Query 010554
Match_columns 507
No_of_seqs 308 out of 2544
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:18:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010554.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010554hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 2.7E-56 9.3E-61 474.0 41.6 411 91-507 17-451 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 1.4E-51 4.7E-56 434.1 38.9 380 92-499 10-414 (420)
3 3st8_A Bifunctional protein GL 100.0 4.6E-43 1.6E-47 377.2 31.1 372 92-507 10-444 (501)
4 2ggo_A 401AA long hypothetical 100.0 3E-40 1E-44 345.1 29.7 311 95-472 1-331 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 4.1E-40 1.4E-44 350.8 31.3 360 95-506 12-434 (468)
6 4fce_A Bifunctional protein GL 100.0 2.2E-38 7.5E-43 336.4 27.1 360 93-507 7-430 (459)
7 2v0h_A Bifunctional protein GL 100.0 2.3E-37 7.9E-42 328.3 28.2 327 92-472 3-352 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 7E-37 2.4E-41 304.8 23.2 243 94-374 2-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.6E-34 5.4E-39 286.3 27.5 237 92-375 22-261 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 2.6E-33 8.7E-38 282.0 26.4 244 92-375 6-283 (302)
11 2ux8_A Glucose-1-phosphate uri 100.0 2.1E-33 7.2E-38 282.0 20.2 246 93-376 13-282 (297)
12 1tzf_A Glucose-1-phosphate cyt 100.0 1.3E-32 4.5E-37 270.0 24.3 245 94-375 2-252 (259)
13 2pa4_A UTP-glucose-1-phosphate 100.0 2.3E-32 8E-37 277.8 23.0 246 93-376 11-285 (323)
14 4evw_A Nucleoside-diphosphate- 100.0 2.5E-32 8.7E-37 268.5 19.6 229 97-370 2-244 (255)
15 3pnn_A Conserved domain protei 100.0 3.6E-32 1.2E-36 274.1 20.2 258 93-373 4-291 (303)
16 1fxo_A Glucose-1-phosphate thy 100.0 4.3E-31 1.5E-35 264.9 26.0 233 94-372 2-240 (293)
17 1lvw_A Glucose-1-phosphate thy 100.0 5E-31 1.7E-35 264.6 26.3 233 94-372 3-241 (295)
18 1mc3_A Glucose-1-phosphate thy 100.0 3.2E-31 1.1E-35 266.2 21.4 232 95-372 4-241 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 3.2E-30 1.1E-34 260.4 17.9 240 94-371 4-282 (308)
20 1jyk_A LICC protein, CTP:phosp 100.0 3.4E-28 1.1E-32 238.9 16.4 221 94-373 25-252 (254)
21 2x65_A Mannose-1-phosphate gua 100.0 2.4E-28 8.3E-33 249.4 15.9 233 95-367 2-270 (336)
22 2cu2_A Putative mannose-1-phos 99.9 4.8E-27 1.7E-31 239.9 13.9 232 95-369 3-267 (337)
23 3oam_A 3-deoxy-manno-octuloson 99.9 1.4E-25 4.7E-30 220.0 22.9 239 94-374 2-250 (252)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 3.3E-23 1.1E-27 203.4 21.9 237 94-370 9-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 3E-23 1E-27 204.6 21.5 237 94-371 18-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 3E-22 1E-26 193.1 22.1 225 94-371 2-231 (234)
27 1h7e_A 3-deoxy-manno-octuloson 99.9 2E-22 6.8E-27 195.9 18.3 229 94-373 2-239 (245)
28 2xme_A CTP-inositol-1-phosphat 99.9 6.8E-23 2.3E-27 197.8 12.9 215 92-370 16-231 (232)
29 1vic_A 3-deoxy-manno-octuloson 99.9 5.6E-21 1.9E-25 187.9 21.8 242 94-374 2-254 (262)
30 4fcu_A 3-deoxy-manno-octuloson 99.9 1.7E-20 5.7E-25 183.8 22.0 238 95-374 2-251 (253)
31 2icy_A Probable UTP-glucose-1- 99.8 1.8E-19 6.1E-24 190.1 27.2 252 93-372 78-373 (469)
32 3f1c_A Putative 2-C-methyl-D-e 99.8 3.7E-20 1.3E-24 180.5 17.0 230 93-375 2-236 (246)
33 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 4.7E-20 1.6E-24 177.6 16.4 223 95-371 3-233 (236)
34 1vgw_A 4-diphosphocytidyl-2C-m 99.8 1.6E-18 5.4E-23 166.6 21.7 220 93-371 5-228 (231)
35 2xwl_A 2-C-methyl-D-erythritol 99.8 5E-19 1.7E-23 169.1 17.2 214 94-373 2-220 (223)
36 1ezi_A CMP-N-acetylneuraminic 99.8 4.7E-19 1.6E-23 170.3 16.9 216 94-372 4-224 (228)
37 2yc3_A 2-C-methyl-D-erythritol 99.8 3.3E-19 1.1E-23 171.1 13.7 220 93-373 3-226 (228)
38 2dpw_A Hypothetical protein TT 99.8 5.9E-20 2E-24 177.5 7.7 200 94-365 2-231 (232)
39 2i5k_A UTP--glucose-1-phosphat 99.8 3E-17 1E-21 174.1 25.2 204 92-324 90-323 (488)
40 1qwj_A Cytidine monophospho-N- 99.7 2.9E-17 9.8E-22 158.2 14.8 215 94-373 3-222 (229)
41 1i52_A 4-diphosphocytidyl-2-C- 99.7 1.1E-16 3.7E-21 154.5 17.8 219 93-374 6-230 (236)
42 2waw_A MOBA relate protein; un 99.7 6.9E-17 2.4E-21 151.1 15.0 186 94-371 5-195 (199)
43 2wee_A MOBA-related protein; u 99.7 5.6E-17 1.9E-21 151.6 12.8 185 94-370 5-194 (197)
44 3rsb_A Adenosylcobinamide-phos 99.7 3.7E-17 1.3E-21 153.2 11.5 130 95-252 1-137 (196)
45 1vpa_A 2-C-methyl-D-erythritol 99.7 4.5E-15 1.5E-19 142.7 20.1 214 94-373 13-229 (234)
46 2px7_A 2-C-methyl-D-erythritol 99.7 6.5E-16 2.2E-20 149.5 13.1 204 95-373 26-233 (236)
47 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.6 4.2E-17 1.4E-21 168.6 4.5 102 216-357 12-117 (374)
48 1jv1_A Glcnac1P uridyltransfer 99.6 5.3E-15 1.8E-19 157.4 18.7 210 93-324 101-344 (505)
49 3q80_A 2-C-methyl-D-erythritol 99.6 2.1E-14 7.1E-19 138.6 18.9 217 94-371 7-229 (231)
50 2e8b_A Probable molybdopterin- 99.6 6.1E-15 2.1E-19 139.1 10.7 179 93-371 13-198 (201)
51 1e5k_A Molybdopterin-guanine d 99.5 8.1E-14 2.8E-18 131.4 15.7 111 92-236 4-116 (201)
52 3d5n_A Q97W15_sulso; NESG, SSR 99.5 1.7E-14 5.8E-19 135.6 8.0 181 95-372 3-189 (197)
53 2oeg_A UTP-glucose-1-phosphate 99.5 2.9E-13 9.9E-18 143.4 17.9 212 94-324 75-323 (505)
54 2yqc_A UDP-N-acetylglucosamine 99.4 1.6E-12 5.5E-17 137.9 17.1 217 93-324 102-352 (486)
55 3oc9_A UDP-N-acetylglucosamine 99.4 5.2E-12 1.8E-16 130.0 19.4 209 93-322 34-275 (405)
56 1w55_A ISPD/ISPF bifunctional 99.3 8.2E-13 2.8E-17 135.9 7.8 196 94-368 3-202 (371)
57 3ngw_A Molybdopterin-guanine d 99.3 2.1E-11 7.3E-16 115.5 16.7 115 95-246 1-117 (208)
58 3r8y_A 2,3,4,5-tetrahydropyrid 99.3 2.1E-13 7E-18 132.3 -1.6 30 341-373 36-69 (240)
59 3c8v_A Putative acetyltransfer 99.2 2.5E-12 8.7E-17 136.3 -0.1 76 395-473 278-360 (496)
60 1qre_A Carbonic anhydrase; bet 99.0 5E-10 1.7E-14 108.9 8.1 65 436-506 141-206 (247)
61 4e79_A UDP-3-O-acylglucosamine 98.9 7E-09 2.4E-13 106.2 14.3 40 354-393 78-117 (357)
62 3bfp_A Acetyltransferase; LEFT 98.9 1.9E-08 6.3E-13 94.0 15.1 15 493-507 162-176 (194)
63 3eh0_A UDP-3-O-[3-hydroxymyris 98.9 1.5E-08 5.2E-13 103.0 15.3 45 356-400 74-119 (341)
64 4eqy_A Acyl-[acyl-carrier-prot 98.9 6.5E-09 2.2E-13 103.0 12.2 40 436-478 101-148 (283)
65 3pmo_A UDP-3-O-[3-hydroxymyris 98.9 1.6E-08 5.3E-13 104.1 14.7 43 355-397 95-138 (372)
66 3ixc_A Hexapeptide transferase 98.8 1.1E-08 3.9E-13 95.2 10.1 91 406-506 51-156 (191)
67 3r0s_A Acyl-[acyl-carrier-prot 98.8 2.1E-08 7.3E-13 98.4 12.2 61 445-506 115-176 (266)
68 1xhd_A Putative acetyltransfer 98.8 2E-08 6.8E-13 91.9 10.7 81 393-476 15-111 (173)
69 4e6u_A Acyl-[acyl-carrier-prot 98.8 2.8E-08 9.5E-13 97.4 12.4 16 436-454 86-101 (265)
70 1j2z_A Acyl-[acyl-carrier-prot 98.8 2.9E-08 1E-12 97.6 12.4 14 493-506 159-172 (270)
71 3hsq_A Acyl-[acyl-carrier-prot 98.8 2.9E-08 9.8E-13 97.0 11.5 46 459-505 119-164 (259)
72 2qia_A UDP-N-acetylglucosamine 98.8 3.9E-08 1.3E-12 96.1 12.4 39 436-477 84-130 (262)
73 3vbi_A ANTD, galactoside O-ace 98.8 1.7E-08 5.8E-13 94.9 9.2 50 406-470 52-106 (205)
74 2v0h_A Bifunctional protein GL 98.8 1.1E-08 3.9E-13 107.6 8.5 113 391-507 284-427 (456)
75 1v3w_A Ferripyochelin binding 98.7 3.3E-08 1.1E-12 90.5 10.1 91 406-506 28-132 (173)
76 3kwd_A Carbon dioxide concentr 98.7 4.6E-08 1.6E-12 92.6 11.4 66 436-507 112-178 (213)
77 3fs8_A QDTC; acetyltransferase 98.7 3.5E-08 1.2E-12 96.9 10.8 59 436-498 89-148 (273)
78 4eqy_A Acyl-[acyl-carrier-prot 98.7 4.7E-08 1.6E-12 96.8 11.2 67 436-506 126-193 (283)
79 3r3r_A Ferripyochelin binding 98.7 3.8E-08 1.3E-12 91.0 9.6 61 436-506 84-144 (187)
80 1hm9_A GLMU, UDP-N-acetylgluco 98.7 2.3E-08 7.7E-13 105.7 8.9 67 402-472 287-360 (468)
81 3fs8_A QDTC; acetyltransferase 98.7 7E-08 2.4E-12 94.7 11.6 49 427-478 96-147 (273)
82 4e6u_A Acyl-[acyl-carrier-prot 98.7 6.9E-08 2.4E-12 94.5 11.5 97 406-506 55-178 (265)
83 3r3i_A UTP--glucose-1-phosphat 98.7 1.8E-06 6E-11 91.2 22.7 260 89-371 122-428 (528)
84 3brk_X Glucose-1-phosphate ade 98.7 1.3E-08 4.4E-13 106.4 6.4 54 431-507 335-389 (420)
85 3r0s_A Acyl-[acyl-carrier-prot 98.7 8.4E-08 2.9E-12 94.1 11.8 66 436-505 84-157 (266)
86 3r1w_A Carbonic anhydrase; bet 98.7 5.2E-08 1.8E-12 90.2 9.6 91 406-506 37-148 (189)
87 3t57_A UDP-N-acetylglucosamine 98.7 9.7E-08 3.3E-12 95.6 12.0 13 494-506 188-200 (305)
88 3mqg_A Lipopolysaccharides bio 98.7 8.2E-08 2.8E-12 89.2 10.5 14 493-506 121-134 (192)
89 3r8y_A 2,3,4,5-tetrahydropyrid 98.7 4.3E-08 1.5E-12 94.6 8.8 84 379-473 86-183 (240)
90 1xhd_A Putative acetyltransfer 98.7 7.1E-08 2.4E-12 88.2 9.7 15 407-421 52-67 (173)
91 1j2z_A Acyl-[acyl-carrier-prot 98.7 1.1E-07 3.7E-12 93.5 11.3 24 482-506 143-166 (270)
92 2pig_A Putative transferase; S 98.6 1.2E-07 4.3E-12 95.7 11.8 79 391-472 84-196 (334)
93 3tk8_A 2,3,4,5-tetrahydropyrid 98.6 2.1E-08 7E-13 100.7 5.9 22 333-355 73-95 (316)
94 3ixc_A Hexapeptide transferase 98.6 7.9E-08 2.7E-12 89.4 9.2 75 428-507 60-145 (191)
95 3gos_A 2,3,4,5-tetrahydropyrid 98.6 3.5E-08 1.2E-12 97.4 6.9 18 456-473 178-195 (276)
96 3c8v_A Putative acetyltransfer 98.6 8.8E-08 3E-12 101.6 9.7 226 193-472 124-381 (496)
97 4ea9_A Perosamine N-acetyltran 98.6 2.8E-07 9.6E-12 87.5 11.8 19 355-373 75-93 (220)
98 3r1w_A Carbonic anhydrase; bet 98.6 1.4E-07 4.8E-12 87.2 9.4 41 428-471 96-138 (189)
99 2qia_A UDP-N-acetylglucosamine 98.6 2.3E-07 8E-12 90.5 11.4 61 445-506 115-176 (262)
100 3jqy_B NEUO, polysialic acid O 98.6 1.3E-07 4.5E-12 91.9 9.5 67 437-507 107-196 (252)
101 3hsq_A Acyl-[acyl-carrier-prot 98.6 3.3E-07 1.1E-11 89.4 11.8 51 455-506 121-171 (259)
102 3tv0_A Dynactin subunit 6; LEF 98.6 2.5E-07 8.6E-12 86.2 10.4 61 436-506 86-146 (194)
103 3pmo_A UDP-3-O-[3-hydroxymyris 98.5 2.7E-07 9.3E-12 94.9 10.8 39 436-477 223-266 (372)
104 3r3r_A Ferripyochelin binding 98.5 2.3E-07 7.7E-12 85.7 9.2 88 406-507 33-133 (187)
105 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.5 5.8E-07 2E-11 92.4 12.9 47 459-506 266-312 (374)
106 4e79_A UDP-3-O-acylglucosamine 98.5 3E-07 1E-11 94.0 10.5 32 437-471 152-184 (357)
107 4fce_A Bifunctional protein GL 98.5 1.6E-07 5.5E-12 98.8 8.5 67 402-471 281-354 (459)
108 3gue_A UTP-glucose-1-phosphate 98.5 3.3E-05 1.1E-09 80.9 25.6 259 93-372 75-389 (484)
109 1qre_A Carbonic anhydrase; bet 98.5 3.6E-07 1.2E-11 88.5 9.9 49 456-506 141-189 (247)
110 3mqg_A Lipopolysaccharides bio 98.5 3.6E-07 1.2E-11 84.8 9.1 17 456-472 103-119 (192)
111 2pig_A Putative transferase; S 98.5 2.4E-07 8.3E-12 93.6 8.3 110 391-506 66-193 (334)
112 3tv0_A Dynactin subunit 6; LEF 98.5 3.2E-07 1.1E-11 85.5 8.6 49 456-506 86-134 (194)
113 3eg4_A 2,3,4,5-tetrahydropyrid 98.5 2.3E-07 8E-12 92.6 8.0 29 340-368 61-91 (304)
114 3eh0_A UDP-3-O-[3-hydroxymyris 98.5 4.5E-07 1.5E-11 92.1 10.1 39 437-478 202-245 (341)
115 1v3w_A Ferripyochelin binding 98.5 7.3E-07 2.5E-11 81.4 10.4 63 407-472 50-123 (173)
116 3tk8_A 2,3,4,5-tetrahydropyrid 98.4 3.3E-07 1.1E-11 91.9 8.5 34 445-478 199-241 (316)
117 3kwd_A Carbon dioxide concentr 98.4 7.5E-07 2.6E-11 84.2 9.6 62 407-471 80-162 (213)
118 3t57_A UDP-N-acetylglucosamine 98.4 1.1E-06 3.9E-11 87.7 11.5 14 493-506 181-194 (305)
119 3eg4_A 2,3,4,5-tetrahydropyrid 98.4 5.7E-07 1.9E-11 89.8 9.0 52 437-491 178-238 (304)
120 3gos_A 2,3,4,5-tetrahydropyrid 98.4 6.1E-07 2.1E-11 88.4 9.0 12 344-356 45-56 (276)
121 2ggo_A 401AA long hypothetical 98.4 8.9E-07 3E-11 91.5 10.6 57 395-454 267-330 (401)
122 3r5d_A Tetrahydrodipicolinate 98.4 1.1E-06 3.9E-11 87.3 10.4 32 436-470 231-271 (347)
123 3fsy_A Tetrahydrodipicolinate 98.4 1.2E-06 4E-11 86.7 9.6 32 436-470 208-248 (332)
124 4ea9_A Perosamine N-acetyltran 98.3 1.1E-06 3.7E-11 83.4 9.0 27 445-471 154-181 (220)
125 2rij_A Putative 2,3,4,5-tetrah 98.3 1.7E-06 5.8E-11 88.3 10.7 26 348-373 165-192 (387)
126 2wlg_A Polysialic acid O-acety 98.3 2E-06 6.7E-11 81.4 9.4 18 455-472 100-117 (215)
127 3srt_A Maltose O-acetyltransfe 98.3 2E-06 6.9E-11 79.7 9.2 10 407-416 77-86 (188)
128 3ftt_A Putative acetyltransfer 98.3 2.3E-06 7.8E-11 80.1 9.2 15 456-470 143-157 (199)
129 3bfp_A Acetyltransferase; LEFT 98.2 2.7E-06 9.2E-11 79.2 9.2 20 354-373 50-69 (194)
130 3nz2_A Hexapeptide-repeat cont 98.2 2.7E-06 9.2E-11 79.4 8.5 9 408-416 98-106 (195)
131 3vbi_A ANTD, galactoside O-ace 98.2 3.7E-06 1.3E-10 78.7 9.6 19 454-472 133-151 (205)
132 3mc4_A WW/RSP5/WWP domain:bact 98.2 3.2E-06 1.1E-10 83.2 8.3 78 392-472 166-251 (287)
133 3hjj_A Maltose O-acetyltransfe 98.2 4.4E-06 1.5E-10 77.5 8.5 8 409-416 101-108 (190)
134 4hur_A Virginiamycin A acetylt 98.2 1.1E-06 3.9E-11 83.5 4.4 17 456-472 120-136 (220)
135 3r5d_A Tetrahydrodipicolinate 98.1 1.5E-06 5.3E-11 86.4 5.2 13 494-506 274-286 (347)
136 1yp2_A Glucose-1-phosphate ade 98.1 2.7E-06 9.4E-11 89.4 6.9 94 406-504 314-435 (451)
137 3jqy_B NEUO, polysialic acid O 98.1 7E-06 2.4E-10 79.6 8.8 16 457-472 165-180 (252)
138 3st8_A Bifunctional protein GL 98.1 1.1E-05 3.7E-10 86.1 10.8 88 406-505 352-452 (501)
139 3fsy_A Tetrahydrodipicolinate 98.1 2.7E-06 9.1E-11 84.1 5.4 11 406-416 173-183 (332)
140 2p2o_A Maltose transacetylase; 98.1 8E-06 2.7E-10 75.5 8.3 14 407-420 95-109 (185)
141 1krr_A Galactoside O-acetyltra 98.0 1E-05 3.5E-10 75.9 8.4 27 445-471 132-159 (203)
142 1ocx_A Maltose O-acetyltransfe 98.0 1E-05 3.4E-10 74.7 8.1 8 409-416 95-102 (182)
143 3q1x_A Serine acetyltransferas 98.0 4.1E-06 1.4E-10 83.6 5.5 32 437-471 225-257 (313)
144 3f1x_A Serine acetyltransferas 98.0 6.2E-06 2.1E-10 82.2 6.8 78 390-472 190-286 (310)
145 1ssq_A SAT, serine acetyltrans 98.0 1.2E-05 4.3E-10 78.4 8.5 28 214-241 19-48 (267)
146 1t3d_A SAT, serine acetyltrans 98.0 1.6E-05 5.4E-10 78.4 8.5 28 214-241 39-68 (289)
147 3nz2_A Hexapeptide-repeat cont 97.8 3.6E-05 1.2E-09 71.6 8.2 47 438-506 99-164 (195)
148 1krr_A Galactoside O-acetyltra 97.8 0.00015 5E-09 68.0 11.9 27 445-471 138-165 (203)
149 2wlg_A Polysialic acid O-acety 97.8 7.9E-05 2.7E-09 70.2 9.7 33 437-472 102-154 (215)
150 3eev_A Chloramphenicol acetylt 97.8 3.1E-05 1.1E-09 73.0 6.5 15 406-420 58-73 (212)
151 3mc4_A WW/RSP5/WWP domain:bact 97.7 2.8E-05 9.6E-10 76.5 6.0 34 437-473 192-234 (287)
152 3hjj_A Maltose O-acetyltransfe 97.7 6.1E-05 2.1E-09 69.7 7.6 32 438-472 101-151 (190)
153 3q1x_A Serine acetyltransferas 97.7 5.5E-05 1.9E-09 75.5 7.4 18 455-472 223-240 (313)
154 3ftt_A Putative acetyltransfer 97.7 3.7E-05 1.3E-09 71.8 5.3 54 406-472 74-147 (199)
155 1ssq_A SAT, serine acetyltrans 97.6 0.0002 6.7E-09 69.9 10.1 34 436-472 190-224 (267)
156 2p2o_A Maltose transacetylase; 97.6 0.00045 1.5E-08 63.6 11.7 11 406-416 74-84 (185)
157 3srt_A Maltose O-acetyltransfe 97.6 6.9E-05 2.4E-09 69.3 6.1 65 389-472 61-149 (188)
158 1t3d_A SAT, serine acetyltrans 97.6 0.00024 8.1E-09 70.0 10.1 34 436-472 210-244 (289)
159 2rij_A Putative 2,3,4,5-tetrah 97.5 5E-05 1.7E-09 77.5 4.3 31 436-469 265-304 (387)
160 3f1x_A Serine acetyltransferas 97.5 7.1E-05 2.4E-09 74.5 5.4 16 457-472 253-268 (310)
161 1ocx_A Maltose O-acetyltransfe 97.5 0.0011 3.7E-08 60.9 12.6 16 456-471 129-144 (182)
162 3ogz_A UDP-sugar pyrophosphory 97.5 0.0017 5.9E-08 69.8 15.7 220 93-324 113-375 (630)
163 4e8l_A Virginiamycin A acetylt 97.5 0.00018 6.2E-09 68.2 7.3 9 408-416 67-75 (219)
164 1mr7_A Streptogramin A acetylt 97.3 0.00036 1.2E-08 65.6 7.2 14 407-420 61-75 (209)
165 4hur_A Virginiamycin A acetylt 97.3 0.00018 6.1E-09 68.2 5.0 22 485-507 131-152 (220)
166 3eev_A Chloramphenicol acetylt 97.3 0.0004 1.4E-08 65.3 6.8 11 406-416 24-34 (212)
167 1xat_A Xenobiotic acetyltransf 97.1 0.00088 3E-08 63.1 7.0 16 405-420 55-71 (212)
168 1xat_A Xenobiotic acetyltransf 96.6 0.0038 1.3E-07 58.7 7.7 14 402-415 57-71 (212)
169 2i5e_A Hypothetical protein MM 96.4 0.006 2.1E-07 56.9 7.6 105 93-235 2-111 (211)
170 1mr7_A Streptogramin A acetylt 95.8 0.014 4.9E-07 54.6 6.7 12 406-417 29-40 (209)
171 4e8l_A Virginiamycin A acetylt 95.6 0.022 7.4E-07 53.8 7.1 12 406-417 34-45 (219)
172 3bcv_A Putative glycosyltransf 83.4 11 0.00037 34.3 11.8 107 118-246 9-118 (240)
173 1qg8_A Protein (spore coat pol 77.3 43 0.0015 30.5 14.4 111 119-243 6-120 (255)
174 3cgx_A Putative nucleotide-dip 72.9 15 0.00053 34.4 9.4 88 127-238 38-129 (242)
175 1xhb_A Polypeptide N-acetylgal 61.8 1.3E+02 0.0044 30.4 14.7 105 119-243 34-145 (472)
176 2ffu_A Ppgalnact-2, polypeptid 52.7 1.2E+02 0.0042 31.0 12.7 100 119-243 71-177 (501)
177 2z86_A Chondroitin synthase; G 46.2 1.6E+02 0.0054 31.0 12.6 105 118-243 97-205 (625)
178 2d7i_A Polypeptide N-acetylgal 46.0 1.4E+02 0.0049 31.3 12.1 103 118-241 116-225 (570)
179 2z86_A Chondroitin synthase; G 45.2 1.5E+02 0.005 31.3 12.1 101 118-240 379-482 (625)
180 3ckj_A Putative uncharacterize 39.9 2E+02 0.0069 27.5 11.3 110 119-247 53-168 (329)
181 3f1y_A Mannosyl-3-phosphoglyce 25.0 1.8E+02 0.0063 28.9 8.2 109 118-249 98-218 (387)
182 1l0s_A Thermal hysteresis prot 24.5 81 0.0028 24.0 3.9 15 448-462 59-73 (90)
183 4fix_A UDP-galactofuranosyl tr 24.1 3.5E+02 0.012 29.0 10.6 107 119-246 185-302 (657)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=2.7e-56 Score=474.01 Aligned_cols=411 Identities=53% Similarity=0.990 Sum_probs=335.9
Q ss_pred CCCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCc-c
Q 010554 91 DPKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGT-N 169 (507)
Q Consensus 91 ~~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~-~ 169 (507)
+|++|+|||||||.||||+|||..+||||+||+|+||||+|+|++|.++|+++|+|+++++.+++.+|+.+.| +.+. .
T Consensus 17 ~~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~-~~~~~~ 95 (451)
T 1yp2_A 17 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGG 95 (451)
T ss_dssp HHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHC-C-----
T ss_pred cccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhh-hccccc
Confidence 4678999999999999999999999999999999889999999999999999999999999999999997543 2110 0
Q ss_pred c-CCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCCHHHHHHHHHHcCCceEEEE
Q 010554 170 F-GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISC 248 (507)
Q Consensus 170 ~-~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ll~~h~~~~a~~tl~~ 248 (507)
+ ..+.++++...|.+ ..++|.+||+++|+.+++++++ ...++|+|++||++++.+|.++++.|+++++++|+++
T Consensus 96 ~~~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~~~~---~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~ 170 (451)
T 1yp2_A 96 YKNEGFVEVLAAQQSP--ENPDWFQGTADAVRQYLWLFEE---HTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAA 170 (451)
T ss_dssp ---CCEEEEEESCSST--TSCCCCCSHHHHHHHTHHHHTT---SCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccccCcEEEecccccc--cccccccCcHHHHHHHHHHHHh---cCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEE
Confidence 1 12335666543332 1235678999999999888852 1247899999999999999999999999999999998
Q ss_pred EEcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC
Q 010554 249 AAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT 328 (507)
Q Consensus 249 ~~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~ 328 (507)
.+.+.+.+.+||++.+|++++|+.|.|||..+..+.++++.++|+..+......++++++|+|+|++++|.++++...+.
T Consensus 171 ~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 250 (451)
T 1yp2_A 171 LPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPG 250 (451)
T ss_dssp EEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTT
T ss_pred EEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhccc
Confidence 88753335689999999889999999999865555566677766554332222357999999999999987787765555
Q ss_pred CCchhhhhHHhhhhc-CcEEEEEeccEEEecCCHHHHHHHHHHhhccC-CCccccCCCCCcccCCCcCCCceecceeeec
Q 010554 329 SNDFGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKES-PAFHFYDPKTPFYTSPRFLPPTKIDNCRIKD 406 (507)
Q Consensus 329 ~~d~~~dil~~li~~-~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~-~~~~~~~~~~~i~~~~~~~~p~~i~~~~I~~ 406 (507)
..+|..++++.++++ .++++|.+++||.||||+++|++|+++++++. +...++++...+++.+.+.|++++.++.|.+
T Consensus 251 ~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I~~ 330 (451)
T 1yp2_A 251 ANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTD 330 (451)
T ss_dssp CCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEEEE
T ss_pred ccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEEeC
Confidence 567777899998887 79999999999999999999999999999877 6677889999999999999999998899999
Q ss_pred eEEcCCcEEccceEeeeeE---EeeccCceEe-eeecCCC----------------cceeeCCCcEEeeeEeCCCCEECC
Q 010554 407 AIISHGCFLRECTVEHSIV---DYYQTESEIA-SLLAEGK----------------VPIGVGRNTKIRNCIIDKNVKIGK 466 (507)
Q Consensus 407 siIg~gc~I~~~~I~~Sii---~~vg~~~~i~-s~l~~g~----------------~~~~Ig~~~~I~nsIIg~na~Ig~ 466 (507)
++||+||+|++|.|.+++| +.+|.++.|. ++++.+. +.+.||+|+.|.+|+||++|.||+
T Consensus 331 ~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~ 410 (451)
T 1yp2_A 331 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGD 410 (451)
T ss_dssp EEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECT
T ss_pred eEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECC
Confidence 9999999998888889999 4789999995 6665441 115899999999999999999999
Q ss_pred CcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 467 DVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 467 ~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
|++|.+++++....++++++.|.+|.++||+++.|++|++|
T Consensus 411 ~~~i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 411 NVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp TCEECCSSCCSCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred CCEEeCCcccccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 99999988887767888999999998899999999999986
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.4e-51 Score=434.12 Aligned_cols=380 Identities=33% Similarity=0.562 Sum_probs=302.6
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
|++|+|||||||.|+||+|||..+||+|+||+|+||||+|+|++|.++|+++|+|+++++.+++.+|+.+.| +....+.
T Consensus 10 m~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~-~~~~~~~ 88 (420)
T 3brk_X 10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGW-DFFRPER 88 (420)
T ss_dssp GGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHS-CCCCGGG
T ss_pred hhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhh-ccccccc
Confidence 567999999999999999999999999999999978999999999999999999999999999999987543 2111111
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
...++++...+.. ....|++||+++|+.++.++.+ ...++|+|++||++++.++.++++.|+++++++|+++.+.
T Consensus 89 ~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~l~~---~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~ 163 (420)
T 3brk_X 89 NESFDILPASQRV--SETQWYEGTADAVYQNIDIIEP---YAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEV 163 (420)
T ss_dssp TCEEEEECCC---------CCCCHHHHHHTTHHHHHH---HCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEE
T ss_pred cCCEEEeCccccc--cCCccccCCHHHHHHHHHHHHh---cCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeec
Confidence 1235665433310 0124668999999999888853 1237899999999999999999999999999999999887
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC---C
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP---T 328 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~---~ 328 (507)
+.+.+..||++.+|++|+|+.|.|||..+... . . ...++++++|+|+|++++|.++++...+ .
T Consensus 164 ~~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--~------~------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~ 229 (420)
T 3brk_X 164 PRMEATGFGVMHVNEKDEIIDFIEKPADPPGI--P------G------NEGFALASMGIYVFHTKFLMEAVRRDAADPTS 229 (420)
T ss_dssp ETTGGGGSEEEEECTTSBEEEEEESCSSCCCB--T------T------BTTEEEEEEEEEEEEHHHHHHHHTSSCCC---
T ss_pred CccccCcccEEEECCCCcEEEeEeCCCccccc--c------c------cccceEEeeeeEEEeHHHHHHHHHHhcccCCc
Confidence 54456789999999889999999998643210 0 0 0124789999999999998777765433 1
Q ss_pred CCchhhhhHHhhhhcCcEEEEEe-----------ccEEEecCCHHHHHHHHHHhhccCCCccccCCCCCcccCCCcCCCc
Q 010554 329 SNDFGSEIIPAAIMEHDVQAYIF-----------RDYWEDIGTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRFLPPT 397 (507)
Q Consensus 329 ~~d~~~dil~~li~~~~V~~~~~-----------~gyw~dIgt~~~y~~An~~ll~~~~~~~~~~~~~~i~~~~~~~~p~ 397 (507)
..+|..++++.+++++++++|.+ ++||.||||+++|++||++++++++...++.+.+++++.+.+.||+
T Consensus 230 ~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~~ 309 (420)
T 3brk_X 230 SRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPA 309 (420)
T ss_dssp -------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCCC
T ss_pred cccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCCc
Confidence 34566789999998889999999 8999999999999999999999888777888889999999999999
Q ss_pred eec------ceeeeceEEcCCcEEccceEeeeeE---EeeccCceE-eeeecCCCcceeeCCCcEEeeeEeCCCCEECCC
Q 010554 398 KID------NCRIKDAIISHGCFLRECTVEHSIV---DYYQTESEI-ASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKD 467 (507)
Q Consensus 398 ~i~------~~~I~~siIg~gc~I~~~~I~~Sii---~~vg~~~~i-~s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~ 467 (507)
+++ ++.+.++.||+||+|.++.|.+|+| +.+|.++.| .|+|+++ +.||+||+|.+|+||+++.||++
T Consensus 310 ~i~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~---~~i~~~~~i~~~~ig~~~~i~~~ 386 (420)
T 3brk_X 310 KFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS---VKIGRHAQLSNVVIDHGVVIPEG 386 (420)
T ss_dssp EEECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTT---CEECTTCEEEEEEECTTCEECTT
T ss_pred EEecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCC---CEECCCCEEeceEECCCCEECCC
Confidence 986 4788899999999997789999999 478999998 4999999 89999999999999999999999
Q ss_pred cEEecCCCCccCCCCCCCeEE-cCCeEEEcCCC
Q 010554 468 VVIVNKDDVQEADRPELGFYI-RSGITIIMEKA 499 (507)
Q Consensus 468 ~~i~~~~~~~e~~~~~~~~~i-~~g~~vig~~~ 499 (507)
++|... . ..+.+++++ .+|+++|++++
T Consensus 387 ~~i~~~-~----~~~~~~~~~~~~~~~~~~~~~ 414 (420)
T 3brk_X 387 LIVGED-P----ELDAKRFRRTESGICLITQSM 414 (420)
T ss_dssp CEESSC-H----HHHHHHSEECTTSCEEECHHH
T ss_pred CEEeCC-C----CCCCceEEEecCceEEEecch
Confidence 999742 2 222234788 67877776653
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=4.6e-43 Score=377.24 Aligned_cols=372 Identities=17% Similarity=0.192 Sum_probs=258.4
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
+.++.+||||||+||||+|+| ||||+||+|+ |||+|+|++|.++|+++|+|+++|+.+++.+|+.+.. ..++
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~----~~~~ 81 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELA----DTLG 81 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHH----HHHT
T ss_pred CCCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHH----HhcC
Confidence 457899999999999999986 9999999999 9999999999999999999999999999999996421 1122
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec--cCCHHHHHHHHHHcCCceEEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCA 249 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~--~~dl~~ll~~h~~~~a~~tl~~~ 249 (507)
..++++. |. +++|||+||+++++++.+ ...+++++++||..+ ...+.+++++|+..++++|+++.
T Consensus 82 -~~i~~~~--q~-------~~lGTa~Av~~a~~~l~~---~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~ 148 (501)
T 3st8_A 82 -RTIDVAL--QD-------RPLGTGHAVLCGLSALPD---DYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTT 148 (501)
T ss_dssp -SCCEEEE--CS-------SCCCHHHHHHHHHTTSCT---TCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred -CcEEEEE--cC-------CCCCcHHHHHHHHHHhcc---ccccceeeecCcceeecHHHHHHHHHHHhhccccceEeee
Confidence 1244442 32 347999999999988853 234689999999843 35589999999999999999999
Q ss_pred EcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC--
Q 010554 250 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP-- 327 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~-- 327 (507)
++++ |..||++..|++|+|+.|.|||..+... ...+++++|+|+|++++|..+++....
T Consensus 149 ~~~d--p~~yG~i~~~~~g~v~~ivEk~~~~~~~-----------------~~i~~in~Giy~f~~~~l~~~l~~l~~~n 209 (501)
T 3st8_A 149 TLDD--PFGYGRILRTQDHEVMAIVEQTDATPSQ-----------------REIREVNAGVYAFDIAALRSALSRLSSNN 209 (501)
T ss_dssp ECSC--CTTSCEEEECTTCCEEEEECGGGCCHHH-----------------HHCCEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ccCC--chhccccccccceeEEeeccccCCChhh-----------------ccceeeeceeeeecchhHHHhhhhhcccc
Confidence 9887 7789999999999999999998643211 123689999999999999988875433
Q ss_pred -CCCchhhhhHHhhhhc-CcEEEEEeccEEEe--cCCHHHHHHHHHHhhccC------CCcccc-------CCCCCcccC
Q 010554 328 -TSNDFGSEIIPAAIME-HDVQAYIFRDYWED--IGTIKSFYEANMALTKES------PAFHFY-------DPKTPFYTS 390 (507)
Q Consensus 328 -~~~d~~~dil~~li~~-~~V~~~~~~gyw~d--Igt~~~y~~An~~ll~~~------~~~~~~-------~~~~~i~~~ 390 (507)
....+..+++..+... ..+.++...++|.. +++...+.++...+..+. ....+. +++..+...
T Consensus 210 ~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~d 289 (501)
T 3st8_A 210 AQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRD 289 (501)
T ss_dssp TTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTT
T ss_pred cccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCc
Confidence 2455677877776655 66777777766654 455555555444332211 111111 222222222
Q ss_pred CCcCCCceec-------------ceeeeceEE----------------cCCcEEc-cceEe-eeeE---EeeccCceEe-
Q 010554 391 PRFLPPTKID-------------NCRIKDAII----------------SHGCFLR-ECTVE-HSIV---DYYQTESEIA- 435 (507)
Q Consensus 391 ~~~~~p~~i~-------------~~~I~~siI----------------g~gc~I~-~~~I~-~Sii---~~vg~~~~i~- 435 (507)
+.+.+.+.+. .+.+.++.+ +++|.++ .+.+. +++| +.+|..+++.
T Consensus 290 v~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~ 369 (501)
T 3st8_A 290 TVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKN 369 (501)
T ss_dssp CEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEES
T ss_pred ceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEcc
Confidence 2222222211 122222222 2233332 12222 1222 3567777884
Q ss_pred eeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEecCCCC-------ccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 436 SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDV-------QEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~~~~~-------~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
+++++| +.|++.++|.+|+||+||.||+|+++.|.+++ ++....+.+..+-.+ +.||+++.|++|++|
T Consensus 370 s~Ig~g---skI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~-v~Ig~~~~i~ags~v 444 (501)
T 3st8_A 370 STIGTG---TKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAP-VTIGDGAYTGAGTVV 444 (501)
T ss_dssp CEECTT---CEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESS-EEECTTCEECTTCEE
T ss_pred ceecCC---cEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCC-cEECCCCEECCCCEE
Confidence 889999 88999999999999999999999999986654 334444444444455 678999999999875
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=3e-40 Score=345.08 Aligned_cols=311 Identities=19% Similarity=0.304 Sum_probs=236.7
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCe
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 174 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~ 174 (507)
|+|||||||.|+||+|||..+||+|+|++|+ |||+|++++|.++|+++|+|+++++ +.+|+.+.+. .
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~---------~ 67 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK---------E 67 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT---------T
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC---------c
Confidence 6899999999999999999999999999999 9999999999999999999999886 6667653210 1
Q ss_pred EEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceecc--CCHHHHHHHHHHcCCceEEEEEEcC
Q 010554 175 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYR--MDYMDFIQSHVDRDADITISCAAVG 252 (507)
Q Consensus 175 V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~--~dl~~ll~~h~~~~a~~tl~~~~~~ 252 (507)
++++.... |++|++++|+.+.. .++|+++.||+++. .++.++++ .+++++++.+..
T Consensus 68 i~~~~~~~--------~~~g~~~~l~~~~~---------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~ 125 (401)
T 2ggo_A 68 ISIVTQKD--------DIKGTGAAILSAKF---------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS 125 (401)
T ss_dssp CEEEECCT--------TCCBSTTTGGGCCC---------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS
T ss_pred EEEEeCCC--------CCCChHHHHHHhcc---------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC
Confidence 34443211 23699999876631 37899999999886 55666665 457888888876
Q ss_pred CCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC---CC
Q 010554 253 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP---TS 329 (507)
Q Consensus 253 ~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~---~~ 329 (507)
+ +..|+++..+++|++..+.|||..+ .+++.++|+|+|++++|.. ++...+ ..
T Consensus 126 ~--~~~~~~v~~~~~g~v~~~~ek~~~~---------------------~~~~~~~Giy~~~~~~~~~-l~~~~~~~~~~ 181 (401)
T 2ggo_A 126 N--PKDYGVLVLDNQNNLSKIIEKPEIP---------------------PSNLINAGIYKLNSDIFTY-LDKISISERGE 181 (401)
T ss_dssp C--CSSSCEEEECTTSSEEEEECSCSSC---------------------SCSEEEEEEEEEETHHHHH-HHHSCCCSSSC
T ss_pred C--CcceeEEEECCCCeEEEEEECCCCC---------------------CCcEEEEEEEEEcHHHHHH-hhhcCcCCCCc
Confidence 5 4578989888889999999998543 2368999999999999864 454322 12
Q ss_pred CchhhhhHHhhhhc-CcEEEEEeccEEEecCCHHHHHHHHHHhhccCCCccccCCCCCcccCCCcCCCceec-------c
Q 010554 330 NDFGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRFLPPTKID-------N 401 (507)
Q Consensus 330 ~d~~~dil~~li~~-~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~~~~~~~~~~~~i~~~~~~~~p~~i~-------~ 401 (507)
.+ ..++++.+ .. .+++++..+++|.||+||+||..|++.+++++... .....+++.+.+.+++.++ +
T Consensus 182 ~~-~~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~---~~~~~i~~~~~i~~~~~ig~~~~I~~~ 256 (401)
T 2ggo_A 182 LE-LTDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFS---QNLGNVEDNVKIKGKVIIEEDAEIKSG 256 (401)
T ss_dssp BC-HHHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCC---EECSEECSSCEEESCEEECTTCEECTT
T ss_pred eE-HHHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccc---cccceeCCCCEEcCCeEEcCCCEECCC
Confidence 23 45778777 44 68999999999999999999999999998765311 1123344444444444443 2
Q ss_pred eeee-ceEEcCCcEEc-cceEe-eeeE---EeeccCceEe-eeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEec
Q 010554 402 CRIK-DAIISHGCFLR-ECTVE-HSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 402 ~~I~-~siIg~gc~I~-~~~I~-~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~ 472 (507)
+.|. ++.||++|.|+ +|.|. +++| +.+|.++.|. ++++++ +.||+++.|.+|+||+++.||.++.|.+
T Consensus 257 ~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~---~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~ 331 (401)
T 2ggo_A 257 TYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEG---SKIPHLSYVGDSVIAEDVNFGAGTLIAN 331 (401)
T ss_dssp CEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTT---CEEEESCEEESCEECTTCEECTTCEECC
T ss_pred CEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCC---cEECCCceEcceEECCCcEECCCcEEcC
Confidence 4443 46778888886 56665 4555 3678888884 899999 8999999999999999999999999984
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=4.1e-40 Score=350.85 Aligned_cols=360 Identities=18% Similarity=0.247 Sum_probs=243.3
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCe
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 174 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~ 174 (507)
-+|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++. .+
T Consensus 12 ~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~-----~~------- 75 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLA-----GQ------- 75 (468)
T ss_dssp EEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSS-----SS-------
T ss_pred CcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhC-----CC-------
Confidence 4799999999999985 789999999999 9999999999999999999999998777755442 11
Q ss_pred EEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEEEcC
Q 010554 175 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAVG 252 (507)
Q Consensus 175 V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~~~~ 252 (507)
++++... +.+||+++|+.++.++++ ..++|++++||+ +...++.++++.|++.++++++++.+..
T Consensus 76 i~~v~~~---------~~~G~~~sl~~a~~~~~~----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~ 142 (468)
T 1hm9_A 76 TEFVTQS---------EQLGTGHAVMMTEPILEG----LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD 142 (468)
T ss_dssp SEEEECS---------SCCCHHHHHHTTHHHHTT----CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS
T ss_pred cEEEeCC---------ccCChHHHHHHHHHHhcc----CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC
Confidence 3333211 236999999999888741 247899999999 5678899999999999999999888876
Q ss_pred CCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC---C
Q 010554 253 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT---S 329 (507)
Q Consensus 253 ~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~---~ 329 (507)
+ +..||++..|++|+|..|.|||..... ....+++++|+|+|+++.|.++++...+. .
T Consensus 143 ~--~~~~g~v~~d~~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~ 203 (468)
T 1hm9_A 143 N--PFGYGRIVRNDNAEVLRIVEQKDATDF-----------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQG 203 (468)
T ss_dssp C--CTTSCEEEECTTCCEEEEECTTTCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTC
T ss_pred C--CCceeEEEECCCCCEEEEEECCCCChH-----------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCCC
Confidence 5 557999999988999999998752110 00237899999999999776776653332 2
Q ss_pred CchhhhhHHhhhhc-CcEEEEEeccEEEe--cCCHHHHHHHHHHhhccC------CCccccC-------CCCC-------
Q 010554 330 NDFGSEIIPAAIME-HDVQAYIFRDYWED--IGTIKSFYEANMALTKES------PAFHFYD-------PKTP------- 386 (507)
Q Consensus 330 ~d~~~dil~~li~~-~~V~~~~~~gyw~d--Igt~~~y~~An~~ll~~~------~~~~~~~-------~~~~------- 386 (507)
..+.+++++.+++. .++++|.+++||.+ |+|+++|..|+..+..+. +...+++ +...
T Consensus 204 ~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i 283 (468)
T 1hm9_A 204 EYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQI 283 (468)
T ss_dssp SCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEE
T ss_pred eEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEE
Confidence 34568899988876 58999999999977 559999999997664321 1111112 1111
Q ss_pred -----cccCCCcCCCceec-ceeeeceEEcCCcEEccceEeeeeE---EeeccCceEe--eeecCCCcceeeCCCcEEe-
Q 010554 387 -----FYTSPRFLPPTKID-NCRIKDAIISHGCFLRECTVEHSIV---DYYQTESEIA--SLLAEGKVPIGVGRNTKIR- 454 (507)
Q Consensus 387 -----i~~~~~~~~p~~i~-~~~I~~siIg~gc~I~~~~I~~Sii---~~vg~~~~i~--s~l~~g~~~~~Ig~~~~I~- 454 (507)
+...+.+.+.+.|+ ++.|.++.||++|.|+++.|.+++| ..+|.++.|. ++++++ +.||+++.|.
T Consensus 284 ~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~---~~Ig~~~~i~~ 360 (468)
T 1hm9_A 284 EANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQ---VHIGNFVEVKG 360 (468)
T ss_dssp CSSCEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTT---CEEEEEEEEES
T ss_pred CCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCc---cEECCCcEEee
Confidence 12222222333333 3555566666666666555666655 2445555542 444444 4444433333
Q ss_pred ----------------eeEeCCCCEECCCcEEecCC-------CCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 455 ----------------NCIIDKNVKIGKDVVIVNKD-------DVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 455 ----------------nsIIg~na~Ig~~~~i~~~~-------~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+++||+|+.||.++++.+.+ .+++...+..+..|.+| +.||++++|++|++
T Consensus 361 ~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~-v~Ig~~~~i~~~s~ 434 (468)
T 1hm9_A 361 SSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAP-VELGDNSLVGAGST 434 (468)
T ss_dssp CEECTTCEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESS-CEECTTCEECTTCE
T ss_pred eEEcCCcEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCC-cEECCCCEECCCCE
Confidence 34556666666666665522 23333333333333344 45666666666665
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=2.2e-38 Score=336.39 Aligned_cols=360 Identities=16% Similarity=0.225 Sum_probs=238.8
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
.+|.|||||||.|+||+| .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+.+.+++.+ .+
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~--------~~- 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLAD--------PS- 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc--------CC-
Confidence 368999999999999997 799999999999 99999999999999999999999988877766641 11
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAA 250 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~~ 250 (507)
++++. +. +.+||+++++.++.+++ ..++|++++||+ +...++.++++.|++ .++++++.+
T Consensus 74 --~~~v~--~~-------~~~g~~~~i~~~~~~~~-----~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~ 135 (459)
T 4fce_A 74 --LNWVL--QA-------EQLGTGHAMQQAAPHFA-----DDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVK 135 (459)
T ss_dssp ---CEEE--CS-------SCCCHHHHHHHHGGGSC-----TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEE
T ss_pred --cEEEe--CC-------CCCCcHHHHHHHHHhcC-----CCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEe
Confidence 33432 11 23699999999977664 247999999999 567789999998865 567777777
Q ss_pred cCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC---
Q 010554 251 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP--- 327 (507)
Q Consensus 251 ~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~--- 327 (507)
..+ +..|+++..| +|+|..+.|||..... ....+++++|+|+|+++.|.++++...+
T Consensus 136 ~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~ 195 (459)
T 4fce_A 136 LDN--PSGYGRIVRE-NGDVVGIVEHKDASDA-----------------QREINEINTGILVANGRDLKRWLSLLDNNNA 195 (459)
T ss_dssp CSC--CTTSCEEEEE-TTEEEEEECGGGCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHHTCCCCST
T ss_pred cCC--CCcccEEEeC-CCcEEEEEECCCCChH-----------------HhhccEEEEEEEEEEHHHHHHHHHHhCcccc
Confidence 665 5679998887 7999999998743211 0124789999999999988777775432
Q ss_pred CCCchhhhhHHhhhhc-CcEEEEEeccEE--EecCCHHHHHHHHHHhhccC------CCccccCC-------CCCcccCC
Q 010554 328 TSNDFGSEIIPAAIME-HDVQAYIFRDYW--EDIGTIKSFYEANMALTKES------PAFHFYDP-------KTPFYTSP 391 (507)
Q Consensus 328 ~~~d~~~dil~~li~~-~~V~~~~~~gyw--~dIgt~~~y~~An~~ll~~~------~~~~~~~~-------~~~i~~~~ 391 (507)
....+..++++.+++. .++++|..++|| .+|+||+||..|+..+..+. +...+.+| ...+...+
T Consensus 196 ~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~ 275 (459)
T 4fce_A 196 QGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDI 275 (459)
T ss_dssp TCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSC
T ss_pred CCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCc
Confidence 2334567888887766 689999999876 67999999999987654332 00111111 11111222
Q ss_pred CcCCC------------ceec-ceeeeceEEcCCcEEc-cceEeeeeE---EeeccCceEe-------------------
Q 010554 392 RFLPP------------TKID-NCRIKDAIISHGCFLR-ECTVEHSIV---DYYQTESEIA------------------- 435 (507)
Q Consensus 392 ~~~~p------------~~i~-~~~I~~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~------------------- 435 (507)
.+.|. +.|+ ++.|.++.||++|.|+ +|.|.+++| ..+|.++.|.
T Consensus 276 ~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~ 355 (459)
T 4fce_A 276 TIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKK 355 (459)
T ss_dssp EECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEE
T ss_pred EECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEee
Confidence 22222 2222 2444556666666665 455555555 1233333331
Q ss_pred eeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEecCCCC-------ccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 436 SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDV-------QEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~~~~~-------~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
+.++++ +.|++++.|.+++||+++.||+++++.+.+++ ++..-...+..|.+| +.||++++|++|+++
T Consensus 356 ~~i~~~---~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~g-v~Ig~~~~igagsvV 430 (459)
T 4fce_A 356 ARLGKG---SKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAP-VTVANGATIGAGTTV 430 (459)
T ss_dssp EEECTT---CEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESS-EEECTTCEECTTCEE
T ss_pred eEEcCC---CEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCC-cEECCCCEECCCCEE
Confidence 333333 33444444456677777778888777764333 333333344444445 556777777766653
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=2.3e-37 Score=328.26 Aligned_cols=327 Identities=18% Similarity=0.256 Sum_probs=235.4
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
+.++.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++.+ ++
T Consensus 3 ~~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~--------~~ 70 (456)
T 2v0h_A 3 KKALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLAN--------EQ 70 (456)
T ss_dssp -CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTT--------CC
T ss_pred CCcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhc--------CC
Confidence 3468999999999999985 689999999999 99999999999999999999999987777766631 11
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCA 249 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~ 249 (507)
++++... +.+||+++++.++.+++ ..++|++++||+ +...++.++++.|++ +++++++.
T Consensus 71 ---~~~v~~~---------~~~g~~~~~~~~~~~~~-----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 131 (456)
T 2v0h_A 71 ---VNWVLQT---------EQLGTAHAVQQAAPFFK-----DNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTV 131 (456)
T ss_dssp ---CEEEECS---------CCCCHHHHHHHHGGGCC-----TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEeCC---------CCCCcHHHHHHHHHhcC-----CCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEe
Confidence 3443211 13699999999876663 147899999999 556789999998876 57888887
Q ss_pred EcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC-
Q 010554 250 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT- 328 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~- 328 (507)
+.++ +..|+.+..| +|++..+.|||..... ....+++++|+|+|+++.|.++++...+.
T Consensus 132 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 191 (456)
T 2v0h_A 132 NLDN--PTGYGRIIRE-NGNVVAIVEQKDANAE-----------------QLNIKEVNTGVMVSDGASFKKWLARVGNNN 191 (456)
T ss_dssp ECSS--CTTSCEEEEE-TTEEEEEECTTTCCHH-----------------HHTCCEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ecCC--CCccceEEEc-CCcEEEEEECCCCChh-----------------HhcCcEEEEEEEEEEHHHHHHHHHHhcccc
Confidence 7765 5668988887 7899999998753210 01236899999999999877777643322
Q ss_pred --CCchhhhhHHhhhhc-CcEEEEEeccE--EEecCCHHHHHHHHHHhhccC------CCccccCCC-CCcccCCCcCCC
Q 010554 329 --SNDFGSEIIPAAIME-HDVQAYIFRDY--WEDIGTIKSFYEANMALTKES------PAFHFYDPK-TPFYTSPRFLPP 396 (507)
Q Consensus 329 --~~d~~~dil~~li~~-~~V~~~~~~gy--w~dIgt~~~y~~An~~ll~~~------~~~~~~~~~-~~i~~~~~~~~p 396 (507)
...+..++++.++.. .++++|..+++ |.+|+||+||..|++.+..+. +...+.++. ..+...+.+.+.
T Consensus 192 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~ 271 (456)
T 2v0h_A 192 AQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKD 271 (456)
T ss_dssp TTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSS
T ss_pred ccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCC
Confidence 233467888887765 58999999765 569999999999998765432 111122221 122233344455
Q ss_pred ceec-ceeee-ceEEcCCcEEc-cceEeeeeE---EeeccCceEe-eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCc
Q 010554 397 TKID-NCRIK-DAIISHGCFLR-ECTVEHSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDV 468 (507)
Q Consensus 397 ~~i~-~~~I~-~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~ 468 (507)
+.|+ ++.|. ++.||++|.|+ ++.|++++| +.++.++.|. +.++++ +.||++++|. +++||+++.||+++
T Consensus 272 ~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~---~~I~~~~~i~~~~~ig~~~~ig~~~ 348 (456)
T 2v0h_A 272 VEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEK---AAIGPFSRLRPGAELAAETHVGNFV 348 (456)
T ss_dssp CEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTT---CEECSSEEECTTCEECTTCEEEEEE
T ss_pred CEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCC---cEECCccEECCCCEECCCCEECCCC
Confidence 5555 36663 67888888887 677887777 3566666663 666776 6777777776 67777777777666
Q ss_pred EEec
Q 010554 469 VIVN 472 (507)
Q Consensus 469 ~i~~ 472 (507)
.|.+
T Consensus 349 ~i~~ 352 (456)
T 2v0h_A 349 EIKK 352 (456)
T ss_dssp EEES
T ss_pred EEec
Confidence 6653
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=7e-37 Score=304.82 Aligned_cols=243 Identities=19% Similarity=0.280 Sum_probs=197.1
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcc-cCCCcc---
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-FGNGTN--- 169 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~-~~~~~~--- 169 (507)
.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+|+++.++|+++|+|+++++.+++.+|+.+.+ +.....
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 80 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN 80 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CC
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhccc
Confidence 37999999999999999999999999999999 9999999999999999999999999999998886432 111000
Q ss_pred ------------cCCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-----HHH
Q 010554 170 ------------FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-----YMD 232 (507)
Q Consensus 170 ------------~~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-----l~~ 232 (507)
++ ..+.++ .+. +++||+++|+.++.++. .++|+|++||++++.+ +.+
T Consensus 81 ~~~~~~~~~~~~~~-~~i~~~--~~~-------~~~Gt~~al~~a~~~l~------~~~~lv~~~D~~~~~~~~~~~l~~ 144 (281)
T 3juk_A 81 KENALKSIRNIIEK-CCFSYV--RQK-------QMKGLGHAILTGEALIG------NEPFAVILADDLCISHDHPSVLKQ 144 (281)
T ss_dssp HHHHHHHHHHHHHH-CEEEEE--ECS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEEECTTSCCHHHH
T ss_pred chhhhhhhhccccC-ccEEEE--ecC-------CCCCcHHHHHHHHHHcC------CCCEEEEeCCeeccCccchHHHHH
Confidence 11 123333 221 24799999999998884 3789999999999998 999
Q ss_pred HHHHHHHcCCceEEEEEEcCCCCCccceEEEECC--CC--cEEEEEeCCCccccccccccccccCCCccccccCCceeee
Q 010554 233 FIQSHVDRDADITISCAAVGESRASDYGLVKIDN--MG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASM 308 (507)
Q Consensus 233 ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id~--~g--rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (507)
+++.|++.++ .++++..++.+.+..||++..|+ +| +|..|.|||..... .++++++
T Consensus 145 l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~ 204 (281)
T 3juk_A 145 MTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVI 204 (281)
T ss_dssp HHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEE
Confidence 9999998887 78888887666678999999986 78 99999999973211 2478999
Q ss_pred EEEEEeHHHHHHHHHhhCCC--CCchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhcc
Q 010554 309 GVYVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKE 374 (507)
Q Consensus 309 Giyif~~~iL~~ll~~~~~~--~~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~ 374 (507)
|+|+|++++|. .++...+. ......++++.+++++++++|.+++||.|||||++|++|++.+++.
T Consensus 205 GiYi~~~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 205 GRYILTPDIFE-ILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp EEEEECTTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHH-HHHhcCCCCCCceeHHHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99999999985 45543221 1223488999999888999999999999999999999999998864
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.6e-34 Score=286.28 Aligned_cols=237 Identities=19% Similarity=0.328 Sum_probs=194.1
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccC-chHHHHHHHhcccCCCccc
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFN-SASLNRHIARTYFGNGTNF 170 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~-~~~l~~~l~~~~~~~~~~~ 170 (507)
.+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|++++|.++|+++|+|++++. .+++.+++.. +..|
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~-----~~~~ 95 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS-----GQEF 95 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-----SGGG
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh-----cccc
Confidence 4568999999999999999999999999999999 9999999999999999999999975 4677777742 2234
Q ss_pred CCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCCHHHHHHHHHHcCCceEEEEEE
Q 010554 171 GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAA 250 (507)
Q Consensus 171 ~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ll~~h~~~~a~~tl~~~~ 250 (507)
+. .+.+.. +. +..||+++|+.+..+++ .++|+|++||++++.++.++++.|+++++++++++.+
T Consensus 96 ~~-~i~~~~--~~-------~~~G~~~al~~a~~~~~------~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~ 159 (269)
T 4ecm_A 96 GV-SFTYRV--QD-------KAGGIAQALGLCEDFVG------NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQS 159 (269)
T ss_dssp TC-EEEEEE--CS-------SCCCHHHHHHTTHHHHT------TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEE
T ss_pred Cc-eEEEee--CC-------ccCcHHHHHHHHHHhcC------CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEE
Confidence 31 133322 21 23699999999988874 4799999999999999999999999999999999988
Q ss_pred cCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC--C
Q 010554 251 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP--T 328 (507)
Q Consensus 251 ~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~--~ 328 (507)
+++ +..||++..|+ |+|+.|.|||..+. ++++++|+|+|++++|. .++...+ .
T Consensus 160 ~~~--~~~~g~v~~d~-g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~~ 214 (269)
T 4ecm_A 160 VDD--PERFGVANIQN-RKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSAR 214 (269)
T ss_dssp CSC--GGGSEEEEEET-TEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCTT
T ss_pred CCC--CCCceEEEEcC-CEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCCC
Confidence 776 56899999874 99999999985432 36899999999999884 4553322 1
Q ss_pred CCchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhccC
Q 010554 329 SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKES 375 (507)
Q Consensus 329 ~~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~ 375 (507)
......++++.+++++++.+|.++++|.|||||++|.+|++.+++..
T Consensus 215 ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 215 GELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp SCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred CeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 22335789999998889999999999999999999999999987643
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=2.6e-33 Score=282.01 Aligned_cols=244 Identities=22% Similarity=0.289 Sum_probs=190.8
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcc-cC-----
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-FG----- 165 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~-~~----- 165 (507)
++.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.+ +.
T Consensus 6 ~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 84 (302)
T 2e3d_A 6 TKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEK 84 (302)
T ss_dssp CSCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC-
T ss_pred hcccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhh
Confidence 3468999999999999999999999999999999 9999999999999999999999999899988885321 00
Q ss_pred CCc-----------ccCCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccC------
Q 010554 166 NGT-----------NFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRM------ 228 (507)
Q Consensus 166 ~~~-----------~~~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~------ 228 (507)
.+. .++ ..+.++. +. +..||++||+.++.++. .++|+|++||++++.
T Consensus 85 ~~~~~~l~~~~~~~~~~-~~i~~~~--~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~~~ 148 (302)
T 2e3d_A 85 RVKRQLLDEVQSICPPH-VTIMQVR--QG-------LAKGLGHAVLCAHPVVG------DEPVAVILPDVILDEYESDLS 148 (302)
T ss_dssp ---CHHHHHHHHTSCTT-CEEEEEE--CS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEECTTSSCTT
T ss_pred ccchhhhhhhhhccccC-cceEEee--CC-------ccCCHHHHHHHHHHHcC------CCcEEEEcCCccccCccccch
Confidence 000 011 1233332 21 24699999999988874 378999999999873
Q ss_pred --CHHHHHHHHHHcCCceEEEEEEcCCCCCccceEEEEC----CCC---cEEEEEeCCCccccccccccccccCCCcccc
Q 010554 229 --DYMDFIQSHVDRDADITISCAAVGESRASDYGLVKID----NMG---RIAQFAEKPSGANLKAMQVDTSLLGFSPQEA 299 (507)
Q Consensus 229 --dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id----~~g---rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~ 299 (507)
++.++++.|++.++ +|+++.+..+ +..||++..+ ++| +|..|.|||.....
T Consensus 149 ~~~l~~l~~~~~~~~~-~~i~~~~~~~--~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~----------------- 208 (302)
T 2e3d_A 149 QDNLAEMIRRFDETGH-SQIMVEPVAD--VTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA----------------- 208 (302)
T ss_dssp TSTHHHHHHHHHHHCC-EEEEEEECSC--GGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC-----------------
T ss_pred HHHHHHHHHHHHhcCC-cEEEEEEccC--CCCccEEEecccccCCCCceeEEEEEECCCCCcc-----------------
Confidence 79999999988877 7888777643 5789999874 567 89999999863211
Q ss_pred ccCCceeeeEEEEEeHHHHHHHHHhhCCC--CCchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhccC
Q 010554 300 RKCPYVASMGVYVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKES 375 (507)
Q Consensus 300 ~~~~~l~~~Giyif~~~iL~~ll~~~~~~--~~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~ 375 (507)
.++++++|+|+|++++|. .++...+. ...+..++++.+++++++++|.++++|.|||||++|++|++.++.+.
T Consensus 209 --~~~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~~ 283 (302)
T 2e3d_A 209 --PSNLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRH 283 (302)
T ss_dssp --SCSEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHHC
T ss_pred --ccceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhcC
Confidence 236899999999999885 45543332 12335788888887789999999999999999999999997776443
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=2.1e-33 Score=282.03 Aligned_cols=246 Identities=19% Similarity=0.258 Sum_probs=173.7
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcc-c-----CC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-F-----GN 166 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~-~-----~~ 166 (507)
..|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.+ + ..
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 91 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAAR 91 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTT
T ss_pred CccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhc
Confidence 458999999999999999999999999999999 9999999999999999999999999888988875321 0 00
Q ss_pred C---------cccCCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceecc---CCHHHHH
Q 010554 167 G---------TNFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYR---MDYMDFI 234 (507)
Q Consensus 167 ~---------~~~~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~---~dl~~ll 234 (507)
+ ..++ ..+.++. +. +.+||+++++.++.++. .++|+|++||++++ .++.+++
T Consensus 92 ~~~~~~~~~~~~~g-~~i~~~~--~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~l~~l~ 155 (297)
T 2ux8_A 92 GKSLDVLDGTRLKP-GNIAYVR--QQ-------EPMGLGHAVWCARDIVG------DEPFAVLLPDDFMFGQPGCLKQMV 155 (297)
T ss_dssp TCCGGGGTTSCCST-TSEEEEE--CC-------SCCCHHHHHHTTHHHHC------SSCEEEECTTEEEESSSCHHHHHH
T ss_pred cchhhhhhhcccCC-CceEEEe--CC-------CCCChHHHHHHHHHHcC------CCcEEEEeCCeecCCChHHHHHHH
Confidence 0 0011 1244442 21 23699999999988774 37899999999987 5799999
Q ss_pred HHHHHcCCceEEEEEEcCCCCCccceEEEECC--CC--cEEEEEeCCCccccccccccccccCCCccccccCCceeeeEE
Q 010554 235 QSHVDRDADITISCAAVGESRASDYGLVKIDN--MG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGV 310 (507)
Q Consensus 235 ~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id~--~g--rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 310 (507)
+.|++.++ .++++.+++.+.+..||++..|+ +| +|..|.|||..... .++++++|+
T Consensus 156 ~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~Gi 215 (297)
T 2ux8_A 156 DAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVIGR 215 (297)
T ss_dssp HHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEEEE
T ss_pred HHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEEEE
Confidence 99988776 57777665444456799887663 55 89999999853211 136899999
Q ss_pred EEEeHHHHHHHHHhhCCC--CCchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhccCC
Q 010554 311 YVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKESP 376 (507)
Q Consensus 311 yif~~~iL~~ll~~~~~~--~~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~~ 376 (507)
|+|++++|. .++...+. ...+..++++.+++++++++|.++++|.|||||++|.+|++.++...+
T Consensus 216 yi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~~ 282 (297)
T 2ux8_A 216 YILQPEVMR-ILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSRP 282 (297)
T ss_dssp EEECTHHHH-HHHHTC--------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHCT
T ss_pred EEECHHHHH-HHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcCh
Confidence 999999875 44543332 112246788888888899999999999999999999999988876544
No 12
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=1.3e-32 Score=270.02 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=179.8
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhccc-CCCccc--
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYF-GNGTNF-- 170 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~-~~~~~~-- 170 (507)
+|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+.+.+|+.+.+. ..+..+
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 37899999999999999999999999999999 99999999999999999999999999999988864210 000000
Q ss_pred CCCeEEEecCccCCCC---CCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCCHHHHHHHHHHcCCceEEE
Q 010554 171 GDGFVEVLAATQTPGE---SGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITIS 247 (507)
Q Consensus 171 ~~~~V~vl~~~q~~~~---~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ll~~h~~~~a~~tl~ 247 (507)
+...++++.....+.+ ..+....||+++|+.++.+++ ..++|++++||++++.++.++++.|++.++++|+.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~-----~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~ 155 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVK-----DDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLT 155 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTT-----TSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEE
T ss_pred cccceeeeeccccccceeeeecccccCcHHHHHHHHHhcC-----CCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEE
Confidence 0001223211000000 000113699999999887663 24789999999999999999999999888888775
Q ss_pred EEEcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC
Q 010554 248 CAAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 327 (507)
Q Consensus 248 ~~~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~ 327 (507)
.. .. +..||++.+| +|+|..|.|||... .+++++|+|+|++++|.. ++.
T Consensus 156 ~~--~~--~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~~-l~~--- 204 (259)
T 1tzf_A 156 AT--FP--PGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVIDL-IDN--- 204 (259)
T ss_dssp EE--CC--CCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGGG-CCS---
T ss_pred Ee--cC--CCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHHh-hcc---
Confidence 43 22 4679999888 79999999998632 258899999999998842 221
Q ss_pred CCCchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhccC
Q 010554 328 TSNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKES 375 (507)
Q Consensus 328 ~~~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~ 375 (507)
...+|..++++.+++++++++|.++++|.||||+++|.++++.+....
T Consensus 205 ~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~ 252 (259)
T 1tzf_A 205 DATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKGK 252 (259)
T ss_dssp TTCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhcCC
Confidence 223455788888888889999999999999999999999999987643
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=2.3e-32 Score=277.81 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=188.8
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcc-cCC-----
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-FGN----- 166 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~-~~~----- 166 (507)
+.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...+ |..
T Consensus 11 ~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 11 AVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp -CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred cceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 458999999999999999999999999999999 9999999999999999999999999888887764211 000
Q ss_pred C--------cc--cCCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCe--EEEEcCceecc--CCHHH
Q 010554 167 G--------TN--FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIEN--VAILCGDHLYR--MDYMD 232 (507)
Q Consensus 167 ~--------~~--~~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~--~lVl~gD~i~~--~dl~~ 232 (507)
+ .. ++ ..+.++. +. +.+||+++|+.++.++. .++ |+|++||++++ .++.+
T Consensus 90 ~~~~~~~~~~~~~~g-~~i~~~~--~~-------~~~Gt~~al~~a~~~l~------~~~d~~lv~~~D~~~~~~~~l~~ 153 (323)
T 2pa4_A 90 GKTDQVEIIRRAADL-IKAVPVT--QD-------KPLGLGHAVGLAESVLD------DDEDVVAVMLPDDLVLPTGVMER 153 (323)
T ss_dssp TCHHHHHHTTHHHHH-CEEEEEE--CS-------SCCCHHHHHHTTGGGSC------SSCCEEEEECTTEEEESSCHHHH
T ss_pred chhhhhhhhhccccC-cceEEEe--CC-------ccCCcHHHHHHHHHHhc------CCCCeEEEEeCCcccCchHHHHH
Confidence 0 00 11 1243332 21 23699999999876663 244 99999999987 67999
Q ss_pred HHHHHHHcCCceEEEEEEcCCCCCccceEEEEC----CCC--cEEEEEeCCCccccccccccccccCCCccccccCCcee
Q 010554 233 FIQSHVDRDADITISCAAVGESRASDYGLVKID----NMG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVA 306 (507)
Q Consensus 233 ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id----~~g--rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (507)
+++.|++.++ .++++.+++.+.+..||++..| +++ +|..|.|||..... .++++
T Consensus 154 l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~ 213 (323)
T 2pa4_A 154 MAQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLA 213 (323)
T ss_dssp HHHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEE
T ss_pred HHHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEE
Confidence 9999988776 5777777654446789999886 554 99999999853211 23689
Q ss_pred eeEEEEEeHHHHHHHHHhhCCC--CCchhhhhHHhhhhc-CcEEEEEeccEEEecCCHHHHHHHHHHhhccCC
Q 010554 307 SMGVYVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKESP 376 (507)
Q Consensus 307 ~~Giyif~~~iL~~ll~~~~~~--~~d~~~dil~~li~~-~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~~ 376 (507)
++|+|+|++++|.. ++...+. ...+..++++.++++ .++++|.++++|.|||||++|.+|++.++...+
T Consensus 214 ~~GiY~~~~~~~~~-l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~~ 285 (323)
T 2pa4_A 214 ATGRYLLDRKIFDA-LRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSHP 285 (323)
T ss_dssp EEEEEEEETHHHHH-HHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTCT
T ss_pred EEEEEEECHHHHHH-HHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcCh
Confidence 99999999998854 4443332 122247889888877 799999999999999999999999988875443
No 14
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=100.00 E-value=2.5e-32 Score=268.51 Aligned_cols=229 Identities=11% Similarity=0.115 Sum_probs=173.0
Q ss_pred EEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHh-cCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCeE
Q 010554 97 AIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCIN-SGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFV 175 (507)
Q Consensus 97 aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~-~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V 175 (507)
+||||||.||||+|+|..+||||+||+|+ |||+|+|++|.+ +|+++|+|++++..+ +.+++.+.. . +++...+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~-~---~~~~~~~ 75 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKA-T---QLGIKQF 75 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHH-H---HHTCSSE
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHH-H---HcCCCCc
Confidence 79999999999999999999999999999 999999999999 799999999998876 555654322 0 1111112
Q ss_pred EEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-cCCHHHHHHHHHHcCCceEEEEEEcCCC
Q 010554 176 EVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAVGES 254 (507)
Q Consensus 176 ~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 254 (507)
.++. .|. +.+||++|++.++.++.+.....+++|+|++||+++ +.++.++ ..+++.++++.++++
T Consensus 76 ~~~~-~~~-------~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~- 141 (255)
T 4evw_A 76 YIAE-LHT-------ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGG- 141 (255)
T ss_dssp EEEE-ESS-------CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCS-
T ss_pred eEEE-eCC-------CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCC-
Confidence 2221 121 247999999999988831000124789999999998 5666543 256778999988865
Q ss_pred CCccceEEEECCCC--cEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHH-HHHHHH----HhhCC
Q 010554 255 RASDYGLVKIDNMG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKD-VLFKLL----RWRYP 327 (507)
Q Consensus 255 ~~~~~g~v~id~~g--rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~-iL~~ll----~~~~~ 327 (507)
+ .||++..|++| +|++|.||+.. ++++++|+|+|++. .|.+.+ ++..+
T Consensus 142 -p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~ 196 (255)
T 4evw_A 142 -D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVARPSQ 196 (255)
T ss_dssp -S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTSCGG
T ss_pred -C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhcccc
Confidence 3 79999999888 99999999431 36899999999986 343333 22221
Q ss_pred ---CCCchhhhhHHhhhhc-CcEEEEEec-cEEEecCCHHHHHHHHHH
Q 010554 328 ---TSNDFGSEIIPAAIME-HDVQAYIFR-DYWEDIGTIKSFYEANMA 370 (507)
Q Consensus 328 ---~~~d~~~dil~~li~~-~~V~~~~~~-gyw~dIgt~~~y~~An~~ 370 (507)
....+.+++++.++++ .+|.+|.++ ++|.|||||++|.++...
T Consensus 197 ~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~ 244 (255)
T 4evw_A 197 EWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQ 244 (255)
T ss_dssp GCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC
T ss_pred cccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhc
Confidence 3345678999999876 579999986 999999999999998753
No 15
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.6e-32 Score=274.06 Aligned_cols=258 Identities=15% Similarity=0.161 Sum_probs=188.2
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceee--cCcchhhHHHHHHHHhcCCCEEEEEeccCc-hHHHHHHHhcccCCCcc
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPV--AGCYRLIDIPMSNCINSGINKIFVLTQFNS-ASLNRHIARTYFGNGTN 169 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI--~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~-~~l~~~l~~~~~~~~~~ 169 (507)
.+|.|||||||.||||+| ||+|+|| +|+ |||+|+++++.++|+++|+|++++.. +++.+|+...+ .
T Consensus 4 m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~-----~ 72 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKY-----E 72 (303)
T ss_dssp CCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHH-----T
T ss_pred CceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHh-----c
Confidence 358999999999999998 6999999 588 99999999999999999999999985 78988887443 1
Q ss_pred cCCCeEEEecCcc-CCCC-----CCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHH---
Q 010554 170 FGDGFVEVLAATQ-TPGE-----SGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVD--- 239 (507)
Q Consensus 170 ~~~~~V~vl~~~q-~~~~-----~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~--- 239 (507)
++ ..++++.... ...+ ....+++||++||+++++++ .++|+|++||++++.+ +.+++++|.+
T Consensus 73 ~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-------~~~~lV~~gD~l~~~~~~~~l~~~~~~~~~ 144 (303)
T 3pnn_A 73 GR-IPVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-------REPFAVINADDFYGRNGFEVLARKLMTLEG 144 (303)
T ss_dssp TT-SCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-------CSCEEEEESSCBCCHHHHHHHHHHHHTTTT
T ss_pred cC-CcEEEEecccccccccccccccccccCCcHHHHHHHHHhc-------CCCEEEEECCeecCHHHHHHHHHHHHHhcc
Confidence 11 1244432110 0000 00013579999999997666 3789999999999886 8999999986
Q ss_pred cCCceEEEEEEcCCCCCccc-----eEEEECCCCcEEEEEeCCCcccccc-ccccccccCCCccccccCCceeeeEEEEE
Q 010554 240 RDADITISCAAVGESRASDY-----GLVKIDNMGRIAQFAEKPSGANLKA-MQVDTSLLGFSPQEARKCPYVASMGVYVF 313 (507)
Q Consensus 240 ~~a~~tl~~~~~~~~~~~~~-----g~v~id~~grV~~~~eKp~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Giyif 313 (507)
+++++|+++.+++++ .+.| |++.+|++|+|+.|.|||....... ...+..- +. ......++++++|+|+|
T Consensus 145 ~~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~~-g~--~~~~~~~~~i~~GiY~f 220 (303)
T 3pnn_A 145 KQGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDET-GK--ICTLAEDAPVSMNMWGF 220 (303)
T ss_dssp CSSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECTT-SC--EEEECTTCEEEEEEEEE
T ss_pred ccCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCccccccccccccc-cc--cccCCCCCEEEEEEEEE
Confidence 578899999988763 1445 6889998999999999996431000 0000000 00 00001247999999999
Q ss_pred eHHHHHHHHH-------hhC--CCCCchhhhhHHhhhhcC--cEEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010554 314 KKDVLFKLLR-------WRY--PTSNDFGSEIIPAAIMEH--DVQAYIFRDYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 314 ~~~iL~~ll~-------~~~--~~~~d~~~dil~~li~~~--~V~~~~~~gyw~dIgt~~~y~~An~~ll~ 373 (507)
++++|..+.+ +.. .....++.++++.+++++ +|++|.++++|.|||||++|.+|+..+.+
T Consensus 221 ~~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 221 TPDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp CTHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 9999865432 111 223345788999998886 79999999999999999999999988764
No 16
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.98 E-value=4.3e-31 Score=264.90 Aligned_cols=233 Identities=25% Similarity=0.392 Sum_probs=186.3
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEe-ccCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLT-QFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~-~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
+|+|||||||.||||+|+|..+||+|+||+|+ |||+|++++|..+|+++|+|++ .+..+.+.+++.+ +.+|+.
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~-----g~~~g~ 75 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGD-----GSNWGL 75 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-----SGGGTC
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhc-----ccccCc
Confidence 48999999999999999999999999999999 9999999999999999999887 4566777777742 333441
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-cCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
.+.+. .|. .+.|+++|++.+..++. .++++++.||+++ +.++.++++.|.+.++++++++.++
T Consensus 76 -~i~~~--~~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v 139 (293)
T 1fxo_A 76 -DLQYA--VQP-------SPDGLAQAFLIGESFIG------NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV 139 (293)
T ss_dssp -EEEEE--ECS-------SCCCGGGHHHHTHHHHT------TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEEC
T ss_pred -eEEEe--eCC-------CCCCHHHHHHHHHHHhC------CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEEC
Confidence 23333 222 13699999999988874 3789999999865 6789999999987777888888877
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC--C
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--S 329 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~--~ 329 (507)
.+ +..||++.+|++|+|..|.|||..+. ++++++|+|+|++++|..+ +...+. .
T Consensus 140 ~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~~-~~~~~~~~g 195 (293)
T 1fxo_A 140 LD--PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVDIA-RDLKPSPRG 195 (293)
T ss_dssp SC--GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHHHH-HHCCCCTTS
T ss_pred CC--cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHHHH-HhcCcccCC
Confidence 66 66899999999999999999985332 3689999999999998644 433322 1
Q ss_pred CchhhhhHHhhhhcCcEEEEEec-cE-EEecCCHHHHHHHHHHhh
Q 010554 330 NDFGSEIIPAAIMEHDVQAYIFR-DY-WEDIGTIKSFYEANMALT 372 (507)
Q Consensus 330 ~d~~~dil~~li~~~~V~~~~~~-gy-w~dIgt~~~y~~An~~ll 372 (507)
.-..+++++.+++.+++.++... +| |.||||++||.+|+..+.
T Consensus 196 e~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 196 ELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp SCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred ceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 12247888888888888888875 75 999999999999998764
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.98 E-value=5e-31 Score=264.64 Aligned_cols=233 Identities=21% Similarity=0.350 Sum_probs=185.9
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEec-cCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQ-FNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~-~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++.|..+|+++|+|+++ +..+.+.+++.+ +.+|+.
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~-----g~~~g~ 76 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGD-----GSQFGV 76 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-----SGGGTS
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhh-----ccccCc
Confidence 37999999999999999999999999999999 99999999999999999999885 667778777742 233441
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-cCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
.+.++. +. .+.|+++|++.+..++. .++++++.||+++ +.++.++++.|.+.++++++++.++
T Consensus 77 -~i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v 140 (295)
T 1lvw_A 77 -RFSYRV--QE-------EPRGIADAFIVGKDFIG------DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYV 140 (295)
T ss_dssp -EEEEEE--CS-------SCCCGGGHHHHTHHHHT------TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEEC
T ss_pred -eEEEee--CC-------CCCChHHHHHHHHHHhC------CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEEC
Confidence 233332 22 13699999999988874 3678888899865 6789999999987777788888887
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC--C
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--S 329 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~--~ 329 (507)
.+ +..||++.+|++|+|..|.|||..+. ++++++|+|+|++++|..+ +...+. .
T Consensus 141 ~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~~-~~~~~~~~g 196 (295)
T 1lvw_A 141 RD--PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEIA-RRIEPSDRG 196 (295)
T ss_dssp SC--CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHHH-HHCCCCTTS
T ss_pred CC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHHH-HhcCCcccC
Confidence 76 55799999999999999999985332 3689999999999998644 433322 1
Q ss_pred CchhhhhHHhhhhcCcEEEEEec-cE-EEecCCHHHHHHHHHHhh
Q 010554 330 NDFGSEIIPAAIMEHDVQAYIFR-DY-WEDIGTIKSFYEANMALT 372 (507)
Q Consensus 330 ~d~~~dil~~li~~~~V~~~~~~-gy-w~dIgt~~~y~~An~~ll 372 (507)
....+++++.+++.+++.++... +| |.||||++||.+|+..+.
T Consensus 197 e~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 197 ELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred ceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 12247788888888888888775 75 999999999999998764
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=3.2e-31 Score=266.20 Aligned_cols=232 Identities=23% Similarity=0.346 Sum_probs=185.3
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEec-cCchHHHHHHHhcccCCCcccCCC
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQ-FNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~-~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+ +.+|+.
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~-----g~~~g~- 76 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGD-----GSEFGI- 76 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-----SGGGTC-
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhc-----ccccCc-
Confidence 7999999999999999999999999999999 99999999999999999999885 667777777742 233431
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-cCCHHHHHHHHHHcCCceEEEEEEcC
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAVG 252 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~~dl~~ll~~h~~~~a~~tl~~~~~~ 252 (507)
.+.++. |. .+.||++|++.+..++. .++++++.||+++ +.++.++++.|.+.+.++++++.++.
T Consensus 77 ~i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~ 141 (296)
T 1mc3_A 77 QLEYAE--QP-------SPDGLAQAFIIGETFLN------GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVM 141 (296)
T ss_dssp EEEEEE--CS-------SCCCSTHHHHHTHHHHT------TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECS
T ss_pred eEEEec--cC-------CCCCHHHHHHHHHHHhC------CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECC
Confidence 233332 22 13699999999988874 3678888899865 67899999999877777888888877
Q ss_pred CCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC--CC
Q 010554 253 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--SN 330 (507)
Q Consensus 253 ~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~--~~ 330 (507)
+ +..||++.+|++|+|..|.|||..+. ++++++|+|+|+++++.. ++...+. ..
T Consensus 142 d--p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~ge 197 (296)
T 1mc3_A 142 D--PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVEY-AKQVKPSERGE 197 (296)
T ss_dssp C--CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHHH-HHSCCCCSSSS
T ss_pred C--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHHH-HHhcCccccCC
Confidence 6 56799999998999999999986432 368999999999999854 4443332 11
Q ss_pred chhhhhHHhhhhcCcEEEEEec-cE-EEecCCHHHHHHHHHHhh
Q 010554 331 DFGSEIIPAAIMEHDVQAYIFR-DY-WEDIGTIKSFYEANMALT 372 (507)
Q Consensus 331 d~~~dil~~li~~~~V~~~~~~-gy-w~dIgt~~~y~~An~~ll 372 (507)
-..+++++.+++.+++.++... +| |.||||+++|.+|+..+.
T Consensus 198 ~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 198 LEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp CCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 2247788888888888888875 76 999999999999998775
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.97 E-value=3.2e-30 Score=260.36 Aligned_cols=240 Identities=17% Similarity=0.321 Sum_probs=154.6
Q ss_pred ceEEEEEcCCCCCcccCCcc-CCCccceee-cCcchhhHHHHHHHHhcCCCEEEEEeccCc-hHHHHHHHhcccCCCccc
Q 010554 94 NVAAIILGGGAGTKLFPLTL-RAATPAVPV-AGCYRLIDIPMSNCINSGINKIFVLTQFNS-ASLNRHIARTYFGNGTNF 170 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~-~~PK~LlPI-~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~-~~l~~~l~~~~~~~~~~~ 170 (507)
+|+|||||||.||||+|||. .+||+|+|| +|+ |||+|+++++.++ +++|+|+++++. +.+.+++.+. |
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~-------~ 74 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE-------I 74 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT-------C
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh-------h
Confidence 58999999999999999997 899999999 588 9999999999999 999999999875 4566666421 2
Q ss_pred CCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-cCC-HHHHHHH---HHHcCCceE
Q 010554 171 GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMD-YMDFIQS---HVDRDADIT 245 (507)
Q Consensus 171 ~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~~d-l~~ll~~---h~~~~a~~t 245 (507)
+...+.++. +. +.+||+++++.+..++. ..+.|+|++||+++ +.+ +.++++. |.+.++++|
T Consensus 75 ~~~~~~~i~--~~-------~~~gt~~al~~a~~~l~-----~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t 140 (308)
T 2qh5_A 75 KNKSVGFLL--ES-------LSKNTANAIALSALMSD-----KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVT 140 (308)
T ss_dssp SSCEEEEEE--ES-------SCCCHHHHHHHHHHTSC-----TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCccEEEe--CC-------CCCChHHHHHHHHHHhC-----CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEE
Confidence 211234443 21 13699999999887663 13459999999988 666 8999987 777788888
Q ss_pred EEEEEcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhh
Q 010554 246 ISCAAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWR 325 (507)
Q Consensus 246 l~~~~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~ 325 (507)
+.+.+..+ +..||++..|++++|..|.|||........ + ...++++++|+|+|++++|.+.+++.
T Consensus 141 ~~~~~~~~--~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-~------------~~g~~~~n~Giy~~~~~~ll~~l~~~ 205 (308)
T 2qh5_A 141 FGVSIDKP--NTEFGYIESPNGLDVKRFIEKPSLDKAIEF-Q------------KSGGFYFNSGMFVFQAGVFLDELKKH 205 (308)
T ss_dssp EEEECSSC--CTTSEEEECSSSSBCSEEEESCCHHHHHHH-H------------HHCCEEEEEEEEEEEHHHHHHHHHHH
T ss_pred EEEecCCC--CCCceEEEECCCCEEEEEEECCChHHHHHH-h------------hcCCeEEEeEEEEEEHHHHHHHHHHh
Confidence 88877654 457999988878999999999975321000 0 00136899999999999875555433
Q ss_pred CCC--------------C----Cchh---hhhHHh---------hhhc-CcEEEEEeccEEEecCCHHHHHHHHHHh
Q 010554 326 YPT--------------S----NDFG---SEIIPA---------AIME-HDVQAYIFRDYWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 326 ~~~--------------~----~d~~---~dil~~---------li~~-~~V~~~~~~gyw~dIgt~~~y~~An~~l 371 (507)
.+. . .++. .++++. ++++ .+|+++.++++|.||||+++|.+++...
T Consensus 206 ~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 206 APTILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp CHHHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred ChHHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 221 0 1111 344442 4544 7899999999999999999999998653
No 20
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.95 E-value=3.4e-28 Score=238.90 Aligned_cols=221 Identities=16% Similarity=0.232 Sum_probs=163.0
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
+|.|||||||.||||+|||..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+ +.+. ++
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~-~~~~-------~~-- 93 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDY-LKEK-------YG-- 93 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTH-HHHH-------HC--
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHH-HHHh-------CC--
Confidence 58999999999999999999999999999999 9999999999999999999999988777643 3322 22
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCCHHHHHHHHHHcCCceEEEEEEcCC
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAVGE 253 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ll~~h~~~~a~~tl~~~~~~~ 253 (507)
++++...+. ...||+++++.++.++ ++++|++||+++..++ ++.+.+.++.+|+ ...+
T Consensus 94 -~~iv~~~~~-------~~~g~~~al~~a~~~~--------~~~lv~~~D~~~~~~~---~~~~~~~~~~~t~---~~~~ 151 (254)
T 1jyk_A 94 -VRLVFNDKY-------ADYNNFYSLYLVKEEL--------ANSYVIDADNYLFKNM---FRNDLTRSTYFSV---YRED 151 (254)
T ss_dssp -CEEEECTTT-------TTSCTHHHHHTTGGGC--------TTEEEEETTEEESSCC---CCSCCCSEEEEEC---EESS
T ss_pred -cEEEECCCc-------cCCCcHHHHHHHHHHC--------CCEEEEeCCcccCHHH---HHHHHhCCceEEE---Eccc
Confidence 344432221 1259999999886544 3589999999886553 2233333333332 2333
Q ss_pred CCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHH---HHHHHhhCCC--
Q 010554 254 SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVL---FKLLRWRYPT-- 328 (507)
Q Consensus 254 ~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL---~~ll~~~~~~-- 328 (507)
+ ...|+++ +|++|+|+.|.|+|. ..++++|+|+|+++.+ .++++...+.
T Consensus 152 ~-~~~~~v~-~d~~g~v~~~~e~~~------------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~ 205 (254)
T 1jyk_A 152 C-TNEWFLV-YGDDYKVQDIIVDSK------------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVSGE 205 (254)
T ss_dssp C-SSCCEEE-ECTTCBEEEEECCCS------------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTTTC
T ss_pred C-CCCeEEE-ECCCCeEEEEEECCC------------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCC
Confidence 2 1258765 788899999999753 1478999999998743 3344432221
Q ss_pred -CCchhhhhHHhhhhcCcEEEEEec-cEEEecCCHHHHHHHHHHhhc
Q 010554 329 -SNDFGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 329 -~~d~~~dil~~li~~~~V~~~~~~-gyw~dIgt~~~y~~An~~ll~ 373 (507)
...+..++++.++...+++++.++ ++|.+|+|++||.+|++.+..
T Consensus 206 ~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 206 FVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp CTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred ccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 334567788888888999999998 799999999999999987753
No 21
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=2.4e-28 Score=249.42 Aligned_cols=233 Identities=18% Similarity=0.269 Sum_probs=169.9
Q ss_pred eEEEEEcCCCCCcccCCc-cCCCccceeecC-cchhhHHHHHHHHhc-CCCEEEEEeccCc-hHHHHHHHhcccCCCccc
Q 010554 95 VAAIILGGGAGTKLFPLT-LRAATPAVPVAG-CYRLIDIPMSNCINS-GINKIFVLTQFNS-ASLNRHIARTYFGNGTNF 170 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT-~~~PK~LlPI~g-~ypLId~~L~~l~~~-Gi~~I~Vv~~~~~-~~l~~~l~~~~~~~~~~~ 170 (507)
|.+||||||.||||+||| ..+||+|+|++| + |||+|+++++.++ |+++|+|++++.. +.+.+++.+ ...+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~-----~~~~ 75 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPE-----LPDE 75 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTT-----SCGG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhc-----cccc
Confidence 789999999999999999 789999999999 7 9999999999997 8999999999874 445555531 1111
Q ss_pred CCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccC--CH----HHHHHHHHHcCCce
Q 010554 171 GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRM--DY----MDFIQSHVDRDADI 244 (507)
Q Consensus 171 ~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~--dl----~~ll~~h~~~~a~~ 244 (507)
.+ ++. + ..+||++|+..+...+. ..+.++|++||+++.. +| ..+++.|++.++.+
T Consensus 76 ---~i-i~e---~-------~~~gta~ai~~a~~~~~-----~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~v 136 (336)
T 2x65_A 76 ---NI-IAE---P-------MKKNTAPACFIGTKLAD-----DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLF 136 (336)
T ss_dssp ---GE-EEE---S-------SCCCHHHHHHHHHTTSC-----TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEE
T ss_pred ---eE-EeC---C-------CCCCcHHHHHHHHHhhC-----CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeE
Confidence 12 221 1 13699999998865332 2467999999998854 44 44455577767777
Q ss_pred EEEEEEcCCCCCccceEEEECCC-----CcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHH
Q 010554 245 TISCAAVGESRASDYGLVKIDNM-----GRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLF 319 (507)
Q Consensus 245 tl~~~~~~~~~~~~~g~v~id~~-----grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~ 319 (507)
|+.+.+..+ ...||++..+++ ++|..|.|||......... ....+++++|+|+|+++.|.
T Consensus 137 t~~i~p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~~-------------~~g~y~~n~Giy~~~~~~ll 201 (336)
T 2x65_A 137 TFGIVPTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKFV-------------ESGRFLWNSGMFLWKAREFI 201 (336)
T ss_dssp EEEECCCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHHH-------------HHTCEEEEEEEEEEEHHHHH
T ss_pred EEEeecccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHHHH-------------hcCCeEEEeeeEEEEHHHHH
Confidence 887766554 357999988764 7999999999754211000 00136899999999999885
Q ss_pred HHHHhhCCC-----------CCchhhhhHHh---------hhh-cCcEEEEEeccEEEecCCHHHHHHH
Q 010554 320 KLLRWRYPT-----------SNDFGSEIIPA---------AIM-EHDVQAYIFRDYWEDIGTIKSFYEA 367 (507)
Q Consensus 320 ~ll~~~~~~-----------~~d~~~dil~~---------li~-~~~V~~~~~~gyw~dIgt~~~y~~A 367 (507)
+.++...|. ..+|..++++. +++ ..++++++++++|.||||+++|+++
T Consensus 202 ~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 202 EEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 555443221 01455666665 344 3789999999999999999999999
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.94 E-value=4.8e-27 Score=239.88 Aligned_cols=232 Identities=19% Similarity=0.273 Sum_probs=165.2
Q ss_pred eEEEEEcCCCCCcccCCc-cCCCccceeecC-cchhhHHHHHHHHhc-CCCEEEEEeccCch-HHHHHHHhcccCCCccc
Q 010554 95 VAAIILGGGAGTKLFPLT-LRAATPAVPVAG-CYRLIDIPMSNCINS-GINKIFVLTQFNSA-SLNRHIARTYFGNGTNF 170 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT-~~~PK~LlPI~g-~ypLId~~L~~l~~~-Gi~~I~Vv~~~~~~-~l~~~l~~~~~~~~~~~ 170 (507)
|.+||||||.||||+||| ..+||+|+|++| + |||+|+++++.++ |+++|+|++++... .+.+++ +.
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l-----~~---- 72 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAVARPYA-----DG---- 72 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGC-----SS----
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHh-----cc----
Confidence 899999999999999999 689999999999 7 9999999999998 89999999998643 232222 21
Q ss_pred CCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccC--CHHHHH----HHHHHcCCce
Q 010554 171 GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRM--DYMDFI----QSHVDRDADI 244 (507)
Q Consensus 171 ~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~--dl~~ll----~~h~~~~a~~ 244 (507)
..+ ++.. +.+||+.|+..+.. +... ...+.|+|++||+++.. ++..++ +.|++ ++.+
T Consensus 73 --~~~-i~e~----------~~~gta~ai~~a~~-l~~~--~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~v 135 (337)
T 2cu2_A 73 --IRL-LLEP----------LGRDTAGAVLLGVA-EALK--EGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVV 135 (337)
T ss_dssp --SEE-EEES----------SCCHHHHHHHHHHH-HHHH--HTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEE
T ss_pred --Cce-EecC----------CCCCcHHHHHHHHH-Hhcc--CCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeE
Confidence 112 3321 13699999998877 5321 12478999999998753 344444 44544 6777
Q ss_pred EEEEEEcCCCCCccceEEEECCC----CcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHH
Q 010554 245 TISCAAVGESRASDYGLVKIDNM----GRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFK 320 (507)
Q Consensus 245 tl~~~~~~~~~~~~~g~v~id~~----grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ 320 (507)
|+.+.+..+ ...||++..+++ ++|..|.|||.......+ ....+++++|+|+|++++|.+
T Consensus 136 t~~i~p~~~--~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~--------------~~~g~~~n~Giy~f~~~~ll~ 199 (337)
T 2cu2_A 136 ALGLRPTRP--ETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEY--------------IRKGYVWNGGVFAFAPATMAE 199 (337)
T ss_dssp EEEECCSSC--CSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHH--------------HHTTCEEEEEEEEECHHHHHH
T ss_pred EEeeccCCC--CCCceEEEECCcccccCeEEEEEeCCChHHHHHH--------------hhcCCEEEEEEEEEeHHHHHH
Confidence 877766544 357999998765 799999999974321100 001168999999999998855
Q ss_pred HHHhhCCCCC-ch--------hhhhHHh---------hhh-cCcEEEEEeccEEEecCCHHHHHHHHH
Q 010554 321 LLRWRYPTSN-DF--------GSEIIPA---------AIM-EHDVQAYIFRDYWEDIGTIKSFYEANM 369 (507)
Q Consensus 321 ll~~~~~~~~-d~--------~~dil~~---------li~-~~~V~~~~~~gyw~dIgt~~~y~~An~ 369 (507)
.++...|... .+ ..+.++. +++ ..++++++++++|.||||+++|+++..
T Consensus 200 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~ 267 (337)
T 2cu2_A 200 LFRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFS 267 (337)
T ss_dssp HHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHT
T ss_pred HHHHHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhh
Confidence 5554432210 00 1334543 344 368999999999999999999999863
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.94 E-value=1.4e-25 Score=219.97 Aligned_cols=239 Identities=13% Similarity=0.189 Sum_probs=171.0
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
++.|||||+|.|||| | ||+|+||+|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~--------~g-- 62 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA--------FG-- 62 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--------TT--
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH--------cC--
Confidence 478999999999999 4 7999999999 99999999999999999999995 4677777752 22
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
++++...+. +..||+++ ..+...+. ....+.|++++||. +...++.++++.|.+.++++++++.++
T Consensus 63 -~~v~~~~~~-------~~~Gt~~~-~~~~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v 130 (252)
T 3oam_A 63 -GVVCMTSPN-------HQSGTERL-AEVVAKMA---IPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEI 130 (252)
T ss_dssp -CEEEECCTT-------CCSHHHHH-HHHHHHTT---CCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEE
T ss_pred -CEEEEcCCC-------CCCcHHHH-HHHHHhcC---cCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeec
Confidence 233332221 23699984 44544442 01247899999998 446779999999998888999999998
Q ss_pred CCCCCccc-----eEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhC
Q 010554 252 GESRASDY-----GLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRY 326 (507)
Q Consensus 252 ~~~~~~~~-----g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~ 326 (507)
++ +..| |.+..|++|+++.|.++|-........-... ....+++.++|+|+|++++|..+....
T Consensus 131 ~~--~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~~~~~--------~~~~~~~~n~GiY~~~~~~l~~~~~~~- 199 (252)
T 3oam_A 131 ED--EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADK--------AIVQPLLRHIGIYAYRAGFINTYLDWQ- 199 (252)
T ss_dssp CC--HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHHSSSC--------CCCSCEEEEEEEEEEETTHHHHHHHSC-
T ss_pred CC--HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccccccc--------cccccceEEEEEEEcCHHHHHHHHcCC-
Confidence 76 4556 8999999999999999875332110000000 001247999999999999998876532
Q ss_pred CCCCchhh--hhHHhhhhcCcEEEEEec-cEEEecCCHHHHHHHHHHhhcc
Q 010554 327 PTSNDFGS--EIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMALTKE 374 (507)
Q Consensus 327 ~~~~d~~~--dil~~li~~~~V~~~~~~-gyw~dIgt~~~y~~An~~ll~~ 374 (507)
++.....+ +.+..+-...+|.++..+ .+|.|||||+||.+|+..+.++
T Consensus 200 ~~~~e~~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 200 PSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp CCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred CCcccccchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 22111111 223322345799998765 4689999999999999887653
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.91 E-value=3.3e-23 Score=203.43 Aligned_cols=237 Identities=14% Similarity=0.174 Sum_probs=160.2
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
++.|||||+|.||||. ||+|+||+|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 9 ~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~--------~g-- 69 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED--------FG-- 69 (256)
T ss_dssp CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--------TT--
T ss_pred CceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--------cC--
Confidence 5799999999999994 8999999999 99999999999999999999986 4667666642 22
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee-c-cCCHHHHHHHHHHc-CCceEEEEEE
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL-Y-RMDYMDFIQSHVDR-DADITISCAA 250 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i-~-~~dl~~ll~~h~~~-~a~~tl~~~~ 250 (507)
++++...+ +++.||++ ++.+...+.. ...+.|+++.||.. . ...+..+++.|++. ++++++++.+
T Consensus 70 -~~v~~~~~-------~~~~Gt~~-i~~a~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~ 137 (256)
T 3tqd_A 70 -AVVCMTSS-------DHQSGTER-IAEAAVALGF---EDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTP 137 (256)
T ss_dssp -CEEEECCT-------TCCSHHHH-HHHHHHHTTC---CTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEE
T ss_pred -CeEEEeCC-------CCCCcHHH-HHHHHHHhCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeE
Confidence 23332222 23468887 6677666520 12478999999993 3 56789999999874 5678888888
Q ss_pred cCCC----CCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhC
Q 010554 251 VGES----RASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRY 326 (507)
Q Consensus 251 ~~~~----~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~ 326 (507)
+.++ ++..++ +.+|++|+++.|.+||......... .........+++...|+|.|++++|..+... .
T Consensus 138 v~~~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~-------~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l-~ 208 (256)
T 3tqd_A 138 ITEVDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFS-------DKENLQLNGSHYRHVGIYAYRVGFLEEYLSW-D 208 (256)
T ss_dssp CCCHHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTT-------CGGGCCCSSCCEEEEEEEEEEHHHHHHHHHS-C
T ss_pred cCCHHHhhCCCccE-EEECCCCEEeEEecCCCCCCCcccc-------cccccccCCcceEEEEEEEcCHHHHHHHHhC-C
Confidence 7541 233344 4578899999999998632110000 0000000125789999999999999877543 2
Q ss_pred CCCCchhh--hhHHhhhhcCcEEEEEeccE-EEecCCHHHHHHHHHH
Q 010554 327 PTSNDFGS--EIIPAAIMEHDVQAYIFRDY-WEDIGTIKSFYEANMA 370 (507)
Q Consensus 327 ~~~~d~~~--dil~~li~~~~V~~~~~~gy-w~dIgt~~~y~~An~~ 370 (507)
++.....+ +.+..+-...+|+++..+++ |.+||||+||.+|+..
T Consensus 209 ~s~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 209 ACPAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp CCHHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred CCcccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 32111111 22333345679999999875 8999999999999753
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.91 E-value=3e-23 Score=204.60 Aligned_cols=237 Identities=15% Similarity=0.216 Sum_probs=165.1
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
++.|||||||.|||| | +|+|+||+|+ |||+|+++++.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 18 ~~~aIIlA~G~stRl-p-----~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~--------~g-- 78 (264)
T 3k8d_A 18 SFVVIIPARYASTRL-P-----GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA--------AG-- 78 (264)
T ss_dssp CCEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--------TT--
T ss_pred ceEEEEEcCCCCCCC-C-----CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--------cC--
Confidence 479999999999999 2 5999999999 99999999999999999999985 4667666642 22
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
++++...+ .++.||+. +..+...+. ....+.|+++.||. +...++.++++.|.+.++++++++.++
T Consensus 79 -~~v~~~~~-------~~~~Gt~~-i~~~~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v 146 (264)
T 3k8d_A 79 -GEVCMTRA-------DHQSGTER-LAEVVEKCA---FSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPI 146 (264)
T ss_dssp -CEEEECCT-------TCCSHHHH-HHHHHHHHT---CCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEEC
T ss_pred -CEEEEecC-------CCCCCHHH-HHHHHHHhc---cCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEc
Confidence 23332222 23468887 777766663 11347899999998 446778999999998889999999988
Q ss_pred CCC----CCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC
Q 010554 252 GES----RASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 327 (507)
Q Consensus 252 ~~~----~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~ 327 (507)
.++ ++..+. +.+|++|+++.|.+||..........+. .....+++.++|+|+|++++|..+... .+
T Consensus 147 ~d~~~~~~p~~vk-Vv~d~~g~~l~fsr~~ip~~r~~~~~~~--------~~~~~~~~~~~GiY~y~~~~l~~~~~~-~~ 216 (264)
T 3k8d_A 147 HNAEEAFNPNAVK-VVLDAEGYALYFSRATIPWDRDRFAEGL--------ETVGDNFLRHLGIYGYRAGFIRRYVNW-QP 216 (264)
T ss_dssp CSHHHHTCTTSCE-EEECTTSBEEEEESSCCSCCHHHHHHCS--------SCCCSCCEEECSEEEEEHHHHHHHHHS-CC
T ss_pred CCHHHccCCCceE-EEECCCCeEEEEecCCCCCCCccccccc--------cccCCcceEEEEEEEECHHHHHHHHhC-CC
Confidence 752 122223 4578999999999998532110000000 000124789999999999999887653 22
Q ss_pred CCCchhh--hhHHhhhhcCcEEEEEecc-EEEecCCHHHHHHHHHHh
Q 010554 328 TSNDFGS--EIIPAAIMEHDVQAYIFRD-YWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 328 ~~~d~~~--dil~~li~~~~V~~~~~~g-yw~dIgt~~~y~~An~~l 371 (507)
......+ +.+..+-...+|+++...+ +|.+|+||+||..|+..+
T Consensus 217 ~~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 217 SPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp CHHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred ChhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 2111111 2233333457999986654 589999999999998653
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.90 E-value=3e-22 Score=193.07 Aligned_cols=225 Identities=15% Similarity=0.184 Sum_probs=154.7
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+ +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~--------~--- 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVED--------L--- 60 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT--------T---
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh--------c---
Confidence 3789999999999997 8999999999 9999999999999 9999999976 566666631 1
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ecc-CCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYR-MDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~~-~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
+.++...+. +..|+++++. +...+ ..+.|++++||+ +++ .++.++++.|.+.++.+++.....
T Consensus 61 -~~~~~~~~~-------~~~g~~~~~~-~~~~~------~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 125 (234)
T 2y6p_A 61 -CEVFLTPSD-------LPSGSDRVLY-VVRDL------DVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDK 125 (234)
T ss_dssp -SEEEECCTT-------CCSHHHHHHH-HHTTC------CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECS
T ss_pred -eEEEECCcc-------cccchHHHHH-HHHhC------CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCH
Confidence 122221111 1258888763 33222 247899999999 776 779999999988775455544421
Q ss_pred CC-CCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCC
Q 010554 252 GE-SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSN 330 (507)
Q Consensus 252 ~~-~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~ 330 (507)
.+ ..+..+++ ..|++|+|..|.|||....... . ..+.+.++|+|+|+++.|..+.+.. +...
T Consensus 126 ~~~~~~~~~~~-~~~~~g~v~~~~e~~~~~~~~~--~-------------~~~~~~~~giy~~~~~~l~~~~~~~-~~~~ 188 (234)
T 2y6p_A 126 EAYERPEDVKV-VLDREGYALYFSRSPIPYFRKN--D-------------TFYPLKHVGIYGFRKETLMEFGAMP-PSKL 188 (234)
T ss_dssp GGGGCTTSCEE-EECTTSBEEEEESSCCSCCSSC--C-------------SSCCEEEEEEEEEEHHHHHHHHHSC-CCHH
T ss_pred HHhcCCCceEE-EEcCCCCEeeeecCCCCccccc--c-------------cceeeEEEEEEEcCHHHHHHHHhCC-CCcc
Confidence 11 12333443 4577899999999874311000 0 0125679999999999987765421 1111
Q ss_pred chhhh--hHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHh
Q 010554 331 DFGSE--IIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 331 d~~~d--il~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~l 371 (507)
..... .+..+..+.++++|..+++|.||+||+||..|++.+
T Consensus 189 ~~~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 189 EQIEGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 11111 123233468999999999999999999999998765
No 27
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.89 E-value=2e-22 Score=195.86 Aligned_cols=229 Identities=17% Similarity=0.250 Sum_probs=159.0
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCC-CEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGI-NKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi-~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+.++|+ ++|+|++++ +.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~--------~~- 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA--------FG- 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH--------TT-
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH--------cC-
Confidence 478999999999999 6 9999999999 999999999999996 999999986 566666642 12
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee--ccCCHHHHHHHHHHc-CCceEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL--YRMDYMDFIQSHVDR-DADITISCA 249 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i--~~~dl~~ll~~h~~~-~a~~tl~~~ 249 (507)
++++...+ .+..|+++++..+. .++ .+.+++++||+. ...++.++++.|++. ++++++++.
T Consensus 64 --~~~~~~~~-------~~~~g~~~~~~~~~-~~~------~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 127 (245)
T 1h7e_A 64 --GKAIMTRN-------DHESGTDRLVEVMH-KVE------ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCH 127 (245)
T ss_dssp --CEEEECCS-------CCSSHHHHHHHHHH-HSC------CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred --CeEEeCCC-------ccCCcHHHHHHHHH-hCC------CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEee
Confidence 34443222 12358877664433 222 478999999994 356789999999888 788888777
Q ss_pred EcCCCCCccceE--EEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC
Q 010554 250 AVGESRASDYGL--VKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 327 (507)
Q Consensus 250 ~~~~~~~~~~g~--v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~ 327 (507)
+.+.....+++. +..+++|++..|.+++....... ...+.+.++|+|+|+++.|..++ .. +
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r~~---------------~~~~~~~~~g~y~~~~~~l~~~~-~~-~ 190 (245)
T 1h7e_A 128 AISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNA---------------EKARYLKHVGIYAYRRDVLQNYS-QL-P 190 (245)
T ss_dssp EECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCTTG---------------GGCCEEEEEEEEEEEHHHHHHGG-GS-C
T ss_pred cCCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCccc---------------ccCceeEEEEEEEcCHHHHHHHH-hC-C
Confidence 762111011222 22367899999988653211000 00125779999999999887655 22 2
Q ss_pred CCCchhhhhHHhhh---hcCcEEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010554 328 TSNDFGSEIIPAAI---MEHDVQAYIFRDYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 328 ~~~d~~~dil~~li---~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~ 373 (507)
.......+.++.+. ...+++++..+++|.||+||+||..|+..+..
T Consensus 191 ~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~~ 239 (245)
T 1h7e_A 191 ESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQ 239 (245)
T ss_dssp CCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHHH
T ss_pred CCccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 11112345554432 35799999999999999999999999876643
No 28
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.88 E-value=6.8e-23 Score=197.84 Aligned_cols=215 Identities=17% Similarity=0.231 Sum_probs=135.9
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
|++|.|||||||.|+||+|+ ||+|+|++|+ |||+|+++++.++ +++|+|++ ++.+++.+++.+.| +
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~-------~ 81 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDK-------G 81 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTS-------C
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhc-------C
Confidence 66799999999999999986 9999999999 9999999999999 99999999 77778877764322 1
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
..+.++.... +..|++++++.+...++ +++++++||+.++.++ ++...+.. . +++....
T Consensus 82 -~~~~~v~~~~--------~~~g~~~~i~~a~~~~~-------~~~lv~~~D~p~~~~~---~~~l~~~~-~-~~~~~~~ 140 (232)
T 2xme_A 82 -FNYKIVRHDR--------PEKGNGYSLLVAKNHVE-------DRFILTMGDHVYSQQF---IEKAVRGE-G-VIADREP 140 (232)
T ss_dssp -CCEEEEECSC--------GGGCHHHHHHTTGGGCC-------SSEEEEETTEEECHHH---HHHHTTCC-E-EEEESSC
T ss_pred -CcEEEEECCC--------CCCCcHHHHHHHHHHCC-------CCEEEEcCCcccCHHH---HHHHHhCC-C-cEEEccc
Confidence 1255553221 22699999998865442 6799999999875442 33332221 1 2221111
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCc
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 331 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d 331 (507)
....+.+++.+..+ +|+|..+.+++.. .+.+++|+|+|++++|.. +++.......
T Consensus 141 ~~~~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~~-l~~~~~~g~~ 195 (232)
T 2xme_A 141 RFVDIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFEH-AEKLRDREEI 195 (232)
T ss_dssp SSSCTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHHH-HGGGTTSSCC
T ss_pred cccCCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHHH-HHHHHhcChh
Confidence 11123457777665 6899999887642 256799999999999864 4443222111
Q ss_pred hhhhhHHhhhhcCcEEEEEec-cEEEecCCHHHHHHHHHH
Q 010554 332 FGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMA 370 (507)
Q Consensus 332 ~~~dil~~li~~~~V~~~~~~-gyw~dIgt~~~y~~An~~ 370 (507)
. +..++++.++.++.++ ++|.|||||+||.+|+..
T Consensus 196 ~----l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 196 P----LSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp C----HHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred H----HHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 1 2334444467777776 689999999999988754
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.87 E-value=5.6e-21 Score=187.95 Aligned_cols=242 Identities=14% Similarity=0.185 Sum_probs=161.3
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.++|+++|+|++++ +.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~--------~~-- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS--------FG-- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH--------TT--
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh--------cC--
Confidence 3789999999999995 3999999999 999999999999999999999975 456666642 12
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
++++...+ .+..|++ .+..+...+.. ...+.+++++||+ +...++.++++.|.+.++++++++.++
T Consensus 63 -~~~~~~~~-------~~~~g~~-~~~~~~~~l~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~ 130 (262)
T 1vic_A 63 -AEVCMTSV-------NHNSGTE-RLAEVVEKLAI---PDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKI 130 (262)
T ss_dssp -CEEEECCC-------SSCCHHH-HHHHHHHHTTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEEC
T ss_pred -CEEEECCc-------cccCChH-HHHHHHHHhcc---CCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 33332111 1234776 45555555531 1246799999998 345678999999988888888888887
Q ss_pred CCCC---CccceEEEECCCCcEEEEEeCCCcccccccccc--ccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhC
Q 010554 252 GESR---ASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVD--TSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRY 326 (507)
Q Consensus 252 ~~~~---~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~ 326 (507)
.++. ...++.+..+++|+++.|.+++..........+ .. ....| ..+..++|+|+|++++|..+... .
T Consensus 131 ~~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~~~~~-~~~~p-----~~~~~~~giy~~~~~~l~~~~~~-~ 203 (262)
T 1vic_A 131 HDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQ-KVQLS-----DAYLRHIGIYAYRAGFIKQYVQW-A 203 (262)
T ss_dssp CCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTCSCGG-GCCCC-----TTCEEEEEEEEEEHHHHHHHHHS-C
T ss_pred CCHHHhcCCCceEEEECCCCCEeeeecCCCCcCCcccccccccc-ccccc-----cceEEEEEEEEeeHHHHHHHHhC-C
Confidence 6520 113444555778999999887632110000000 00 00001 12578999999999988765432 1
Q ss_pred CCCCchhhhhHH--hhh-hcCcEEEEEec-cEEEecCCHHHHHHHHHHhhcc
Q 010554 327 PTSNDFGSEIIP--AAI-MEHDVQAYIFR-DYWEDIGTIKSFYEANMALTKE 374 (507)
Q Consensus 327 ~~~~d~~~dil~--~li-~~~~V~~~~~~-gyw~dIgt~~~y~~An~~ll~~ 374 (507)
+...+.. ++++ .++ ...+++++..+ ++|.||+||+||..|+..+...
T Consensus 204 ~~~~~~~-e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 204 PTQLENL-EKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp CCHHHHH-HTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred CCchhhh-hhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 1111111 1221 233 45799999998 7999999999999999887643
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.86 E-value=1.7e-20 Score=183.82 Aligned_cols=238 Identities=13% Similarity=0.136 Sum_probs=160.0
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHH-HHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPM-SNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L-~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
+.|||||+|.||||. +|+|+||+|+ |||+|++ +.+.++++++|+|++++ +.+.+++. . ++
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~-~-------~g-- 62 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATDD--ERIAEICR-A-------EG-- 62 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHH-T-------TT--
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHH-H-------cC--
Confidence 469999999999996 4999999999 9999999 99999999999999964 56666653 1 22
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ec-cCCHHHHHHHHHHc-CCceEEEEEE
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDR-DADITISCAA 250 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~-~~dl~~ll~~h~~~-~a~~tl~~~~ 250 (507)
++++...+. +..|| +++..+...+.. ...+.|+++.||. +. ...+..+++.|++. ++.+..++.+
T Consensus 63 -~~v~~~~~~-------~~~Gt-~~i~~a~~~~~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~ 130 (253)
T 4fcu_A 63 -VDVVLTSAD-------HPSGT-DRLSEVARIKGW---DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEP 130 (253)
T ss_dssp -CCEEECCTT-------CCCHH-HHHHHHHHHHTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEE
T ss_pred -CeEEEeCCC-------CCChH-HHHHHHHHhcCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEE
Confidence 223221111 12477 477777766631 1247899999999 33 46789999999876 3444444444
Q ss_pred cCC----CCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhC
Q 010554 251 VGE----SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRY 326 (507)
Q Consensus 251 ~~~----~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~ 326 (507)
..+ .++..+. +..|++|+++.|.++|-.........+.. .....++.++|+|+|++++|..+... .
T Consensus 131 ~~~~~~~~~p~~~k-vv~d~~g~~l~fsr~~ip~~r~~~~~~~~--------~~~~~~~~~~GiY~f~~~~l~~~~~~-~ 200 (253)
T 4fcu_A 131 IHALDEFQRDSIVK-VVMSKQNEALYFSRATIPYDRDGAKRDEP--------TLHTQAFRHLGLYAYRVSLLQEYVTW-E 200 (253)
T ss_dssp CCCHHHHHCTTSCE-EEECTTSBEEEEESSCCSCCTTTSSSSSC--------CCCSCCEEEEEEEEEEHHHHHHHTTS-C
T ss_pred cCCHHHccCCCccE-EEECCCCeEEEecCCCCCCCCCccccccc--------ccccceeEEEEEEEeCHHHHHHHHhC-C
Confidence 322 1233444 56788999999999875322110000000 00124688999999999999887532 1
Q ss_pred CCCCchhhhhH---HhhhhcCcEEEEEeccE-EEecCCHHHHHHHHHHhhcc
Q 010554 327 PTSNDFGSEII---PAAIMEHDVQAYIFRDY-WEDIGTIKSFYEANMALTKE 374 (507)
Q Consensus 327 ~~~~d~~~dil---~~li~~~~V~~~~~~gy-w~dIgt~~~y~~An~~ll~~ 374 (507)
++. -...|.+ ..+-...+|+++..+++ |.+||||+||..|+..+.++
T Consensus 201 ~~~-le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 201 MGK-LEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp CCH-HHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred CCc-ccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 221 1112333 22234579999999999 99999999999999766543
No 31
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.85 E-value=1.8e-19 Score=190.08 Aligned_cols=252 Identities=11% Similarity=0.116 Sum_probs=166.3
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeec-CcchhhHHHHHHHHhc----C--CCEEEEEeccCchHHHHHHHhcccC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVA-GCYRLIDIPMSNCINS----G--INKIFVLTQFNSASLNRHIARTYFG 165 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~-g~ypLId~~L~~l~~~----G--i~~I~Vv~~~~~~~l~~~l~~~~~~ 165 (507)
.++.+||||||.||||. ...||+|+||. |+ |+|++.++.+... | +.-+++...+..+.+.+|+.+.
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~--- 150 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY--- 150 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG---
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc---
Confidence 67999999999999995 68999999999 99 9999999999887 5 5544555566688898888642
Q ss_pred CCcccCCCeEEEecCcc-------------CCC--CCCCCcccChHHHHHHHH--HHHHhhhcCCCCeEEEEcCceeccC
Q 010554 166 NGTNFGDGFVEVLAATQ-------------TPG--ESGKNWFQGTADAVRQFT--WVFEDAKNRNIENVAILCGDHLYRM 228 (507)
Q Consensus 166 ~~~~~~~~~V~vl~~~q-------------~~~--~~~~~~~~Gta~AL~~~~--~~l~~~~~~~~~~~lVl~gD~i~~~ 228 (507)
..|+. .|.++.... .+. ......+.|||++++.+. ..+++......++|+|.++|.+...
T Consensus 151 --~~fG~-~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~ 227 (469)
T 2icy_A 151 --TNSNV-DIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAI 227 (469)
T ss_dssp --TTSSS-CEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCC
T ss_pred --ccCCc-eEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcc
Confidence 12332 233221100 000 001124689999997642 1122211234689999999999875
Q ss_pred CHHHHHHHHHHcCCceEEEEEEcCCCCCccceEEEECCCCc--EEEEEeCCCccccccccccccccCCCccccccCCcee
Q 010554 229 DYMDFIQSHVDRDADITISCAAVGESRASDYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVA 306 (507)
Q Consensus 229 dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id~~gr--V~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (507)
....++.+|.++++++|+.+.+...+. ..||++... +|+ ++++.|+|...... . ++ .....+.
T Consensus 228 ~d~~ll~~~~~~~a~~t~~v~~k~~~~-~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e-~---k~---------~~~~~~~ 292 (469)
T 2icy_A 228 VDLTILKHLIQNKNEYCMEVTPKTLAD-VKGGTLISY-EGKVQLLEIAQVPDEHVNE-F---KS---------IEKFKIF 292 (469)
T ss_dssp CCHHHHHHHHHHTCSEEEEEEECCTTC-CSSCEEEEE-TTEEEEECGGGSCGGGHHH-H---HS---------SSSCCEE
T ss_pred cCHHHHHHHHHcCCCeeEEEEEeccCC-CceeEEEEE-CCEEEEEEEeccChhhhhh-h---cc---------cccccee
Confidence 444899999999999999998876521 468988753 355 55566666532110 0 00 0012467
Q ss_pred eeEEEEEeHHHHHHHHHhhC---CC--------------CCchhhhhHHhhhhcCcEEEEEec-cEEEecCCHHHHHHHH
Q 010554 307 SMGVYVFKKDVLFKLLRWRY---PT--------------SNDFGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEAN 368 (507)
Q Consensus 307 ~~Giyif~~~iL~~ll~~~~---~~--------------~~d~~~dil~~li~~~~V~~~~~~-gyw~dIgt~~~y~~An 368 (507)
++|+|+|++++|.++++... +. -+.|..++++.. .+..++.+. .+|..+.+..+|+.+.
T Consensus 293 N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~---~~~~~~~V~R~~F~PvKn~~dll~~~ 369 (469)
T 2icy_A 293 NTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF---DNAIGVNVPRSRFLPVKASSDLLLVQ 369 (469)
T ss_dssp EEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGS---TTCEEEECCGGGCCBCCSHHHHHHHH
T ss_pred eEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhc---CCeEEEEechhHcCcCCCHHHHHHHH
Confidence 99999999999998877521 10 012233333321 345666553 6799999999999999
Q ss_pred HHhh
Q 010554 369 MALT 372 (507)
Q Consensus 369 ~~ll 372 (507)
.++.
T Consensus 370 s~l~ 373 (469)
T 2icy_A 370 SDLY 373 (469)
T ss_dssp STTE
T ss_pred HHHH
Confidence 8754
No 32
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.84 E-value=3.7e-20 Score=180.53 Aligned_cols=230 Identities=13% Similarity=0.124 Sum_probs=154.3
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
..+.|||||||.|+||.+ ..+||+|+|++|+ |||+|+++++.+++ +++|+|++++......+++.+.|...
T Consensus 2 ~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~----- 73 (246)
T 3f1c_A 2 SLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISD----- 73 (246)
T ss_dssp CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCC-----
T ss_pred CccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCC-----
Confidence 457899999999999987 5789999999999 99999999999997 99999999987654333333344211
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhc-CCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKN-RNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISC 248 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~-~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~ 248 (507)
..+.++.. + .+..++++.++..+.+... ...+.++++.||. +....+.++++.|.+.++. +.+
T Consensus 74 -~~~~~~~~-~----------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~--i~~ 139 (246)
T 3f1c_A 74 -DRIVVIEG-G----------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAV--DTV 139 (246)
T ss_dssp -TTEEEEEC-C----------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEE--EEE
T ss_pred -CCEEEECC-C----------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCE--EEE
Confidence 12444431 1 2678899999888863100 1247899999998 4466789999999887754 444
Q ss_pred EEcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC
Q 010554 249 AAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT 328 (507)
Q Consensus 249 ~~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~ 328 (507)
.++.+ .++..++++.|..+.+++.. +..-.-++|+.+.|.+.++.....
T Consensus 140 ~~~~d------~i~~~~~~~~v~~~~~r~~l-------------------------~~~qtpq~f~~~~L~~a~~~~~~~ 188 (246)
T 3f1c_A 140 IEALD------TIVESSNHEVITDIPVRDHM-------------------------YQGQTPQSFNMKKVFNHYQNLTPE 188 (246)
T ss_dssp EECSS------CEEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTSCHH
T ss_pred Eeccc------eEEEecCCCeEEEecChHHh-------------------------hhhcCCceeEHHHHHHHHHHHHHc
Confidence 55543 34444555666655554431 122245799999888877653111
Q ss_pred CCchhhhhHHhhhh-cCcEEEEEeccEEEecCCHHHHHHHHHHhhccC
Q 010554 329 SNDFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMALTKES 375 (507)
Q Consensus 329 ~~d~~~dil~~li~-~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~~ 375 (507)
...+.+|.+..+.. ..+|..+..+.+|.+|+||+||..|+..+..+.
T Consensus 189 ~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 189 KKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp HHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred CCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 11234455544433 468999999999999999999999998876553
No 33
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.83 E-value=4.7e-20 Score=177.61 Aligned_cols=223 Identities=12% Similarity=0.054 Sum_probs=139.4
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhc-CCCEEEEEeccCc-hHHHHHHHhcccCCCcccCC
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINS-GINKIFVLTQFNS-ASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~-Gi~~I~Vv~~~~~-~~l~~~l~~~~~~~~~~~~~ 172 (507)
|.|||||||.|+||++ ..+||+|+|++|+ |||+|+++++.++ ++++|+|+++++. +.+.+++. .+ + ..+.
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~-~~-~--~~~~- 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVD-KY-L--PLYK- 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHH-HH-C--GGGG-
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHH-hc-c--cccc-
Confidence 7899999999999998 6799999999999 9999999999998 5999999999887 44555443 22 1 0110
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcC--CCCeEEEEcCce-e-ccCCHHHHHHHHHHcCCceEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNR--NIENVAILCGDH-L-YRMDYMDFIQSHVDRDADITISC 248 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~--~~~~~lVl~gD~-i-~~~dl~~ll~~h~~~~a~~tl~~ 248 (507)
..+.... . ..|+.++++.++..+.+. .. ..+.+++++||+ + ...++.++++.|++.++ ++++
T Consensus 75 ~~~~~~~--~---------~~~~~~~i~~~l~~~~~~-~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~ 140 (236)
T 2vsh_A 75 ERIIITK--G---------GADRNTSIKNIIEAIDAY-RPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTV 140 (236)
T ss_dssp GGEEEEE--C---------CSSHHHHHHHHHHHHHHH-SCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEE
T ss_pred CceEEEC--C---------CCchHHHHHHHHHHHHhh-ccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEE
Confidence 0122221 1 037889999888777421 01 136788999999 4 45678999999988765 3445
Q ss_pred EEcCCCCCccceEEEECCCC-cEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCC
Q 010554 249 AAVGESRASDYGLVKIDNMG-RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 327 (507)
Q Consensus 249 ~~~~~~~~~~~g~v~id~~g-rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~ 327 (507)
.++.+ + +..+++| ++..+.+++.. ......|+|+++.|..+++....
T Consensus 141 ~~~~~--~-----~~~~~~g~~~~~~~~~~~~-------------------------~~~~~p~~f~~~~l~~~~~~~~~ 188 (236)
T 2vsh_A 141 VEAVD--T-----IVESTNGQFITDIPNRAHL-------------------------YQGQTPQTFRCKDFMDLYGSLSD 188 (236)
T ss_dssp EECCS--C-----EEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTCCH
T ss_pred Eeccc--c-----EEEeCCCCeeeeecChHHh-------------------------eeecCCcEecHHHHHHHHHHHHh
Confidence 55543 2 2224567 77766654321 11123789999988776653211
Q ss_pred CCCchhhhhHHhhhh-cCcEEEEEeccEEEecCCHHHHHHHHHHh
Q 010554 328 TSNDFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 328 ~~~d~~~dil~~li~-~~~V~~~~~~gyw~dIgt~~~y~~An~~l 371 (507)
.......+.+..+.. ..++.++..+++|.||+||+||..|+..+
T Consensus 189 ~g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~ 233 (236)
T 2vsh_A 189 EEKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMI 233 (236)
T ss_dssp HHHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHT
T ss_pred cCCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHh
Confidence 100001222333332 36899998888999999999999998765
No 34
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.81 E-value=1.6e-18 Score=166.61 Aligned_cols=220 Identities=10% Similarity=0.055 Sum_probs=135.2
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
.+|.|||||||.|+||++ ..||+|+|++|+ |||+|+++.+..++ +++|+|++++..+.+.+ +.+ + +
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~-~------ 71 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQT-A-F------ 71 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHH-H-C------
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHh-c-C------
Confidence 358999999999999996 689999999999 99999999999985 99999999987766655 532 1 1
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhc-CCCCeEEEEcCcee-c-cCCHHHHHHHHHHcCCceEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKN-RNIENVAILCGDHL-Y-RMDYMDFIQSHVDRDADITISC 248 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~-~~~~~~lVl~gD~i-~-~~dl~~ll~~h~~~~a~~tl~~ 248 (507)
...++++. . ..|++++++.+...+.+... ...+.++++.||.. . ...+.++++.|.+.+.. .+++
T Consensus 72 ~~~i~~~~--~---------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~-~~~~ 139 (231)
T 1vgw_A 72 PQVRVWKN--G---------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEG-GILA 139 (231)
T ss_dssp TTSEEECC--C---------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTC-EEEE
T ss_pred CCceEEEc--C---------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCe-EEEE
Confidence 01244431 1 14899999998877741000 02478999999983 3 45588999988765522 3444
Q ss_pred EEcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC
Q 010554 249 AAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT 328 (507)
Q Consensus 249 ~~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~ 328 (507)
.+..+. +... ++|++....++ .. .+.....|+|+.+.|..+++.....
T Consensus 140 ~~~~~~------~~~~-~~g~i~~~~~~---~~----------------------~~~~~~p~~f~~~~l~~~~~~~~~~ 187 (231)
T 1vgw_A 140 VPVADT------LKRA-ESGQISATVDR---SG----------------------LWQAQTPQLFQAGLLHRALAAENLG 187 (231)
T ss_dssp EECCSC------EEEE-SSSBEEEEECC---TT----------------------EEEEEEEEEEEHHHHHHHHHC----
T ss_pred eecccc------eEEe-CCCceEecCCh---HH----------------------heeeeCCcEecHHHHHHHHHHHhhc
Confidence 554331 1112 45665543221 10 1222348999999887776542211
Q ss_pred CCchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHh
Q 010554 329 SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 329 ~~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~l 371 (507)
.......++... ..++..+..+++|.||+||+||..|+..+
T Consensus 188 g~~~~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 188 GITDEASAVEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp CCCSHHHHHHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred CCCcHHHHHHHc--CCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 111112233221 36788888778999999999999998654
No 35
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.81 E-value=5e-19 Score=169.08 Aligned_cols=214 Identities=15% Similarity=0.076 Sum_probs=147.9
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchH-HHHHHHhcccCCCcccC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSAS-LNRHIARTYFGNGTNFG 171 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~-l~~~l~~~~~~~~~~~~ 171 (507)
+|.|||||||.||||+ ..+||+|+|++|+ |||+|+++.+.+++ +++|+|++++.... +.+++ . + .
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~-----~-~--~- 68 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVF-----G-G--E- 68 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHT-----C-B--T-
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHh-----c-c--C-
Confidence 3789999999999998 4689999999999 99999999999988 99999999987643 32222 1 0 1
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ec-cCCHHHHHHHHHHcCCceEEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDRDADITISCA 249 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~-~~dl~~ll~~h~~~~a~~tl~~~ 249 (507)
.+.++. +. .+++++++.++..++ ..+.++++.||+ +. ..++.++++.|. .+.++++.+.
T Consensus 69 --~v~~~~--~~---------~~~~~~i~~al~~~~-----~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~ 129 (223)
T 2xwl_A 69 --DSVIVS--GG---------VDRTESVALALEAAG-----DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGL 129 (223)
T ss_dssp --TEEEEE--CC---------SSHHHHHHHHHTTCT-----TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEE
T ss_pred --CeEEEc--CC---------CCHHHHHHHHHHhcC-----CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEE
Confidence 144442 11 267888888875552 246789999998 33 457899999883 3446677666
Q ss_pred EcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCC
Q 010554 250 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 329 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~ 329 (507)
+..+ +..+ .|++|++..+.|++.. ......|+|++..+..+++...
T Consensus 130 ~~~d--~~~~----~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~--- 175 (223)
T 2xwl_A 130 APAD--TIKA----VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT--- 175 (223)
T ss_dssp CCSS--CEEE----ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC---
T ss_pred eccc--ceEE----EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh---
Confidence 6554 2222 3777899888776421 1112357899988776654321
Q ss_pred CchhhhhHHhhhh-cCcEEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010554 330 NDFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 330 ~d~~~dil~~li~-~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~ 373 (507)
.++..+....+.. ..++..+..+++|.||+||+||..|+..+..
T Consensus 176 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 176 AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp SCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 1222333332222 4678888888899999999999999876643
No 36
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.81 E-value=4.7e-19 Score=170.27 Aligned_cols=216 Identities=16% Similarity=0.117 Sum_probs=146.6
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
++.|||||||.|+||. ||+|+|++|+ |||+|+++.+.+++ +++|+|++++ +.+.+++. . ++
T Consensus 4 ~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~-~-------~~- 65 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAK-N-------FG- 65 (228)
T ss_dssp EEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHH-H-------TT-
T ss_pred ceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHH-H-------cC-
Confidence 4679999999999997 8999999999 99999999999998 7999999964 44555553 2 12
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee--ccCCHHHHHHHHHHcCCceEEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL--YRMDYMDFIQSHVDRDADITISCAA 250 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i--~~~dl~~ll~~h~~~~a~~tl~~~~ 250 (507)
++++....... .+..|++++++.++..+. ...+.++++.||+. ...++.++++.|++.++++++.+.+
T Consensus 66 --~~~~~~~~~~~----~~~~g~~~sv~~~l~~~~----~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 135 (228)
T 1ezi_A 66 --VEVVLRPAELA----SDTASSISGVIHALETIG----SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACP 135 (228)
T ss_dssp --CEEEECCC----------CHHHHHHHHHHHHHT----CCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEE
T ss_pred --CEEEeCchHHc----CCCCChHHHHHHHHHHhC----CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 22221111000 012588999999987773 12467999999983 3467899999888777788888877
Q ss_pred cCCCCCccceEEEECCCCcEEEEEeCCC-ccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCC
Q 010554 251 VGESRASDYGLVKIDNMGRIAQFAEKPS-GANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 329 (507)
Q Consensus 251 ~~~~~~~~~g~v~id~~grV~~~~eKp~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~ 329 (507)
..+. + ++...+|++|++..+.+... .... +. ....+..+.|+|+++++.|...++
T Consensus 136 ~~~~-p--~~~~~~~~~g~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~giy~~~~~~l~~~~~------ 191 (228)
T 1ezi_A 136 MEHH-P--LKTLLQINNGEYAPMRHLSDLEQPR--------------QQ-LPQAFRPNGAIYINDTASLIANNC------ 191 (228)
T ss_dssp CSSC-T--TSCEEECC--CEEESSCHHHHTCCG--------------GG-SCCEEEEEEEEEEEEHHHHHHHTS------
T ss_pred cCCC-c--ceeeEEcCCCcEeeccccccccCCc--------------cc-CchhheeeeEEEEEeHHHHhhCCc------
Confidence 7652 2 22233477888888865210 0000 00 001245678999999988754210
Q ss_pred CchhhhhHHhhhhcCcEEEEEec-cEEEecCCHHHHHHHHHHhh
Q 010554 330 NDFGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMALT 372 (507)
Q Consensus 330 ~d~~~dil~~li~~~~V~~~~~~-gyw~dIgt~~~y~~An~~ll 372 (507)
....++.++..+ .+|.||+||+||..|+..+.
T Consensus 192 -----------~~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 192 -----------FFIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp -----------SCCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred -----------ccCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 014577778776 58999999999999987654
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.80 E-value=3.3e-19 Score=171.15 Aligned_cols=220 Identities=13% Similarity=0.092 Sum_probs=139.5
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhc-CCCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINS-GINKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~-Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
.++.|||||||.|+||. ..+||+|+|++|+ |||+|+++.+.++ ++++|+|++++..+.+.+++.. .++
T Consensus 3 ~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~-------~~~ 71 (228)
T 2yc3_A 3 KSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEE-------SID 71 (228)
T ss_dssp TCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTT-------TSS
T ss_pred cceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHH-------hCC
Confidence 46899999999999997 4689999999999 9999999999998 8999999999887666554432 121
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCA 249 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~ 249 (507)
..+.++.. . .|..++++.++..+++ ..+.++++.||. +...++..+++.|++.++ ++++.
T Consensus 72 -~~v~~~~~-~----------~~~~~sv~~al~~~~~----~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~~ 133 (228)
T 2yc3_A 72 -VDLSFAIP-G----------KERQDSVYSGLQEIDV----NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLGV 133 (228)
T ss_dssp -SEEEEECC-C----------SSHHHHHHHHHTTSCT----TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEEE
T ss_pred -CcEEEECC-C----------CCHHHHHHHHHHhhcc----CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEEE
Confidence 12444421 1 3888999988766531 236788999997 345668999999987654 45555
Q ss_pred EcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCC
Q 010554 250 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 329 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~ 329 (507)
+..+. +..+++++.+..+.+++. .....+ .|+|+.+.|.+.++......
T Consensus 134 ~~~~~------~~~~~~~~~v~~~~~~~~------------------------~~~~~~-~~~f~~~~l~~~~~~~~~~~ 182 (228)
T 2yc3_A 134 PAKAT------IKEVNSDSLVVKTLDRKT------------------------LWEMQT-PQVIKPELLKKGFELVKSEG 182 (228)
T ss_dssp ECCSC------CCCBCTTSCBCCCCSCCC------------------------CEEEEE-EEEECHHHHHHHHHHHHHHT
T ss_pred eccce------EEEEcCCCceEEecCccc------------------------eEEEeC-CcEEEHHHHHHHHHHHHhcC
Confidence 54331 112344445443221110 123333 89999887766654311111
Q ss_pred CchhhhhHHhhhh-cCcEEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010554 330 NDFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 330 ~d~~~dil~~li~-~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~ 373 (507)
. +..+.+..+.+ ..++..+..+..|.||+||+||..|+..+..
T Consensus 183 ~-~~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 226 (228)
T 2yc3_A 183 L-EVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE 226 (228)
T ss_dssp C-CCCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred C-CcccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHhh
Confidence 1 12333333333 3567655555679999999999999876543
No 38
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.79 E-value=5.9e-20 Score=177.51 Aligned_cols=200 Identities=14% Similarity=0.118 Sum_probs=140.9
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
+|.+||||||. |||.+.+...||+|+|++|+ |||+|+++.+..+++ +|+|+++. +.+ +.++ +
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~~--~~i-----~~~~------~-- 63 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGEN--PGL-----VPAP------A-- 63 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESCC--SSC-----SSCC------S--
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeCh--HHH-----hhhc------C--
Confidence 37899999999 88887776789999999999 999999999999998 88887553 322 1111 1
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
+++ .. ..|++++++.+...++ +.|+|++||+ +...++.++++ | ..++++++.+.+.
T Consensus 64 -~~~---~~---------~~g~~~~i~~a~~~~~-------~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~ 121 (232)
T 2dpw_A 64 -LTL---PD---------RGGLLENLEQALEHVE-------GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPK 121 (232)
T ss_dssp -EEE---CC---------CSSHHHHHHHHHHTCC-------SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEH
T ss_pred -eEe---cC---------CCCHHHHHHHHHHHcC-------CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeec
Confidence 444 11 2599999999875542 7899999999 55667889998 7 6667788877764
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhh-----C
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWR-----Y 326 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~-----~ 326 (507)
++.. ..|+.+ .++|..+.||| .+++|+|+|++++|..+.+.. .
T Consensus 122 ~~~~-~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~~ 169 (232)
T 2dpw_A 122 EAVE-ARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVAL 169 (232)
T ss_dssp HHHH-HHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHHT
T ss_pred cchh-hhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHHh
Confidence 3210 223322 24577776553 368999999999876554321 1
Q ss_pred CC-------------------CCchhhhhHHhhhh--cCcEEEEEec--cEEEecCCHHHHH
Q 010554 327 PT-------------------SNDFGSEIIPAAIM--EHDVQAYIFR--DYWEDIGTIKSFY 365 (507)
Q Consensus 327 ~~-------------------~~d~~~dil~~li~--~~~V~~~~~~--gyw~dIgt~~~y~ 365 (507)
+. .....+++++.++. ..++.++.++ +.|.|||||+||.
T Consensus 170 ~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 170 RKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp TTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred ccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 10 12234566655553 3788888884 6799999999984
No 39
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.78 E-value=3e-17 Score=174.08 Aligned_cols=204 Identities=13% Similarity=0.156 Sum_probs=136.7
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeec-CcchhhHHHHHHHHhc----CCC-EEEEEec-cCchHHHHHHHhccc
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVA-GCYRLIDIPMSNCINS----GIN-KIFVLTQ-FNSASLNRHIARTYF 164 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~-g~ypLId~~L~~l~~~----Gi~-~I~Vv~~-~~~~~l~~~l~~~~~ 164 (507)
..++.+||||||.||||+ ...||+|+||+ |+ |||+|+++.+... |.. .++|+++ +..+.+.+++.+ +
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~-~- 163 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKK-Y- 163 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGG-G-
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHh-c-
Confidence 568899999999999998 57999999999 99 9999999999877 543 3666666 888889888864 2
Q ss_pred CCCcccCCCeEEEecCccC---------------CC--CCCCCcccChHHHHHHH--HHHHHhhhcCCCCeEEEEcCcee
Q 010554 165 GNGTNFGDGFVEVLAATQT---------------PG--ESGKNWFQGTADAVRQF--TWVFEDAKNRNIENVAILCGDHL 225 (507)
Q Consensus 165 ~~~~~~~~~~V~vl~~~q~---------------~~--~~~~~~~~Gta~AL~~~--~~~l~~~~~~~~~~~lVl~gD~i 225 (507)
..|+. .+.++ .|. .. ......+.|||++++.. ...++.......++++|++||++
T Consensus 164 ---~~fg~-~i~~f--~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL 237 (488)
T 2i5k_A 164 ---SANRI-RIRSF--NQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNL 237 (488)
T ss_dssp ---CSSSC-EEEEE--CCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBS
T ss_pred ---cccCc-eEEEE--EeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcC
Confidence 12221 12222 121 00 00112467999999843 11122211234689999999998
Q ss_pred cc-CCHHHHHHHHHHcCCceEEEEEEcCCCCCc-cceEEEECCCCc--EEEEEeCCCccccccccccccccCCCcccccc
Q 010554 226 YR-MDYMDFIQSHVDRDADITISCAAVGESRAS-DYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEARK 301 (507)
Q Consensus 226 ~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~-~~g~v~id~~gr--V~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~ 301 (507)
.. .|+. ++.+|..+++++++.+.+.++ +. .||++..+ +|+ |+++.|.|...... .+ +. .
T Consensus 238 ~~~~d~~-~L~~~~~~~a~~t~~v~~~~~--p~~~yG~Iv~~-dG~~~iVE~~e~~~e~~~~---~~-~~---------~ 300 (488)
T 2i5k_A 238 GATVDLK-ILNHMIETGAEYIMELTDKTR--ADVKGGTLISY-DGQVRLLEVAQVPKEHIDE---FK-NI---------R 300 (488)
T ss_dssp SCCCCHH-HHHHHHHSCCSEEEEEEECCG--GGSSSCEEEEE-TTEEEEECGGGSCTTSHHH---HT-CT---------T
T ss_pred CCcccHH-HHHHHHhcCCcEEEEEEEecC--CCCceeEEEEE-CCcEEEEEeccCCHHHHhh---cc-cc---------c
Confidence 86 5775 669999999999999887755 43 49988764 566 33333334321100 00 00 0
Q ss_pred CCceeeeEEEEEeHHHHHHHHHh
Q 010554 302 CPYVASMGVYVFKKDVLFKLLRW 324 (507)
Q Consensus 302 ~~~l~~~Giyif~~~iL~~ll~~ 324 (507)
....+|+|+|+|+.+.|.++++.
T Consensus 301 ~~~~~Ntgi~~f~~~~L~~~l~~ 323 (488)
T 2i5k_A 301 KFTNFNTNNLWINLKAVKRLIES 323 (488)
T ss_dssp TCCEEEEEEEEEEHHHHHHHHHT
T ss_pred ccCEEEEEEEEEeHHHHHHHHhh
Confidence 12467999999999999998875
No 40
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.73 E-value=2.9e-17 Score=158.21 Aligned_cols=215 Identities=15% Similarity=0.182 Sum_probs=135.0
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
++.|||||+|.||||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++. .+.+.+++.+ ++
T Consensus 3 ~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~--------~g- 64 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ--------FG- 64 (229)
T ss_dssp CEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH--------TT-
T ss_pred cEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH--------cC-
Confidence 4789999999999995 4999999999 99999999999998 699999984 4566666542 22
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee--ccCCHHHHHHHHHHcCCceEEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL--YRMDYMDFIQSHVDRDADITISCAA 250 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i--~~~dl~~ll~~h~~~~a~~tl~~~~ 250 (507)
++++...+.... . ..+..++++.+...+. ..+.|++++||.- ...++.++++.|++.+++.++.+.+
T Consensus 65 --~~~~~~~~~~~~---~-~~~~~~~v~~al~~~~-----~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~ 133 (229)
T 1qwj_A 65 --AQVHRRSSETSK---D-SSTSLDAIVEFLNYHN-----EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVR 133 (229)
T ss_dssp --CEEEECCGGGSS---T-TCCHHHHHHHHHTTCT-----TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEE
T ss_pred --CEEEeChhhhcC---C-CCcHHHHHHHHHHhcC-----CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEee
Confidence 233321110000 0 1244578887765552 2478999999983 3467899999998888876666554
Q ss_pred cCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCC
Q 010554 251 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSN 330 (507)
Q Consensus 251 ~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~ 330 (507)
..+ +..+++ .| + +..|.+++...... ..+.......+..++|+|+|+++.| ++
T Consensus 134 ~~~--p~~~~v--~~--~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~n~giY~~~~~~l---~~------- 186 (229)
T 1qwj_A 134 RHQ--FRWSEI--QK--G-VREVTEPLNLNPAK----------RPRRQDWDGELYENGSFYFAKRHLI---EM------- 186 (229)
T ss_dssp ECC--CEECCC--CS--S-TTCCCCBSSSBTTB----------CCCTTTSCCEEEEEEEEEEEEHHHH---HT-------
T ss_pred ccC--hhHhhc--cc--c-cccccccccccccc----------ccCCCCCCceEEEeeEEEEEEHHHh---cc-------
Confidence 433 333322 22 2 11122111000000 0000000012568999999999887 11
Q ss_pred chhhhhHHhhhhcCcEEEE-Eec-cEEEecCCHHHHHHHHHHhhc
Q 010554 331 DFGSEIIPAAIMEHDVQAY-IFR-DYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 331 d~~~dil~~li~~~~V~~~-~~~-gyw~dIgt~~~y~~An~~ll~ 373 (507)
.+.....+ .+ ..+ ++|.||||++||..|+..+..
T Consensus 187 --------~~~~g~~~-~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 187 --------GYLQGGKM-AYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp --------TCSSCSSE-EEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred --------ccccCCeE-EEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 11223344 34 555 689999999999999987654
No 41
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.72 E-value=1.1e-16 Score=154.54 Aligned_cols=219 Identities=11% Similarity=0.108 Sum_probs=140.4
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
.+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+..++ +++|+|+++++.+.+.+ +. . ++
T Consensus 6 ~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~-~-------~~ 72 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LP-L-------AN 72 (236)
T ss_dssp CCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SG-G-------GG
T ss_pred CceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HH-h-------cC
Confidence 35899999999999997 4589999999999 99999999999887 89999999987655433 21 1 11
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-c-CCHHHHHHHHHHcCCceEEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-R-MDYMDFIQSHVDRDADITISCA 249 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~-~dl~~ll~~h~~~~a~~tl~~~ 249 (507)
...+.++.. . .|..++++.++..+. ..+.++++.||+.+ . ..+..+++.|.+.++.. +.+.
T Consensus 73 ~~~v~~~~~--~---------~g~~~~i~~al~~~~-----~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~ 135 (236)
T 1i52_A 73 HPQITVVDG--G---------DERADSVLAGLKAAG-----DAQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAA 135 (236)
T ss_dssp CTTEEEEEC--C---------SSHHHHHHHHHHTST-----TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEE
T ss_pred CCCEEEECC--C---------CCHHHHHHHHHHhcC-----CCCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEE
Confidence 112444421 1 378889988876552 24789999999843 3 45788888876655332 4344
Q ss_pred EcCCCCCccceEEEECCC-CcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC
Q 010554 250 AVGESRASDYGLVKIDNM-GRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT 328 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~-grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~ 328 (507)
+..+. +...+++ |++....+.. .-+..-+.++|+.+.|..+++.....
T Consensus 136 ~~~~~------~~~~~~~~~~i~~~~~~~-------------------------~i~~~~~p~~f~~~~l~~~~~~~~~~ 184 (236)
T 1i52_A 136 PVRDT------MKRAEPGKNAIAHTVDRN-------------------------GLWHALTPQFFPRELLHDCLTRALNE 184 (236)
T ss_dssp ECCSC------EEEECTTSSSEEEEECCT-------------------------TCEEEEEEEEEEHHHHHHHHHHHHHT
T ss_pred ecccc------EEEEcCCCCceeeccChH-------------------------hheeeeCCceecHHHHHHHHHHHHhc
Confidence 44321 1123444 4554332110 01122256788887776666542111
Q ss_pred CCchh--hhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhcc
Q 010554 329 SNDFG--SEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKE 374 (507)
Q Consensus 329 ~~d~~--~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~~ 374 (507)
...+. ..++.. ...++..+..++.|.||+||+||..|+..+.++
T Consensus 185 g~~~td~~~~~~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 185 GATITDEASALEY--CGFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp TCCCCSHHHHHHH--TTCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred CCCcccHHHHHHH--cCCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 11111 122222 136788888778899999999999999876543
No 42
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.72 E-value=6.9e-17 Score=151.12 Aligned_cols=186 Identities=13% Similarity=0.165 Sum_probs=128.7
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
++.|||||||.|+||. .||+|+|++|+ |||+|+++.+.++++++|+|+++++.+.+.+++. .++
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~--------~~~-- 68 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVE--------LDG-- 68 (199)
T ss_dssp CEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSC--------CTT--
T ss_pred ceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhc--------cCC--
Confidence 5899999999999996 69999999999 9999999999999999999999988776655542 112
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec--cCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~--~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
+.++.... +..|++++++.+...++ ...+.++++.||+.+ ..++.++++. +.++++++...
T Consensus 69 -~~~~~~~~--------~~~g~~~~i~~al~~~~----~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~-- 131 (199)
T 2waw_A 69 -LDIVLVDD--------AGLGCSSSLKSALTWVD----PTAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY-- 131 (199)
T ss_dssp -SEEEECCC--------CCTTCCCHHHHHHHTSC----TTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE--
T ss_pred -CEEEECCC--------cccCHHHHHHHHHHhhh----ccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec--
Confidence 34443211 22589999999876662 124789999999954 5667888877 44555443221
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCc
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 331 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d 331 (507)
+ |+ +. .-++|+++.|..+.+. .....
T Consensus 132 -------------~--g~-------~~------------------------------~P~~~~~~~l~~~~~~--~~~~~ 157 (199)
T 2waw_A 132 -------------A--NG-------IG------------------------------HPFWVSRGVFGDLAEL--HGDKG 157 (199)
T ss_dssp -------------T--TE-------EE------------------------------EEEEEEGGGHHHHHTC--SSTTC
T ss_pred -------------C--Cc-------cc------------------------------CCEEEcHHHHHHHHhc--CCCHH
Confidence 1 11 00 0037788877765431 11111
Q ss_pred hhhhhHHhhhhc--CcEEEEEe-ccEEEecCCHHHHHHHHHHh
Q 010554 332 FGSEIIPAAIME--HDVQAYIF-RDYWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 332 ~~~dil~~li~~--~~V~~~~~-~gyw~dIgt~~~y~~An~~l 371 (507)
+..++++ .++..+.+ .++|.||+||+||..++..+
T Consensus 158 -----~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 158 -----VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp -----HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred -----HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 2233333 46888877 46899999999999998765
No 43
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.71 E-value=5.6e-17 Score=151.64 Aligned_cols=185 Identities=14% Similarity=0.186 Sum_probs=124.7
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 173 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~ 173 (507)
+|.+||||||.|+||. .||+|+|++|+ |||+|+++.+.++|+++|+|+++++.+.+.+++. .++
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~--------~~~-- 68 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMA--------LDG-- 68 (197)
T ss_dssp EEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSC--------CTT--
T ss_pred ceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhc--------cCC--
Confidence 5789999999999994 79999999999 9999999999999999999999988766655542 112
Q ss_pred eEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec--cCCHHHHHHHHHHcCCceEEEEEEc
Q 010554 174 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCAAV 251 (507)
Q Consensus 174 ~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~--~~dl~~ll~~h~~~~a~~tl~~~~~ 251 (507)
++++.... +..|++++++.+...+. ...+.++++.||+.+ ...+.++++. +.++++++...
T Consensus 69 -~~~~~~~~--------~~~g~~~~i~~al~~~~----~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~-- 131 (197)
T 2wee_A 69 -TDVVVVED--------VERGCAASLRVALARVH----PRATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY-- 131 (197)
T ss_dssp -SEEEECC------------CCHHHHHHHHTTSC----TTEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE--
T ss_pred -CEEEECCC--------cccCHHHHHHHHHHHhc----ccCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec--
Confidence 34443211 23599999999876552 123689999999933 4567888876 44444432211
Q ss_pred CCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCc
Q 010554 252 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 331 (507)
Q Consensus 252 ~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d 331 (507)
+ |+ +.. + ++|+++.|..+.. . .+ +
T Consensus 132 -------------~--g~-------~~~-----------------------P-------~~~~~~~l~~l~~-~-~~--~ 155 (197)
T 2wee_A 132 -------------A--DG-------VGH-----------------------P-------FWFSRTVFGELAR-L-HG--D 155 (197)
T ss_dssp -------------T--TE-------EEE-----------------------E-------EEEEGGGHHHHHT-C-CS--T
T ss_pred -------------C--CC-------cCC-----------------------C-------EEECHHHHHHHHh-C-CC--C
Confidence 1 11 000 0 2778887766542 1 11 1
Q ss_pred hhhhhHHhhhhc--CcEEEEEe-ccEEEecCCHHHHHHHHHH
Q 010554 332 FGSEIIPAAIME--HDVQAYIF-RDYWEDIGTIKSFYEANMA 370 (507)
Q Consensus 332 ~~~dil~~li~~--~~V~~~~~-~gyw~dIgt~~~y~~An~~ 370 (507)
. -+..+++. .++..+.. .++|.||+||+||..++..
T Consensus 156 ~---~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~~ 194 (197)
T 2wee_A 156 K---GVWKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLES 194 (197)
T ss_dssp T---HHHHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHTC
T ss_pred h---hHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHH
Confidence 1 12334443 46777776 4689999999999988753
No 44
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.71 E-value=3.7e-17 Score=153.23 Aligned_cols=130 Identities=21% Similarity=0.261 Sum_probs=93.9
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCe
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 174 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~ 174 (507)
|+|||||||.|+||.| +||+|+|++|+ |||+|+++.+.++|+++|+|+++++.+.+.+++.+.| . +. ..
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~-~----~~-~~ 69 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAY-K----DY-KN 69 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHT-T----TT-TE
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhc-c----CC-CC
Confidence 6899999999999998 89999999999 9999999999999999999999999888888887533 1 11 12
Q ss_pred EEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHHH-----cCCceEEE
Q 010554 175 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVD-----RDADITIS 247 (507)
Q Consensus 175 V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~~-----~~a~~tl~ 247 (507)
+.++... ..|++++++.+...+ .+.++++.||+ +...++.++++.|.+ .+.+..+.
T Consensus 70 ~~~~~~~----------~~g~~~si~~al~~~-------~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~ 132 (196)
T 3rsb_A 70 IVVIDTS----------GKGYIEDLNECIGYF-------SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAV 132 (196)
T ss_dssp EEE------------------CCCCCTTTTTC-------SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEE
T ss_pred EEEEECC----------CCCcHHHHHHHHHhC-------CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEE
Confidence 4444211 147777887765433 47899999999 456779999999987 56666666
Q ss_pred EEEcC
Q 010554 248 CAAVG 252 (507)
Q Consensus 248 ~~~~~ 252 (507)
+.+..
T Consensus 133 ~~p~~ 137 (196)
T 3rsb_A 133 MIPKE 137 (196)
T ss_dssp EEETT
T ss_pred EEEcc
Confidence 66654
No 45
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.66 E-value=4.5e-15 Score=142.75 Aligned_cols=214 Identities=13% Similarity=0.161 Sum_probs=136.0
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcC-CCEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
-|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++..... +. .+.. +..
T Consensus 13 ~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~---~~-~~~~----~~~ 80 (234)
T 1vpa_A 13 MNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEV---VE-KRVF----HEK 80 (234)
T ss_dssp CEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHH---HH-TTCC----CTT
T ss_pred cCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHH---HH-HHhc----cCC
Confidence 4789999999999998 3579999999999 99999999999998 999999998876433 11 2211 111
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ec-cCCHHHHHHHHHHcCCceEEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDRDADITISCAA 250 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~-~~dl~~ll~~h~~~~a~~tl~~~~ 250 (507)
.+... .. + .+..++++.++..+++ ...+.++++.||. +. ...+.++++.+.+.++ .+++.+
T Consensus 81 -~~~~~--~g--g-------~~~~~sv~~al~~~~~---~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~--~i~~~~ 143 (234)
T 1vpa_A 81 -VLGIV--EG--G-------DTRSQSVRSALEFLEK---FSPSYVLVHDSARPFLRKKHVSEVLRRARETGA--ATLALK 143 (234)
T ss_dssp -EEEEE--EC--C-------SSHHHHHHHHHHHHGG---GCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE--EEEEEE
T ss_pred -ceEEe--CC--C-------CcHHHHHHHHHHHhhh---cCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEe
Confidence 12211 11 0 1377888888776641 0135678888998 33 4568899988876543 344444
Q ss_pred cCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCC
Q 010554 251 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSN 330 (507)
Q Consensus 251 ~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~ 330 (507)
..+ ++..++++| | .+.++.. .+..-.-++|+...|.++++... ...
T Consensus 144 ~~~------~~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~-~~~ 189 (234)
T 1vpa_A 144 NSD------ALVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENGG-EWA 189 (234)
T ss_dssp CCS------EEEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTCC-CCS
T ss_pred cCC------cEEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhcC-CCC
Confidence 432 122335556 5 5544211 11112345889888877665311 011
Q ss_pred chhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010554 331 DFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 331 d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~ 373 (507)
+ ...++.. ...++..+..++.|.||+||+||..|+..+.+
T Consensus 190 ~-~~~~~~~--~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 229 (234)
T 1vpa_A 190 D-DTEPVQK--LGVKIALVEGDPLCFKVTFKEDLELARIIARE 229 (234)
T ss_dssp S-SHHHHHT--TTCCCEEEECCGGGCCCCSTTHHHHHHHHHHH
T ss_pred c-HHHHHHH--cCCcEEEEECCchhcCCCCHHHHHHHHHHHhc
Confidence 1 1122222 13567777767789999999999999876543
No 46
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.65 E-value=6.5e-16 Score=149.48 Aligned_cols=204 Identities=10% Similarity=0.018 Sum_probs=126.3
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCe
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 174 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~ 174 (507)
+.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++. +.+ + .. . .
T Consensus 26 ~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~~---~~~-~-----~~---~---~ 83 (236)
T 2px7_A 26 VSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPPG---AEP-P-----KG---L---G 83 (236)
T ss_dssp CEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECTT---CCC-C-----TT---C---S
T ss_pred eEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCHH---HHH-h-----hc---C---C
Confidence 5699999999999984 3 9999999999 999999999 67899999999861 111 1 11 1 1
Q ss_pred EEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ecc-CCHHHHHHHHHHcCCceEEEEEEcC
Q 010554 175 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYR-MDYMDFIQSHVDRDADITISCAAVG 252 (507)
Q Consensus 175 V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 252 (507)
++++. .. .|..++++.++..++ .+.+++++||+ +.. ..+..+++.+.+.++ .+.+.+..
T Consensus 84 v~~~~--~~---------~~~~~~i~~al~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~i~~~~~~ 144 (236)
T 2px7_A 84 AVFLE--GG---------ATRQASVARLLEAAS------LPLVLVHDVARPFVSRGLVARVLEAAQRSGA--AVPVLPVP 144 (236)
T ss_dssp CEEEE--CC---------SSHHHHHHHHHHHCC------SSEEEECCTTCCCCCHHHHHHHHHHHHHHSE--EEEEEECC
T ss_pred cEEEe--CC---------CchHHHHHHHHHHcC------CCeEEEecCccccCCHHHHHHHHHHHHhcCC--eEEEEecC
Confidence 34432 11 367888888876653 46799999997 333 457889988876543 34444443
Q ss_pred CCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCch
Q 010554 253 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDF 332 (507)
Q Consensus 253 ~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d~ 332 (507)
+ ... ..+ +|++..+.++.. ...+.. .++|+++.|.++++........+
T Consensus 145 ~--~~~----~~~-~G~v~~~~~~~~------------------------~~~~~~-~~~f~~~~l~~~~~~~~~~g~~~ 192 (236)
T 2px7_A 145 D--TLM----APE-GEAYGRVVPREA------------------------FRLVQT-PQGFFTALLREAHAYARRKGLEA 192 (236)
T ss_dssp S--EEE----EEC-SSSCEEEECGGG------------------------CEEECS-CEEEEHHHHHHHHHHHHHHTCCC
T ss_pred C--cEE----Eec-CCeEEecCChHh------------------------hccccC-CeEEcHHHHHHHHHHHHhcCCCc
Confidence 2 111 124 678776654211 012222 46788887766654321111111
Q ss_pred --hhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010554 333 --GSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 333 --~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An~~ll~ 373 (507)
...++.. ...++..+..+++|.||+||+||..|+..+..
T Consensus 193 ~d~~~ll~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 193 SDDAQLVQA--LGYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp SSHHHHHHH--TTCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred hhHHHHHHH--cCCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 1223322 24578888888899999999999999876643
No 47
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.65 E-value=4.2e-17 Score=168.64 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=61.7
Q ss_pred eEEEEcCceeccC--CHHHHHHHHHHcCCceEEEEEEcCCCCCccceEEEECC--CCcEEEEEeCCCccccccccccccc
Q 010554 216 NVAILCGDHLYRM--DYMDFIQSHVDRDADITISCAAVGESRASDYGLVKIDN--MGRIAQFAEKPSGANLKAMQVDTSL 291 (507)
Q Consensus 216 ~~lVl~gD~i~~~--dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id~--~grV~~~~eKp~~~~~~~~~~~~~~ 291 (507)
.=|+--||++|+| ||.+++++|. +|+.. .+++..||+..+++ +++| .|.|||+....
T Consensus 12 ~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~--------- 72 (374)
T 2iu8_A 12 SGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH--------- 72 (374)
T ss_dssp ---------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH---------
T ss_pred cCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh---------
Confidence 4577789999998 8999999995 36553 33466799988874 4577 99999974321
Q ss_pred cCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCchhhhhHHhhhhcCcEEEEEeccEEEe
Q 010554 292 LGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDFGSEIIPAAIMEHDVQAYIFRDYWED 357 (507)
Q Consensus 292 ~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d~~~dil~~li~~~~V~~~~~~gyw~d 357 (507)
..++++|+|+|++++|..+. +| .+++| ++.+.+.++|.+..+|++
T Consensus 73 -----------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~~~~a~~~~~~~~~ 117 (374)
T 2iu8_A 73 -----------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSESPSLVFQKCLELFI 117 (374)
T ss_dssp -----------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSCHHHHHHHHHTTTS
T ss_pred -----------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCCHHHHHHHHHHHhc
Confidence 14679999999999874221 12 45566 555555444444444554
No 48
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.63 E-value=5.3e-15 Score=157.45 Aligned_cols=210 Identities=18% Similarity=0.234 Sum_probs=141.8
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceee---cCcchhhHHHHHHHHh--------cC----CCEEEEEeccCchHHHH
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPV---AGCYRLIDIPMSNCIN--------SG----INKIFVLTQFNSASLNR 157 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI---~g~ypLId~~L~~l~~--------~G----i~~I~Vv~~~~~~~l~~ 157 (507)
.+|.+||||||.||||. ...||+|+|| .|+ |+|++.++.+.. .| +..+++...+..+.+.+
T Consensus 101 ~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~ 176 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKE 176 (505)
T ss_dssp TCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHH
T ss_pred CceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHH
Confidence 67999999999999995 5799999999 799 999999999876 36 77776667777889999
Q ss_pred HHHhc-ccCCCcccCCCeEEEecCc-----cCCC-------CCCCCcccChHHHHHHHHH--HHHhhhcCCCCeEEEEcC
Q 010554 158 HIART-YFGNGTNFGDGFVEVLAAT-----QTPG-------ESGKNWFQGTADAVRQFTW--VFEDAKNRNIENVAILCG 222 (507)
Q Consensus 158 ~l~~~-~~~~~~~~~~~~V~vl~~~-----q~~~-------~~~~~~~~Gta~AL~~~~~--~l~~~~~~~~~~~lVl~g 222 (507)
|+.+. ||+... ..|.+.... ...+ ..-...+.|||++++.+.. .+++......++|+|+++
T Consensus 177 ~f~~~~~fGl~~----~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~ 252 (505)
T 1jv1_A 177 FFTKHKYFGLKK----ENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCV 252 (505)
T ss_dssp HHHHTGGGGSCG----GGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEET
T ss_pred HHHhhhhcCCCc----CceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEEC
Confidence 98742 243210 013222100 0000 0001235799999987643 222222234689999999
Q ss_pred cee-ccCCHHHHHHHHHHcCCceEEEEEE-cCCCCCccceEEEECCCCc--EEEEEeCCCccccccccccccccCCCccc
Q 010554 223 DHL-YRMDYMDFIQSHVDRDADITISCAA-VGESRASDYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQE 298 (507)
Q Consensus 223 D~i-~~~dl~~ll~~h~~~~a~~tl~~~~-~~~~~~~~~g~v~id~~gr--V~~~~eKp~~~~~~~~~~~~~~~~~~~~~ 298 (507)
|++ ...+...++.+|..+++++++.+.+ ... .+.+|++..+ +|+ |+++.|+|..... ..+ +..
T Consensus 253 Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~--~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~---~~~-------~~g 319 (505)
T 1jv1_A 253 DNILVKVADPRFIGFCIQKGADCGAKVVEKTNP--TEPVGVVCRV-DGVYQVVEYSEISLATAQ---KRS-------SDG 319 (505)
T ss_dssp TBTTCCTTCHHHHHHHHHTTCSEEEEEEECCST--TCSCCEEEEE-TTEEEEECGGGSCHHHHH---CBC-------TTS
T ss_pred CccccccchHHHHHHHHHcCCCEEEEEEEccCC--ccCcceEEEE-CCeEEEEEEeeCCHHHhh---hcc-------ccc
Confidence 996 7777778999999999999999886 433 4679988775 455 4555556542211 000 000
Q ss_pred cccCCceeeeEEEEEeHHHHHHHHHh
Q 010554 299 ARKCPYVASMGVYVFKKDVLFKLLRW 324 (507)
Q Consensus 299 ~~~~~~l~~~Giyif~~~iL~~ll~~ 324 (507)
....+.+++|+|+|+.++|.++.+.
T Consensus 320 -~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 320 -RLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp -SBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred -ccccceeeEEEEEecHHHHHHHHHh
Confidence 0123689999999999999988763
No 49
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.61 E-value=2.1e-14 Score=138.56 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=145.2
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhc-CCCEEEEEeccCc-hHHHHHHHhcccCCCcccC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINS-GINKIFVLTQFNS-ASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~-Gi~~I~Vv~~~~~-~~l~~~l~~~~~~~~~~~~ 171 (507)
.+.|||||||.|+||. ...||+|+|++|+ |||+|+++.+..+ .+++|+|++++.. +.+.+++..
T Consensus 7 ~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~---------- 72 (231)
T 3q80_A 7 EVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH---------- 72 (231)
T ss_dssp CEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG----------
T ss_pred ceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC----------
Confidence 4789999999999997 3689999999999 9999999999987 4999999998875 344433321
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ec-cCCHHHHHHHHHHcCCceEEEEE
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDRDADITISCA 249 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~-~~dl~~ll~~h~~~~a~~tl~~~ 249 (507)
.+.++... .+..++++.++..+.+. ...+.++++.||. +. ...+..+++.+.+ +.+..+...
T Consensus 73 --~v~~v~gg-----------~~r~~sv~~gl~~~~~~--~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~ 136 (231)
T 3q80_A 73 --RAMIVAGG-----------SNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVL 136 (231)
T ss_dssp --GCEEEECC-----------SSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred --CeEEEcCC-----------CchHHHHHHHHHHhhhc--CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEE
Confidence 13343211 13468888887666420 0136789999998 33 4557888888865 245567777
Q ss_pred EcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCC-
Q 010554 250 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT- 328 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~- 328 (507)
++.++ +...+++|+|....+. ... ..+.+ -++|+.+.|.+.++.....
T Consensus 137 p~~dt------~~~~~~~g~v~~~~~r---~~l---------------------~~~qT-Pq~F~~~~L~~a~~~~~~~n 185 (231)
T 3q80_A 137 PLSDT------IKAVDANGVVLGTPER---AGL---------------------RAVQT-PQGFTTDLLLRSYQRGSLDL 185 (231)
T ss_dssp CCSSC------EEEECTTSBEEECCCG---GGE---------------------EEECS-CEEEEHHHHHHHHHHHTC--
T ss_pred eccCC------EEEEcCCCcEEEecch---hhe---------------------EEEcC-CcEEEHHHHHHHHHHHHhhc
Confidence 76652 1224677887765421 111 33455 4899999998887764331
Q ss_pred CCchhhhhHHhhh-hcCcEEEEEeccEEEecCCHHHHHHHHHHh
Q 010554 329 SNDFGSEIIPAAI-MEHDVQAYIFRDYWEDIGTIKSFYEANMAL 371 (507)
Q Consensus 329 ~~d~~~dil~~li-~~~~V~~~~~~gyw~dIgt~~~y~~An~~l 371 (507)
...+.+|....+. ...+|..+.-+..++.|+||+|+..|+..+
T Consensus 186 ~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 186 PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp ---CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 1122344332222 346787777666789999999999998765
No 50
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.57 E-value=6.1e-15 Score=139.08 Aligned_cols=179 Identities=10% Similarity=0.047 Sum_probs=112.2
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
.++.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+|++++... +++ . +
T Consensus 13 ~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~-----~-----~- 71 (201)
T 2e8b_A 13 KVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSF-----L-----N- 71 (201)
T ss_dssp SCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGG-----G-----T-
T ss_pred cCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhc-----C-----C-
Confidence 35799999999999997 79999999999 9999999999988 9999999987653 111 1 1
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceec-cC-CHHH-HHHHHHHcCCceEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RM-DYMD-FIQSHVDRDADITISCA 249 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~-~~-dl~~-ll~~h~~~~a~~tl~~~ 249 (507)
++++.... +..|++++++.+...++ .+.+++++||+.+ +. .+.. ++ +.++++.
T Consensus 72 --~~~v~~~~--------~~~g~~~~i~~al~~~~------~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~-- 127 (201)
T 2e8b_A 72 --APVVLDEF--------EESASIIGLYTALKHAK------EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS-- 127 (201)
T ss_dssp --CCEEECCC--------SSCCHHHHHHHHHHHCS------SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE--
T ss_pred --ceEEecCC--------CCCCcHHHHHHHHHHcC------CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE--
Confidence 23333211 12599999999987663 4789999999944 33 2444 44 1222110
Q ss_pred EcCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCC
Q 010554 250 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 329 (507)
Q Consensus 250 ~~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~ 329 (507)
.+ +|+ .....|+| |+++++..+.+....+.
T Consensus 128 --------------~~-~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~g~ 157 (201)
T 2e8b_A 128 --------------VA-KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKKGD 157 (201)
T ss_dssp --------------EE-ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHTTC
T ss_pred --------------ec-CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHcCC
Confidence 00 010 13467999 99997765433211222
Q ss_pred CchhhhhHHhhhhcCcEEEEEec--cEEE--ecCCHHHHHHHHHHh
Q 010554 330 NDFGSEIIPAAIMEHDVQAYIFR--DYWE--DIGTIKSFYEANMAL 371 (507)
Q Consensus 330 ~d~~~dil~~li~~~~V~~~~~~--gyw~--dIgt~~~y~~An~~l 371 (507)
. ...++++. .++..+.++ +.|. |||||+||.+++..+
T Consensus 158 ~-~~~~~l~~----~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 158 Y-RIWALLKD----VGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp C-CHHHHHHH----HCCEEEECCGGGGGGGCCSCCC----------
T ss_pred c-hHHHHHHH----CCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 2 23444443 356666664 5799 999999998887543
No 51
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.54 E-value=8.1e-14 Score=131.45 Aligned_cols=111 Identities=10% Similarity=0.094 Sum_probs=82.8
Q ss_pred CCceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccC
Q 010554 92 PKNVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 171 (507)
Q Consensus 92 ~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~ 171 (507)
|.++.+||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|+++++.+.+ . . ++
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~----~-~-------~~ 65 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIY----Q-A-------SG 65 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHH----H-T-------TS
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHH----h-h-------cC
Confidence 346899999999999997 379999999999 999999999984 6999999998875432 1 1 11
Q ss_pred CCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-eccC-CHHHHHHH
Q 010554 172 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYRM-DYMDFIQS 236 (507)
Q Consensus 172 ~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~~~-dl~~ll~~ 236 (507)
++++.... .+ ..|++++++.+...++ .+.++++.||+ +... .+..+++.
T Consensus 66 ---~~~v~~~~-~~------~~G~~~si~~~l~~~~------~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 66 ---LKVIEDSL-AD------YPGPLAGMLSVMQQEA------GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp ---CCEECCCT-TC------CCSHHHHHHHHHHHCC------SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred ---CeEEecCC-CC------CCCHHHHHHHHHHhCC------CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 23332211 10 1599999999887663 47899999999 4444 46777765
No 52
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.51 E-value=1.7e-14 Score=135.59 Aligned_cols=181 Identities=12% Similarity=0.172 Sum_probs=111.6
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCe
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 174 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~ 174 (507)
+.+||||||.|+||. .||+|+|++|+ |||+|+++.+..+ +|+|+++++.+.+. .++. .+
T Consensus 3 ~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~-----~~~~----~~--- 61 (197)
T 3d5n_A 3 IGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEML-----PLLM----DQ--- 61 (197)
T ss_dssp EEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHG-----GGCT----TS---
T ss_pred eEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHH-----HHhc----CC---
Confidence 789999999999997 39999999999 9999999999877 88899988754442 2222 12
Q ss_pred EEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-ecc-CCHHHHHHHHHHcCCceEEEEEEcC
Q 010554 175 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYR-MDYMDFIQSHVDRDADITISCAAVG 252 (507)
Q Consensus 175 V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 252 (507)
+ ++... .|..|++++++.++..+. ..+.+++++||+ +.. ..+.++++.+ +.++++++...
T Consensus 62 ~-~v~~~--------~~~~G~~~si~~al~~~~-----~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~--- 123 (197)
T 3d5n_A 62 I-VIYNP--------FWNEGISTSLKLGLRFFK-----DYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH--- 123 (197)
T ss_dssp C-EEECT--------TGGGCHHHHHHHHHHHTT-----TSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE---
T ss_pred E-EEECC--------CCCCCHHHHHHHHHHhhc-----cCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe---
Confidence 3 33211 123699999999987764 136899999999 434 4577888776 44555433221
Q ss_pred CCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCch
Q 010554 253 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDF 332 (507)
Q Consensus 253 ~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d~ 332 (507)
+ |+ +.. + .+|+++.|..+.+ . ....+
T Consensus 124 ------------~--g~-------~~~-----------------------P-------~~~~~~~l~~l~~-l-~g~~~- 149 (197)
T 3d5n_A 124 ------------K--GE-------RGN-----------------------P-------VLISKSLFNEIEK-L-RGDVG- 149 (197)
T ss_dssp ------------T--TE-------ECS-----------------------C-------EEEEHHHHHHHHH-C-CTTCC-
T ss_pred ------------C--Cc-------ccC-----------------------C-------EEECHHHHHHHHc-c-CCCcc-
Confidence 0 10 000 1 2788888876652 2 22222
Q ss_pred hhhhHHhhhhc--CcEEEEEec--cEEEecCCHHHHHHHHHHhh
Q 010554 333 GSEIIPAAIME--HDVQAYIFR--DYWEDIGTIKSFYEANMALT 372 (507)
Q Consensus 333 ~~dil~~li~~--~~V~~~~~~--gyw~dIgt~~~y~~An~~ll 372 (507)
.. .++++ .++..+..+ +.|.||+||+||..++..+.
T Consensus 150 ~~----~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~ 189 (197)
T 3d5n_A 150 AR----VILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFHP 189 (197)
T ss_dssp TH----HHHTTSCGGGEEEEECCGGGTCCTTTC-----------
T ss_pred HH----HHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhhc
Confidence 12 22333 356666664 57999999999988876543
No 53
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.51 E-value=2.9e-13 Score=143.42 Aligned_cols=212 Identities=14% Similarity=0.115 Sum_probs=138.3
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeec-CcchhhHHHHHHHHhcCCC-----EEEEEe-ccCchHHHHHHH-h-ccc
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVA-GCYRLIDIPMSNCINSGIN-----KIFVLT-QFNSASLNRHIA-R-TYF 164 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~-g~ypLId~~L~~l~~~Gi~-----~I~Vv~-~~~~~~l~~~l~-~-~~~ 164 (507)
++.+||||||.||||+ ...||+|+||+ |+ |+|++.++.+...|.. .++|.+ .+..+.+.+|+. + .||
T Consensus 75 k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~f 150 (505)
T 2oeg_A 75 STVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPWL 150 (505)
T ss_dssp TEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHHH
T ss_pred cceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhcc
Confidence 7899999999999999 67999999999 99 9999999999987633 455555 555888889986 3 234
Q ss_pred CCC---cc-cCCCeEEEecCcc-C---C--CCCCCCcccChHHHHHHHH--HHHHhhhcCCCCeEEEEcCceecc-CCHH
Q 010554 165 GNG---TN-FGDGFVEVLAATQ-T---P--GESGKNWFQGTADAVRQFT--WVFEDAKNRNIENVAILCGDHLYR-MDYM 231 (507)
Q Consensus 165 ~~~---~~-~~~~~V~vl~~~q-~---~--~~~~~~~~~Gta~AL~~~~--~~l~~~~~~~~~~~lVl~gD~i~~-~dl~ 231 (507)
+.. .. |.+..+-.+.... . . .......+.|||++++.+. ..+++....+.++++|.++|.+.. .|+
T Consensus 151 Gl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~- 229 (505)
T 2oeg_A 151 YQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK- 229 (505)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-
T ss_pred CCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-
Confidence 321 11 2111122111100 0 0 0001123579999997541 012221123568999999999884 577
Q ss_pred HHHHHHHHcCCceEEEEEEcCCCCCccceEEEEC------CCCc---------EEEEEeCCCccccccccccccccCCCc
Q 010554 232 DFIQSHVDRDADITISCAAVGESRASDYGLVKID------NMGR---------IAQFAEKPSGANLKAMQVDTSLLGFSP 296 (507)
Q Consensus 232 ~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id------~~gr---------V~~~~eKp~~~~~~~~~~~~~~~~~~~ 296 (507)
.++.+|.++++++++.+.+..... ..+|++..+ .+|+ ++++.|-|....... + +.
T Consensus 230 ~llg~~~~~~ad~~~~v~~k~~~d-~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~----~---g~-- 299 (505)
T 2oeg_A 230 RVLAYMEKEKIDFLMEVCRRTESD-KKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF----Q---DI-- 299 (505)
T ss_dssp HHHHHHHHHTCSEEEEEEECCTTC-CSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH----H---CT--
T ss_pred HHHHHHHhcCCcEEEEEEEecCCc-cceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc----c---Cc--
Confidence 999999999999999998876621 468888772 4577 334334443221100 0 00
Q ss_pred cccccCCceeeeEEEEEeHHHHHHHHHh
Q 010554 297 QEARKCPYVASMGVYVFKKDVLFKLLRW 324 (507)
Q Consensus 297 ~~~~~~~~l~~~Giyif~~~iL~~ll~~ 324 (507)
....+.++....|+-+.|.++++.
T Consensus 300 ----~~f~~~Ninn~~~~l~~l~~~~~~ 323 (505)
T 2oeg_A 300 ----NKYSFFNTNNLWIRLPVLLETMQE 323 (505)
T ss_dssp ----TTTCEEEEEEEEEEHHHHHHHHHH
T ss_pred ----cccCeeEEEEEEEEHHHHHHHHhh
Confidence 012458999999999999988875
No 54
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.43 E-value=1.6e-12 Score=137.86 Aligned_cols=217 Identities=17% Similarity=0.250 Sum_probs=142.4
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeec---CcchhhHHHHHHHHhc--------C------CCEEEEEeccCchHH
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVA---GCYRLIDIPMSNCINS--------G------INKIFVLTQFNSASL 155 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~---g~ypLId~~L~~l~~~--------G------i~~I~Vv~~~~~~~l 155 (507)
.++.+||||||.||||. ...||+|+||+ |+ |+|++.++.+... | |..+++.+.+..+.+
T Consensus 102 gkvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp TCEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CCeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 47999999999999994 78999999999 99 9999999999886 6 888888888888989
Q ss_pred HHHHHhc-ccCCCcc----cCCCeEEEecCcc--CC---CCCCCCcccChHHHHHHHHH--HHHhhhcCCCCeEEEEcCc
Q 010554 156 NRHIART-YFGNGTN----FGDGFVEVLAATQ--TP---GESGKNWFQGTADAVRQFTW--VFEDAKNRNIENVAILCGD 223 (507)
Q Consensus 156 ~~~l~~~-~~~~~~~----~~~~~V~vl~~~q--~~---~~~~~~~~~Gta~AL~~~~~--~l~~~~~~~~~~~lVl~gD 223 (507)
.+|+.+. ||+.... |.+..+-.+..+. -. ...-...+.|+|+.++.... .+++....+.+.+.+.+.|
T Consensus 178 ~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vD 257 (486)
T 2yqc_A 178 ESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVD 257 (486)
T ss_dssp HHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETT
T ss_pred HHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCC
Confidence 9999753 3543211 1111111111100 00 00000135799998875532 2333323467899999999
Q ss_pred eecc--CCHHHHHHHHHHcCCceEEEEEEcCCCCCccceEEEECC-CC--cEEEEEeCCCccccccccccccccCCCccc
Q 010554 224 HLYR--MDYMDFIQSHVDRDADITISCAAVGESRASDYGLVKIDN-MG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQE 298 (507)
Q Consensus 224 ~i~~--~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id~-~g--rV~~~~eKp~~~~~~~~~~~~~~~~~~~~~ 298 (507)
.+.- .| ..++..|..+++++++.+.+...+ ...+|++.... +| +|+++.|+|...... .+.. .+.
T Consensus 258 N~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~-~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~---~~~~----~~~- 327 (486)
T 2yqc_A 258 NCLVKVAD-PIFIGFAIAKKFDLATKVVRKRDA-NESVGLIVLDQDNQKPCVIEYSEISQELANK---KDPQ----DSS- 327 (486)
T ss_dssp BTTCCTTC-HHHHHHHHHHTCSEEEEEEECCST-TCCCCEEEEETTTTEEEEECGGGSCHHHHHC---EETT----EEE-
T ss_pred CceeeccC-HHHHHHHHHcCCCEEEEEEEcCCC-CCceeEEEEEecCCCEEEEEEecCCHHHhhc---cccc----ccc-
Confidence 8553 45 468899999999999988876432 24678877531 45 478888887532110 0000 000
Q ss_pred cccCCceeeeEEEEEeHHHHHHHHHh
Q 010554 299 ARKCPYVASMGVYVFKKDVLFKLLRW 324 (507)
Q Consensus 299 ~~~~~~l~~~Giyif~~~iL~~ll~~ 324 (507)
....+..|+|+|+|+.++|...++.
T Consensus 328 -~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 328 -KLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp -EESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred -cccccceeEEEEEEeHHHHHHHHHh
Confidence 0123688999999999999885554
No 55
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.42 E-value=5.2e-12 Score=129.98 Aligned_cols=209 Identities=13% Similarity=0.127 Sum_probs=143.6
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceee---cCcchhhHHHHHHHHh-------------cCCCEEEEEeccCchHHH
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPV---AGCYRLIDIPMSNCIN-------------SGINKIFVLTQFNSASLN 156 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI---~g~ypLId~~L~~l~~-------------~Gi~~I~Vv~~~~~~~l~ 156 (507)
.++.+|+||||.||||. ...||+|+|| .|+ |++++.++.+.+ .+|.-+++...+..+.+.
T Consensus 34 gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 34 GKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp TCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred CceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 57899999999999995 5899999999 899 999999988853 578766666678888999
Q ss_pred HHHHhc-ccCCCcccCCCeEEEecCccCC--CCCC----------CCcccChHHHHHHHH--HHHHhhhcCCCCeEEEEc
Q 010554 157 RHIART-YFGNGTNFGDGFVEVLAATQTP--GESG----------KNWFQGTADAVRQFT--WVFEDAKNRNIENVAILC 221 (507)
Q Consensus 157 ~~l~~~-~~~~~~~~~~~~V~vl~~~q~~--~~~~----------~~~~~Gta~AL~~~~--~~l~~~~~~~~~~~lVl~ 221 (507)
+++.+. ||+... ..|.+.....-+ ..++ ...+.|+|+..+... ..+++....+.+.++|.+
T Consensus 110 ~~f~~~~~fGl~~----~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~n 185 (405)
T 3oc9_A 110 NYFKEHQYFGLSS----EQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHN 185 (405)
T ss_dssp HHHHHTGGGGSCT----TSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEC
T ss_pred HHHHhCcccCCCc----cceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEe
Confidence 999753 354321 012221100000 0000 122579998887643 233333334668999999
Q ss_pred Cce-eccCCHHHHHHHHHHcCCceEEEEEEcCCCCCccceEEEE-CCCCcEEEEEeCCCccccccccccccccCCCcccc
Q 010554 222 GDH-LYRMDYMDFIQSHVDRDADITISCAAVGESRASDYGLVKI-DNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEA 299 (507)
Q Consensus 222 gD~-i~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~i-d~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~ 299 (507)
.|. +.......++.+|..+++++++-+.+...+. ...|++.. |...+|+++.|.|.. ... -..+.
T Consensus 186 vDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~d-ek~Gvl~~~dg~~~vvEysei~~e-~e~-~~~~g---------- 252 (405)
T 3oc9_A 186 VDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKE-EKVGVLVKEQERIKVVEYTELTDE-LNK-QLSNG---------- 252 (405)
T ss_dssp TTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTT-CSCCEEEEETTEEEEECGGGCCTT-TTC-BCTTS----------
T ss_pred CCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCC-CccceEEEECCeeEEEEEeeCCHH-Hhh-cCCCC----------
Confidence 999 8888888999999999999999988876521 46887764 544478888887765 211 00110
Q ss_pred ccCCceeeeEEEEEeHHHHHHHH
Q 010554 300 RKCPYVASMGVYVFKKDVLFKLL 322 (507)
Q Consensus 300 ~~~~~l~~~Giyif~~~iL~~ll 322 (507)
....+..|.++++|+.++|.+++
T Consensus 253 ~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 253 EFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp CBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ceeeccceeEeeecCHHHHHHhh
Confidence 01235788999999999998875
No 56
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.35 E-value=8.2e-13 Score=135.86 Aligned_cols=196 Identities=14% Similarity=0.114 Sum_probs=124.3
Q ss_pred ceEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHh-cCCCEEEEEeccCchHHHHHHHhcccCCCcccCC
Q 010554 94 NVAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCIN-SGINKIFVLTQFNSASLNRHIARTYFGNGTNFGD 172 (507)
Q Consensus 94 ~~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~-~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~ 172 (507)
++.+||||||.|+||. ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ ..+.+. .+...
T Consensus 3 ki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~-----~~~~~------ 66 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMK-----KFTKN------ 66 (371)
T ss_dssp CEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHH-----TTCSS------
T ss_pred ccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHH-----HHhCC------
Confidence 5889999999999997 3579999999999 999999999998 58999999998 433332 22111
Q ss_pred CeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee-c-cCCHHHHHHHHHHcCCceEEEEEE
Q 010554 173 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL-Y-RMDYMDFIQSHVDRDADITISCAA 250 (507)
Q Consensus 173 ~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i-~-~~dl~~ll~~h~~~~a~~tl~~~~ 250 (507)
++++. .. .|..++++.++..++ .+.++++.||.- . ...+.++++.+.+.+ .++.+.+
T Consensus 67 --v~~v~--~g---------~g~~~sv~~aL~~l~------~d~vlv~~~D~Pli~~~~i~~li~~~~~~~--a~i~~~~ 125 (371)
T 1w55_A 67 --YEFIE--GG---------DTRAESLKKALELID------SEFVMVSDVARVLVSKNLFDRLIENLDKAD--CITPALK 125 (371)
T ss_dssp --SEEEE--CC---------SSHHHHHHHHHTTCC------SSEEEEEETTCTTCCHHHHHHHHTTGGGCS--EEEEEEC
T ss_pred --CEEEe--CC---------CChHHHHHHHHHhcC------CCeEEEEeCCcccCCHHHHHHHHHHHHhcC--CEEEEEE
Confidence 33331 11 377889988865542 478999999983 3 445788888776553 3444444
Q ss_pred cCCCCCccceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeee-EEEEEeHHHHHHHHHhhCCCC
Q 010554 251 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASM-GVYVFKKDVLFKLLRWRYPTS 329 (507)
Q Consensus 251 ~~~~~~~~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Giyif~~~iL~~ll~~~~~~~ 329 (507)
+.+. +.. + .+.+... .+... .-++|+.+.|.++++... ..
T Consensus 126 ~~d~-------vk~-----v---~~t~~r~-----------------------~l~~~~~P~~f~~~~l~~~~~~~~-~~ 166 (371)
T 1w55_A 126 VADT-------TLF-----D---NEALQRE-----------------------KIKLIQTPQISKTKLLKKALDQNL-EF 166 (371)
T ss_dssp CCSC-------EEE-----T---TEEECGG-----------------------GCCEECSCEEEEHHHHHHHTSSCC-CC
T ss_pred eecC-------eee-----e---eeecCcc-----------------------ceeecCCcceecHHHHHHHHHhcc-cc
Confidence 4331 000 0 0111110 01111 125688887766554321 01
Q ss_pred CchhhhhHHhhhhcCcEEEEEeccEEEecCCHHHHHHHH
Q 010554 330 NDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEAN 368 (507)
Q Consensus 330 ~d~~~dil~~li~~~~V~~~~~~gyw~dIgt~~~y~~An 368 (507)
.+ ...++.. ...++..+..++.|.||+||+||..|+
T Consensus 167 td-~~~ll~~--~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 167 TD-DSTAIAA--MGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp SS-HHHHHHT--TTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred cC-HHHHHHh--CCCcEEEEECCccccCCCCHHHHHHHH
Confidence 11 1122221 236788888777899999999998887
No 57
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.34 E-value=2.1e-11 Score=115.54 Aligned_cols=115 Identities=13% Similarity=0.158 Sum_probs=82.0
Q ss_pred eEEEEEcCCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEEEEEeccCchHHHHHHHhcccCCCcccCCCe
Q 010554 95 VAAIILGGGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 174 (507)
Q Consensus 95 ~~aVILAaG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~ 174 (507)
|.|||||||.|+||. .||+|+|++|+ |||+|+++.+..+ +|+|++++ .+.+ +.+.+. ++
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~-~~~~~~-------~~--- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQA-EKLSSR-------YE--- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHH-HHHHTT-------SC---
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHH-HHHHHh-------cC---
Confidence 689999999999996 69999999999 9999999999876 89999874 2333 233211 22
Q ss_pred EEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCce-eccC-CHHHHHHHHHHcCCceEE
Q 010554 175 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYRM-DYMDFIQSHVDRDADITI 246 (507)
Q Consensus 175 V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~-i~~~-dl~~ll~~h~~~~a~~tl 246 (507)
++++.... . -.|..++++.++..+ .+.+ ++.||+ +... .+..+++.+.+.++++++
T Consensus 60 ~~~v~d~~-~-------~~G~~~si~~gl~~~-------~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 60 AEFIWDLH-K-------GVGSIAGIHAALRHF-------GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp SCEECCTT-C-------CCSHHHHHHHHHHHH-------SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CeEEecCC-C-------CCChHHHHHHHHHHc-------CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 23443221 1 147889999887665 2677 999999 3343 468888877765666543
No 58
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.28 E-value=2.1e-13 Score=132.25 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=21.8
Q ss_pred hhcCcEEEEEeccE----EEecCCHHHHHHHHHHhhc
Q 010554 341 IMEHDVQAYIFRDY----WEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 341 i~~~~V~~~~~~gy----w~dIgt~~~y~~An~~ll~ 373 (507)
....++++|...+| |.|+++ |+++|+.+++
T Consensus 36 ~~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~ 69 (240)
T 3r8y_A 36 PETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIV 69 (240)
T ss_dssp CTTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEE
T ss_pred CCcceEEEcCCCeEEEccHHHHHH---HHHhccceec
Confidence 34567777766666 888877 8899987764
No 59
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.17 E-value=2.5e-12 Score=136.32 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=51.0
Q ss_pred CCceec-ceeee-ceEEcCCcEEc-cceEeeeeE---EeeccCceEe-eeecCCCcceeeCCCcEEeeeEeCCCCEECCC
Q 010554 395 PPTKID-NCRIK-DAIISHGCFLR-ECTVEHSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKD 467 (507)
Q Consensus 395 ~p~~i~-~~~I~-~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~ 467 (507)
+++.++ .+.+. ++.||++|.|+ +|.|.+++| +.++.++.|. ++|+++ |.||.++.|.+|+||++|.||.+
T Consensus 278 ~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~---~~Ig~~a~I~gv~IGd~v~IG~~ 354 (496)
T 3c8v_A 278 SGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERN---CVTAHGGKIINAHLGDMIFTGFN 354 (496)
T ss_dssp TTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEES---CEECTTCEEESEEEEETCEECTT
T ss_pred CCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCC---CEECCCcEEcCceECCCcEECCC
Confidence 334444 23333 56666666665 456655555 2455555553 666888 78888888888888888888888
Q ss_pred cEEecC
Q 010554 468 VVIVNK 473 (507)
Q Consensus 468 ~~i~~~ 473 (507)
++|..+
T Consensus 355 a~I~~~ 360 (496)
T 3c8v_A 355 SFLQGS 360 (496)
T ss_dssp CEEECC
T ss_pred CEEeCC
Confidence 888765
No 60
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.00 E-value=5e-10 Score=108.86 Aligned_cols=65 Identities=15% Similarity=0.247 Sum_probs=47.7
Q ss_pred eeecCCCcceeeCCCcEEee-eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 436 SLLAEGKVPIGVGRNTKIRN-CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n-sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
++++++ +.||++|.|.+ ++||++|.||.++.|.+ ..+++...+..|..+ .| +.|++++.|++|++
T Consensus 141 v~IG~~---v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV-~~-~~I~~~~~v~~g~v 206 (247)
T 1qre_A 141 VYIGNN---VSLAHQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAA-IG-VTIPDGRYIPAGMV 206 (247)
T ss_dssp EEECTT---CEECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEE-ES-CEECTTBEECTTCE
T ss_pred eEECCC---CEECCCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCCEE-CC-eEeCCCCEECCCCE
Confidence 677888 88999999998 99999999999999987 555555544444444 33 34567777776665
No 61
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.94 E-value=7e-09 Score=106.21 Aligned_cols=40 Identities=3% Similarity=-0.127 Sum_probs=20.7
Q ss_pred EEEecCCHHHHHHHHHHhhccCCCccccCCCCCcccCCCc
Q 010554 354 YWEDIGTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRF 393 (507)
Q Consensus 354 yw~dIgt~~~y~~An~~ll~~~~~~~~~~~~~~i~~~~~~ 393 (507)
.|.-+.+|...+.....++.+.+.....++...+.....+
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~~~i~p~a~I~~~a~i 117 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISSTGIESTARIHPSAVI 117 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCCCEECTTCEECTTCEE
T ss_pred cEEEECCHHHHHHHHHHHhccccccCeeCCCCEECCCCEE
Confidence 3566778887666555555543322344444444433333
No 62
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.92 E-value=1.9e-08 Score=94.02 Aligned_cols=15 Identities=7% Similarity=0.302 Sum_probs=9.3
Q ss_pred EEEcCCCEeCCCccC
Q 010554 493 TIIMEKATIEDGMVI 507 (507)
Q Consensus 493 ~vig~~~~i~~gt~i 507 (507)
++||++++|++|+++
T Consensus 162 ~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 162 LSLADDSILGGGATL 176 (194)
T ss_dssp CEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEE
Confidence 456666666666653
No 63
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.91 E-value=1.5e-08 Score=103.02 Aligned_cols=45 Identities=9% Similarity=0.060 Sum_probs=23.5
Q ss_pred EecCCHHHHHHHHHHhhccCC-CccccCCCCCcccCCCcCCCceec
Q 010554 356 EDIGTIKSFYEANMALTKESP-AFHFYDPKTPFYTSPRFLPPTKID 400 (507)
Q Consensus 356 ~dIgt~~~y~~An~~ll~~~~-~~~~~~~~~~i~~~~~~~~p~~i~ 400 (507)
.-+.+|...+.....++.+.+ .....++...+.....+.+.+.|+
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~ 119 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIG 119 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEEC
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEEC
Confidence 446778876666555555432 223445555555444444444443
No 64
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.91 E-value=6.5e-09 Score=102.99 Aligned_cols=40 Identities=15% Similarity=0.060 Sum_probs=20.3
Q ss_pred eeecCCCcceeeCCCcEEee--------eEeCCCCEECCCcEEecCCCCcc
Q 010554 436 SLLAEGKVPIGVGRNTKIRN--------CIIDKNVKIGKDVVIVNKDDVQE 478 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n--------sIIg~na~Ig~~~~i~~~~~~~e 478 (507)
..|+++ +.|+++++|.. ++||+++.|+.++.|.+.+.+++
T Consensus 101 v~IG~~---~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~ 148 (283)
T 4eqy_A 101 LVIGDR---NTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGS 148 (283)
T ss_dssp EEECSS---CEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECS
T ss_pred EEECCC---cccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECC
Confidence 455555 55666666653 55555555554444433333333
No 65
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.89 E-value=1.6e-08 Score=104.14 Aligned_cols=43 Identities=12% Similarity=0.009 Sum_probs=21.5
Q ss_pred EEecCCHHHHHHHHHHhhccCCC-ccccCCCCCcccCCCcCCCc
Q 010554 355 WEDIGTIKSFYEANMALTKESPA-FHFYDPKTPFYTSPRFLPPT 397 (507)
Q Consensus 355 w~dIgt~~~y~~An~~ll~~~~~-~~~~~~~~~i~~~~~~~~p~ 397 (507)
+.-+.+|...+.....++.+.+. ...+++...+...+.+.+.+
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~ 138 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSA 138 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTC
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCC
Confidence 45567787766555556554332 22444544444443333333
No 66
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.83 E-value=1.1e-08 Score=95.17 Aligned_cols=91 Identities=13% Similarity=0.342 Sum_probs=53.3
Q ss_pred ceEEcCCcEEc-cceEeee----eE---EeeccCceE-------eeeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEE
Q 010554 406 DAIISHGCFLR-ECTVEHS----IV---DYYQTESEI-------ASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVI 470 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~S----ii---~~vg~~~~i-------~s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i 470 (507)
++.||++|.|+ ++.|..+ +| +.++.++.| .+.|+++ +.||.++.|.+++||++|.||.++.|
T Consensus 51 ~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~---~~Ig~~~~i~~~~Ig~~~~Ig~~~~I 127 (191)
T 3ixc_A 51 DVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKF---VTIGHSCILHACTLGNNAFVGMGSIV 127 (191)
T ss_dssp EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTT---CEECTTCEECSCEECTTCEECTTCEE
T ss_pred CcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCC---CEECCCCEEECCEECCCCEECCCCEE
Confidence 45667777666 4555432 33 245555555 3566777 77777777777777777777777777
Q ss_pred ecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 471 VNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 471 ~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
.+...+ .++..|..| ++|.++..|+++++
T Consensus 128 ~~~~~I------g~~~~Ig~g-svV~~~~~i~~~~~ 156 (191)
T 3ixc_A 128 MDRAVM------EEGSMLAAG-SLLTRGKIVKSGEL 156 (191)
T ss_dssp CTTCEE------CTTCEECTT-CEECTTCEECTTEE
T ss_pred eCCeEE------CCCCEECCC-CEECCCcCcCCCeE
Confidence 654332 233334444 44444455555543
No 67
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.82 E-value=2.1e-08 Score=98.35 Aligned_cols=61 Identities=10% Similarity=0.093 Sum_probs=26.0
Q ss_pred eeeCCCcEE-eeeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 445 IGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 445 ~~Ig~~~~I-~nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+.|+.+++| .+|.||+++.|+.++.+.....+++......+..|.+| +.||+++.|+.+++
T Consensus 115 ~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~-v~Ig~~a~Vg~~s~ 176 (266)
T 3r0s_A 115 AFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQF-VKVGEGCMIAGASA 176 (266)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTCEECSSCB
T ss_pred ceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCC-cEECCCCEEccCCe
Confidence 333344433 23444444444444444433333333333333334444 34455555554443
No 68
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.80 E-value=2e-08 Score=91.95 Aligned_cols=81 Identities=17% Similarity=0.350 Sum_probs=49.5
Q ss_pred cCCCceec-ceee-eceEEcCCcEEc-cceEee----eeE---EeeccCceEe------eeecCCCcceeeCCCcEEeee
Q 010554 393 FLPPTKID-NCRI-KDAIISHGCFLR-ECTVEH----SIV---DYYQTESEIA------SLLAEGKVPIGVGRNTKIRNC 456 (507)
Q Consensus 393 ~~~p~~i~-~~~I-~~siIg~gc~I~-~~~I~~----Sii---~~vg~~~~i~------s~l~~g~~~~~Ig~~~~I~ns 456 (507)
+.+.+.+. .+.| .++.||++|.|+ ++.|.. ++| ..++.++.|. +.++++ +.||.++.|.++
T Consensus 15 ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~---~~Ig~~~~i~~~ 91 (173)
T 1xhd_A 15 IASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDD---VTVGHQVILHSC 91 (173)
T ss_dssp ECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTT---CEECTTCEEESC
T ss_pred ECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCC---CEECCCCEEeCC
Confidence 33344444 2444 356777777776 556554 344 2455555553 566777 677777777777
Q ss_pred EeCCCCEECCCcEEecCCCC
Q 010554 457 IIDKNVKIGKDVVIVNKDDV 476 (507)
Q Consensus 457 IIg~na~Ig~~~~i~~~~~~ 476 (507)
+||++|.||.++.|.....+
T Consensus 92 ~Ig~~~~Ig~~~~i~~~~~I 111 (173)
T 1xhd_A 92 HIKKDALIGMGSIILDGAEI 111 (173)
T ss_dssp EECTTCEECTTCEECTTCEE
T ss_pred EECCCCEEcCCCEEcCCCEE
Confidence 77777777777777654433
No 69
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.80 E-value=2.8e-08 Score=97.38 Aligned_cols=16 Identities=0% Similarity=-0.014 Sum_probs=7.5
Q ss_pred eeecCCCcceeeCCCcEEe
Q 010554 436 SLLAEGKVPIGVGRNTKIR 454 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~ 454 (507)
..|+++ +.|+++++|.
T Consensus 86 ~~IG~~---~~Ig~~~~I~ 101 (265)
T 4e6u_A 86 LEIGNN---NLIREHCSLH 101 (265)
T ss_dssp EEECSS---CEECTTCEEE
T ss_pred EEECCC---eEECCceEEC
Confidence 344444 4455555553
No 70
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.80 E-value=2.9e-08 Score=97.64 Aligned_cols=14 Identities=14% Similarity=0.064 Sum_probs=6.7
Q ss_pred EEEcCCCEeCCCcc
Q 010554 493 TIIMEKATIEDGMV 506 (507)
Q Consensus 493 ~vig~~~~i~~gt~ 506 (507)
+.||+++.|+.+++
T Consensus 159 v~IG~~a~Ig~~s~ 172 (270)
T 1j2z_A 159 VRIAKGCMIAGKSA 172 (270)
T ss_dssp CEECTTCEECTTCE
T ss_pred cEeCCceEEecCcE
Confidence 34455555555443
No 71
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.78 E-value=2.9e-08 Score=96.99 Aligned_cols=46 Identities=7% Similarity=0.012 Sum_probs=17.6
Q ss_pred CCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCc
Q 010554 459 DKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGM 505 (507)
Q Consensus 459 g~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt 505 (507)
+.+++||+++.|.+...+....+++++..|..+ ++|.++++|++++
T Consensus 119 ~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~-a~V~~~v~Ig~~~ 164 (259)
T 3hsq_A 119 GHDCILGNNNILTHGAVLAGHVTLGNFAFISGL-VAVHQFCFVGDYS 164 (259)
T ss_dssp CTTCEECSSCEECTTCEECTTCEECSSCEECSS-EEECTTCEECTTC
T ss_pred CCCcEECCccEEcCCceECCccEECCCcEEeCC-CEECCCCEECCCC
Confidence 333333333333333333333333334444333 3334444444433
No 72
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.77 E-value=3.9e-08 Score=96.13 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=20.9
Q ss_pred eeecCCCcceeeCCCcEEee--------eEeCCCCEECCCcEEecCCCCc
Q 010554 436 SLLAEGKVPIGVGRNTKIRN--------CIIDKNVKIGKDVVIVNKDDVQ 477 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n--------sIIg~na~Ig~~~~i~~~~~~~ 477 (507)
..++++ +.|+++++|.. ++||+++.|+.++.|.+.+.++
T Consensus 84 ~~IG~~---~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig 130 (262)
T 2qia_A 84 VEIGDR---NRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVG 130 (262)
T ss_dssp EEECSS---CEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEEC
T ss_pred eEECCC---ceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEEC
Confidence 445555 56666666642 5566655555555554333333
No 73
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.77 E-value=1.7e-08 Score=94.94 Aligned_cols=50 Identities=8% Similarity=0.103 Sum_probs=26.8
Q ss_pred ceEEcCCcEEc-cceEeeeeEEeeccCceEeeeecCCCcceeeCCCcEE----eeeEeCCCCEECCCcEE
Q 010554 406 DAIISHGCFLR-ECTVEHSIVDYYQTESEIASLLAEGKVPIGVGRNTKI----RNCIIDKNVKIGKDVVI 470 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~Sii~~vg~~~~i~s~l~~g~~~~~Ig~~~~I----~nsIIg~na~Ig~~~~i 470 (507)
+..||++|.|+ +|.|...+ .|+++ |.|+.++.| .+++||++|.||++|.|
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v------------~IG~~---~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKV------------TIGSY---SHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp GEEECSSEEECTTCEEEEEE------------EECSS---EEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred eeEECCCCEECCCCEEccce------------EECCC---CEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 45667777666 45554222 23455 555555555 23555555555555555
No 74
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.76 E-value=1.1e-08 Score=107.57 Aligned_cols=113 Identities=24% Similarity=0.270 Sum_probs=66.6
Q ss_pred CCcCCCceec-ceeeeceEEcCCcEEc-cceEeeeeE---EeeccCceEe--eeecCCCcceeeCCCcEE----------
Q 010554 391 PRFLPPTKID-NCRIKDAIISHGCFLR-ECTVEHSIV---DYYQTESEIA--SLLAEGKVPIGVGRNTKI---------- 453 (507)
Q Consensus 391 ~~~~~p~~i~-~~~I~~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~--s~l~~g~~~~~Ig~~~~I---------- 453 (507)
..+.+.+.|+ ++.|.+++||++|.|+ +|.|.+++| ..+|.++.|. +.++++ +.||+++.|
T Consensus 284 ~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~---~~ig~~~~i~~~~i~~~~~ 360 (456)
T 2v0h_A 284 VKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAE---THVGNFVEIKKSTVGKGSK 360 (456)
T ss_dssp EEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTT---CEEEEEEEEESCEECTTCE
T ss_pred cEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCC---CEECCCCEEeccEECCCCE
Confidence 3344455554 4777788888888887 677777766 2445555442 444444 444444433
Q ss_pred -------eeeEeCCCCEECCCcEEecCC-------CCccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 454 -------RNCIIDKNVKIGKDVVIVNKD-------DVQEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 454 -------~nsIIg~na~Ig~~~~i~~~~-------~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
.++.||+||.||.+++|.+.+ .+++...+..+..|.+| +.||++++|++|+++
T Consensus 361 i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~-v~Ig~~~~ig~~s~v 427 (456)
T 2v0h_A 361 VNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAP-VKVANGATIGAGTTI 427 (456)
T ss_dssp EEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEES-EEECTTCEECTTCEE
T ss_pred eccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCC-cEECCCCEECCCCEE
Confidence 335778888888888877632 33444444444444444 556777777776653
No 75
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.74 E-value=3.3e-08 Score=90.51 Aligned_cols=91 Identities=18% Similarity=0.288 Sum_probs=56.0
Q ss_pred ceEEcCCcEEc-cceEee----eeE---EeeccCceEe------eeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEe
Q 010554 406 DAIISHGCFLR-ECTVEH----SIV---DYYQTESEIA------SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~----Sii---~~vg~~~~i~------s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~ 471 (507)
++.||++|.|+ ++.|.. ++| ..++.++.|. +.++++ +.|++++.|.+++||+++.||.++.|.
T Consensus 28 ~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~---~~I~~~~~i~~~~Ig~~~~Ig~~~~i~ 104 (173)
T 1v3w_A 28 DVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEY---VTIGHNAMVHGAKVGNYVIIGISSVIL 104 (173)
T ss_dssp EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSS---CEECTTCEEESCEECSSEEECTTCEEC
T ss_pred CEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCC---CEECCCCEECCCEECCCCEECCCCEEe
Confidence 45556666665 444443 333 2455666653 667888 788888999889999999999888887
Q ss_pred cCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 472 NKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 472 ~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+...+++. ..|..| ++|.++..|+++++
T Consensus 105 ~~~~Ig~~------~~Ig~~-s~V~~~~~i~~~~~ 132 (173)
T 1v3w_A 105 DGAKIGDH------VIIGAG-AVVPPNKEIPDYSL 132 (173)
T ss_dssp TTCEECSS------EEECTT-CEECTTCEECTTEE
T ss_pred CCCEECCC------CEECCC-CEECCCcEeCCCcE
Confidence 75444433 334334 33444444444443
No 76
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.74 E-value=4.6e-08 Score=92.61 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=43.4
Q ss_pred eeecCCCcceeeCCCcEEee-eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 436 SLLAEGKVPIGVGRNTKIRN-CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n-sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
+.|+++ +.|+.++.|.. ++||++|.||.+++|.+ ..+++...+..+..+ .+ ++|++++.|++|+++
T Consensus 112 ~~IG~~---v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Igags~V-~~-~~i~~~~~v~~~~vv 178 (213)
T 3kwd_A 112 VWIGDN---VSITHMALIHGPAYIGDGCFIGFRSTVFN-ARVGAGCVVMMHVLI-QD-VEIPPGKYVPSGMVI 178 (213)
T ss_dssp EEECTT---CEECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECSSCEE-ES-CEECTTBEECTTCEE
T ss_pred eEECCC---cEECCCcEEcCCCEECCCCEECCCCEEeC-cEECCCCEEcCCCEE-CC-cEeCCCCEECCCcEE
Confidence 456666 67777777776 77777777777777765 445555544444444 23 456778888877764
No 77
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.74 E-value=3.5e-08 Score=96.89 Aligned_cols=59 Identities=22% Similarity=0.304 Sum_probs=29.5
Q ss_pred eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCC
Q 010554 436 SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEK 498 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~ 498 (507)
+.++++ +.||.++.|+ +|.|++++.|+.++.|.+...+++......+..|..+ ++|+++
T Consensus 89 ~~Ig~~---~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~-~~ig~~ 148 (273)
T 3fs8_A 89 TIIGDN---FQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEK-SIIKDF 148 (273)
T ss_dssp CEECTT---CEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTT-CEECTT
T ss_pred CEECCC---CEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCC-ceeCCc
Confidence 445555 4555555553 5666666666555555544444444444444444333 344443
No 78
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.72 E-value=4.7e-08 Score=96.78 Aligned_cols=67 Identities=7% Similarity=0.053 Sum_probs=43.6
Q ss_pred eeecCCCcceeeCCCcEE-eeeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 436 SLLAEGKVPIGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I-~nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+.++++ +.|+.+++| .+|+||+++.|+.++.+.....+++......+..|.+| +.||+++.|+.+++
T Consensus 126 ~~IG~~---~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~-v~Ig~~~vvg~~s~ 193 (283)
T 4eqy_A 126 TTLGDD---NWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQY-VRIGAHSMLGGASA 193 (283)
T ss_dssp EEECSS---CEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTCEECTTCE
T ss_pred eEECCC---cEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCC-eEECCCcEECCCCe
Confidence 455555 566666666 56777777777777777666666666655566666666 55677777766664
No 79
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.71 E-value=3.8e-08 Score=91.02 Aligned_cols=61 Identities=20% Similarity=0.485 Sum_probs=39.3
Q ss_pred eeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 436 SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+.++++ +.||.++.|.+++||++|.||.++.|.....+ .++..|..| ++|.++..|+++++
T Consensus 84 ~~Ig~~---~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~I------g~~~~Ig~~-s~V~~~~~i~~~~v 144 (187)
T 3r3r_A 84 LIIGED---VTVGHKVMLHGCTIGNRVLVGMGSIVLDGAII------EDDVMIGAG-SLVPQHKRLESGYL 144 (187)
T ss_dssp EEECSS---CEECTTCEEESCEECSSEEECTTCEECTTCEE------CSSEEECTT-CEECTTCEECTTEE
T ss_pred eEECCC---CEECCCCEEeCcEECCCCEECCCCEECCCCEE------CCCCEECCC-CEECCCcCcCCCcE
Confidence 667777 78888888888888888888888888654332 233344444 44444445555543
No 80
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.71 E-value=2.3e-08 Score=105.73 Aligned_cols=67 Identities=28% Similarity=0.341 Sum_probs=52.4
Q ss_pred eeee-ceEEcCCcEEc-cceEeeeeE---EeeccCceEe-eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEec
Q 010554 402 CRIK-DAIISHGCFLR-ECTVEHSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 402 ~~I~-~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~~ 472 (507)
+.|. ++.||++|+|+ ++.|.+++| +.++ ++.+. +.++++ +.||++++|+ +|+||++++||+++.|.+
T Consensus 287 ~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~---~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~ 360 (468)
T 1hm9_A 287 VILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADG---VTVGPYAHIRPNSSLGAQVHIGNFVEVKG 360 (468)
T ss_dssp CEEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTT---CEECSSCEECSSCEECTTCEEEEEEEEES
T ss_pred cEECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCC---cEECCceEEecCcEECCccEECCCcEEee
Confidence 4443 67888888887 678888777 3566 66674 888888 8899999998 899999988888777654
No 81
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.70 E-value=7e-08 Score=94.74 Aligned_cols=49 Identities=16% Similarity=0.295 Sum_probs=30.0
Q ss_pred eeccCceEe--eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEecCCCCcc
Q 010554 427 YYQTESEIA--SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQE 478 (507)
Q Consensus 427 ~vg~~~~i~--s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~~~~~~~e 478 (507)
.+|..+.|. +.++++ +.|+.++.|. +++||+++.|+.++.|...+.+++
T Consensus 96 ~Ig~~~~I~~~~~Ig~~---~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~ 147 (273)
T 3fs8_A 96 QTGHKVTIRENTKIGNN---VKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKD 147 (273)
T ss_dssp EECSSCEECSSCEECSS---CEECTTCEECSSCEECSSCEECTTCEECTTCEECT
T ss_pred EECCceEECCCCEECCC---CEECccceeCCceEECCceEECCCCEECCCceeCC
Confidence 344555552 556666 5666666664 677777777777777765554444
No 82
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.70 E-value=6.9e-08 Score=94.54 Aligned_cols=97 Identities=11% Similarity=0.040 Sum_probs=61.2
Q ss_pred ceEEcCCcEEc-cceE-------------eeeeE---EeeccCceEe---------eeecCCCcceeeCCCcEE-eeeEe
Q 010554 406 DAIISHGCFLR-ECTV-------------EHSIV---DYYQTESEIA---------SLLAEGKVPIGVGRNTKI-RNCII 458 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I-------------~~Sii---~~vg~~~~i~---------s~l~~g~~~~~Ig~~~~I-~nsII 458 (507)
++.||++|.|. ++.| .+++| ..++.++.|. +.++++ +.|+.+++| .+|+|
T Consensus 55 ~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~---~~I~~~~~I~~~~~I 131 (265)
T 4e6u_A 55 FTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSH---NLLMVNTHIAHDCIV 131 (265)
T ss_dssp SEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSS---CEECTTCEECTTCEE
T ss_pred CcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceEEccC---cEEeeeeEEcccEEE
Confidence 35666666665 4555 24444 2455566553 556666 666777777 56777
Q ss_pred CCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 459 DKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 459 g~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
|+++.|+.++.|.....+++......+..|.+| +.||+++.|++|++
T Consensus 132 g~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~-v~Ig~~~~i~~~sv 178 (265)
T 4e6u_A 132 GDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQF-CKIDSYSMIGGASL 178 (265)
T ss_dssp CSSCEECTTCEECTTCEECSSCEECTTCEECTT-CEECTTCEECTTCE
T ss_pred CCCcEEcCCcEECCCcEECCCeEEcCCCEECCC-cEECCCCEEcCCCE
Confidence 777777777777766666666655666666666 56677777776665
No 83
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.70 E-value=1.8e-06 Score=91.19 Aligned_cols=260 Identities=10% Similarity=0.103 Sum_probs=143.5
Q ss_pred CCCCCceEEEEEcCCCCCcccCCccCCCccceeec-CcchhhHHHHHHHHhc----CCC-EEEEEecc-CchHHHHHHHh
Q 010554 89 RVDPKNVAAIILGGGAGTKLFPLTLRAATPAVPVA-GCYRLIDIPMSNCINS----GIN-KIFVLTQF-NSASLNRHIAR 161 (507)
Q Consensus 89 ~~~~~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~-g~ypLId~~L~~l~~~----Gi~-~I~Vv~~~-~~~~l~~~l~~ 161 (507)
+....++.+|+||||.||||. ...||.++||. |+ +++++.++.+... |.. ..+|.+++ ..+...+++.+
T Consensus 122 ~~~l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k 197 (528)
T 3r3i_A 122 SSVLNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQK 197 (528)
T ss_dssp CTTCTTEEEEEECCCBCTTTT---CSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGG
T ss_pred hhhcCceEEEEeCCCCccccC---CCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHh
Confidence 345678999999999999996 57899999997 77 9999999998765 422 34666654 45666666643
Q ss_pred cc-cCCCcc-cCCCeEEEecC-ccCCC--------CCCC-CcccChHHHHHHH--HHHHHhhhcCCCCeEEEEcCceec-
Q 010554 162 TY-FGNGTN-FGDGFVEVLAA-TQTPG--------ESGK-NWFQGTADAVRQF--TWVFEDAKNRNIENVAILCGDHLY- 226 (507)
Q Consensus 162 ~~-~~~~~~-~~~~~V~vl~~-~q~~~--------~~~~-~~~~Gta~AL~~~--~~~l~~~~~~~~~~~lVl~gD~i~- 226 (507)
.. |+.... |.+..+-.+.. ..-+- .... -.|-|.||-.+.. ...+++....+.+.+.+.+.|.+.
T Consensus 198 ~~~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga 277 (528)
T 3r3i_A 198 YNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGA 277 (528)
T ss_dssp GTTSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTC
T ss_pred cCccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCccc
Confidence 21 321100 11110000000 00000 0001 1245777644432 223444444678999999999965
Q ss_pred cCCHHHHHHHHHHc----CCceEEEEEEcCCCCCccceEEEECCCCc--EEEEEeCCCccccccccccccccCCCccccc
Q 010554 227 RMDYMDFIQSHVDR----DADITISCAAVGESRASDYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEAR 300 (507)
Q Consensus 227 ~~dl~~ll~~h~~~----~a~~tl~~~~~~~~~~~~~g~v~id~~gr--V~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~ 300 (507)
..|. .++..+..+ ++++.+-+.+...+. ..-|++.. .+|+ ++++.|-|+..... .+. .
T Consensus 278 ~vDp-~~Lg~~~~~~~~~~~d~~~kVv~Kt~~d-ek~Gvl~~-~dGk~~vvEyseip~e~~~~----~~g---------~ 341 (528)
T 3r3i_A 278 TVDL-YILNHLMNPPNGKRCEFVMEVTNKTRAD-VKGGTLTQ-YEGKLRLVEIAQVPKAHVDE----FKS---------V 341 (528)
T ss_dssp CCCH-HHHHHHSSCSSSCCCSEEEEECCCCTTC-CSSCEEEC-SSSSCEEECTTSSCGGGTTT----SSC---------S
T ss_pred ccCH-HHHHHHHhcccccCCcEEEEEeEccccC-CcccEEEE-ECCeEEEEEecCCChhHhhc----cCC---------c
Confidence 4554 466777776 788776655433221 23455543 3454 44554444322110 000 0
Q ss_pred cCCceeeeEEEEEeHHHHHHHHHhhCCCC------------------CchhhhhHHhhhhcCcEEEEEec-cEEEecCCH
Q 010554 301 KCPYVASMGVYVFKKDVLFKLLRWRYPTS------------------NDFGSEIIPAAIMEHDVQAYIFR-DYWEDIGTI 361 (507)
Q Consensus 301 ~~~~l~~~Giyif~~~iL~~ll~~~~~~~------------------~d~~~dil~~li~~~~V~~~~~~-gyw~dIgt~ 361 (507)
....+.|+....|+-+.|.++++...... +.+..++++.. .+..++.+. ..+.-+-+.
T Consensus 342 ~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f---~~~~~i~VpR~rF~PvKn~ 418 (528)
T 3r3i_A 342 SKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF---ENSLGINVPRSRFLPVKTT 418 (528)
T ss_dssp SSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS---SSCCCEECCGGGCCBCCSH
T ss_pred ccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc---cCcEEEEEehHHcccccch
Confidence 12246899999999999999887531110 00111112111 223334443 237778888
Q ss_pred HHHHHHHHHh
Q 010554 362 KSFYEANMAL 371 (507)
Q Consensus 362 ~~y~~An~~l 371 (507)
.|++...-++
T Consensus 419 sdLll~~Sdl 428 (528)
T 3r3i_A 419 SDLLLVMSNL 428 (528)
T ss_dssp HHHHHHHSTT
T ss_pred HHHHHHhcce
Confidence 9988776554
No 84
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.69 E-value=1.3e-08 Score=106.35 Aligned_cols=54 Identities=24% Similarity=0.506 Sum_probs=41.9
Q ss_pred CceE-eeeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 431 ESEI-ASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 431 ~~~i-~s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
++.| +++|+++ |.||+||.|.+|+|+++|.||.|+.|.+ ++||++++|++|++|
T Consensus 335 ~~~i~~~~ig~~---~~I~~~~~i~~~~i~~~~~i~~~~~i~~--------------------~~ig~~~~i~~~~~i 389 (420)
T 3brk_X 335 GAALNRSLLFTG---VRANSYSRLENAVVLPSVKIGRHAQLSN--------------------VVIDHGVVIPEGLIV 389 (420)
T ss_dssp SCEEESCEECTT---CEECTTCEEEEEEECTTCEECTTCEEEE--------------------EEECTTCEECTTCEE
T ss_pred CCEEeCcEEcCC---CEECCCCEEcceEEcCCCEECCCCEEec--------------------eEECCCCEECCCCEE
Confidence 3444 3888998 8899999999999999999999999976 556666666666553
No 85
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.69 E-value=8.4e-08 Score=94.09 Aligned_cols=66 Identities=8% Similarity=-0.065 Sum_probs=34.5
Q ss_pred eeecCCCcceeeCCCcEEee--------eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCc
Q 010554 436 SLLAEGKVPIGVGRNTKIRN--------CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGM 505 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n--------sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt 505 (507)
..|+++ +.|+++++|.. ++||+++.|+.++.|.+.+.+++......+..+.++ ++||+++.|+.++
T Consensus 84 v~IG~~---~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~-v~Igd~~~Ig~~a 157 (266)
T 3r0s_A 84 VVIGKN---ATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGH-VELGDFTVVGGLT 157 (266)
T ss_dssp EEECTT---CEECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTT-CEECTTCEECTTC
T ss_pred EEECCC---CEECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCC-eEECCCcEEccCC
Confidence 555666 66677766653 666666666666655544444444444444444333 3344444444433
No 86
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.68 E-value=5.2e-08 Score=90.22 Aligned_cols=91 Identities=18% Similarity=0.365 Sum_probs=57.1
Q ss_pred ceEEcCCcEEc-cceEee----eeE---EeeccCceEe-e------------eecCCCcceeeCCCcEEeeeEeCCCCEE
Q 010554 406 DAIISHGCFLR-ECTVEH----SIV---DYYQTESEIA-S------------LLAEGKVPIGVGRNTKIRNCIIDKNVKI 464 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~----Sii---~~vg~~~~i~-s------------~l~~g~~~~~Ig~~~~I~nsIIg~na~I 464 (507)
++.||++|.|+ ++.|.. ..| +.++.++.|. + .++++ +.||.++.|.+++||++|.|
T Consensus 37 ~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~---~~Ig~~~~i~~~~Ig~~~~I 113 (189)
T 3r1w_A 37 DVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDD---VTIGHQAMLHGCTIGNRVLI 113 (189)
T ss_dssp EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSS---EEECTTCEEESCEECSSEEE
T ss_pred eeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCC---CEECCCCEEeCcEECCCcEE
Confidence 45566666665 455532 133 2455666553 2 77888 88999999999999999999
Q ss_pred CCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 465 GKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 465 g~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
|.++.|.....++ ++..|..| ++|.++..|+++++
T Consensus 114 g~~~~i~~~v~Ig------~~~~Ig~~-s~V~~g~~i~~~~v 148 (189)
T 3r1w_A 114 GMKSMIMDGAIVE------DEVIVAAG-ATVSPGKVLESGFV 148 (189)
T ss_dssp CTTCEECTTCEEC------SSCEECTT-CEECTTCEECTTEE
T ss_pred CCCCEEcCCCEEC------CCCEEccC-CEECCCCEeCCCCE
Confidence 9998887644333 33444444 44555555555554
No 87
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.68 E-value=9.7e-08 Score=95.55 Aligned_cols=13 Identities=38% Similarity=0.189 Sum_probs=6.1
Q ss_pred EEcCCCEeCCCcc
Q 010554 494 IIMEKATIEDGMV 506 (507)
Q Consensus 494 vig~~~~i~~gt~ 506 (507)
.||+++.|++|++
T Consensus 188 ~IG~~a~ig~gs~ 200 (305)
T 3t57_A 188 HIGSFAFIGGGSV 200 (305)
T ss_dssp EECTTCEECTTCE
T ss_pred EECCCCEEcCCCe
Confidence 3444444444443
No 88
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.67 E-value=8.2e-08 Score=89.21 Aligned_cols=14 Identities=29% Similarity=0.247 Sum_probs=7.6
Q ss_pred EEEcCCCEeCCCcc
Q 010554 493 TIIMEKATIEDGMV 506 (507)
Q Consensus 493 ~vig~~~~i~~gt~ 506 (507)
++||++++|++|++
T Consensus 121 ~~Ig~~~~Igagsv 134 (192)
T 3mqg_A 121 ATIGRYAFVGAGAV 134 (192)
T ss_dssp CEECTTCEECTTCE
T ss_pred CEECCCCEEcCCCE
Confidence 44555555555554
No 89
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=98.67 E-value=4.3e-08 Score=94.61 Aligned_cols=84 Identities=18% Similarity=0.307 Sum_probs=45.2
Q ss_pred cccCCCCCcccCCCcCCCceec-ceee-eceEEcCCcEEc-cceEeeeeEEeeccCceE--eeeecCCCcceeeCCCcEE
Q 010554 379 HFYDPKTPFYTSPRFLPPTKID-NCRI-KDAIISHGCFLR-ECTVEHSIVDYYQTESEI--ASLLAEGKVPIGVGRNTKI 453 (507)
Q Consensus 379 ~~~~~~~~i~~~~~~~~p~~i~-~~~I-~~siIg~gc~I~-~~~I~~Sii~~vg~~~~i--~s~l~~g~~~~~Ig~~~~I 453 (507)
.+..+...+...+.+.++++|+ +|.| .+++|+.+|.|+ +|.|. .++.| .+.++++ |.||+++.|
T Consensus 86 ~~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~--------~~~~I~~~~~IG~~---~~I~~~~~i 154 (240)
T 3r8y_A 86 DLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMID--------MNAVLGGRATVGKN---CHVGAGAVL 154 (240)
T ss_dssp CCTTCSSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEEC--------TTCEECTTCEECTT---CEECTTCEE
T ss_pred hccCCCCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEEC--------CCCEECCCCEECCC---cEECCCcEE
Confidence 3334445555555555555554 3444 234444444443 23332 12222 1445677 677777777
Q ss_pred ee---------eEeCCCCEECCCcEEecC
Q 010554 454 RN---------CIIDKNVKIGKDVVIVNK 473 (507)
Q Consensus 454 ~n---------sIIg~na~Ig~~~~i~~~ 473 (507)
.+ ++||++|.||.+++|...
T Consensus 155 ~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~ 183 (240)
T 3r8y_A 155 AGVIEPPSAKPVIVEDDVVIGANVVVLEG 183 (240)
T ss_dssp CCCCSCTTSCCCEECTTCEECTTCEECTT
T ss_pred CCCccCCCCCCcEECCCCEECCCCEECCC
Confidence 66 777777777777777543
No 90
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.66 E-value=7.1e-08 Score=88.23 Aligned_cols=15 Identities=27% Similarity=0.589 Sum_probs=7.1
Q ss_pred eEEcCCcEEc-cceEe
Q 010554 407 AIISHGCFLR-ECTVE 421 (507)
Q Consensus 407 siIg~gc~I~-~~~I~ 421 (507)
+.||++|.|+ +|.|.
T Consensus 52 v~IG~~~~I~~~~~I~ 67 (173)
T 1xhd_A 52 TIIGDRVNVQDQCTLH 67 (173)
T ss_dssp EEECTTCEECTTCEEE
T ss_pred EEECCCCEECCCCEEE
Confidence 4455555554 34444
No 91
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.65 E-value=1.1e-07 Score=93.55 Aligned_cols=24 Identities=21% Similarity=0.014 Sum_probs=11.4
Q ss_pred CCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 482 PELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 482 ~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
++++..|..+ ++|.++++|+++++
T Consensus 143 Igd~~~Ig~~-a~V~~~v~IG~~a~ 166 (270)
T 1j2z_A 143 IGDYVNIGGL-TAIHQFVRIAKGCM 166 (270)
T ss_dssp ECSSCEECTT-CEECTTCEECTTCE
T ss_pred ECCCeEEecC-CEECCCcEeCCceE
Confidence 3334444333 44455555555554
No 92
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.65 E-value=1.2e-07 Score=95.71 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=46.5
Q ss_pred CCcCCCceec-ceeeeceEEcCCcEEc-cceEeeeeE---Ee----------------------------eccCceEe-e
Q 010554 391 PRFLPPTKID-NCRIKDAIISHGCFLR-ECTVEHSIV---DY----------------------------YQTESEIA-S 436 (507)
Q Consensus 391 ~~~~~p~~i~-~~~I~~siIg~gc~I~-~~~I~~Sii---~~----------------------------vg~~~~i~-s 436 (507)
+.+.+.+.|+ +|.|.+|+|+++|.|+ ++.|++|+| .. ++.+++|. +
T Consensus 84 ~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s 163 (334)
T 2pig_A 84 CTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHS 163 (334)
T ss_dssp CEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESC
T ss_pred eeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEecc
Confidence 3333444444 4777788888888888 678888876 12 33333442 4
Q ss_pred eecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEec
Q 010554 437 LLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~ 472 (507)
++.++ |.|+.+++|.+|+|+.++.|++++.+..
T Consensus 164 ~I~~g---~~I~~~a~I~~svI~~~a~I~~~a~V~~ 196 (334)
T 2pig_A 164 RIVHQ---VQLYGNATITHAFIEHRAEVFDFALIEG 196 (334)
T ss_dssp EEETT---CEECTTCEEESEEECTTCEECTTCEEEC
T ss_pred EEcCC---CEEcCCeEEeCcEEcCCCEECCCcEECC
Confidence 55555 5555555555555555555555555543
No 93
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.64 E-value=2.1e-08 Score=100.70 Aligned_cols=22 Identities=14% Similarity=0.077 Sum_probs=10.6
Q ss_pred hhhhHHhhhhc-CcEEEEEeccEE
Q 010554 333 GSEIIPAAIME-HDVQAYIFRDYW 355 (507)
Q Consensus 333 ~~dil~~li~~-~~V~~~~~~gyw 355 (507)
+.++|..+-+. .++..+ .++-|
T Consensus 73 ~~~~~~~l~~~~~rva~~-~~~~~ 95 (316)
T 3tk8_A 73 VAHAIEQLDRGALRVAEK-IDGAW 95 (316)
T ss_dssp HHHHHHHHHTTSSCSEEE-ETTEE
T ss_pred HHHHHHHHHhCCCEEeee-ccchH
Confidence 34555433332 566666 34444
No 94
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.63 E-value=7.9e-08 Score=89.45 Aligned_cols=75 Identities=16% Similarity=0.267 Sum_probs=51.0
Q ss_pred eccCceEe-----eeecCCCcceeeCCCcEEe------eeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEc
Q 010554 428 YQTESEIA-----SLLAEGKVPIGVGRNTKIR------NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIM 496 (507)
Q Consensus 428 vg~~~~i~-----s~l~~g~~~~~Ig~~~~I~------nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig 496 (507)
++.++.|. ..|+++ +.|++++.|. +++||+++.||.++.|.+ ..+++......+..|.+| ++||
T Consensus 60 I~~~~~I~~~~~~i~IG~~---~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~-~~Ig 134 (191)
T 3ixc_A 60 IWYGTVLRGDVDKIEVGEG---TNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHA-CTLGNNAFVGMGSIVMDR-AVME 134 (191)
T ss_dssp ECTTCEEEEEEEEEEECTT---CEECTTCEECC----CCEEECTTCEECTTCEECS-CEECTTCEECTTCEECTT-CEEC
T ss_pred ECCCCEEecCCCCeEECCC---CEECCCCEEeecCCcCCeEECCCCEECCCCEEEC-CEECCCCEECCCCEEeCC-eEEC
Confidence 35555553 267777 7788888887 788888888888887765 456666666666666666 5667
Q ss_pred CCCEeCCCccC
Q 010554 497 EKATIEDGMVI 507 (507)
Q Consensus 497 ~~~~i~~gt~i 507 (507)
+++.|++|++|
T Consensus 135 ~~~~Ig~gsvV 145 (191)
T 3ixc_A 135 EGSMLAAGSLL 145 (191)
T ss_dssp TTCEECTTCEE
T ss_pred CCCEECCCCEE
Confidence 77777666653
No 95
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.63 E-value=3.5e-08 Score=97.39 Aligned_cols=18 Identities=28% Similarity=0.438 Sum_probs=9.2
Q ss_pred eEeCCCCEECCCcEEecC
Q 010554 456 CIIDKNVKIGKDVVIVNK 473 (507)
Q Consensus 456 sIIg~na~Ig~~~~i~~~ 473 (507)
++||+||.||.+++|..+
T Consensus 178 v~IGd~v~IG~~a~I~~g 195 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEG 195 (276)
T ss_dssp CEECTTCEECTTCEECTT
T ss_pred eEECCCCEECCCCEECCC
Confidence 445555555555555443
No 96
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.61 E-value=8.8e-08 Score=101.56 Aligned_cols=226 Identities=10% Similarity=0.045 Sum_probs=130.5
Q ss_pred cChHHHHHHHHHHHHhhhcCCCCeEEEEc----CceeccCCHHHHHHHHHHc--C---------CceEEEEEEcCCCCCc
Q 010554 193 QGTADAVRQFTWVFEDAKNRNIENVAILC----GDHLYRMDYMDFIQSHVDR--D---------ADITISCAAVGESRAS 257 (507)
Q Consensus 193 ~Gta~AL~~~~~~l~~~~~~~~~~~lVl~----gD~i~~~dl~~ll~~h~~~--~---------a~~tl~~~~~~~~~~~ 257 (507)
++++.+++.+.+.+ .+++|++ +|....+++.+++..|+++ + +..|+.+..+.+.-.+
T Consensus 124 L~~a~~i~~~d~~~--------~~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~L~~l~d~li~ 195 (496)
T 3c8v_A 124 LHDDEVITIKDSFL--------NKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVR 195 (496)
T ss_dssp CSSCCEEEEESCEE--------ESCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEESCEEESCEEC
T ss_pred hhHhhhHHhhhhcC--------CceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceeeHHHHHHHHHH
Confidence 57777765432110 1237777 5777777766666777752 2 2344544445443224
Q ss_pred cceEEEECCCCcEEEEEeCCCccccccccccccccCCCccccccCCceeeeEEEEEeHHHHHHHHHhhCCCCCchhhhhH
Q 010554 258 DYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDFGSEII 337 (507)
Q Consensus 258 ~~g~v~id~~grV~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~~~~~~~d~~~dil 337 (507)
.|+.+. .|++..+.++|...-. .++.....+|.|.++.|..++.+.... .
T Consensus 196 ~~~~~~---~g~i~~~~~~pg~~~i-------------------~~~~~lnf~Y~f~~~~L~~~l~~~~~~-n------- 245 (496)
T 3c8v_A 196 YFSYVQ---TGELVGKCVEPGQIWI-------------------KSGDELEFHYSFDKAILDKYISQEAGS-C------- 245 (496)
T ss_dssp TTCEEE---SSEEESCEECTTEEEE-------------------ECTTSEEEEEECCHHHHTTTCBCCTTS-C-------
T ss_pred HHhhhc---CCceEEeeecCCceec-------------------ccccccceEEEcCHHHHHHHHhhccCc-c-------
Confidence 566652 4667776666652100 012234569999998876543221110 0
Q ss_pred HhhhhcCcEEEEEeccEEEec--CCHHHHHHHHHHhhcc-C---CCccccCCCCCcccCCCcCCCceec-ceeeeceEEc
Q 010554 338 PAAIMEHDVQAYIFRDYWEDI--GTIKSFYEANMALTKE-S---PAFHFYDPKTPFYTSPRFLPPTKID-NCRIKDAIIS 410 (507)
Q Consensus 338 ~~li~~~~V~~~~~~gyw~dI--gt~~~y~~An~~ll~~-~---~~~~~~~~~~~i~~~~~~~~p~~i~-~~~I~~siIg 410 (507)
..++|.|+ ..++++.++....... . ..-.++++...+.....+.+.+.|. +|.|.+++||
T Consensus 246 -------------~~g~~~Dll~~~~~d~~~i~~~~~~~~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG 312 (496)
T 3c8v_A 246 -------------PTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMG 312 (496)
T ss_dssp -------------CBSHHHHHHHTTTHHHHHHHHC--------CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEEC
T ss_pred -------------ccceeeehhccchHHHHHHhhccccccCcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEec
Confidence 01222222 2334444432211100 0 1112334444333344555566665 4777889999
Q ss_pred CCcEEc-cceEeeeeEE---eeccCceEe-eeecCCCcceeeCCCcEEeee-----EeCCCCEECCCcEEec
Q 010554 411 HGCFLR-ECTVEHSIVD---YYQTESEIA-SLLAEGKVPIGVGRNTKIRNC-----IIDKNVKIGKDVVIVN 472 (507)
Q Consensus 411 ~gc~I~-~~~I~~Sii~---~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~ns-----IIg~na~Ig~~~~i~~ 472 (507)
++|.|+ +|.|.+|+|+ .+|.++.+. +.|+++ |.||.+|.|..+ +||++|.||.++++..
T Consensus 313 ~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~---v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~~ 381 (496)
T 3c8v_A 313 KGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDM---IFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDL 381 (496)
T ss_dssp TTCEECTTCEEEEEEEEESCEECTTCEEESEEEEET---CEECTTCEEECCSSSCEEECTTCEECTTCEEEC
T ss_pred CCCEECCCceEeceEeCCCCEECCCcEEcCceECCC---cEECCCCEEeCCCCcceEECCCCEECCCCEEec
Confidence 999998 7899999883 678888885 889998 889999999876 7888888888887763
No 97
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.59 E-value=2.8e-07 Score=87.53 Aligned_cols=19 Identities=11% Similarity=0.043 Sum_probs=11.0
Q ss_pred EEecCCHHHHHHHHHHhhc
Q 010554 355 WEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 355 w~dIgt~~~y~~An~~ll~ 373 (507)
+.-|++++...+....+.+
T Consensus 75 ~iAIg~~~~R~~i~~~l~~ 93 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARD 93 (220)
T ss_dssp EECCCCHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHh
Confidence 3446776666555555554
No 98
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.58 E-value=1.4e-07 Score=87.24 Aligned_cols=41 Identities=10% Similarity=0.259 Sum_probs=17.5
Q ss_pred eccCceEe-eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEe
Q 010554 428 YQTESEIA-SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 428 vg~~~~i~-s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~ 471 (507)
++.++.|. +.|+++ |.||.++.|. ++.||++|.||.++++.
T Consensus 96 Ig~~~~i~~~~Ig~~---~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~ 138 (189)
T 3r1w_A 96 IGHQAMLHGCTIGNR---VLIGMKSMIMDGAIVEDEVIVAAGATVS 138 (189)
T ss_dssp ECTTCEEESCEECSS---EEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred ECCCCEEeCcEECCC---cEECCCCEEcCCCEECCCCEEccCCEEC
Confidence 34444442 444444 4444444442 34444444444444443
No 99
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.58 E-value=2.3e-07 Score=90.53 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=34.4
Q ss_pred eeeCCCcEE-eeeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 445 IGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 445 ~~Ig~~~~I-~nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+.|+.+++| .+|.||+++.|+.++.+.....+++......+..|.+| +.||+++.|++|++
T Consensus 115 ~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~-v~Ig~~~~ig~~s~ 176 (262)
T 2qia_A 115 NLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQF-CIIGAHVMVGGCSG 176 (262)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTCEECSSCE
T ss_pred cEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCC-CEECCCCEEccCCE
Confidence 445555555 35666666666666655554444554444455555555 55666666666664
No 100
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.58 E-value=1.3e-07 Score=91.90 Aligned_cols=67 Identities=16% Similarity=0.257 Sum_probs=47.2
Q ss_pred eecCCCcceeeCCCcEEe----eeEeCCCCEECCCcEEecCC-------------------CCccCCCCCCCeEEcCCeE
Q 010554 437 LLAEGKVPIGVGRNTKIR----NCIIDKNVKIGKDVVIVNKD-------------------DVQEADRPELGFYIRSGIT 493 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I~----nsIIg~na~Ig~~~~i~~~~-------------------~~~e~~~~~~~~~i~~g~~ 493 (507)
.|+++ +.||.+++|. ++.||++|.||++|+|.+++ .+++...++.+..|..| +
T Consensus 107 ~IG~~---~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~g-v 182 (252)
T 3jqy_B 107 IIGRR---TTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKG-V 182 (252)
T ss_dssp EECTT---CEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTT-C
T ss_pred EECCC---CEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCC-C
Confidence 45777 7788888887 78888888888888888763 34555555555555556 5
Q ss_pred EEcCCCEeCCCccC
Q 010554 494 IIMEKATIEDGMVI 507 (507)
Q Consensus 494 vig~~~~i~~gt~i 507 (507)
+||++++|++|++|
T Consensus 183 ~IG~~~~IgagsvV 196 (252)
T 3jqy_B 183 SVGSGSVIGYGSIV 196 (252)
T ss_dssp EECTTCEECTTCEE
T ss_pred EECCCCEECCCCEE
Confidence 66777777777654
No 101
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.56 E-value=3.3e-07 Score=89.44 Aligned_cols=51 Identities=8% Similarity=0.046 Sum_probs=26.2
Q ss_pred eeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 455 NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 455 nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+|.||+++.|+.++.+.+...+++......+..|.+| +.||+++.|++|++
T Consensus 121 ~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~-v~Ig~~~~Vg~~s~ 171 (259)
T 3hsq_A 121 DCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQF-CFVGDYSMVAGLAK 171 (259)
T ss_dssp TCEECSSCEECTTCEECTTCEECSSCEECSSEEECTT-CEECTTCEECSSEE
T ss_pred CcEECCccEEcCCceECCccEECCCcEEeCCCEECCC-CEECCCCEECCCCE
Confidence 3555555555555555444444444445555555555 44555555555543
No 102
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.56 E-value=2.5e-07 Score=86.18 Aligned_cols=61 Identities=10% Similarity=-0.017 Sum_probs=38.5
Q ss_pred eeecCCCcceeeCCCcEEeeeEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 436 SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
..++++ +.|+.++.+.++.||+++.||.+++|..... +.++..|..| ++|.++++||++|+
T Consensus 86 ~~Ig~~---~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~------IG~~~~Igag-svV~~~~~Ip~~sv 146 (194)
T 3tv0_A 86 MIIGTN---NVFEVGCYSQAMKMGDNNVIESKAYVGRNVI------LTSGCIIGAC-CNLNTFEVIPENTV 146 (194)
T ss_dssp EEECSS---CEECTTCEECCSEECSSCEECTTCEECTTEE------ECSSCEECTT-CEECCCEEECTTEE
T ss_pred eEECCc---ceEecceeEeeeeecccceecceeeECCeEE------ECCCCEECCC-CEECCCcEECCCCE
Confidence 456666 6777777777777777777777777765432 2333444445 55555666666654
No 103
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.53 E-value=2.7e-07 Score=94.86 Aligned_cols=39 Identities=21% Similarity=0.491 Sum_probs=19.9
Q ss_pred eeecCCCcceeeCCCcEE-----eeeEeCCCCEECCCcEEecCCCCc
Q 010554 436 SLLAEGKVPIGVGRNTKI-----RNCIIDKNVKIGKDVVIVNKDDVQ 477 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I-----~nsIIg~na~Ig~~~~i~~~~~~~ 477 (507)
.+|+++ |.||.|++| .+++||+++.|+.++.|.+...++
T Consensus 223 v~IGd~---v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I~~~v~IG 266 (372)
T 3pmo_A 223 VTIGDD---VEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIG 266 (372)
T ss_dssp EEECSS---CEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEEC
T ss_pred eEECCC---CEECCCcEEccCcccceEECCCCEECCCCEECCCCEEC
Confidence 344555 556666666 345555555555544444433333
No 104
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.53 E-value=2.3e-07 Score=85.75 Aligned_cols=88 Identities=14% Similarity=0.243 Sum_probs=61.8
Q ss_pred ceEEcCCcEEc-cceEeeeeEEeeccCceEeeeecCCCcceeeCCCcEE------------eeeEeCCCCEECCCcEEec
Q 010554 406 DAIISHGCFLR-ECTVEHSIVDYYQTESEIASLLAEGKVPIGVGRNTKI------------RNCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~Sii~~vg~~~~i~s~l~~g~~~~~Ig~~~~I------------~nsIIg~na~Ig~~~~i~~ 472 (507)
++.||++|.|+ ++.|....= ...|+++ |.|++++.| .+++||+++.||.++.|.+
T Consensus 33 ~v~IG~~~~I~~~~~i~~~~~---------~i~IG~~---~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~ 100 (187)
T 3r3r_A 33 DVRLADDVGIWPLVVIRGDVN---------YVAIGAR---TNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHG 100 (187)
T ss_dssp EEEECTTCEECTTCEEEEEEE---------EEEECTT---CEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEES
T ss_pred ceEECCCCEECCCcEEEcCCc---------cEEECCC---CEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeC
Confidence 55667777666 455543210 0134788 888999888 6789999999999998876
Q ss_pred CCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCccC
Q 010554 473 KDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 473 ~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~i 507 (507)
..+++......+..|.+| ++||++++|++|++|
T Consensus 101 -~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~~s~V 133 (187)
T 3r3r_A 101 -CTIGNRVLVGMGSIVLDG-AIIEDDVMIGAGSLV 133 (187)
T ss_dssp -CEECSSEEECTTCEECTT-CEECSSEEECTTCEE
T ss_pred -cEECCCCEECCCCEECCC-CEECCCCEECCCCEE
Confidence 467777777777777666 667777777777754
No 105
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.52 E-value=5.8e-07 Score=92.45 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=20.3
Q ss_pred CCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 459 DKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 459 g~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+.|++||+++.|.+...+.....++++..|.++ +.|..+++|+++++
T Consensus 266 ~~~v~IG~~~~i~~~~~v~~~~~Ig~~~~Ig~~-~~i~~~v~Ig~~~~ 312 (374)
T 2iu8_A 266 AHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQ-AGITGHICIADHVI 312 (374)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECSSCEECTT-CEECSSCEECTTEE
T ss_pred CCccEECCCCEEccCcccCCCcEECCCeEEecC-cEECCCcccCCCcE
Confidence 334444444444444433333344444444333 34444455555544
No 106
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.51 E-value=3e-07 Score=93.98 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=22.5
Q ss_pred eecCCCcceeeCCCcEE-eeeEeCCCCEECCCcEEe
Q 010554 437 LLAEGKVPIGVGRNTKI-RNCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I-~nsIIg~na~Ig~~~~i~ 471 (507)
.|+++ |.|+.+++| .+|+||++|.|+.+++|.
T Consensus 152 ~IG~~---~~I~~~~~I~~~~~IG~~~~I~~g~~Ig 184 (357)
T 4e79_A 152 EVGKD---CFIDSYVTITGSSKLRDRVRIHSSTVIG 184 (357)
T ss_dssp EECSS---CEECTTCEECTTCEECSSCEECTTCEES
T ss_pred EECCC---CEECCCcEEecccEEEeEeeccCCeEEC
Confidence 34666 667777777 467777888888777775
No 107
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.51 E-value=1.6e-07 Score=98.79 Aligned_cols=67 Identities=15% Similarity=0.275 Sum_probs=36.3
Q ss_pred eee-eceEEcCCcEEc-cceEeeeeE---EeeccCceEe-eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEe
Q 010554 402 CRI-KDAIISHGCFLR-ECTVEHSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 402 ~~I-~~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~ 471 (507)
|.| .++.||++|.|+ +|.|.+++| ..++.++.|. +.++++ +.||++++|. +++||++++||+++.|.
T Consensus 281 ~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~---~~ig~~~~i~~~~~ig~~~~Ig~~~~i~ 354 (459)
T 4fce_A 281 VIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDAN---CTVGPFARLRPGAELAEGAHVGNFVEIK 354 (459)
T ss_dssp EEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTT---CEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred eeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCC---CEECCccEECCCcEECCCcEECCCeEEe
Confidence 444 245666666666 566666555 2444444443 455555 5555555555 55555555555555544
No 108
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.50 E-value=3.3e-05 Score=80.91 Aligned_cols=259 Identities=13% Similarity=0.121 Sum_probs=149.8
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceee-cCcchhhHHHHHHHHhc----CCC-EEEEEeccC-chHHHHHHHhc-cc
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPV-AGCYRLIDIPMSNCINS----GIN-KIFVLTQFN-SASLNRHIART-YF 164 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI-~g~ypLId~~L~~l~~~----Gi~-~I~Vv~~~~-~~~l~~~l~~~-~~ 164 (507)
+++..|.||||.||||. ..-||.++|| .|+ .+++..++.+... |.. -.+|.|++. .+...+++.+. ||
T Consensus 75 ~kvavvlLaGGlGTRLG---~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~F 150 (484)
T 3gue_A 75 RQAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTL 150 (484)
T ss_dssp TTEEEEEEECCCCGGGT---CSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHH
T ss_pred hhcEEEEEcCCcccccC---CCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCccc
Confidence 47899999999999996 5789999999 566 9999999887653 332 456777654 56677777532 24
Q ss_pred CCC----cccCCCeEEEecCccC-C----CCCCC-CcccChHHHHHHH--HHHHHhhhcCCCCeEEEEcCceeccCCHHH
Q 010554 165 GNG----TNFGDGFVEVLAATQT-P----GESGK-NWFQGTADAVRQF--TWVFEDAKNRNIENVAILCGDHLYRMDYMD 232 (507)
Q Consensus 165 ~~~----~~~~~~~V~vl~~~q~-~----~~~~~-~~~~Gta~AL~~~--~~~l~~~~~~~~~~~lVl~gD~i~~~dl~~ 232 (507)
+.. .-|.+..+-.+..... + ..... ..|-|.|+-.... ...+++....+.+.+.+.+.|.+...---.
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 321 1122222222211110 0 00001 2246777655433 223444445678999999999976543256
Q ss_pred HHHHHHHcCCceEEEEEEcCCCCCccceEEEEC---------CCCc--EEEEEeCCCccccccccccccccCCCcccccc
Q 010554 233 FIQSHVDRDADITISCAAVGESRASDYGLVKID---------NMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEARK 301 (507)
Q Consensus 233 ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~id---------~~gr--V~~~~eKp~~~~~~~~~~~~~~~~~~~~~~~~ 301 (507)
++..+..+++++.+-+.+...++ ..-|++... .+|+ |+++.|-|..... ..+ ++ .
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~d-ekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~-~f~--------~~----~ 296 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTESD-KKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDED-SFQ--------NI----A 296 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTTC-CSSEEEEEEC--------CCCEEEEEEGGGSCGGGHH-HHT--------CT----T
T ss_pred HHHHHHhcCCCEEEEEEECCCCC-CceeEEEEEccccccccCCCCCEEEEEeccCCHHHHh-hhc--------CC----C
Confidence 78889999999988877655422 235644332 2454 4444444432211 000 00 0
Q ss_pred CCceeeeEEEEEeHHHHHHHHHhhC-----CC-----C--------------CchhhhhHHhhhhcCcEEEEEec-cEEE
Q 010554 302 CPYVASMGVYVFKKDVLFKLLRWRY-----PT-----S--------------NDFGSEIIPAAIMEHDVQAYIFR-DYWE 356 (507)
Q Consensus 302 ~~~l~~~Giyif~~~iL~~ll~~~~-----~~-----~--------------~d~~~dil~~li~~~~V~~~~~~-gyw~ 356 (507)
...+.+++-..++-..|.++++... +. . +.|..++++.+ .+..++.+. ..+.
T Consensus 297 g~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~---~~~~~ieV~R~rF~ 373 (484)
T 3gue_A 297 KHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF---DRSEAVVVPRERFA 373 (484)
T ss_dssp TSCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS---SSEEEEECCGGGCC
T ss_pred CceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC---CccEEEEEChhhcc
Confidence 1135588888999998888887531 10 0 11223333222 245555554 4466
Q ss_pred ecCCHHHHHHHHHHhh
Q 010554 357 DIGTIKSFYEANMALT 372 (507)
Q Consensus 357 dIgt~~~y~~An~~ll 372 (507)
-+-+..|++.+..++.
T Consensus 374 PvKn~sdLl~~~Sdly 389 (484)
T 3gue_A 374 PVKTCSDLLALRSDAY 389 (484)
T ss_dssp CCSSHHHHHHHHSTTE
T ss_pred ccccchHHHHHhhhce
Confidence 7788888877766554
No 109
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.49 E-value=3.6e-07 Score=88.50 Aligned_cols=49 Identities=10% Similarity=0.148 Sum_probs=23.7
Q ss_pred eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 456 CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 456 sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
++||+++.||.+|.|.+...+++...+..+..|.+ ++||+++.|++|++
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~--v~Ig~~~~Igagsv 189 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK--SKVGNNCVLEPRSA 189 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE--EEECTTCEECTTCE
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEec--eEECCCCEECCCCE
Confidence 55566655555555554333444444444444433 44455555544443
No 110
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.48 E-value=3.6e-07 Score=84.81 Aligned_cols=17 Identities=18% Similarity=0.477 Sum_probs=8.2
Q ss_pred eEeCCCCEECCCcEEec
Q 010554 456 CIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 456 sIIg~na~Ig~~~~i~~ 472 (507)
++||++|.||.++.|..
T Consensus 103 ~~Ig~~v~IG~~~~I~~ 119 (192)
T 3mqg_A 103 TIVRQGATLGANCTVVC 119 (192)
T ss_dssp EEECTTCEECTTCEECT
T ss_pred cEECCCcEECCCCEECC
Confidence 44444444554444443
No 111
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.47 E-value=2.4e-07 Score=93.61 Aligned_cols=110 Identities=13% Similarity=0.093 Sum_probs=59.5
Q ss_pred CCcCCCceec-ceeee-ceEEcCCcEEc-cceEeeeeE---EeeccCceEe-eeecCCCcceeeCCCcEEe-eeEeCCC-
Q 010554 391 PRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVEHSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIR-NCIIDKN- 461 (507)
Q Consensus 391 ~~~~~p~~i~-~~~I~-~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~-nsIIg~n- 461 (507)
+.+.+.+++. +++|. ++.||++|+|+ +|.|.+|+| ..++.++.|. ++++++ +.|+.++++. +|.|..|
T Consensus 66 a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~---~~I~~~~~i~~~s~I~~~~ 142 (334)
T 2pig_A 66 AMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREE---CAIYGDARVLNQSEILAIQ 142 (334)
T ss_dssp CEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESS---EEECTTCEEESSCEEEC--
T ss_pred eEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCC---eEEecCCEEeCCEEEeecc
Confidence 3344455554 46665 57788888887 677777777 2455555553 555555 5555555443 3444332
Q ss_pred ---------CEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 462 ---------VKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 462 ---------a~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
+.|++++.|.++ .+.+...+..+..|. + ++|++++.|+++++
T Consensus 143 ~~~~~~~~g~~I~~~a~I~~s-~I~~g~~I~~~a~I~-~-svI~~~a~I~~~a~ 193 (334)
T 2pig_A 143 GLTHEHAQILQIYDRATVNHS-RIVHQVQLYGNATIT-H-AFIEHRAEVFDFAL 193 (334)
T ss_dssp ------CCCEEECTTCEEESC-EEETTCEECTTCEEE-S-EEECTTCEECTTCE
T ss_pred eeecccCCCeEECCCCEEecc-EEcCCCEEcCCeEEe-C-cEEcCCCEECCCcE
Confidence 455555555542 333444444444443 3 55566666666554
No 112
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.47 E-value=3.2e-07 Score=85.45 Aligned_cols=49 Identities=14% Similarity=0.073 Sum_probs=24.7
Q ss_pred eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCcc
Q 010554 456 CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 506 (507)
Q Consensus 456 sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt~ 506 (507)
++||+++.|+.++.+.+ ..+++......+..|..| ++||+++.|++|++
T Consensus 86 ~~Ig~~~~i~~~~~i~~-~~Ig~~~~Ig~~~~I~~g-v~IG~~~~Igagsv 134 (194)
T 3tv0_A 86 MIIGTNNVFEVGCYSQA-MKMGDNNVIESKAYVGRN-VILTSGCIIGACCN 134 (194)
T ss_dssp EEECSSCEECTTCEECC-SEECSSCEECTTCEECTT-EEECSSCEECTTCE
T ss_pred eEECCcceEecceeEee-eeecccceecceeeECCe-EEECCCCEECCCCE
Confidence 34555555555555543 234444444444555555 55555555555554
No 113
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.47 E-value=2.3e-07 Score=92.61 Aligned_cols=29 Identities=10% Similarity=0.017 Sum_probs=14.1
Q ss_pred hhhcCcEEEEEec--cEEEecCCHHHHHHHH
Q 010554 340 AIMEHDVQAYIFR--DYWEDIGTIKSFYEAN 368 (507)
Q Consensus 340 li~~~~V~~~~~~--gyw~dIgt~~~y~~An 368 (507)
+++.+++.+.+.. |.|..-.-++......
T Consensus 61 ~l~~g~~r~a~~~~~g~w~~~~w~kk~ill~ 91 (304)
T 3eg4_A 61 LLDRGEVRVAEKQADGNWHVNQWLKKAVLLS 91 (304)
T ss_dssp HHHTTSSCSEEECTTSCEEECHHHHHHHHHH
T ss_pred HhcCCCeEEEEEcCCCceEEeeeeeeeeeee
Confidence 4455555555543 5566544444433333
No 114
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.46 E-value=4.5e-07 Score=92.13 Aligned_cols=39 Identities=21% Similarity=0.389 Sum_probs=18.5
Q ss_pred eecCCCcceeeCCCcEE-----eeeEeCCCCEECCCcEEecCCCCcc
Q 010554 437 LLAEGKVPIGVGRNTKI-----RNCIIDKNVKIGKDVVIVNKDDVQE 478 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I-----~nsIIg~na~Ig~~~~i~~~~~~~e 478 (507)
.|+++ |.||.++.| .+++||+++.|+.++.|.+...+++
T Consensus 202 ~IGd~---v~Ig~~~~I~~~~~~~~~Ig~~~~I~~~v~I~~~v~IG~ 245 (341)
T 3eh0_A 202 IIGDR---VEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGD 245 (341)
T ss_dssp EECSS---CEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECT
T ss_pred EECCC---cEECCccEeeccccCceEeccceEECCCCEEeCCcEECC
Confidence 44454 555555555 2445555544444444443333333
No 115
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.45 E-value=7.3e-07 Score=81.43 Aligned_cols=63 Identities=11% Similarity=0.149 Sum_probs=42.2
Q ss_pred eEEcCCcEEc-cceEe-----eeeE---EeeccCceEe-eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEec
Q 010554 407 AIISHGCFLR-ECTVE-----HSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 407 siIg~gc~I~-~~~I~-----~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~~ 472 (507)
+.||++|.|+ ++.|. +++| ..++.++.+. +.++++ +.||.++.|. ++.||++|.||.++.+..
T Consensus 50 ~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~---~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~ 123 (173)
T 1v3w_A 50 IYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNY---VIIGISSVILDGAKIGDHVIIGAGAVVPP 123 (173)
T ss_dssp EEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSS---EEECTTCEECTTCEECSSEEECTTCEECT
T ss_pred EEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCC---CEECCCCEEeCCCEECCCCEECCCCEECC
Confidence 6778888886 56665 3555 2566666664 667766 6777777765 467777777777776654
No 116
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.45 E-value=3.3e-07 Score=91.87 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=19.0
Q ss_pred eeeCCCcEEee---------eEeCCCCEECCCcEEecCCCCcc
Q 010554 445 IGVGRNTKIRN---------CIIDKNVKIGKDVVIVNKDDVQE 478 (507)
Q Consensus 445 ~~Ig~~~~I~n---------sIIg~na~Ig~~~~i~~~~~~~e 478 (507)
|.|+.++.|.+ ++||++|.||.+++|..+..+++
T Consensus 199 v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~ 241 (316)
T 3tk8_A 199 VHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEE 241 (316)
T ss_dssp CEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECT
T ss_pred CEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECC
Confidence 45555555544 56666666666666655433333
No 117
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.41 E-value=7.5e-07 Score=84.18 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=37.5
Q ss_pred eEEcCCcEEc-cceEee---------------eeE---EeeccCceEe--eeecCCCcceeeCCCcEEeeeEeCCCCEEC
Q 010554 407 AIISHGCFLR-ECTVEH---------------SIV---DYYQTESEIA--SLLAEGKVPIGVGRNTKIRNCIIDKNVKIG 465 (507)
Q Consensus 407 siIg~gc~I~-~~~I~~---------------Sii---~~vg~~~~i~--s~l~~g~~~~~Ig~~~~I~nsIIg~na~Ig 465 (507)
+.||++|.|+ +|.|.. ++| ..++.++.|. +.|+++ |.||.++.|.+++||++|.||
T Consensus 80 v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~Ig~~---v~IG~~a~I~~~~Ig~~~~Ig 156 (213)
T 3kwd_A 80 FHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPAYIGDG---CFIGFRSTVFNARVGAGCVVM 156 (213)
T ss_dssp EEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEEEECTT---CEECTTCEEEEEEECTTCEEC
T ss_pred eEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCCEECCC---CEECCCCEEeCcEECCCCEEc
Confidence 4666666665 455543 333 2455555552 566666 666777776666677777777
Q ss_pred CCcEEe
Q 010554 466 KDVVIV 471 (507)
Q Consensus 466 ~~~~i~ 471 (507)
+++.+.
T Consensus 157 ags~V~ 162 (213)
T 3kwd_A 157 MHVLIQ 162 (213)
T ss_dssp SSCEEE
T ss_pred CCCEEC
Confidence 766664
No 118
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.41 E-value=1.1e-06 Score=87.74 Aligned_cols=14 Identities=7% Similarity=0.071 Sum_probs=6.2
Q ss_pred EEEcCCCEeCCCcc
Q 010554 493 TIIMEKATIEDGMV 506 (507)
Q Consensus 493 ~vig~~~~i~~gt~ 506 (507)
++|.++++|+++++
T Consensus 181 ~~V~~~v~IG~~a~ 194 (305)
T 3t57_A 181 SVVHQFCHIGSFAF 194 (305)
T ss_dssp CEECTTCEECTTCE
T ss_pred CEEcCCeEECCCCE
Confidence 33344444444443
No 119
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.40 E-value=5.7e-07 Score=89.81 Aligned_cols=52 Identities=21% Similarity=0.315 Sum_probs=35.0
Q ss_pred eecCCCcceeeCCCcEEee---------eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCC
Q 010554 437 LLAEGKVPIGVGRNTKIRN---------CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSG 491 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I~n---------sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g 491 (507)
.|+++ |.|+.++.|.+ ++||+||.||.+|+|..+..+++...+..|..|..|
T Consensus 178 ~IG~~---v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~g 238 (304)
T 3eg4_A 178 QIGKN---VHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKS 238 (304)
T ss_dssp EECTT---CEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ccCCC---cEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCCEEcCC
Confidence 44666 67777777766 888888888888888776555555444444444444
No 120
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.40 E-value=6.1e-07 Score=88.42 Aligned_cols=12 Identities=17% Similarity=0.288 Sum_probs=6.0
Q ss_pred CcEEEEEeccEEE
Q 010554 344 HDVQAYIFRDYWE 356 (507)
Q Consensus 344 ~~V~~~~~~gyw~ 356 (507)
.++... .+|.|.
T Consensus 45 ~rv~~~-~~~~w~ 56 (276)
T 3gos_A 45 LRVAEK-IDGQWV 56 (276)
T ss_dssp SCSEEE-ETTEEE
T ss_pred cceeec-cCCcHh
Confidence 344443 456665
No 121
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.40 E-value=8.9e-07 Score=91.50 Aligned_cols=57 Identities=21% Similarity=0.291 Sum_probs=42.9
Q ss_pred CCceec-ceeee-ceEEcCCcEEc-cceEeeeeE---EeeccCceEe-eeecCCCcceeeCCCcEEe
Q 010554 395 PPTKID-NCRIK-DAIISHGCFLR-ECTVEHSIV---DYYQTESEIA-SLLAEGKVPIGVGRNTKIR 454 (507)
Q Consensus 395 ~p~~i~-~~~I~-~siIg~gc~I~-~~~I~~Sii---~~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~ 454 (507)
+.+.|+ ++.|. +++||++|.|+ ++.|.+|+| ..++.++.+. ++++++ +.||.+++|.
T Consensus 267 ~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~---~~Ig~~~~i~ 330 (401)
T 2ggo_A 267 KGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAED---VNFGAGTLIA 330 (401)
T ss_dssp TTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTT---CEECTTCEEC
T ss_pred CCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCC---cEECCCcEEc
Confidence 334443 35554 68899999998 688888888 3677777774 888998 8999999997
No 122
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.38 E-value=1.1e-06 Score=87.32 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=26.3
Q ss_pred eeecCCCcceeeCCCcEEee---------eEeCCCCEECCCcEE
Q 010554 436 SLLAEGKVPIGVGRNTKIRN---------CIIDKNVKIGKDVVI 470 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n---------sIIg~na~Ig~~~~i 470 (507)
+.|+++ |.|+.++.|.. ++||+||.||.|+.|
T Consensus 231 v~IGdn---v~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI 271 (347)
T 3r5d_A 231 VFVGKG---SDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI 271 (347)
T ss_dssp CEECTT---EEECTTCEECC------CCCCEECTTCEECTTCEE
T ss_pred EEECCC---CEECCCCEEccccCCCCccceEECCCCEECCCCEE
Confidence 567787 78888888865 788888888888888
No 123
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.35 E-value=1.2e-06 Score=86.66 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=25.3
Q ss_pred eeecCCCcceeeCCCcEEee---------eEeCCCCEECCCcEE
Q 010554 436 SLLAEGKVPIGVGRNTKIRN---------CIIDKNVKIGKDVVI 470 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~n---------sIIg~na~Ig~~~~i 470 (507)
+.|+++ |.|+.|+.|.. ++||+||.||.|+.|
T Consensus 208 v~IGd~---v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI 248 (332)
T 3fsy_A 208 VVVGDG---SDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL 248 (332)
T ss_dssp CEECTT---CEECTTCEECSBCC---CCBCEECTTCEECTTCEE
T ss_pred eEECCC---CEECCCCEEcCCCCCCCccceEECCCCEECCCCEE
Confidence 556777 77788877764 888888888888888
No 124
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.34 E-value=1.1e-06 Score=83.42 Aligned_cols=27 Identities=7% Similarity=0.251 Sum_probs=12.1
Q ss_pred eeeCCCcEEee-eEeCCCCEECCCcEEe
Q 010554 445 IGVGRNTKIRN-CIIDKNVKIGKDVVIV 471 (507)
Q Consensus 445 ~~Ig~~~~I~n-sIIg~na~Ig~~~~i~ 471 (507)
+.|+.++.|.+ ++||++|.||.+++|.
T Consensus 154 ~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~ 181 (220)
T 4ea9_A 154 CHLGPASALAGGVSVGERAFLGVGARVI 181 (220)
T ss_dssp CEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 34444444443 4444444444444444
No 125
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.34 E-value=1.7e-06 Score=88.33 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=20.3
Q ss_pred EEEeccEEEecCC--HHHHHHHHHHhhc
Q 010554 348 AYIFRDYWEDIGT--IKSFYEANMALTK 373 (507)
Q Consensus 348 ~~~~~gyw~dIgt--~~~y~~An~~ll~ 373 (507)
++....||.+.|. |++|....+.+..
T Consensus 165 g~l~~~~Wt~~G~~~~~~f~~~~~~l~~ 192 (387)
T 2rij_A 165 GLLSNVAWSDDKPIELEYLRANEMRLKM 192 (387)
T ss_dssp HHSCCEEEETTEEECHHHHHHHHHHHHH
T ss_pred ccCceeeeccCcccCHHHHHHHHHHHHh
Confidence 3344568999998 8999999988874
No 126
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.29 E-value=2e-06 Score=81.44 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=9.9
Q ss_pred eeEeCCCCEECCCcEEec
Q 010554 455 NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 455 nsIIg~na~Ig~~~~i~~ 472 (507)
+++||++|.||+++.|.+
T Consensus 100 ~i~IG~~~~Ig~~~~I~~ 117 (215)
T 2wlg_A 100 KISIGKDCMLAHGYEIRN 117 (215)
T ss_dssp EEEECTTCEECTTEEEES
T ss_pred CEEECCCCEEcCCEEEEC
Confidence 455555555555555554
No 127
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.29 E-value=2e-06 Score=79.73 Aligned_cols=10 Identities=10% Similarity=0.222 Sum_probs=4.4
Q ss_pred eEEcCCcEEc
Q 010554 407 AIISHGCFLR 416 (507)
Q Consensus 407 siIg~gc~I~ 416 (507)
+.||++|+|.
T Consensus 77 ~~IG~~~~i~ 86 (188)
T 3srt_A 77 IHVGENFFAN 86 (188)
T ss_dssp EEECTTEEEC
T ss_pred eEECCccccc
Confidence 3444444444
No 128
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.27 E-value=2.3e-06 Score=80.10 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=5.7
Q ss_pred eEeCCCCEECCCcEE
Q 010554 456 CIIDKNVKIGKDVVI 470 (507)
Q Consensus 456 sIIg~na~Ig~~~~i 470 (507)
|+|.++++||++|+|
T Consensus 143 ~~I~~gv~IG~~~vI 157 (199)
T 3ftt_A 143 VAVLPGVTIGEGSVI 157 (199)
T ss_dssp CEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEE
Confidence 333333333333333
No 129
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.25 E-value=2.7e-06 Score=79.22 Aligned_cols=20 Identities=10% Similarity=0.189 Sum_probs=11.2
Q ss_pred EEEecCCHHHHHHHHHHhhc
Q 010554 354 YWEDIGTIKSFYEANMALTK 373 (507)
Q Consensus 354 yw~dIgt~~~y~~An~~ll~ 373 (507)
+..-++++...++....+.+
T Consensus 50 ~~iaig~~~~r~~~~~~l~~ 69 (194)
T 3bfp_A 50 FFIAIGNNEIRKKIYQKISE 69 (194)
T ss_dssp EEECCCCHHHHHHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHHHHHH
Confidence 34556677665555555543
No 130
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.22 E-value=2.7e-06 Score=79.37 Aligned_cols=9 Identities=11% Similarity=0.246 Sum_probs=3.6
Q ss_pred EEcCCcEEc
Q 010554 408 IISHGCFLR 416 (507)
Q Consensus 408 iIg~gc~I~ 416 (507)
+||++|.|+
T Consensus 98 ~IG~~~~Ig 106 (195)
T 3nz2_A 98 TIGDHVLIG 106 (195)
T ss_dssp EECTTCEEC
T ss_pred EECCCCEEC
Confidence 334444443
No 131
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.22 E-value=3.7e-06 Score=78.74 Aligned_cols=19 Identities=32% Similarity=0.504 Sum_probs=12.0
Q ss_pred eeeEeCCCCEECCCcEEec
Q 010554 454 RNCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 454 ~nsIIg~na~Ig~~~~i~~ 472 (507)
.+++||++|.||.++.|..
T Consensus 133 ~~v~IG~~v~IG~~~~I~~ 151 (205)
T 3vbi_A 133 GKVILKKHVIIGAHSIIFP 151 (205)
T ss_dssp CCEEECTTCEECTTCEECS
T ss_pred CCEEECCCCEECCCCEEcC
Confidence 3466666666666666654
No 132
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.17 E-value=3.2e-06 Score=83.23 Aligned_cols=78 Identities=14% Similarity=0.278 Sum_probs=42.7
Q ss_pred CcCCCceec-ceeee---ceEEcCCcEEc-cceEeeee-EEeeccCceE-eeeecCCCcceeeCCCcEEe-eeEeCCCCE
Q 010554 392 RFLPPTKID-NCRIK---DAIISHGCFLR-ECTVEHSI-VDYYQTESEI-ASLLAEGKVPIGVGRNTKIR-NCIIDKNVK 463 (507)
Q Consensus 392 ~~~~p~~i~-~~~I~---~siIg~gc~I~-~~~I~~Si-i~~vg~~~~i-~s~l~~g~~~~~Ig~~~~I~-nsIIg~na~ 463 (507)
.+.|.++|+ ++.|. +++||++|.|+ +|.|.+.+ |+..+.+... ...|+++ |.||.|++|. ++.||+||+
T Consensus 166 ~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~---v~IGaga~Il~gv~IG~~a~ 242 (287)
T 3mc4_A 166 DIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQG---VLIGAGAKILGNIQVGQCSK 242 (287)
T ss_dssp EECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTT---CEECTTCEEESSCEECTTCE
T ss_pred EECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCC---CEECCCCEECCCcEECCCCE
Confidence 344445555 24443 45556666665 34443322 1100001111 1466777 7788888877 588888888
Q ss_pred ECCCcEEec
Q 010554 464 IGKDVVIVN 472 (507)
Q Consensus 464 Ig~~~~i~~ 472 (507)
||.|+++..
T Consensus 243 IGagsvV~k 251 (287)
T 3mc4_A 243 IAAGSVVLK 251 (287)
T ss_dssp ECTTCEECS
T ss_pred ECCCCEEcc
Confidence 888888864
No 133
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.16 E-value=4.4e-06 Score=77.51 Aligned_cols=8 Identities=25% Similarity=0.746 Sum_probs=3.1
Q ss_pred EcCCcEEc
Q 010554 409 ISHGCFLR 416 (507)
Q Consensus 409 Ig~gc~I~ 416 (507)
||++|.|+
T Consensus 101 IG~~~~Ig 108 (190)
T 3hjj_A 101 IGDHCMFA 108 (190)
T ss_dssp ECTTCEEC
T ss_pred ECCceEEc
Confidence 33333333
No 134
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.15 E-value=1.1e-06 Score=83.52 Aligned_cols=17 Identities=41% Similarity=0.575 Sum_probs=7.9
Q ss_pred eEeCCCCEECCCcEEec
Q 010554 456 CIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 456 sIIg~na~Ig~~~~i~~ 472 (507)
++||++|.||.+|+|..
T Consensus 120 v~IG~~v~IG~~a~I~~ 136 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMP 136 (220)
T ss_dssp EEECSSCEECTTCEECT
T ss_pred eEECCCcEECCCCEEeC
Confidence 34444444444444443
No 135
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.14 E-value=1.5e-06 Score=86.40 Aligned_cols=13 Identities=15% Similarity=0.409 Sum_probs=6.0
Q ss_pred EEcCCCEeCCCcc
Q 010554 494 IIMEKATIEDGMV 506 (507)
Q Consensus 494 vig~~~~i~~gt~ 506 (507)
.||++++|++|++
T Consensus 274 tIGd~~iIGAGSV 286 (347)
T 3r5d_A 274 PLGDRNIVEAGLY 286 (347)
T ss_dssp CBCTTCEECTTCE
T ss_pred EECCCCEECCCCE
Confidence 3444444444443
No 136
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.12 E-value=2.7e-06 Score=89.36 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=57.9
Q ss_pred ceEEcCCcEEccceEeeeeE---EeeccCceE-eeeecCCCcceeeCCCcEEeeeEeCCC-------------------C
Q 010554 406 DAIISHGCFLRECTVEHSIV---DYYQTESEI-ASLLAEGKVPIGVGRNTKIRNCIIDKN-------------------V 462 (507)
Q Consensus 406 ~siIg~gc~I~~~~I~~Sii---~~vg~~~~i-~s~l~~g~~~~~Ig~~~~I~nsIIg~n-------------------a 462 (507)
++.|++++.|.++.|.+++| +.++. +.+ .+.|+++ |.||++|+|.++++..+ +
T Consensus 314 ~~~i~~~~~i~~~~I~~~~Ig~~~~I~~-~~i~~~~Ig~~---~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 389 (451)
T 1yp2_A 314 QPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLR---SCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPI 389 (451)
T ss_dssp CCCCCCCEEEEEEEEEEEEECTTCEEEE-EEEESCEECTT---CEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCS
T ss_pred CCccCCCeEEcceEEeCeEECCCCEEcc-eEEeccEECCC---CEECCCCEEcCceEECCCCcccccccccccccCceeE
Confidence 34455555554455555444 12332 344 3788888 88999999988888777 8
Q ss_pred EECCCcEEecCCCCccCCCCCCCeEEcCC--e---EEEcCCCEeCCC
Q 010554 463 KIGKDVVIVNKDDVQEADRPELGFYIRSG--I---TIIMEKATIEDG 504 (507)
Q Consensus 463 ~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g--~---~vig~~~~i~~g 504 (507)
.||+|+.|.+ ..+++...++.+..|..+ + .+||+++.|++|
T Consensus 390 ~Ig~~~~i~~-~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~ 435 (451)
T 1yp2_A 390 GIGKNCHIKR-AIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSG 435 (451)
T ss_dssp EECTTCEEES-EEECTTCEECTTCEECCSSCCSCEEEGGGTEEEETT
T ss_pred EECCCCEEec-cEeCCCcEECCCCEEeCCcccccCceeCCCEEEcCC
Confidence 8888888875 356666666666666432 1 244555444444
No 137
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.09 E-value=7e-06 Score=79.62 Aligned_cols=16 Identities=38% Similarity=0.636 Sum_probs=8.4
Q ss_pred EeCCCCEECCCcEEec
Q 010554 457 IIDKNVKIGKDVVIVN 472 (507)
Q Consensus 457 IIg~na~Ig~~~~i~~ 472 (507)
+||++|.||.++.|..
T Consensus 165 ~Igd~v~IG~~a~I~~ 180 (252)
T 3jqy_B 165 IISSYVWVGRNVSIMK 180 (252)
T ss_dssp EECSSCEECSSEEECT
T ss_pred EEecCcEECCCCEECC
Confidence 5555555555555544
No 138
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.08 E-value=1.1e-05 Score=86.10 Aligned_cols=88 Identities=18% Similarity=0.251 Sum_probs=52.9
Q ss_pred ceEEcCCcEEc-cceEeeeeEE---eeccCceEe-eeecCCCcceeeCCCcEEee--------eEeCCCCEECCCcEEec
Q 010554 406 DAIISHGCFLR-ECTVEHSIVD---YYQTESEIA-SLLAEGKVPIGVGRNTKIRN--------CIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~Sii~---~vg~~~~i~-s~l~~g~~~~~Ig~~~~I~n--------sIIg~na~Ig~~~~i~~ 472 (507)
+++|+++|.|+ .+.+.+|+|+ .++..+.+. +.|+++ |.||.||.+-| ++||++|.||.++.|..
T Consensus 352 ~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~---v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~ 428 (501)
T 3st8_A 352 GTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEY---SNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVA 428 (501)
T ss_dssp TCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSS---CEECTTCEEECBCSSSBCCEEECTTCEECTTCEEES
T ss_pred CcEEccccccCCeEEEccceecCCcEEeccceecCceEcCC---CEECCCEEEEcccCCcccCCEECCCcEECCCCEEcC
Confidence 45666666666 3456666551 222222232 556788 78888888865 88888888888888876
Q ss_pred CCCCccCCCCCCCeEEcCCeEEEcCCCEeCCCc
Q 010554 473 KDDVQEADRPELGFYIRSGITIIMEKATIEDGM 505 (507)
Q Consensus 473 ~~~~~e~~~~~~~~~i~~g~~vig~~~~i~~gt 505 (507)
.. +++++.+|..| ++|.++ ||+|+
T Consensus 429 ~v------~Ig~~~~i~ag-s~v~~d--vp~~~ 452 (501)
T 3st8_A 429 PV------TIGDGAYTGAG-TVVRED--VPPGA 452 (501)
T ss_dssp SE------EECTTCEECTT-CEECSC--BCTTC
T ss_pred Cc------EECCCCEECCC-CEECcc--cCCCC
Confidence 43 33444555555 555555 45554
No 139
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.08 E-value=2.7e-06 Score=84.10 Aligned_cols=11 Identities=18% Similarity=0.217 Sum_probs=5.4
Q ss_pred ceEEcCCcEEc
Q 010554 406 DAIISHGCFLR 416 (507)
Q Consensus 406 ~siIg~gc~I~ 416 (507)
.+.||+||.|+
T Consensus 173 gA~IGeGv~Ig 183 (332)
T 3fsy_A 173 GAHLAPGTTVM 183 (332)
T ss_dssp TEEECTTCEEC
T ss_pred CCEECCCCEEc
Confidence 34455555554
No 140
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.07 E-value=8e-06 Score=75.52 Aligned_cols=14 Identities=21% Similarity=0.558 Sum_probs=6.7
Q ss_pred eEEcCCcEEc-cceE
Q 010554 407 AIISHGCFLR-ECTV 420 (507)
Q Consensus 407 siIg~gc~I~-~~~I 420 (507)
..||++|.|+ +|.|
T Consensus 95 i~IG~~v~Ig~~v~I 109 (185)
T 2p2o_A 95 VRIGDHCFIGPGVHI 109 (185)
T ss_dssp EEECTTCEECTTCEE
T ss_pred eEECCCcEEeCCCEE
Confidence 4455555554 3443
No 141
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.04 E-value=1e-05 Score=75.94 Aligned_cols=27 Identities=37% Similarity=0.574 Sum_probs=10.9
Q ss_pred eeeCCCcEEe-eeEeCCCCEECCCcEEe
Q 010554 445 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 445 ~~Ig~~~~I~-nsIIg~na~Ig~~~~i~ 471 (507)
+.||++|.|. +|+|.++++||+||+|+
T Consensus 132 v~IGd~v~IG~~a~I~~gv~IG~~~vIg 159 (203)
T 1krr_A 132 ITIGNNVWIGSHVVINPGVTIGDNSVIG 159 (203)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEECCCeEECCCCEEeCCeEECCCCEEC
Confidence 3344444443 34444444444444443
No 142
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.03 E-value=1e-05 Score=74.67 Aligned_cols=8 Identities=38% Similarity=0.904 Sum_probs=3.0
Q ss_pred EcCCcEEc
Q 010554 409 ISHGCFLR 416 (507)
Q Consensus 409 Ig~gc~I~ 416 (507)
||++|.|+
T Consensus 95 IG~~v~Ig 102 (182)
T 1ocx_A 95 IGDNCMLA 102 (182)
T ss_dssp ECTTCEEC
T ss_pred EcCCcEEe
Confidence 33333333
No 143
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.01 E-value=4.1e-06 Score=83.62 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=16.8
Q ss_pred eecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEe
Q 010554 437 LLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~ 471 (507)
.|+++ |.||.|++|. ++.||+||.||.|+++.
T Consensus 225 ~IGd~---v~IGaga~Ilggv~IG~~a~IGagsvV~ 257 (313)
T 3q1x_A 225 TVGDY---VTIGTGAKVLGNIIVGSHVRIGANCWID 257 (313)
T ss_dssp EECSS---CEECTTCEEESSCEECSSEEECTTCEEC
T ss_pred EECCC---CEECCCCEECCCcEECCCCEECCCCEEC
Confidence 45555 5555555544 35555555555555554
No 144
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.01 E-value=6.2e-06 Score=82.21 Aligned_cols=78 Identities=17% Similarity=0.298 Sum_probs=42.6
Q ss_pred CCCcCCCceec-ceeee---ceEEcCCcEEc-cceEeeeeEEeeccCc-----------eE--eeeecCCCcceeeCCCc
Q 010554 390 SPRFLPPTKID-NCRIK---DAIISHGCFLR-ECTVEHSIVDYYQTES-----------EI--ASLLAEGKVPIGVGRNT 451 (507)
Q Consensus 390 ~~~~~~p~~i~-~~~I~---~siIg~gc~I~-~~~I~~Sii~~vg~~~-----------~i--~s~l~~g~~~~~Ig~~~ 451 (507)
...+.|.++|+ ++.|. +++||++|.|+ +|.|...+. +|..+ .+ ...|+++ |.||.|+
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvt--Ig~~~~~~~~~g~~i~~~~~~~~IGd~---V~IGaga 264 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVT--LGAKSFPLDNNGNPIKGIPRHPILEDD---VIVYSNA 264 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCE--EECC--------------CCSCEECTT---CEECTTC
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCE--ECCCccccccccccccCCCCCCEECCC---cEEcCCC
Confidence 34455556666 35552 56777777776 455533221 22222 01 1356666 6666666
Q ss_pred EEe-eeEeCCCCEECCCcEEec
Q 010554 452 KIR-NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 452 ~I~-nsIIg~na~Ig~~~~i~~ 472 (507)
+|. ++.||+||+||.|+++..
T Consensus 265 ~Il~gv~IGd~a~IGagsvV~~ 286 (310)
T 3f1x_A 265 TILGRVTIGKGATVGGNIWVTE 286 (310)
T ss_dssp EEESSCEECTTCEECSSCEECS
T ss_pred EECCCcEECCCCEECCCCEECC
Confidence 666 566666666666666653
No 145
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.00 E-value=1.2e-05 Score=78.40 Aligned_cols=28 Identities=7% Similarity=-0.001 Sum_probs=25.1
Q ss_pred CCeEE--EEcCceeccCCHHHHHHHHHHcC
Q 010554 214 IENVA--ILCGDHLYRMDYMDFIQSHVDRD 241 (507)
Q Consensus 214 ~~~~l--Vl~gD~i~~~dl~~ll~~h~~~~ 241 (507)
.|++| ++++|++...+|.+++.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 38999 99999999999999999998764
No 146
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=97.96 E-value=1.6e-05 Score=78.44 Aligned_cols=28 Identities=7% Similarity=0.000 Sum_probs=25.3
Q ss_pred CCeEE--EEcCceeccCCHHHHHHHHHHcC
Q 010554 214 IENVA--ILCGDHLYRMDYMDFIQSHVDRD 241 (507)
Q Consensus 214 ~~~~l--Vl~gD~i~~~dl~~ll~~h~~~~ 241 (507)
.+++| ++++|++...+|.+++.+|...+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 48999 99999999999999999998764
No 147
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=97.83 E-value=3.6e-05 Score=71.61 Aligned_cols=47 Identities=23% Similarity=0.404 Sum_probs=30.0
Q ss_pred ecCCCcceeeCCCcEEee-------------------eEeCCCCEECCCcEEecCCCCccCCCCCCCeEEcCCeEEEcCC
Q 010554 438 LAEGKVPIGVGRNTKIRN-------------------CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEK 498 (507)
Q Consensus 438 l~~g~~~~~Ig~~~~I~n-------------------sIIg~na~Ig~~~~i~~~~~~~e~~~~~~~~~i~~g~~vig~~ 498 (507)
|+++ |.||.++.|.. ++||+||.||.|++|..+ ++||++
T Consensus 99 IG~~---~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g-------------------v~IG~~ 156 (195)
T 3nz2_A 99 IGDH---VLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQG-------------------VTIGAR 156 (195)
T ss_dssp ECTT---CEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTT-------------------CEECTT
T ss_pred ECCC---CEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCC-------------------CEECCC
Confidence 4676 77777777754 466666666666666543 455666
Q ss_pred CEeCCCcc
Q 010554 499 ATIEDGMV 506 (507)
Q Consensus 499 ~~i~~gt~ 506 (507)
++|++|++
T Consensus 157 ~vIgagsv 164 (195)
T 3nz2_A 157 SVVAANSV 164 (195)
T ss_dssp CEECTTCE
T ss_pred CEECCCCE
Confidence 66666655
No 148
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=97.81 E-value=0.00015 Score=67.99 Aligned_cols=27 Identities=22% Similarity=0.414 Sum_probs=12.6
Q ss_pred eeeCCCcEEe-eeEeCCCCEECCCcEEe
Q 010554 445 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 471 (507)
Q Consensus 445 ~~Ig~~~~I~-nsIIg~na~Ig~~~~i~ 471 (507)
|.||.|+.|. ++.||+||.||.++++.
T Consensus 138 v~IG~~a~I~~gv~IG~~~vIgagsvV~ 165 (203)
T 1krr_A 138 VWIGSHVVINPGVTIGDNSVIGAGSIVT 165 (203)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEEeCCeEECCCCEECCCCEEC
Confidence 4444444444 34444444444444443
No 149
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=97.78 E-value=7.9e-05 Score=70.24 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=20.4
Q ss_pred eecCCCcceeeCCCcEEeee--------------------EeCCCCEECCCcEEec
Q 010554 437 LLAEGKVPIGVGRNTKIRNC--------------------IIDKNVKIGKDVVIVN 472 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I~ns--------------------IIg~na~Ig~~~~i~~ 472 (507)
.|+++ |.||++++|.++ +||++|.||.+++|..
T Consensus 102 ~IG~~---~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~ 154 (215)
T 2wlg_A 102 SIGKD---CMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILK 154 (215)
T ss_dssp EECTT---CEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECT
T ss_pred EECCC---CEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECC
Confidence 45666 666777776653 6666666666666654
No 150
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=97.76 E-value=3.1e-05 Score=73.01 Aligned_cols=15 Identities=13% Similarity=0.262 Sum_probs=8.0
Q ss_pred ceEEcCCcEEc-cceE
Q 010554 406 DAIISHGCFLR-ECTV 420 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I 420 (507)
++.||++|.|+ +++|
T Consensus 58 ~v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 58 KLVIGSFCSIGSGAVF 73 (212)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CcEECCCCEECCCCEE
Confidence 34566666665 3433
No 151
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=97.74 E-value=2.8e-05 Score=76.52 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=22.4
Q ss_pred eecCCCcceeeCCCcEEee---------eEeCCCCEECCCcEEecC
Q 010554 437 LLAEGKVPIGVGRNTKIRN---------CIIDKNVKIGKDVVIVNK 473 (507)
Q Consensus 437 ~l~~g~~~~~Ig~~~~I~n---------sIIg~na~Ig~~~~i~~~ 473 (507)
.|+++ |.|+.+++|.+ ++||+||.||.|++|...
T Consensus 192 ~IGd~---v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~g 234 (287)
T 3mc4_A 192 VVEDN---VSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGN 234 (287)
T ss_dssp EECSS---CEEETTCEEEC-----CCCSCEECTTCEECTTCEEESS
T ss_pred EECCC---CEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCC
Confidence 34555 55666666654 577777777777777654
No 152
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=97.71 E-value=6.1e-05 Score=69.70 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=21.7
Q ss_pred ecCCCcceeeCCCcEEee-------------------eEeCCCCEECCCcEEec
Q 010554 438 LAEGKVPIGVGRNTKIRN-------------------CIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 438 l~~g~~~~~Ig~~~~I~n-------------------sIIg~na~Ig~~~~i~~ 472 (507)
|+++ |.||.++.|.+ ++||++|.||.+++|..
T Consensus 101 IG~~---~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~ 151 (190)
T 3hjj_A 101 IGDH---CMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINP 151 (190)
T ss_dssp ECTT---CEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECT
T ss_pred ECCc---eEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECC
Confidence 4777 77888888843 46666666666666654
No 153
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=97.70 E-value=5.5e-05 Score=75.47 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=11.8
Q ss_pred eeEeCCCCEECCCcEEec
Q 010554 455 NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 455 nsIIg~na~Ig~~~~i~~ 472 (507)
+++||+||.||.||+|..
T Consensus 223 ~~~IGd~v~IGaga~Ilg 240 (313)
T 3q1x_A 223 HPTVGDYVTIGTGAKVLG 240 (313)
T ss_dssp SCEECSSCEECTTCEEES
T ss_pred CCEECCCCEECCCCEECC
Confidence 346777777777776654
No 154
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=97.66 E-value=3.7e-05 Score=71.77 Aligned_cols=54 Identities=13% Similarity=0.272 Sum_probs=32.3
Q ss_pred ceEEcCCcEEc-cceEeeeeEEeeccCceEeeeecCCCcceeeCCCcEEee-------------------eEeCCCCEEC
Q 010554 406 DAIISHGCFLR-ECTVEHSIVDYYQTESEIASLLAEGKVPIGVGRNTKIRN-------------------CIIDKNVKIG 465 (507)
Q Consensus 406 ~siIg~gc~I~-~~~I~~Sii~~vg~~~~i~s~l~~g~~~~~Ig~~~~I~n-------------------sIIg~na~Ig 465 (507)
++.||++|+|+ +|.|.++- ...|+++ |.||+||.|.+ ++||+||.||
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~----------~v~IG~~---v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG 140 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGG----------QITIGDN---VFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFG 140 (199)
T ss_dssp TEEECSSEEECTTEEEECSS----------CEEECSS---EEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEEC
T ss_pred CcEECCCeEECCCeEEecCC----------EEEECCC---CEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEc
Confidence 45566666665 44443220 0124777 88888888843 3577777777
Q ss_pred CCcEEec
Q 010554 466 KDVVIVN 472 (507)
Q Consensus 466 ~~~~i~~ 472 (507)
.+++|..
T Consensus 141 ~~~~I~~ 147 (199)
T 3ftt_A 141 GHVAVLP 147 (199)
T ss_dssp TTCEECT
T ss_pred CCCEECC
Confidence 7777754
No 155
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=97.63 E-value=0.0002 Score=69.89 Aligned_cols=34 Identities=35% Similarity=0.552 Sum_probs=24.6
Q ss_pred eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEec
Q 010554 436 SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~~ 472 (507)
..|+++ |.||.|++|. ++.||++|+||.|+++..
T Consensus 190 ~~IGd~---v~IGaga~Il~gv~IG~~a~IGagsvV~~ 224 (267)
T 1ssq_A 190 PKVREG---VMIGAGAKILGNIEVGKYAKIGANSVVLN 224 (267)
T ss_dssp CEECTT---CEECTTCEEESSCEECTTCEECTTCEECS
T ss_pred eEECCC---eEEcCCCEEeCCcEECCCCEECCCCEEcc
Confidence 456777 7777777775 577777777777777764
No 156
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=97.61 E-value=0.00045 Score=63.61 Aligned_cols=11 Identities=9% Similarity=0.389 Sum_probs=5.5
Q ss_pred ceEEcCCcEEc
Q 010554 406 DAIISHGCFLR 416 (507)
Q Consensus 406 ~siIg~gc~I~ 416 (507)
+..||++|+|.
T Consensus 74 ~v~IG~~~~i~ 84 (185)
T 2p2o_A 74 NIHVGENFFMN 84 (185)
T ss_dssp TEEECTTEEEC
T ss_pred CEEECCeeEEc
Confidence 34455555554
No 157
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=97.59 E-value=6.9e-05 Score=69.26 Aligned_cols=65 Identities=22% Similarity=0.403 Sum_probs=45.0
Q ss_pred cCCCcCCCceec---ceeee-ceEEcCCcEEcc-ceEeeeeEEeeccCceEeeeecCCCcceeeCCCcEE----------
Q 010554 389 TSPRFLPPTKID---NCRIK-DAIISHGCFLRE-CTVEHSIVDYYQTESEIASLLAEGKVPIGVGRNTKI---------- 453 (507)
Q Consensus 389 ~~~~~~~p~~i~---~~~I~-~siIg~gc~I~~-~~I~~Sii~~vg~~~~i~s~l~~g~~~~~Ig~~~~I---------- 453 (507)
....+.+|..+. ++.|. +++|+++|.|.+ +.|. |+++ |.||.++.|
T Consensus 61 ~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~i~----------------IG~~---~~Ig~~v~I~~~~h~~~~~ 121 (188)
T 3srt_A 61 KQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIE----------------IGDN---VMLAPNVQIYTAYHPIDAQ 121 (188)
T ss_dssp SCEEECSCEEESSSTTEEECTTEEECTTEEEECSSCEE----------------ECSS---CEECTTCEEECEECCSSHH
T ss_pred CCCEEcCCEEEEeCCCeEECCcccccCceEEecCCceE----------------ECCe---eEECCCcEEeeCCccCchh
Confidence 344556676663 57776 788999998873 3331 3777 788888888
Q ss_pred ---------eeeEeCCCCEECCCcEEec
Q 010554 454 ---------RNCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 454 ---------~nsIIg~na~Ig~~~~i~~ 472 (507)
..++||+||.||.+|+|..
T Consensus 122 ~~~~~~~~~~~v~IG~~v~IG~~~~I~~ 149 (188)
T 3srt_A 122 LRNSGIEYGSPVKIGDNVWIGGGVIITP 149 (188)
T ss_dssp HHHTTEEEECCEEECSSCEECTTCEECT
T ss_pred hccccceECCCcEECCCcEEcCCCEECC
Confidence 3567777777777777764
No 158
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=97.59 E-value=0.00024 Score=70.01 Aligned_cols=34 Identities=29% Similarity=0.523 Sum_probs=24.3
Q ss_pred eeecCCCcceeeCCCcEEe-eeEeCCCCEECCCcEEec
Q 010554 436 SLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVN 472 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~-nsIIg~na~Ig~~~~i~~ 472 (507)
..|+++ |.||.|++|. ++.||++|+||.|+++..
T Consensus 210 ~~IGd~---v~IGaga~Ilggv~IG~~a~IGagsvV~~ 244 (289)
T 1t3d_A 210 PKIREG---VMIGAGAKILGNIEVGRGAKIGAGSVVLQ 244 (289)
T ss_dssp CEECTT---CEECTTCEEESSCEECTTCEECTTCEECS
T ss_pred eEECCC---eEECCCCEEecCcEECCCCEECCCCEEcc
Confidence 456777 7777777776 577777777777777764
No 159
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=97.52 E-value=5e-05 Score=77.55 Aligned_cols=31 Identities=26% Similarity=0.450 Sum_probs=17.7
Q ss_pred eeecCCCcceeeCCCcEEe----e-----eEeCCCCEECCCcE
Q 010554 436 SLLAEGKVPIGVGRNTKIR----N-----CIIDKNVKIGKDVV 469 (507)
Q Consensus 436 s~l~~g~~~~~Ig~~~~I~----n-----sIIg~na~Ig~~~~ 469 (507)
+.|+++ |.|+.++.|. + ++||++|.||.|+.
T Consensus 265 vvIGdn---v~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv 304 (387)
T 2rij_A 265 AIVGEG---SDVGGGASILGVLSGTSGNAISVGKACLLGANSV 304 (387)
T ss_dssp CEECTT---CEECTTCEECCBCSSTTCCBCEECTTCEECTTCE
T ss_pred CEECCC---CEECCCceEcceecCCCccCeEEeCCCEECCCCc
Confidence 344555 5566666432 2 56666666666666
No 160
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=97.52 E-value=7.1e-05 Score=74.53 Aligned_cols=16 Identities=19% Similarity=0.443 Sum_probs=10.6
Q ss_pred EeCCCCEECCCcEEec
Q 010554 457 IIDKNVKIGKDVVIVN 472 (507)
Q Consensus 457 IIg~na~Ig~~~~i~~ 472 (507)
+||+||.||.|++|..
T Consensus 253 ~IGd~V~IGaga~Il~ 268 (310)
T 3f1x_A 253 ILEDDVIVYSNATILG 268 (310)
T ss_dssp EECTTCEECTTCEEES
T ss_pred EECCCcEEcCCCEECC
Confidence 5666666666666664
No 161
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=97.49 E-value=0.0011 Score=60.89 Aligned_cols=16 Identities=44% Similarity=0.470 Sum_probs=7.1
Q ss_pred eEeCCCCEECCCcEEe
Q 010554 456 CIIDKNVKIGKDVVIV 471 (507)
Q Consensus 456 sIIg~na~Ig~~~~i~ 471 (507)
++||++|.||.+++|.
T Consensus 129 v~IG~~v~Ig~~a~I~ 144 (182)
T 1ocx_A 129 VTIGNNVWIGGRAVIN 144 (182)
T ss_dssp EEECTTCEECTTCEEC
T ss_pred eEEeCCeEECCCCEEC
Confidence 4444444444444443
No 162
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.48 E-value=0.0017 Score=69.76 Aligned_cols=220 Identities=14% Similarity=0.138 Sum_probs=123.7
Q ss_pred CceEEEEEcCCCCCcccCCccCCCccceeec---CcchhhHHHHHHHHhc-CCC-EEEEEecc-CchHHHHHHHhcccCC
Q 010554 93 KNVAAIILGGGAGTKLFPLTLRAATPAVPVA---GCYRLIDIPMSNCINS-GIN-KIFVLTQF-NSASLNRHIARTYFGN 166 (507)
Q Consensus 93 ~~~~aVILAaG~GtRL~PLT~~~PK~LlPI~---g~ypLId~~L~~l~~~-Gi~-~I~Vv~~~-~~~~l~~~l~~~~~~~ 166 (507)
+++..|+||||.||||. ...||.++|++ |+ +++++.++++.+. |.. -++|.|++ ..+...+++.+ | +.
T Consensus 113 ~kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-f-gl 186 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-L-QL 186 (630)
T ss_dssp GGEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-T-TC
T ss_pred hhceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-h-CC
Confidence 47899999999999997 57899999997 88 9999999998863 432 45666654 46777888865 4 32
Q ss_pred Ccc----cCCCeEEEecCcc-C-C-CCCC--CCcccChHHHHHHHHH--------------------HHHhhhcCCCCeE
Q 010554 167 GTN----FGDGFVEVLAATQ-T-P-GESG--KNWFQGTADAVRQFTW--------------------VFEDAKNRNIENV 217 (507)
Q Consensus 167 ~~~----~~~~~V~vl~~~q-~-~-~~~~--~~~~~Gta~AL~~~~~--------------------~l~~~~~~~~~~~ 217 (507)
... |.++.+-.+.... . . .+.+ ...+-|.|+-...... .+++....+.+.+
T Consensus 187 ~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi 266 (630)
T 3ogz_A 187 EVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESI 266 (630)
T ss_dssp CCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEE
T ss_pred CcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEE
Confidence 110 1111122111000 0 0 0000 1224577775544322 4555445678999
Q ss_pred EEEcCceec-cCCHHHHHHHHHHcCCceEEEEEEcCCCCCccceEEEE--CCCCcE-E-EEEe---CCCccccccccccc
Q 010554 218 AILCGDHLY-RMDYMDFIQSHVDRDADITISCAAVGESRASDYGLVKI--DNMGRI-A-QFAE---KPSGANLKAMQVDT 289 (507)
Q Consensus 218 lVl~gD~i~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~i--d~~grV-~-~~~e---Kp~~~~~~~~~~~~ 289 (507)
.+.+-|.+. ..---.++..+..+++++.+-+.+... ...-|++.. ..+|+. . ...| -+....... .-+.
T Consensus 267 ~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p--~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~-~~~g 343 (630)
T 3ogz_A 267 VFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP--KEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALN-KDGG 343 (630)
T ss_dssp EEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS--SCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC------
T ss_pred EEEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC--CcceeeEEEEecCCCceeeeeEEEeccCCHhHhhcc-CCCc
Confidence 999999943 333345788889999998887766432 233455443 245665 2 2333 111100000 0000
Q ss_pred cccCCCccccccCCceeeeEEEEEeHHHHHHHHHh
Q 010554 290 SLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRW 324 (507)
Q Consensus 290 ~~~~~~~~~~~~~~~l~~~Giyif~~~iL~~ll~~ 324 (507)
..+.- .........|+..+.|+-+.+.+.++.
T Consensus 344 ~~~~~---~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 344 DEVSD---PTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp ----------CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred ccccc---ccccccccccceeeeEEHHHHHHHHHh
Confidence 00000 000122345899999999866666653
No 163
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=97.47 E-value=0.00018 Score=68.18 Aligned_cols=9 Identities=33% Similarity=0.530 Sum_probs=3.6
Q ss_pred EEcCCcEEc
Q 010554 408 IISHGCFLR 416 (507)
Q Consensus 408 iIg~gc~I~ 416 (507)
.||++|.|+
T Consensus 67 ~IG~~~~I~ 75 (219)
T 4e8l_A 67 IIGRFCSIG 75 (219)
T ss_dssp EECSSCEEC
T ss_pred EECCCCEEc
Confidence 344444443
No 164
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.32 E-value=0.00036 Score=65.64 Aligned_cols=14 Identities=21% Similarity=0.282 Sum_probs=8.3
Q ss_pred eEEcCCcEEc-cceE
Q 010554 407 AIISHGCFLR-ECTV 420 (507)
Q Consensus 407 siIg~gc~I~-~~~I 420 (507)
++||++|.|+ +++|
T Consensus 61 v~IG~~~~Ig~gv~I 75 (209)
T 1mr7_A 61 LKIGKFCSIGPGVTI 75 (209)
T ss_dssp EEECSSCEECTTCEE
T ss_pred EEECCCCEEcCCCEE
Confidence 5666666666 4444
No 165
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=97.30 E-value=0.00018 Score=68.15 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=12.8
Q ss_pred CeEEcCCeEEEcCCCEeCCCccC
Q 010554 485 GFYIRSGITIIMEKATIEDGMVI 507 (507)
Q Consensus 485 ~~~i~~g~~vig~~~~i~~gt~i 507 (507)
+..|..| ++||++++|++|++|
T Consensus 131 ~a~I~~g-v~IG~gavIgagsvV 152 (220)
T 4hur_A 131 DVTIMPG-VKIGDGAIIAAEAVV 152 (220)
T ss_dssp TCEECTT-CEECTTCEECTTCEE
T ss_pred CCEEeCC-CEECCCCEEcCCCEE
Confidence 3445555 556666666666653
No 166
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=97.26 E-value=0.0004 Score=65.31 Aligned_cols=11 Identities=9% Similarity=0.398 Sum_probs=7.5
Q ss_pred ceEEcCCcEEc
Q 010554 406 DAIISHGCFLR 416 (507)
Q Consensus 406 ~siIg~gc~I~ 416 (507)
+..||++|.|+
T Consensus 24 ~v~IG~~t~I~ 34 (212)
T 3eev_A 24 NIIVGKHSYYS 34 (212)
T ss_dssp TEEECSSCEEC
T ss_pred CeEECCCeEEc
Confidence 56677777765
No 167
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.06 E-value=0.00088 Score=63.07 Aligned_cols=16 Identities=13% Similarity=0.268 Sum_probs=10.6
Q ss_pred eceEEcCCcEEc-cceE
Q 010554 405 KDAIISHGCFLR-ECTV 420 (507)
Q Consensus 405 ~~siIg~gc~I~-~~~I 420 (507)
....||++|.|+ +++|
T Consensus 55 ~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred cCEEEcCCCEECCCCEE
Confidence 356777777777 4554
No 168
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=96.65 E-value=0.0038 Score=58.69 Aligned_cols=14 Identities=21% Similarity=0.112 Sum_probs=7.9
Q ss_pred eeee-ceEEcCCcEE
Q 010554 402 CRIK-DAIISHGCFL 415 (507)
Q Consensus 402 ~~I~-~siIg~gc~I 415 (507)
..|. ++.|++||+|
T Consensus 57 i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 57 LVIGSFCSIGSGAAF 71 (212)
T ss_dssp EEECSSCEECTTCEE
T ss_pred EEEcCCCEECCCCEE
Confidence 4443 5666666665
No 169
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.43 E-value=0.006 Score=56.88 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=69.7
Q ss_pred CceEEEEEc--CCCCCcccCCccCCCccceeecCcchhhHHHHHHHHhcCCCEE-EEEeccCchHHHHHHHhcccCCCcc
Q 010554 93 KNVAAIILG--GGAGTKLFPLTLRAATPAVPVAGCYRLIDIPMSNCINSGINKI-FVLTQFNSASLNRHIARTYFGNGTN 169 (507)
Q Consensus 93 ~~~~aVILA--aG~GtRL~PLT~~~PK~LlPI~g~ypLId~~L~~l~~~Gi~~I-~Vv~~~~~~~l~~~l~~~~~~~~~~ 169 (507)
+.|.+||++ +..-|||.|. .....-...++ |||+|+++.+..++++.+ ++++++... +.+
T Consensus 2 ~~~~~vip~k~g~~KtRL~~~---l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~~-------~~~------ 64 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSPV---LSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYGL-------EEM------ 64 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTTT---SCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTTC-------SSC------
T ss_pred CceEEEEEeCCCCCccccCcc---CCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHHH-------Hhh------
Confidence 468899999 7778888631 11222225578 999999999999999999 888876421 111
Q ss_pred cCCCeEEEecCccCCCCCCCCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee--ccCCHHHHHH
Q 010554 170 FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL--YRMDYMDFIQ 235 (507)
Q Consensus 170 ~~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i--~~~dl~~ll~ 235 (507)
++ ++++. +. .|.+++++.+...+ .+.++++.||+- ....+..+++
T Consensus 65 ~~---~~~v~--~~---------~gl~~sl~~a~~~~-------~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 65 TE---ARVLL--DE---------KDLNEALNRYLKEA-------EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp CS---SEEEE--CC---------SCHHHHHHHHHHHC-------CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred cC---CEEEE--CC---------CCHHHHHHHHHHhc-------CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 12 34442 21 28999999886443 368999999993 3344555554
No 170
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=95.81 E-value=0.014 Score=54.57 Aligned_cols=12 Identities=0% Similarity=0.130 Sum_probs=8.8
Q ss_pred ceEEcCCcEEcc
Q 010554 406 DAIISHGCFLRE 417 (507)
Q Consensus 406 ~siIg~gc~I~~ 417 (507)
+..||++|+|+.
T Consensus 29 ~i~IG~~~~I~~ 40 (209)
T 1mr7_A 29 NVEVGEYSYYDS 40 (209)
T ss_dssp TEEECTTCEEEC
T ss_pred CeEECCCcEEcC
Confidence 567888888863
No 171
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=95.58 E-value=0.022 Score=53.75 Aligned_cols=12 Identities=0% Similarity=0.257 Sum_probs=8.5
Q ss_pred ceEEcCCcEEcc
Q 010554 406 DAIISHGCFLRE 417 (507)
Q Consensus 406 ~siIg~gc~I~~ 417 (507)
+..||++++|++
T Consensus 34 ~i~IG~~t~i~~ 45 (219)
T 4e8l_A 34 NILVGEYSYYDS 45 (219)
T ss_dssp SEEECTTCEEEC
T ss_pred CEEECCccEEcC
Confidence 567777777763
No 172
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=83.41 E-value=11 Score=34.32 Aligned_cols=107 Identities=16% Similarity=0.185 Sum_probs=65.8
Q ss_pred cceeecCcchhhHHHHHHHHhcCCC--EEEEEeccCchHHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcccCh
Q 010554 118 PAVPVAGCYRLIDIPMSNCINSGIN--KIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGT 195 (507)
Q Consensus 118 ~LlPI~g~ypLId~~L~~l~~~Gi~--~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~~Gt 195 (507)
-.+|.-|....|..+|+.+.+.... +|+|+-....+...+.+. .+.. ++ ..+.++.. +. .|.
T Consensus 9 ViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~-~~~~---~~--~~i~~i~~-~n---------~G~ 72 (240)
T 3bcv_A 9 VIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICD-DYAA---QY--PNIKVIHK-KN---------AGL 72 (240)
T ss_dssp EEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHH-HHHH---HC--SSEEEEEC-CC---------CCH
T ss_pred EEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHH-HHHh---hC--CCEEEEEC-CC---------CCh
Confidence 3566667657889999998876443 566665433332222221 1110 01 12666642 11 488
Q ss_pred HHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHcCCceEE
Q 010554 196 ADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDADITI 246 (507)
Q Consensus 196 a~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~~a~~tl 246 (507)
+.|...+....+ .+.++++.+|.+...+ +..+++...+.+.++.+
T Consensus 73 ~~a~N~g~~~a~------g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 73 GMACNSGLDVAT------GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp HHHHHHHHHHCC------SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHcC------CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 888887765542 5889999999988777 57777777766666543
No 173
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=77.30 E-value=43 Score=30.50 Aligned_cols=111 Identities=11% Similarity=0.148 Sum_probs=66.3
Q ss_pred ceeecCcchhhHHHHHHHHhcCCC--EEEEEeccCchHHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcccChH
Q 010554 119 AVPVAGCYRLIDIPMSNCINSGIN--KIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGTA 196 (507)
Q Consensus 119 LlPI~g~ypLId~~L~~l~~~Gi~--~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~~Gta 196 (507)
.+|.-|....|..+|+.+.+.... +|+|+-....+...+.+ +.+.. ...+.++........ ....-.|.+
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~-~~~~~------~~~i~~i~~~~~~~~-~~~~n~G~~ 77 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVI-RPFLN------DNRVRFYQSDISGVK-ERTEKTRYA 77 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHH-GGGGG------STTEEEEECCCCSHH-HHHSSCHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHH-HHHhh------cCCEEEEeccccccc-ccccccCHH
Confidence 567777767899999999876443 56666655555444444 33311 123666643300000 000014888
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHc-CCc
Q 010554 197 DAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDR-DAD 243 (507)
Q Consensus 197 ~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~-~a~ 243 (507)
.|...+.... ..+.++++.+|.+...+ +..+++.+.+. +.+
T Consensus 78 ~a~N~gi~~a------~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~ 120 (255)
T 1qg8_A 78 ALINQAIEMA------EGEYITYATDDNIYMPDRLLKMVRELDTHPEKA 120 (255)
T ss_dssp HHHHHHHHHC------CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHc------CCCEEEEeCCCCccChHHHHHHHHHHHhCCCce
Confidence 8887776544 35889999999988777 57777777654 443
No 174
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=72.93 E-value=15 Score=34.42 Aligned_cols=88 Identities=6% Similarity=-0.068 Sum_probs=57.0
Q ss_pred hhhHHHHHHHHhcCCCEEEEEeccCchHHH--HHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcccChHHHHHHHHH
Q 010554 127 RLIDIPMSNCINSGINKIFVLTQFNSASLN--RHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTW 204 (507)
Q Consensus 127 pLId~~L~~l~~~Gi~~I~Vv~~~~~~~l~--~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~~Gta~AL~~~~~ 204 (507)
+|+.++++.+...+...++++++.....+. ..+. +. . +.+. .|. ..|.+.+++.+..
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~----~~------~-~~~~--~q~--------~~gLg~rl~~a~~ 96 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL----GP------Q-HMFA--AQQ--------GLDLGERMKHAMQ 96 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH----CT------T-SEEE--ECC--------SSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc----cC------C-cEEe--cCC--------CCCHHHHHHHHHH
Confidence 799999999999988877777776554432 2221 11 1 1222 132 1489999998865
Q ss_pred HHHhhhcCCCCeEEEEcCce--eccCCHHHHHHHHH
Q 010554 205 VFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHV 238 (507)
Q Consensus 205 ~l~~~~~~~~~~~lVl~gD~--i~~~dl~~ll~~h~ 238 (507)
.+-+ ...+.++++.+|+ |...++.++++.+.
T Consensus 97 ~~~~---~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 97 KAFD---DGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp HHHH---TTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred HHHh---CCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 5421 2347899999999 55666777776554
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=61.84 E-value=1.3e+02 Score=30.45 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=64.0
Q ss_pred ceeecCcc-hhhHHHHHHHHhcCC----CEEEEEeccCch-HHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcc
Q 010554 119 AVPVAGCY-RLIDIPMSNCINSGI----NKIFVLTQFNSA-SLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWF 192 (507)
Q Consensus 119 LlPI~g~y-pLId~~L~~l~~~Gi----~~I~Vv~~~~~~-~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~ 192 (507)
.+|.-|.. ..|..+|+.+.+.-. .+|+||-....+ ...+.+. .+.. ++. ..++++...+.
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~-~~~~---~~~-~~v~vi~~~~n--------- 99 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE-SYVK---KLK-VPVHVIRMEQR--------- 99 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH-HHHH---SSS-SCEEEEECSSC---------
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHH-HHHH---HCC-CcEEEEECCCC---------
Confidence 45666764 578888888877543 277777654333 2322332 1100 111 12677653332
Q ss_pred cChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHcCCc
Q 010554 193 QGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDAD 243 (507)
Q Consensus 193 ~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~~a~ 243 (507)
.|-+.|...+..... .+.++++.+|.....+ +..+++.+.+....
T Consensus 100 ~G~~~a~N~g~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 145 (472)
T 1xhb_A 100 SGLIRARLKGAAVSR------GQVITFLDAHCECTAGWLEPLLARIKHDRRT 145 (472)
T ss_dssp CCHHHHHHHHHHHCC------SSEEEEEESSEEECTTCHHHHHHHHHHCTTE
T ss_pred CChHHHHHHHHHhcc------CCeEEEECCCeEeCccHHHHHHHHHHhCCCE
Confidence 488888887765442 5789999999988766 78888877765543
No 176
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=52.66 E-value=1.2e+02 Score=30.99 Aligned_cols=100 Identities=7% Similarity=0.072 Sum_probs=61.6
Q ss_pred ceeecCcch-hhHHHHHHHHhcCC-C---EEEEEeccCch-HHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcc
Q 010554 119 AVPVAGCYR-LIDIPMSNCINSGI-N---KIFVLTQFNSA-SLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWF 192 (507)
Q Consensus 119 LlPI~g~yp-LId~~L~~l~~~Gi-~---~I~Vv~~~~~~-~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~ 192 (507)
.+|.-|... .|...|+.+.+.-. . +|+||-....+ .+...+. . +. .|.++.....
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~-~-------~~--~v~vi~~~~n--------- 131 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLG-K-------IE--KVRVLRNDRR--------- 131 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGG-G-------BT--TEEEEECSSC---------
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHh-c-------CC--CEEEEECCCC---------
Confidence 456666634 67888888776533 2 77777644332 3322221 1 11 2677653322
Q ss_pred cChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHcCCc
Q 010554 193 QGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDAD 243 (507)
Q Consensus 193 ~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~~a~ 243 (507)
.|-+.|+..+..... .+.++++.+|.....+ +..+++...+....
T Consensus 132 ~G~~~A~N~G~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 132 EGLMRSRVRGADAAQ------AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp CHHHHHHHHHHHHCC------SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred cCHHHHHHHHHHhcC------CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 488888887765442 5788889999988665 78888887766553
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=46.23 E-value=1.6e+02 Score=31.03 Aligned_cols=105 Identities=10% Similarity=0.001 Sum_probs=65.4
Q ss_pred cceeecCcchhhHHHHHHHHhcC---CCEEEEEeccCchHHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcccC
Q 010554 118 PAVPVAGCYRLIDIPMSNCINSG---INKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQG 194 (507)
Q Consensus 118 ~LlPI~g~ypLId~~L~~l~~~G---i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~~G 194 (507)
.++|.-|....|..+|+.+.... --+|+||-....+...+.+. .+ .. . ..+.++..... -.|
T Consensus 97 viIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~-~~-~~--~---~~i~~i~~~~~--------~~g 161 (625)
T 2z86_A 97 IVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVR-EF-ES--L---LNIKYVRQKDY--------GYQ 161 (625)
T ss_dssp EEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHH-TT-TT--T---SCEEEEEECCC--------SCC
T ss_pred EEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHH-Hh-hh--c---CCeEEEEeCCC--------Ccc
Confidence 45677777568889999998763 34677776655544444443 33 11 1 12555542211 025
Q ss_pred hHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHcCCc
Q 010554 195 TADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDAD 243 (507)
Q Consensus 195 ta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~~a~ 243 (507)
-+.|+..+.... ..+.++++.+|.+...+ +..+++.+.+....
T Consensus 162 ~~~a~N~g~~~a------~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 162 LCAVRNLGLRAA------KYNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp HHHHHHHHHHHC------CSSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred hhHHHHHHHHhC------CcCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 778887776544 25789999999998777 57777776655543
No 178
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=46.02 E-value=1.4e+02 Score=31.27 Aligned_cols=103 Identities=11% Similarity=0.128 Sum_probs=63.2
Q ss_pred cceeecCcc-hhhHHHHHHHHhcCC-C---EEEEEeccCchHH-HHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCc
Q 010554 118 PAVPVAGCY-RLIDIPMSNCINSGI-N---KIFVLTQFNSASL-NRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNW 191 (507)
Q Consensus 118 ~LlPI~g~y-pLId~~L~~l~~~Gi-~---~I~Vv~~~~~~~l-~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~ 191 (507)
-.+|.-|.. ..|..+|+.+.+.-. . +|+||-....+.. .+.+. .+.. .+ ..|+++...+.
T Consensus 116 VIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~-~~~~---~~--~~v~vi~~~~n-------- 181 (570)
T 2d7i_A 116 IIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLE-DYMA---LF--PSVRILRTKKR-------- 181 (570)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHH-HHHT---TS--TTEEEEECSSC--------
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHH-HHHH---hC--CeEEEEECCCC--------
Confidence 346777874 578888888876533 2 7777765432222 33332 2211 11 13677653322
Q ss_pred ccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHcC
Q 010554 192 FQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRD 241 (507)
Q Consensus 192 ~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~~ 241 (507)
.|-+.|...+..... .+.++++.+|.....+ |..+++...+..
T Consensus 182 -~G~~~A~N~G~~~A~------gd~i~fLD~D~~~~p~~L~~ll~~l~~~~ 225 (570)
T 2d7i_A 182 -EGLIRTRMLGASVAT------GDVITFLDSHCEANVNWLPPLLDRIARNR 225 (570)
T ss_dssp -CCHHHHHHHHHHHCC------SSEEEECCSSEEECTTCSHHHHHHHHHCT
T ss_pred -CCHHHHHHHHHHhcC------CCEEEEEcCCccccccHHHHHHHHHHhCC
Confidence 488888887765442 5788999999988766 677887776644
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=45.19 E-value=1.5e+02 Score=31.34 Aligned_cols=101 Identities=13% Similarity=0.154 Sum_probs=62.5
Q ss_pred cceeecCcchhhHHHHHHHHhcCCC--EEEEEeccCchHHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcccCh
Q 010554 118 PAVPVAGCYRLIDIPMSNCINSGIN--KIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGT 195 (507)
Q Consensus 118 ~LlPI~g~ypLId~~L~~l~~~Gi~--~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~~Gt 195 (507)
.++|.-|....|..+|+.+.+.... +|+|+-+...+...+.+. .+... . ..+.++.. .. .|-
T Consensus 379 iii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~-~~~~~---~--~~i~~~~~-~n---------~G~ 442 (625)
T 2z86_A 379 IYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQ-EHYAN---H--PRVRFISQ-KN---------KGI 442 (625)
T ss_dssp EEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHH-HHHTT---C--TTEEEEEE-CC---------CCH
T ss_pred EEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHH-HHHhh---C--CcEEEEeC-CC---------CCH
Confidence 3566667667899999998875432 666665544333333333 22111 1 12666642 11 488
Q ss_pred HHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHc
Q 010554 196 ADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDR 240 (507)
Q Consensus 196 a~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~ 240 (507)
+.|+..+.... ..+.++++.+|.+...+ +..+++.+.+.
T Consensus 443 ~~a~n~g~~~a------~g~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 443 GSASNTAVRLC------RGFYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp HHHHHHHHHHC------CSSEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHhc------CCCEEEEECCCcccChhHHHHHHHHHHhC
Confidence 88888776544 25789999999988777 56777766544
No 180
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=39.94 E-value=2e+02 Score=27.47 Aligned_cols=110 Identities=11% Similarity=0.054 Sum_probs=61.4
Q ss_pred ceeecCcchhhHHHHHHHHhc--C-CCEEEEEeccCchHHHHHHHhcccCCCcccCCCeEEEecCccCCCCCCCCcccCh
Q 010554 119 AVPVAGCYRLIDIPMSNCINS--G-INKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGT 195 (507)
Q Consensus 119 LlPI~g~ypLId~~L~~l~~~--G-i~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~~~~~~Gt 195 (507)
.+|.-|....|..+|+.+.+. . ..+|+||-....+...+.+. .+ .. +.. ..+.++...+. -.|-
T Consensus 53 iIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~-~~-~~--~~~-~~~~~~~~~~~--------n~G~ 119 (329)
T 3ckj_A 53 VLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAV-AA-GA--RVV-SREQALPEVPI--------RPGK 119 (329)
T ss_dssp EEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHH-HT-TC--EEE-EHHHHCTTSCC--------CCSH
T ss_pred EEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHH-Hh-hh--hhc-cceeeeccCCC--------CCCH
Confidence 355556546777888888765 2 35787776544444434443 22 10 000 00111110111 1588
Q ss_pred HHHHHHHHHHHHhhhcCCCCeEEEEcCcee-ccCC-HHHHHHHHHH-cCCceEEE
Q 010554 196 ADAVRQFTWVFEDAKNRNIENVAILCGDHL-YRMD-YMDFIQSHVD-RDADITIS 247 (507)
Q Consensus 196 a~AL~~~~~~l~~~~~~~~~~~lVl~gD~i-~~~d-l~~ll~~h~~-~~a~~tl~ 247 (507)
+.|+..+.... ..+.++++.+|.+ ...+ +..+++...+ .+.++...
T Consensus 120 ~~a~n~g~~~a------~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g 168 (329)
T 3ckj_A 120 GEALWRSLAAS------RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKS 168 (329)
T ss_dssp HHHHHHHHHHC------CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEE
T ss_pred HHHHHHHHHhC------CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEE
Confidence 99998876544 2578999999998 7766 5777776443 35554444
No 181
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=24.98 E-value=1.8e+02 Score=28.90 Aligned_cols=109 Identities=14% Similarity=0.095 Sum_probs=63.1
Q ss_pred cceeecCcchhhHHHHHHHHh----c-CCCEEEEEeccCchHHHHHHHhcccCCCcccCCCeEEEecCc----cCCCCCC
Q 010554 118 PAVPVAGCYRLIDIPMSNCIN----S-GINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAAT----QTPGESG 188 (507)
Q Consensus 118 ~LlPI~g~ypLId~~L~~l~~----~-Gi~~I~Vv~~~~~~~l~~~l~~~~~~~~~~~~~~~V~vl~~~----q~~~~~~ 188 (507)
..+|.-|....|..+|+.+.+ . ...+|+||-....+.-.+.+. .+ + .+++... ...
T Consensus 98 VVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~-~~-------~---~~v~~~~~~~i~~~---- 162 (387)
T 3f1y_A 98 AVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAA-SH-------G---AEVYSENELMSGYG---- 162 (387)
T ss_dssp EEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHH-HT-------T---CEEEEGGGTTGGGC----
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHH-Hh-------C---chhcccceeEecCC----
Confidence 356777765567777777654 2 345787776654444433332 22 1 1121100 011
Q ss_pred CCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCcee-ccCC-HHHHHHHHHHc-CCceEEEEE
Q 010554 189 KNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL-YRMD-YMDFIQSHVDR-DADITISCA 249 (507)
Q Consensus 189 ~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i-~~~d-l~~ll~~h~~~-~a~~tl~~~ 249 (507)
...|-+.|+..+.... ..+.++++.+|.. ...+ +..+++...+. +++++....
T Consensus 163 --~n~G~g~A~n~G~~~A------~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 163 --DAHGKGDAMWRALSVT------RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp --SCCSHHHHHHHHTTTC------CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred --ccCCHHHHHHHHHHhc------CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 0158999998875333 2577888899998 6655 67777776654 677666544
No 182
>1l0s_A Thermal hysteresis protein; LEFT-handed beta-helix, antifreeze protein, iodination; HET: TYI; 2.30A {Choristoneura fumiferana} SCOP: b.81.2.1 PDB: 1eww_A 1n4i_A
Probab=24.53 E-value=81 Score=24.04 Aligned_cols=15 Identities=47% Similarity=0.784 Sum_probs=8.8
Q ss_pred CCCcEEeeeEeCCCC
Q 010554 448 GRNTKIRNCIIDKNV 462 (507)
Q Consensus 448 g~~~~I~nsIIg~na 462 (507)
|.+|.|..|.|-.++
T Consensus 59 Gp~csis~ctit~gv 73 (90)
T 1l0s_A 59 GPGCKISTCIITGGV 73 (90)
T ss_dssp EEEEEEESCEEETTE
T ss_pred CCCceeEEEEEeCCc
Confidence 556666666665554
No 183
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=24.10 E-value=3.5e+02 Score=29.05 Aligned_cols=107 Identities=11% Similarity=0.077 Sum_probs=63.7
Q ss_pred ceeecCcchhhHHHHHHHHhc-----CCCEEEEEeccCch-----HHHHHHHhcccCCCcccCCCeEEEecCccCCCCCC
Q 010554 119 AVPVAGCYRLIDIPMSNCINS-----GINKIFVLTQFNSA-----SLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESG 188 (507)
Q Consensus 119 LlPI~g~ypLId~~L~~l~~~-----Gi~~I~Vv~~~~~~-----~l~~~l~~~~~~~~~~~~~~~V~vl~~~q~~~~~~ 188 (507)
.+|.-|+...|..+|+.+.+. ...+|+||=+...+ .+.+.+.+.. ..+.++... .
T Consensus 185 VIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~---------~~I~vI~~~-N----- 249 (657)
T 4fix_A 185 GIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG---------SRLSIHDQP-N----- 249 (657)
T ss_dssp ECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG---------GGEEEEECC-C-----
T ss_pred EEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC---------CCEEEEECC-C-----
Confidence 355567657888888888764 33477777554321 3333332211 126666432 1
Q ss_pred CCcccChHHHHHHHHHHHHhhhcCCCCeEEEEcCceeccCC-HHHHHHHHHHcCCceEE
Q 010554 189 KNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDADITI 246 (507)
Q Consensus 189 ~~~~~Gta~AL~~~~~~l~~~~~~~~~~~lVl~gD~i~~~d-l~~ll~~h~~~~a~~tl 246 (507)
.|-+.+...++..... ....+.+++++.|.+...+ +..+++.+........+
T Consensus 250 ----~G~a~a~N~Gl~~A~g--~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~v 302 (657)
T 4fix_A 250 ----LGGSGGYSRVMYEALK--NTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLV 302 (657)
T ss_dssp ----CHHHHHHHHHHHHHHH--HCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEE
T ss_pred ----CCHHHHHHHHHHHHHh--cCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEE
Confidence 4778777766554431 0134789999999988776 57788777665443333
Done!