Query 010561
Match_columns 507
No_of_seqs 265 out of 2166
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 09:27:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010561.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010561hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 2.2E-48 7.5E-53 393.9 35.9 431 49-482 6-447 (460)
2 3mkt_A Multi antimicrobial ext 99.8 1.9E-19 6.5E-24 181.5 19.5 205 51-256 234-445 (460)
3 1pw4_A Glycerol-3-phosphate tr 75.1 58 0.002 30.9 37.0 21 453-473 409-429 (451)
4 4aps_A DI-OR tripeptide H+ sym 70.6 79 0.0027 30.5 27.5 32 442-473 436-467 (491)
5 3o7q_A L-fucose-proton symport 44.6 2E+02 0.0069 26.8 31.4 44 57-100 28-73 (438)
6 2iub_A CORA, divalent cation t 29.4 1.1E+02 0.0038 28.4 7.0 57 424-483 298-362 (363)
7 2k1k_A Ephrin type-A receptor 26.0 68 0.0023 18.7 2.9 13 233-245 14-26 (38)
8 2jwa_A Receptor tyrosine-prote 20.2 1.3E+02 0.0043 18.3 3.4 9 249-257 30-38 (44)
9 1b9u_A Protein (ATP synthase); 16.7 1.5E+02 0.0053 16.3 3.7 30 462-491 5-34 (34)
10 4hkr_A Calcium release-activat 14.8 5.2E+02 0.018 21.6 13.7 123 65-188 28-166 (214)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=2.2e-48 Score=393.92 Aligned_cols=431 Identities=21% Similarity=0.377 Sum_probs=394.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 010561 49 ATWIELKNLFRLAAPAILVYMLNNLVAMSTQIFCGHLGNLELAAVSLGNTGIQVFAYGLMLGMGSATETLCGQAYGAQKY 128 (507)
Q Consensus 49 ~~~~~~~~i~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~g~~~~ 128 (507)
..++..|++++.++|.++++++..+.+.+|+.+++|+|++++|+++++.++.. +...+..|++.+..+.+++++|++|+
T Consensus 6 ~~~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~-~~~~~~~g~~~~~~~~is~~~g~~~~ 84 (460)
T 3mkt_A 6 RYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWL-PSILFGVGLLMALVPVVAQLNGAGRQ 84 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHH-HHHHHHHHHHHHHGGGCTTTTSSSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 34678899999999999999999999999999999999999999999999988 77778899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHcCChhHHHH
Q 010561 129 DMLGVYLQRSAVILTATGIPLMVIYIFSKQILLLLGESSAIASAAAIFVFGLIPQIFAYAVNFPIQKFLQAQSIISPSAY 208 (507)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 208 (507)
++.++.+++++.+.++.++++.++..+.++++.+++.+++..+.+..|++++.++.++..+...+.+.+|+.|+++.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 164 (460)
T 3mkt_A 85 HKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMV 164 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 99999999999999999998877778889999989989999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh-c---CCccchhHHHHHHHHHHHHHHHHHHHHhcccccc-c-cCCCCHHhhhhhHHHHHHH
Q 010561 209 ISAATLVVHVLLSWVAIFK-L---GWGLLGASLVLSLSWWIIVAAQFVYILLSERCKK-T-WTGFSLQAFSGLWDFLKLS 282 (507)
Q Consensus 209 ~~i~~~~~~i~l~~~li~~-~---~~g~~g~~~a~~l~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~ 282 (507)
.++++.++|+++++++++. + ++|+.|+++++.+++.+..++..++.+++++.+. + ++++...+++.+|+++++|
T Consensus 165 ~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 244 (460)
T 3mkt_A 165 IGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 244 (460)
T ss_dssp HHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHh
Confidence 9999999999999999975 3 6899999999999999999988888776533221 1 1222233446799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHH
Q 010561 283 TASAVMLCLEIWYYQIIVLIAGLLDNAEIVLDSLSICMTIAGWVFMIAVGFNAAASVRVGNELGAAHPKSCKFSVIVVTS 362 (507)
Q Consensus 283 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~va~~~i~~~i~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~ 362 (507)
+|.+++++...+.+.+++.+++.+| +.++++|++++++.++..++..+++++..|.+++++|++|.++.++..+++.+
T Consensus 245 ~p~~~~~~~~~~~~~~~~~~~~~~g--~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~~ 322 (460)
T 3mkt_A 245 FPVAAALFFEVTLFAVVALLVAPLG--STVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLM 322 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999986 45688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCchhHHHHHHHHhHHHHHHHHHhhHHHHHHHHHhhcCcchhHHHHHHHHHHHhhH
Q 010561 363 ISLALSVILAILVLILRNVMSYAFTGGSTVADSVAELSPFLALSVILNGIQPVLSGVAVGCGWQAFVAYVNVGCYYLIGI 442 (507)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i 442 (507)
++..+++++++++.++++++..+|.+|+++++.+..++++++++.++.+++.+..+++++.||++.+++.++++.|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i 402 (460)
T 3mkt_A 323 TGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGL 402 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988899999999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHh----cC-CCcchHHHHHHHHHHHHHHHHHHHHHhcC
Q 010561 443 PIGCLLGFK----FN-LGTKGIWSGMIGGTLIQTIILVYVTLRTD 482 (507)
Q Consensus 443 ~l~~~l~~~----~~-~g~~g~~~a~~i~~~~~~~~~~~~~~~~~ 482 (507)
|+++++... ++ +|..|+|+++.+++++..++..++++|..
T Consensus 403 ~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~ 447 (460)
T 3mkt_A 403 PTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQ 447 (460)
T ss_dssp HHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSC
T ss_pred HHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999776 56 89999999999999998888766665544
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.83 E-value=1.9e-19 Score=181.53 Aligned_cols=205 Identities=16% Similarity=0.107 Sum_probs=190.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcch
Q 010561 51 WIELKNLFRLAAPAILVYMLNNLVAMSTQIFCGHLGNLELAAVSLGNTGIQVFAYGLMLGMGSATETLCGQAYGAQKYDM 130 (507)
Q Consensus 51 ~~~~~~i~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~g~~~~~~ 130 (507)
++..|++++.++|.+++++...+...+|+.+++++|++++|+|+++.++.+ +...+..+++++..|.+++++|++|+++
T Consensus 234 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~-~~~~~~~~~~~a~~p~i~~~~g~~~~~~ 312 (460)
T 3mkt_A 234 PKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSS-LVFMFPMSIGAAVSIRVGHKLGEQDTKG 312 (460)
T ss_dssp TSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 456788999999999999999999999999999999999999999999999 7778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHcCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHcCChhHHHHH
Q 010561 131 LGVYLQRSAVILTATGIPLMVI-YIFSKQILLLLGESSAIASAAAIFVFGLIPQIFAYAVNFPIQKFLQAQSIISPSAYI 209 (507)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 209 (507)
+++..+.+..+....+++++++ .++.+++..++.++++..+.+..+++++.++.++.++..+..+.+++.||++.++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 392 (460)
T 3mkt_A 313 AAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHR 392 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 9999999999999999999887 889999999998888888899999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHh----cC-CccchhHHHHHHHHHHHHHHHHHHHHh
Q 010561 210 SAATL-VVHVLLSWVAIFK----LG-WGLLGASLVLSLSWWIIVAAQFVYILL 256 (507)
Q Consensus 210 ~i~~~-~~~i~l~~~li~~----~~-~g~~g~~~a~~l~~~~~~~~~~~~~~~ 256 (507)
++++. ++++++++++.+. ++ +|+.|+++++.+++.+..++..+..+|
T Consensus 393 ~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~ 445 (460)
T 3mkt_A 393 TFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYW 445 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 9999999999987 56 799999999999999988777655554
No 3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=75.08 E-value=58 Score=30.91 Aligned_cols=21 Identities=33% Similarity=0.615 Sum_probs=11.7
Q ss_pred CCCcchHHHHHHHHHHHHHHH
Q 010561 453 NLGTKGIWSGMIGGTLIQTII 473 (507)
Q Consensus 453 ~~g~~g~~~a~~i~~~~~~~~ 473 (507)
..|....++...+..++..++
T Consensus 409 ~~g~~~~~~~~~~~~~~~~~~ 429 (451)
T 1pw4_A 409 FFGWDGGFMVMIGGSILAVIL 429 (451)
T ss_dssp SSCSHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHH
Confidence 356666666655555554444
No 4
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=70.61 E-value=79 Score=30.50 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=14.9
Q ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHHHH
Q 010561 442 IPIGCLLGFKFNLGTKGIWSGMIGGTLIQTII 473 (507)
Q Consensus 442 i~l~~~l~~~~~~g~~g~~~a~~i~~~~~~~~ 473 (507)
.....+.+...+.+....+....+..++..++
T Consensus 436 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (491)
T 4aps_A 436 ALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIV 467 (491)
T ss_dssp HHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 33334444444445555555555544444443
No 5
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=44.55 E-value=2e+02 Score=26.84 Aligned_cols=44 Identities=16% Similarity=0.014 Sum_probs=19.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhcC--ChhHHHHHHHHHHHH
Q 010561 57 LFRLAAPAILVYMLNNLVAMSTQIFCGHL--GNLELAAVSLGNTGI 100 (507)
Q Consensus 57 i~~~~~p~~~~~~~~~~~~~i~~~~i~~l--g~~~~~~~~~~~~~~ 100 (507)
++....-..+..............+...+ ++.+.+.......+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~ 73 (438)
T 3o7q_A 28 FALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFG 73 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 33333333344444344444444444444 455555544433333
No 6
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=29.43 E-value=1.1e+02 Score=28.44 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=25.8
Q ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHh-------cCCC-cchHHHHHHHHHHHHHHHHHHHHHhcCh
Q 010561 424 GWQAFVAYVNVGCYYLIGIPIGCLLGFK-------FNLG-TKGIWSGMIGGTLIQTIILVYVTLRTDW 483 (507)
Q Consensus 424 g~~~~~~~~~~~~~~~~~i~l~~~l~~~-------~~~g-~~g~~~a~~i~~~~~~~~~~~~~~~~~~ 483 (507)
+.....-..++++ ++.+|+.++-+.+ |..+ -+|-+++.. ..++.++..+++++|++|
T Consensus 298 ~~N~imk~LTiit--~IflP~T~IaGiyGMNf~~mPel~~~~Gy~~~l~-~m~~i~~~~~~~Fkrk~W 362 (363)
T 2iub_A 298 KTNEVMKVLTIIA--TIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLA-VMGVIAVIMVVYFKKKKW 362 (363)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHTTSCC--------------CHHHHH-HHHHHHHHHHTTTTSCC-
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHhhhcccCCCCCcccCcHHHHHHHH-HHHHHHHHHHHHHHHccc
Confidence 3444445566665 3456776665532 1111 123333333 333444455667777777
No 7
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=25.98 E-value=68 Score=18.71 Aligned_cols=13 Identities=15% Similarity=0.033 Sum_probs=5.6
Q ss_pred chhHHHHHHHHHH
Q 010561 233 LGASLVLSLSWWI 245 (507)
Q Consensus 233 ~g~~~a~~l~~~~ 245 (507)
.|+.++.+++-.+
T Consensus 14 AGiVvG~v~gv~l 26 (38)
T 2k1k_A 14 VAVIFGLLLGAAL 26 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHH
Confidence 3444444444333
No 8
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=20.22 E-value=1.3e+02 Score=18.26 Aligned_cols=9 Identities=11% Similarity=-0.186 Sum_probs=3.9
Q ss_pred HHHHHHHhc
Q 010561 249 AQFVYILLS 257 (507)
Q Consensus 249 ~~~~~~~~~ 257 (507)
....+++|+
T Consensus 30 ~~~~~~RRR 38 (44)
T 2jwa_A 30 VFGILIKRR 38 (44)
T ss_dssp HHHHHHHHH
T ss_pred HHHhheehh
Confidence 334444443
No 9
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=16.71 E-value=1.5e+02 Score=16.33 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Q 010561 462 GMIGGTLIQTIILVYVTLRTDWNKEVEKAR 491 (507)
Q Consensus 462 a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (507)
++.+...+.+++..+.++|.-|++..+-.+
T Consensus 5 ~~l~~~~i~Flil~~~l~kf~~~Pi~~~l~ 34 (34)
T 1b9u_A 5 ATILGQAIAFVLFVLFCMKYVWPPLMAAIE 34 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
No 10
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=14.80 E-value=5.2e+02 Score=21.58 Aligned_cols=123 Identities=13% Similarity=0.003 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhc-CChhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hcCCCcc
Q 010561 65 ILVYMLNNLVAMSTQIFCGH-LGNLE------LAAVSLGNTGIQVFAYGLMLGMGSATETLCGQA--------YGAQKYD 129 (507)
Q Consensus 65 ~~~~~~~~~~~~i~~~~i~~-lg~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~--------~g~~~~~ 129 (507)
..++...-+.++....++-- ++++. +.+|+....+.- ....+..-+++-+.|-+-.. ..+.-.+
T Consensus 28 A~S~lSALLaGFAMVAmVE~ql~~~~~~p~~LLi~fav~Ttllv-~vml~AlMIsTcILPnIeav~~~h~~~~v~esPH~ 106 (214)
T 4hkr_A 28 ASSKTSALLSGFAMVAMVEVQLDHDTNVPPGMLIAFAICTTLLV-AVHMLALMISTCILPNIETVSNLHSISLVHESPHE 106 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHH-HHHHHHHHHHHHTTTC----------------CHH
T ss_pred HHHHHHHHHhccceeeEEEEeccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHhhcccccccCCChHH
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHcCCCHHHHHHHHHHHHHHHhHHHHHH
Q 010561 130 MLGVYLQRSAVILTATGIPLMVI-YIFSKQILLLLGESSAIASAAAIFVFGLIPQIFAYA 188 (507)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 188 (507)
+.+.++-.+..++..+++++.+. .....++--+=..++.-+..+...++.+..+..|..
T Consensus 107 r~~~yIE~AW~fST~lGi~LFL~evall~WVKF~~~~~~aa~~~t~vliPv~i~F~~Fa~ 166 (214)
T 4hkr_A 107 RLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAI 166 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhheEEeecCCcHHHHHHHHHHHHHHHHHHHHHH
Done!