Query 010560
Match_columns 507
No_of_seqs 189 out of 1157
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 01:57:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010560.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010560hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2493 Na+/Pi symporter [Inor 100.0 1.9E-87 4.2E-92 698.0 13.3 399 15-501 99-508 (512)
2 PF01384 PHO4: Phosphate trans 100.0 8.6E-62 1.9E-66 499.9 20.9 258 16-491 60-326 (326)
3 COG0306 PitA Phosphate/sulphat 100.0 4.4E-56 9.6E-61 454.4 21.0 154 330-499 170-323 (326)
4 COG0306 PitA Phosphate/sulphat 99.8 2.4E-20 5.2E-25 191.7 10.5 145 336-498 6-157 (326)
5 PF01384 PHO4: Phosphate trans 99.8 5.2E-19 1.1E-23 182.8 10.2 132 350-499 2-145 (326)
6 KOG2493 Na+/Pi symporter [Inor 99.7 6E-17 1.3E-21 170.7 10.8 144 338-500 31-185 (512)
7 COG3275 LytS Putative regulato 63.8 11 0.00025 41.6 5.2 88 1-98 22-123 (557)
8 PF14342 DUF4396: Domain of un 53.0 61 0.0013 30.1 7.4 64 37-118 8-74 (139)
9 TIGR03113 exosortase_2 exosort 42.4 78 0.0017 32.5 7.0 52 402-453 100-162 (268)
10 PF14150 YesK: YesK-like prote 35.3 1.7E+02 0.0037 24.9 6.8 33 104-136 17-50 (81)
11 PF06570 DUF1129: Protein of u 31.9 3.3E+02 0.0071 26.4 9.3 22 86-107 115-136 (206)
12 PRK10650 multidrug efflux syst 25.4 1.1E+02 0.0024 27.1 4.3 85 386-476 7-96 (109)
13 PRK09541 emrE multidrug efflux 22.3 1.5E+02 0.0032 26.3 4.5 82 389-476 4-91 (110)
14 PF14147 Spore_YhaL: Sporulati 22.1 78 0.0017 24.7 2.2 25 386-415 1-25 (52)
15 PF11045 YbjM: Putative inner 21.9 3.4E+02 0.0074 25.0 6.7 14 153-166 98-111 (125)
16 COG1283 NptA Na+/phosphate sym 21.7 3.5E+02 0.0075 30.7 8.1 104 388-498 6-125 (533)
17 PF00893 Multi_Drug_Res: Small 20.4 1.9E+02 0.004 24.5 4.6 60 389-454 4-63 (93)
No 1
>KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-87 Score=698.01 Aligned_cols=399 Identities=23% Similarity=0.437 Sum_probs=308.7
Q ss_pred CCChhHHHH---------HHHHHHHhhcCCCCcchhhhhHHHHHHHHHhccCcccccccccCCCCcCCCCceeeeeehhh
Q 010560 15 QPSEGFLMW---------TIWLVIATYFELPVSPQQATQAALLGSMLVTEGFDYIPLWNKNDNHNFNGGGLLWIFLEWTV 85 (507)
Q Consensus 15 ~~~p~~lMl---------aiWL~~AT~~~lPVStTHsivGaiiG~~lva~G~~~V~~W~~~~~~~~~~~g~~~I~~sW~i 85 (507)
+++|..||+ +.|+++||.+++||||||||||+.+||+++++|.+++ .|. ++.+|++|||+
T Consensus 99 ~~~~~~lmlgqva~L~G~a~W~l~At~~~~PvSttHsiVgatigfs~~~~g~~Gi-~w~----------~v~~iv~swfi 167 (512)
T KOG2493|consen 99 NDTPKTLMLGQVAALFGSAAWLLVATFLKLPVSTTHSIVGATIGFSLVARGFNGI-VWM----------EVIKIVASWFI 167 (512)
T ss_pred cCCHHHHHHHHHHHHHhHHHHHHHHHHHcCCccceeeeeeheeeeeeeeccccce-eeh----------hhHHHHHHHhh
Confidence 578999998 9999999999999999999999999999999999999 795 46799999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cccccchHHHHHHHHHHHHHHHH
Q 010560 86 APLFACMCACFLFILLKVLILRHKNARERILIFFPVDYGLSAGLLCLFLVYRVRG--HLVHIPRWVTIAAVALATFIGAV 163 (507)
Q Consensus 86 sP~lsg~~~~~lf~lir~~IL~r~np~~~al~~lPi~~~it~~i~~~~Iv~kg~~--~~~~~~~w~~~~~~~v~~~i~~~ 163 (507)
||+++|+++.++|.++|+.|||++||++++++.+|++|++|.++|+|.++|+|++ +++++|.|....++.+...++++
T Consensus 168 Spilsg~~s~ilf~~v~~svl~~~~p~~~gl~~lp~~y~~~~~~n~f~ivy~Gs~~l~~d~l~~~~~~~is~~~g~i~a~ 247 (512)
T KOG2493|consen 168 SPILSGIISAILFFLVDHSVLRAANPVKNGLRLLPVFYFITVSINVFGIVYDGSKVLGLDSLPLWATILISVGLGVIAAF 247 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCchhhchhhcchhhhhhhhheeeeEEecCcceeeeccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 45688999877777777777888
Q ss_pred HhhhhhhhheeeeccccchhhhcccCCCCCchhhhhhhhcccccCCCCCCCchhHHHHHHHHHhhcccchhhhhhhccCC
Q 010560 164 LPLVVIVPLATKELGATEKHKTAKNNNMNSTKEQCVEIQDQTCSNNTKGRDDEAEDVLREFMQRRVLDTVYEEEERNSCA 243 (507)
Q Consensus 164 l~~~~~vP~i~~ki~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (507)
+.++++.|++|||+.+.+..+ ++++..+. +.....++..+..+.++ . +.
T Consensus 248 i~~f~v~p~~~~ki~~~k~~~-----~~~~~~~~-----~~~s~~~~~~~~~~i~~-----------------~-~~--- 296 (512)
T KOG2493|consen 248 IVYFFVRPFMRRKINRGKETD-----EAPPVSEV-----SGSSARRELGKSVEIKE-----------------E-SA--- 296 (512)
T ss_pred HHHHHhhHHHHhhcccccccc-----cCCCccch-----hccccccccccccchhc-----------------c-cc---
Confidence 999999999999876311100 01111110 00000000000000000 0 00
Q ss_pred CCCCCCCcchhhhhhccCccchhhhccccCCCccccccccccccCCCCccchhhhhhcccccccCccchhhhhhHHHhhh
Q 010560 244 SPDSTIKDSDQQLALSTGQSTQFKHLLQCTPNNLVQTKTFHKTENQSPFQSAYNFVRNFTKSTVSPVIEYDRNTLIRHAL 323 (507)
Q Consensus 244 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (507)
.+...+..+.+ . ... + ...+.. .+++.+....++.+. + +..+
T Consensus 297 -~e~~~~~~~~~--~---t~~--~---~~~P~~---------~~~qgk~~~~~~~l~--------p----~~~r------ 338 (512)
T KOG2493|consen 297 -VESTVKNLRIQ--N---TSA--I---TKSPST---------SESQGKIRKLEKWLW--------P----DVTR------ 338 (512)
T ss_pred -ccccccchhhc--c---hhh--c---cCCCCC---------ccccCccchhheeec--------C----CCCc------
Confidence 00000000000 0 000 0 000000 000000000000000 0 0000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhccccCCCCCcccccchhHHHHHHHHHHHHHHHH
Q 010560 324 AEKYDEIEDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFI 403 (507)
Q Consensus 324 ~~~~~~~e~~f~~lqv~sa~~~aFahGaNDvanaigp~~~i~~~~~~g~~~~~~~~~~~~~~vp~wil~~gg~~i~~G~~ 403 (507)
-+.++++++|+++|++||||++||||||||+||+||++++|.+|++|.. .++..+|+|+|++|+++|++|+|
T Consensus 339 -~d~e~v~~lFs~lQvlTACF~sFAHGaNDVsNAIgPL~Al~~iy~~g~v-------~~k~~~Pi~vLlyG~~aicvGlw 410 (512)
T KOG2493|consen 339 -VDSEEVSRLFSTLQVLTACFASFAHGANDVSNAIGPLVALYLIYRTGYV-------EQKEETPIYVLLYGGFAICVGLW 410 (512)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhhcccccchhhhhHHHHHHHHHHHcCCc-------cceeccceeeeecccceeeeeeh
Confidence 0223789999999999999999999999999999999999999999743 34778999999999999999999
Q ss_pred hhhhHHHHHHhccceeccCCchHHHHHHHHHHHHHHhhcCCcccccccchhceeeeeecCCCcccchHHHHHHhHHhhhh
Q 010560 404 LCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMT 483 (507)
Q Consensus 404 ~~G~rVi~TvG~~it~l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG~~~~~~~V~w~~~~~I~~~WiiT 483 (507)
++|+|||||+|+|+|+++|+||||+|+++|+|+++||++|||+|||||.||||++||++|+.++|+|+++|+|+++|++|
T Consensus 411 ~~G~rVIkTvG~kmt~itPasGFsIEfgaA~TvLiAsklGlPiStThc~VGsVvaVG~~rs~~~V~w~~fR~I~~sW~vT 490 (512)
T KOG2493|consen 411 TLGHRVIKTVGKKMTEITPASGFSIEFGAAITVLIASKLGLPISTTHCLVGSVVAVGLARSLKGVDWRTFRNIFFSWFVT 490 (512)
T ss_pred hhhHHHHHHHhhcccccCCCccceeeHHHHHHHHHHHhcCCCcccceeeeeeEEEEEEeccCCCcchHHHHHhHhhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 010560 484 IIFCCGAAFAIFYASVHA 501 (507)
Q Consensus 484 ~p~a~~~s~~l~~~~~~a 501 (507)
+|+++++|++.+.+.-++
T Consensus 491 lPvsglisa~~m~Il~~~ 508 (512)
T KOG2493|consen 491 LPVSGLISAGIMWILQYA 508 (512)
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 999999999998887654
No 2
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=100.00 E-value=8.6e-62 Score=499.85 Aligned_cols=258 Identities=36% Similarity=0.706 Sum_probs=237.0
Q ss_pred CChhHHHH---------HHHHHHHhhcCCCCcchhhhhHHHHHHHHHhccCcccccccccCCCCcCCCCceeeeeehhhh
Q 010560 16 PSEGFLMW---------TIWLVIATYFELPVSPQQATQAALLGSMLVTEGFDYIPLWNKNDNHNFNGGGLLWIFLEWTVA 86 (507)
Q Consensus 16 ~~p~~lMl---------aiWL~~AT~~~lPVStTHsivGaiiG~~lva~G~~~V~~W~~~~~~~~~~~g~~~I~~sW~is 86 (507)
+||+.+|+ ++|++++|++|+|+||||+++|+++|++++.+|.+++ +|.+ ++.+|+++|++|
T Consensus 60 ~~~~~~~~~~~~al~~a~iw~~i~t~~glPvStThalvGal~G~~l~~~g~~~v-~w~~---------~~~~I~~~wv~s 129 (326)
T PF01384_consen 60 DDPQILMIGMLAALLAAAIWLLIATWLGLPVSTTHALVGALIGAGLASGGFSAV-NWSK---------GLLKIVLSWVIS 129 (326)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhhhhc-hHHH---------HHHHHHHHHHHH
Confidence 56666654 9999999999999999999999999999999999999 7862 367899999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHHHHhh
Q 010560 87 PLFACMCACFLFILLKVLILRHKNARERILIFFPVDYGLSAGLLCLFLVYRVRGHLVHIPRWVTIAAVALATFIGAVLPL 166 (507)
Q Consensus 87 P~lsg~~~~~lf~lir~~IL~r~np~~~al~~lPi~~~it~~i~~~~Iv~kg~~~~~~~~~w~~~~~~~v~~~i~~~l~~ 166 (507)
|++++++++++|.++|+.+++++||.+++++..|+++
T Consensus 130 Plia~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 166 (326)
T PF01384_consen 130 PLIAFILAYILYRLIRRIFLRRKNPVKRALRPLPILF------------------------------------------- 166 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhccccch-------------------------------------------
Confidence 9999999999999999999999999999988887776
Q ss_pred hhhhhheeeeccccchhhhcccCCCCCchhhhhhhhcccccCCCCCCCchhHHHHHHHHHhhcccchhhhhhhccCCCCC
Q 010560 167 VVIVPLATKELGATEKHKTAKNNNMNSTKEQCVEIQDQTCSNNTKGRDDEAEDVLREFMQRRVLDTVYEEEERNSCASPD 246 (507)
Q Consensus 167 ~~~vP~i~~ki~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 246 (507)
. +
T Consensus 167 -~------~----------------------------------------------------------------------- 168 (326)
T PF01384_consen 167 -F------D----------------------------------------------------------------------- 168 (326)
T ss_pred -h------h-----------------------------------------------------------------------
Confidence 0 0
Q ss_pred CCCCcchhhhhhccCccchhhhccccCCCccccccccccccCCCCccchhhhhhcccccccCccchhhhhhHHHhhhhhh
Q 010560 247 STIKDSDQQLALSTGQSTQFKHLLQCTPNNLVQTKTFHKTENQSPFQSAYNFVRNFTKSTVSPVIEYDRNTLIRHALAEK 326 (507)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (507)
T Consensus 169 -------------------------------------------------------------------------------- 168 (326)
T PF01384_consen 169 -------------------------------------------------------------------------------- 168 (326)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhccccCCCCCcccccchhHHHHHHHHHHHHHHHHhhh
Q 010560 327 YDEIEDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCG 406 (507)
Q Consensus 327 ~~~~e~~f~~lqv~sa~~~aFahGaNDvanaigp~~~i~~~~~~g~~~~~~~~~~~~~~vp~wil~~gg~~i~~G~~~~G 406 (507)
++.|+.|+++|++++|++||+||+||++|++||+++++.+|++|.. ..++.++|+|++++|++++++|++++|
T Consensus 169 -~~~~~~~~~l~i~sa~~~sfahGaND~~naig~~~~~~~~~~~g~~------~~~~~~~p~~~~~~~~~~i~~G~~~~G 241 (326)
T PF01384_consen 169 -PRVEKIFRFLQILSAAFVSFAHGANDVANAIGPLAAILIIYNTGSV------NSGKAEIPWWILLLGGLAIALGTLTGG 241 (326)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCc------ccccccChHHHHHHHHHHHHHHHHHhh
Confidence 0236789999999999999999999999999999999999988632 123457899999999999999999999
Q ss_pred hHHHHHHhccceeccCCchHHHHHHHHHHHHHHhhcCCcccccccchhceeeeeecCCCcccchHHHHHHhHHhhhhHHH
Q 010560 407 WKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIF 486 (507)
Q Consensus 407 ~rVi~TvG~~it~l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~ 486 (507)
||||||+|+||++++|.|||++|+++|++++++|.+|+|||||||++||++|+|++++.+.|||+++++|+++|++|+|+
T Consensus 242 ~rv~~tvG~~it~l~p~~g~~a~l~sa~~v~~as~~GlPvStT~~~vgaivGvG~~~~~~~V~w~~~~~I~~~Wi~T~p~ 321 (326)
T PF01384_consen 242 WRVIRTVGEKITKLDPSRGFSAQLSSALTVLIASLLGLPVSTTHAIVGAIVGVGLARGFRSVNWKTVRKIVLGWILTLPI 321 (326)
T ss_pred HHHHHHhccchhccCcchhHHHHHHHHHHHHHHHhcCCCcchhheeeeeeEeeeeecCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 010560 487 CCGAA 491 (507)
Q Consensus 487 a~~~s 491 (507)
|+++|
T Consensus 322 a~~~S 326 (326)
T PF01384_consen 322 AALLS 326 (326)
T ss_pred HHHhC
Confidence 99875
No 3
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-56 Score=454.40 Aligned_cols=154 Identities=27% Similarity=0.542 Sum_probs=146.1
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhccccCCCCCcccccchhHHHHHHHHHHHHHHHHhhhhHH
Q 010560 330 IEDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKL 409 (507)
Q Consensus 330 ~e~~f~~lqv~sa~~~aFahGaNDvanaigp~~~i~~~~~~g~~~~~~~~~~~~~~vp~wil~~gg~~i~~G~~~~G~rV 409 (507)
.|+.||++|+++||++||+||+||+||++||+++++. . ...|.|++++||+++++|++++||||
T Consensus 170 ~~~~~r~l~i~sa~~~aF~hGaNdvanaiGpi~~~~~---~-------------~~~~~~v~~~g~~~i~lG~~~~g~Rv 233 (326)
T COG0306 170 VERIFRILLIISASLVAFAHGANDVANAIGPLVAVLI---S-------------SLPPFWVLVLGGIALALGTLTGGPRV 233 (326)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHh---h-------------ccccHHHHHHHHHHHHHHHHHccHHH
Confidence 4778999999999999999999999999999998764 0 24689999999999999999999999
Q ss_pred HHHHhccceeccCCchHHHHHHHHHHHHHHhhcCCcccccccchhceeeeeecCCCcccchHHHHHHhHHhhhhHHHHHH
Q 010560 410 TQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCCG 489 (507)
Q Consensus 410 i~TvG~~it~l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~a~~ 489 (507)
|||+|+|||+++|.||||+|+++|+++.+||.+|+||||||+++|||+|+|++...+.+||+++++|+.+|++|+|++++
T Consensus 234 i~TvG~kIt~L~p~~gfsA~~~sa~~v~~as~~GlPvStT~~~vgaI~GvG~~~~~~~v~~~~~~~Iv~aWvvT~p~a~~ 313 (326)
T COG0306 234 IETVGKKITELTPSRGFSAQLSSAITVLLASLLGLPVSTTHTLVGAVLGVGLALAGGAVNWKVIKNIVLAWVVTLPAAAL 313 (326)
T ss_pred HHHHhhhhcccCcchhHHHHHHHHHHHHHHHHcCCCcccceeeeeeeeecchhhccCceeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHh
Q 010560 490 AAFAIFYASV 499 (507)
Q Consensus 490 ~s~~l~~~~~ 499 (507)
+|+++|....
T Consensus 314 ls~~~~~~~~ 323 (326)
T COG0306 314 LSALLYWLLL 323 (326)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 4
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=99.82 E-value=2.4e-20 Score=191.65 Aligned_cols=145 Identities=23% Similarity=0.354 Sum_probs=125.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhccccCCCCCcccccchhHHHHHHHHHHHHHHHHhhhhHHHHHHhc
Q 010560 336 VPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGG 415 (507)
Q Consensus 336 ~lqv~sa~~~aFahGaNDvanaigp~~~i~~~~~~g~~~~~~~~~~~~~~vp~wil~~gg~~i~~G~~~~G~rVi~TvG~ 415 (507)
.+-++.+.+++|+-|+||++|++||... ++ .-.|...+++.+++..+|.++.|.||.+|+++
T Consensus 6 ~~~li~~l~~a~~iGand~ana~gtaVg------s~------------alt~~~Av~laavf~f~Ga~l~g~~V~~TI~~ 67 (326)
T COG0306 6 VLALIAALFFAFNIGANDTANAVGTAVG------SG------------ALTPRQAVLLAAVFNFLGALLGGGNVAETIGS 67 (326)
T ss_pred HHHHHHHHHHHHHhcccchhhhhhhhhc------cC------------CccHHHHHHHHHHHHHHHHHHcCccHHHHHhc
Confidence 4456778999999999999999998743 11 12244556779999999999999999999999
Q ss_pred ccee-------ccCCchHHHHHHHHHHHHHHhhcCCcccccccchhceeeeeecCCCcccchHHHHHHhHHhhhhHHHHH
Q 010560 416 KLTY-------MSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCC 488 (507)
Q Consensus 416 ~it~-------l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~a~ 488 (507)
++.+ +.|.--+++-+++++++++++++|+|+||||+++|+++|+|++.+...++|+.+.+|+.+|+++|.+++
T Consensus 68 ~iv~~~~~~~~~~~~~~~aaLlaa~~w~~ia~~~GiP~StshaiiGaiiG~gla~~~~~~~~~~~~~Iv~swvlsPii~~ 147 (326)
T COG0306 68 GIVDPGLLNDSLTPAGVLAALLAAILWNLIATYLGIPVSTSHALIGAIIGAGLALGGGVVDWGVLGKIVASWVLSPILGG 147 (326)
T ss_pred CCCCchhccchhhHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHH
Confidence 9965 446667889999999999999999999999999999999999975336999999999999999999999
Q ss_pred HHHHHHHHHH
Q 010560 489 GAAFAIFYAS 498 (507)
Q Consensus 489 ~~s~~l~~~~ 498 (507)
.+++++|...
T Consensus 148 ~ia~~l~~~~ 157 (326)
T COG0306 148 VLAYLLYSLL 157 (326)
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 5
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=99.78 E-value=5.2e-19 Score=182.79 Aligned_cols=132 Identities=24% Similarity=0.360 Sum_probs=115.7
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccccCCCCCcccccchhHHHHHHHHHHHHHHHHhhhhHHHHHHhccceeccCCc-----
Q 010560 350 SVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSR----- 424 (507)
Q Consensus 350 GaNDvanaigp~~~i~~~~~~g~~~~~~~~~~~~~~vp~wil~~gg~~i~~G~~~~G~rVi~TvG~~it~l~p~r----- 424 (507)
|+||++|++|+... + +.-.+...+++++++..+|.++.|.+|++|++++|.+.+...
T Consensus 2 GaND~an~~gt~Vg------s------------~al~~~~A~ila~i~~~lGa~l~G~~V~~ti~~~iv~~~~~~~~~~~ 63 (326)
T PF01384_consen 2 GANDAANSFGTAVG------S------------RALTPRQALILAAIFNFLGALLFGTAVAETIGKGIVDPSYFTVDDPQ 63 (326)
T ss_pred CccchHHHHHHHHh------c------------CccCHHHHHHHHHHHHHhHHHHhhHHHHHHHHhccccccccccccch
Confidence 89999999998753 1 222355677889999999999999999999999997655443
Q ss_pred -----hHHHHHHHHHHHHHHhhcCCcccccccchhceeeeeecCC-CcccchH-HHHHHhHHhhhhHHHHHHHHHHHHHH
Q 010560 425 -----GLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADD-IQNVNWK-LLFKFICGWVMTIIFCCGAAFAIFYA 497 (507)
Q Consensus 425 -----gf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG~~~~-~~~V~w~-~~~~I~~~WiiT~p~a~~~s~~l~~~ 497 (507)
-+++-+++++++++++++|+|+||||+++|+++|+|++.+ .+.+||. .+.+|+.+|+++|.+++++++++|..
T Consensus 64 ~~~~~~~~al~~a~iw~~i~t~~glPvStThalvGal~G~~l~~~g~~~v~w~~~~~~I~~~wv~sPlia~~~a~~l~~~ 143 (326)
T PF01384_consen 64 ILMIGMLAALLAAAIWLLIATWLGLPVSTTHALVGALIGAGLASGGFSAVNWSKGLLKIVLSWVISPLIAFILAYILYRL 143 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999975 6899999 69999999999999999999999876
Q ss_pred Hh
Q 010560 498 SV 499 (507)
Q Consensus 498 ~~ 499 (507)
..
T Consensus 144 ~~ 145 (326)
T PF01384_consen 144 IR 145 (326)
T ss_pred HH
Confidence 54
No 6
>KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism]
Probab=99.69 E-value=6e-17 Score=170.74 Aligned_cols=144 Identities=18% Similarity=0.311 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhccccCCCCCcccccchhHHHHH-HHHHHHHHHHHhhhhHHHHHHhcc
Q 010560 338 HLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRA-LGGLGAVMGFILCGWKLTQCLGGK 416 (507)
Q Consensus 338 qv~sa~~~aFahGaNDvanaigp~~~i~~~~~~g~~~~~~~~~~~~~~vp~wil~-~gg~~i~~G~~~~G~rVi~TvG~~ 416 (507)
+++-|.+.+|+-|||||||+-|+-+ .+..+.+|+.. +.++...+|..+.|++|.+|+.+.
T Consensus 31 g~i~afll~f~mGANDvaNsfgtSV-------------------gSgvltl~QA~iLAsife~lGsvl~G~~V~dt~r~g 91 (512)
T KOG2493|consen 31 GFIVAFLLAFGMGANDVANSFGTSV-------------------GSGVLTLKQAYILASIFETLGSVLLGASVTDTMRKG 91 (512)
T ss_pred HHHHHHHHhcccCcccccccccccc-------------------ccCceehHHHHHHHHHHHHHHHHHccchhhhhHHhc
Confidence 4456788999999999999988532 22345566654 599999999999999999999999
Q ss_pred ceeccCCc---------hHHHHHHHHHHHHHHhhcCCcccccccchhceeeeeec-CCCcccchHHHHHHhHHhhhhHHH
Q 010560 417 LTYMSNSR---------GLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIA-DDIQNVNWKLLFKFICGWVMTIIF 486 (507)
Q Consensus 417 it~l~p~r---------gf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG~~-~~~~~V~w~~~~~I~~~WiiT~p~ 486 (507)
+.+.+-.. -.++-.|++.+.++||.+++|||||||+||+.+|.+++ +|.+++.|..+.+|+.+|++.|.+
T Consensus 92 VId~s~y~~~~~~lmlgqva~L~G~a~W~l~At~~~~PvSttHsiVgatigfs~~~~g~~Gi~w~~v~~iv~swfiSpil 171 (512)
T KOG2493|consen 92 VIDFSIYNDTPKTLMLGQVAALFGSAAWLLVATFLKLPVSTTHSIVGATIGFSLVARGFNGIVWMEVIKIVASWFISPIL 171 (512)
T ss_pred eeehHHhcCCHHHHHHHHHHHHHhHHHHHHHHHHHcCCccceeeeeeheeeeeeeeccccceeehhhHHHHHHHhhhHHH
Confidence 86544331 12467889999999999999999999999999999987 689999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 010560 487 CCGAAFAIFYASVH 500 (507)
Q Consensus 487 a~~~s~~l~~~~~~ 500 (507)
++.++.++|.+.-+
T Consensus 172 sg~~s~ilf~~v~~ 185 (512)
T KOG2493|consen 172 SGIISAILFFLVDH 185 (512)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 7
>COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms]
Probab=63.77 E-value=11 Score=41.62 Aligned_cols=88 Identities=15% Similarity=0.367 Sum_probs=55.7
Q ss_pred CcchhhhHHHHhhcCCChhHHHH----HHHHHHHhhcCCCCc--chhh-hhHHHHHH-------HHHhccCccccccccc
Q 010560 1 MIKVPVFLQFIKENQPSEGFLMW----TIWLVIATYFELPVS--PQQA-TQAALLGS-------MLVTEGFDYIPLWNKN 66 (507)
Q Consensus 1 ~~~~~~~~~~~~~~~~~p~~lMl----aiWL~~AT~~~lPVS--tTHs-ivGaiiG~-------~lva~G~~~V~~W~~~ 66 (507)
++|.|.|.+-++.....|+-+.+ +.+-+..||+|+++- -..+ ++|+++|= |+..+=..|+
T Consensus 22 l~k~~lf~~lm~~~~~~~~k~~~~~iFSlf~im~ty~Gl~i~dsiaNtR~igv~~gGllgGP~Vg~~vGl~~Gl------ 95 (557)
T COG3275 22 LSKTPLFIPLMQVTARLPHKLALYIIFSLFCIMGTYFGLHIDDSIANTRAIGVVMGGLLGGPVVGIIVGLTAGL------ 95 (557)
T ss_pred HhccHHHHHHHHhhcCCcceeehHHHHHHHHHhhceeccchhhhHHhhHHHHHHhcccccCChhhhhhhhhhhh------
Confidence 36899999999998888877655 777888899999995 2222 34444441 1111111122
Q ss_pred CCCCcCCCCceeeeeehhhhhhHHHHHHHHHH
Q 010560 67 DNHNFNGGGLLWIFLEWTVAPLFACMCACFLF 98 (507)
Q Consensus 67 ~~~~~~~~g~~~I~~sW~isP~lsg~~~~~lf 98 (507)
+.+..+|+ -..+-.+|-++.|++++.+=
T Consensus 96 --hR~~mGg~--ta~~c~iSti~~G~l~g~~~ 123 (557)
T COG3275 96 --HRYSMGGM--TALSCAISTILEGLLGGLVH 123 (557)
T ss_pred --hhhhcCCc--hhHHHHHHHHHHHHHHHHHH
Confidence 12222343 35688899999999888763
No 8
>PF14342 DUF4396: Domain of unknown function (DUF4396)
Probab=53.01 E-value=61 Score=30.10 Aligned_cols=64 Identities=13% Similarity=0.100 Sum_probs=38.6
Q ss_pred CcchhhhhHHHHHHHHHhccCcc--cccccccCCCCcCCCCceeeeeehhhhhhHHHHHHHHHHHHHHHhhc-ccccHHH
Q 010560 37 VSPQQATQAALLGSMLVTEGFDY--IPLWNKNDNHNFNGGGLLWIFLEWTVAPLFACMCACFLFILLKVLIL-RHKNARE 113 (507)
Q Consensus 37 VStTHsivGaiiG~~lva~G~~~--V~~W~~~~~~~~~~~g~~~I~~sW~isP~lsg~~~~~lf~lir~~IL-~r~np~~ 113 (507)
+||+|+..|..+|--++.--... . .| .+...|+++=+++=+++..++... +. +++-+++
T Consensus 8 ~~T~hC~aGC~lGdi~~~~~~~~~~~-g~--------------~~~~~~~l~~~la~~~gi~~~~~~---l~~~~~~~~~ 69 (139)
T PF14342_consen 8 VATLHCLAGCTLGDIIGMWIVQATLL-GW--------------SMWAIMILAYALAFLFGIAFQYFP---LMPMRGLSYG 69 (139)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-cc--------------cHHHHHHHHHHHHHHHHHHHHHHH---HHhhcCCCHH
Confidence 58999999998886554322222 1 12 255677777666666665554332 22 4666787
Q ss_pred HHHHH
Q 010560 114 RILIF 118 (507)
Q Consensus 114 ~al~~ 118 (507)
++++.
T Consensus 70 ~al~~ 74 (139)
T PF14342_consen 70 RALKT 74 (139)
T ss_pred HHHHH
Confidence 77774
No 9
>TIGR03113 exosortase_2 exosortase 2. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. We designate this relatively uncommon proteobacterial type to be type 2. We propose the gene symbol xrtB. Most species encountered so far with xrtB also contain xrtA (TIGR03109).
Probab=42.39 E-value=78 Score=32.52 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=37.4
Q ss_pred HHhhhhHHHHHHhcccee---ccCCchH--------HHHHHHHHHHHHHhhcCCcccccccch
Q 010560 402 FILCGWKLTQCLGGKLTY---MSNSRGL--------ASQLSTVAAVIIVSTTNLPVSTVHAFV 453 (507)
Q Consensus 402 ~~~~G~rVi~TvG~~it~---l~p~rgf--------~ael~aa~~v~~as~~GlPvStTh~~v 453 (507)
++.+|+|..|...-.+.- .-|-.++ .-+++|.+++.+-...|+||.-.....
T Consensus 100 l~~~G~~~~r~~~fPL~~Llf~vP~p~~l~~~lt~pLq~~~s~~a~~~L~~~Gipv~reG~~i 162 (268)
T TIGR03113 100 LITRGWRALRALWFPLFFLLFMIPLPGFVVDALTLPMKQAVSYVAEQILYWAGYPIARSGVIL 162 (268)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHcCCcHHHHhhhHHHHHHHHHHHHHHHHHHcCCCEEEeeeEE
Confidence 577899999999988743 3444333 234566677778889999999876554
No 10
>PF14150 YesK: YesK-like protein
Probab=35.27 E-value=1.7e+02 Score=24.87 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=22.9
Q ss_pred hhcccccHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 010560 104 LILRHKNARERILIFFP-VDYGLSAGLLCLFLVY 136 (507)
Q Consensus 104 ~IL~r~np~~~al~~lP-i~~~it~~i~~~~Iv~ 136 (507)
..+||+.|-|...+.+| ++..+.++...+++++
T Consensus 17 ~~lr~r~p~k~~~~il~~ililis~~~v~~S~f~ 50 (81)
T PF14150_consen 17 VLLRKRFPKKQPEIILPLILILISLLTVLISIFL 50 (81)
T ss_pred HHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHhe
Confidence 57788889888889999 4444455455556554
No 11
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=31.95 E-value=3.3e+02 Score=26.44 Aligned_cols=22 Identities=9% Similarity=0.264 Sum_probs=11.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhcc
Q 010560 86 APLFACMCACFLFILLKVLILR 107 (507)
Q Consensus 86 sP~lsg~~~~~lf~lir~~IL~ 107 (507)
+-++.++++++.+..+.+.+-+
T Consensus 115 tli~~~i~~G~~~~~~~~~i~~ 136 (206)
T PF06570_consen 115 TLILVSIVGGLVFYFIFKYIYP 136 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3344555555555555555543
No 12
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=25.37 E-value=1.1e+02 Score=27.13 Aligned_cols=85 Identities=12% Similarity=0.008 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhHHHHHHhccceeccCCchHHHHHHHHHHHHHHhhcCCcccccccchhce--eeeeecC
Q 010560 386 VSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSL--VGVGIAD 463 (507)
Q Consensus 386 vp~wil~~gg~~i~~G~~~~G~rVi~TvG~~it~l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vGav--vGvG~~~ 463 (507)
.++..++++++..+.|+...- ..+..++.-|+-...+-.+.+...+.-+.-.+|+|++.++=.++ +|+-+..
T Consensus 7 ~~~~~L~~Ai~~Ev~~t~~Lk------~s~gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig 80 (109)
T PRK10650 7 IHAAWLALAIVLEIVANIFLK------FSDGFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAG 80 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HhcCCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 355556678889999987763 22556677776666666666666666666789999999875543 2222221
Q ss_pred ---CCcccchHHHHHH
Q 010560 464 ---DIQNVNWKLLFKF 476 (507)
Q Consensus 464 ---~~~~V~w~~~~~I 476 (507)
-.+..+|..+.-|
T Consensus 81 ~~~f~e~~~~~~~~gi 96 (109)
T PRK10650 81 WILFGQRLNRKGWIGL 96 (109)
T ss_pred HHHcCCCCCHHHHHHH
Confidence 2466777655443
No 13
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=22.34 E-value=1.5e+02 Score=26.29 Aligned_cols=82 Identities=13% Similarity=0.107 Sum_probs=52.9
Q ss_pred HH-HHHHHHHHHHHHHhhhhHHHHHHhccceeccCCchHHHHHHHHHHHHHHhhcCCcccccccchh--ceeeeeecC--
Q 010560 389 WF-RALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG--SLVGVGIAD-- 463 (507)
Q Consensus 389 wi-l~~gg~~i~~G~~~~G~rVi~TvG~~it~l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vG--avvGvG~~~-- 463 (507)
|+ +++++++.++|....- ..++.++.-|+-...+-.+.+...+.-..-.+|+|..+++=. +++|+-+..
T Consensus 4 wl~L~~a~~~Ev~~~~~lK------~s~gf~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~ 77 (110)
T PRK09541 4 YIYLGGAILAEVIGTTLMK------FSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWG 77 (110)
T ss_pred HHHHHHHHHHHHHHHHHHH------HhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHH
Confidence 44 4457888888887553 225566777776777777777777776777899999999843 333332222
Q ss_pred -CCcccchHHHHHH
Q 010560 464 -DIQNVNWKLLFKF 476 (507)
Q Consensus 464 -~~~~V~w~~~~~I 476 (507)
-.+..||..+.-+
T Consensus 78 ~f~e~~~~~~~~gi 91 (110)
T PRK09541 78 FFGQRLDLPAIIGM 91 (110)
T ss_pred HhCCCCCHHHHHHH
Confidence 2467777665444
No 14
>PF14147 Spore_YhaL: Sporulation protein YhaL
Probab=22.09 E-value=78 Score=24.72 Aligned_cols=25 Identities=20% Similarity=0.691 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhHHHHHHhc
Q 010560 386 VSWWFRALGGLGAVMGFILCGWKLTQCLGG 415 (507)
Q Consensus 386 vp~wil~~gg~~i~~G~~~~G~rVi~TvG~ 415 (507)
+|+|+.++ .+|+++-||..++|.-+
T Consensus 1 ~PwWvY~v-----i~gI~~S~ym~v~t~~e 25 (52)
T PF14147_consen 1 IPWWVYFV-----IAGIIFSGYMAVKTAKE 25 (52)
T ss_pred CcchHHHH-----HHHHHHHHHHHHHHHHH
Confidence 48897754 56888889999998763
No 15
>PF11045 YbjM: Putative inner membrane protein of Enterobacteriaceae; InterPro: IPR020368 This entry contains membrane proteins with no known function.; GO: 0016021 integral to membrane
Probab=21.86 E-value=3.4e+02 Score=24.97 Aligned_cols=14 Identities=29% Similarity=0.399 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHhh
Q 010560 153 AVALATFIGAVLPL 166 (507)
Q Consensus 153 ~~~v~~~i~~~l~~ 166 (507)
+++.=++.|+++..
T Consensus 98 SAvFWc~lGAL~~l 111 (125)
T PF11045_consen 98 SAVFWCALGALLVL 111 (125)
T ss_pred HHHHHHHhHHHHHH
Confidence 33333455555554
No 16
>COG1283 NptA Na+/phosphate symporter [Inorganic ion transport and metabolism]
Probab=21.74 E-value=3.5e+02 Score=30.71 Aligned_cols=104 Identities=14% Similarity=0.266 Sum_probs=51.2
Q ss_pred HHHHHHHHHHH-HHHHHhhhhHHHHHHhccce----e--ccCCchHHHHHHHHHHHHHHhhcCCcccccccchhceeeee
Q 010560 388 WWFRALGGLGA-VMGFILCGWKLTQCLGGKLT----Y--MSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVG 460 (507)
Q Consensus 388 ~wil~~gg~~i-~~G~~~~G~rVi~TvG~~it----~--l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vGavvGvG 460 (507)
.|+.++|++++ ..|+-..|--+.+.-|.++. + =+|..||.+-+ .+|+++=| -|+|-.++.+.++.|
T Consensus 6 ~~l~l~g~v~l~L~g~~~m~~Gv~~~~G~~lr~~L~~~t~np~~gvl~Gi--~~T~llQS-----Statt~lt~gfV~aG 78 (533)
T COG1283 6 VLLNLLGAVALLLFGIKMVGDGVQRAAGDRLRKILARFTSNPILGVLAGI--VATALLQS-----STATTVLTIGFVAAG 78 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCCcHHHHHHHH--HHHHHHHh-----cchHHHHHHHHHhcc
Confidence 46666666554 23443444444444565552 2 35667776543 33333322 133455666666667
Q ss_pred ecCCCcccch---HHHHHHhHHhhhhH------HHHHHHHHHHHHHH
Q 010560 461 IADDIQNVNW---KLLFKFICGWVMTI------IFCCGAAFAIFYAS 498 (507)
Q Consensus 461 ~~~~~~~V~w---~~~~~I~~~WiiT~------p~a~~~s~~l~~~~ 498 (507)
+..-..++-- --++..+.+|++++ |.+.++++++|.+.
T Consensus 79 l~sl~~Ai~vilGANIGTt~Ta~iva~~l~~~~~~ll~~G~~~~~f~ 125 (533)
T COG1283 79 LLSLKQAIGVILGANIGTTVTAWIVALDLSWLSPPLLAIGAILFFFG 125 (533)
T ss_pred ccchhhhhhheeccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 6642211110 12555667777765 33344555555554
No 17
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=20.43 E-value=1.9e+02 Score=24.53 Aligned_cols=60 Identities=18% Similarity=0.056 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhccceeccCCchHHHHHHHHHHHHHHhhcCCcccccccchh
Q 010560 389 WFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG 454 (507)
Q Consensus 389 wil~~gg~~i~~G~~~~G~rVi~TvG~~it~l~p~rgf~ael~aa~~v~~as~~GlPvStTh~~vG 454 (507)
..++++++..+.|....-+ .+..++..|.-+...-.+.+...+....-.+|+|...++-.
T Consensus 4 l~L~~a~~~ev~~~~~lK~------s~g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~ 63 (93)
T PF00893_consen 4 LFLLLAILFEVVGTIALKA------SHGFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWT 63 (93)
T ss_dssp HHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH------HHhhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 3445577777777766644 55566777777777667777777777777899999988643
Done!