . .+|. ... ++... ++++|+|-|.
T Consensus 35 Ai~~~~g~~~fFkg~~--------~Wr~~~~~~~~~~P~~I~~~wp~lp~-~ID-AA~~~~~~~k~yfFkG~-------- 96 (218)
T 1gen_A 35 GIAQIRGEIFFFKDRF--------IWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAGN-------- 96 (218)
T ss_dssp EEEEETTEEEEEETTE--------EEEESSTTSCCEEEEEGGGTCTTSCS-CCS-EEEEETTTTEEEEEETT--------
T ss_pred EEEeCCCcEEEEECCE--------EEEEeCCCCccCCCEEHHHhcCCCCC-Ccc-EEEEECCCCEEEEEeCC--------
Confidence 4556789999997642 7777654422 2221111 1 2232 122 22222 5799999773
Q ss_pred cEEEEECCCCc--E-EEeccCCCCCCC-CCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-----cc-cC
Q 010551 169 DVHFLDLETMT--W-DAVEVTQTPPAP-RYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PE-IK 237 (507)
Q Consensus 169 ~~~~~d~~t~~--W-~~~~~~~~~p~~-r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~-~~ 237 (507)
..|+||-.+.. . ..+...| .|.. ..-.++... .++++|+|-| +..|+||..++.-.. +. .-
T Consensus 97 ~yW~y~~~~~~~gyPk~I~~~g-~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w 168 (218)
T 1gen_A 97 EYWIYSASTLERGYPKPLTSLG-LPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAW 168 (218)
T ss_dssp EEEEEETTEECTTCSEEGGGGT-CCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHS
T ss_pred EEEEEcCccccCCCCccHhhcC-CCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhcc
Confidence 47888742110 0 1111112 2221 122333332 5688999987 479999987764322 11 00
Q ss_pred CCCCCCCCccEEEEEC--CeEEEEeccCCCCCcceEEEEECCCCc
Q 010551 238 GDLVTGRAGHAGITID--ENWYIVGGGDNNNGCQETIVLNMTKLA 280 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~~ 280 (507)
..+ |..-.++.... +.+|+|=| +..|.||..+..
T Consensus 169 ~g~--p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 169 NAI--PDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp SSC--CSSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCC--CCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 112 22334555554 78998866 256788865544
No 400
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=67.00 E-value=92 Score=29.87 Aligned_cols=202 Identities=9% Similarity=-0.030 Sum_probs=102.7
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.||+.... ...+.+||+.++.-..+.... ...+ ++.. ++.||+......
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~------------------~~~~-ia~~~~g~~l~~~d~~~~--- 193 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF------------------KGGK-PAVTKDKQRVYSIGWEGT--- 193 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETC------------------CBCB-CEECTTSSEEEEEBSSTT---
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccC------------------CCCc-eeEecCCCcEEEEecCCC---
Confidence 6788888752 246899999987766654322 1122 2222 455666543221
Q ss_pred CcceEEEEECCCCcE-EEeecCCCCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCC
Q 010551 115 DSMIVRFIDLETNLC-GVMETSGKVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 191 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~ 191 (507)
..++.|++.++.- ..+..... +....-+.+++. ++.||+... .+.+++||+.+.....+...+....
T Consensus 194 --~~I~~~d~~~~~~~~~~g~~~~-~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 194 --HTVYVYMKASGWAPTRIGQLGS-TFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp --CEEEEEEGGGTTCEEEEEECCT-TSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSC
T ss_pred --ceEEEEEcCCCceeEEeeeccc-hhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCC
Confidence 1599999876542 23311101 011111233332 568888322 2469999998887655522211111
Q ss_pred CCCC-c-eEEEEc-CCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCC--------C-CCcc-EEEEE-CCeEE
Q 010551 192 PRYD-H-SAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT--------G-RAGH-AGITI-DENWY 257 (507)
Q Consensus 192 ~r~~-~-~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~--------~-r~~~-~~~~~-~~~l~ 257 (507)
.... + .++... ++.||+.... .+.|++|++... ...+...+..+. . .... .+++. ++++|
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~-----~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly 337 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQN-----LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY 337 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETT-----TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE
T ss_pred CCCCccccEEEeCCCCEEEEEeCC-----CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE
Confidence 1222 2 455554 5788886432 246899987654 222211110000 0 1112 33333 45788
Q ss_pred EEeccCCCCCcceEEEEECCCCcEEEec
Q 010551 258 IVGGGDNNNGCQETIVLNMTKLAWSILT 285 (507)
Q Consensus 258 v~GG~~~~~~~~~~~~~d~~~~~W~~v~ 285 (507)
|.-.. ....+.++|+.+.....+.
T Consensus 338 vad~~----~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 338 IVDGF----KGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EEETT----TTCEEEEEETTTTEEEEEE
T ss_pred EEeCC----CCCEEEEEECCCCEEEEEe
Confidence 87430 1235888997677655543
No 401
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=66.75 E-value=1.1e+02 Score=30.89 Aligned_cols=26 Identities=8% Similarity=0.248 Sum_probs=17.4
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceee
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSN 67 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~ 67 (507)
++..++.|+.+ ..+.++|+.++....
T Consensus 250 dg~~l~s~s~D-----~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 250 DGTKIASASAD-----KTIKIWNVATLKVEK 275 (611)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCceee
Confidence 45666666643 468899998876544
No 402
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=66.65 E-value=8.1 Score=22.15 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010551 464 SQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
+.+||.+.+++.+++..++.|..+.+.
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 345666666677767666666655443
No 403
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=65.98 E-value=24 Score=22.75 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010551 452 AQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 452 ~~~~e~~~~~~~~~~le~e~~~~~~~~~ 479 (507)
-++++++++.+++.+--.+.+..+++++
T Consensus 17 DqV~eL~qe~k~m~k~lEeEqkARk~LE 44 (56)
T 2w6b_A 17 DEVQELRQDNKKMKKSLEEEQRARKDLE 44 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444433333333333333333333
No 404
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=65.37 E-value=9.8 Score=22.09 Aligned_cols=21 Identities=10% Similarity=0.259 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~ 486 (507)
+||.+.+++..++..++.+..
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~ 25 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVA 25 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHH
Confidence 344444444444444444443
No 405
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=65.13 E-value=35 Score=24.44 Aligned_cols=25 Identities=28% Similarity=0.361 Sum_probs=12.3
Q ss_pred HHHHHhhHHHhhhhhhhhHHHHHHH
Q 010551 433 LSSVQGQLVAERSRCFKLEAQIAEL 457 (507)
Q Consensus 433 l~~~~~~~~~~~~~~~~~e~~~~e~ 457 (507)
+..++.++..-..++.++|..+.+.
T Consensus 34 l~~l~~e~~~R~~~i~el~akidd~ 58 (101)
T 1d7m_A 34 LASLESEGAEREKRLRELEAKLDET 58 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555555555544443
No 406
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=64.73 E-value=11 Score=24.33 Aligned_cols=22 Identities=36% Similarity=0.285 Sum_probs=8.4
Q ss_pred HHHHHhHHHHHHHHHHhhcccc
Q 010551 472 QILRQQKSAFEQEMERATSVQT 493 (507)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~ 493 (507)
+++..+-...++|.++++..++
T Consensus 28 ~~Le~~c~e~eQEieRL~~LLk 49 (58)
T 3a2a_A 28 QHLEFSCSEKEQEIERLNKLLR 49 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444444433333
No 407
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=64.72 E-value=17 Score=25.21 Aligned_cols=20 Identities=30% Similarity=0.361 Sum_probs=9.2
Q ss_pred HHHHHHHHHHhHHHHHHHHH
Q 010551 467 IENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 467 le~e~~~~~~~~~~~~~~~~ 486 (507)
+..+.+.|..++..+..+++
T Consensus 48 l~~en~~Lr~~i~~L~~El~ 67 (70)
T 1gd2_E 48 TTLENDQLRQKVRQLEEELR 67 (70)
T ss_dssp HHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 408
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=64.17 E-value=31 Score=23.57 Aligned_cols=40 Identities=25% Similarity=0.167 Sum_probs=16.7
Q ss_pred hhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhh
Q 010551 411 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKL 450 (507)
Q Consensus 411 ~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~ 450 (507)
++.+|+..+.-..+..+.+..|+-...-++--+++++.++
T Consensus 33 eI~~L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl~~l 72 (75)
T 3a7o_A 33 EIRRLKEVIALKNKNTERLNDELISGTIENNVLQQKLSDL 72 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHHHHH
Confidence 4444444444444444444444444444444444444443
No 409
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=64.15 E-value=13 Score=35.04 Aligned_cols=8 Identities=0% Similarity=-0.056 Sum_probs=2.8
Q ss_pred HHHHHHhH
Q 010551 471 VQILRQQK 478 (507)
Q Consensus 471 ~~~~~~~~ 478 (507)
+++++.++
T Consensus 137 l~~a~a~l 144 (341)
T 3fpp_A 137 IKRNQASL 144 (341)
T ss_dssp HHHTHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 410
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=64.08 E-value=35 Score=23.99 Aligned_cols=62 Identities=13% Similarity=0.176 Sum_probs=0.0
Q ss_pred hHHHhHHHHHhhHHHh-----hhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 428 ELSKELSSVQGQLVAE-----RSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 428 e~~~el~~~~~~~~~~-----~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
++.+-|.+++.+.+.. ++.+...+.++++++.....-. ....|+.+++.+++.++-+++.+.
T Consensus 6 DL~~il~eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 6 DCTAAMRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 411
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=63.64 E-value=8.2 Score=22.40 Aligned_cols=19 Identities=26% Similarity=0.403 Sum_probs=8.0
Q ss_pred HHHHHHHHHHhHHHHHHHH
Q 010551 467 IENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 467 le~e~~~~~~~~~~~~~~~ 485 (507)
||.+.+++..++..++.|.
T Consensus 6 LE~kVEeLl~~~~~Le~EV 24 (36)
T 1kd8_A 6 LEAEVEEIESEVWHLENEV 24 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHH
Confidence 3444444444444444443
No 412
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=63.57 E-value=11 Score=26.20 Aligned_cols=18 Identities=22% Similarity=0.078 Sum_probs=7.6
Q ss_pred HHHhhHHHhhhhhhhhHH
Q 010551 435 SVQGQLVAERSRCFKLEA 452 (507)
Q Consensus 435 ~~~~~~~~~~~~~~~~e~ 452 (507)
....+++.++..+..|..
T Consensus 47 ~l~~en~~Lr~~i~~L~~ 64 (70)
T 1gd2_E 47 STTLENDQLRQKVRQLEE 64 (70)
T ss_dssp HHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444433
No 413
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=63.47 E-value=18 Score=23.25 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=9.3
Q ss_pred HHHHHHHHHHhHHHHHHHHH
Q 010551 467 IENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 467 le~e~~~~~~~~~~~~~~~~ 486 (507)
|...+.+..+++..+.++++
T Consensus 28 L~~~L~~AR~el~~Lkeele 47 (51)
T 3m91_A 28 LMETLKEARQQLLALREEVD 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444
No 414
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=63.13 E-value=42 Score=24.60 Aligned_cols=48 Identities=10% Similarity=0.191 Sum_probs=24.0
Q ss_pred hHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010551 428 ELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 428 e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~ 481 (507)
+.+..++.--.+++..+..+.+||.....++ +.-|+|+..|..+++..
T Consensus 40 eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmK------q~YEeEI~rLr~eLe~r 87 (92)
T 3vp9_A 40 DYDFKMNQQLAEMQQIRNTVYERELTHRKMK------DAYEEEIKHLKLGLEQR 87 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHc
Confidence 4444444444455555555555554443322 34556666666666543
No 415
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=63.04 E-value=1.1e+02 Score=29.18 Aligned_cols=243 Identities=15% Similarity=0.116 Sum_probs=0.0
Q ss_pred ccceEEEE-CCEEEEEc-------CCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE-
Q 010551 29 YKHAAAVF-DQKLYIVG-------GSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW- 99 (507)
Q Consensus 29 ~~~~~~~~-~~~iyi~G-------G~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~- 99 (507)
..|++++. ++.||.|| |.........-.......+.-.++.... .-..|+++..
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~-----------------~G~~h~~al~~ 124 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVN-----------------SGGKHCLALSS 124 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEEC-----------------TTCSEEEEEET
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEEC-----------------cCCCeEEEEcC
Q ss_pred CCEEEEEe-------ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECC-EEEEEc-------CCCCCC
Q 010551 100 GTKLLILG-------GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFG-------GEDRSR 164 (507)
Q Consensus 100 ~~~lyv~G-------G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~G-------G~~~~~ 164 (507)
++.||.|| |.........-..+-.+.......+. .-..|+++...+ .+|.+| |.....
T Consensus 125 ~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va-------~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~ 197 (389)
T 3kci_A 125 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA-------AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE 197 (389)
T ss_dssp TSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE-------ECSSEEEEEETTSCEEEEECCGGGTTCSSSCC
T ss_pred CCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEE-------eCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCc
Q ss_pred CccCcEEEEECCCCcEEEeccCCCCCCCC-CCceEEEEcCCEEEEEc-------CCCCCCCCCcEEEEECCCC-cEEecc
Q 010551 165 KLLNDVHFLDLETMTWDAVEVTQTPPAPR-YDHSAALHANRYLIVFG-------GCSHSIFFNDLHVLDLQTN-EWSQPE 235 (507)
Q Consensus 165 ~~~n~~~~~d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~l~v~G-------G~~~~~~~~~i~~~d~~~~-~W~~~~ 235 (507)
....-..+-.+...+-..+.. .. ..|++++..++.+|.+| |.+.......-...+.-.+ ....+
T Consensus 198 ~~~~p~~v~~~~~~~v~~ia~------G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v- 270 (389)
T 3kci_A 198 DQLKPKLVEALQGHRVVDIAC------GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV- 270 (389)
T ss_dssp CEEEEEECGGGTTSCEEEEEE------CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEE-
T ss_pred ccccceEecccCCCeEEEEEE------cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEE-
Q ss_pred cCCCCCCCCCccEEEEE-CCeEEEEe----ccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceE
Q 010551 236 IKGDLVTGRAGHAGITI-DENWYIVG----GGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH 310 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~-~~~l~v~G----G~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (507)
..-..|++++. ++.+|.+| |.-+.....+...- ..+..+..........-..+.+++..+..
T Consensus 271 ------~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P-------~~v~~l~~~~v~~ia~G~~h~~al~~~G~ 337 (389)
T 3kci_A 271 ------ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP-------RQVQGLQGKKVIAIATGSLHCVCCTEDGE 337 (389)
T ss_dssp ------EEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEE-------EECGGGTTCCEEEEEECSSEEEEEETTCC
T ss_pred ------eCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCC-------eEeccCCCCCEEEEEeccCeEEEECCCCC
Q ss_pred EEEEc
Q 010551 311 LVAFG 315 (507)
Q Consensus 311 l~v~G 315 (507)
+|.+|
T Consensus 338 v~~wG 342 (389)
T 3kci_A 338 VYTWG 342 (389)
T ss_dssp EEEEE
T ss_pred EEEee
No 416
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=62.97 E-value=26 Score=34.96 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccch----hHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 390 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHS----ELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~----e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
++..+.++++.+.....+.+.+.+.+.++|.++...-+ +...+.+++..+...+++++..++.++.++++++...
T Consensus 71 ~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~ 149 (501)
T 1wle_A 71 GIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLR 149 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 417
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=62.71 E-value=7.9 Score=34.20 Aligned_cols=62 Identities=11% Similarity=0.213 Sum_probs=37.0
Q ss_pred CCEEEEEcCCCCCCCccCcEEEEECCCCcEE-----EeccCCCCCC------CCCCceEEEE-cCCEEEEEcCCCCCCCC
Q 010551 151 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-----AVEVTQTPPA------PRYDHSAALH-ANRYLIVFGGCSHSIFF 218 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~-----~~~~~~~~p~------~r~~~~~~~~-~~~~l~v~GG~~~~~~~ 218 (507)
++++|+|-|. ..|+||..+++-. .+. . ..|. +..-.++... .++++|+|-|
T Consensus 129 ~~k~yfFkG~--------~yw~~d~~~~~~~~gyPk~i~-~-g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg------- 191 (227)
T 3lp9_A 129 GKEVYLFKGD--------QYARIDYGSNSMVNKEIKSIS-S-GYPCFRNTIFESGADAAFASHKTNEVYFFKD------- 191 (227)
T ss_dssp TTEEEEEETT--------EEEEEETTTTEESSSSCEEHH-H-HCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------
T ss_pred CCEEEEEECC--------EEEEEeCCCccccCCCCeEHH-H-CCCCccccccCCCccEEEEcCCCceEEEEEC-------
Confidence 5799999883 4889997654321 111 0 1221 1222333332 5678999988
Q ss_pred CcEEEEECCCC
Q 010551 219 NDLHVLDLQTN 229 (507)
Q Consensus 219 ~~i~~~d~~~~ 229 (507)
+..|+||..+.
T Consensus 192 ~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 DHYARVKVTPX 202 (227)
T ss_dssp TEEEEEECCSS
T ss_pred CEEEEEECCcc
Confidence 47899998765
No 418
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=62.65 E-value=1.2e+02 Score=29.69 Aligned_cols=154 Identities=8% Similarity=-0.003 Sum_probs=81.8
Q ss_pred eEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCC---CCCCCCcCcEEEEE--CCEEEEEcCCCCCCCccCc
Q 010551 95 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSG---KVPVTRGGHSVTLV--GSRLIIFGGEDRSRKLLND 169 (507)
Q Consensus 95 ~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g---~~p~~r~~~~~~~~--~~~iy~~GG~~~~~~~~n~ 169 (507)
+++.+.+.+|+|-|.. +|+++.....+....... .+|.. . -++... ++++|+|=|. .
T Consensus 267 Ai~~~~ge~y~Fkg~~--------~wr~~~~~~~~~p~~I~~~Wp~LP~~-i-DAa~~~~~~g~~~fFKg~--------~ 328 (450)
T 1su3_A 267 AITTIRGEVMFFKDRF--------YMRTNPFYPEVELNFISVFWPQLPNG-L-EAAYEFADRDEVRFFKGN--------K 328 (450)
T ss_dssp EEEEETTEEEEEETTE--------EEECCTTSSSCEEEEGGGTCTTSCSS-C-CEEEEEGGGTEEEEEETT--------E
T ss_pred eEEecCCeEEEEeCCE--------EEEEcCCCCcccceehhHhccCCCCC-e-eEEEEEcCCCeEEEEeCC--------E
Confidence 4556799999997742 677665544443322221 22322 1 122332 5899999774 3
Q ss_pred EEEEECCCC--cE-EEec-cCCCCCC-CCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEe-----ccc-C
Q 010551 170 VHFLDLETM--TW-DAVE-VTQTPPA-PRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEI-K 237 (507)
Q Consensus 170 ~~~~d~~t~--~W-~~~~-~~~~~p~-~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~-~ 237 (507)
+|+|+..+. .+ ..+. ..| .|. +..--++... .++++|+|-| +..|+||..+..-.. +.. -
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~f 400 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFG-FPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDF 400 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHC-CCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHS
T ss_pred EEEecCCcccCCCceeeehhhc-CCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcC
Confidence 677764221 00 1111 111 222 1122233333 4678999987 479999987544321 110 0
Q ss_pred CCCCCCCCccEEEEECCeEEEEeccCCCCCcceEEEEECCCCcEEE
Q 010551 238 GDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSI 283 (507)
Q Consensus 238 ~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 283 (507)
+..| ..-.+++..++++|+|-| +..|.||..+..-..
T Consensus 401 pgip--~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 401 PGIG--HKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp TTSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCC--CCccEEEEcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 1122 223345556889999966 357899988776544
No 419
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=62.62 E-value=11 Score=21.64 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 464 SQTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
+.+|+.+.+++...+..++.+..+++
T Consensus 3 MnQLEdkVEeLl~~~~~Le~eV~RL~ 28 (34)
T 2hy6_A 3 VKQLADAVEELASANYHLANAVARLA 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34566666666666666666655443
No 420
>1m5i_A APC protein; coiled-coil, antitumor protein; 2.00A {Homo sapiens} SCOP: h.4.13.1
Probab=62.52 E-value=50 Score=25.25 Aligned_cols=9 Identities=0% Similarity=-0.130 Sum_probs=0.0
Q ss_pred cCCCceeee
Q 010551 494 QGSGGVWRW 502 (507)
Q Consensus 494 q~~~g~~~~ 502 (507)
....|-|+|
T Consensus 117 ~e~~~~~k~ 125 (125)
T 1m5i_A 117 AERSSQNKH 125 (125)
T ss_dssp ---------
T ss_pred hccccccCC
Confidence 345555654
No 421
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=62.48 E-value=8.8 Score=24.03 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHhHH
Q 010551 464 SQTIENEVQILRQQKS 479 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~ 479 (507)
+-.|+++++.++++++
T Consensus 8 ILRLErEIE~Lqrqke 23 (51)
T 2lw9_A 8 ILRLEKEIEDLQRMKE 23 (51)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3345555555555554
No 422
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=62.09 E-value=9.8 Score=25.91 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=22.5
Q ss_pred HHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010551 435 SVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQ 476 (507)
Q Consensus 435 ~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~ 476 (507)
+-.+++.++...+.+.+....+++++|.-+...++|++.++.
T Consensus 9 eNgekI~~L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ~ELe~~L~ 50 (64)
T 3t97_C 9 ENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLS 50 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455555555555556666666655555555554443
No 423
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=62.06 E-value=37 Score=23.84 Aligned_cols=15 Identities=13% Similarity=0.271 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhHH
Q 010551 465 QTIENEVQILRQQKS 479 (507)
Q Consensus 465 ~~le~e~~~~~~~~~ 479 (507)
-.|+.|+..+++-++
T Consensus 43 l~Le~EIatYRkLLE 57 (74)
T 2xv5_A 43 LALDMEIHAYRKLLE 57 (74)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 366666666666554
No 424
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=62.00 E-value=48 Score=25.05 Aligned_cols=12 Identities=8% Similarity=0.351 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHh
Q 010551 391 IDAIKEDKRVLE 402 (507)
Q Consensus 391 ~~~l~~~~~~~~ 402 (507)
++.|+.+....|
T Consensus 24 ieeLq~Ei~~~E 35 (113)
T 4fi5_A 24 MEELQREINAHE 35 (113)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444444433
No 425
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=61.93 E-value=43 Score=24.28 Aligned_cols=12 Identities=17% Similarity=0.515 Sum_probs=4.9
Q ss_pred HHHhHHHHHHHH
Q 010551 474 LRQQKSAFEQEM 485 (507)
Q Consensus 474 ~~~~~~~~~~~~ 485 (507)
+..+++.+.+|+
T Consensus 68 LE~kvesL~eEl 79 (86)
T 3swk_A 68 LERKVESLQEEI 79 (86)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333444444443
No 426
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=61.84 E-value=13 Score=21.13 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 465 QTIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 465 ~~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
.+||.+++++..++..++.|..+.+
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~ 27 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNT 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3456666666666666666655443
No 427
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=61.75 E-value=1.1e+02 Score=28.94 Aligned_cols=251 Identities=12% Similarity=0.019 Sum_probs=114.2
Q ss_pred CCeEeeCCCCceEEeecCCCCCCc--c-----ccc--eEEEE----CCEEEEEcCCCCCccCCceEEEEccCCceeeecc
Q 010551 4 GSWHLELPYDLWVTLPVSGARPSP--R-----YKH--AAAVF----DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRL 70 (507)
Q Consensus 4 ~~~~~d~~~~~W~~~~~~~~~p~~--r-----~~~--~~~~~----~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 70 (507)
++|+.+-.-..|+.+......+.. + ..+ ++++. .+.||+.+. ...+++.+-...+|+.+..
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcC
Confidence 467776667899998742111111 1 111 22322 467777542 2347777777779998754
Q ss_pred ccccCCCccccCCC-cCCCCCccceeEEEE---CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecC---CCCCCCC-
Q 010551 71 ETELDADKTEDSGL-LEVLPPMSDHCMVKW---GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVTR- 142 (507)
Q Consensus 71 ~~~~~~~~~~~~~~-~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---g~~p~~r- 142 (507)
.......+...... ...+....-++++.. .+.||+..+. ..+++.+-...+|+.+... ..+|.+.
T Consensus 156 ~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~ 228 (394)
T 3b7f_A 156 FNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNV 228 (394)
T ss_dssp HHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSS
T ss_pred ccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCcc
Confidence 21100000000000 000111122333332 2567775432 2377777777899987521 1123211
Q ss_pred ----cCcEEEEE-C--CEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCC--CCCceEEEE--cCCEEEEEcC
Q 010551 143 ----GGHSVTLV-G--SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP--RYDHSAALH--ANRYLIVFGG 211 (507)
Q Consensus 143 ----~~~~~~~~-~--~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~--r~~~~~~~~--~~~~l~v~GG 211 (507)
..++++.. . +.||+- . ...+++.+-...+|+.+.. .+|.. ...+.++.. ..+.||+...
T Consensus 229 ~~g~~~~~i~~~~~~~~~l~vg-~-------~~gl~~s~D~G~tW~~~~~--~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 229 EFGHDPHCVVQHPAAPDILYQQ-N-------HCGIYRMDRREGVWKRIGD--AMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp SSCBCEEEEEECSSSTTEEEEE-E-------TTEEEEEETTTTEEECGGG--GSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred ccCcceeEEEECCCCCCEEEEE-c-------CCeEEEeCCCCCcceECCC--CCCCCCccceEEEEECCCCCCEEEEEec
Confidence 12233332 1 466663 2 1348888888889998863 23321 222333332 3455777531
Q ss_pred CCCC---C--CCCcEEEEECCC--CcEEecccCCCCCCCCC-----ccEEEEE--C-CeEEEEeccCCCCCcceEEEEEC
Q 010551 212 CSHS---I--FFNDLHVLDLQT--NEWSQPEIKGDLVTGRA-----GHAGITI--D-ENWYIVGGGDNNNGCQETIVLNM 276 (507)
Q Consensus 212 ~~~~---~--~~~~i~~~d~~~--~~W~~~~~~~~~p~~r~-----~~~~~~~--~-~~l~v~GG~~~~~~~~~~~~~d~ 276 (507)
.... . .-....+|.... .+|+.+.. .+|.... .+++++. + +.+|+ |+.. ..+++-+-
T Consensus 299 ~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~--glp~~~~~~~~~~~~~~~~p~~~~~l~~-g~~~-----g~l~~S~D 370 (394)
T 3b7f_A 299 DGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR--GLPTDQAWLTVKRQAMTADAHAPVGVYF-GTTG-----GEIWASAD 370 (394)
T ss_dssp BCCSSTTCCBCCSSCCEEEESSTTSCCEEECB--TSCCSSCCCCCCTBSEEECCSSSCCEEE-ECTT-----SCEEEESS
T ss_pred cCCccceeecCCCceeEEEECCCCCCceECCC--CCCCccccceEEEEEEEECCCCCCEEEE-EeCC-----CeEEEECC
Confidence 1110 0 001122333333 58998752 2332211 1233332 2 34554 4311 23565555
Q ss_pred CCCcEEEec
Q 010551 277 TKLAWSILT 285 (507)
Q Consensus 277 ~~~~W~~v~ 285 (507)
...+|+.+.
T Consensus 371 ~G~tW~~~~ 379 (394)
T 3b7f_A 371 EGEHWQCIA 379 (394)
T ss_dssp TTSBCEEEE
T ss_pred CCCCceEcc
Confidence 567899875
No 428
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=61.64 E-value=39 Score=24.53 Aligned_cols=14 Identities=14% Similarity=0.268 Sum_probs=5.0
Q ss_pred HHHHHHhHHHHHHH
Q 010551 471 VQILRQQKSAFEQE 484 (507)
Q Consensus 471 ~~~~~~~~~~~~~~ 484 (507)
-.+|..+++.+..|
T Consensus 52 N~~Lr~~v~~L~~E 65 (87)
T 1hjb_A 52 NERLQKKVEQLSRE 65 (87)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 429
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=61.55 E-value=1e+02 Score=28.67 Aligned_cols=152 Identities=12% Similarity=0.060 Sum_probs=73.4
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEE--EEECCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSV--TLVGSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~--~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
++++++.|+. +.+.+++..++......+. ........+ ..-++..++.++.+... ...+..+|+..
T Consensus 187 dg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~---~~~~~~v~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~ 254 (365)
T 4h5i_A 187 DGKVVAYITG-------SSLEVISTVTGSCIARKTD---FDKNWSLSKINFIADDTVLIAASLKKGK--GIVLTKISIKS 254 (365)
T ss_dssp TSSEEEEECS-------SCEEEEETTTCCEEEEECC---CCTTEEEEEEEEEETTEEEEEEEESSSC--CEEEEEEEEET
T ss_pred CCceEEeccc-------eeEEEEEeccCcceeeeec---CCCCCCEEEEEEcCCCCEEEEEecCCcc--eeEEeeccccc
Confidence 5566666542 2377788888765543321 111111122 22367777777765432 22466677666
Q ss_pred CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCe
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 255 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 255 (507)
.................-.+++.-.++.+++.|+.+ +.|.+||+.+++-.... .......-..+.+ +++
T Consensus 255 ~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~iwd~~~~~~~~~~----~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-----NSIALVKLKDLSMSKIF----KQAHSFAITEVTISPDST 325 (365)
T ss_dssp TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEEEE----TTSSSSCEEEEEECTTSC
T ss_pred ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-----CEEEEEECCCCcEEEEe----cCcccCCEEEEEECCCCC
Confidence 655433211000001111223334566677888765 35889999887643310 0001111122333 457
Q ss_pred EEEEeccCCCCCcceEEEEECC
Q 010551 256 WYIVGGGDNNNGCQETIVLNMT 277 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~ 277 (507)
+++.|+.++ .+-++|+.
T Consensus 326 ~laS~S~D~-----tvrvw~ip 342 (365)
T 4h5i_A 326 YVASVSAAN-----TIHIIKLP 342 (365)
T ss_dssp EEEEEETTS-----EEEEEECC
T ss_pred EEEEEeCCC-----eEEEEEcC
Confidence 777766443 35566653
No 430
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=61.27 E-value=1e+02 Score=28.51 Aligned_cols=66 Identities=9% Similarity=0.006 Sum_probs=35.8
Q ss_pred CCEEEEEcCCCCCCCccCc-EEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCC
Q 010551 151 GSRLIIFGGEDRSRKLLND-VHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 229 (507)
Q Consensus 151 ~~~iy~~GG~~~~~~~~n~-~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 229 (507)
++.+++.|+.+ .. +.++|+.+.+-...-..|. ....-.+++...++.+++.|+.+ ..+.+||+...
T Consensus 206 ~g~~l~s~s~d------~~~v~iwd~~~~~~~~~~~~g~--h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD------GTIIRVFKTEDGVLVREFRRGL--DRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT------CSEEEEEETTTCCEEEEEECTT--CCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCC--CCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 45667777754 34 8889988765433211110 11112233333455577777654 35788887654
No 431
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=61.19 E-value=58 Score=25.61 Aligned_cols=22 Identities=5% Similarity=0.176 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH
Q 010551 466 TIENEVQILRQQKSAFEQEMER 487 (507)
Q Consensus 466 ~le~e~~~~~~~~~~~~~~~~~ 487 (507)
++++.++.++.+...+.+++++
T Consensus 106 ~l~~~l~~l~~~i~~~~~~l~~ 127 (133)
T 1fxk_C 106 KMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555543
No 432
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=60.95 E-value=1.2e+02 Score=29.02 Aligned_cols=148 Identities=6% Similarity=-0.042 Sum_probs=80.4
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE--ECCEEEEEcCCCCCCCccCcEEEEECCC
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLET 177 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~~iy~~GG~~~~~~~~n~~~~~d~~t 177 (507)
+++||+.-.. ...+.++++....-..+... .+..| ..+++ .++.||+.--.. .+.+++++++.
T Consensus 170 ~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~-~~~~P---~~iavdp~~g~ly~td~~~-----~~~I~~~~~dG 234 (400)
T 3p5b_L 170 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRE-NGSKP---RAIVVDPVHGFMYWTDWGT-----PAKIKKGGLNG 234 (400)
T ss_dssp TTEEEEEETT------TTEEEEECTTTCSEEEEEEC-SSCCE---EEEEEETTTTEEEEEECSS-----SCCEEEEETTS
T ss_pred CCceEEEECC------CCeEEEEeCCCCceEEEEeC-CCCCc---ceEEEecccCeEEEEeCCC-----CCEEEEEeCCC
Confidence 7899998432 34689999887765554421 11111 12233 257888764211 24699999875
Q ss_pred CcEEEeccCCCCCCCCCCceEEEE-cCCEEEEEcCCCCCCCCCcEEEEECCCCcEEeccc-CCCCCCCCCccEEEEECCe
Q 010551 178 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI-KGDLVTGRAGHAGITIDEN 255 (507)
Q Consensus 178 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~-~~~~p~~r~~~~~~~~~~~ 255 (507)
..=..+... .+. .-.++++- .++.||+.-. ..+.|+++|+....-..+.. .+..+ ..+++++.++.
T Consensus 235 ~~~~~~~~~-~l~---~P~glavd~~~~~lY~aD~-----~~~~I~~~d~dG~~~~~~~~~~~~l~---~P~gl~v~~~~ 302 (400)
T 3p5b_L 235 VDIYSLVTE-NIQ---WPNGITLDLLSGRLYWVDS-----KLHSISSIDVNGGNRKTILEDEKRLA---HPFSLAVFEDK 302 (400)
T ss_dssp CSCEEEECS-SCS---CEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCCEEEEECSSTTS---SEEEEEEETTE
T ss_pred CccEEEEEC-CCC---ceEEEEEEeCCCEEEEEEC-----CCCEEEEEeCCCCccEEEEeCCCCCC---CCEEEEEeCCE
Confidence 443333221 111 11223332 4677998633 23579999987544333211 11222 23467778889
Q ss_pred EEEEeccCCCCCcceEEEEECCCC
Q 010551 256 WYIVGGGDNNNGCQETIVLNMTKL 279 (507)
Q Consensus 256 l~v~GG~~~~~~~~~~~~~d~~~~ 279 (507)
+|+.-- ....++.+|..+.
T Consensus 303 lywtd~-----~~~~V~~~~~~~G 321 (400)
T 3p5b_L 303 VFWTDI-----INEAIFSANRLTG 321 (400)
T ss_dssp EEEEES-----SSCSEEEEESSSC
T ss_pred EEEecC-----CCCeEEEEEcCCC
Confidence 998852 1235777875444
No 433
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=60.94 E-value=1.1e+02 Score=28.59 Aligned_cols=183 Identities=10% Similarity=0.105 Sum_probs=86.0
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcCcEEEE-ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCCCCCCCC
Q 010551 117 MIVRFIDLETNLCGVMETSGKVPVTRGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 195 (507)
Q Consensus 117 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~ 195 (507)
..+.++|+.++.-...... ... -.+++. -++++++.|+. +.+.+++..++......... ......
T Consensus 157 ~~i~iwd~~~~~~~~~~~~---~~~--V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~--~~~~~v 222 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIET---RGE--VKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDF--DKNWSL 222 (365)
T ss_dssp CEEEEEETTTTEEEEEEEC---SSC--CCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCC--CTTEEE
T ss_pred CEEEEeECCCCcEEEEeCC---CCc--eEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecC--CCCCCE
Confidence 3588999999875543211 111 112222 24566665552 24777887777654432211 101111
Q ss_pred ceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEE--CCeEEEEeccCCCCCcceEEE
Q 010551 196 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIV 273 (507)
Q Consensus 196 ~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~ 273 (507)
.+++...++..++.++.++.. ...++.+|+.......... .........-.++.+ ++++++.|+.++ .+.+
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----~V~i 295 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRS-KQVTNRFKGITSMDVDMKGELAVLASNDN-----SIAL 295 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEE-EEEESSCSCEEEEEECTTSCEEEEEETTS-----CEEE
T ss_pred EEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceee-eeecCCCCCeEeEEECCCCCceEEEcCCC-----EEEE
Confidence 122334566666666544321 1246666766655443211 001111111122223 567788877543 4788
Q ss_pred EECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEccCCCCcCceEEEEECC
Q 010551 274 LNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 331 (507)
Q Consensus 274 ~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 331 (507)
+|+.+..-... .+.+. ......+...++..+++.|+.+ +.+-++++.
T Consensus 296 wd~~~~~~~~~-~~~gH------~~~V~~v~fSpdg~~laS~S~D----~tvrvw~ip 342 (365)
T 4h5i_A 296 VKLKDLSMSKI-FKQAH------SFAITEVTISPDSTYVASVSAA----NTIHIIKLP 342 (365)
T ss_dssp EETTTTEEEEE-ETTSS------SSCEEEEEECTTSCEEEEEETT----SEEEEEECC
T ss_pred EECCCCcEEEE-ecCcc------cCCEEEEEECCCCCEEEEEeCC----CeEEEEEcC
Confidence 99887653211 01111 1112233444444566667655 456667764
No 434
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=60.65 E-value=48 Score=32.06 Aligned_cols=80 Identities=23% Similarity=0.209 Sum_probs=35.6
Q ss_pred hHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHH
Q 010551 405 LTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 405 ~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~ 484 (507)
+.....++.++++.++..+++.+.+++.++..+.-... +.++..+ .+..-+++.+++++.+.=...+++.|++.+..-
T Consensus 311 L~~~~~~l~~~~~~~~~k~~~v~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~q~~~~~~~ 388 (406)
T 4dyl_A 311 LTSVTDELAVATEMVFRRQEMVTQLQQELRNEEENTHP-RERVQLL-GKRQVLQEALQGLQVALCSQAKLQAQQELLQTK 388 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT-TCGGGGH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-chHHHHH-hHHhhHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33334444555555555555555555555444321111 2122212 233344444444554444444455555555555
Q ss_pred HH
Q 010551 485 ME 486 (507)
Q Consensus 485 ~~ 486 (507)
++
T Consensus 389 ~~ 390 (406)
T 4dyl_A 389 LE 390 (406)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 435
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=60.54 E-value=50 Score=24.61 Aligned_cols=9 Identities=0% Similarity=-0.134 Sum_probs=3.3
Q ss_pred HHHHHHHhh
Q 010551 395 KEDKRVLEL 403 (507)
Q Consensus 395 ~~~~~~~~~ 403 (507)
+....+++.
T Consensus 21 ~~Ki~el~~ 29 (98)
T 2ke4_A 21 QQQLEERSR 29 (98)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 436
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=60.49 E-value=49 Score=24.49 Aligned_cols=9 Identities=22% Similarity=0.523 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 010551 467 IENEVQILR 475 (507)
Q Consensus 467 le~e~~~~~ 475 (507)
|+.|+..++
T Consensus 77 Le~EIatYr 85 (95)
T 3mov_A 77 LDMEISAYR 85 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333444333
No 437
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=60.23 E-value=57 Score=25.20 Aligned_cols=79 Identities=15% Similarity=0.111 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----------HHHHHHHHHHHhHHHH
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----------TIENEVQILRQQKSAF 481 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----------~le~e~~~~~~~~~~~ 481 (507)
..+|.+.-.+++.-.......+.+.+..-+.-+.++.+.+....++.+++.+++ +....+.++..-+..+
T Consensus 8 ~~~l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~~keL 87 (119)
T 3etw_A 8 VGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKL 87 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhhc
Q 010551 482 EQEMERATS 490 (507)
Q Consensus 482 ~~~~~~~~~ 490 (507)
+.++..++.
T Consensus 88 d~~ik~qek 96 (119)
T 3etw_A 88 EAEMEQQKA 96 (119)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
No 438
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=59.96 E-value=37 Score=22.95 Aligned_cols=57 Identities=23% Similarity=0.179 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHH
Q 010551 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQT 466 (507)
Q Consensus 410 ~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~ 466 (507)
.+..+|..++.+.+.++.++..-.-..+..+.+--+--.+||.+.+-.++..-.+.+
T Consensus 3 kQNKeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k 59 (74)
T 2q6q_A 3 QQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEK 59 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHh
No 439
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=59.91 E-value=20 Score=26.24 Aligned_cols=83 Identities=16% Similarity=0.184 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
...+.........++..+...|...++-+...+..+.++++.+...+..+..+.-|+.+...+..--.......|.....
T Consensus 5 ~~~~~~~~~~~~~ei~~L~~~L~~AEeaL~~KQ~~ideLKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaaREk~~~E 84 (96)
T 3fx0_A 5 KSSVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEK 84 (96)
T ss_dssp ---------------------CCSSTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred ccc
Q 010551 492 QTQ 494 (507)
Q Consensus 492 ~~q 494 (507)
.++
T Consensus 85 Ke~ 87 (96)
T 3fx0_A 85 KEL 87 (96)
T ss_dssp TSC
T ss_pred HHH
No 440
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=59.42 E-value=85 Score=31.22 Aligned_cols=100 Identities=13% Similarity=0.117 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhhhhHHHHhhh-hhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHH--------HHHHH
Q 010551 389 TDIDAIKEDKRVLELSLTEVRTEN-SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQI--------AELQK 459 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~--------~e~~~ 459 (507)
.++..+.+....+.+.+..-..+. ..+-..+-++..+..++..+++..+.+.-+..+.+.++...- .+.++
T Consensus 41 lD~~~ir~n~~~v~~~l~~R~~~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~ 120 (501)
T 1wle_A 41 LDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQS 120 (501)
T ss_dssp CCHHHHHHSHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHH
T ss_pred cCHHHHHhCHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHH
Q ss_pred HHHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010551 460 MLESSQTIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 460 ~~~~~~~le~e~~~~~~~~~~~~~~~~~~ 488 (507)
-..+..++.+++..+.+++..+++++++.
T Consensus 121 l~~~~~~l~~~i~~l~~~~~~~~~~l~~~ 149 (501)
T 1wle_A 121 LRARGREIRKQLTLLYPKEAQLEEQFYLR 149 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 441
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=59.37 E-value=47 Score=23.90 Aligned_cols=57 Identities=12% Similarity=0.219 Sum_probs=0.0
Q ss_pred hHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHHHh
Q 010551 432 ELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 432 el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~-~le~e~~~~~~~~~~~~~~~~~~ 488 (507)
+++..+.++..++..+.+.+.......+..+..- .++.++++++.+.+...++-++.
T Consensus 2 el~~l~~~~~sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~L 59 (84)
T 1gk4_A 2 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDL 59 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 442
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=58.90 E-value=14 Score=35.82 Aligned_cols=56 Identities=11% Similarity=0.160 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH
Q 010551 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 410 ~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
.+-..|+.++.++.++.+++++++++.+.+++.+++++.+.+.+-..+.-+++++.
T Consensus 3 ~~~~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~ 58 (412)
T 3u06_A 3 SMHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLR 58 (412)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
No 443
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=58.85 E-value=27 Score=34.40 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhhhhHHHHh-hhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHH
Q 010551 389 TDIDAIKEDKRVLELSLTEVRT-ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTI 467 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~l 467 (507)
.++..+.+....+.+.+..-.. ....+-..+-++..+..++..++++.+.+.-+..+++.+++..-++.++.+.+..++
T Consensus 2 ld~~~~r~n~~~~~~~~~~R~~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~ 81 (455)
T 2dq0_A 2 LDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREI 81 (455)
T ss_dssp CCHHHHHHCHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHH
T ss_pred CCHHHHHhCHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Q ss_pred HHHHHHHHHhHHHHHHHHHHh
Q 010551 468 ENEVQILRQQKSAFEQEMERA 488 (507)
Q Consensus 468 e~e~~~~~~~~~~~~~~~~~~ 488 (507)
.+++..+.+++..+++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~ 102 (455)
T 2dq0_A 82 VKRIGELENEVEELKKKIDYY 102 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
No 444
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=58.26 E-value=39 Score=22.77 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhh
Q 010551 394 IKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF 448 (507)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~ 448 (507)
+...+................|+.+.+.++.++.++..++..++.++..++..+.
T Consensus 7 rerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~ 61 (63)
T 2wt7_A 7 RERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILA 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 445
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=58.08 E-value=1.1e+02 Score=27.67 Aligned_cols=172 Identities=11% Similarity=0.023 Sum_probs=0.0
Q ss_pred ccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEECCEEEEEec
Q 010551 29 YKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGG 108 (507)
Q Consensus 29 ~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG 108 (507)
..|+++.-++.||.||-...++.---..+ ......+.. -..|+++..++.||.||-
T Consensus 72 ~~hs~~l~~G~v~~wG~n~~Gqlg~P~~~----~~~v~~ia~--------------------G~~hs~al~~G~v~~wG~ 127 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNEDGQTTVPAEA----RSGVDAIAA--------------------GAWASYALKDGKVIAWGD 127 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTSTTCCCGGG----SSSEEEEEE--------------------ETTEEEEEETTEEEEEEC
T ss_pred CCEEEEEECCEEEEeeCCCCCCCCCCccc----CCCeEEEEC--------------------cCCEEEEEeCCeEEEecC
Q ss_pred cCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCC
Q 010551 109 HYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 188 (507)
Q Consensus 109 ~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~ 188 (507)
.......... ........+. .-..|+++..++.+|.+|-......-..... ......+.
T Consensus 128 n~~gqlg~~~-----~~~~~i~~i~-------~G~~~~~~l~~G~v~~wG~n~~gqlg~p~~~-----~~~v~~i~---- 186 (282)
T 3qhy_B 128 DSDGQTTVPA-----EAQSGVTALD-------GGVYTALAVKNGGVIAWGDNYFGQTTVPAEA-----QSGVDDVA---- 186 (282)
T ss_dssp CTTSTTSCCG-----GGGSSEEEEE-------ECSSEEEEEETTEEEEEECCTTSTTSCCGGG-----GSSEEEEE----
T ss_pred CCCCcCCCCc-----cCCCCeEEEE-------cccCEEEEEECCEEEEecCCCCCCCCCceec-----CCCeEEEE----
Q ss_pred CCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCCCCCCCccEEEEECCeEEEEe
Q 010551 189 PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVG 260 (507)
Q Consensus 189 ~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 260 (507)
.-..|+++. .++.+|.+|-......-... ...........-..|++++.++.+|..|
T Consensus 187 ---~G~~hs~al-~~G~v~~wG~n~~gqlg~p~-----------~~~~~v~~i~~G~~h~~al~~g~v~~wG 243 (282)
T 3qhy_B 187 ---GGIFHSLAL-KDGKVIAWGDNRYKQTTVPT-----------EALSGVSAIASGEWYSLALKNGKVIAWG 243 (282)
T ss_dssp ---ECSSEEEEE-ETTEEEEEECCTTSTTCCCG-----------GGGSSCCEEEECSSCEEEEETTEEEEES
T ss_pred ---ecCCEEEEE-ECCeEEEEECCCCCCCCCCc-----------ccCCCceEEEcCCCEEEEEECCEEEEec
No 446
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=58.00 E-value=18 Score=19.34 Aligned_cols=27 Identities=30% Similarity=0.486 Sum_probs=0.0
Q ss_pred hHHHhhhhhhhhHHHHHHHHHHHHhHH
Q 010551 439 QLVAERSRCFKLEAQIAELQKMLESSQ 465 (507)
Q Consensus 439 ~~~~~~~~~~~~e~~~~e~~~~~~~~~ 465 (507)
+-+.+++++..++..+|.+++++..++
T Consensus 2 ewealekkcaalesklqalekkleale 28 (31)
T 3ljm_A 2 EWEALEKKCAALESKLQALEKKLEALE 28 (31)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH
No 447
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=57.65 E-value=62 Score=26.31 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHH----HhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSV----QGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~----~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~ 481 (507)
..+|...|+.-..+.+-.++.-+++ +.-+.+-++.-..+++.+-...--.+..+.+++++.+++++++.+
T Consensus 70 lTqL~nrL~~wlsQ~em~~qks~EFSD~~qTaL~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L 143 (201)
T 3u0c_A 70 LTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSEL 143 (201)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
No 448
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=57.46 E-value=54 Score=24.25 Aligned_cols=78 Identities=13% Similarity=0.178 Sum_probs=0.0
Q ss_pred hhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhh-hhHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010551 402 ELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF-KLEAQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 402 ~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~-~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~ 479 (507)
+..+...+.+...|+..+.+.+.......++++..-..++.+-.+.. +++.+++|.+.-+...-.|+.|+..+++-++
T Consensus 11 ~~~~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatYrkLLE 89 (95)
T 3mov_A 11 ENLYFQGQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLE 89 (95)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
No 449
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=57.43 E-value=72 Score=25.80 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=0.0
Q ss_pred cchhhHHHHHHHHHHHhhhhHHHHhhhhhh---HHHHHHhhccchhHHHhH-----------------------------
Q 010551 386 DVRTDIDAIKEDKRVLELSLTEVRTENSRF---REKIDEVNSTHSELSKEL----------------------------- 433 (507)
Q Consensus 386 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l---~~~l~~~~~~~~e~~~el----------------------------- 433 (507)
.++.+++++.+..+.++..+.........| +.++.+...-++.++.--
T Consensus 6 ~~~~~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~V~v~ 85 (151)
T 2zdi_C 6 QNNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNNAIVS 85 (151)
T ss_dssp SSTTHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCEEEEE
Q ss_pred --------HHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHH
Q 010551 434 --------SSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSA 480 (507)
Q Consensus 434 --------~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~ 480 (507)
....+-.+-.++++..++..+..+++.+...++.-+.++...+++++
T Consensus 86 lG~g~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~~ 140 (151)
T 2zdi_C 86 VGSGYAVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQ 140 (151)
T ss_dssp EETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eCCCeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 450
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=57.42 E-value=17 Score=20.87 Aligned_cols=31 Identities=6% Similarity=0.138 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHHHhhccc
Q 010551 462 ESSQTIENEVQILRQQKSAFEQEMERATSVQ 492 (507)
Q Consensus 462 ~~~~~le~e~~~~~~~~~~~~~~~~~~~~~~ 492 (507)
+++.+++.+++++..++..++.|+.+.+..+
T Consensus 1 ~RMnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 1 MKLKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHh
No 451
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=57.38 E-value=64 Score=25.80 Aligned_cols=68 Identities=9% Similarity=0.020 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010551 412 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 412 ~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~ 479 (507)
.+++++.+.............++.++.+.+.+++++.+++..++.++.++...++...+.++.....+
T Consensus 62 L~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 129 (142)
T 3gp4_A 62 IEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFN 129 (142)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
No 452
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=57.06 E-value=42 Score=24.28 Aligned_cols=65 Identities=17% Similarity=0.253 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHH
Q 010551 394 IKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQ 458 (507)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~ 458 (507)
++.+.+...+.+.+......+++.=.+.+.+-.....+....+..++.....++++|+++++++.
T Consensus 19 ~q~~le~~r~~ir~eI~KElKiKeGaENL~katt~~kk~~~~V~~eL~~sn~kl~~L~~eL~eL~ 83 (86)
T 1cxz_B 19 VQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQELH 83 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 453
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=57.03 E-value=15 Score=32.59 Aligned_cols=65 Identities=11% Similarity=0.166 Sum_probs=0.0
Q ss_pred HhhhhhhHHHHHHhhccchhH---------HHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHH
Q 010551 409 RTENSRFREKIDEVNSTHSEL---------SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQI 473 (507)
Q Consensus 409 ~~~~~~l~~~l~~~~~~~~e~---------~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~ 473 (507)
..+...+++++..+.+++++. +..+.+.+.++..+..+..+|...+.++++++.++++.-+++++
T Consensus 23 ~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 23 AAELEQLRREAAVLREQLENAVGSHAPTRSARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhhhhcccCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 454
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=57.00 E-value=8.1 Score=32.53 Aligned_cols=45 Identities=22% Similarity=0.397 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 010551 449 KLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQT 493 (507)
Q Consensus 449 ~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~~~~~~~~ 493 (507)
.|..+++++++.++.+..|..++++++.+++.+.+.+.+++....
T Consensus 3 ~l~~~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~~~~~~~~ 47 (182)
T 3kqg_A 3 TLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQNDILQ 47 (182)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 455
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=56.96 E-value=80 Score=25.85 Aligned_cols=99 Identities=12% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchh----------------HHHhHHHHHhhHHHhhhhhhhhHHHH
Q 010551 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSE----------------LSKELSSVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e----------------~~~el~~~~~~~~~~~~~~~~~e~~~ 454 (507)
+..|..++..+.+.-.+-..-....+.++..+..++.. ++..+.+.+.......+++..-++.+
T Consensus 29 ~~~le~ek~~l~~~e~~r~k~~~h~~~k~~qlre~~d~gtt~~~i~~m~~yI~llrErea~lEqkVaeq~e~Ve~e~q~L 108 (169)
T 3k29_A 29 RRLLELEQEKLRERESERDKVKNHYMQKIRQLREQLDDGTTSDAILKMKAYIKVVAIQLSEEEEKVNKQKENVLAASKEL 108 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010551 455 AELQKMLESSQTIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 455 ~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
++-++.+.+..+...++ +++++....+...+.+..
T Consensus 109 e~ar~el~qArke~eKf-elHrqiwqaE~kre~E~q 143 (169)
T 3k29_A 109 ERAEVELTKRRKEEEKT-RLHKEEWMKEALKEEARQ 143 (169)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
No 456
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=56.94 E-value=27 Score=33.88 Aligned_cols=55 Identities=16% Similarity=0.081 Sum_probs=0.0
Q ss_pred ccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010551 424 STHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQK 478 (507)
Q Consensus 424 ~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~ 478 (507)
.+...++.|+.+++++.++++++.++++.+++++++++.+.+.+-+++.-..+++
T Consensus 3 ~~~~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l 57 (412)
T 3u06_A 3 SMHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDL 57 (412)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 457
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=56.92 E-value=1.4e+02 Score=28.55 Aligned_cols=247 Identities=12% Similarity=-0.019 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEe-------
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILG------- 107 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~G------- 107 (507)
++.+|+.-.. .....+.+.++|+.+++-...-..+ ..-| ++.. +..+|+..
T Consensus 44 ~~~vyV~~~~-~~~~~~~V~ViD~~t~~v~~~I~vG------------------~~P~-va~spDG~~lyVan~~~~r~~ 103 (386)
T 3sjl_D 44 ARRVYVNDPA-HFAAVTQQFVIDGEAGRVIGMIDGG------------------FLPN-PVVADDGSFIAHASTVFSRIA 103 (386)
T ss_dssp TTEEEEEECG-GGCSSEEEEEEETTTTEEEEEEEEC------------------SSCE-EEECTTSSCEEEEEEEEEETT
T ss_pred CCEEEEEcCc-ccCCCCEEEEEECCCCeEEEEEECC------------------CCCc-EEECCCCCEEEEEcccccccc
Q ss_pred -ccCCCCCCcceEEEEECCCCcEEEeecCCCCCC--------CCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCC
Q 010551 108 -GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV--------TRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 178 (507)
Q Consensus 108 -G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~--------~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~ 178 (507)
|.. .+.+.++|+.|++-..-- ..|. .-.+.+...-+.++|+..... .+.+.++|+.++
T Consensus 104 ~G~~-----~~~VsviD~~t~~v~~~I---~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-----~~~VsVID~~t~ 170 (386)
T 3sjl_D 104 RGER-----TDYVEVFDPVTLLPTADI---ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-----APAVGVVDLEGK 170 (386)
T ss_dssp EEEE-----EEEEEEECTTTCCEEEEE---EETTCCCCCBSCCGGGEEECTTSSEEEEEECSS-----SCEEEEEETTTT
T ss_pred cCCC-----CCEEEEEECCCCeEEEEE---ECCCccccccCCCCceEEEcCCCCEEEEEEcCC-----CCeEEEEECCCC
Q ss_pred cEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCC-CcEEecccCCCCCCCCCccEEEEE---CC
Q 010551 179 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITI---DE 254 (507)
Q Consensus 179 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~---~~ 254 (507)
+-..--..+.+ ......+...++.+.+.+ .+..+++.+ ++-.........+..+..+....+ ++
T Consensus 171 ~vv~tI~v~g~------~~~~P~g~~~~~~~~~DG------~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 171 AFKRMLDVPDC------YHIFPTAPDTFFMHCRDG------SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEEEECCSE------EEEEEEETTEEEEEETTS------CEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred cEEEEEECCCc------ceeecCCCceeEEECCCC------CEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Q ss_pred eEEEEeccCCCCCcceEEEEECCCCcEEEeccCC-----CCCCCCCCCCceEEEEEcCceEEEEEccCCCCcC-----ce
Q 010551 255 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK-----GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYN-----NE 324 (507)
Q Consensus 255 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~v~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~-----~~ 324 (507)
+++.+ .....++++|..+..-+.+.... ...+..+.+-.....+....+.+||.-+..+... +.
T Consensus 239 ~~~~v------s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~ 312 (386)
T 3sjl_D 239 RLVWP------TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 312 (386)
T ss_dssp EEEEE------BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEE
T ss_pred cEEEE------eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCE
Q ss_pred EEEEECCCCC
Q 010551 325 VFVMRLKPRD 334 (507)
Q Consensus 325 ~~~~~~~~~~ 334 (507)
++++|+.++.
T Consensus 313 V~viD~~t~k 322 (386)
T 3sjl_D 313 VVVLDAKTGE 322 (386)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCe
No 458
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=56.91 E-value=47 Score=23.80 Aligned_cols=57 Identities=14% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhh--hHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHH
Q 010551 393 AIKEDKRVLELS--LTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEA 452 (507)
Q Consensus 393 ~l~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~ 452 (507)
.+..+....++. .....+++..|++.+ ..++..-.++++..+.++...+.++.+|+.
T Consensus 21 aFgKrEaA~Ee~YfrqkekEqL~~LKkkl---~~el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 21 AFGKREQAEEERYFRARAKEQLAALKKHK---ENEISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
No 459
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=56.11 E-value=75 Score=32.66 Aligned_cols=159 Identities=13% Similarity=0.045 Sum_probs=0.0
Q ss_pred eEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEE-ECCEEEEEeccC
Q 010551 32 AAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHY 110 (507)
Q Consensus 32 ~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~ 110 (507)
+++...+.+|+|-| +.+|.++.....-......... ....+.....+... .++++|+|-|..
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~----------wp~LP~~IDAA~~~~~~~k~yFFkG~~ 510 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF----------WPELPEKIDAVYEAPQEEKAVFFAGNE 510 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGT----------CTTSCSSCSBCCEETTTTEEEEEETTE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceecccc----------CCCCCccceEEEEECCCCEEEEEecCE
Q ss_pred CCCCCcceEEEEE---CCCCcEEEeecCCCCCCCCcCcEEEE--ECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEe--
Q 010551 111 KKSSDSMIVRFID---LETNLCGVMETSGKVPVTRGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAV-- 183 (507)
Q Consensus 111 ~~~~~~~~~~~yd---~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~-- 183 (507)
.|+|+ +..+-=+.+...|-+..+..--++.. .++++|+|-| +..|+||..+..-..-
T Consensus 511 --------yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG--------~~ywryd~~~~~vd~gYP 574 (631)
T 1ck7_A 511 --------YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGFP 574 (631)
T ss_dssp --------EEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET--------TEEEEEETTTTEECTTCC
T ss_pred --------EEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC--------CEEEEEcCCcccccCCCC
Q ss_pred -ccCCCCCCCCCCceEEEEcC--CEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 184 -EVTQTPPAPRYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 184 -~~~~~~p~~r~~~~~~~~~~--~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
.+....+.-...--++...+ +++|+|-| +..|+||..+..
T Consensus 575 k~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 575 KLIADAWNAIPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 617 (631)
T ss_dssp EETTTSCSSCCTTCCEEECCTTSCBCEEEET-------TEEECCBTTBTT
T ss_pred cchHhhcCCCCCCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccce
No 460
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=55.93 E-value=28 Score=23.67 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHHHHhh
Q 010551 445 SRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEMERAT 489 (507)
Q Consensus 445 ~~~~~~e~~~~e~~~~~~~~~---------~le~e~~~~~~~~~~~~~~~~~~~ 489 (507)
++..+++.++.++.+++...- +|.+++..+..+++.+.++++..+
T Consensus 6 ~~~~~l~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~~ 59 (65)
T 3sja_C 6 KKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 59 (65)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
No 461
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=55.89 E-value=57 Score=23.80 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=0.0
Q ss_pred HHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHH
Q 010551 406 TEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 406 ~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~ 485 (507)
.+-+.-..-|+.+|......+.+.+-+..--.+-...++.-+.+.+.+ -+++..++++|+-|+..+.++++...-+.
T Consensus 14 ~ECrNvT~lLq~qLT~Aq~~l~~~eaQAaTCNqTV~tL~~SL~kekaq---~q~qq~~v~elqgEI~~Lnq~Lqda~~~~ 90 (99)
T 3ni0_A 14 AECRNTTHLLQRQLTRTQDSLLQAETQANSCNLTVVTLQESLEKKVSQ---ALEQQARIKELENEVTKLNQELENLRIQK 90 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred H
Q 010551 486 E 486 (507)
Q Consensus 486 ~ 486 (507)
|
T Consensus 91 ~ 91 (99)
T 3ni0_A 91 E 91 (99)
T ss_dssp H
T ss_pred H
No 462
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=55.51 E-value=68 Score=30.51 Aligned_cols=92 Identities=11% Similarity=0.157 Sum_probs=0.0
Q ss_pred hhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHH----------------HHHhHH-
Q 010551 403 LSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQK----------------MLESSQ- 465 (507)
Q Consensus 403 ~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~----------------~~~~~~- 465 (507)
..+.+...+........+.+..+.....++++..++..+...+.+.--+.|++-.++ +++.+.
T Consensus 126 ~~l~e~~~~~~~~~~~~~~~~~~~~~~~~e~~~k~~a~~af~~~~~~f~~q~~~~e~~~~~~~~~~~~~~~~~e~~~~~~ 205 (373)
T 3hhm_B 126 KKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMH 205 (373)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcChHHHHHHHH
Q ss_pred ---HHHHHHHHHHHhHHHHHHHHHHhhccccc
Q 010551 466 ---TIENEVQILRQQKSAFEQEMERATSVQTQ 494 (507)
Q Consensus 466 ---~le~e~~~~~~~~~~~~~~~~~~~~~~~q 494 (507)
.|+..++++.+.+++++++++.+....++
T Consensus 206 n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 237 (373)
T 3hhm_B 206 NYDKLKSRISEIIDSRRRLEEDLKKQAAEYRE 237 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 463
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=55.43 E-value=1.5e+02 Score=28.40 Aligned_cols=221 Identities=10% Similarity=-0.033 Sum_probs=0.0
Q ss_pred CeEeeCCCCceEEeecCCCCCCccccceEEEECCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCC
Q 010551 5 SWHLELPYDLWVTLPVSGARPSPRYKHAAAVFDQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGL 84 (507)
Q Consensus 5 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~ 84 (507)
++++|+....-..+.. ....++ .+...-++.||+....... .++.||+.++.-.......
T Consensus 154 I~~id~~~g~~~~~~~--~~~~~~--ia~~~~g~~l~~~d~~~~~----~I~~~d~~~~~~~~~~g~~------------ 213 (409)
T 3hrp_A 154 VRLISVDDNKVTTVHP--GFKGGK--PAVTKDKQRVYSIGWEGTH----TVYVYMKASGWAPTRIGQL------------ 213 (409)
T ss_dssp EEEEETTTTEEEEEEE--TCCBCB--CEECTTSSEEEEEBSSTTC----EEEEEEGGGTTCEEEEEEC------------
T ss_pred EEEEECCCCEEEEeec--cCCCCc--eeEecCCCcEEEEecCCCc----eEEEEEcCCCceeEEeeec------------
Q ss_pred cCCCCCccceeEEEE-CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcC---cEEEEE-CCEEEEEcC
Q 010551 85 LEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGG---HSVTLV-GSRLIIFGG 159 (507)
Q Consensus 85 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~---~~~~~~-~~~iy~~GG 159 (507)
......+..+.++.- ++.||+... ...+++||+.++....+...+........ +.++.- ++.||+...
T Consensus 214 ~~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 214 GSTFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp CTTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred cchhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Q ss_pred CCCCCCccCcEEEEECCCCcEEEeccCCCCCC----------CCCCceEEEEcCCEEEEEcC-CCCCCCCCcEEEEECCC
Q 010551 160 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA----------PRYDHSAALHANRYLIVFGG-CSHSIFFNDLHVLDLQT 228 (507)
Q Consensus 160 ~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~p~----------~r~~~~~~~~~~~~l~v~GG-~~~~~~~~~i~~~d~~~ 228 (507)
. .+.+++|++... ...+...+..+. -..-.++++-.++.||+... .+ +.|.+||+.+
T Consensus 287 ~------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-----~~I~~~~~~~ 354 (409)
T 3hrp_A 287 N------LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-----YCLRKLDILD 354 (409)
T ss_dssp T------TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT-----CEEEEEETTT
T ss_pred C------CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC-----CEEEEEECCC
Q ss_pred CcEEecccCCCCCC----------CCCccEEEEEC-CeEEEEeccCC
Q 010551 229 NEWSQPEIKGDLVT----------GRAGHAGITID-ENWYIVGGGDN 264 (507)
Q Consensus 229 ~~W~~~~~~~~~p~----------~r~~~~~~~~~-~~l~v~GG~~~ 264 (507)
+....+...+.... -...+.+++-. +.|||....+.
T Consensus 355 G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~ 401 (409)
T 3hrp_A 355 GYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK 401 (409)
T ss_dssp TEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred CEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC
No 464
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=55.37 E-value=10 Score=34.14 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=0.0
Q ss_pred hhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010551 438 GQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKS 479 (507)
Q Consensus 438 ~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~ 479 (507)
..+..++++-++|++++.++++++.+.+++++|.++|++.+.
T Consensus 19 ~~~~~l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL~ 60 (255)
T 2j5u_A 19 VDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLD 60 (255)
T ss_dssp -------CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 465
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=55.27 E-value=83 Score=25.55 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHH
Q 010551 406 TEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 406 ~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~~ 485 (507)
.....-..+..+-...+..-+.-++.|+...++-.+.++.-....+.++.+.++.+...+....++.+..+++...-+.|
T Consensus 68 ~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~sL 147 (152)
T 4fla_A 68 EAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQSL 147 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
No 466
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=55.13 E-value=51 Score=23.08 Aligned_cols=67 Identities=12% Similarity=0.221 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhhHHHHhhhhhh-HHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHH
Q 010551 392 DAIKEDKRVLELSLTEVRTENSRF-REKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQ 458 (507)
Q Consensus 392 ~~l~~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~ 458 (507)
..|.+-+.+.+......+.+.+.. +.+++++......-..++...+.++..++..++.|+.+++-++
T Consensus 9 ~il~eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 9 AAMRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 467
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=54.99 E-value=53 Score=23.24 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=0.0
Q ss_pred hhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010551 427 SELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 427 ~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~ 481 (507)
++.++-|...-.++.++.+++..++.++..++++-+.+.++-.+.+.+-.-++.+
T Consensus 23 E~RR~AL~eaL~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~~~laevl~~l 77 (79)
T 2zxx_A 23 EQRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYMAEVIERL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 468
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=54.89 E-value=83 Score=30.67 Aligned_cols=80 Identities=10% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 010551 395 KEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQIL 474 (507)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~ 474 (507)
+..+++-++...+ +.-....-++.+++++++.+.||.+........+++..+.++-+.+++-.|+.+.++..+....
T Consensus 295 elkqrqeee~r~~---qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~ 371 (551)
T 2b5u_A 295 QVKQRQDEENRRQ---QEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAE 371 (551)
T ss_dssp HHHHHHHHHHHHH---HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHh
Q ss_pred HHh
Q 010551 475 RQQ 477 (507)
Q Consensus 475 ~~~ 477 (507)
..+
T Consensus 372 ~~~ 374 (551)
T 2b5u_A 372 IKQ 374 (551)
T ss_dssp HHH
T ss_pred hhh
No 469
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=54.63 E-value=52 Score=22.97 Aligned_cols=71 Identities=23% Similarity=0.259 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 394 IKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
+-.+.+.+.....+...-..-|.-.-..+-...+++.-+....+.++...+....+++..+.|+++++++.
T Consensus 7 mgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeElkr~ 77 (77)
T 2w83_C 7 MGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEELRKA 77 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 470
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=54.54 E-value=27 Score=22.94 Aligned_cols=51 Identities=20% Similarity=0.218 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHH
Q 010551 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKM 460 (507)
Q Consensus 410 ~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~ 460 (507)
++..+++.-+..-+..++++.+--....+|+-..++++.+++.+...++++
T Consensus 13 qeylevK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~q 63 (63)
T 2w6a_A 13 QEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQP 63 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhccC
No 471
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=54.42 E-value=22 Score=34.75 Aligned_cols=71 Identities=13% Similarity=0.323 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 390 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
++..+.++++.+.....+.+.+.+.+.+++..++..-++ .+++..+...+++++..++.++.++++++...
T Consensus 31 ~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 2dq3_A 31 KVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREGKD----TTEIQNRVKELKEEIDRLEEELRKVEEELKNT 101 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSSCSC----TTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 472
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=54.13 E-value=1.5e+02 Score=28.08 Aligned_cols=153 Identities=12% Similarity=0.092 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCCCccccCCCcCCCCCccceeEEEE--CCEEEEEeccCCCCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSS 114 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 114 (507)
++.+++.|+.++. +.+||+.++.-...-..... .....++.+ ++.+++.|+.+..
T Consensus 181 ~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~~~dg~-- 237 (437)
T 3gre_A 181 EKSLLVALTNLSR-----VIIFDIRTLERLQIIENSPR----------------HGAVSSICIDEECCVLILGTTRGI-- 237 (437)
T ss_dssp SCEEEEEEETTSE-----EEEEETTTCCEEEEEECCGG----------------GCCEEEEEECTTSCEEEEEETTSC--
T ss_pred CCCEEEEEeCCCe-----EEEEeCCCCeeeEEEccCCC----------------CCceEEEEECCCCCEEEEEcCCCe--
Q ss_pred CcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEE-----CCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCCCC
Q 010551 115 DSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLV-----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP 189 (507)
Q Consensus 115 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-----~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~~~ 189 (507)
+.+||+.++.....- ..+....-.+++.. ++.+++.|+.++. +.+||+.+..-...-.....
T Consensus 238 ----i~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~------i~iwd~~~~~~~~~~~~~~~ 304 (437)
T 3gre_A 238 ----IDIWDIRFNVLIRSW---SFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF------LTIWNFVKGHCQYAFINSDE 304 (437)
T ss_dssp ----EEEEETTTTEEEEEE---BCTTCEEEEEEEECTTTCTTEEEEEEESTTEE------EEEEETTTTEEEEEEESSSS
T ss_pred ----EEEEEcCCccEEEEE---ecCCCCceEEEEeccccCCCccEEEEEcCCCc------EEEEEcCCCcEEEEEEcCCC
Q ss_pred CC---------------------CCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010551 190 PA---------------------PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 230 (507)
Q Consensus 190 p~---------------------~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 230 (507)
.. .......+.+.++.+++.||.+ ..+.+||+.+.+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 305 QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred CCccceecccccccccceecccccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
No 473
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=54.03 E-value=1.6e+02 Score=30.91 Aligned_cols=162 Identities=12% Similarity=0.057 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCccCCceEEEEccCC--ce--eeeccccccCCCccccCCCcCCCCCccceeEE-EECCEEEEEeccCC
Q 010551 37 DQKLYIVGGSRNGRFLSDVQVFDLRSL--AW--SNLRLETELDADKTEDSGLLEVLPPMSDHCMV-KWGTKLLILGGHYK 111 (507)
Q Consensus 37 ~~~iyi~GG~~~~~~~~~~~~~d~~~~--~W--~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~ 111 (507)
+..|++...... .+.++++|+.+. .+ +.+.... .-..++.. ..++.||+..-..
T Consensus 282 g~~l~~~~~~~~---~~~l~~~d~~~~~~~~~~~~l~~~~-----------------~~~~~s~~~~~g~~l~~~t~~~- 340 (751)
T 2xe4_A 282 TNTLCIGSQSPE---TAEVHLLDLRKGNAHNTLEIVRPRE-----------------KGVRYDVQMHGTSHLVILTNEG- 340 (751)
T ss_dssp SSEEEEEEECSS---CEEEEEEESSSCTTCCCEEESSCCC-----------------TTCCEEEEEETTTEEEEEECTT-
T ss_pred CCEEEEEecCCC---CceEEEEECCCCCCCceeEEeecCC-----------------CCceEEEeeeeCCEEEEEeCCC-
Q ss_pred CCCCcceEEEEECCC-CcEEE-eecCCCCCCCCcCcEEEEECCEEEEEcCCCCCCCccCcEEEEEC-------CCCc-EE
Q 010551 112 KSSDSMIVRFIDLET-NLCGV-METSGKVPVTRGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL-------ETMT-WD 181 (507)
Q Consensus 112 ~~~~~~~~~~yd~~t-~~W~~-~~~~g~~p~~r~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~-------~t~~-W~ 181 (507)
......++.+|+.+ ..|+. +. +......-......++.|++..-.+. ...++++|+ .+.. -.
T Consensus 341 -~a~~~~L~~~d~~~~~~~~~~li---~~~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~ 412 (751)
T 2xe4_A 341 -GAVNHKLLIAPRGQPSDWSHVLV---DHSEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLR 412 (751)
T ss_dssp -TCTTCEEEEEETTSTTCCCCEEE---CCCSSEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCE
T ss_pred -CCCCcEEEEEcCCCcccceeeEE---CCCCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccce
Q ss_pred EeccCCCCCCCCCCceE------EEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEec
Q 010551 182 AVEVTQTPPAPRYDHSA------ALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 234 (507)
Q Consensus 182 ~~~~~~~~p~~r~~~~~------~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 234 (507)
.+ ..|...+.... ..-++..+|.+.+..... .++.||+.++..+.+
T Consensus 413 ~l----~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~---~~~~~d~~~~~~~~l 464 (751)
T 2xe4_A 413 EV----VMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPN---TWFDVSPQDHSRTAV 464 (751)
T ss_dssp EC----CCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEE---EEEEECTTTCCEEEE
T ss_pred EE----CCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCC---EEEEEECCCCcEEEE
No 474
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=53.65 E-value=1.3e+02 Score=27.18 Aligned_cols=213 Identities=11% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCCCeEeeCCCCceEEeecCCCC----CCccccceEEEE-CCEEEEEcCCCCCccCCceEEEEccCCceeeeccccccCC
Q 010551 2 DSGSWHLELPYDLWVTLPVSGAR----PSPRYKHAAAVF-DQKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDA 76 (507)
Q Consensus 2 ~~~~~~~d~~~~~W~~~~~~~~~----p~~r~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 76 (507)
|..+|+-|...++=.++...+.. +.+...+.+++. ++.||+....... ..++.||+.+++...+......
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~---~~v~~~d~~~g~~~~~~~~~~~-- 116 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADS---IPVVSLVKSDGTVETLLTLPDA-- 116 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTS---CEEEEEECTTSCEEEEEECTTC--
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCc---ceEEEEcCCCCeEEEEEeCCCc--
Q ss_pred CccccCCCcCCCCCccceeEEEECCEEEEEeccCCCCCCcceEEEEECCCCcEEEe---------ecCCCCCCCCcCcEE
Q 010551 77 DKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM---------ETSGKVPVTRGGHSV 147 (507)
Q Consensus 77 ~~~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~---------~~~g~~p~~r~~~~~ 147 (507)
+.....+...+...++.-.. ...+|++|+.++.-+.. ...+.++.+..-
T Consensus 117 --------------~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--- 174 (306)
T 2p4o_A 117 --------------IFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--- 174 (306)
T ss_dssp --------------SCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE---
T ss_pred --------------cccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc---
Q ss_pred EEECCEEEEEcCCCCCCCccCcEEEEECCC-CcEEEeccCCCCCCCCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEEC
Q 010551 148 TLVGSRLIIFGGEDRSRKLLNDVHFLDLET-MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL 226 (507)
Q Consensus 148 ~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t-~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~ 226 (507)
..-++.||+.--. .+.+++|++.. .+.......... ..-..+++-.++.+|| .....+.|.+||+
T Consensus 175 s~dg~~lyv~d~~------~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~v-----a~~~~~~V~~~~~ 240 (306)
T 2p4o_A 175 KRFGNFLYVSNTE------KMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYG-----ATHIYNSVVRIAP 240 (306)
T ss_dssp EEETTEEEEEETT------TTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEE-----ECBTTCCEEEECT
T ss_pred CcCCCEEEEEeCC------CCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEE-----EeCCCCeEEEECC
Q ss_pred CCCcEEecccCCCCCCCCCccEEEEEC------CeEEEE
Q 010551 227 QTNEWSQPEIKGDLVTGRAGHAGITID------ENWYIV 259 (507)
Q Consensus 227 ~~~~W~~~~~~~~~p~~r~~~~~~~~~------~~l~v~ 259 (507)
. ++...+ ...+.+......+.++ +.|||.
T Consensus 241 ~-G~~~~~---~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 241 D-RSTTII---AQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp T-CCEEEE---ECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred C-CCEEEE---eecccccCCceEEEEecccCCCCEEEEE
No 475
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=53.57 E-value=69 Score=24.11 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=0.0
Q ss_pred hhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHH--------------------h
Q 010551 404 SLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE--------------------S 463 (507)
Q Consensus 404 ~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~--------------------~ 463 (507)
++...+.+..+.+.+++++..++.++...++.++.+-.--=.+++++|-..++...... +
T Consensus 5 s~~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~~~~e~~~~~~~~~~~~~~~~~~~~ 84 (106)
T 4e61_A 5 SLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQDLINEGVYKFNDETITGHGNGNGGA 84 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--------------CH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchh
Q ss_pred HHHHHHHHHHHH
Q 010551 464 SQTIENEVQILR 475 (507)
Q Consensus 464 ~~~le~e~~~~~ 475 (507)
...+-++++..+
T Consensus 85 ~~~~~~kIq~IL 96 (106)
T 4e61_A 85 LLRFVKKVESIL 96 (106)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
No 476
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=53.56 E-value=1.7e+02 Score=28.63 Aligned_cols=107 Identities=10% Similarity=0.053 Sum_probs=0.0
Q ss_pred cccchhhHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHh
Q 010551 384 EKDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 384 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
+..+..++..-..+.+--+....+.-.+..++.+.........++.+.|.+.++.-++...+...+...+++.+.+-|++
T Consensus 99 l~eLE~e~k~d~~~~khn~~I~~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~k 178 (526)
T 3iyk_A 99 LKELEDEQRNELVRLKYNDKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQK 178 (526)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q ss_pred HH-----HHHHHHHHHHHhHHHHHHHHHHhhc
Q 010551 464 SQ-----TIENEVQILRQQKSAFEQEMERATS 490 (507)
Q Consensus 464 ~~-----~le~e~~~~~~~~~~~~~~~~~~~~ 490 (507)
.. +-.+.+..+++..+.+.+..|-+++
T Consensus 179 E~~~Rt~dE~~mi~~yr~k~~aL~~aIe~Er~ 210 (526)
T 3iyk_A 179 EIGERTHAETVMVKEYRDKIDALKNAIEVERD 210 (526)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHh
No 477
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=53.35 E-value=41 Score=33.27 Aligned_cols=72 Identities=17% Similarity=0.044 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010551 410 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 410 ~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~ 481 (507)
.+...|-++-.++..+.++++.+...+..+.-+.++.-++.+..+++.++--.++..+++++.++..++..+
T Consensus 33 ~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~ 104 (485)
T 3qne_A 33 DEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSK 104 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 478
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=53.31 E-value=99 Score=30.08 Aligned_cols=99 Identities=8% Similarity=0.057 Sum_probs=0.0
Q ss_pred cchhhHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhh--hhHHHHHHHHHHHHh
Q 010551 386 DVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF--KLEAQIAELQKMLES 463 (507)
Q Consensus 386 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~--~~e~~~~e~~~~~~~ 463 (507)
.+...++.|+....+++..-....+-+..|+..+...+.+....+.-.++....+++...-+. -.-..-..++.....
T Consensus 92 ~V~~dl~~Le~~l~~isn~Ts~a~~~v~~ik~s~~~~q~~~~~n~~~~~~s~~mle~~~~~~~~~~~~~~~~~i~~l~~~ 171 (461)
T 3ghg_B 92 PIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSI 171 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccccCCCCcchhHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHH
Q ss_pred HHHHHHHHHHHHHhHHHHHHH
Q 010551 464 SQTIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 464 ~~~le~e~~~~~~~~~~~~~~ 484 (507)
++.+.++++.+.+.+.+++..
T Consensus 172 ~~~~~~~i~~l~~~~~~~~~~ 192 (461)
T 3ghg_B 172 LENLRSKIQKLESDVSAQMEY 192 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhh
No 479
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=52.87 E-value=1.6e+02 Score=28.09 Aligned_cols=240 Identities=14% Similarity=0.076 Sum_probs=0.0
Q ss_pred ccceEEEECC--EEEEEc----CCCCCccCCceEEEEccCC----ceeeeccccccCCCccccCCCcCCCCCccceeEEE
Q 010551 29 YKHAAAVFDQ--KLYIVG----GSRNGRFLSDVQVFDLRSL----AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK 98 (507)
Q Consensus 29 ~~~~~~~~~~--~iyi~G----G~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 98 (507)
..|++++..+ .||.|| |..+.....++..--+... ....+.. ...+..++.
T Consensus 77 ~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~-------------------G~~h~~alt 137 (406)
T 4d9s_A 77 ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC-------------------GDSHCLAVT 137 (406)
T ss_dssp SSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE-------------------CSSEEEEEE
T ss_pred cceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEE-------------------ChhheEEEc
Q ss_pred ECCEEEEEe-------ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECC-EEEEEc-------CCCCC
Q 010551 99 WGTKLLILG-------GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFG-------GEDRS 163 (507)
Q Consensus 99 ~~~~lyv~G-------G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~G-------G~~~~ 163 (507)
-++.||.|| |.........-..+-.+.......+. .-..|+++...+ .+|.+| |....
T Consensus 138 ~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va-------~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~ 210 (406)
T 4d9s_A 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVA-------AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR 210 (406)
T ss_dssp TTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEE-------ECSSEEEEEETTSCEEEEECCTTSTTCSSSS
T ss_pred CCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEe-------cCCCeEEEEeCCCCEEEeeCCCCCCCCCCCC
Q ss_pred CCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEc----CCCCCCCCCcEEEEE----CCCCcEEecc
Q 010551 164 RKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG----GCSHSIFFNDLHVLD----LQTNEWSQPE 235 (507)
Q Consensus 164 ~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G----G~~~~~~~~~i~~~d----~~~~~W~~~~ 235 (507)
.....-..+-.+.......+. .-..|++++..++.+|.+| |.-+.....+...-. +.......+
T Consensus 211 ~~~~~p~~v~~~~~~~i~~va-------~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i- 282 (406)
T 4d9s_A 211 TDRLVPERVTSTGGEKMSMVA-------CGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI- 282 (406)
T ss_dssp CCEEEEEECCCSTTCCEEEEE-------ECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEE-
T ss_pred CCcCccEEecccCCceEEEEE-------ECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEE-
Q ss_pred cCCCCCCCCCccEEEEE-CCeEEEEe----ccCCCCCcceEEEEECCCCcEEEeccCCCCCCCCCCCCceEEEEEcCceE
Q 010551 236 IKGDLVTGRAGHAGITI-DENWYIVG----GGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH 310 (507)
Q Consensus 236 ~~~~~p~~r~~~~~~~~-~~~l~v~G----G~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (507)
..-..|++++. ++.+|.+| |.-+.....+...- ..+..+..........-..+.+++..+..
T Consensus 283 ------~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p-------~~v~~~~~~~v~~va~G~~hs~alt~~G~ 349 (406)
T 4d9s_A 283 ------SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSP-------VQVRFPDDQKVVQVSCGWRHTLAVTERNN 349 (406)
T ss_dssp ------EECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEE-------EEECCGGGCCEEEEEECSSEEEEEETTSC
T ss_pred ------EecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccC-------EEEeccCCCcEEEEEeCCCeEEEEeCCCC
Q ss_pred EEEEc
Q 010551 311 LVAFG 315 (507)
Q Consensus 311 l~v~G 315 (507)
+|.+|
T Consensus 350 v~~wG 354 (406)
T 4d9s_A 350 VFAWG 354 (406)
T ss_dssp EEEEE
T ss_pred EEEec
No 480
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=52.78 E-value=1.2e+02 Score=29.33 Aligned_cols=143 Identities=16% Similarity=-0.015 Sum_probs=0.0
Q ss_pred CCEEEEEeccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECCEEEEEc----------CCCCCCCccCc
Q 010551 100 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGSRLIIFG----------GEDRSRKLLND 169 (507)
Q Consensus 100 ~~~lyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~iy~~G----------G~~~~~~~~n~ 169 (507)
++.+|+.-....... +.+.++|+.|++-...-+.|..| +.+...-+.++|+.- + .+.
T Consensus 84 ~~~vyV~n~~~~~~~--~~VsVID~~t~~vv~~I~vG~~P----gia~SpDgk~lyVan~~~~~~~~G~~-------~~~ 150 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI--TQQFVIDGSTGRILGMTDGGFLP----HPVAAEDGSFFAQASTVFERIARGKR-------TDY 150 (426)
T ss_dssp TTEEEEEECTTTCSS--EEEEEEETTTTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEE-------EEE
T ss_pred CCEEEEECCCcCCCC--CeEEEEECCCCEEEEEEECCCCC----ceEECCCCCEEEEEeccccccccCCC-------CCE
Q ss_pred EEEEECCCCcEEEeccCCCCCC----CCCCceEEEEcCCEEEEEcCCCCCCCCCcEEEEECCCCcEEecccCCCC----C
Q 010551 170 VHFLDLETMTWDAVEVTQTPPA----PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL----V 241 (507)
Q Consensus 170 ~~~~d~~t~~W~~~~~~~~~p~----~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~----p 241 (507)
+.++|+.+++-..--..+..+. ..-...+..-+++++||. .....+.+.++|+.+++-..--..+.+ |
T Consensus 151 VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~----n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p 226 (426)
T 3c75_H 151 VEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFY----QFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFP 226 (426)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEE----ECSSSCEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEE----ecCCCCeEEEEECCCCeEEEEEEcCCceeecc
Q ss_pred CCCCccEEEEECCeEEEE
Q 010551 242 TGRAGHAGITIDENWYIV 259 (507)
Q Consensus 242 ~~r~~~~~~~~~~~l~v~ 259 (507)
.....+....-+++++++
T Consensus 227 ~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 227 ASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp EETTEEEEEETTSSEEEE
T ss_pred CCCcEEEEEcCCCCEEEE
No 481
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=52.28 E-value=82 Score=30.74 Aligned_cols=75 Identities=12% Similarity=0.187 Sum_probs=0.0
Q ss_pred hhhHHHHHHhhccchhH--HHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010551 413 SRFREKIDEVNSTHSEL--SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 486 (507)
Q Consensus 413 ~~l~~~l~~~~~~~~e~--~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~----~le~e~~~~~~~~~~~~~~~~ 486 (507)
.+++++.++..+..+|+ .+.++..+.++++.+.++.+.+..++++++++...+ .+..+++....++.....+..
T Consensus 294 ~elkqrqeee~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~ 373 (551)
T 2b5u_A 294 DQVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIK 373 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHhhh
Q ss_pred H
Q 010551 487 R 487 (507)
Q Consensus 487 ~ 487 (507)
.
T Consensus 374 ~ 374 (551)
T 2b5u_A 374 Q 374 (551)
T ss_dssp H
T ss_pred h
No 482
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=52.18 E-value=39 Score=24.48 Aligned_cols=59 Identities=10% Similarity=0.186 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHH
Q 010551 389 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAE 456 (507)
Q Consensus 389 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e 456 (507)
.++..+..--+++ ....|+..++.+..-.+|.+.+-.+.+.+..+.++++.++.+++.+
T Consensus 12 ~niR~LRA~arel---------~le~Lee~leKl~~VveERree~~~~~~~~~er~~Kl~~~~e~l~~ 70 (86)
T 3nr7_A 12 NNIRTLRAQARES---------TLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIA 70 (86)
T ss_dssp TCHHHHHHHHHTS---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 483
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=52.14 E-value=89 Score=24.93 Aligned_cols=107 Identities=9% Similarity=0.111 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHh--------------------HHHHHhhHHHhhhhhhhhHHHH
Q 010551 395 KEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKE--------------------LSSVQGQLVAERSRCFKLEAQI 454 (507)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~e--------------------l~~~~~~~~~~~~~~~~~e~~~ 454 (507)
+.........+..........+.+|..+.....+...+ +..+...+...+..+...+..+
T Consensus 18 ~~~ed~a~~~l~~a~~~~~~~~~~L~~L~~~~~~y~~~~~~~~~~g~~~~~l~~~~~fi~~L~~~I~~q~~~l~~~~~~~ 97 (150)
T 3ajw_A 18 EKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNLNTDMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQWTQKV 97 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--CCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhHH---HHHHHHHHhhcccccCCCceee
Q 010551 455 AELQKMLESSQTIENEVQILRQQKS---AFEQEMERATSVQTQGSGGVWR 501 (507)
Q Consensus 455 ~e~~~~~~~~~~le~e~~~~~~~~~---~~~~~~~~~~~~~~q~~~g~~~ 501 (507)
...++.+.+.....+.++.+.++.. ..+....|+....+-.+.-+++
T Consensus 98 e~~r~~l~~a~~~~k~~e~L~er~~~~~~~~~~r~EQk~~DE~a~~~~~r 147 (150)
T 3ajw_A 98 DLALKSWREKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFAQRAAMR 147 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhc
No 484
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=51.90 E-value=33 Score=33.38 Aligned_cols=69 Identities=20% Similarity=0.247 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhH
Q 010551 390 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 464 (507)
Q Consensus 390 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~ 464 (507)
++..+.++++.+.....+.+.+.+.+.+++.. ...++.+++..+...+++++..++.++.++++++...
T Consensus 29 ~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 29 ALLALDREVQELKKRLQEVQTERNQVAKRVPK------APPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 485
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=51.86 E-value=55 Score=24.03 Aligned_cols=55 Identities=22% Similarity=0.301 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhh
Q 010551 392 DAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSR 446 (507)
Q Consensus 392 ~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~ 446 (507)
+.|-.+=-.++..+.....+..+|++.-...-..+.+++.+++..+.+++.+...
T Consensus 33 qELIqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e 87 (104)
T 3s9g_A 33 QELIKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTE 87 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHH
No 486
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=51.42 E-value=29 Score=19.04 Aligned_cols=29 Identities=17% Similarity=0.168 Sum_probs=0.0
Q ss_pred HhhhhhhhhHHHHHHHHHHHHhHHHHHHH
Q 010551 442 AERSRCFKLEAQIAELQKMLESSQTIENE 470 (507)
Q Consensus 442 ~~~~~~~~~e~~~~e~~~~~~~~~~le~e 470 (507)
.+++.+.+++.-+|++++++.++++-.+.
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~tvqa 31 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEETVQA 31 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 487
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=50.98 E-value=67 Score=23.19 Aligned_cols=81 Identities=12% Similarity=0.206 Sum_probs=0.0
Q ss_pred hhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhh-hhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHH
Q 010551 402 ELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF-KLEAQIAELQKMLESSQTIENEVQILRQQKSA 480 (507)
Q Consensus 402 ~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~-~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~ 480 (507)
+..+...+.+...|+..+.+.+...+-..++++..-.+++.+-.+.. +++.+++|.+.-+...-.|+.|+.-+++-++-
T Consensus 2 ~~eie~L~~q~~~Le~~l~e~E~~~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLLEG 81 (86)
T 1x8y_A 2 SCQLSQLQCQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEG 81 (86)
T ss_dssp ----------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcC
Q ss_pred HH
Q 010551 481 FE 482 (507)
Q Consensus 481 ~~ 482 (507)
.+
T Consensus 82 Ee 83 (86)
T 1x8y_A 82 EE 83 (86)
T ss_dssp HH
T ss_pred Cc
No 488
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=50.90 E-value=2.9e+02 Score=30.54 Aligned_cols=195 Identities=9% Similarity=0.053 Sum_probs=0.0
Q ss_pred cCcEEEEECCEEEEEcCCCCCCCccCcEEEEECCCCcEEEeccCC--CCCCCCCCceEEE-EcCCEEEEEcCCCCCCCCC
Q 010551 143 GGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ--TPPAPRYDHSAAL-HANRYLIVFGGCSHSIFFN 219 (507)
Q Consensus 143 ~~~~~~~~~~~iy~~GG~~~~~~~~n~~~~~d~~t~~W~~~~~~~--~~p~~r~~~~~~~-~~~~~l~v~GG~~~~~~~~ 219 (507)
.++++....+.+ ++|.-+.... ...++.|+.....|-.-.... .......++++++ ..++...++-|.-......
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w-~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~~~~G 412 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTW-SGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTG 412 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTT-TBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTGGGTC
T ss_pred ccccceecCCcc-eEcccccCCc-cceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcccccccc
Q ss_pred cEEEEECCCCcEEeccc-CCCCCCCCCccEEEEEC------CeEEEEeccCC--CCCcceEEEEECCCCc--EEEeccCC
Q 010551 220 DLHVLDLQTNEWSQPEI-KGDLVTGRAGHAGITID------ENWYIVGGGDN--NNGCQETIVLNMTKLA--WSILTSVK 288 (507)
Q Consensus 220 ~i~~~d~~~~~W~~~~~-~~~~p~~r~~~~~~~~~------~~l~v~GG~~~--~~~~~~~~~~d~~~~~--W~~v~~~~ 288 (507)
.+++|....+.|..... .+.......++++++.+ ..++++|.-.. ......+|+|...... |.....+.
T Consensus 413 ~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~ 492 (1095)
T 3k6s_A 413 KAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLY 492 (1095)
T ss_dssp EEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCC
T ss_pred eEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEee
Q ss_pred CCCCCCCCCCceEEEEE-----cCceEEEEEccCCCCcCceEEEEECCCC-CCCCCc
Q 010551 289 GRNPLASEGLSVCSAII-----EGEHHLVAFGGYNGKYNNEVFVMRLKPR-DIPRPK 339 (507)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-----~~~~~l~v~GG~~~~~~~~~~~~~~~~~-~w~~~~ 339 (507)
+....+..++..+.+.+ ++..-|+|-....+.....+|+|.-... .|....
T Consensus 493 g~~~~~~~~FG~sva~~gD~NgDG~~Dl~VGAP~~~~~~G~vyi~~g~~~~g~~~~~ 549 (1095)
T 3k6s_A 493 GEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSH 549 (1095)
T ss_dssp CCCSCSSCCBTSCEEEEECSSSSSCCEEEEECTTTTTSCCBEEEEEBCSSSCBCSSC
T ss_pred cccCCccccCccceEeecccCCCCCcCEEEeCCcCCCCCCEEEEecCCCCCCccccc
No 489
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=50.68 E-value=39 Score=20.45 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=0.0
Q ss_pred chhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHH
Q 010551 426 HSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE 462 (507)
Q Consensus 426 ~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~ 462 (507)
+.+++....+.+..+.++++++.-|+.+-+-+++.++
T Consensus 5 l~eLE~r~k~le~~naeLEervstLq~EN~mLRqvl~ 41 (42)
T 2oqq_A 5 LSELENRVKDLENKNSELEERLSTLQNENQMLRHILK 41 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
No 490
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=50.66 E-value=1.7e+02 Score=27.71 Aligned_cols=150 Identities=16% Similarity=0.102 Sum_probs=0.0
Q ss_pred ccceEEEE-CCEEEEEc----CCCCCccCCceEEEEccCC----ceeeeccccccCCCccccCCCcCCCCCccceeEEEE
Q 010551 29 YKHAAAVF-DQKLYIVG----GSRNGRFLSDVQVFDLRSL----AWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW 99 (507)
Q Consensus 29 ~~~~~~~~-~~~iyi~G----G~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~ 99 (507)
..|++++. ++.||.|| |..+.........-..... ....+.. -..|+++..
T Consensus 116 ~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--------------------G~~hs~alt 175 (389)
T 3kci_A 116 GKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--------------------GGAHSACVT 175 (389)
T ss_dssp CSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--------------------CSSEEEEEE
T ss_pred CCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--------------------CcCeEEEEe
Q ss_pred -CCEEEEEe-------ccCCCCCCcceEEEEECCCCcEEEeecCCCCCCCCcCcEEEEECC-EEEEEc-------CCCCC
Q 010551 100 -GTKLLILG-------GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVTRGGHSVTLVGS-RLIIFG-------GEDRS 163 (507)
Q Consensus 100 -~~~lyv~G-------G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~-~iy~~G-------G~~~~ 163 (507)
++.||.|| |.........-..+-.+....-..+. .-....|+++...+ .+|.+| |....
T Consensus 176 ~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia-----~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~ 250 (389)
T 3kci_A 176 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA-----CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 250 (389)
T ss_dssp TTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE-----ECCSSCEEEEEETTTEEEEEECCGGGTTSSSSC
T ss_pred CCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEE-----EcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCC
Q ss_pred CCccCcEEEEECCCCcEEEeccCCCCCCCCCCceEEEEcCCEEEEEc
Q 010551 164 RKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 210 (507)
Q Consensus 164 ~~~~n~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 210 (507)
.....-..+-.+.......+. .-..|++++-.++.+|.+|
T Consensus 251 ~~~~~p~~v~~~~~~~v~~v~-------~G~~hs~alt~~G~v~~wG 290 (389)
T 3kci_A 251 DGCKVPMKIDSLTGLGVVKVE-------CGSQFSVALTKSGAVYTWG 290 (389)
T ss_dssp CCEEEEEECGGGTTSCEEEEE-------EETTEEEEEETTSCEEEEE
T ss_pred CCccccEEecccCCCcEEEEe-------CCCCEEEEEeCCCeEEEEe
No 491
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=50.54 E-value=43 Score=27.17 Aligned_cols=47 Identities=15% Similarity=0.016 Sum_probs=0.0
Q ss_pred hhHHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHH
Q 010551 438 GQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQE 484 (507)
Q Consensus 438 ~~~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~~~~ 484 (507)
++.+.+++.-.+++..++.++++||++...+...+-|-++-++.+++
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafknLv~RN~~~e~~ 51 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQ 51 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 492
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=50.50 E-value=12 Score=34.76 Aligned_cols=50 Identities=12% Similarity=0.201 Sum_probs=0.0
Q ss_pred hhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHh
Q 010551 414 RFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 414 ~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
++-.+|..++..+...+.+++.++..++.+++++++|++++.+++.+.+.
T Consensus 1 ~~~~~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~~l~~~~~~ 50 (319)
T 1fzc_C 1 KMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQE 50 (319)
T ss_dssp ---------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 493
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=50.42 E-value=67 Score=23.45 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHH------hhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhh
Q 010551 388 RTDIDAIKEDKRVL------ELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKL 450 (507)
Q Consensus 388 ~~~~~~l~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~ 450 (507)
..++..++..++-+ ......--.+...|+.+...+..+.+.+.+|+..+..+....+.+.+.|
T Consensus 20 ~eev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 20 KDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 494
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=50.34 E-value=31 Score=25.31 Aligned_cols=47 Identities=11% Similarity=0.192 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010551 445 SRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEMERATSV 491 (507)
Q Consensus 445 ~~~~~~e~~~~e~~~~~~~~~---------~le~e~~~~~~~~~~~~~~~~~~~~~ 491 (507)
++..+++.++.++++++...- +|.+++..+..+++.+.+++...+..
T Consensus 23 ~~~~~lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~ 78 (93)
T 3sjb_C 23 KKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKA 78 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 495
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=50.15 E-value=12 Score=25.21 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHh
Q 010551 420 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 420 ~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~ 463 (507)
+.....+.+++.+......++..++.++..|+.++..+++.+..
T Consensus 18 ~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l~~ 61 (62)
T 1jnm_A 18 KRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMN 61 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 496
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=49.81 E-value=81 Score=24.53 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=0.0
Q ss_pred HHhhhhhhhhHHHHHHHHHHHHhHH------------HHHHHHHHHHHhHHHHHHHHHHhhcccccCCCceeee
Q 010551 441 VAERSRCFKLEAQIAELQKMLESSQ------------TIENEVQILRQQKSAFEQEMERATSVQTQGSGGVWRW 502 (507)
Q Consensus 441 ~~~~~~~~~~e~~~~e~~~~~~~~~------------~le~e~~~~~~~~~~~~~~~~~~~~~~~q~~~g~~~~ 502 (507)
.++..+..+|+.++++++++|+.++ +|+.-+..-..-=+....++-..-...--.-||.|.|
T Consensus 3 ~~L~~~~~~L~~~i~~l~~~L~~lkqa~k~~~~~~~~eL~~LI~KWr~asq~aaeeLf~~~~~rv~rMGG~~~~ 76 (122)
T 3viq_A 3 MQLLSRRLKLEKEVRNLQEQLITAETARKVEAKNEDKDLQTLIQKWKNAAQQAAEVLFKPMAERIRLAGGVTQS 76 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhh
No 497
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=49.73 E-value=83 Score=27.48 Aligned_cols=76 Identities=14% Similarity=0.196 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhhhhhhhhHHHHHHHHHHHHhHHH
Q 010551 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQT 466 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~~~ 466 (507)
...|+..+..+...+.-..-++.-...+|.+....++.+..--+.+.+.+..+++.+..||..+...+.++.-+++
T Consensus 151 l~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief~qE 226 (242)
T 3uux_B 151 PSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLEE 226 (242)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
No 498
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=49.70 E-value=1.5e+02 Score=26.81 Aligned_cols=95 Identities=7% Similarity=0.028 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhh-------hhhhhhHHHHHHHHHHHHh
Q 010551 391 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAER-------SRCFKLEAQIAELQKMLES 463 (507)
Q Consensus 391 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~-------~~~~~~e~~~~e~~~~~~~ 463 (507)
....+..++.++....+...+.......++..+.......++++..+...+..+ ..+++++..+++..++...
T Consensus 104 ~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~~~~~~~~~~ 183 (301)
T 2efk_A 104 SQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSHMAEE 183 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHHHHHHHHHHHHHHHHHH
Q ss_pred HH----------------HHHHHHHHHHHhHHHHHHHH
Q 010551 464 SQ----------------TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 464 ~~----------------~le~e~~~~~~~~~~~~~~~ 485 (507)
.. ..+.++..+.+.++.++++.
T Consensus 184 a~~~Y~~~v~~~n~~~~~~~~~~~p~~~~~lQ~lee~r 221 (301)
T 2efk_A 184 SKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDERR 221 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 499
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=49.37 E-value=1.2e+02 Score=28.42 Aligned_cols=90 Identities=11% Similarity=0.166 Sum_probs=0.0
Q ss_pred HHHHHHhhhhHHHHhhhhhhHHHHHHhhccchhHHHhHHHHHhhHHHhh-------hhhhhhHHHHHHHHHHHHhHH---
Q 010551 396 EDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAER-------SRCFKLEAQIAELQKMLESSQ--- 465 (507)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~e~~~el~~~~~~~~~~~-------~~~~~~e~~~~e~~~~~~~~~--- 465 (507)
.+++.++..+.....+...+...++..+.......++.+..+.+.+..+ +.+++++..+++..++.....
T Consensus 136 ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y 215 (350)
T 3aco_A 136 KETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKY 215 (350)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred ------------HHHHHHHHHHHhHHHHHHHH
Q 010551 466 ------------TIENEVQILRQQKSAFEQEM 485 (507)
Q Consensus 466 ------------~le~e~~~~~~~~~~~~~~~ 485 (507)
..+.++..+....+.++++.
T Consensus 216 ~~~v~~~n~~~~~~~~~~~~~~~~~Q~lee~R 247 (350)
T 3aco_A 216 EKSLKELDQGTPQYMENMEQVFEQCQQFEEKR 247 (350)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 500
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=48.99 E-value=43 Score=23.88 Aligned_cols=42 Identities=12% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010551 440 LVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 481 (507)
Q Consensus 440 ~~~~~~~~~~~e~~~~e~~~~~~~~~~le~e~~~~~~~~~~~ 481 (507)
...+++....++...++.++...+.+.|.++.++++++++++
T Consensus 39 ~~iL~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 39 LSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Done!