Query 010552
Match_columns 507
No_of_seqs 235 out of 1375
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 09:16:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010552.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010552hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3E-103 1E-107 824.2 49.6 455 4-466 18-483 (490)
2 3sza_A Aldehyde dehydrogenase, 100.0 2E-100 7E-105 800.9 48.6 451 28-484 15-468 (469)
3 3ros_A NAD-dependent aldehyde 100.0 5E-100 2E-104 800.4 48.7 459 9-477 5-469 (484)
4 3iwj_A Putative aminoaldehyde 100.0 1.2E-99 4E-104 802.5 50.3 456 6-466 21-489 (503)
5 3rh9_A Succinate-semialdehyde 100.0 1.5E-99 5E-104 800.0 47.7 452 6-466 25-484 (506)
6 3ifg_A Succinate-semialdehyde 100.0 1.8E-99 6E-104 796.9 46.9 451 6-464 26-482 (484)
7 3ed6_A Betaine aldehyde dehydr 100.0 4.8E-99 2E-103 798.8 49.6 453 6-466 46-510 (520)
8 4f3x_A Putative aldehyde dehyd 100.0 2.6E-99 9E-104 797.5 46.9 450 9-465 41-496 (498)
9 3ek1_A Aldehyde dehydrogenase; 100.0 3.1E-99 1E-103 797.4 45.4 452 6-466 46-502 (504)
10 2o2p_A Formyltetrahydrofolate 100.0 9.3E-99 3E-103 796.0 47.2 454 7-465 51-516 (517)
11 3prl_A NADP-dependent glyceral 100.0 1.3E-98 4E-103 793.5 47.7 451 7-466 26-483 (505)
12 1wnd_A Putative betaine aldehy 100.0 1.9E-98 6E-103 790.5 48.5 451 8-465 38-494 (495)
13 3qan_A 1-pyrroline-5-carboxyla 100.0 1.9E-98 6E-103 797.3 48.7 454 7-466 50-516 (538)
14 3lns_A Benzaldehyde dehydrogen 100.0 3.4E-98 1E-102 783.8 48.9 449 9-465 7-456 (457)
15 3r31_A BADH, betaine aldehyde 100.0 4.9E-99 2E-103 798.1 42.9 451 6-467 28-489 (517)
16 3i44_A Aldehyde dehydrogenase; 100.0 4.3E-98 1E-102 788.1 49.9 446 7-463 40-495 (497)
17 3k2w_A Betaine-aldehyde dehydr 100.0 1.2E-98 4E-103 793.8 45.4 452 7-466 27-488 (497)
18 3u4j_A NAD-dependent aldehyde 100.0 3.4E-98 1E-102 793.6 48.9 452 7-466 37-498 (528)
19 1a4s_A ALDH, betaine aldehyde 100.0 3.2E-98 1E-102 790.9 48.4 451 7-466 34-496 (503)
20 1bxs_A Aldehyde dehydrogenase; 100.0 3.7E-98 1E-102 789.3 47.9 452 7-466 35-496 (501)
21 4e4g_A Methylmalonate-semialde 100.0 4.7E-98 2E-102 791.4 47.1 453 7-466 41-505 (521)
22 1o04_A Aldehyde dehydrogenase, 100.0 2.2E-98 7E-103 791.0 44.1 452 7-466 34-495 (500)
23 2imp_A Lactaldehyde dehydrogen 100.0 8.5E-98 3E-102 785.2 48.0 452 6-465 20-478 (479)
24 3jz4_A Succinate-semialdehyde 100.0 1.8E-97 6E-102 783.0 49.4 452 6-465 23-480 (481)
25 3pqa_A Lactaldehyde dehydrogen 100.0 9.3E-98 3E-102 783.5 47.0 442 10-466 14-464 (486)
26 3b4w_A Aldehyde dehydrogenase; 100.0 4.1E-98 1E-102 788.6 44.1 451 7-466 23-482 (495)
27 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.7E-97 6E-102 787.6 48.6 451 7-466 41-505 (515)
28 4h7n_A Aldehyde dehydrogenase; 100.0 1.4E-97 5E-102 782.5 46.3 463 6-475 4-472 (474)
29 3etf_A Putative succinate-semi 100.0 4.3E-97 1E-101 777.5 48.4 451 7-466 6-461 (462)
30 1uzb_A 1-pyrroline-5-carboxyla 100.0 1E-96 3E-101 782.5 50.3 453 8-465 51-515 (516)
31 3r64_A NAD dependent benzaldeh 100.0 7.3E-97 3E-101 782.2 48.7 453 6-467 26-486 (508)
32 2w8n_A Succinate-semialdehyde 100.0 3.8E-97 1E-101 780.5 44.5 450 8-465 26-485 (487)
33 2ve5_A BADH, betaine aldehyde 100.0 1.5E-96 5E-101 778.4 48.7 453 6-466 20-483 (490)
34 2j6l_A Aldehyde dehydrogenase 100.0 1.3E-96 4E-101 778.8 47.6 452 7-465 36-498 (500)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 5.5E-97 2E-101 781.2 44.4 458 8-475 32-500 (501)
36 4dng_A Uncharacterized aldehyd 100.0 2.9E-96 1E-100 775.3 46.1 453 6-466 20-478 (485)
37 1euh_A NADP dependent non phos 100.0 3E-96 1E-100 772.7 45.5 445 9-465 19-473 (475)
38 3ty7_A Putative aldehyde dehyd 100.0 3.8E-96 1E-100 773.0 42.4 446 6-464 21-475 (478)
39 1t90_A MMSDH, probable methylm 100.0 9.3E-96 3E-100 770.4 45.0 453 6-466 19-480 (486)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 3.9E-94 1.3E-98 765.6 45.1 461 9-476 78-560 (563)
41 3ju8_A Succinylglutamic semial 100.0 2.4E-92 8.3E-97 745.1 47.2 444 8-466 20-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 1.8E-91 6.3E-96 783.2 47.0 454 7-466 544-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 4.8E-91 1.6E-95 742.6 40.7 452 8-466 22-519 (534)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 1.5E-88 5E-93 719.6 43.1 446 3-463 2-480 (510)
45 3v4c_A Aldehyde dehydrogenase 100.0 1.9E-88 6.6E-93 721.6 41.3 440 12-463 44-515 (528)
46 3haz_A Proline dehydrogenase; 100.0 1.9E-87 6.6E-92 749.2 46.4 434 26-466 545-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 1.7E-82 5.7E-87 663.8 25.1 416 11-482 10-446 (463)
48 1vlu_A Gamma-glutamyl phosphat 100.0 5.5E-81 1.9E-85 653.3 23.3 405 32-480 15-449 (468)
49 3k9d_A LMO1179 protein, aldehy 100.0 1.8E-79 6E-84 643.4 29.6 412 26-465 7-448 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 9.2E-77 3.1E-81 619.0 31.1 389 30-466 25-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.4E-76 4.9E-81 614.5 26.2 388 29-466 12-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 1E-75 3.5E-80 612.8 29.0 405 26-466 2-449 (452)
53 4gic_A HDH, histidinol dehydro 97.4 0.14 5E-06 51.0 29.3 334 45-463 25-400 (423)
54 1kae_A HDH, histidinol dehydro 96.9 0.45 1.5E-05 47.6 30.7 328 53-463 30-393 (434)
55 2fiu_A Conserved hypothetical 64.4 15 0.00053 28.6 6.2 59 317-394 16-76 (99)
56 3v42_A Folliculin; tumor suppr 58.8 12 0.00041 34.1 5.2 64 151-219 21-84 (226)
57 3lo3_A Uncharacterized conserv 51.9 31 0.0011 26.5 6.0 59 317-394 15-75 (94)
58 1s7i_A Hypothetical protein PA 46.8 54 0.0018 26.6 6.9 70 321-395 32-108 (124)
59 3fgh_A Transcription factor A, 31.6 1.1E+02 0.0037 21.4 5.7 36 39-74 29-64 (67)
60 1use_A VAsp, vasodilator-stimu 31.3 41 0.0014 22.0 2.9 28 55-82 13-40 (45)
61 3hhl_A RPA0582; alpha-beta-bar 30.1 87 0.003 26.1 5.7 64 315-394 45-110 (143)
62 1b93_A Protein (methylglyoxal 27.3 70 0.0024 27.1 4.6 114 135-271 12-135 (152)
63 2ioj_A Hypothetical protein AF 25.0 49 0.0017 27.2 3.3 46 190-235 53-100 (139)
64 2eqz_A High mobility group pro 24.8 1.4E+02 0.0049 22.0 5.6 36 39-74 48-83 (86)
65 2co9_A Thymus high mobility gr 24.7 2.1E+02 0.0073 21.9 6.8 42 40-81 49-90 (102)
66 2yvq_A Carbamoyl-phosphate syn 23.3 70 0.0024 26.6 3.9 60 181-240 61-132 (143)
67 1xxa_A ARGR, arginine represso 21.9 1E+02 0.0036 22.6 4.1 36 160-198 14-50 (78)
68 2xw6_A MGS, methylglyoxal synt 20.5 33 0.0011 28.4 1.2 78 156-240 26-112 (134)
69 1v63_A Nucleolar transcription 20.3 2E+02 0.0069 22.1 5.8 41 39-79 37-77 (101)
70 2zfz_A Arginine repressor; DNA 20.1 1.6E+02 0.0056 21.5 4.9 36 160-198 20-55 (79)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.1e-103 Score=824.23 Aligned_cols=455 Identities=24% Similarity=0.343 Sum_probs=424.5
Q ss_pred ccccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010552 4 PSVRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK 83 (507)
Q Consensus 4 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 83 (507)
+....++++.+|.||++|+.+ |.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||
T Consensus 18 ~~~~~~~~v~nP~tg~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 96 (490)
T 2wme_A 18 ASSGATFETINPANGEVLAKV-QRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGK 96 (490)
T ss_dssp CSSSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCEEEeeCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345667889999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 84 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 84 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
|+.+++..|+..+++.+++++...+++.. ...+ ...+...+++++|+|||++|+|||||+.++++++++||++||+
T Consensus 97 ~~~ea~~~~v~~~~~~~~~~a~~~~~~~~-~~~~---~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNt 172 (490)
T 2wme_A 97 PLAETRSVDIVTGADVLEYYAGLVPAIEG-EQIP---LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNA 172 (490)
T ss_dssp CHHHHTTTHHHHHHHHHHHHHHHGGGCCE-EEEE---EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccccccC-cccc---ccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCe
Confidence 99999876799999999999887765432 1111 1234567889999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHH-HHhcccCceeee
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMA-AAAKHLTPVILE 239 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~-~a~~~~~~~~le 239 (507)
||+|||+.+|+++.++++++.++ +|+|++|+|+| +.++++.|+.|+ ||+|+||||+.+|+.|++ .+++++||++||
T Consensus 173 VVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lE 252 (490)
T 2wme_A 173 MIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTME 252 (490)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEE
Confidence 99999999999999999999999 99999999999 678999999997 999999999999998876 556789999999
Q ss_pred cCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 010552 240 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNP 318 (507)
Q Consensus 240 lgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~ 318 (507)
||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++
T Consensus 253 LGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~ 331 (490)
T 2wme_A 253 LGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSF 331 (490)
T ss_dssp CCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCH
T ss_pred cCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCH
Confidence 999999999999999999999999999 99999999999999999999999999999999999999987 7899999999
Q ss_pred HHHHHHHHHHHHHhc-CCeEEecCccC-----CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC
Q 010552 319 FHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 392 (507)
Q Consensus 319 ~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 392 (507)
.+++++.++|+++.+ |+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 332 ~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 411 (490)
T 2wme_A 332 PHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDT 411 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcC
Confidence 999999999999964 78999999753 268999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 393 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 393 ~~glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
+|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 412 ~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 412 EYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp SCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 99999999999999999999999999999998653 5678999999999999999999999999999999875
No 2
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=2.2e-100 Score=800.88 Aligned_cols=451 Identities=44% Similarity=0.786 Sum_probs=415.4
Q ss_pred CCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 010552 28 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 107 (507)
Q Consensus 28 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~ 107 (507)
.+.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.+
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999999999999999999999987669999999999999998
Q ss_pred hhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHHHHHHHHhhhc
Q 010552 108 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 187 (507)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~ll~~al 187 (507)
++|..+..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al 174 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhC
Confidence 88876543322222334568899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCChHhHHHHHhcCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHhhh
Q 010552 188 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 267 (507)
Q Consensus 188 p~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~ 267 (507)
|+|++|+|+|+.+.+..|+.|++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|
T Consensus 175 P~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~- 253 (469)
T 3sza_A 175 DKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF- 253 (469)
T ss_dssp CTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-
T ss_pred CcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-
Confidence 9999999999877788898889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHhcCCeEEecCccCCC
Q 010552 268 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK 346 (507)
Q Consensus 268 ~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~ 346 (507)
.|+||.|++++|||||++++|+|+++|+++++++. |+|.+ ++++||++++.+++++.+++ +|+++++||..+.+
T Consensus 254 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~ 328 (469)
T 3sza_A 254 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAA 328 (469)
T ss_dssp GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETT
T ss_pred hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCC
Confidence 99999999999999999999999999999999985 66544 78999999999999999998 57899999987667
Q ss_pred CceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeeEEECCCc
Q 010552 347 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI 426 (507)
Q Consensus 347 g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~ 426 (507)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus 329 g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~ 408 (469)
T 3sza_A 329 TRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVI 408 (469)
T ss_dssp TTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSS
T ss_pred CceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCCCC--CCCcCCCCcHHHHH
Q 010552 427 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGD--STTRYPPYTAEKQK 484 (507)
Q Consensus 427 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 484 (507)
.+...+.+||||+|.||+|+++|.+|+++||+.|+|+++++..+ .+++||||+..|.+
T Consensus 409 ~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 409 VHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp GGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 65567899999999999999999999999999999999876433 57899999986654
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.9e-100 Score=800.42 Aligned_cols=459 Identities=22% Similarity=0.319 Sum_probs=425.4
Q ss_pred cceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 010552 9 FQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 88 (507)
Q Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 88 (507)
.+++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++
T Consensus 5 ~~~~~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 83 (484)
T 3ros_A 5 KYQSVNPYTNEAFASY-DNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES 83 (484)
T ss_dssp CCEEEETTTTEEEEEC-CCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred ccceeCCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 3788999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcC
Q 010552 89 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 168 (507)
Q Consensus 89 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKp 168 (507)
+ .|+..+++.++++++.++++.+..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 84 ~-~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 158 (484)
T 3ros_A 84 K-EEVELCVSICNYYADHGPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKH 158 (484)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEEC
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 499999999999999998887653221 13567899999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCc
Q 010552 169 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 245 (507)
Q Consensus 169 s~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p 245 (507)
|+.+|+++.++++++.++ +|+|++|+|+|+. +.++ |+.|+ +|+|+||||+++|+.|++.+++++||+++|||||||
T Consensus 159 s~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p 237 (484)
T 3ros_A 159 AHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDA 237 (484)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCE
T ss_pred CCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCc
Confidence 999999999999999999 9999999999954 4566 99996 999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHH
Q 010552 246 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARL 324 (507)
Q Consensus 246 ~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~~ 324 (507)
+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++
T Consensus 238 ~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv 316 (484)
T 3ros_A 238 FIVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKL 316 (484)
T ss_dssp EEECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred ceeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHH
Confidence 999999999999999999999 99999999999999999999999999999999999999987 7899999999999999
Q ss_pred HHHHHHHhc-CCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEec
Q 010552 325 ASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 402 (507)
Q Consensus 325 ~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t 402 (507)
.++++++.+ |+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 317 ~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 396 (484)
T 3ros_A 317 EAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIG 396 (484)
T ss_dssp HHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEEC
T ss_pred HHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEEC
Confidence 999999864 7899999975 35799999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCCCCCCCcCCC
Q 010552 403 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPP 477 (507)
Q Consensus 403 ~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p 477 (507)
+|.++++++++++++|+|+||++. ...+.+||||+|.||+|+++|++|+++||+.|+|+++........-|+.
T Consensus 397 ~d~~~a~~~~~~l~aG~V~vN~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~~~ 469 (484)
T 3ros_A 397 SDIDRAKKVSAQIETGMTVINGRW--ITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQAENLYFQ 469 (484)
T ss_dssp SCHHHHHHHHHHSCSSCCEETSCC--CCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGGGC--------
T ss_pred CCHHHHHHHHHhCccceEEECCCC--CCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCCCChhhhheec
Confidence 999999999999999999999965 3578899999999999999999999999999999987543233334443
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.2e-99 Score=802.51 Aligned_cols=456 Identities=27% Similarity=0.385 Sum_probs=427.0
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhH-----hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-----SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKD 80 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e 80 (507)
...++++.+|.||++++.+ +.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|+++++.|
T Consensus 21 ~~~~~~~~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e 99 (503)
T 3iwj_A 21 LNKRIPVINPATQNIIGDI-PAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESID 99 (503)
T ss_dssp TCCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCeEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999 99999999999999999999 99999999999999999999999999999999999
Q ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHh
Q 010552 81 LSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAA 160 (507)
Q Consensus 81 ~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaa 160 (507)
+|||..++.. |+..+++.+++++...+++......+......+...+++++|+|||++|+|||||+.+.++++++||++
T Consensus 100 ~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaa 178 (503)
T 3iwj_A 100 CGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAA 178 (503)
T ss_dssp HCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHT
T ss_pred hCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhc
Confidence 9999999975 999999999999998887654332111111234567899999999999999999999999999999999
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCcee
Q 010552 161 GNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVI 237 (507)
Q Consensus 161 GN~vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~ 237 (507)
||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||++
T Consensus 179 GN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~ 258 (503)
T 3iwj_A 179 GCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVS 258 (503)
T ss_dssp TCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEE
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEE
Confidence 99999999999999999999999999 99999999999 567899999996 9999999999999999999999999999
Q ss_pred eecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccC
Q 010552 238 LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIV 316 (507)
Q Consensus 238 lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~ 316 (507)
+|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++
T Consensus 259 lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 337 (503)
T 3iwj_A 259 LELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVV 337 (503)
T ss_dssp EECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCS
T ss_pred EECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcc
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999987 77899999
Q ss_pred CHHHHHHHHHHHHHHhc-CCeEEecCccC---CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC
Q 010552 317 NPFHFARLASLLDEDKV-SDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 392 (507)
Q Consensus 317 ~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 392 (507)
++.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 338 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 417 (503)
T 3iwj_A 338 SEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDT 417 (503)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999864 78999999754 479999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 393 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 393 ~~glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
+|||++||||+|.++++++++++++|+|+||++. ...+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 418 ~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 418 VYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQ--PCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp SCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSC--CCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 9999999999999999999999999999999875 35688999999999999999999999999999999875
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.5e-99 Score=800.05 Aligned_cols=452 Identities=23% Similarity=0.333 Sum_probs=425.8
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||.
T Consensus 25 ~~~~~~v~~P~tg~~i~~v-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 103 (506)
T 3rh9_A 25 GGATFDVYNPATGSVIAKV-PSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPW 103 (506)
T ss_dssp TTCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCEEEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 3567889999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEe-eccEEEEEEecCccchhhhhhHHHHHHHhCCeE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS-EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 164 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~v 164 (507)
.++. .|+..+++.+++++..++++.... .+. ..+...++++ +|+|||++|+|||||+.++++++++||++||+|
T Consensus 104 ~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~V 178 (506)
T 3rh9_A 104 KEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPE---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPS 178 (506)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSC---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEE
Confidence 9998 599999999999999988875432 111 1345678888 999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecC
Q 010552 165 VLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG 241 (507)
Q Consensus 165 VlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg 241 (507)
|+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|||
T Consensus 179 VlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElG 258 (506)
T 3rh9_A 179 VIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELG 258 (506)
T ss_dssp EEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECC
T ss_pred EEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecC
Confidence 9999999999999999999999 99999999999 568899999997 99999999999999999999999999999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHH
Q 010552 242 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFH 320 (507)
Q Consensus 242 G~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~ 320 (507)
||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+
T Consensus 259 Gk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~ 337 (506)
T 3rh9_A 259 GNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQG 337 (506)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHH
Confidence 9999999999999999999999999 99999999999999999999999999999999999999987 779999999999
Q ss_pred HHHHHHHHHHHhc-CCeEEecCcc-CC-CCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCce
Q 010552 321 FARLASLLDEDKV-SDKIVYGGQR-DE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 397 (507)
Q Consensus 321 ~~~~~~~i~~a~~-~~~v~~gg~~-~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gls 397 (507)
++++.++++++.+ |+++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 338 ~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLa 417 (506)
T 3rh9_A 338 FDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLA 417 (506)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSE
T ss_pred HHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCce
Confidence 9999999999965 7899999975 33 7999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 398 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 398 a~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
+||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 418 a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 418 SYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp EEEECSCHHHHHHHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999999875 4578999999999999999999999999999998765
No 6
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.8e-99 Score=796.85 Aligned_cols=451 Identities=24% Similarity=0.345 Sum_probs=422.3
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||.
T Consensus 26 ~~~~~~v~~P~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 104 (484)
T 3ifg_A 26 SDATFEVFDPATGESLGTV-PKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPL 104 (484)
T ss_dssp TCCEEEEECTTTCCEEEEE-ECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCEEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 3567888999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.+++. |+..+++.+++++...++.... .. +....+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 105 ~~a~~-ev~~~~~~l~~~a~~~~~~~g~-~~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VV 180 (484)
T 3ifg_A 105 AEAKG-EIAYAASFIEWFAEEGKRVAGD-TL--PTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIV 180 (484)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHTTCCEE-EE--CCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhcCc-cc--cccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEE
Confidence 99975 9999999999998877653221 11 11113456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+|||+.+|+++..+++++.++ +|+|+||+|+| +.++++.|++|+ +|+|+||||+++|+.|++.+++++||+++||||
T Consensus 181 lKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGG 260 (484)
T 3ifg_A 181 VKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGG 260 (484)
T ss_dssp EECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCC
T ss_pred EECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCC
Confidence 999999999999999999999 99999999999 567899999996 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.++
T Consensus 261 k~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 339 (484)
T 3ifg_A 261 NAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAV 339 (484)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999987 7789999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCccC-CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 399 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~ 399 (507)
+++.++++++.+ |+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 340 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~ 419 (484)
T 3ifg_A 340 KKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAY 419 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEE
T ss_pred HHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEE
Confidence 999999999865 78999999763 3799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 010552 400 FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 464 (507)
Q Consensus 400 i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~ 464 (507)
|||+|.++++++++++++|+|+||+.. ...+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 420 v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 420 LYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp EECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 999999999999999999999999864 356889999999999999999999999999999975
No 7
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=4.8e-99 Score=798.75 Aligned_cols=453 Identities=22% Similarity=0.362 Sum_probs=426.0
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHh--HhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK 83 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 83 (507)
...++++.+|.||++|+.+ +.++.+|+++|+++|++|| +.|+.++.++|.++|++++++|++++++|+++++.|+||
T Consensus 46 ~~~~~~v~nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 124 (520)
T 3ed6_A 46 NKNTRDIINPYNQEVIFTV-SEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGK 124 (520)
T ss_dssp TCCEEEEEETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCEEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 4567889999999999999 8999999999999999999 899999999999999999999999999999999999999
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 84 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 84 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
|..++.. |+..+++.+++++...+++... ..+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 125 ~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNt 200 (520)
T 3ed6_A 125 TLEESYA-DMDDIHNVFMYFAGLADKDGGE-MID--SPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCS 200 (520)
T ss_dssp CHHHHHH-HHHHHHHHHHHHHHHTTSCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCE
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHhcCe-ecc--cCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCE
Confidence 9999985 9999999999999887765431 111 11134567899999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeec
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 240 (507)
||+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ +|+|+||||+++|+.|++.+++++||+++||
T Consensus 201 VVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lEL 280 (520)
T 3ed6_A 201 LVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALEL 280 (520)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred EEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEc
Confidence 99999999999999999999999 99999999999 678999999996 9999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHH
Q 010552 241 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF 319 (507)
Q Consensus 241 gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~ 319 (507)
|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||++++.
T Consensus 281 GGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~ 359 (520)
T 3ed6_A 281 GGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTE 359 (520)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHH
T ss_pred CCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999987 77899999999
Q ss_pred HHHHHHHHHHHHhc-CCeEEecCccC-----CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC
Q 010552 320 HFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 393 (507)
Q Consensus 320 ~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 393 (507)
+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 360 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~ 439 (520)
T 3ed6_A 360 HRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSI 439 (520)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCC
Confidence 99999999999865 77999999763 4699999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 394 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 394 ~glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|||+++|||+|.++++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 440 ~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 440 YGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp CCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred CCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999998753 578999999999999999999999999999998875
No 8
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.6e-99 Score=797.52 Aligned_cols=450 Identities=21% Similarity=0.332 Sum_probs=423.4
Q ss_pred cceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 010552 9 FQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 88 (507)
Q Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 88 (507)
++++.+|.||++++.+ +.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+|||..++
T Consensus 41 ~~~v~nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 119 (498)
T 4f3x_A 41 EEHILNPRTGAGIIDL-AEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAV 119 (498)
T ss_dssp EEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred eEEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 6789999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcC
Q 010552 89 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 168 (507)
Q Consensus 89 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKp 168 (507)
...|+..+++.++++++.++++.... .+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 120 ~~~ev~~~~~~l~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKP 196 (498)
T 4f3x_A 120 KNDELPAIIDCWRFFAGAVRNLHAPA-AG--EYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKP 196 (498)
T ss_dssp HHTHHHHHHHHHHHHHHHTTCCEEEC-BE--EEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcc-cc--CCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEEC
Confidence 33599999999999998887653221 11 1123456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcE
Q 010552 169 SEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 246 (507)
Q Consensus 169 s~~~~~~~~~l~~ll~~alp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~ 246 (507)
|+.+|+++.++++++.+++|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|||||||+
T Consensus 197 s~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~ 276 (498)
T 4f3x_A 197 SEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPV 276 (498)
T ss_dssp CTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEE
T ss_pred CcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcE
Confidence 99999999999999999999999999999 667999999996 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHH
Q 010552 247 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA 325 (507)
Q Consensus 247 iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~~~ 325 (507)
||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.
T Consensus 277 IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~ 355 (498)
T 4f3x_A 277 IVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVA 355 (498)
T ss_dssp EECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999999999999999977 78899999999999999
Q ss_pred HHHHHHhc-CC-eEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEec
Q 010552 326 SLLDEDKV-SD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 402 (507)
Q Consensus 326 ~~i~~a~~-~~-~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t 402 (507)
++++++.+ |+ ++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 356 ~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 435 (498)
T 4f3x_A 356 SFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWT 435 (498)
T ss_dssp HHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEEC
Confidence 99999864 77 99999975 34799999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 403 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 403 ~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
+|.++++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|++.
T Consensus 436 ~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 436 KDISKAMRAASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp SBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999998753 48899999999999999999999999999999875
No 9
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=3.1e-99 Score=797.36 Aligned_cols=452 Identities=22% Similarity=0.350 Sum_probs=423.0
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++++.+|.||++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||.
T Consensus 46 ~~~~~~v~nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 124 (504)
T 3ek1_A 46 DGTTIKVTNPADGSVIGTV-PSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPL 124 (504)
T ss_dssp TCCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCEEEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 3457788999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.+++. |+..+++.+++++...+++... .. +....+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 125 ~ea~~-ev~~~~~~~~~~a~~~~~~~g~-~~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VV 200 (504)
T 3ek1_A 125 AEARG-EVLYAASFIEWFAEEAKRVYGD-TI--PAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMI 200 (504)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHTTCCEE-EE--CCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcCc-cc--ccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 99976 9999999999998877653221 11 11122456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ ||+|+||||+++|+.|++.+++++||+++||||
T Consensus 201 lKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGG 280 (504)
T 3ek1_A 201 VRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGG 280 (504)
T ss_dssp EECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCC
T ss_pred EECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCC
Confidence 999999999999999999999 99999999998 567899999996 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.++
T Consensus 281 k~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 359 (504)
T 3ek1_A 281 NAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAI 359 (504)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999987 7789999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEE
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF 400 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i 400 (507)
+++.++++++.+ |+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 360 ~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 438 (504)
T 3ek1_A 360 TKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYF 438 (504)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEE
Confidence 999999999865 7899999975 36899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 401 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 401 ~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
||+|.++++++++++++|+|+||++. ...+.+||||+|.||+|+++|.+|+++||+.|+|++..
T Consensus 439 ~t~d~~~a~~~a~~l~aG~V~vN~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 439 YTENFSRAIRVSEALEYGMVGHNTGL--ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp ECCBHHHHHHHHHHSCCSEEEESCSC--CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred EcCCHHHHHHHHHhCCcCeEEECCCC--CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999875 35688999999999999999999999999999998764
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=9.3e-99 Score=796.02 Aligned_cols=454 Identities=21% Similarity=0.312 Sum_probs=422.8
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhH--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 84 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 84 (507)
..++++.+|.||++|+.+ +.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|+++++.|+|||
T Consensus 51 ~~~~~v~nP~tg~~i~~v-~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 129 (517)
T 2o2p_A 51 SKTYNTINPTDGSVICQV-SLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAV 129 (517)
T ss_dssp GCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 456788999999999999 89999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCC-cceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 85 PFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPS-SAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 85 ~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
..++...|+..+++.+++++..++++.+.. .+......+. ..++.++|+|||++|+|||||+.+.++++++||++||+
T Consensus 130 ~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNt 208 (517)
T 2o2p_A 130 YTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNT 208 (517)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCE
Confidence 999874599999999999998887764421 1111000122 56899999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHh-cccCceeee
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILE 239 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~le 239 (507)
||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ ||+|+||||+++|+.|++.++ +++||+++|
T Consensus 209 VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lE 288 (517)
T 2o2p_A 209 VVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLE 288 (517)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEE
Confidence 99999999999999999999999 99999999999 567899999996 999999999999999999999 999999999
Q ss_pred cCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 010552 240 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNP 318 (507)
Q Consensus 240 lgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~ 318 (507)
||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++
T Consensus 289 LGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~ 367 (517)
T 2o2p_A 289 LGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHE 367 (517)
T ss_dssp CCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSH
T ss_pred CCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCH
Confidence 999999999999999999999999999 99999999999999999999999999999999999999977 7899999999
Q ss_pred HHHHHHHHHHHHHhc-CCeEEecCccC-CCCceeecEEEEcCCCCCCCcccccccceeeeEecCC--HHHHHHHHhcCCC
Q 010552 319 FHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPK 394 (507)
Q Consensus 319 ~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~ 394 (507)
.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|
T Consensus 368 ~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~ 447 (517)
T 2o2p_A 368 AHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447 (517)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCC
Confidence 999999999999864 78999999764 3699999999999999999999999999999999999 9999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 395 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 395 glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 448 GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 448 GLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp CSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 999999999999999999999999999998753 467899999999999999999999999999999764
No 11
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.3e-98 Score=793.55 Aligned_cols=451 Identities=24% Similarity=0.380 Sum_probs=422.3
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..++++.+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..
T Consensus 26 ~~~~~v~nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 104 (505)
T 3prl_A 26 GERISISAPASGVALGSI-PALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKK 104 (505)
T ss_dssp CCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHH
T ss_pred CCEEEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 467888999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCC---CCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY---PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
++.. |+..+++.++++++.++++.... .+...... +...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 105 ea~~-Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~ 182 (505)
T 3prl_A 105 SAIG-EVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNT 182 (505)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCE
Confidence 9976 99999999999999988765421 11110000 3456889999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeec
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 240 (507)
||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.++++.|+.|+ +|+|+||||+++|+.|++.++ +||+++||
T Consensus 183 VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lEL 260 (505)
T 3prl_A 183 VVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLEL 260 (505)
T ss_dssp EEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEEC
T ss_pred EEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEEC
Confidence 99999999999999999999998 99999999999 578899999996 999999999999999999888 89999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHH
Q 010552 241 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH 320 (507)
Q Consensus 241 gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~ 320 (507)
|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+++++||++++.+
T Consensus 261 GGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~ 339 (505)
T 3prl_A 261 GGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKS 339 (505)
T ss_dssp CCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHH
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999986778999999999
Q ss_pred HHHHHHHHHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 010552 321 FARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 399 (507)
Q Consensus 321 ~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~ 399 (507)
++++.++++++.+ |+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 340 ~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~ 417 (505)
T 3prl_A 340 AAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQAS 417 (505)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEE
T ss_pred HHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEE
Confidence 9999999999965 7799999974 589999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 400 FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 400 i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|||+|.++++++++++++|+|+||++.. ...+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 418 v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 418 IFTKDTDRAINIGKHLEVGTVHINAKTE-RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp EECSCHHHHHHHHHTSCSSEEEESSCCC-SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred EEcCCHHHHHHHHHHCCeeEEEEcCCCC-CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999865 35688999999999999999999999999999998875
No 12
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.9e-98 Score=790.49 Aligned_cols=451 Identities=23% Similarity=0.354 Sum_probs=422.7
Q ss_pred ccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh
Q 010552 8 AFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 87 (507)
Q Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 87 (507)
.++++.+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+
T Consensus 38 ~~~~v~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 116 (495)
T 1wnd_A 38 EKQPVYNPATGDVLLEI-AEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHS 116 (495)
T ss_dssp CEEEEEETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred CeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 56788999999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEc
Q 010552 88 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 167 (507)
Q Consensus 88 a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlK 167 (507)
+...|+..+++.++++++.++++.. +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 117 a~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 193 (495)
T 1wnd_A 117 AFNDEIPAIVDVFRFFAGAARCLNG-LAAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 193 (495)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCCEE-ECBEE--EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-ccccC--CCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEee
Confidence 8654899999999999988877643 21111 11233568899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCc
Q 010552 168 PSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 245 (507)
Q Consensus 168 ps~~~~~~~~~l~~ll~~alp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p 245 (507)
||+.+|+++.++++++.+++|+|+||+|+| +.+.++.|++|+ +|+|+||||+.+|+.|++.+++++||+++|||||||
T Consensus 194 ps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p 273 (495)
T 1wnd_A 194 PSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAP 273 (495)
T ss_dssp CCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCE
T ss_pred CCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCe
Confidence 999999999999999999999999999999 678899999997 999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHH
Q 010552 246 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARL 324 (507)
Q Consensus 246 ~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~~ 324 (507)
+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++
T Consensus 274 ~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv 352 (495)
T 1wnd_A 274 VIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 352 (495)
T ss_dssp EEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHH
Confidence 999999999999999999999 99999999999999999999999999999999999999987 7899999999999999
Q ss_pred HHHHHHHhc-C-CeEEecCc-cCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEe
Q 010552 325 ASLLDEDKV-S-DKIVYGGQ-RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFF 401 (507)
Q Consensus 325 ~~~i~~a~~-~-~~v~~gg~-~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~ 401 (507)
.++++++.+ | +++++||. ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 353 ~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 432 (495)
T 1wnd_A 353 GKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVW 432 (495)
T ss_dssp HHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEE
Confidence 999999865 6 79999997 54469999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 402 SDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 402 t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
|+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 433 t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 433 TKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999999999998753 457899999999999999999999999999999764
No 13
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.9e-98 Score=797.26 Aligned_cols=454 Identities=20% Similarity=0.330 Sum_probs=425.4
Q ss_pred cccceeeccCc-cccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 7 RAFQDFSCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 7 ~~~~~~~~~~~-~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++..+|.| |++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||.
T Consensus 50 ~~~~~~~nP~t~~~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 128 (538)
T 3qan_A 50 EDKIQSWNPARKDQLVGSV-SKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPW 128 (538)
T ss_dssp SSEEEEECSSSTTCEEEEE-ECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCH
T ss_pred CCeEEEECCCCCCcEEEEE-cCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 45677899999 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++.. |+..+++.+++++..+..+..++..+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 129 ~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VV 204 (538)
T 3qan_A 129 KEADA-DTAEAIDFLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVV 204 (538)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 99986 999999999999988656555443321 12456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcc------cCce
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH------LTPV 236 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~------~~~~ 236 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ +|+|+||||+.+|+.|++.++++ +||+
T Consensus 205 lKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv 284 (538)
T 3qan_A 205 LKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRV 284 (538)
T ss_dssp EECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEE
T ss_pred EECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccE
Confidence 999999999999999999998 99999999999 678999999996 99999999999999999999998 9999
Q ss_pred eeecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCccccc
Q 010552 237 ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRI 315 (507)
Q Consensus 237 ~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl 315 (507)
++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||+
T Consensus 285 ~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl 363 (538)
T 3qan_A 285 IVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPV 363 (538)
T ss_dssp EEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCC
T ss_pred EEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCc
Confidence 999999999999999999999999999999 99999999999999999999999999999999999999986 7899999
Q ss_pred CCHHHHHHHHHHHHHHhcCCeEEecCccCC-CCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 316 VNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 316 ~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
+++.+++++.++++++.+.+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 364 i~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~ 443 (538)
T 3qan_A 364 IDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEY 443 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSE
T ss_pred cCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCC
Confidence 999999999999999865339999997643 7999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 010552 395 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 395 glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~ 466 (507)
||++||||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++||+.|+|+++.
T Consensus 444 gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 444 GLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp ESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 999999999999999999999999999995433344789999999999999 999999999999999998865
No 14
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3.4e-98 Score=783.77 Aligned_cols=449 Identities=33% Similarity=0.591 Sum_probs=408.7
Q ss_pred cceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 010552 9 FQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 88 (507)
Q Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 88 (507)
.-++.+|.|+++|+++ |.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+..++
T Consensus 7 ~~~~~~~~~~~~i~~v-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 7 HHHHSSGHIDDDDKHM-NYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred cccccCCCCCCeeeec-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 4578999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcC
Q 010552 89 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 168 (507)
Q Consensus 89 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKp 168 (507)
+..|+..+++.++++++.+++|.+++.........+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 75699999999999999999887654333222233567889999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhhcCCCcEEEEeCChHhHHHHHhcCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEE
Q 010552 169 SEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 248 (507)
Q Consensus 169 s~~~~~~~~~l~~ll~~alp~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV 248 (507)
|+.+|+++.++++++.+++|+|+||+|+|+.+.++.|+++++|+|+||||+++|+.|++.+++++||+++|||||||+||
T Consensus 166 s~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV 245 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIV 245 (457)
T ss_dssp CTTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEE
T ss_pred CCCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeE
Confidence 99999999999999999999999999999888999999866999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 010552 249 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 328 (507)
Q Consensus 249 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~~~~~~~~i 328 (507)
++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||++++.+++++.+++
T Consensus 246 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i 320 (457)
T 3lns_A 246 LPDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLL 320 (457)
T ss_dssp CTTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999988 5556 999999999999999999
Q ss_pred HHHhcCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhc-CCCCceEEEecCCHHH
Q 010552 329 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS-KPKPLAAYFFSDDEQM 407 (507)
Q Consensus 329 ~~a~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~glsa~i~t~d~~~ 407 (507)
+++ ++++++||..+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+.
T Consensus 321 ~~a--~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~ 398 (457)
T 3lns_A 321 EAT--QGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDV 398 (457)
T ss_dssp HHC--CSEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHH
T ss_pred Hhc--CCeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHH
Confidence 986 3699999976557999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 408 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 408 ~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
++++++++++|+|+||++..+...+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 399 a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 399 AKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999986555678999999999999999999999999999999864
No 15
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.9e-99 Score=798.12 Aligned_cols=451 Identities=24% Similarity=0.327 Sum_probs=423.0
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 28 ~~~~~~v~nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 106 (517)
T 3r31_A 28 TGTPFESIFPATGEMIAKL-HAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPI 106 (517)
T ss_dssp TSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCEEEEECCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 4567889999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh---hcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCC
Q 010552 86 FETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGN 162 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN 162 (507)
.++ |+..+++.+++++...+. +......+. ..+. .+++++|+|||++|+|||||+.++++++++||++||
T Consensus 107 ~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN 179 (517)
T 3r31_A 107 QET---IVADPTSGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGN 179 (517)
T ss_dssp HHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTC
T ss_pred HHH---HHHHHHHHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCC
Confidence 988 899999999999888766 233332211 1234 889999999999999999999999999999999999
Q ss_pred eEEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeec
Q 010552 163 AVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 163 ~vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 240 (507)
+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.++++.|+.|+ ||+|+||||+++|+.|++.+++++||+++||
T Consensus 180 ~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lEl 259 (517)
T 3r31_A 180 AMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMEL 259 (517)
T ss_dssp EEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEc
Confidence 999999999999999999999999 99999999999888999999997 9999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHH
Q 010552 241 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF 319 (507)
Q Consensus 241 gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~ 319 (507)
|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.
T Consensus 260 GGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 338 (517)
T 3r31_A 260 GGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKA 338 (517)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHH
T ss_pred CCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999987 77999999999
Q ss_pred HHHHHHHHHHHHhc-CCeEEecCc-cC---CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 320 HFARLASLLDEDKV-SDKIVYGGQ-RD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 320 ~~~~~~~~i~~a~~-~~~v~~gg~-~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
+++++.++|+++.+ |+++++||. .+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 339 ~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 418 (517)
T 3r31_A 339 QQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEF 418 (517)
T ss_dssp HHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCC
Confidence 99999999999964 789999993 11 36999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 010552 395 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSF 467 (507)
Q Consensus 395 glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~ 467 (507)
||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++...
T Consensus 419 gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 419 GLAGGVFTADLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp ESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC
T ss_pred CeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCC
Confidence 999999999999999999999999999999753 57889999999999999999999999999999988754
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=4.3e-98 Score=788.11 Aligned_cols=446 Identities=22% Similarity=0.334 Sum_probs=418.3
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..++++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||..
T Consensus 40 ~~~~~v~nP~tg~~i~~v-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 118 (497)
T 3i44_A 40 PHDLYVIDPSTEEACAVI-SLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPID 118 (497)
T ss_dssp CCEEEEEETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 457889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEE-eeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII-SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
+++..|+..+++.++++++.+..+..+... ..+...+++ ++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 119 ~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VV 193 (497)
T 3i44_A 119 MALNAQTATGSSHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMV 193 (497)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 997459999999999999887765432111 123456778 99999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ ||+|+||||+++|+.|++.+++++||+++||||
T Consensus 194 lKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGG 273 (497)
T 3i44_A 194 LKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGG 273 (497)
T ss_dssp EECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred EECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCC
Confidence 999999999999999999999 99999999999 678999999996 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++||| +.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ .+++||++++.++
T Consensus 274 k~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~ 351 (497)
T 3i44_A 274 KGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQY 351 (497)
T ss_dssp CCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHH
T ss_pred CCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHH
Confidence 99999999999 999999999999 99999999999999999999999999999999999999987 7889999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCc-cC---CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQ-RD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~-~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
+++.++++++.+ |+++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 352 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 431 (497)
T 3i44_A 352 DKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGL 431 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCc
Confidence 999999999865 789999994 32 2699999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 463 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~ 463 (507)
++||||+|.++++++++++++|+|+||. . ...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 432 ~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 432 TNYIQSQDRSKCRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp EEEEECSCHHHHHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred EEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9999999999999999999999999994 2 35678999999999999999999999999999985
No 17
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.2e-98 Score=793.80 Aligned_cols=452 Identities=22% Similarity=0.329 Sum_probs=424.2
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..++++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+||+..
T Consensus 27 ~~~~~~~nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 105 (497)
T 3k2w_A 27 SDTIDILSPSTGKVIGEI-PAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLS 105 (497)
T ss_dssp CCEEEEECSSSCSEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred CCEEEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 467889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++.. |+..+++.+++++..++++.... .+ ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 106 ~a~~-ev~~~~~~~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 181 (497)
T 3k2w_A 106 VAEM-EVDVTATFIDYGCDNALTIEGDI-LP--SDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVL 181 (497)
T ss_dssp HHHH-HHHHHHHHHHHHHHTTTTCCEEE-EE--CSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcCcc-cc--cCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 9975 99999999999998887765432 11 11234567899999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCC
Q 010552 167 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGK 243 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 243 (507)
|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|||||
T Consensus 182 Kps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk 261 (497)
T 3k2w_A 182 KPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGK 261 (497)
T ss_dssp ECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCC
T ss_pred ECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCC
Confidence 99999999999999999999 99999999999 668999999997 9999999999999999999999999999999999
Q ss_pred CcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHH
Q 010552 244 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA 322 (507)
Q Consensus 244 ~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~ 322 (507)
||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++
T Consensus 262 ~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~ 340 (497)
T 3k2w_A 262 APMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREID 340 (497)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHH
T ss_pred CceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999987 77899999999999
Q ss_pred HHHHHHHHHhc-CCeEEecCcc--C-C--CCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 323 RLASLLDEDKV-SDKIVYGGQR--D-E--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 323 ~~~~~i~~a~~-~~~v~~gg~~--~-~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
++.++++++.+ |+++++||.. . . .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 341 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 420 (497)
T 3k2w_A 341 NIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGL 420 (497)
T ss_dssp HHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEES
T ss_pred HHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCc
Confidence 99999999854 7899999973 2 2 689999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
++||||+|.+.++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 421 ~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 421 SAYVHTQSFANINQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp EEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred EEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 99999999999999999999999999998753 588999999999999999999999999999998865
No 18
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-98 Score=793.58 Aligned_cols=452 Identities=25% Similarity=0.383 Sum_probs=425.8
Q ss_pred cccceeeccCc-cccccccccCCCHHHHHHHHHHHHHHh--HhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010552 7 RAFQDFSCSAT-MAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK 83 (507)
Q Consensus 7 ~~~~~~~~~~~-~~~i~~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 83 (507)
..++++.+|.| |++|+.+ +.++.+|+++++++|++|| ..|+.++.++|.++|++++++|++++++|+++++.|+||
T Consensus 37 ~~~~~v~nP~t~g~~i~~~-~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 115 (528)
T 3u4j_A 37 GSTIDRVSPGHAGEVVGTW-PEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGK 115 (528)
T ss_dssp CCEEEEECTTSTTCEEEEE-ECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCCCcEEEEE-eCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45778899999 9999999 9999999999999999999 789999999999999999999999999999999999999
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 84 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 84 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
|..++. .|+..+++.++++++.++++.. +..+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 116 ~~~ea~-~ev~~~~~~l~~~a~~~~~~~~-~~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~ 191 (528)
T 3u4j_A 116 PIAQAR-GEIGFCADLWSYAAGQARALEG-QTHN--NIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCT 191 (528)
T ss_dssp CHHHHH-HHHHHHHHHHHHHHHHHTTCCE-EEEC--CSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHH-HHHHHHHHHHHHHHHHHHHhcC-eeec--cCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCe
Confidence 999994 5999999999999998887643 2111 11134567899999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeec
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 240 (507)
||+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ ||+|+||||+++|+.|++.+++++||+++||
T Consensus 192 VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lEL 271 (528)
T 3u4j_A 192 VVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLEL 271 (528)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred EEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEec
Confidence 99999999999999999999999 99999999999 778999999996 9999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHH
Q 010552 241 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF 319 (507)
Q Consensus 241 gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~ 319 (507)
|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.
T Consensus 272 GGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 350 (528)
T 3u4j_A 272 GGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEA 350 (528)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHH
T ss_pred CCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999987 78999999999
Q ss_pred HHHHHHHHHHHHhc-CCeEEecCccCC--CCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 320 HFARLASLLDEDKV-SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 320 ~~~~~~~~i~~a~~-~~~v~~gg~~~~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
+++++.++++++.+ |+++++||.... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 351 ~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 430 (528)
T 3u4j_A 351 HAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGL 430 (528)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCc
Confidence 99999999999865 779999997643 799999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++..
T Consensus 431 ~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 431 SASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp EEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred EEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999999764 4688999999999999999999999999999999875
No 19
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=3.2e-98 Score=790.89 Aligned_cols=451 Identities=24% Similarity=0.358 Sum_probs=423.5
Q ss_pred ccc-ceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 7 RAF-QDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 7 ~~~-~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
..+ .+..+|.||++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||.
T Consensus 34 ~~~~~~v~nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 112 (503)
T 1a4s_A 34 GATTEPVFEPATGRVLCQM-VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI 112 (503)
T ss_dssp TCCCEEEECTTTCCEEEEE-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCceEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 345 789999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++.. |+..+++.++++++.++++.. +..+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 113 ~ea~~-ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VV 187 (503)
T 1a4s_A 113 TEAEY-DIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVV 187 (503)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 99965 999999999999998887653 221111 2346788999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGK 243 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 243 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+|+.++++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++|||||
T Consensus 188 lKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk 267 (503)
T 1a4s_A 188 FKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGK 267 (503)
T ss_dssp EECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCC
T ss_pred EECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCc
Confidence 999999999999999999999 99999999999338899999997 9999999999999999999999999999999999
Q ss_pred CcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHH
Q 010552 244 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA 322 (507)
Q Consensus 244 ~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~ 322 (507)
||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++
T Consensus 268 ~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 346 (503)
T 1a4s_A 268 SPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLD 346 (503)
T ss_dssp CEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999987 78999999999999
Q ss_pred HHHHHHHHHhc-CCeEEecCccC-------CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 323 RLASLLDEDKV-SDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 323 ~~~~~i~~a~~-~~~v~~gg~~~-------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 347 rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 426 (503)
T 1a4s_A 347 KVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTF 426 (503)
T ss_dssp HHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCC
Confidence 99999999864 78999999754 35899999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 395 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 395 glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 427 gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 427 GLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999999999999999998764 4678999999999999999999999999999998764
No 20
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3.7e-98 Score=789.34 Aligned_cols=452 Identities=24% Similarity=0.340 Sum_probs=424.4
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhH---hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK 83 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 83 (507)
..++++.+|.||++++.+ +.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+||
T Consensus 35 ~~~~~v~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 113 (501)
T 1bxs_A 35 GKKFPVFNPATEEKLCEV-EEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGK 113 (501)
T ss_dssp CCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred CCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456788999999999999 89999999999999999999 89999999999999999999999999999999999999
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 84 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 84 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
|..++...|+..+++.++++++.++++.+.. .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 114 ~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~ 189 (501)
T 1bxs_A 114 LFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNT 189 (501)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCe
Confidence 9998766699999999999999988875431 111 223456889999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHh-cccCceeee
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILE 239 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~le 239 (507)
||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+.+|+.|++.++ +++||+++|
T Consensus 190 VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lE 269 (501)
T 1bxs_A 190 VVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLE 269 (501)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEe
Confidence 99999999999999999999999 99999999999 678899999996 999999999999999999999 999999999
Q ss_pred cCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 010552 240 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNP 318 (507)
Q Consensus 240 lgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~ 318 (507)
||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++
T Consensus 270 LGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~ 348 (501)
T 1bxs_A 270 LGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDK 348 (501)
T ss_dssp CCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCH
T ss_pred cCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCH
Confidence 999999999999999999999999999 99999999999999999999999999999999999999987 7799999999
Q ss_pred HHHHHHHHHHHHHhc-CCeEEecCccC-CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 319 FHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 319 ~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 349 ~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 428 (501)
T 1bxs_A 349 EQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCe
Confidence 999999999999864 77999999763 3699999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 429 ~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 429 SAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp EEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 9999999999999999999999999998753 4578999999999999999999999999999998763
No 21
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.7e-98 Score=791.35 Aligned_cols=453 Identities=21% Similarity=0.288 Sum_probs=422.3
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..++++.+|.||++|+.+ +.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..
T Consensus 41 ~~~~~v~nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 119 (521)
T 4e4g_A 41 GRVSNIFNPATGEVQGTV-ALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTID 119 (521)
T ss_dssp SCEEEEEETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHH
T ss_pred CCEEEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 467889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++.. |+..+++.+++++...+. ....... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 120 ea~~-Ev~~~~~~l~~~a~~~~~-~~~~~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVl 195 (521)
T 4e4g_A 120 DAKG-DIVRGLEVCEFVIGIPHL-QKSEFTE--GAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFIL 195 (521)
T ss_dssp HHHH-HHHHHHHHHHHHHTHHHH-TCEEEEE--EEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHH-hcCcccc--cCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9975 999999999998875543 3322111 11124467889999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCC
Q 010552 167 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 244 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 244 (507)
|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|+.|+ ||+|+||||+.+|+.|++.+++++||+++||||||
T Consensus 196 Kpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~ 275 (521)
T 4e4g_A 196 KPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKN 275 (521)
T ss_dssp ECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCE
T ss_pred ECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCC
Confidence 99999999999999999999 99999999999888889999996 99999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCC-chHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHH
Q 010552 245 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA 322 (507)
Q Consensus 245 p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~ 322 (507)
|+||++|||++.|++.+++++| .|+||.|++++|||||++ ++|+|+++|+++++++++|+|.+ ++++||++++.+++
T Consensus 276 p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~ 354 (521)
T 4e4g_A 276 HMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQ 354 (521)
T ss_dssp EEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHH
Confidence 9999999999999999999999 999999999999999999 99999999999999999999977 77899999999999
Q ss_pred HHHHHHHHHhc-CCeEEecCccC-----CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 323 RLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 323 ~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
++.++++++.+ |+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 355 rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 434 (521)
T 4e4g_A 355 RIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGN 434 (521)
T ss_dssp HHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEES
T ss_pred HHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCe
Confidence 99999999854 78999999641 4699999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~v~~~~ 466 (507)
++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 435 aa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 435 GVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp EEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred EEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 9999999999999999999999999998753 34578999999999999 799999999999999998864
No 22
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.2e-98 Score=790.95 Aligned_cols=452 Identities=25% Similarity=0.350 Sum_probs=424.4
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhH---hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK 83 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 83 (507)
..++++.+|.||++|+.+ +.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|+++++.|+||
T Consensus 34 ~~~~~v~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 112 (500)
T 1o04_A 34 RKTFPTVNPSTGEVICQV-AEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGK 112 (500)
T ss_dssp CCEEEEEETTTTEEEEEE-ECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 456788999999999999 89999999999999999999 89999999999999999999999999999999999999
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 84 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 84 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
|..++...|+..+++.++++++.++++.+.. .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 113 ~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~ 188 (500)
T 1o04_A 113 PYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNV 188 (500)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCE
Confidence 9998866699999999999999888765431 111 223456889999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHh-cccCceeee
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILE 239 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~le 239 (507)
||+|||+.+|+++..|++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+.+|+.|++.++ +++||+++|
T Consensus 189 VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lE 268 (500)
T 1o04_A 189 VVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLE 268 (500)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEE
Confidence 99999999999999999999999 99999999999 678899999996 999999999999999999999 999999999
Q ss_pred cCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 010552 240 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNP 318 (507)
Q Consensus 240 lgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~ 318 (507)
||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ .+++||++++
T Consensus 269 LGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~ 347 (500)
T 1o04_A 269 LGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347 (500)
T ss_dssp CCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSH
T ss_pred cCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCH
Confidence 999999999999999999999999999 99999999999999999999999999999999999999987 7899999999
Q ss_pred HHHHHHHHHHHHHhc-CCeEEecCccC-CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 319 FHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 319 ~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 348 ~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 427 (500)
T 1o04_A 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427 (500)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCc
Confidence 999999999999864 77999999764 3699999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 428 ~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp EEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 9999999999999999999999999998764 4578999999999999999999999999999998763
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=8.5e-98 Score=785.16 Aligned_cols=452 Identities=23% Similarity=0.359 Sum_probs=422.8
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++++.+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||.
T Consensus 20 ~~~~~~v~~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 98 (479)
T 2imp_A 20 GDAWIDVVNPATEAVISRI-PDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQ 98 (479)
T ss_dssp CSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 3467889999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++. .|+..+++.++++++.++++.+.. .+ ....+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 99 ~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 174 (479)
T 2imp_A 99 QLAE-VEVAFTADYIDYMAEWARRYEGEI-IQ--SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIV 174 (479)
T ss_dssp HHHH-HHHHHHHHHHHHHHTTTTTCCCEE-EC--CSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhhCCc-cc--cCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9997 499999999999988776654432 11 1112346789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ +|+|+||||+++|+.|++.+++++||+++||||
T Consensus 175 lKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGG 254 (479)
T 2imp_A 175 IKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGG 254 (479)
T ss_dssp EECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred EECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCC
Confidence 999999999999999999999 99999999999 456899999995 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC--CCcccccCCHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME--SKDLSRIVNPFH 320 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~--~~~~gpl~~~~~ 320 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+
T Consensus 255 k~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~ 333 (479)
T 2imp_A 255 KAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAA 333 (479)
T ss_dssp CCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHH
T ss_pred cCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999976 678999999999
Q ss_pred HHHHHHHHHHHhc-CCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceE
Q 010552 321 FARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAA 398 (507)
Q Consensus 321 ~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa 398 (507)
++++.++++++.+ |+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 334 ~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a 413 (479)
T 2imp_A 334 LERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTS 413 (479)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeE
Confidence 9999999999864 7799999975 3368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 399 YFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 399 ~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
||||+|.+.++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 414 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 414 SIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp EEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred EEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999999999987753 57899999999999999999999999999999865
No 24
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.8e-97 Score=782.99 Aligned_cols=452 Identities=23% Similarity=0.356 Sum_probs=422.8
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...+++..+|.||++++.+ +.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++++.|+|||.
T Consensus 23 ~~~~~~~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 101 (481)
T 3jz4_A 23 NGEAIDVTNPANGDKLGSV-PKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPL 101 (481)
T ss_dssp TCCEEEEECTTTCCEEEEE-ECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4567889999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++.. |+..+++.+++++....+... ... +....+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 102 ~~a~~-ev~~~~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 177 (481)
T 3jz4_A 102 AEAKG-EISYAASFIEWFAEEGKRIYG-DTI--PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMV 177 (481)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHGGGCCE-EEE--CCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcC-ccc--cccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 99975 999999999988877655322 111 11123456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++||||
T Consensus 178 lKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGG 257 (481)
T 3jz4_A 178 LKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGG 257 (481)
T ss_dssp EECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred EECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCC
Confidence 999999999999999999998 99999999999 678899999996 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.++
T Consensus 258 k~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~ 336 (481)
T 3jz4_A 258 NAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAV 336 (481)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999977 7789999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 399 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~ 399 (507)
+++.++++++.+ |+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 337 ~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~ 416 (481)
T 3jz4_A 337 AKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAY 416 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEE
Confidence 999999999865 7899999976 44689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 400 FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 400 i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 417 v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 417 FYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp EECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999764 467899999999999999999999999999999864
No 25
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=9.3e-98 Score=783.51 Aligned_cols=442 Identities=27% Similarity=0.434 Sum_probs=417.4
Q ss_pred ceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh
Q 010552 10 QDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 89 (507)
Q Consensus 10 ~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 89 (507)
++..+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++.
T Consensus 14 ~~~~nP~tg~~i~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 92 (486)
T 3pqa_A 14 MDVINPYSLEVIKKI-PALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR 92 (486)
T ss_dssp EEEECTTTCCEEEEE-CCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred eEEECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 789999999999999 9999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCC
Q 010552 90 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 169 (507)
Q Consensus 90 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps 169 (507)
. |+..+++.++++++.++++.... .+ ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 93 ~-Ev~~~~~~~~~~a~~~~~~~~~~-~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 166 (486)
T 3pqa_A 93 V-EVERSIGTFKLAAFYVKEHRDEV-IP----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPS 166 (486)
T ss_dssp H-HHHHHHHHHHHHHHHHHHCCEEE-EC----CTTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCce-ec----CCCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 5 99999999999999988864322 11 124567899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-----cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 170 EIAPATSSLLAKLLEDY-----VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 170 ~~~~~~~~~l~~ll~~a-----lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ +|+|+||||+.+|+.|++.++ +||+++||||
T Consensus 167 ~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGG 244 (486)
T 3pqa_A 167 SKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGG 244 (486)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCC
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCC
Confidence 99999999999999998 99999999999 556799999996 999999999999999999887 8999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.++
T Consensus 245 k~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 323 (486)
T 3pqa_A 245 VNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHA 323 (486)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHH
T ss_pred cCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999977 7789999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEE
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF 400 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i 400 (507)
+++.++++++.+ |+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||
T Consensus 324 ~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v 399 (486)
T 3pqa_A 324 EWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAI 399 (486)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEE
T ss_pred HHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEE
Confidence 999999999864 7899999965 5899999999 9999999999999999999999999 999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 401 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 401 ~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 400 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 400 FTNDINKSLKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp ECSBHHHHHHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred ECCCHHHHHHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 9999999999999999999999998753 3458999999999999999999999999999998875
No 26
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-98 Score=788.60 Aligned_cols=451 Identities=24% Similarity=0.371 Sum_probs=423.0
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhH--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 84 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 84 (507)
..+++..+|.||++++.+ +.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||
T Consensus 23 ~~~~~~~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 101 (495)
T 3b4w_A 23 SDVIEVRCPATGEYVGKV-PMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP 101 (495)
T ss_dssp CCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 456788999999999999 89999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeE
Q 010552 85 PFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 164 (507)
Q Consensus 85 ~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~v 164 (507)
..++...|+..+++.++++++.++++.+.. .+ . ..+...++.++|+|||++|+|||||+.++++++++||++||+|
T Consensus 102 ~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~--~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~V 177 (495)
T 3b4w_A 102 PTIIETMHWMGSMGAMNYFAGAADKVTWTE-TR--T-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTI 177 (495)
T ss_dssp HHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EE--E-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cc--C-CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEE
Confidence 999873599999999999998887765421 11 1 1233568899999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 165 VLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 165 VlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
|+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ +|+|+||||+.+|+.|++.+++++||+++||||
T Consensus 178 VlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGG 257 (495)
T 3b4w_A 178 VLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGG 257 (495)
T ss_dssp EEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred EEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCC
Confidence 9999999999999999999999 99999999999778899999995 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.++
T Consensus 258 k~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 336 (495)
T 3b4w_A 258 KSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQR 336 (495)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHH
T ss_pred cceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999977 7899999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCccCC---CCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCce
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 397 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gls 397 (507)
+++.++++++.+ |+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 337 ~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~ 416 (495)
T 3b4w_A 337 TRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLA 416 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSC
T ss_pred HHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeE
Confidence 999999999864 679999997643 6999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 398 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 398 a~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
+||||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 417 a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 417 GSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp CEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred EEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 99999999999999999999999999874 4578999999999999999999999999999998753
No 27
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-97 Score=787.59 Aligned_cols=451 Identities=22% Similarity=0.342 Sum_probs=422.6
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..++++.+|.||++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+||+..
T Consensus 41 ~~~~~~~nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 119 (515)
T 2d4e_A 41 GETFPSLDPATNEVLGVA-ARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLR 119 (515)
T ss_dssp CCEEEEEETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 456789999999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++. .|+..+++.++++++.++++.. ...+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 120 ea~-~ev~~~~~~l~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 195 (515)
T 2d4e_A 120 IVR-AQVARAAENFAFYAEYAEHAME-DRTFP--VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVL 195 (515)
T ss_dssp HHH-HHHHHHHHHHHHHHTTGGGTTC-EEECC--BTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeee
Confidence 998 5999999999999887777643 21111 1223456889999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCC
Q 010552 167 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGK 243 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 243 (507)
|||+.+|+++..+++++.++ +|+|+||+|+| +.++++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++|||||
T Consensus 196 Kps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk 275 (515)
T 2d4e_A 196 KPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGK 275 (515)
T ss_dssp ECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCC
T ss_pred cCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCc
Confidence 99999999999999999999 99999999999 567899999995 9999999999999999999999999999999999
Q ss_pred CcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHH
Q 010552 244 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA 322 (507)
Q Consensus 244 ~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~ 322 (507)
||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++
T Consensus 276 ~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 354 (515)
T 2d4e_A 276 SPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQ 354 (515)
T ss_dssp CEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHH
T ss_pred CeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999987 68999999999999
Q ss_pred HHHHHHHHHhc-CCeEEecCccCC---------CCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC
Q 010552 323 RLASLLDEDKV-SDKIVYGGQRDE---------KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 392 (507)
Q Consensus 323 ~~~~~i~~a~~-~~~v~~gg~~~~---------~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 392 (507)
++.++|+++.+ |+++++||.... .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|++
T Consensus 355 rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 433 (515)
T 2d4e_A 355 RVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDT 433 (515)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred HHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcC
Confidence 99999999864 789999997643 699999999999 9999999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 393 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 393 ~~glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
+|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 434 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 434 KYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp SCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 99999999999999999999999999999998753 5678999999999999999999999999999998864
No 28
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.4e-97 Score=782.55 Aligned_cols=463 Identities=24% Similarity=0.300 Sum_probs=429.1
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
....+++.+|.||++++.+ +.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVI-IPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEE-CCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCEEeeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 3567899999999999999 899999999999999999999999999999999999999999999999999999999985
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.+. .|+..+++.+++++....++.+....... ..+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 83 ~~~--~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 83 ITV--LEIDSFLASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred HHH--HHHHHHHHHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 443 49999999999998888777654432211 12345567889999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 244 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 244 (507)
+|||+.+|+++..+++++.++ +|+|++|+++|+.+.+..|+.| +|+|+||||+.+|+.|++.+++++||+++||||||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~ 237 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKD 237 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCE
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcC
Confidence 999999999999999999998 9999999999999999999977 89999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHH
Q 010552 245 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFAR 323 (507)
Q Consensus 245 p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~ 323 (507)
|+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|.+ .+++||++++.+.++
T Consensus 238 p~iV~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 238 PAIVLESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred ccccCchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999987 788999999999999
Q ss_pred HHHHHHHHhc-CCeEEecCccC--CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEE
Q 010552 324 LASLLDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF 400 (507)
Q Consensus 324 ~~~~i~~a~~-~~~v~~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i 400 (507)
+.++++++.+ +++++.||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 9999999865 67898998753 46899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEecCCCCCCCcC
Q 010552 401 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 475 (507)
Q Consensus 401 ~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~ 475 (507)
||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+++......++||
T Consensus 397 ~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 397 FAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp ECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred EeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 999999999999999999999999887667788999999999998 889999999999999999987655555554
No 29
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.3e-97 Score=777.53 Aligned_cols=451 Identities=22% Similarity=0.356 Sum_probs=425.6
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
...+++.+|.||++|+.+ +.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..
T Consensus 6 ~~~~~~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAM-PWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp CCCSEEECTTTCCEEEEC-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred cCccceECCCCCCEEEEe-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 356789999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++.. |+..+++.++++++..+++..... ....+...+++++|+|||++|+|||||+++.++++++||++||+||+
T Consensus 85 ~a~~-ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QARA-EVTKSAALCDWYAEHGPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHH-HHHHHHHHHHHHHHhHHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 9975 999999999999998887765431 11224567889999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCC
Q 010552 167 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 244 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 244 (507)
|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+||||
T Consensus 160 Kps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~ 239 (462)
T 3etf_A 160 KHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239 (462)
T ss_dssp ECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred ECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCC
Confidence 99999999999999999998 99999999999888899999996 99999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHH
Q 010552 245 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFAR 323 (507)
Q Consensus 245 p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~ 323 (507)
|+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~ 318 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDE 318 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999987 778999999999999
Q ss_pred HHHHHHHHhc-CCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEe
Q 010552 324 LASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFF 401 (507)
Q Consensus 324 ~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~ 401 (507)
+.++++++.+ |+++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 319 v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~ 398 (462)
T 3etf_A 319 LHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIF 398 (462)
T ss_dssp HHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEE
T ss_pred HHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999865 7899999974 3579999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 402 SDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 402 t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 399 t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 399 TADDTLAAEMAARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CSCHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999999763 5688999999999999999999999999999998753
No 30
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1e-96 Score=782.46 Aligned_cols=453 Identities=21% Similarity=0.326 Sum_probs=422.7
Q ss_pred ccceeeccC-ccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 8 AFQDFSCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 8 ~~~~~~~~~-~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
.+.+..+|. ||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..
T Consensus 51 ~~~~~~nP~~t~~~i~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 129 (516)
T 1uzb_A 51 ERMVSLNPSAPSEVVGTT-AKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWV 129 (516)
T ss_dssp SEEEEEETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CeEEEECCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 467889999 69999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++.. |+..+++.++++++.++++.+.... . ....+...++.++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 130 ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVl 206 (516)
T 1uzb_A 130 EASA-DVAEAIDFIEYYARAALRYRYPAVE-V-VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIA 206 (516)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHGGGCSSCCC-C-CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcCCccc-c-cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEE
Confidence 9974 9999999999999999887654311 0 11123456889999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHh------cccCcee
Q 010552 167 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA------KHLTPVI 237 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~ 237 (507)
|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|++|+ +|+|+||||+++|+.|++.++ +++||++
T Consensus 207 Kps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~ 286 (516)
T 1uzb_A 207 KPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAY 286 (516)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEE
T ss_pred eCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeE
Confidence 99999999999999999999 99999999999 678899999997 999999999999999999998 7899999
Q ss_pred eecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCC
Q 010552 238 LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 317 (507)
Q Consensus 238 lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~ 317 (507)
+|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|++++++||+++
T Consensus 287 lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~ 365 (516)
T 1uzb_A 287 VETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVS 365 (516)
T ss_dssp EECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSC
T ss_pred EecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCC
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999933789999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 318 PFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 318 ~~~~~~~~~~i~~a~~~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
+.+++++.++++++.+.+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 366 ~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL 445 (516)
T 1uzb_A 366 AEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGL 445 (516)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCc
Confidence 99999999999999765689999975 34699999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~v~~~ 465 (507)
++||||+|.+.++++++++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++|++.|+|+++
T Consensus 446 ~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 446 TGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp EEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred eEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 99999999999999999999999999997655556789999999999994 7899999999999999763
No 31
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.3e-97 Score=782.16 Aligned_cols=453 Identities=23% Similarity=0.357 Sum_probs=406.1
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...+++..+|.||++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 26 ~~~~~~~~~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 104 (508)
T 3r64_A 26 SDRISTNINPYDDSVIAES-KQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTR 104 (508)
T ss_dssp SSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCH
T ss_pred CCCEEEeECCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3567889999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++.. |+..+++.+++++...++... ..+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 105 ~~a~~-Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 180 (508)
T 3r64_A 105 SKANL-EITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVV 180 (508)
T ss_dssp HHHHH-HHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEE
Confidence 99986 999999999988766554322 11110 112456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHH-HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhc--ccCceeee
Q 010552 166 LKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAK--HLTPVILE 239 (507)
Q Consensus 166 lKps~~~~~~~-~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~--~~~~~~le 239 (507)
+|||+.+|+++ .++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++ ++||+++|
T Consensus 181 lKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lE 260 (508)
T 3r64_A 181 IKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALE 260 (508)
T ss_dssp EECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEE
T ss_pred EECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEee
Confidence 99999999999 9999999999 99999999999 578999999996 9999999999999999999998 89999999
Q ss_pred cCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 010552 240 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNP 318 (507)
Q Consensus 240 lgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~ 318 (507)
||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++
T Consensus 261 lGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 339 (508)
T 3r64_A 261 LGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIND 339 (508)
T ss_dssp CCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCH
T ss_pred cCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCH
Confidence 999999999999999999999999999 99999999999999999999999999999999999999987 7789999999
Q ss_pred HHHHHHHHHHHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCce
Q 010552 319 FHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 397 (507)
Q Consensus 319 ~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gls 397 (507)
.+++++.++++++.+ |+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 340 ~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~ 417 (508)
T 3r64_A 340 SQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLS 417 (508)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSC
T ss_pred HHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcE
Confidence 999999999999965 6799999975 6899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 010552 398 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSF 467 (507)
Q Consensus 398 a~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~ 467 (507)
+||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 418 a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 418 AAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp EEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 9999999999999999999999999998754 56889999999999999999999999999999998764
No 32
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.8e-97 Score=780.50 Aligned_cols=450 Identities=24% Similarity=0.375 Sum_probs=421.8
Q ss_pred ccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh
Q 010552 8 AFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 87 (507)
Q Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 87 (507)
.+++..+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+
T Consensus 26 ~~~~~~~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 104 (487)
T 2w8n_A 26 ATFPVQDPASGAALGMV-ADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE 104 (487)
T ss_dssp CEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred CeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 55788999999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEc
Q 010552 88 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 167 (507)
Q Consensus 88 a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlK 167 (507)
+.. |+..+++.++++++.++++.. ...+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 105 a~~-ev~~~~~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 180 (487)
T 2w8n_A 105 AHG-EILYSAFFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVK 180 (487)
T ss_dssp HHH-HHHHHHHHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 975 999999999999988766322 21111 12345678999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhh-cCCCcEEEEe---C-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecC
Q 010552 168 PSEIAPATSSLLAKLLEDY-VDNSAVRVVE---G-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG 241 (507)
Q Consensus 168 ps~~~~~~~~~l~~ll~~a-lp~g~v~~v~---g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg 241 (507)
||+.+|+++..|++++.++ +|+|+||+|+ | +.+.++.|++|+ +|+|+||||+.+|+.|++.+++++||+++|||
T Consensus 181 ps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElG 260 (487)
T 2w8n_A 181 PAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELG 260 (487)
T ss_dssp CCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecC
Confidence 9999999999999999999 9999999999 8 667899999997 99999999999999999999999999999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHH
Q 010552 242 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE-FFGKNPME-SKDLSRIVNPF 319 (507)
Q Consensus 242 G~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~-l~~g~~~~-~~~~gpl~~~~ 319 (507)
||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++ +++|+|.+ ++++||++++.
T Consensus 261 Gk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~ 339 (487)
T 2w8n_A 261 GLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEK 339 (487)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHH
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHH
Confidence 9999999999999999999999999 999999999999999999999999999999999 99999987 77899999999
Q ss_pred HHHHHHHHHHHHhc-CCeEEecCccCCCCc-eeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCce
Q 010552 320 HFARLASLLDEDKV-SDKIVYGGQRDEKQL-KIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 397 (507)
Q Consensus 320 ~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~-~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gls 397 (507)
+++++.++++++.+ |+++++||.....|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 340 ~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~ 419 (487)
T 2w8n_A 340 AVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLA 419 (487)
T ss_dssp HHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSE
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999865 679999997654689 9999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 398 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 398 a~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
+||||+|.+.++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 420 a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 420 GYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp EEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred EEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 9999999999999999999999999997653 46799999999999999999999999999999864
No 33
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.5e-96 Score=778.39 Aligned_cols=453 Identities=24% Similarity=0.343 Sum_probs=425.4
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...+++..+|.||++++.+ +.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 20 ~~~~~~~~~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 98 (490)
T 2ve5_A 20 SGATFETINPANGEVLAKV-QRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPL 98 (490)
T ss_dssp SSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 4567889999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.+++..|+..+++.++++++.++++.. ...+ ...+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 99 ~ea~~~ev~~~~~~~~~~a~~~~~~~~-~~~~---~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vV 174 (490)
T 2ve5_A 99 AETRSVDIVTGADVLEYYAGLVPAIEG-EQIP---LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMI 174 (490)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHGGGCCE-EEEE---EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcC-cccc---CCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 999755999999999999988776422 2111 123456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHH-hcccCceeeecC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAA-AKHLTPVILELG 241 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a-~~~~~~~~lelg 241 (507)
+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+ ++++||+++|||
T Consensus 175 lKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElG 254 (490)
T 2ve5_A 175 FKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELG 254 (490)
T ss_dssp EECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECC
T ss_pred EECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcC
Confidence 999999999999999999999 99999999999 778999999997 99999999999999999999 999999999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHH
Q 010552 242 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFH 320 (507)
Q Consensus 242 G~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~ 320 (507)
||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+
T Consensus 255 Gk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~ 333 (490)
T 2ve5_A 255 GKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPH 333 (490)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHH
T ss_pred CCceeEECCCCCHHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHH
Confidence 9999999999999999999999999 99999999999999999999999999999999999999977 778999999999
Q ss_pred HHHHHHHHHHHhc-CCeEEecCccC-----CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 321 FARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 321 ~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 334 ~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~ 413 (490)
T 2ve5_A 334 MESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEY 413 (490)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCC
Confidence 9999999999865 78999999752 36899999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 395 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 395 glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 414 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 414 GLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 999999999999999999999999999999764 4688999999999999999999999999999998864
No 34
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.3e-96 Score=778.78 Aligned_cols=452 Identities=17% Similarity=0.246 Sum_probs=418.0
Q ss_pred cccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 7 RAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..+++..+|.||++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..
T Consensus 36 ~~~~~v~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 114 (500)
T 2j6l_A 36 GEVITTYCPANNEPIARV-RQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILV 114 (500)
T ss_dssp SCEEEEEETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHH
T ss_pred CCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 346788999999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++. .|+..+++.+++++..++++... ..+ ....+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 115 ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 190 (500)
T 2j6l_A 115 EGV-GEVQEYVDICDYAVGLSRMIGGP-ILP--SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLW 190 (500)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTTCCCB-EEC--CSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCc-ccc--ccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEE
Confidence 985 59999999999998877654321 111 11122345778999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhh----h-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeec
Q 010552 167 KPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~----a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 240 (507)
|||+.+|+++.++++++.+ + +|+|+||+|+|+.++++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++||
T Consensus 191 Kps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lEL 270 (500)
T 2j6l_A 191 KGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLEL 270 (500)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEc
Confidence 9999999999999998775 4 99999999999778899999996 9999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHH
Q 010552 241 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF 319 (507)
Q Consensus 241 gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~ 319 (507)
|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|.+ ++++||++++.
T Consensus 271 GGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 349 (500)
T 2j6l_A 271 GGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQ 349 (500)
T ss_dssp CCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHH
T ss_pred CCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999987 78999999999
Q ss_pred HHHHHHHHHHHHhc-CCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCce
Q 010552 320 HFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 397 (507)
Q Consensus 320 ~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gls 397 (507)
+++++.++++++.+ |+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 350 ~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~ 429 (500)
T 2j6l_A 350 AVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLS 429 (500)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSE
T ss_pred HHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcE
Confidence 99999999999865 7899999975 346899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHH--hhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 398 AYFFSDDEQMKKEFV--QNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 398 a~i~t~d~~~~~~~~--~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
++|||+|.+++++++ +++++|+|+||++.. ...+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 430 a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 430 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp EEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred EEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 999999999999999 779999999998653 3456899999999999999999999999999999864
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=5.5e-97 Score=781.17 Aligned_cols=458 Identities=22% Similarity=0.360 Sum_probs=423.1
Q ss_pred ccceeeccCccccccccccCCCHHHHHHHHHHHHHHhH-hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 8 AFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
.++++.+|.||++++.+ +.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|+++++.|+|||..
T Consensus 32 ~~~~v~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 110 (501)
T 1uxt_A 32 QEIEVKSPIDLATIAKV-ISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKS 110 (501)
T ss_dssp CEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 56788999999999999 99999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCC--CCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY--PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 164 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~v 164 (507)
++. .|+..+++.++++++.++++.. +..+...... +...+++++|+|||++|+|||||+.+.++++++||++||+|
T Consensus 111 ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~V 188 (501)
T 1uxt_A 111 AAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAV 188 (501)
T ss_dssp HHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence 997 4999999999998887776532 2211110011 22568999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 165 VLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 165 VlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
|+|||+.+|+++.++++++.++ +|+|++|+|+|+.++++.|+.|+ +|+|+||||+.+|+.|++.++ +||+++||||
T Consensus 189 VlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGG 266 (501)
T 1uxt_A 189 VVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266 (501)
T ss_dssp EEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCC
T ss_pred EEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCC
Confidence 9999999999999999999999 99999999999558899999995 999999999999999999888 8999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++.++
T Consensus 267 k~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~ 345 (501)
T 1uxt_A 267 GDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAV 345 (501)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHH
T ss_pred cCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999987 7899999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCccCCCC-ceeecEEEEcCC---CCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQRDEKQ-LKIAPTILLDVP---DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~~~~g-~~~~Ptil~~~~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
+++.++++++.+ |+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 346 ~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 423 (501)
T 1uxt_A 346 DEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGL 423 (501)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCc
Confidence 999999999865 6799999976 58 999999999999 9999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCCCCCCCcC
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 475 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~ 475 (507)
++||||+|.+.++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+++++|++.|+|+.+. ....+++|
T Consensus 424 ~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~-~~~~~~~~ 500 (501)
T 1uxt_A 424 DAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY-KGKGVWKY 500 (501)
T ss_dssp EEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC-TTSSSSSC
T ss_pred EEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec-CCCccccc
Confidence 999999999999999999999999999874 345688999999999999999999999999999998864 33455555
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.9e-96 Score=775.25 Aligned_cols=453 Identities=21% Similarity=0.324 Sum_probs=400.8
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...+++..+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.
T Consensus 20 ~~~~~~~~~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 98 (485)
T 4dng_A 20 SGRTEDILNPYDQSVITTA-SLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTI 98 (485)
T ss_dssp SSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 3567889999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++.. |+..+++.+++++...+.. .+...+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 99 ~~a~~-ev~~~~~~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 175 (485)
T 4dng_A 99 IKSTI-ELEQTIAILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVV 175 (485)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEE
Confidence 99986 9999999999999887653 22221111 122456789999999999999999999999999999999999999
Q ss_pred EcCCCCChHHH-HHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecC
Q 010552 166 LKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG 241 (507)
Q Consensus 166 lKps~~~~~~~-~~l~~ll~~a-lp~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg 241 (507)
+|||+.+|+++ .++++++.++ +|+|+||+|+|+. +.++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++|||
T Consensus 176 lKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElG 255 (485)
T 4dng_A 176 HKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELG 255 (485)
T ss_dssp EECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcC
Confidence 99999999999 9999999999 9999999999954 5889999996 99999999999999999999999999999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHH
Q 010552 242 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFH 320 (507)
Q Consensus 242 G~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~ 320 (507)
||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+
T Consensus 256 Gk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 334 (485)
T 4dng_A 256 GNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQ 334 (485)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHH
T ss_pred CCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHH
Confidence 9999999999999999999999999 99999999999999999999999999999999999999986 778999999999
Q ss_pred HHHHHHHHHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 010552 321 FARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 399 (507)
Q Consensus 321 ~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~ 399 (507)
++++.++++++.+ |+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 335 ~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~ 412 (485)
T 4dng_A 335 IEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSA 412 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEE
Confidence 9999999999865 7899999976 689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 400 FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 400 i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|||+|.+.++++++++++|+|+||++..+ ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 413 v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 413 VFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp EECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999998753 5688999999999999999999999999999998865
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=3e-96 Score=772.66 Aligned_cols=445 Identities=23% Similarity=0.369 Sum_probs=417.9
Q ss_pred cceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 010552 9 FQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 88 (507)
Q Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 88 (507)
+++..+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+|||..++
T Consensus 19 ~~~~~~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 97 (475)
T 1euh_A 19 EIKIYEPASGAELGSV-PAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA 97 (475)
T ss_dssp EEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHH
T ss_pred ceEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 6788999999999999 899999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCC----Ccc-eEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCe
Q 010552 89 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYP----SSA-EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 163 (507)
Q Consensus 89 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 163 (507)
.. |+..+++.++++++..+++.... .+.. ..+ ... ++.++|+|||++|+|||||+.+.++++++||++||+
T Consensus 98 ~~-ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~ 173 (475)
T 1euh_A 98 VS-EVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNV 173 (475)
T ss_dssp HH-HHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCE
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCE
Confidence 64 99999999999999887765322 1111 123 355 899999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeec
Q 010552 164 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 240 (507)
||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|+|+||||+++|+.|++.++ +||+++|+
T Consensus 174 vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lEl 251 (475)
T 1euh_A 174 IAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLEL 251 (475)
T ss_dssp EEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEEC
T ss_pred EEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEc
Confidence 99999999999999999999999 999999999995 56899999996 999999999999999999887 89999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHH
Q 010552 241 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH 320 (507)
Q Consensus 241 gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~ 320 (507)
|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+
T Consensus 252 GGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~ 330 (475)
T 1euh_A 252 GGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKS 330 (475)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHH
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 010552 321 FARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 399 (507)
Q Consensus 321 ~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~ 399 (507)
++++.++++++.+ |+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 331 ~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~ 408 (475)
T 1euh_A 331 ADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQAS 408 (475)
T ss_dssp HHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEE
Confidence 9999999999864 6799999975 589999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEECC-CcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 400 FFSDDEQMKKEFVQNISAGGIVFND-TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 400 i~t~d~~~~~~~~~~l~~g~V~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
|||+|.+.++++++++++|+|+||+ +.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 409 v~t~d~~~~~~~~~~l~~G~v~vN~~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 409 IFTNDFPRAFGIAEQLEVGTVHINNKTQR--GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp EECSCHHHHHHHHHHSCSSEEEESSCCCC--CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred EEeCCHHHHHHHHHhCCEeeEEECCCCCC--CCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999999999999998 654 357899999999999999999999999999999875
No 38
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.8e-96 Score=773.03 Aligned_cols=446 Identities=24% Similarity=0.406 Sum_probs=398.8
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...++++.+|.||++++.+ +.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 21 ~~~~~~~~~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 99 (478)
T 3ty7_A 21 SNETIEVINPATEEVIGKV-AKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL 99 (478)
T ss_dssp SSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4567889999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++...|+..+++.++++++.++++.... .+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 100 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 171 (478)
T 3ty7_A 100 SLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVV 171 (478)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEE
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEE
Confidence 99955699999999999999888764422 1245788999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 242 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 242 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++|+||
T Consensus 172 lKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGG 251 (478)
T 3ty7_A 172 LKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGG 251 (478)
T ss_dssp EECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCC
T ss_pred EECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCC
Confidence 999999999999999999999 99999999999 668999999996 999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 243 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 243 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
|||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.++
T Consensus 252 k~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 330 (478)
T 3ty7_A 252 KSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQF 330 (478)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999987 7789999999999
Q ss_pred HHHHHHHHHHh-cCCeEEecCcc-C---CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 010552 322 ARLASLLDEDK-VSDKIVYGGQR-D---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 396 (507)
Q Consensus 322 ~~~~~~i~~a~-~~~~v~~gg~~-~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 396 (507)
+++.++++++. +|+++++||.. . ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 331 ~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL 410 (478)
T 3ty7_A 331 DQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGL 410 (478)
T ss_dssp HHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCS
T ss_pred HHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCc
Confidence 99999999985 48899999942 2 3689999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 010552 397 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 464 (507)
Q Consensus 397 sa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~ 464 (507)
+++|||+|.+.++++++++++|+|+||+ . ...+.+||||+|.||+|+++|.+|+++||+.|+|+.
T Consensus 411 ~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 411 AGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp EEEEECSCHHHHHHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEEEEET
T ss_pred eEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999999999999998 3 356789999999999999999999999999999873
No 39
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9.3e-96 Score=770.36 Aligned_cols=453 Identities=22% Similarity=0.320 Sum_probs=419.5
Q ss_pred ccccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 6 VRAFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
...+++..+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||.
T Consensus 19 ~~~~~~~~~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 97 (486)
T 1t90_A 19 TDQYEDVVNPATKEVLCQV-PISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNT 97 (486)
T ss_dssp CSCEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEEECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 3457889999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++. .|+..+++.+++++...+. ..++..+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 98 ~~a~-~ev~~~~~~~~~~a~~~~~-~~g~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV 173 (486)
T 1t90_A 98 KEAL-GEVGRGIENVEFAAGAPSL-MMGDSLAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFI 173 (486)
T ss_dssp HHHH-HHHHHHHHHHHHHTTHHHH-HCEEEEEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHH-hcCccccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEE
Confidence 9986 4999999999988754433 33222111 112345688999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCC
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGK 243 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 243 (507)
+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ +|+|+||||+.+|+.|++.+++++||+++|||||
T Consensus 174 lKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk 253 (486)
T 1t90_A 174 LKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAK 253 (486)
T ss_dssp EECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred EECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCC
Confidence 999999999999999999999 99999999999878899999997 9999999999999999999999999999999999
Q ss_pred CcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCE-EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHH
Q 010552 244 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY-IITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF 321 (507)
Q Consensus 244 ~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~ 321 (507)
||+||++|||++.|++.+++++| .|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+ ++++||++++.++
T Consensus 254 ~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~ 331 (486)
T 1t90_A 254 NHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNK 331 (486)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHH
Confidence 99999999999999999999999 999999999999 999999 9999999999999999999876 7789999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCccC--CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceE
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAA 398 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa 398 (507)
+++.++++++.+ |+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 332 ~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a 411 (486)
T 1t90_A 332 KRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGA 411 (486)
T ss_dssp HHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEE
Confidence 999999999854 78999999642 368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 010552 399 YFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 399 ~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~v~~~~ 466 (507)
||||+|.+.++++++++++|+|+||++. +...+.+||||+|.||+| +++|.+|+++|++.|+|+.++
T Consensus 412 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 412 CLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp EEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred EEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999864 234578999999999999 899999999999999998764
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=3.9e-94 Score=765.55 Aligned_cols=461 Identities=19% Similarity=0.232 Sum_probs=421.3
Q ss_pred cceeeccCc-cccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHcCCChh
Q 010552 9 FQDFSCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEK-EEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 9 ~~~~~~~~~-~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~ 86 (507)
.....+|.| +++|+.+ +.++.+|+++|+++|++|++.|+.+|.++|.++|++++++|+++ +++|+++++.|+||+..
T Consensus 78 ~~~~~~P~~~~~~i~~~-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ 156 (563)
T 4e3x_A 78 IQYQLSPFNHAHKVAKF-CYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVI 156 (563)
T ss_dssp EEEEEETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHH
T ss_pred ceeeeCCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHH
Confidence 345678998 7999999 89999999999999999999999999999999999999999999 99999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEE
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 166 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVl 166 (507)
++..+++..+++.+++++..++++...+.... ..+...+.++.|+|||++|+|||||+....+++++|| +||+||+
T Consensus 157 ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVl 232 (563)
T 4e3x_A 157 QAEIDAAAELIDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLW 232 (563)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEE
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEE
Confidence 99774499999999999999888765432211 1123355667788999999999999999999999999 6999999
Q ss_pred cCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCc------ee
Q 010552 167 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTP------VI 237 (507)
Q Consensus 167 Kps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~------~~ 237 (507)
|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +++|+||||+.+|+.|++.+++++|| ++
T Consensus 233 KPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~ 312 (563)
T 4e3x_A 233 KPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLA 312 (563)
T ss_dssp ECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEE
T ss_pred ECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCcee
Confidence 99999999999999999999 99999999999 456899999996 99999999999999999999999885 99
Q ss_pred eecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCC-CC-CCccccc
Q 010552 238 LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP-ME-SKDLSRI 315 (507)
Q Consensus 238 lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~-~~-~~~~gpl 315 (507)
+|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+| .+ .+++||+
T Consensus 313 lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpl 391 (563)
T 4e3x_A 313 GECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAV 391 (563)
T ss_dssp EECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCC
T ss_pred ccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCC
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999 76 7899999
Q ss_pred CCHHHHHHHHHHHHHHh--cCCeEEecCccC-CCCceeecEEEEcCCCCCCCcccccccceeeeEecCC--HHHHHHHH-
Q 010552 316 VNPFHFARLASLLDEDK--VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK--IEDSFDVI- 389 (507)
Q Consensus 316 ~~~~~~~~~~~~i~~a~--~~~~v~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~- 389 (507)
+++.+++++.++|++++ +|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++
T Consensus 392 i~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~an 471 (563)
T 4e3x_A 392 IDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVD 471 (563)
T ss_dssp SCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHH
Confidence 99999999999999997 367999999764 4799999999999999999999999999999999997 79999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcc--eeeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 010552 390 KSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 390 n~~~~glsa~i~t~d~~~~~~~~~~l~--~g~V~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|+++|||+++|||+|.+.+++++++++ +|+|+||+.+++...+.+||||+|.||+| +.+|.+++++|++.|+|...
T Consensus 472 n~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~- 550 (563)
T 4e3x_A 472 STTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET- 550 (563)
T ss_dssp HSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-
T ss_pred cCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-
Confidence 789999999999999999999999975 99999999876556788999999999998 89999999999999999875
Q ss_pred CCCCCCCcCC
Q 010552 467 FNGDSTTRYP 476 (507)
Q Consensus 467 ~~~~~~~~~~ 476 (507)
+..+..++||
T Consensus 551 ~~~~~~~~yp 560 (563)
T 4e3x_A 551 HKPLGDWRYS 560 (563)
T ss_dssp CSCCCCSSCT
T ss_pred CcCCCcccCC
Confidence 4445556664
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.4e-92 Score=745.07 Aligned_cols=444 Identities=20% Similarity=0.313 Sum_probs=412.9
Q ss_pred ccceeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh
Q 010552 8 AFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 87 (507)
Q Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 87 (507)
..++..+|.||++++.+ +.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+||+..+
T Consensus 20 ~~~~~~~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 98 (490)
T 3ju8_A 20 ETLESLDPVGQGVVWSG-RGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWE 98 (490)
T ss_dssp CEEEEECTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred CeEEEECCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 45677899999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEc
Q 010552 88 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 167 (507)
Q Consensus 88 a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlK 167 (507)
+.. |+..+++.+++++...+.+.+..... ..+....++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 99 a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 173 (490)
T 3ju8_A 99 SAT-EVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFK 173 (490)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEE
Confidence 975 99999999999998887765432111 1234567789999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCce-eeecCCCC
Q 010552 168 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPV-ILELGGKS 244 (507)
Q Consensus 168 ps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~-~lelgG~~ 244 (507)
||+.+|+++.++++++.++ +|+|++|+|+|+.+.++.|+.|+ +|+|+||||+++|+.|++.++++++|+ ++|+||||
T Consensus 174 ps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~ 253 (490)
T 3ju8_A 174 PSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNN 253 (490)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCE
T ss_pred CCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCC
Confidence 9999999999999999999 99999999999888999999996 999999999999999999999999998 89999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCc-hHHHHHHHHHHHhhhcCCC-CCC-CCcccccCCHHHH
Q 010552 245 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDSLRNELKEFFGKN-PME-SKDLSRIVNPFHF 321 (507)
Q Consensus 245 p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~L~~~~~~l~~g~-~~~-~~~~gpl~~~~~~ 321 (507)
|+||++|||++.|++.+++++| .|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+ .+++||++++.++
T Consensus 254 p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~ 332 (490)
T 3ju8_A 254 PLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAA 332 (490)
T ss_dssp EEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHH
Confidence 9999999999999999999999 9999999999999999996 9999999999999999998 776 7789999999999
Q ss_pred HHHHHHHHHHhc-CCeEEecCcc-CCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 010552 322 ARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 399 (507)
Q Consensus 322 ~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~ 399 (507)
+++.++++++.+ |+++++||.. +.+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 333 ~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~ 411 (490)
T 3ju8_A 333 EHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAG 411 (490)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEE
Confidence 999999999854 7899999865 3579999999999 999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 010552 400 FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 400 i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|||+|.++++++++++++|+|+||++.. ...+.+||||+|.||++ ++++|++.|+|++..
T Consensus 412 v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 412 LLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp EECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred EEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999765 34578999999999975 479999999998764
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.8e-91 Score=783.24 Aligned_cols=454 Identities=18% Similarity=0.274 Sum_probs=425.2
Q ss_pred cccceeeccCc-cccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 010552 7 RAFQDFSCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP 85 (507)
Q Consensus 7 ~~~~~~~~~~~-~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 85 (507)
....++.+|.| +++++.+ +.++.+|+++|+++|++|++.|+.+|.++|.++|++++++|++++++|+++++.|+||+.
T Consensus 544 ~~~~~v~nPa~~~~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~ 622 (1026)
T 4f9i_A 544 NDLIPTVNPNKPSEVLGQI-CQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQW 622 (1026)
T ss_dssp SCEEEEEETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCH
T ss_pred CCcEEEeCCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 45677899998 9999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEE
Q 010552 86 FETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 165 (507)
Q Consensus 86 ~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 165 (507)
.++.. |+..+++.+++++...+++........ ..+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 623 ~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVV 698 (1026)
T 4f9i_A 623 DQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVV 698 (1026)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred hhHHH-HHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEE
Confidence 99975 999999999999999888754432211 23456788999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHh------cccCce
Q 010552 166 LKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA------KHLTPV 236 (507)
Q Consensus 166 lKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~ 236 (507)
+|||+.+|+++..+++++.++ +|+|+||+|+| +.++++.|+.|+ |++|+||||+.+|+.|++.++ +++||+
T Consensus 699 lKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv 778 (1026)
T 4f9i_A 699 FKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKI 778 (1026)
T ss_dssp EECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEE
T ss_pred EEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccce
Confidence 999999999999999999999 99999999999 567899999997 999999999999999999998 578999
Q ss_pred eeecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCccccc
Q 010552 237 ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRI 315 (507)
Q Consensus 237 ~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl 315 (507)
++|+|||||+||++|||++.|++.+++|+| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||+
T Consensus 779 ~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpv 857 (1026)
T 4f9i_A 779 ISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAV 857 (1026)
T ss_dssp EEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCC
T ss_pred EEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccc
Confidence 999999999999999999999999999999 99999999999999999999999999999999999999987 7899999
Q ss_pred CCHHHHHHHHHHHHHHhcCCeEEecCccCCC-CceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 316 VNPFHFARLASLLDEDKVSDKIVYGGQRDEK-QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 316 ~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~-g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
+++.+++++.++|+++++.+++++||..+.. |+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 858 i~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~y 937 (1026)
T 4f9i_A 858 ADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQF 937 (1026)
T ss_dssp SSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSC
T ss_pred cCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCC
Confidence 9999999999999999765599999976544 999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 010552 395 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 395 glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~v~~~~ 466 (507)
||+++|||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|.+..
T Consensus 938 GLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 938 ALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp CSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999999999999999998766667889999999999995 68999999999999998864
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=4.8e-91 Score=742.56 Aligned_cols=452 Identities=16% Similarity=0.233 Sum_probs=405.5
Q ss_pred ccceeeccCccccccccccCCCHHHHHHHHHHHHHH-hHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 010552 8 AFQDFSCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 86 (507)
Q Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 86 (507)
..+++.+|.||++++.+ +.++ +|+++++++|++| |+.|+.+|.++|.++|++++++|++++++|++++++|+|||..
T Consensus 22 ~~~~v~nP~tg~~i~~~-~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 99 (534)
T 2y53_A 22 AGITLTDPVTGVALVRV-SSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRN 99 (534)
T ss_dssp SCEEEECTTTCCEEEEE-CCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CeEEEECCCCCCEEEEE-eCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 46788999999999999 7877 8999999999999 5999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcCCCc--ccc--cccCCCC-cceEEeecc-EEEEEEecCccchhhhhhHHHHHHHh
Q 010552 87 ETFISEISMTKSSCKLALKELKYWTKPEK--AKT--SLTTYPS-SAEIISEPL-GVVLVISTWNYPFLLSLDPVIGAIAA 160 (507)
Q Consensus 87 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~ALaa 160 (507)
++.. |+..+++.+++++...++...... .+. +....+. ..+..++|+ |||++|+|||||++++++++++||++
T Consensus 100 ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaa 178 (534)
T 2y53_A 100 DSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS 178 (534)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHc
Confidence 9975 999999999999887765432110 000 1111111 357889997 99999999999999999999999999
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhc--CCCeEEEeCChHHHHHHHHHHh--cccC
Q 010552 161 GNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA--KHLT 234 (507)
Q Consensus 161 GN~vVlKps~~~~~~~~~l~~ll~~a--lp~g~v~~v~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~i~~~a~--~~~~ 234 (507)
||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+.. .+..+ .+|+|+||||+.+|+.|++.++ +++|
T Consensus 179 GN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k 255 (534)
T 2y53_A 179 GVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGA 255 (534)
T ss_dssp TCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCC
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCC
Confidence 99999999999999999999999997 59999999999432 24444 4899999999999999998875 8899
Q ss_pred ceeeecCCCCcEEEcCCC-----CHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-
Q 010552 235 PVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 308 (507)
Q Consensus 235 ~~~lelgG~~p~iV~~da-----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~- 308 (507)
|+++|||||||+||++|| |++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 256 ~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~ 334 (534)
T 2y53_A 256 RLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRND 334 (534)
T ss_dssp EEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTST
T ss_pred cEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcC
Confidence 999999999999999999 99999999999999 99999999999999999999999999999999999999987
Q ss_pred CCcccccCCHHHHHHHHHHHHHHhcCCeEEecCccC-------CCCceeecEEEEcCCCC--CCCcccccccceeeeEec
Q 010552 309 SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLDVPDD--STIMKEEIFGPLLPIVTV 379 (507)
Q Consensus 309 ~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~g~~~~Ptil~~~~~~--~~i~~eE~fgPvl~v~~~ 379 (507)
++++||++++.+++++.++|+++.+|+++++||... ..|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 335 ~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~ 414 (534)
T 2y53_A 335 AVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPY 414 (534)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEE
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEE
Confidence 789999999999999999999996688999998642 35899999999999987 699999999999999999
Q ss_pred C---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeeEEECCCccc-------CCCCCCCcccCCCC
Q 010552 380 E---KI-----EDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI--SAGGIVFNDTIVH-------TTVSSLPFGGVGES 442 (507)
Q Consensus 380 ~---~~-----~eai~~~n~~~~glsa~i~t~d~~~~~~~~~~l--~~g~V~iN~~~~~-------~~~~~~pfGG~~~S 442 (507)
+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..+ ...+.+||||+|.|
T Consensus 415 ~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~S 494 (534)
T 2y53_A 415 RVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRA 494 (534)
T ss_dssp CCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGG
T ss_pred CCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccC
Confidence 9 99 999999999999999999999999999999999 8999999986421 23578999999999
Q ss_pred CCCCc-chHHHHHHhhhccEEEEec
Q 010552 443 GMGSY-HGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 443 G~G~~-~g~~~~~~~~~~k~v~~~~ 466 (507)
|+|++ +|.+++++|++.|+|...+
T Consensus 495 G~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 495 GGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp CSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred CCCCCcchHHHHHHHhhhheeecCH
Confidence 99999 6999999999999987643
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.5e-88 Score=719.61 Aligned_cols=446 Identities=19% Similarity=0.223 Sum_probs=400.0
Q ss_pred CccccccceeeccCccccc-cccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 010552 3 NPSVRAFQDFSCSATMAAE-EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL 81 (507)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 81 (507)
+|+...+++..+|.||+++ +.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+
T Consensus 2 ~~~~~~~~~~~nP~tg~~i~~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 2 NPQTDNVFYATNAFTGEALPLAF-PVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp ---CCCEEEEECTTTSSEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCCeEEeECCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 3556678899999999999 698 89999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhh--hcCCCcccc-ccc-CCC-CcceEEeeccEEEEEEecCccchhhhh--hHH
Q 010552 82 SKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKT-SLT-TYP-SSAEIISEPLGVVLVISTWNYPFLLSL--DPV 154 (507)
Q Consensus 82 Gk~~~~a~~~ev~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~ 154 (507)
|||..++.. |+..+++.++++++.+++ |........ +.. ..+ ...+++++|+|||++|+|||||+.+++ +++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999988865 999999999999998876 543221000 000 011 235789999999999999999999854 999
Q ss_pred HHHHHhCCeEEEcCCCCChHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHH
Q 010552 155 IGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMA 227 (507)
Q Consensus 155 ~~ALaaGN~vVlKps~~~~~~~~~l~~ll~----~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~ 227 (507)
++||++||+||+|||+.+|+++.++++++. ++ +|+|+||+|+| +.++++.|++|+ ||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 999999999999999999999999999985 45 89999999999 778899999997 999999999999999999
Q ss_pred HHhccc--CceeeecCCCCcEEEcCCCCHH--HHHHHHHHHhhhcCCCCccccCCEEEEeCC-chHHHHHHHHHHHhhhc
Q 010552 228 AAAKHL--TPVILELGGKSPAVVDSTINLQ--VTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFF 302 (507)
Q Consensus 228 ~a~~~~--~~~~lelgG~~p~iV~~daDl~--~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~l~ 302 (507)
.+++++ ||+++|||||||+||++|||++ .|++.+++++| .|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred HhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 999986 9999999999999999999999 99999999999 999999999999999999 99999999999999887
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHhc--CCeEEecCccCCCCceeecEEEEcCCCC---CCCcccccccceeeeE
Q 010552 303 GKNPMESKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIFGPLLPIV 377 (507)
Q Consensus 303 ~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~--~~~v~~gg~~~~~g~~~~Ptil~~~~~~---~~i~~eE~fgPvl~v~ 377 (507)
.||++++.+.+++.++++++.+ |+++++||. +|+|++|||+.+++++ |++++||+||||++|+
T Consensus 319 ---------~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~ 386 (510)
T 1ez0_A 319 ---------PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIV 386 (510)
T ss_dssp ---------CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEE
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEE
Confidence 3688999999999999998863 679999997 3999999999988877 9999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhhc--ceeeEEECCCcccC-CCCCCCccc-CCCCCCCCc--ch
Q 010552 378 TVEKIEDSFDVIKSKPKPLAAYFFSDDE--QMKKEFVQNI--SAGGIVFNDTIVHT-TVSSLPFGG-VGESGMGSY--HG 449 (507)
Q Consensus 378 ~~~~~~eai~~~n~~~~glsa~i~t~d~--~~~~~~~~~l--~~g~V~iN~~~~~~-~~~~~pfGG-~~~SG~G~~--~g 449 (507)
+|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++..+. ..+.+|||| ++.||+|+. +|
T Consensus 387 ~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G 466 (510)
T 1ez0_A 387 VCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVG 466 (510)
T ss_dssp EESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSS
T ss_pred EeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCcc
Confidence 9999999999999999999999999987 7999999999 79999999875422 346899999 788999854 89
Q ss_pred HHHHHHhhhccEEE
Q 010552 450 KFSFDAFSHKKAVL 463 (507)
Q Consensus 450 ~~~~~~~~~~k~v~ 463 (507)
.+|+++|++.|++.
T Consensus 467 ~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 467 AEAIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGGGEEEEEEE
T ss_pred HHHHHHhheEEEEc
Confidence 99999999988764
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-88 Score=721.57 Aligned_cols=440 Identities=19% Similarity=0.207 Sum_probs=398.8
Q ss_pred eeccCcccccc-ccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhH
Q 010552 12 FSCSATMAAEE-KQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI 90 (507)
Q Consensus 12 ~~~~~~~~~i~-~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 90 (507)
+.+|.||++++ .+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+..++..
T Consensus 44 v~nP~tg~~i~~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 122 (528)
T 3v4c_A 44 TFASAPAHGPAHDF-AVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG 122 (528)
T ss_dssp EEECCCSSSCCCEE-ECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH
T ss_pred ccCCCCCCEeeeEe-CCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Confidence 67999999998 88 89999999999999999999999999999999999999999999999999999999999999875
Q ss_pred HHHHHHHHHHHHHHHHHhh--hcCCCcc---cccccCCCCcceEEeeccEEEEEEecCccchhhhh--hHHHHHHHhCCe
Q 010552 91 SEISMTKSSCKLALKELKY--WTKPEKA---KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNA 163 (507)
Q Consensus 91 ~ev~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~ALaaGN~ 163 (507)
|+..+++.++++++.+++ +...... +......+...+++++|+|||++|+|||||+.+.+ +++++||++||+
T Consensus 123 -ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~ 201 (528)
T 3v4c_A 123 -ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201 (528)
T ss_dssp -HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCC
T ss_pred -HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCE
Confidence 999999999999998876 3332211 00001123456889999999999999999999865 899999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhccc--C
Q 010552 164 VVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL--T 234 (507)
Q Consensus 164 vVlKps~~~~~~~~~l~~ll~----~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~ 234 (507)
||+|||+.+|+++.++++++. ++ +|+|+||+|+| +.+.++.|+.|+ ||+|+||||+.+|+.|++.+++++ |
T Consensus 202 VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 281 (528)
T 3v4c_A 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPI 281 (528)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCC
T ss_pred EEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCC
Confidence 999999999999999999865 45 99999999999 678999999996 999999999999999999999999 9
Q ss_pred ceeeecCCCCcEEEcCCC---CHHHHHHHHHHHhhhcCCCCccccCCEEEEeCC-chHHHHHHHHHHHhhhcCCCCCCCC
Q 010552 235 PVILELGGKSPAVVDSTI---NLQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESK 310 (507)
Q Consensus 235 ~~~lelgG~~p~iV~~da---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~l~~g~~~~~~ 310 (507)
|+++|||||||+||++|| |++.|++.+++++| .|+||.|++++|||||++ ++|+|+++|++++++++.+ +
T Consensus 282 pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~ 355 (528)
T 3v4c_A 282 PFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----T 355 (528)
T ss_dssp CEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----E
T ss_pred ceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----C
Confidence 999999999999999999 88999999999999 999999999999999998 9999999999999988643 4
Q ss_pred cccccCCHHHHHHHHHHHHHHhcCCeEEecCccCCCCceeecEEEEcCCCC---CCCcccccccceeeeEecCCHHHHHH
Q 010552 311 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIFGPLLPIVTVEKIEDSFD 387 (507)
Q Consensus 311 ~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~ 387 (507)
.+||++++.+.+++.++++ .+|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+
T Consensus 356 ~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~ 431 (528)
T 3v4c_A 356 MLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEE 431 (528)
T ss_dssp CSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHH
Confidence 6899999888888887764 357899999975 6999999999988887 89999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC--CHHHHHHHHhhcc--eeeEEECCCccc-CCCCCCCccc-CCCCCCCCcc--hHHHHHHhhhc
Q 010552 388 VIKSKPKPLAAYFFSD--DEQMKKEFVQNIS--AGGIVFNDTIVH-TTVSSLPFGG-VGESGMGSYH--GKFSFDAFSHK 459 (507)
Q Consensus 388 ~~n~~~~glsa~i~t~--d~~~~~~~~~~l~--~g~V~iN~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~~~~~~~~ 459 (507)
++|+++|||+++|||+ |.+++++++++++ +|+|+||++++. ...+.+|||| +|.||+|+++ |++|+++|++.
T Consensus 432 ~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~ 511 (528)
T 3v4c_A 432 LARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRP 511 (528)
T ss_dssp HHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEE
T ss_pred HHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchh
Confidence 9999999999999999 8999999999998 999999996542 2468899999 9999999986 99999999999
Q ss_pred cEEE
Q 010552 460 KAVL 463 (507)
Q Consensus 460 k~v~ 463 (507)
|++.
T Consensus 512 k~~q 515 (528)
T 3v4c_A 512 VAYQ 515 (528)
T ss_dssp EEEE
T ss_pred HHhh
Confidence 8753
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.9e-87 Score=749.23 Aligned_cols=434 Identities=21% Similarity=0.352 Sum_probs=403.4
Q ss_pred cCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 010552 26 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 105 (507)
Q Consensus 26 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~ 105 (507)
+.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+..++.. |+..+++.+++++.
T Consensus 545 ~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 545 ADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999975 99999999999999
Q ss_pred HHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHHHHHHHHhh
Q 010552 106 ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED 185 (507)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~ll~~ 185 (507)
..+++...... .+ ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 624 ~a~~~~g~~~~-~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~e 701 (1001)
T 3haz_A 624 QGRKLFGSETA-MP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHE 701 (1001)
T ss_dssp HHHHHHSSCEE-CC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHhhcCcccc-cc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHH
Confidence 88876542211 11 12345678899999999999999999999999999999999999999999999999999999999
Q ss_pred h-cCCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCCCcEEEcCCCCHHHHHHH
Q 010552 186 Y-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRR 260 (507)
Q Consensus 186 a-lp~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~daDl~~aa~~ 260 (507)
+ +|+|+||+|+|+.+.+..|+.|+ ||+|+||||+.+|+.|++.++++ +||+++|+|||||+||++|||++.|++.
T Consensus 702 AGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~ 781 (1001)
T 3haz_A 702 AGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADD 781 (1001)
T ss_dssp HTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred hCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHH
Confidence 8 99999999999555599999997 99999999999999999998864 8999999999999999999999999999
Q ss_pred HHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHhcCCeEEe
Q 010552 261 IIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVY 339 (507)
Q Consensus 261 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~ 339 (507)
+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++|+++.+++++ +
T Consensus 782 iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-~ 859 (1001)
T 3haz_A 782 VVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-H 859 (1001)
T ss_dssp HHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-E
T ss_pred HHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-e
Confidence 999999 99999999999999999999999999999999999999987 78999999999999999999998766688 8
Q ss_pred cCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcce
Q 010552 340 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 417 (507)
Q Consensus 340 gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~glsa~i~t~d~~~~~~~~~~l~~ 417 (507)
||..+..|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+.++++++++++
T Consensus 860 gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~a 937 (1001)
T 3haz_A 860 FAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV 937 (1001)
T ss_dssp EECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCC
T ss_pred ccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence 887766799999999974 6888999999999999999996 799999999999999999999999999999999999
Q ss_pred eeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 010552 418 GGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 418 g~V~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~ 466 (507)
|+|+||+++.+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 938 G~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp SEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred eeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999999876666678999999999999 568899999999999998865
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-82 Score=663.84 Aligned_cols=416 Identities=19% Similarity=0.207 Sum_probs=334.9
Q ss_pred eeeccCccccccccccCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CC
Q 010552 11 DFSCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL-------SK 83 (507)
Q Consensus 11 ~~~~~~~~~~i~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk 83 (507)
+..+|.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+ ||
T Consensus 10 ~~~~P~tg~~~~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk 88 (463)
T 2h5g_A 10 GVDLGTENLYFQSM-VKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred CCcCCCCCCEEEEe-cCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence 56899999999999 99999999999999999999999999999999999999999999999999999999 69
Q ss_pred Chh----hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHH
Q 010552 84 PPF----ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 159 (507)
Q Consensus 84 ~~~----~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALa 159 (507)
|.. ++. .|+..+++.+++++..++++.+.. .+......+...++.++|+|||++|+||| |.+.+ +++++||+
T Consensus 89 ~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 89 PLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred chhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 987 454 599999999999998877765432 11110012335688999999999999887 87777 89999999
Q ss_pred hCCeEEEcCCCCChHHHHHHHHHHhhhc----CCCcEEEEeCChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccC
Q 010552 160 AGNAVVLKPSEIAPATSSLLAKLLEDYV----DNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLT 234 (507)
Q Consensus 160 aGN~vVlKps~~~~~~~~~l~~ll~~al----p~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~ 234 (507)
+||+||+|||+.+|+++..|++++.+++ |+|+||+|+|+.++++.|+.|+ +|+|+||||+.+|+.|++.++ +|
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999986 5999999999667899999997 999999999999999999888 89
Q ss_pred ceeeecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccc
Q 010552 235 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 314 (507)
Q Consensus 235 ~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gp 314 (507)
|+++|||||||+||++|||++.|++.+++++| .| ||.|++++|||||++++| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hH
Confidence 99999999999999999999999999999999 98 999999999999999998 23
Q ss_pred cCCHHHHHHHHHHHHHHh-cCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC
Q 010552 315 IVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 393 (507)
Q Consensus 315 l~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 393 (507)
+ ++ ++++++. +|++++.|+.....|+|+ +++|++++||+||||++|++|+|+||||+++|+++
T Consensus 297 ~-----~~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~ 360 (463)
T 2h5g_A 297 L-----FD---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYG 360 (463)
T ss_dssp H-----HH---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHC
T ss_pred H-----HH---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCC
Confidence 2 22 3456554 467887554432335443 57899999999999999999999999999999999
Q ss_pred CCceEEEecCCHHHHHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEEEecCCC
Q 010552 394 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SY--HGKFSFDAFSHKKAVLYRSFNG 469 (507)
Q Consensus 394 ~glsa~i~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~~~~~~~~k~v~~~~~~~ 469 (507)
|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|.+|+++|++.|+|+++..
T Consensus 361 ~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~-- 436 (463)
T 2h5g_A 361 SSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD-- 436 (463)
T ss_dssp CSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS--
T ss_pred CCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC--
Confidence 9999999999999999999999999999998764 4678999999999999 76 89999999999999988652
Q ss_pred CCCCcCCCCcHHH
Q 010552 470 DSTTRYPPYTAEK 482 (507)
Q Consensus 470 ~~~~~~~p~~~~~ 482 (507)
..+ |||+..+
T Consensus 437 --~~r-~~y~~~~ 446 (463)
T 2h5g_A 437 --HVV-SDFSEHG 446 (463)
T ss_dssp --CCG-GGGSTTS
T ss_pred --ccc-CCccccc
Confidence 344 6777543
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=5.5e-81 Score=653.25 Aligned_cols=405 Identities=18% Similarity=0.224 Sum_probs=326.1
Q ss_pred HHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhHHHHHH-HHHHHHHHHHH
Q 010552 32 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFISEISM-TKSSCKLALKE 106 (507)
Q Consensus 32 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~~~~~~~~ 106 (507)
.+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||. .++...|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999998 7876458888 88999999998
Q ss_pred HhhhcCCCc--ccc-ccc--CCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHHHHHH
Q 010552 107 LKYWTKPEK--AKT-SLT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 181 (507)
Q Consensus 107 ~~~~~~~~~--~~~-~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~ 181 (507)
++++..... ... +.. ..+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 888764321 010 100 12345688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHh----h----h-cCCCcEEEEeCCh-HhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 010552 182 LLE----D----Y-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 250 (507)
Q Consensus 182 ll~----~----a-lp~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 250 (507)
++. + + +|+|+||+|+ +. ++++.|+.|+ +|+|+||||+++|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 54 6788999997 99999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 010552 251 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 327 (507)
Q Consensus 251 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~---g~~~~~~~~gpl~~~~~~~~~~~~ 327 (507)
|||++.|++.+++++| .|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999986 66421 344
Q ss_pred -HHHHhcCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecCCHH
Q 010552 328 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ 406 (507)
Q Consensus 328 -i~~a~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t~d~~ 406 (507)
++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 55554 3567775 4 689987 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCcccCCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEEEecCCCCCCCcCCCCcH
Q 010552 407 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFG-----GVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTA 480 (507)
Q Consensus 407 ~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p~~~ 480 (507)
.++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |++|+++|++.|+|+... ...+ |||+.
T Consensus 379 ~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~----~~~r-~py~~ 449 (468)
T 1vlu_A 379 NAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD----GQVA-SDYLG 449 (468)
T ss_dssp HHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECS----SCCS-CCC--
T ss_pred HHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC----CCcC-ccccc
Confidence 999999999999999998764 35778999 9999999999 999999999999998764 2344 78984
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-79 Score=643.35 Aligned_cols=412 Identities=16% Similarity=0.215 Sum_probs=360.6
Q ss_pred cCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 010552 26 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 105 (507)
Q Consensus 26 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~ 105 (507)
+.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++..+.....+.
T Consensus 7 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~------ 80 (464)
T 3k9d_A 7 DLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKH------ 80 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH------
Confidence 45688999999999999999999999999999999999999999999999999999999988764444333332
Q ss_pred HHhhhcCCCcc-cccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHHHHHHH--
Q 010552 106 ELKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-- 182 (507)
Q Consensus 106 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~l-- 182 (507)
+..+.+.... .......+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 -~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 81 -VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp -HHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred -HHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 3333332211 111112456778899999999999999999999999999999999999999999999999886655
Q ss_pred --Hhhh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecC-CCCcEEEcCCCCHHH
Q 010552 183 --LEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG-GKSPAVVDSTINLQV 256 (507)
Q Consensus 183 --l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~p~iV~~daDl~~ 256 (507)
+.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+. +++.+++++||+ +|+| ||+|+||++|||++.
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5677 99999999999 688999999996 99999999997 456678899999 7888 999999999999999
Q ss_pred HHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHH-------hhhcCCCCC-C-CCcccccCCHHHHHHHHHH
Q 010552 257 TTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-------KEFFGKNPM-E-SKDLSRIVNPFHFARLASL 327 (507)
Q Consensus 257 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~-------~~l~~g~~~-~-~~~~gpl~~~~~~~~~~~~ 327 (507)
|++.+++|+| +|+||.|++++|||||+++||+|+++|+++. +.+++|+|. + ++++||+++.++++++.++
T Consensus 235 Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 235 AVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999986 345667764 3 6789999999999999999
Q ss_pred HHHHhc-CCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHH----HHHhcCCCCceEEEec
Q 010552 328 LDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSF----DVIKSKPKPLAAYFFS 402 (507)
Q Consensus 328 i~~a~~-~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~glsa~i~t 402 (507)
++.+.. |+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|+++|||+++|||
T Consensus 314 ~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp TTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred hhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 988754 6799999853 567788865 89999999999999999997 7999999999999999
Q ss_pred CCHHHHHHHHhhcceeeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 010552 403 DDEQMKKEFVQNISAGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 465 (507)
Q Consensus 403 ~d~~~~~~~~~~l~~g~V~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 465 (507)
+|.+.+++|++++++|+|+||+++.+ ...+.+|||| +.+|.|+++|+.|+++|++.|+|.+.
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999998753 2568899998 78999999999999999999999764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=9.2e-77 Score=618.95 Aligned_cols=389 Identities=18% Similarity=0.240 Sum_probs=323.1
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhHH-------HHHHHHH
Q 010552 30 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFIS-------EISMTKS 98 (507)
Q Consensus 30 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ev~~~~~ 98 (507)
.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+. .++... |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 355432 5666666
Q ss_pred HHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHHH
Q 010552 99 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 178 (507)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~ 178 (507)
.++++....+. . ....+......+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 66665443221 0 11111100123456789999999999999998 8 6889999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 010552 179 LAKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 250 (507)
Q Consensus 179 l~~ll----~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 250 (507)
+++++ .++ +|+|+||+|+| +.+ .++.|..|+ +|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 554 667777786 99999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 010552 251 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 327 (507)
Q Consensus 251 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~---g~~~~~~~~gpl~~~~~~~~~~~~ 327 (507)
|||++.|++.+++++| .|+| .|++++|||||++++|+|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHH
Confidence 9999999999999999 9999 9999999999999999999999999999876 5541 2456
Q ss_pred HHHHhcCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010552 328 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQM 407 (507)
Q Consensus 328 i~~a~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t~d~~~ 407 (507)
++++.. | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 665421 2 11 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEec
Q 010552 408 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 408 ~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~~ 466 (507)
++++++++++|+|+||+++. ..+.+||||.+.||+| +++|++|+++||+.|+|++..
T Consensus 379 a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999865 3578999999999998 688999999999999998765
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.4e-76 Score=614.53 Aligned_cols=388 Identities=18% Similarity=0.270 Sum_probs=332.5
Q ss_pred CHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhH-------HHHHHHH
Q 010552 29 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTK 97 (507)
Q Consensus 29 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~~~ 97 (507)
..+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+. .++.. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999999999885 55532 3777777
Q ss_pred HHHHHHHHHHhhhcCCCcccccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHH
Q 010552 98 SSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 177 (507)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~ 177 (507)
+.+++++...+. . ....+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++.
T Consensus 92 ~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-V-GEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-c-CccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 777776653321 1 11111000012345688999999999999885 5789999999999999999999999999999
Q ss_pred HHHHHHh----hh-cCCCcEEEEeC-ChH-hHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 010552 178 LLAKLLE----DY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 249 (507)
Q Consensus 178 ~l~~ll~----~a-lp~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~ 249 (507)
++++++. ++ +|+|++|+|+| +.+ .++.|..|+ +|+|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 9999998 45 89999999998 544 677777786 99999999999999999887 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010552 250 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 329 (507)
Q Consensus 250 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 329 (507)
+|||++.|++.+++++| .|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 99999999999999999 9999 99999999999999999999999999987531
Q ss_pred HHhcCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010552 330 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKK 409 (507)
Q Consensus 330 ~a~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t~d~~~~~ 409 (507)
+.||... .+ |+ ||| ++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 298 --------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 --------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp --------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred --------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 1233211 12 33 886 3457889999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEec
Q 010552 410 EFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYRS 466 (507)
Q Consensus 410 ~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~~ 466 (507)
++++++++|+|+||++.. ..+.+||||.+.||+| +++|++|+++|++.|+|++.+
T Consensus 364 ~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999998764 4678999999999997 467999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1e-75 Score=612.85 Aligned_cols=405 Identities=17% Similarity=0.212 Sum_probs=336.1
Q ss_pred cCCCHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 010552 26 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 105 (507)
Q Consensus 26 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~ 105 (507)
+.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++..|+..+.+.+.
T Consensus 2 ~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~---- 77 (452)
T 3my7_A 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY---- 77 (452)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----
Confidence 6789999999999999999999999999999999999999999999999999999999999987546554444432
Q ss_pred HHhhhcCCCccc-ccccCCCCcceEEeeccEEEEEEecCccchhhhhhHHHHHHHhCCeEEEcCCCCChHHHHHHHHHHh
Q 010552 106 ELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 184 (507)
Q Consensus 106 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~ll~ 184 (507)
++....... ......+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.
T Consensus 78 ---~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~ 154 (452)
T 3my7_A 78 ---NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVL 154 (452)
T ss_dssp ---HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred ---HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHH
Confidence 222222111 1111223457889999999999999999999999999999999999999999999999999998876
Q ss_pred ----hh-cCCCcEEEEeC-ChHhHHHHHhcC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHH
Q 010552 185 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 257 (507)
Q Consensus 185 ----~a-lp~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~a 257 (507)
++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+.++ +.+++++||+++|+|||+|+||++|||++.|
T Consensus 155 ~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 155 DAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 56 99999999999 778999999996 9999999999854 4567789999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHhc-CCe
Q 010552 258 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDK 336 (507)
Q Consensus 258 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~ 336 (507)
++.+++++| +|+||.|+++++||||+++||+|+++|+++ +||++++.+.+++.++++++.. +++
T Consensus 231 a~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999 999999999999999999999999999875 4899999999999999986543 455
Q ss_pred EEecCccC----CCCceeecEE-------EEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC----CCceEEEe
Q 010552 337 IVYGGQRD----EKQLKIAPTI-------LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP----KPLAAYFF 401 (507)
Q Consensus 337 v~~gg~~~----~~g~~~~Pti-------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~glsa~i~ 401 (507)
+ +||... ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 5 476532 3589999997 668889999876 89999999999999999999999974 99999999
Q ss_pred cCCHHHHHH---HHhhcceeeEEECCCcccCCCCCCCcccCCC-----------CCCCCcc-----hHHHHHHhhhccEE
Q 010552 402 SDDEQMKKE---FVQNISAGGIVFNDTIVHTTVSSLPFGGVGE-----------SGMGSYH-----GKFSFDAFSHKKAV 462 (507)
Q Consensus 402 t~d~~~~~~---~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~~-----------SG~G~~~-----g~~~~~~~~~~k~v 462 (507)
|+|.+.+++ +++++++|+|+||+++. |||.+. -|+|.++ ++.+.++|.+.|+|
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~--------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v 445 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTT--------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTV 445 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC------------------------------------CCCCCGGGGEEEEEE
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCC--------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEE
Confidence 999887777 99999999999998753 444432 1555544 44677888888888
Q ss_pred EEec
Q 010552 463 LYRS 466 (507)
Q Consensus 463 ~~~~ 466 (507)
..+.
T Consensus 446 ~~~~ 449 (452)
T 3my7_A 446 AKRA 449 (452)
T ss_dssp ECCC
T ss_pred Eeec
Confidence 7543
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.36 E-value=0.14 Score=51.00 Aligned_cols=334 Identities=14% Similarity=0.179 Sum_probs=177.3
Q ss_pred HhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-C------hhhhhHHHHHHH--------HHHHHHHHHHHhh
Q 010552 45 NSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK-P------PFETFISEISMT--------KSSCKLALKELKY 109 (507)
Q Consensus 45 ~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~------~~~a~~~ev~~~--------~~~~~~~~~~~~~ 109 (507)
..++..+.++-.+..+.+.+.++++.|+=....++...+ . +.-. ..|+..+ .+.++...++++.
T Consensus 25 l~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I~~ 103 (423)
T 4gic_A 25 LAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERIRA 103 (423)
T ss_dssp HCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred hcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 344555555666667777777777766644444443221 1 1101 1132222 1233444444444
Q ss_pred hcCCCccccc-c-cCCCCcceEEeeccEEEEEEecCc---cchhhhhhHHHHHHHhCCe--EEEcCCCC---ChHHHHHH
Q 010552 110 WTKPEKAKTS-L-TTYPSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNA--VVLKPSEI---APATSSLL 179 (507)
Q Consensus 110 ~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~ALaaGN~--vVlKps~~---~~~~~~~l 179 (507)
+.+.+..... . ...|.....++.|+--|++..|.- || ++.+..++||-.+|.. |++-|.+. .|.+ ...
T Consensus 104 fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~i-L~A 181 (423)
T 4gic_A 104 YAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALV-LAA 181 (423)
T ss_dssp HHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHH-HHH
T ss_pred HHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHH-HHH
Confidence 4332322111 1 124556778899999999999944 65 3445568899999986 34445432 2222 112
Q ss_pred HHHHhhhcCCCcEEEEe-CChHhHHHHH---hc--CCCeEEEeCChHHHHHHHHHHhcccCceeeec-CCCCcEEE--cC
Q 010552 180 AKLLEDYVDNSAVRVVE-GAVAETSALL---EQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILEL-GGKSPAVV--DS 250 (507)
Q Consensus 180 ~~ll~~alp~g~v~~v~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~p~iV--~~ 250 (507)
++++ |+=.+.. |+.+...+|. +. +||+|+=.|+.-+..+=.. .. ..|-..+ .|.+=++| |+
T Consensus 182 A~l~------Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~-v~---g~VgIDm~AGPSEilViAD~ 251 (423)
T 4gic_A 182 AYIS------GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKL-VF---GQVGIDMVAGPSEILVISDG 251 (423)
T ss_dssp HHHH------TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HB---TTBEECCCCCCCEEEEEECS
T ss_pred HHhc------CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHH-hc---CCcCcccccccceEEEEeCC
Confidence 2222 3333333 4555555554 22 3999998887644321111 11 1222222 35554333 66
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010552 251 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDE 330 (507)
Q Consensus 251 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~~~~~~~~i~~ 330 (507)
++|.+..+..++.-+= ... ..+.++|..+ ++|.++..+++.+....-| . .+...+.+++
T Consensus 252 ~a~p~~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~l~----------r---~~i~~~sl~~ 310 (423)
T 4gic_A 252 RTDPDWIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPGME----------R---AEVIRTSLER 310 (423)
T ss_dssp CSCHHHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGGCT----------T---HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhhCc----------c---HHHHHHHHhc
Confidence 7999999988887775 221 1235677666 5566666655554321101 1 1122222221
Q ss_pred HhcCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 010552 331 DKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKE 410 (507)
Q Consensus 331 a~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t~d~~~~~~ 410 (507)
+| .++.++|++|+++++|..-.= -.-|.++|+. .
T Consensus 311 ---------------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~ 344 (423)
T 4gic_A 311 ---------------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---V 344 (423)
T ss_dssp ---------------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---H
T ss_pred ---------------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---H
Confidence 11 345679999999999995433 4677888875 4
Q ss_pred HHhhc-ceeeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 010552 411 FVQNI-SAGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 463 (507)
Q Consensus 411 ~~~~l-~~g~V~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~ 463 (507)
+..++ .+|.|++..++.- ..++-+| .+|+.|+.+..+...|...-++.
T Consensus 345 ~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLP-----T~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 345 LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLP-----TSGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp HGGGCCCCSEEEEC----------------CCC-----CTTGGGTCCCCCGGGGEEEEEEE
T ss_pred HHhhCcEeceeecCCCCchhhhhcCcCCCccCC-----CCCcccccCCCCHHHeeeeeeEE
Confidence 66666 4899999875421 1122233 35667777777888888766654
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.86 E-value=0.45 Score=47.59 Aligned_cols=328 Identities=17% Similarity=0.219 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhHHHHHHH--------HHHHHHHHHHHhhhcCCCcccc-c
Q 010552 53 EWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFISEISMT--------KSSCKLALKELKYWTKPEKAKT-S 119 (507)
Q Consensus 53 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~~--------~~~~~~~~~~~~~~~~~~~~~~-~ 119 (507)
.+-.+..+.+.+.++++.|+=....++...+-. .-. ..|+..+ .+.++...++++.+.+.+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 344555666666677776665554444432211 111 1133222 2344445555555544443221 1
Q ss_pred c-cCCCCcceEEeeccEEEEEEecC---ccchhhhhhHHHHHHHhCCeEEEc--CCCCChHHHHHHHHHHhhhcCCCcEE
Q 010552 120 L-TTYPSSAEIISEPLGVVLVISTW---NYPFLLSLDPVIGAIAAGNAVVLK--PSEIAPATSSLLAKLLEDYVDNSAVR 193 (507)
Q Consensus 120 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~ALaaGN~vVlK--ps~~~~~~~~~l~~ll~~alp~g~v~ 193 (507)
. ...|.....++.|+.-|++..|. -|| ++.+...+||-.+|+.=|+- |..-.|.+ ...+.+ .|+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~AA~l------~Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADEI-LYAAQL------CGVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHHH-HHHHHH------TTCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHHH-HHHHHH------cCCCE
Confidence 1 12345566788999999999996 355 44555688999999875544 43233332 111122 13323
Q ss_pred EEe-CChHhHHHHH---hc-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCCCcEEE--cCCCCHHHHHHHHHHH
Q 010552 194 VVE-GAVAETSALL---EQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL-GGKSPAVV--DSTINLQVTTRRIIAG 264 (507)
Q Consensus 194 ~v~-g~~~~~~~L~---~~-~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~p~iV--~~daDl~~aa~~i~~~ 264 (507)
+.. |+.+...+|. +. + ||+|+=.|..-+..+=..-... ...|-..+ .|.+=++| |++||.+..+..++.-
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~-~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-LDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC-TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh-cCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 332 4555555554 22 3 9999988865443211111000 11222222 35554333 6679999999888877
Q ss_pred hhhcCCCCccccCCEEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCeEEecCccC
Q 010552 265 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD 344 (507)
Q Consensus 265 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~l~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~ 344 (507)
+= +.- ..+.++|..+ +++.++..+++.+....-| . .+...+.+
T Consensus 260 AE--Hd~----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp----------r---~~ia~~sl---------------- 302 (434)
T 1kae_A 260 AE--HGP----DSQVILLTPA--ADMARRVAEAVERQLAELP----------R---AETARQAL---------------- 302 (434)
T ss_dssp HT--TCT----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT----------T---HHHHHHHH----------------
T ss_pred hc--cCC----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC----------h---HHHHHHHH----------------
Confidence 75 221 2335667665 5555555555554321101 1 11111111
Q ss_pred CCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeeEEEC
Q 010552 345 EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFN 423 (507)
Q Consensus 345 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsa~i~t~d~~~~~~~~~~l-~~g~V~iN 423 (507)
..- .++.++|++||++++|..-.= -.-|.++|+. .+..++ .+|.|++.
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcC
Confidence 112 456789999999999995443 4678899985 466666 58999999
Q ss_pred CCcc-------cCCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 010552 424 DTIV-------HTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 463 (507)
Q Consensus 424 ~~~~-------~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~ 463 (507)
.++. ...++-+|- +|+.|+.+..+...|...-++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 7642 123344454 4557777777888888776654
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=64.43 E-value=15 Score=28.62 Aligned_cols=59 Identities=10% Similarity=0.119 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHH--hcCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 317 NPFHFARLASLLDED--KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 317 ~~~~~~~~~~~i~~a--~~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
+++.+++..+..... +.||+++.-|.. |.++.... .+-+.|+.|+|.+.|.++.|+-+|
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHHH
Confidence 444555444444444 237887765532 45554311 136789999999999999986544
No 56
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=58.83 E-value=12 Score=34.09 Aligned_cols=64 Identities=11% Similarity=0.070 Sum_probs=43.7
Q ss_pred hhHHHHHHHhCCeEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEeCChHhHHHHHhcCCCeEEEeCCh
Q 010552 151 LDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSP 219 (507)
Q Consensus 151 ~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~ll~~alp~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~ 219 (507)
+..++..+.+||-||++.+. +.....+..++...+|.+++++++.+.+ +.-...-+.+.++.+.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~---Y~~~~~cnilgls~~v 84 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQ---YEEAYRCNFLGLSPHV 84 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESS---CCCTTTCSEEEECTTC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchh---hcchhheeeecCCCCc
Confidence 45678889999999999876 4445556777888899999999865321 1111125666666543
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=51.93 E-value=31 Score=26.49 Aligned_cols=59 Identities=12% Similarity=0.077 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHHh--cCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCC
Q 010552 317 NPFHFARLASLLDEDK--VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 394 (507)
Q Consensus 317 ~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (507)
+++.+++..+...... -||+++.-| . +.++.+.. -..-+.|+.|+|.+.|.++.|+-.|
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~--------~~~lEG~~----------~~~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S--------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E--------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c--------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCHHH
Confidence 4455555555555442 267877765 3 34444321 0246789999999999999987554
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=46.80 E-value=54 Score=26.62 Aligned_cols=70 Identities=6% Similarity=0.103 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCeEEecCccC--CCCcee-----ecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC
Q 010552 321 FARLASLLDEDKVSDKIVYGGQRD--EKQLKI-----APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 393 (507)
Q Consensus 321 ~~~~~~~i~~a~~~~~v~~gg~~~--~~g~~~-----~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 393 (507)
.+...++.++..+.|.++.|+... ..+..+ .|+|....-.+ ..|..|- +.|+.++|.|||++++.+.+
T Consensus 32 ~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~~~P 106 (124)
T 1s7i_A 32 VDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAAKIP 106 (124)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHHhCC
Confidence 344555666555556666554321 122222 13443332222 3466665 56779999999999999877
Q ss_pred CC
Q 010552 394 KP 395 (507)
Q Consensus 394 ~g 395 (507)
+.
T Consensus 107 ~~ 108 (124)
T 1s7i_A 107 PG 108 (124)
T ss_dssp GG
T ss_pred cc
Confidence 64
No 59
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=31.59 E-value=1.1e+02 Score=21.38 Aligned_cols=36 Identities=17% Similarity=0.022 Sum_probs=27.4
Q ss_pred HHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010552 39 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 74 (507)
Q Consensus 39 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 74 (507)
.++.....|..+|.++|..........-+.+..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566789999999999998877776666666554
No 60
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=31.35 E-value=41 Score=21.99 Aligned_cols=28 Identities=25% Similarity=0.476 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 010552 55 RMSQIQSIANMIEEKEEEIIEAIHKDLS 82 (507)
Q Consensus 55 R~~~L~~~a~~l~~~~~~l~~~~~~e~G 82 (507)
..++|..+...|.+-+++|++++..|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999998887754
No 61
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=30.05 E-value=87 Score=26.11 Aligned_cols=64 Identities=14% Similarity=0.163 Sum_probs=40.6
Q ss_pred cCCHHHHHHHHHHHHHHh--cCCeEEecCccCCCCceeecEEEEcCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC
Q 010552 315 IVNPFHFARLASLLDEDK--VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 392 (507)
Q Consensus 315 l~~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 392 (507)
+.+++.+++..+...... -||++++-|.. +.++..... |.. ..+.|+.|+|.+.|.++.|+-
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~--------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF--------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE--------EEEEESCTT-------CCC-SEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC--------ceeEECCCC-------CCC-CeEEEEECCCHHHHHHHHcCH
Confidence 556677776666666553 37887765542 244443211 111 367899999999999998875
Q ss_pred CC
Q 010552 393 PK 394 (507)
Q Consensus 393 ~~ 394 (507)
.|
T Consensus 109 eY 110 (143)
T 3hhl_A 109 VY 110 (143)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 62
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.30 E-value=70 Score=27.06 Aligned_cols=114 Identities=14% Similarity=0.122 Sum_probs=68.3
Q ss_pred EEEEEEecCcc-chhhhhhHHHHHHHhCCeEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEe-C-ChHhHHHHHhcCCC
Q 010552 135 GVVLVISTWNY-PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE-G-AVAETSALLEQKWD 211 (507)
Q Consensus 135 GVv~~i~p~n~-P~~~~~~~~~~ALaaGN~vVlKps~~~~~~~~~l~~ll~~alp~g~v~~v~-g-~~~~~~~L~~~~v~ 211 (507)
|-|+++..-+- +-...+.+-...+.+|-.++-- .-|+..|.+. ..++-..++=++ | +++.++.+.+..||
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L~e~--~Gl~v~~v~k~~eGG~p~I~d~I~~geId 84 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLISRA--TGMNVNAMLSGPMGGDQQVGALISEGKID 84 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHHHHH--HCCCCEEECCGGGTHHHHHHHHHHTTCCC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHHHHH--hCceeEEEEecCCCCCchHHHHHHCCCcc
Confidence 55555544333 4444455556667778877752 2344444331 127755444332 2 33455555555799
Q ss_pred eEEEeCC-------hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHhhhcCCC
Q 010552 212 KILYTGS-------PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 271 (507)
Q Consensus 212 ~v~ftGs-------~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~~G 271 (507)
+|+||=+ ..-+..|.+.|..+..|+.-.+ ..|+.++.+.+ ++..
T Consensus 85 lVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~-~~~~ 135 (152)
T 1b93_A 85 VLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPH-FNDA 135 (152)
T ss_dssp EEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGG-GGSC
T ss_pred EEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 9999866 4567889999998888877554 45667777776 5553
No 63
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.04 E-value=49 Score=27.19 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=30.9
Q ss_pred CcEEEEeCChHh-HHHHHh-cCCCeEEEeCChHHHHHHHHHHhcccCc
Q 010552 190 SAVRVVEGAVAE-TSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTP 235 (507)
Q Consensus 190 g~v~~v~g~~~~-~~~L~~-~~v~~v~ftGs~~~g~~i~~~a~~~~~~ 235 (507)
|.+++++|+.+. -...+. .++..+++||+......+.+.|.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 568888785443 334444 4588999999888777777777654444
No 64
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.83 E-value=1.4e+02 Score=21.97 Aligned_cols=36 Identities=11% Similarity=-0.140 Sum_probs=27.3
Q ss_pred HHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010552 39 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 74 (507)
Q Consensus 39 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 74 (507)
.++.....|..++.++|..+.......-+.+..++.
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556779999999999998887776666666654
No 65
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.69 E-value=2.1e+02 Score=21.87 Aligned_cols=42 Identities=5% Similarity=-0.161 Sum_probs=30.4
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 010552 40 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL 81 (507)
Q Consensus 40 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 81 (507)
++..-..|..++.++|..+.......-+.+..++..-.....
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~ 90 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 90 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344456799999999999988887777777766665544433
No 66
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.33 E-value=70 Score=26.56 Aligned_cols=60 Identities=10% Similarity=0.103 Sum_probs=40.2
Q ss_pred HHHhhh-cCCCcEEEEe-C-C----hHhHHHHHhcCCCeEEEeCCh-----HHHHHHHHHHhcccCceeeec
Q 010552 181 KLLEDY-VDNSAVRVVE-G-A----VAETSALLEQKWDKILYTGSP-----RVGRIVMAAAAKHLTPVILEL 240 (507)
Q Consensus 181 ~ll~~a-lp~g~v~~v~-g-~----~~~~~~L~~~~v~~v~ftGs~-----~~g~~i~~~a~~~~~~~~lel 240 (507)
+.|++. +|-..|+-++ | + +...+.+.+..||+|++|=+. .-+..|.+.|..+..|++..+
T Consensus 61 ~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 61 DWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 344455 7765555444 2 2 445555555579999998655 367888999988888887664
No 67
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=21.86 E-value=1e+02 Score=22.62 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=29.5
Q ss_pred hCCeEEEcCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCC
Q 010552 160 AGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA 198 (507)
Q Consensus 160 aGN~vVlKps~~~~~~~~~l~~ll~~a-lp~g~v~~v~g~ 198 (507)
++|-+|+|..|-+ +..++.++.+. .+++++..+-|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999987655 67788889887 788888888774
No 68
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=20.53 E-value=33 Score=28.42 Aligned_cols=78 Identities=9% Similarity=0.044 Sum_probs=46.3
Q ss_pred HHHHhCCeEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEe-C-ChHhHHHHHhcCCCeEEEeCC-------hHHHHHHH
Q 010552 156 GAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE-G-AVAETSALLEQKWDKILYTGS-------PRVGRIVM 226 (507)
Q Consensus 156 ~ALaaGN~vVlKps~~~~~~~~~l~~ll~~alp~g~v~~v~-g-~~~~~~~L~~~~v~~v~ftGs-------~~~g~~i~ 226 (507)
..+.+|-.++- |.-|+..|.+. ..++-..++=++ + +++.++.+.+..+|+|+||=+ ..-+..|.
T Consensus 26 ~~ll~Gf~l~A-----T~gTa~~L~e~--~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~Ir 98 (134)
T 2xw6_A 26 REVLARFPLVA-----TGTTGRRIEEA--TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALL 98 (134)
T ss_dssp HHHHTTSCEEE-----CHHHHHHHHHH--HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHH
T ss_pred HHHhCCCEEEE-----ccHHHHHHHHh--hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHHHHH
Confidence 34445555443 33444444431 127755554444 4 445566555557999999876 23457788
Q ss_pred HHHhcccCceeeec
Q 010552 227 AAAAKHLTPVILEL 240 (507)
Q Consensus 227 ~~a~~~~~~~~lel 240 (507)
+.|..+..|+...+
T Consensus 99 R~A~~~~IP~~T~l 112 (134)
T 2xw6_A 99 RVCDVHGVPLATNP 112 (134)
T ss_dssp HHHHHHTCCEECSH
T ss_pred HHHHHcCCCeEcCH
Confidence 88888777777554
No 69
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=20.26 E-value=2e+02 Score=22.07 Aligned_cols=41 Identities=2% Similarity=-0.151 Sum_probs=32.1
Q ss_pred HHHHHhHhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 010552 39 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHK 79 (507)
Q Consensus 39 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 79 (507)
.++..-..|..++.+++..+..+....-+.+..++..-...
T Consensus 37 isK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~~ 77 (101)
T 1v63_A 37 RMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 77 (101)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 35566678999999999999988888777777777765443
No 70
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=20.11 E-value=1.6e+02 Score=21.55 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=27.4
Q ss_pred hCCeEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEeCC
Q 010552 160 AGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGA 198 (507)
Q Consensus 160 aGN~vVlKps~~~~~~~~~l~~ll~~alp~g~v~~v~g~ 198 (507)
++|-+|+|..|-+ +..++.++.+...++++..|-|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~eIlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQVVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCCeEEEEecC
Confidence 7999999988655 56788888887444588877764
Done!