Query         010565
Match_columns 507
No_of_seqs    177 out of 1909
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 02:01:14 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010565.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010565hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 9.2E-88   2E-92  639.1  46.4  461   30-506    25-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 1.8E-82 3.8E-87  626.3  49.1  478   21-506    18-499 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 7.6E-82 1.7E-86  588.5  42.5  455   31-506    31-499 (499)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 1.6E-80 3.4E-85  612.7  48.2  470   30-506    33-509 (517)
  5 PLN03112 cytochrome P450 famil 100.0 2.7E-80 5.9E-85  612.4  49.6  498    6-507     7-509 (514)
  6 PLN02971 tryptophan N-hydroxyl 100.0 2.6E-80 5.7E-85  612.8  48.7  469   29-505    55-533 (543)
  7 PLN02966 cytochrome P450 83A1  100.0   4E-80 8.8E-85  608.2  47.4  478   21-506    19-500 (502)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 6.4E-80 1.4E-84  604.4  48.5  465   30-506    30-497 (504)
  9 PLN02183 ferulate 5-hydroxylas 100.0 1.2E-79 2.5E-84  606.4  47.7  466   29-505    34-511 (516)
 10 PTZ00404 cytochrome P450; Prov 100.0 8.4E-79 1.8E-83  597.5  45.0  477    6-505     4-482 (482)
 11 PLN00168 Cytochrome P450; Prov 100.0 4.4E-78 9.4E-83  595.6  47.4  469   28-506    32-517 (519)
 12 PLN02394 trans-cinnamate 4-mon 100.0 1.1E-77 2.4E-82  592.7  47.8  470   26-506    25-502 (503)
 13 PLN02290 cytokinin trans-hydro 100.0 3.8E-77 8.1E-82  590.3  42.8  454   30-507    41-516 (516)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 2.5E-77 5.3E-82  580.8  35.5  456   29-507    33-497 (497)
 15 PLN02655 ent-kaurene oxidase   100.0 1.8E-75 3.9E-80  569.8  42.9  457   33-507     1-465 (466)
 16 PLN02500 cytochrome P450 90B1  100.0 3.4E-75 7.3E-80  572.1  40.2  438   27-504    34-488 (490)
 17 PLN03018 homomethionine N-hydr 100.0 9.7E-74 2.1E-78  561.3  49.0  470   30-506    39-524 (534)
 18 PLN02774 brassinosteroid-6-oxi 100.0 7.7E-75 1.7E-79  564.9  38.5  432   27-504    27-462 (463)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 1.1E-74 2.4E-79  527.0  34.9  456   30-506    49-518 (519)
 20 PLN02169 fatty acid (omega-1)- 100.0 1.5E-73 3.2E-78  558.3  40.9  462   21-506    24-500 (500)
 21 PLN03195 fatty acid omega-hydr 100.0 1.3E-73 2.8E-78  564.5  39.6  459   32-506    31-516 (516)
 22 PF00067 p450:  Cytochrome P450 100.0 5.5E-75 1.2E-79  573.6  26.2  455   33-502     1-463 (463)
 23 PLN02196 abscisic acid 8'-hydr 100.0 8.7E-73 1.9E-77  549.9  39.2  428   27-505    31-462 (463)
 24 PLN02738 carotene beta-ring hy 100.0 8.6E-72 1.9E-76  553.0  40.8  446   42-507   142-596 (633)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.3E-71 2.8E-76  541.0  39.4  438   27-507     3-451 (452)
 26 PLN02987 Cytochrome P450, fami 100.0 9.4E-71   2E-75  533.3  41.4  462    1-507     1-470 (472)
 27 PLN02302 ent-kaurenoic acid ox 100.0 2.1E-70 4.6E-75  540.9  43.6  440   26-506    37-488 (490)
 28 PLN02936 epsilon-ring hydroxyl 100.0 8.6E-71 1.9E-75  539.1  39.1  453   32-506    13-482 (489)
 29 KOG0684 Cytochrome P450 [Secon 100.0 7.7E-70 1.7E-74  482.6  34.0  474    1-507     2-486 (486)
 30 PLN02426 cytochrome P450, fami 100.0 1.5E-67 3.3E-72  514.9  41.0  443   38-506    48-500 (502)
 31 PLN02648 allene oxide synthase 100.0 5.5E-61 1.2E-65  461.1  29.8  408   30-477    16-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.8E-55 3.9E-60  418.4  33.6  360   52-476    24-387 (411)
 33 PHA03049 IMV membrane protein;  72.1      13 0.00029   24.4   4.6   42    1-42      1-42  (68)
 34 PF05961 Chordopox_A13L:  Chord  69.8      16 0.00035   24.2   4.6   35    1-35      1-35  (68)
 35 PF12508 DUF3714:  Protein of u  62.5       2 4.2E-05   36.3  -0.6   44  356-401    51-94  (200)
 36 PF08492 SRP72:  SRP72 RNA-bind  57.7     7.6 0.00017   25.2   1.6    8  420-427    44-51  (59)
 37 PF15330 SIT:  SHP2-interacting  57.1      24 0.00052   26.4   4.4   11   38-48     45-55  (107)
 38 KOG3653 Transforming growth fa  55.0      53  0.0011   31.8   7.1   37   61-97    221-257 (534)
 39 PF12554 MOZART1:  Mitotic-spin  55.0      39 0.00084   20.9   4.2   42  298-339     6-47  (48)
 40 PF14459 Prok-E2_C:  Prokaryoti  50.6      15 0.00033   26.9   2.3   19  434-452   103-121 (131)
 41 KOG1412 Aspartate aminotransfe  48.6      60  0.0013   29.5   6.1   75  277-373   332-408 (410)
 42 COG3763 Uncharacterized protei  48.5      20 0.00043   24.0   2.4   33    3-35      5-39  (71)
 43 PF01102 Glycophorin_A:  Glycop  47.0      23 0.00051   27.1   3.0    8   21-28     86-93  (122)
 44 PF05952 ComX:  Bacillus compet  46.3      22 0.00047   23.0   2.3   20  320-339     4-23  (57)
 45 KOG0114 Predicted RNA-binding   46.2      76  0.0017   23.4   5.2   58   32-91     13-76  (124)
 46 KOG3506 40S ribosomal protein   43.9      10 0.00023   23.8   0.6   10  440-449    13-22  (56)
 47 PF15206 FAM209:  FAM209 family  43.5      19 0.00041   27.8   2.0   39    4-42     39-77  (150)
 48 PF05393 Hum_adeno_E3A:  Human   40.5      76  0.0016   22.4   4.3    6   38-43     66-71  (94)
 49 PF06024 DUF912:  Nucleopolyhed  36.9      15 0.00032   27.2   0.6   28    1-28     64-91  (101)
 50 PF07438 DUF1514:  Protein of u  34.7      72  0.0016   21.0   3.3   20    1-20      1-20  (66)
 51 PF13893 RRM_5:  RNA recognitio  34.6 1.2E+02  0.0026   19.0   4.9   36   56-91      1-40  (56)
 52 TIGR03779 Bac_Flav_CT_M Bacter  34.4     8.7 0.00019   36.4  -1.2   44  357-402   255-298 (410)
 53 KOG1411 Aspartate aminotransfe  32.8 3.3E+02  0.0071   25.5   8.2   59  293-367   362-422 (427)
 54 PRK06789 flagellar motor switc  32.6      45 0.00098   23.0   2.3   40  363-402    21-62  (74)
 55 cd08780 Death_TRADD Death Doma  31.7   2E+02  0.0042   20.7   5.9   66  121-188    13-88  (90)
 56 PHA02681 ORF089 virion membran  30.1 1.9E+02  0.0042   20.1   6.7   18    9-26     10-27  (92)
 57 PF09201 SRX:  SRX;  InterPro:   29.4      48   0.001   25.8   2.2   23  446-468    18-40  (148)
 58 PF14129 DUF4296:  Domain of un  28.6 2.2E+02  0.0048   20.3   6.9   50  294-343    29-78  (87)
 59 COG1759 5-formaminoimidazole-4  28.2      81  0.0018   28.8   3.7   69  361-462   276-351 (361)
 60 PF12444 Sox_N:  Sox developmen  27.5      40 0.00086   23.9   1.4   20  456-475    60-79  (84)
 61 PF07886 BA14K:  BA14K-like pro  26.9      54  0.0012   18.1   1.6   16  434-449    16-31  (31)
 62 PF10777 YlaC:  Inner membrane   25.2      45 0.00098   26.3   1.5   38  322-359   115-152 (155)
 63 PF13625 Helicase_C_3:  Helicas  23.8 1.5E+02  0.0032   23.1   4.3   39   52-92     76-114 (129)
 64 PHA02902 putative IMV membrane  23.4 2.3E+02  0.0049   18.7   4.9   19   10-28     11-29  (70)
 65 PF09926 DUF2158:  Uncharacteri  23.4      87  0.0019   19.9   2.3   18   63-80      3-20  (53)
 66 PF11138 DUF2911:  Protein of u  22.8      94   0.002   24.8   2.9   40  382-422    52-98  (145)
 67 COG1707 ACT domain-containing   22.1      88  0.0019   25.3   2.5   39   49-87    153-196 (218)
 68 PLN02687 flavonoid 3'-monooxyg  22.1 1.1E+02  0.0024   30.8   4.0   34    6-39      6-39  (517)
 69 KOG3054 Uncharacterized conser  21.4 1.3E+02  0.0029   26.1   3.6   27    1-27      1-27  (299)
 70 PLN02196 abscisic acid 8'-hydr  21.3 1.5E+02  0.0031   29.4   4.6   31   10-40     11-41  (463)
 71 PHA03162 hypothetical protein;  21.2      81  0.0017   24.3   2.1   24  442-465     2-25  (135)
 72 PRK01844 hypothetical protein;  21.0      85  0.0018   21.4   1.9    6   30-35     34-39  (72)
 73 PF10264 Stork_head:  Winged he  20.2 1.8E+02  0.0038   20.5   3.4   39  315-353    13-53  (80)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.2e-88  Score=639.08  Aligned_cols=461  Identities=47%  Similarity=0.811  Sum_probs=405.5

Q ss_pred             CCCCCCCCCCCccccccCCCCC-CchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCC-CCcccc
Q 010565           30 LNLPPSPPGLPIIGNLHQLGSL-PHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPK-TTAGDV  107 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~-~~~~~~  107 (507)
                      .++||||+++|++||++++... ++..+.+|.++|||+|.+++|..++|||+++++++|++.+++..|.+|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7899999999999999999776 99999999999999999999999999999999999999999999999997 224455


Q ss_pred             cccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHH
Q 010565          108 LLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSV  187 (507)
Q Consensus       108 ~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (507)
                      +.+++.+++++.+|+.|+++||+....+++...+++....-.++++.+++++.+ ..++++||+...+..++.+++++.+
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence            566778889998999999999999888999999999888779999999999997 3233789999999999999999999


Q ss_pred             hccccccccccCcchhHHHHHHHHHHHHhcCCccccccc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 010565          188 LGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFP-SFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMSH  266 (507)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  266 (507)
                      ||.++...  .++...++.+.+.+.....+.+...+++| ++.++....+..++......++..++++.|++++++. + 
T Consensus       184 fG~rf~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~-  259 (489)
T KOG0156|consen  184 FGRRFEEE--DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G-  259 (489)
T ss_pred             hCCccccC--CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-
Confidence            99999974  12244568888888888888888889999 5666654446677777777789999999999998762 1 


Q ss_pred             CCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccC
Q 010565          267 EDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNK  346 (507)
Q Consensus       267 ~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  346 (507)
                       .   +++.|+++.++....+++.. .+++++|.+.+..+++||+|||++|+.|++.+|++||++|+|+|+||+++++.+
T Consensus       260 -~---~~~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~  334 (489)
T KOG0156|consen  260 -D---EEGRDFVDALLKLMKEEKAE-GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG  334 (489)
T ss_pred             -c---CCCCcHHHHHHHhhcccccC-CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence             1   22289999999887654322 299999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCcccCC
Q 010565          347 SSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFIN  426 (507)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  426 (507)
                      +.++.+|+.+||||+|||+||+|++|++|...||.+.+|+.++||.|||||.|+++.|++||||++|+||++|+||||++
T Consensus       335 r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~  414 (489)
T KOG0156|consen  335 RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLD  414 (489)
T ss_pred             CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcC
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEeeccCC
Q 010565          427 STIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMPTLYS  506 (507)
Q Consensus       427 ~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  506 (507)
                      ++ +.+.....++|||.|+|.|||..+|.+++..++|+||++|||+++++    ++|..... ++...+.++.+...+|.
T Consensus       415 ~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  415 SN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             Cc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCcceeeeecCC
Confidence            84 22336779999999999999999999999999999999999999987    23344443 66777778888888774


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.8e-82  Score=626.27  Aligned_cols=478  Identities=41%  Similarity=0.734  Sum_probs=390.1

Q ss_pred             HHHhhcCCCCCCCCCCCCCCccccccCCCC-CCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCC
Q 010565           21 LKLSRNKSKLNLPPSPPGLPIIGNLHQLGS-LPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNR   99 (507)
Q Consensus        21 ~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~   99 (507)
                      ++.+..++..+.||||+++|++||+..+.. +++.++.+++++||++|++++|+.++++++||+++++|+.++...|..+
T Consensus        18 ~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r   97 (499)
T PLN03234         18 FLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTAR   97 (499)
T ss_pred             HHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCC
Confidence            333444455678999999999999988854 6888999999999999999999999999999999999999887777777


Q ss_pred             CCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHH
Q 010565          100 PKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVT  179 (507)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~  179 (507)
                      +...........+....+...++.|+++|+.+..++|+++++..+.+.+.++++.+++++.+...+++.+|+.+.+..++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t  177 (499)
T PLN03234         98 PLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFT  177 (499)
T ss_pred             CCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHH
Confidence            65433322222233344455688999999986578999999999999999999999999986655677899999999999


Q ss_pred             HHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 010565          180 NNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEH  259 (507)
Q Consensus       180 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~  259 (507)
                      +|++++++||.+++..   .....++.+...+.............+|++.++..+.+..++..++.+.+.++++++++++
T Consensus       178 ~dvi~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~  254 (499)
T PLN03234        178 NCVVCRQAFGKRYNEY---GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDET  254 (499)
T ss_pred             HHHHHHHHhCCccccc---chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988753   1223445555555443333323344455544333233445678888999999999999887


Q ss_pred             HHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHH
Q 010565          260 RISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEV  339 (507)
Q Consensus       260 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (507)
                      ++. .    ....+..|+++.|++...++..+..++++++.+++.++++||+|||+++++|++++|++||++|+++++|+
T Consensus       255 ~~~-~----~~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei  329 (499)
T PLN03234        255 LDP-N----RPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEV  329 (499)
T ss_pred             Hhh-c----ccCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            643 1    11224568999998765433222368999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCC-CCCCc
Q 010565          340 RRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVW-DRAEE  418 (507)
Q Consensus       340 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~  418 (507)
                      ++++++.+.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++++++||||++| +||++
T Consensus       330 ~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~  409 (499)
T PLN03234        330 RNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNE  409 (499)
T ss_pred             HHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhh
Confidence            99998777789999999999999999999999999987679999999999999999999999999999999999 89999


Q ss_pred             cCCcccCCCCCC--CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccC
Q 010565          419 FLPERFINSTID--FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKH  496 (507)
Q Consensus       419 F~P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (507)
                      ||||||++++..  ....+..|+|||+|+|+|+|+++|++|+++++|+|+++|+|+++++..+..+.....++++..+++
T Consensus       410 F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (499)
T PLN03234        410 FIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKE  489 (499)
T ss_pred             cCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCC
Confidence            999999976432  223467899999999999999999999999999999999999988754455556667888888999


Q ss_pred             CeeEeeccCC
Q 010565          497 PLILMPTLYS  506 (507)
Q Consensus       497 ~~~v~~~~r~  506 (507)
                      ++.+.+++|.
T Consensus       490 ~~~~~~~~~~  499 (499)
T PLN03234        490 HLVLAPTKHI  499 (499)
T ss_pred             CeEEEeecCC
Confidence            9999999884


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.6e-82  Score=588.52  Aligned_cols=455  Identities=25%  Similarity=0.389  Sum_probs=363.2

Q ss_pred             CCCCCCCCCCccccccCC--CCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCC--CCCccc
Q 010565           31 NLPPSPPGLPIIGNLHQL--GSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRP--KTTAGD  106 (507)
Q Consensus        31 ~~~Pgp~~~p~~G~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~--~~~~~~  106 (507)
                      .-+|||+++|++||+..+  .+.......+...+|||+|.++.+.+|.++|.||+++++|+.+.-+.|.++.  ......
T Consensus        31 rGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~  110 (499)
T KOG0158|consen   31 RGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPE  110 (499)
T ss_pred             CCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCC
Confidence            368999999999999887  2333444445555559999999999999999999999999999888888843  222221


Q ss_pred             ccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHH
Q 010565          107 VLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRS  186 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~  186 (507)
                      .  ..+...+++..|+.||++|..+ +|.|++.+++.+.+.+.+.++++++.++++...+..+++.+.+.+++.|+|+++
T Consensus       111 ~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~  187 (499)
T KOG0158|consen  111 D--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSC  187 (499)
T ss_pred             C--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHh
Confidence            1  1123556777899999999998 899999999999999999999999999986443357889999999999999999


Q ss_pred             HhccccccccccCcchhHHHHHHHHHHHH-hcCCcc----ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 010565          187 VLGRRVEEESTAGGKSNKFGELSKRLLIQ-LGSISF----RDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRI  261 (507)
Q Consensus       187 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  261 (507)
                      +||.+.+...   ....+|.......+.. .....+    ...+|.+....   ..........+-+.+.+.+.++.|..
T Consensus       188 AfG~~~~s~~---d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~v~~~v~~R~~  261 (499)
T KOG0158|consen  188 AFGLDANSLR---DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVKLFPEDVTDFFRKLVNSRVEQREK  261 (499)
T ss_pred             hcccchhhhc---CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcccChHHHHHHHHHHHHHHHHHHHh
Confidence            9999998863   2344565545544443 111111    11122221110   11112233344455666666666633


Q ss_pred             hhcccCCCCCCCcchHHHHHHhhhhc---CCCCC-cCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHH
Q 010565          262 SAMSHEDNDQSDKKDLVYALLKLQKD---GKLGI-ELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQE  337 (507)
Q Consensus       262 ~~~~~~~~~~~~~~dll~~ll~~~~~---~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  337 (507)
                      .        ...+.|+++.+++.+.+   +.... .+|.++|+++++.+++||+||||+++++++|+||+|||+|+|+|+
T Consensus       262 ~--------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLre  333 (499)
T KOG0158|consen  262 E--------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLRE  333 (499)
T ss_pred             c--------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHH
Confidence            2        45788999999988753   11112 499999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCccccccccccccccc-CeeeCCCCEEEEehhhccCCCCCCCCC
Q 010565          338 EVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLG-GYDIPAKTIVYMNVWAIQRDPKVWDRA  416 (507)
Q Consensus       338 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p  416 (507)
                      ||+++..+...+|+|.+++|+||++||+||||+||+++. ..|.+++|++++ ++.||||+.|.++++++||||++||||
T Consensus       334 EI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~P  412 (499)
T KOG0158|consen  334 EIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEP  412 (499)
T ss_pred             HHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCc
Confidence            999997776669999999999999999999999999999 569999999999 999999999999999999999999999


Q ss_pred             CccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccC
Q 010565          417 EEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKH  496 (507)
Q Consensus       417 ~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (507)
                      ++|+||||.+++.+ ..++..|+|||.|||.|+|.+||++|+|+.|+.||++|+++..+... .. ......+++..|++
T Consensus       413 e~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~-~~-~~~~~~~~~l~pk~  489 (499)
T KOG0158|consen  413 EKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI-IP-LEGDPKGFTLSPKG  489 (499)
T ss_pred             ccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc-Cc-ccCCccceeeecCC
Confidence            99999999988644 55788999999999999999999999999999999999999988443 22 22233477789999


Q ss_pred             CeeEeeccCC
Q 010565          497 PLILMPTLYS  506 (507)
Q Consensus       497 ~~~v~~~~r~  506 (507)
                      ++.+++++|+
T Consensus       490 gi~Lkl~~r~  499 (499)
T KOG0158|consen  490 GIWLKLEPRD  499 (499)
T ss_pred             ceEEEEEeCC
Confidence            9999999985


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.6e-80  Score=612.74  Aligned_cols=470  Identities=38%  Similarity=0.737  Sum_probs=383.1

Q ss_pred             CCCCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcccccc
Q 010565           30 LNLPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVLL  109 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~  109 (507)
                      .+.||||.++|++||+..+..+++.++.+|+++||++|++++|++++++++||+++++++.++...|.+++.......+.
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~  112 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMA  112 (517)
T ss_pred             CCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhc
Confidence            45789999999999998887778999999999999999999999999999999999999998777777776443322222


Q ss_pred             cCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhc
Q 010565          110 YGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSVLG  189 (507)
Q Consensus       110 ~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG  189 (507)
                      ..+.+.+++.+|+.|+++|+.+..++|+.++++.+.+.++++++.+++.+.+.. +++++|+.++++.+++|+++.++||
T Consensus       113 ~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG  191 (517)
T PLN02687        113 YNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMVG  191 (517)
T ss_pred             cCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHhC
Confidence            223466777789999999999854889999999999999999999999997643 4567999999999999999999999


Q ss_pred             cccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010565          190 RRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMSHEDN  269 (507)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  269 (507)
                      .++..... +.....+.+................++|++.|+.. ....++..+..+.+.++++++++++++. ...   
T Consensus       192 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~-~~~---  265 (517)
T PLN02687        192 RRVFAGDG-DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAA-GQT---  265 (517)
T ss_pred             ccccccCC-cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc---
Confidence            98754211 12334566666665544333223345665544321 1234566677788889999999888754 110   


Q ss_pred             CCCCcchHHHHHHhhhhcC---CCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccC
Q 010565          270 DQSDKKDLVYALLKLQKDG---KLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNK  346 (507)
Q Consensus       270 ~~~~~~dll~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  346 (507)
                      ...+..|+++.|++...+.   ..+..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++++++
T Consensus       266 ~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  345 (517)
T PLN02687        266 GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD  345 (517)
T ss_pred             cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC
Confidence            0134569999999865431   1123699999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCcccCC
Q 010565          347 SSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFIN  426 (507)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  426 (507)
                      +.++++++++||||+|||+||||+||+++...+|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++
T Consensus       346 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~  425 (517)
T PLN02687        346 RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLP  425 (517)
T ss_pred             CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCC
Confidence            78899999999999999999999999999877899999999999999999999999999999999999999999999997


Q ss_pred             CCCC----CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEee
Q 010565          427 STID----FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMP  502 (507)
Q Consensus       427 ~~~~----~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  502 (507)
                      ++..    ....+..|+|||+|+|.|+|++||++|+++++|+||++|++++.++..+.+++.....++++.+..++++++
T Consensus       426 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (517)
T PLN02687        426 GGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHP  505 (517)
T ss_pred             CCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEee
Confidence            5321    112456899999999999999999999999999999999999987643334444445566667777999999


Q ss_pred             ccCC
Q 010565          503 TLYS  506 (507)
Q Consensus       503 ~~r~  506 (507)
                      ++|+
T Consensus       506 ~~R~  509 (517)
T PLN02687        506 RPRL  509 (517)
T ss_pred             ccCC
Confidence            9996


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.7e-80  Score=612.41  Aligned_cols=498  Identities=35%  Similarity=0.641  Sum_probs=398.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHH
Q 010565            6 LLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEIT   85 (507)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i   85 (507)
                      .++++++++.+++++++.+..++..+.||||+++|++||+..+..+++.++.+++++||++|++++++.++++++||+++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~   86 (514)
T PLN03112          7 SLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELI   86 (514)
T ss_pred             HHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHH
Confidence            34445555566677777777777778999999999999998887778999999999999999999999999999999999


Q ss_pred             HHHHHHcCccccCCCCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccC
Q 010565           86 RDIIKNHDIVFSNRPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLS  165 (507)
Q Consensus        86 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~  165 (507)
                      ++++.++...|.+++.........++...+++..+|+.|+++|+.+..++|+.++++.+.+.+.+.++.+++.+.+...+
T Consensus        87 ~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~  166 (514)
T PLN03112         87 REILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQT  166 (514)
T ss_pred             HHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhcc
Confidence            99998877778777654322222333344566778999999999976788999999999999999999999988765445


Q ss_pred             CCceeHHHHHHHHHHHHHHHHHhccccccccccC-cchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHH
Q 010565          166 RGSVSLAEMLQTVTNNIVSRSVLGRRVEEESTAG-GKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKAT  244 (507)
Q Consensus       166 ~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~  244 (507)
                      ++.+|+.+.++.+++++++.++||.++......+ +...++.+....+...........++|.+.++.. ....++..++
T Consensus       167 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~  245 (514)
T PLN03112        167 GKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREV  245 (514)
T ss_pred             CCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHH
Confidence            6789999999999999999999999875421111 1234566655555443332233445565544321 1334666777


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 010565          245 TREFDALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAE  324 (507)
Q Consensus       245 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  324 (507)
                      .+.+.++++..++++++. .+.... ..+..|+++.++++..+++ +..++++++.+++..+++||+|||+++++|++++
T Consensus       246 ~~~~~~~~~~~i~~~~~~-~~~~~~-~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~  322 (514)
T PLN03112        246 EKRVDEFHDKIIDEHRRA-RSGKLP-GGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAE  322 (514)
T ss_pred             HHHHHHHHHHHHHHHHHh-hccccc-CCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence            888888999999887654 211111 1234699999998653321 2258999999999999999999999999999999


Q ss_pred             HHhChHHHHHHHHHHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehh
Q 010565          325 LAKNPKLLKKAQEEVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVW  404 (507)
Q Consensus       325 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~  404 (507)
                      |++||++|+++++|+++++++++.++++++++||||+|||+||+|+||+++...+|.+.+|++++||.|||||.|.++++
T Consensus       323 L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~  402 (514)
T PLN03112        323 VIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTH  402 (514)
T ss_pred             HHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehH
Confidence            99999999999999999998777899999999999999999999999999987789999999999999999999999999


Q ss_pred             hccCCCCCCCCCCccCCcccCCCCCC--C--CCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCC
Q 010565          405 AIQRDPKVWDRAEEFLPERFINSTID--F--NGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDA  480 (507)
Q Consensus       405 ~~~~d~~~~~~p~~F~P~R~l~~~~~--~--~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~  480 (507)
                      ++||||++|+||++||||||..++..  .  ...+..|+|||+|+|.|+|++||++|+++++|+||++|+|++.++..+.
T Consensus       403 ~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~  482 (514)
T PLN03112        403 GLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPE  482 (514)
T ss_pred             HhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcc
Confidence            99999999999999999998754211  1  1234689999999999999999999999999999999999987654333


Q ss_pred             CCCcccccCccccccCCeeEeeccCCC
Q 010565          481 NLDMTEEYGLAVTKKHPLILMPTLYSP  507 (507)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~v~~~~r~~  507 (507)
                      ++.....++++..+++++.+.+.+|+.
T Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        483 DIDTQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             cCCCccccCcccccCCCeEEEeecCCc
Confidence            444545567777778899999999963


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.6e-80  Score=612.78  Aligned_cols=469  Identities=27%  Similarity=0.495  Sum_probs=370.8

Q ss_pred             CCCCCCCCCCCCccccccCCCCC--CchhHHHHHhhcC-CeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcc
Q 010565           29 KLNLPPSPPGLPIIGNLHQLGSL--PHRSLKDLSSKYG-PLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAG  105 (507)
Q Consensus        29 ~~~~~Pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  105 (507)
                      +.+.||||+++|++||+..+..+  .+.++.+|.++|| +||++++|++++|||+||+++++++.++...|.+++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            45689999999999999887332  3677899999999 89999999999999999999999999888888888754333


Q ss_pred             cccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010565          106 DVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSR  185 (507)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                      ..+..+..+.++..+|+.|+++|+++..+++++..++.+.+.+.++++.+++.+.+...+++++|+.+.+.+++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            22222223457778899999999999767787777788889999999999888876544556799999999999999999


Q ss_pred             HHhccccccccc--cCcchhHHHHHHHHHHHHhc---CCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010565          186 SVLGRRVEEEST--AGGKSNKFGELSKRLLIQLG---SISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHR  260 (507)
Q Consensus       186 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  260 (507)
                      ++||.++.....  .++...++...++..+....   .....+++|++.++. ..+..+...++.+.+.+++++.+++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998743210  01111223333444333221   112334556554432 123344566667778888999988876


Q ss_pred             HhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 010565          261 ISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVR  340 (507)
Q Consensus       261 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  340 (507)
                      +. .+...  .....|+++.|++...+++ ...++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||+
T Consensus       294 ~~-~~~~~--~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        294 KM-WREGK--RTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HH-HhccC--CCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            53 11011  1234699999998643321 12499999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccC
Q 010565          341 RVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFL  420 (507)
Q Consensus       341 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  420 (507)
                      +++++++.++++++++||||+|||+|+||+||+++...+|.+.+|++++||.|||||.|+++.|++||||++|+||++|+
T Consensus       370 ~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~  449 (543)
T PLN02971        370 RVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFK  449 (543)
T ss_pred             HHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccC
Confidence            99988788999999999999999999999999999877899999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCC--CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCe
Q 010565          421 PERFINSTID--FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPL  498 (507)
Q Consensus       421 P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (507)
                      ||||+++..+  ....+..|+|||+|+|.|+|++||++|+++++|.||++|+|++.++..  +++....++ +...++++
T Consensus       450 PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~~~~  526 (543)
T PLN02971        450 PERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFLSKPL  526 (543)
T ss_pred             cccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-cccccccc
Confidence            9999975322  123456899999999999999999999999999999999999877543  345555556 66556699


Q ss_pred             eEeeccC
Q 010565          499 ILMPTLY  505 (507)
Q Consensus       499 ~v~~~~r  505 (507)
                      .+.+++|
T Consensus       527 ~~~~~~~  533 (543)
T PLN02971        527 VMVGELR  533 (543)
T ss_pred             eeeeeec
Confidence            9999988


No 7  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4e-80  Score=608.19  Aligned_cols=478  Identities=36%  Similarity=0.661  Sum_probs=375.0

Q ss_pred             HHHhhcCCCCCCCCCCCCCCccccccCC-CCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCC
Q 010565           21 LKLSRNKSKLNLPPSPPGLPIIGNLHQL-GSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNR   99 (507)
Q Consensus        21 ~~~~~~~~~~~~~Pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~   99 (507)
                      ++.+..++..+.||||+++|++||++.+ ..+++.++.+|+++||++|++++|+.++++|+||+++++|+.++...|.++
T Consensus        19 ~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~   98 (502)
T PLN02966         19 LYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADR   98 (502)
T ss_pred             HHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCC
Confidence            3444444446789999999999999887 456889999999999999999999999999999999999999877666665


Q ss_pred             CCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHH
Q 010565          100 PKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVT  179 (507)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~  179 (507)
                      +..........+.....+..+|+.|+++|+.+..++|+..+++.+.+.+.+.++.+++.|.+...+++.+|+.+++..++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t  178 (502)
T PLN02966         99 PPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFT  178 (502)
T ss_pred             CCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHH
Confidence            54332222222333344566799999999995578999999999999999999999999987655567899999999999


Q ss_pred             HHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 010565          180 NNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEH  259 (507)
Q Consensus       180 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~  259 (507)
                      +|+++.++||.+++..   ++...++.+........+.......++|++..+..++...+....+.+...+++++.++++
T Consensus       179 ~dvi~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (502)
T PLN02966        179 NSVVCRQAFGKKYNED---GEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNET  255 (502)
T ss_pred             HHHHHHHHhCCccCcc---chHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988753   1123345554444443333333344555433221112223333445566677777777665


Q ss_pred             HHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHH
Q 010565          260 RISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEV  339 (507)
Q Consensus       260 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (507)
                      ... .    ....+..|+++.|++...++..+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       256 ~~~-~----~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei  330 (502)
T PLN02966        256 LDP-K----RVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEV  330 (502)
T ss_pred             Hhc-c----ccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            432 1    00123468999999765443222369999999999999999999999999999999999999999999999


Q ss_pred             HHHhccC--CCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCC-CCC
Q 010565          340 RRVVKNK--SSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVW-DRA  416 (507)
Q Consensus       340 ~~~~~~~--~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p  416 (507)
                      +++++++  +.++++++++||||+|||+|+||+||+++..++|.+.+|++++||.|||||.|.++++++||||++| |||
T Consensus       331 ~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP  410 (502)
T PLN02966        331 REYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNP  410 (502)
T ss_pred             HHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCCh
Confidence            9998753  3578999999999999999999999999987789999999999999999999999999999999999 999


Q ss_pred             CccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccC
Q 010565          417 EEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKH  496 (507)
Q Consensus       417 ~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (507)
                      ++|+||||++++.+....+..|+|||+|+|+|+|++||.+|+++++|.||++|+|++.++..+++++.+...++...++.
T Consensus       411 ~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~  490 (502)
T PLN02966        411 DEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQ  490 (502)
T ss_pred             hhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCC
Confidence            99999999975432223456899999999999999999999999999999999999988765455665666676654555


Q ss_pred             CeeEeeccCC
Q 010565          497 PLILMPTLYS  506 (507)
Q Consensus       497 ~~~v~~~~r~  506 (507)
                      ++.+..++.+
T Consensus       491 ~~~~~~~~~~  500 (502)
T PLN02966        491 HLKLVPEKVN  500 (502)
T ss_pred             CeEEEEEeCC
Confidence            7766655543


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=6.4e-80  Score=604.45  Aligned_cols=465  Identities=37%  Similarity=0.717  Sum_probs=380.4

Q ss_pred             CCCCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcccccc
Q 010565           30 LNLPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVLL  109 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~  109 (507)
                      .+.||||+++|++||+..+...++.++.+++++||+||++++|++++|+|+||+++++++.++...|..++.........
T Consensus        30 ~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~  109 (504)
T PLN00110         30 RKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLA  109 (504)
T ss_pred             CCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhc
Confidence            45799999999999998887678899999999999999999999999999999999999998777787776543222223


Q ss_pred             cCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhc
Q 010565          110 YGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSVLG  189 (507)
Q Consensus       110 ~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG  189 (507)
                      .++.+.+++.+|+.|+++|+.++.++|+.++++.+.+.+.+++..+++.+.+...+++++|+.+++..+++|+++.++||
T Consensus       110 ~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg  189 (504)
T PLN00110        110 YGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILS  189 (504)
T ss_pred             cCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhC
Confidence            33455677788999999999986568999999999999999999999999876556778999999999999999999999


Q ss_pred             cccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010565          190 RRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMSHEDN  269 (507)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  269 (507)
                      .++...  .+....++...+..............++|++.|+.. ....++..+..+.+.+++.+.++++++. .    .
T Consensus       190 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~----~  261 (504)
T PLN00110        190 RRVFET--KGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDI-QGIERGMKHLHKKFDKLLTRMIEEHTAS-A----H  261 (504)
T ss_pred             Cccccc--CchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCc-chHHHHHHHHHHHHHHHHHHHHHHHHhh-c----c
Confidence            987321  111334566666665544333333455665554321 1234556667777888888888877653 1    1


Q ss_pred             CCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccCCCC
Q 010565          270 DQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNKSSI  349 (507)
Q Consensus       270 ~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  349 (507)
                      ......|+++.+++...+.. +..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+++++++++.+
T Consensus       262 ~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  340 (504)
T PLN00110        262 ERKGNPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRL  340 (504)
T ss_pred             ccccCCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence            01234689999997643221 23699999999999999999999999999999999999999999999999999877778


Q ss_pred             CcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCcccCCCCC
Q 010565          350 NMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFINSTI  429 (507)
Q Consensus       350 ~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  429 (507)
                      +++++++||||+|||+||||+||+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++.
T Consensus       341 ~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~  420 (504)
T PLN00110        341 VESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKN  420 (504)
T ss_pred             CHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCC
Confidence            99999999999999999999999999877899999999999999999999999999999999999999999999997532


Q ss_pred             CCC---CCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEeeccCC
Q 010565          430 DFN---GQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMPTLYS  506 (507)
Q Consensus       430 ~~~---~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  506 (507)
                      ...   ..+..|+|||+|+|.|+|++||++|+++++|+|+++|++++.++.   +++.....+++..++.++++++++|+
T Consensus       421 ~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        421 AKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             cccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEeeccCC
Confidence            211   123579999999999999999999999999999999999987653   23333456777888899999999985


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.2e-79  Score=606.38  Aligned_cols=466  Identities=37%  Similarity=0.725  Sum_probs=371.8

Q ss_pred             CCCCCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCccccc
Q 010565           29 KLNLPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVL  108 (507)
Q Consensus        29 ~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~  108 (507)
                      ..+.||||+++|++|+++.+....+..+.+|+++||++|++++|+.++|+|+||+++++|+.++...|..++........
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~  113 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYL  113 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcc
Confidence            35789999999999999887656678899999999999999999999999999999999999877777777653322222


Q ss_pred             ccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHh
Q 010565          109 LYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSVL  188 (507)
Q Consensus       109 ~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~f  188 (507)
                      ..++.+.+++.+|+.|+++|+.+..++|+.+.++.+.+.+ ++++.+++.+.+.  .++++|+.+.+..+++|+++.++|
T Consensus       114 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~~~f  190 (516)
T PLN02183        114 TYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYRAAF  190 (516)
T ss_pred             ccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHhHhh
Confidence            2223456777889999999998557899999999988864 6789999998652  467899999999999999999999


Q ss_pred             ccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 010565          189 GRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMSHED  268 (507)
Q Consensus       189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  268 (507)
                      |.+.+.      ...++.+....+...+.......++|++.++.. ....++..++.+.+.+++.++++++.++......
T Consensus       191 G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  263 (516)
T PLN02183        191 GSSSNE------GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNA  263 (516)
T ss_pred             cCcccc------hHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            997653      234566666555444443334456665544311 1235567777888888888888877643111100


Q ss_pred             --CCCCCcchHHHHHHhhhhcCC---------CCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHH
Q 010565          269 --NDQSDKKDLVYALLKLQKDGK---------LGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQE  337 (507)
Q Consensus       269 --~~~~~~~dll~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  337 (507)
                        .......|+++.+++...+..         ....++++++..++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       264 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  343 (516)
T PLN02183        264 DNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQ  343 (516)
T ss_pred             ccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence              001234689999997543210         112589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCC
Q 010565          338 EVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAE  417 (507)
Q Consensus       338 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  417 (507)
                      |++++++.++.++++++++||||+|||+||||+||++|+. .|.+.+|++++||.|||||.|.++.+++||||++|+||+
T Consensus       344 Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~  422 (516)
T PLN02183        344 ELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPD  422 (516)
T ss_pred             HHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcc
Confidence            9999998666789999999999999999999999999996 499999999999999999999999999999999999999


Q ss_pred             ccCCcccCCCCCC-CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccC
Q 010565          418 EFLPERFINSTID-FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKH  496 (507)
Q Consensus       418 ~F~P~R~l~~~~~-~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (507)
                      +|+||||++++.. ...++..|+|||+|+|.|+|++||++|+++++|+|+++|++++.++..+.+++....++.+....+
T Consensus       423 ~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (516)
T PLN02183        423 TFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRAT  502 (516)
T ss_pred             ccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCC
Confidence            9999999975432 123456899999999999999999999999999999999999977643333444445565544556


Q ss_pred             CeeEeeccC
Q 010565          497 PLILMPTLY  505 (507)
Q Consensus       497 ~~~v~~~~r  505 (507)
                      ++.+.+++|
T Consensus       503 ~~~~~~~~r  511 (516)
T PLN02183        503 RLVAVPTYR  511 (516)
T ss_pred             CcEEEeecC
Confidence            888888877


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=8.4e-79  Score=597.47  Aligned_cols=477  Identities=25%  Similarity=0.415  Sum_probs=371.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHH
Q 010565            6 LLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEIT   85 (507)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i   85 (507)
                      +.+++.+++.+++...+.+..+...+.+|||+++|++||+..+..+++..+.+++++||++|++++|+.++|+++||+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~   83 (482)
T PTZ00404          4 FNIILFLFIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILI   83 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHH
Confidence            44444444555544444444445567899999999999998887788999999999999999999999999999999999


Q ss_pred             HHHHHHcCccccCCCCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccC
Q 010565           86 RDIIKNHDIVFSNRPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLS  165 (507)
Q Consensus        86 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~  165 (507)
                      ++++.++...|..++.........+ +.+ +++.+|+.|+++|+++ .+.|+...++.+.+.+.+.++.+++.|.+....
T Consensus        84 ~~il~~~~~~~~~r~~~~~~~~~~~-~~~-l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  160 (482)
T PTZ00404         84 REMFVDNFDNFSDRPKIPSIKHGTF-YHG-IVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESS  160 (482)
T ss_pred             HHHHHhcchhhcCCCCcceeeeecc-CCc-eeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999977666666654433221112 334 4566799999999998 789999999999999999999999999865445


Q ss_pred             CCceeHHHHHHHHHHHHHHHHHhcccccccccc-CcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHH
Q 010565          166 RGSVSLAEMLQTVTNNIVSRSVLGRRVEEESTA-GGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKAT  244 (507)
Q Consensus       166 ~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~  244 (507)
                      ++.+|+.+++.++++|+++.++||.+++..... ++...++.+....++..+.......+++++....  ........+.
T Consensus       161 ~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  238 (482)
T PTZ00404        161 GETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY--YQYLEHTDKN  238 (482)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh--HHHHHHHHHH
Confidence            667999999999999999999999988643110 1122455555555554433222222222222110  0112233445


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 010565          245 TREFDALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAE  324 (507)
Q Consensus       245 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  324 (507)
                      .+.+.+++++.++++++. .   +  .....|+++.|+++..+..   ....+++.+++..+++||+|||+++++|++++
T Consensus       239 ~~~~~~~~~~~i~~~~~~-~---~--~~~~~dll~~ll~~~~~~~---~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~  309 (482)
T PTZ00404        239 FKKIKKFIKEKYHEHLKT-I---D--PEVPRDLLDLLIKEYGTNT---DDDILSILATILDFFLAGVDTSATSLEWMVLM  309 (482)
T ss_pred             HHHHHHHHHHHHHHHHHc-c---C--CCCcccHHHHHHHHhccCC---cccHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            667777777777665543 1   1  2235699999997642211   22334588999999999999999999999999


Q ss_pred             HHhChHHHHHHHHHHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccc-cCeeeCCCCEEEEeh
Q 010565          325 LAKNPKLLKKAQEEVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNL-GGYDIPAKTIVYMNV  403 (507)
Q Consensus       325 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~  403 (507)
                      |++||++|+|+++|+++++++++.++++++++||||+|||+||||+||+++...+|.+.+|+++ +||.|||||.|.+++
T Consensus       310 L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~  389 (482)
T PTZ00404        310 LCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINY  389 (482)
T ss_pred             HHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeH
Confidence            9999999999999999999876778999999999999999999999999998678999999999 999999999999999


Q ss_pred             hhccCCCCCCCCCCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCC
Q 010565          404 WAIQRDPKVWDRAEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLD  483 (507)
Q Consensus       404 ~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~  483 (507)
                      +++||||++||||++|+||||+++.     .+..|+|||+|+|.|+|++||++|++++++.||++|++++.++..   .+
T Consensus       390 ~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~  461 (482)
T PTZ00404        390 YSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---ID  461 (482)
T ss_pred             HHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CC
Confidence            9999999999999999999999752     356899999999999999999999999999999999999876532   12


Q ss_pred             cccccCccccccCCeeEeeccC
Q 010565          484 MTEEYGLAVTKKHPLILMPTLY  505 (507)
Q Consensus       484 ~~~~~~~~~~~~~~~~v~~~~r  505 (507)
                      .....++++. +.+++|.+++|
T Consensus       462 ~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        462 ETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cccccceeec-CCCceeeeecC
Confidence            2234566666 45899999887


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.4e-78  Score=595.63  Aligned_cols=469  Identities=26%  Similarity=0.457  Sum_probs=366.4

Q ss_pred             CCCCCCCCCCCCCccccccCCC---CCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCc
Q 010565           28 SKLNLPPSPPGLPIIGNLHQLG---SLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTA  104 (507)
Q Consensus        28 ~~~~~~Pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~  104 (507)
                      +..++||||+++|++||+..+.   ..++..+.+|+++||++|++++|+.++++|+||+++++++.++...|.+++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            4457899999999999987653   3467889999999999999999999999999999999999988777777765332


Q ss_pred             ccccccCCCceee-cCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHH
Q 010565          105 GDVLLYGSKDIGF-SSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIV  183 (507)
Q Consensus       105 ~~~~~~~~~~~~~-~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i  183 (507)
                      ...+.. +.+++. ..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.+.+....++.+|+.+.+..++.+++
T Consensus       112 ~~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        112 SRLLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             hhhhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            222211 122332 367999999998555899999999999999999999999999875444457899999999999999


Q ss_pred             HHHHhccccccccccCcchhHHHHHHHHHHHHh-cCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010565          184 SRSVLGRRVEEESTAGGKSNKFGELSKRLLIQL-GSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRIS  262 (507)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  262 (507)
                      +.++||.+++..     ....+........... .......++|.+.+.. .....++..++.+.+.+++.++++++++.
T Consensus       191 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        191 VLMCFGERLDEP-----AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHHcCCCcChh-----hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987632     2223333333222211 1222334555433221 11234556667888899999999887654


Q ss_pred             hcc--cCC-CC---CCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHH
Q 010565          263 AMS--HED-ND---QSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQ  336 (507)
Q Consensus       263 ~~~--~~~-~~---~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  336 (507)
                      ...  ... ..   .....|+++.|++....+..+..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            110  000 00   011458999999765322222369999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccC-CCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCC
Q 010565          337 EEVRRVVKNK-SSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDR  415 (507)
Q Consensus       337 ~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  415 (507)
                      +|++++++++ +.++++++++||||+|||+||||+||+++..++|.+.+|++++||.|||||.|.++.+++||||++|||
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            9999999753 568999999999999999999999999998878999999999999999999999999999999999999


Q ss_pred             CCccCCcccCCCCCC-----CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCc
Q 010565          416 AEEFLPERFINSTID-----FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGL  490 (507)
Q Consensus       416 p~~F~P~R~l~~~~~-----~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  490 (507)
                      |++|+||||++++..     ....+..|+|||+|+|.|+|++||++|+++++++||++|+|++.++..   ++.....++
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~  501 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKREF  501 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhcee
Confidence            999999999974211     112346899999999999999999999999999999999999976532   222223345


Q ss_pred             cccccCCeeEeeccCC
Q 010565          491 AVTKKHPLILMPTLYS  506 (507)
Q Consensus       491 ~~~~~~~~~v~~~~r~  506 (507)
                      +..++.+++|++++|+
T Consensus       502 ~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        502 TTVMAKPLRARLVPRR  517 (519)
T ss_pred             EEeecCCcEEEEEecc
Confidence            5666778999999997


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.1e-77  Score=592.72  Aligned_cols=470  Identities=29%  Similarity=0.535  Sum_probs=358.6

Q ss_pred             cCCCCCCCCCCCCCCccccccCCCCC-CchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCc
Q 010565           26 NKSKLNLPPSPPGLPIIGNLHQLGSL-PHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTA  104 (507)
Q Consensus        26 ~~~~~~~~Pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~  104 (507)
                      .+++.+.||||+++|++|++..+.++ .+..+.+|+++||+||++++|++++|+|+||+.+++++.++...+.+++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            33446789999999999999888544 46889999999999999999999999999999999999877666666654333


Q ss_pred             ccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhcc-CCCceeHHHHHHHHHHHHH
Q 010565          105 GDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCL-SRGSVSLAEMLQTVTNNIV  183 (507)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~-~~~~vd~~~~~~~~~~~~i  183 (507)
                      ...+...+.+.+++.+|+.|+++|+.+..++|+.+.++.+.+.++++++.+++++.+... .++.+|+.+.+..+++|++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            332221234566777899999999998558999999999999999999999999976532 2446999999999999999


Q ss_pred             HHHHhccccccccccCcchhHHHHHHHHHHHHhcC--CccccccccccccccccchHHHHHHHHHHHHH-HHHHHHHHHH
Q 010565          184 SRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGS--ISFRDLFPSFGWLDVVTGHIGRLKATTREFDA-LFDQVIEEHR  260 (507)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~-~~~~~i~~~~  260 (507)
                      +.++||.+++...  ++....+.....+.......  .....++|++.+.  .....+..........+ +.+..+++++
T Consensus       185 ~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (503)
T PLN02394        185 YRMMFDRRFESED--DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERK  260 (503)
T ss_pred             HHHHhCCCccccc--chhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987531  11122222222222222111  1122333433211  01112222222222222 3334555554


Q ss_pred             HhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 010565          261 ISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVR  340 (507)
Q Consensus       261 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  340 (507)
                      +. .+..........|+++.|++...++    .++++++..++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus       261 ~~-~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  335 (503)
T PLN02394        261 KL-MSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELD  335 (503)
T ss_pred             HH-hhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            32 1100001223468999999865432    589999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccC
Q 010565          341 RVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFL  420 (507)
Q Consensus       341 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  420 (507)
                      ++++.++.++++++++||||+|||+||||++|+++...+|.+.+|++++||.||+||.|.++++++||||++|+||++|+
T Consensus       336 ~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~  415 (503)
T PLN02394        336 TVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFR  415 (503)
T ss_pred             HHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccC
Confidence            99987667899999999999999999999999999988899999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCC--CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccC-ccccccCC
Q 010565          421 PERFINSTID--FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYG-LAVTKKHP  497 (507)
Q Consensus       421 P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  497 (507)
                      ||||++++..  .......|+|||+|+|.|+|++||++|+++++|.|+++|++++.++..  +++....++ +....+.+
T Consensus       416 PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~  493 (503)
T PLN02394        416 PERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKH  493 (503)
T ss_pred             ccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCC
Confidence            9999975421  122456899999999999999999999999999999999999877642  233443343 55545559


Q ss_pred             eeEeeccCC
Q 010565          498 LILMPTLYS  506 (507)
Q Consensus       498 ~~v~~~~r~  506 (507)
                      +++++.+|+
T Consensus       494 ~~~~~~~r~  502 (503)
T PLN02394        494 STVVFKPRS  502 (503)
T ss_pred             ceEEeecCC
Confidence            999999997


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.8e-77  Score=590.30  Aligned_cols=454  Identities=22%  Similarity=0.335  Sum_probs=355.9

Q ss_pred             CCCCCCCCCCCccccccCCC-------------------CCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHH
Q 010565           30 LNLPPSPPGLPIIGNLHQLG-------------------SLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIK   90 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~~-------------------~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~   90 (507)
                      ...||||+++|++||++.+.                   ......+.+|+++||++|++++|+.++|+++||+++++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            45699999999999987763                   22334568899999999999999999999999999999998


Q ss_pred             HcCccccCCCCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCC-Cce
Q 010565           91 NHDIVFSNRPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSR-GSV  169 (507)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~-~~v  169 (507)
                      ++.. +..++...........+.+ ++..+|+.|+++|+.+ .+.|+.++++.+.+.+.++++.+++.+.+....+ +.+
T Consensus       121 ~~~~-~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        121 KYNT-VTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             cCCC-CCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            7633 3344322111111111344 4556799999999998 7899999999999999999999999998654333 579


Q ss_pred             eHHHHHHHHHHHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHH
Q 010565          170 SLAEMLQTVTNNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFD  249 (507)
Q Consensus       170 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~  249 (507)
                      |+.+.+..+++|++++++||.+++..       +++......+............+|++.++.  ....++..+..+.+.
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~  268 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKG-------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVE  268 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccc-------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHH
Confidence            99999999999999999999987531       223333333222211111112234333221  123455666777888


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcC-CCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhC
Q 010565          250 ALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDG-KLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKN  328 (507)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  328 (507)
                      +++++.++++++. .+.+.+ .....|+++.+++...+. ..+..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       269 ~~~~~~i~~~~~~-~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~  346 (516)
T PLN02290        269 RLLMEIIQSRRDC-VEIGRS-SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASN  346 (516)
T ss_pred             HHHHHHHHHHHHH-hhcccC-CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            9999999888754 211111 223579999999764322 1123588999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccC
Q 010565          329 PKLLKKAQEEVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQR  408 (507)
Q Consensus       329 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~  408 (507)
                      |++|+|+++|++++++++ .++++++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|+++.+++||
T Consensus       347 P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~r  424 (516)
T PLN02290        347 PTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHH  424 (516)
T ss_pred             HHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcC
Confidence            999999999999998864 78999999999999999999999999997 5899999999999999999999999999999


Q ss_pred             CCCCC-CCCCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccc
Q 010565          409 DPKVW-DRAEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEE  487 (507)
Q Consensus       409 d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  487 (507)
                      ||++| +||++|+||||++++   ......|+|||.|+|.|+|++||++|+++++++||++|++++.++..     ....
T Consensus       425 dp~~~~~dP~~F~PeRfl~~~---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~  496 (516)
T PLN02290        425 SEELWGKDANEFNPDRFAGRP---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPV  496 (516)
T ss_pred             ChhhhCCChhhcCccccCCCC---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCcc
Confidence            99999 899999999999542   12345799999999999999999999999999999999999876532     1112


Q ss_pred             cCccccccCCeeEeeccCCC
Q 010565          488 YGLAVTKKHPLILMPTLYSP  507 (507)
Q Consensus       488 ~~~~~~~~~~~~v~~~~r~~  507 (507)
                      .+++..|+.+++|++++|+|
T Consensus       497 ~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        497 VVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             ceeeecCCCCCeEEEEeCCC
Confidence            35778999999999999997


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.5e-77  Score=580.79  Aligned_cols=456  Identities=29%  Similarity=0.472  Sum_probs=364.3

Q ss_pred             CCCCCCCCCCCCccccccCCCC---CCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcc
Q 010565           29 KLNLPPSPPGLPIIGNLHQLGS---LPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAG  105 (507)
Q Consensus        29 ~~~~~Pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  105 (507)
                      ....||||+++|++|++.++.+   ....++.++..+||++|+.|+||.++++++||+.+++|+.++...+.+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            4567999999999999998843   4667888999999999999999999999999999999997655444444433322


Q ss_pred             cccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010565          106 DVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSR  185 (507)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                      ..-.+ |.+++++. |+.|+++||++ .++|+.+.++.+...+.+.+..++..+..... ++.+|+.+.++++++|+++.
T Consensus       113 ~~~~l-G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LKPWL-GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHh-cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHHH
Confidence            11122 45666666 99999999998 89999999999999999999998888877432 33399999999999999999


Q ss_pred             HHhcccc-ccccccCcchhHHHHHHHHHHHHhcCCccccccc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010565          186 SVLGRRV-EEESTAGGKSNKFGELSKRLLIQLGSISFRDLFP-SFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISA  263 (507)
Q Consensus       186 ~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  263 (507)
                      ++||... +..   .+...++..++......+.   .+...| +..++..+ ...++..++.+.++++++++|++|+++.
T Consensus       189 ~~~G~~~~~~~---~~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~  261 (497)
T KOG0157|consen  189 TAMGPESLDAE---GPELFEYVQAFDDLTELIS---KRINLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREEL  261 (497)
T ss_pred             HhcCCcccccc---CCcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999322 211   2234456666665443332   223334 33333222 2678899999999999999999998752


Q ss_pred             cccCCCC-CCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Q 010565          264 MSHEDND-QSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRV  342 (507)
Q Consensus       264 ~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  342 (507)
                      . ..+.. ..+..|+++.+.... +    ..+++++|++++.++++||+|||+++++|++++|+.||++|+++++|++++
T Consensus       262 ~-~~~~~~~~~~~d~L~~~~~~~-~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i  335 (497)
T KOG0157|consen  262 E-KEGSGEEKKRLDFLDTLLLEE-D----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEI  335 (497)
T ss_pred             H-hcCCcccchhhhHHHHHHHhc-c----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            2 11111 245678888633222 2    379999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCC-CcccCCCcccHHHHHHhhcCCCCCCccccccccccccccc-CeeeCCCCEEEEehhhccCCCCCCC-CCCcc
Q 010565          343 VKNKSSI-NMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLG-GYDIPAKTIVYMNVWAIQRDPKVWD-RAEEF  419 (507)
Q Consensus       343 ~~~~~~~-~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F  419 (507)
                      ++++... +....++|+||++||+||||||||+|.. .|.+.+|++++ ||.||||+.|+++++++|||+.+|+ ||++|
T Consensus       336 ~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F  414 (497)
T KOG0157|consen  336 LGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEF  414 (497)
T ss_pred             hCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhc
Confidence            9754332 2223336999999999999999999996 59999999994 8999999999999999999999996 99999


Q ss_pred             CCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCee
Q 010565          420 LPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLI  499 (507)
Q Consensus       420 ~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (507)
                      |||||+++......++++|+|||+|+|.|+|++||++|||++++.||++|+|++..+..     ......++++++++++
T Consensus       415 ~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~  489 (497)
T KOG0157|consen  415 DPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLK  489 (497)
T ss_pred             CccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeE
Confidence            99999976443355689999999999999999999999999999999999999987742     4456688899999999


Q ss_pred             EeeccCCC
Q 010565          500 LMPTLYSP  507 (507)
Q Consensus       500 v~~~~r~~  507 (507)
                      |++++|+.
T Consensus       490 v~~~~r~~  497 (497)
T KOG0157|consen  490 VKLRPRGS  497 (497)
T ss_pred             EEEEeCCC
Confidence            99999974


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.8e-75  Score=569.78  Aligned_cols=457  Identities=26%  Similarity=0.460  Sum_probs=362.0

Q ss_pred             CCCCCCCCccccccCCC-CCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcccccccC
Q 010565           33 PPSPPGLPIIGNLHQLG-SLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVLLYG  111 (507)
Q Consensus        33 ~Pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  111 (507)
                      ||||+++|++||++.+. .+++..+.+|+++||++|++++|++++++|+||+++++++.++...|.+++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998884 55889999999999999999999999999999999999999887777776543322222111


Q ss_pred             CCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhcc--CCCceeHHHHHHHHHHHHHHHHHhc
Q 010565          112 SKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCL--SRGSVSLAEMLQTVTNNIVSRSVLG  189 (507)
Q Consensus       112 ~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~--~~~~vd~~~~~~~~~~~~i~~~~fG  189 (507)
                      +..+.+..+|+.|+++|+.+.+++|+...++.+.+.+.+.++.+++.+.+...  .++.+|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22233445699999999887778898888899999999999999988876533  3567999999999999999999999


Q ss_pred             cccccccccC--cc---hhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010565          190 RRVEEESTAG--GK---SNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAM  264 (507)
Q Consensus       190 ~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  264 (507)
                      .+++.....+  ..   ...+.................+.+|.+.++.. ....++..+....+.++++.++++++++ .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~  238 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKR-I  238 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence            9877531100  00   11233333333333322233456676555421 1122333334444567888888776654 1


Q ss_pred             ccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhc
Q 010565          265 SHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVK  344 (507)
Q Consensus       265 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  344 (507)
                      ..    ..+..|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++
T Consensus       239 ~~----~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        239 AR----GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             cC----CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            11    223458999999753      25899999999999999999999999999999999999999999999999988


Q ss_pred             cCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCccc
Q 010565          345 NKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERF  424 (507)
Q Consensus       345 ~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~  424 (507)
                      ++. ++++++++||||+|||+||||+||+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  387 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERF  387 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcccc
Confidence            654 8999999999999999999999999999878999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEeecc
Q 010565          425 INSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMPTL  504 (507)
Q Consensus       425 l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  504 (507)
                      +++... ......++|||+|+|.|+|++||..|+++++++||++|++++.++.. .   .....+++..++++++|.+++
T Consensus       388 ~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~  462 (466)
T PLN02655        388 LGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHLKP  462 (466)
T ss_pred             CCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEEee
Confidence            976422 12346899999999999999999999999999999999999976642 1   123456777888999999999


Q ss_pred             CCC
Q 010565          505 YSP  507 (507)
Q Consensus       505 r~~  507 (507)
                      |+.
T Consensus       463 r~~  465 (466)
T PLN02655        463 RGS  465 (466)
T ss_pred             cCC
Confidence            863


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.4e-75  Score=572.09  Aligned_cols=438  Identities=22%  Similarity=0.367  Sum_probs=338.0

Q ss_pred             CCCCCCCCCCCCCCccccccCCC-----CCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCC
Q 010565           27 KSKLNLPPSPPGLPIIGNLHQLG-----SLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPK  101 (507)
Q Consensus        27 ~~~~~~~Pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~  101 (507)
                      ++..+.||||+++|++||+..+.     +.++.++.+++++||++|++++|++++|+++||+++++++.+++..|..+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            34456899999999999976431     3566788999999999999999999999999999999999977665643321


Q ss_pred             CCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhh-hHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHH
Q 010565          102 TTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQS-LHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTN  180 (507)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~-~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~  180 (507)
                      .... . ..++.+ ++..+|+.|+++|+++ .+.|+..+++. +.+.+.+.+..+++.+.    .++.+|+.+.++.+++
T Consensus       114 ~~~~-~-~~g~~~-~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~  185 (490)
T PLN02500        114 RSIG-G-ILGKWS-MLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFTF  185 (490)
T ss_pred             hHHH-H-HhCccc-ccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHHH
Confidence            1111 1 122223 3445799999999998 68899888887 56777777777777664    2457999999999999


Q ss_pred             HHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010565          181 NIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHR  260 (507)
Q Consensus       181 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  260 (507)
                      +++++++||.+.+..     ...++.............  ....+|.        ...++..++.+.+.+++++.+++++
T Consensus       186 ~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~~~  250 (490)
T PLN02500        186 NLMAKHIMSMDPGEE-----ETEQLKKEYVTFMKGVVS--APLNFPG--------TAYRKALKSRATILKFIERKMEERI  250 (490)
T ss_pred             HHHHHHHhCCCCCch-----HHHHHHHHHHHHHhhhhc--chhcCCC--------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999975431     222333333333222111  1111221        1234556677888888999988876


Q ss_pred             HhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 010565          261 ISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVR  340 (507)
Q Consensus       261 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  340 (507)
                      ++ .+.++. .....|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       251 ~~-~~~~~~-~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~  321 (490)
T PLN02500        251 EK-LKEEDE-SVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHL  321 (490)
T ss_pred             Hh-hhcccC-CCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence            54 111111 12346899999863       1589999999999999999999999999999999999999999999999


Q ss_pred             HHhc-----cCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCC
Q 010565          341 RVVK-----NKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDR  415 (507)
Q Consensus       341 ~~~~-----~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  415 (507)
                      ++++     .++.++++++++||||+|||+||||+||+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+|
T Consensus       322 ~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~d  400 (490)
T PLN02500        322 EIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQ  400 (490)
T ss_pred             HHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCC
Confidence            9874     234589999999999999999999999999985 6999999999999999999999999999999999999


Q ss_pred             CCccCCcccCCCCCCCC------CCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccC
Q 010565          416 AEEFLPERFINSTIDFN------GQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYG  489 (507)
Q Consensus       416 p~~F~P~R~l~~~~~~~------~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  489 (507)
                      |++|+||||++++....      ..+..|+|||+|+|.|+|++||++|+++++|+||++|+|++.++..  .  ..  ..
T Consensus       401 P~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~--~~--~~  474 (490)
T PLN02500        401 PQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--A--FA--FP  474 (490)
T ss_pred             ccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--c--ee--cc
Confidence            99999999997542211      2456899999999999999999999999999999999999877642  1  11  12


Q ss_pred             ccccccCCeeEeecc
Q 010565          490 LAVTKKHPLILMPTL  504 (507)
Q Consensus       490 ~~~~~~~~~~v~~~~  504 (507)
                      .+ .++.++.|++.+
T Consensus       475 ~~-~~~~~l~~~~~~  488 (490)
T PLN02500        475 FV-DFPKGLPIRVRR  488 (490)
T ss_pred             cc-cCCCCceEEEEe
Confidence            22 334588888764


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=9.7e-74  Score=561.34  Aligned_cols=470  Identities=24%  Similarity=0.401  Sum_probs=353.3

Q ss_pred             CCCCCCCCCCCccccccCCC-CCCc-hhHHHHHhhc-CCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCccc
Q 010565           30 LNLPPSPPGLPIIGNLHQLG-SLPH-RSLKDLSSKY-GPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGD  106 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~~-~~~~-~~~~~~~~~y-G~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  106 (507)
                      .+.||||+++|++||++.+. +.+. .++.++.++| |+||++++|++++|+|+||+++++++.++...|..++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            34789999999999998873 2332 4566667766 7999999999999999999999999998877788877543333


Q ss_pred             ccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHH
Q 010565          107 VLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRS  186 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~  186 (507)
                      .+..++.++.+..+|+.|+++|+++++.+++......+.+...++++.+++.+.+....++++|+.+.+.++++|+++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            22222234566667999999999985444555555566667777889999999865444567999999999999999999


Q ss_pred             Hhcccccccccc----CcchhHHHHHHHHHHHHhc---CCccccccc-cccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 010565          187 VLGRRVEEESTA----GGKSNKFGELSKRLLIQLG---SISFRDLFP-SFGWLDVVTGHIGRLKATTREFDALFDQVIEE  258 (507)
Q Consensus       187 ~fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~  258 (507)
                      +||.++......    ......+............   .....+.+| ++.+.. +.+..++.....+.+.+++++++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence            999998542110    0011112212222222111   111122233 222110 1123344555666788888888888


Q ss_pred             HHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHH
Q 010565          259 HRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEE  338 (507)
Q Consensus       259 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  338 (507)
                      +++....  ........|+++.|++...+++ ...++++++..++.++++||+|||+++++|++++|+.||++|+++++|
T Consensus       278 ~~~~~~~--~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        278 RVELWRE--KGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHHHhhh--ccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            7653110  0011234689999997653321 114899999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCc
Q 010565          339 VRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEE  418 (507)
Q Consensus       339 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  418 (507)
                      |++++++++.++.+++.+||||+|||+||||+||+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       355 i~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~  434 (534)
T PLN03018        355 LDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLV  434 (534)
T ss_pred             HHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccc
Confidence            99999877788999999999999999999999999998767999999999999999999999999999999999999999


Q ss_pred             cCCcccCCCCCCC-----CCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCcccc
Q 010565          419 FLPERFINSTIDF-----NGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVT  493 (507)
Q Consensus       419 F~P~R~l~~~~~~-----~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (507)
                      |+||||++++...     ...+..|+|||+|+|.|+|++||.+|+++++|+||++|++++.++.  .+++.....+.+..
T Consensus       435 F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~  512 (534)
T PLN03018        435 YEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM  512 (534)
T ss_pred             cCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceec
Confidence            9999999754211     1245689999999999999999999999999999999999987653  13334333354444


Q ss_pred             ccCCeeEeeccCC
Q 010565          494 KKHPLILMPTLYS  506 (507)
Q Consensus       494 ~~~~~~v~~~~r~  506 (507)
                       +.++.|++++|.
T Consensus       513 -p~~~~v~~~~R~  524 (534)
T PLN03018        513 -AKPLLLSVEPRL  524 (534)
T ss_pred             -CCCeEEEEEecc
Confidence             459999999984


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=7.7e-75  Score=564.90  Aligned_cols=432  Identities=22%  Similarity=0.306  Sum_probs=341.6

Q ss_pred             CCCCCCCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCccc
Q 010565           27 KSKLNLPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGD  106 (507)
Q Consensus        27 ~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  106 (507)
                      ++..+.||||+++|++||++.+.+++..++.+++++||++|++++|++++++|+||+++++++.++...+..+.......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            33356789999999999998876677889999999999999999999999999999999999987665553332111111


Q ss_pred             ccccCCCceeecCCChhHHHHHHHhhhccCchHHHhh-hHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010565          107 VLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQS-LHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSR  185 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~-~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                        .++ .+.+++.+|+.|+++|+.+ .+.|++..++. +.+.+.+.+++++++|..    ++.+|+.+.+..+++++++.
T Consensus       107 --~lg-~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        107 --ILG-TCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             --HhC-ccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHHHH
Confidence              122 3344456799999999998 68899988876 788888888888877642    35699999999999999999


Q ss_pred             HHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010565          186 SVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMS  265 (507)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  265 (507)
                      ++||.+...      ...++.......   ....   ..+|.  ++.  ....++..++.+.+.+++++.++++++.   
T Consensus       179 ~~~g~~~~~------~~~~~~~~~~~~---~~~~---~~~~~--~lp--~~~~~~~~~~~~~~~~~~~~~i~~r~~~---  239 (463)
T PLN02774        179 QIAGTLSKP------ISEEFKTEFFKL---VLGT---LSLPI--DLP--GTNYRSGVQARKNIVRMLRQLIQERRAS---  239 (463)
T ss_pred             HHcCCCChH------HHHHHHHHHHHH---hccc---ccCCc--CCC--ChhhhHHHHHHHHHHHHHHHHHHHHHhc---
Confidence            999986442      112232222221   1110   01111  110  1124566677888899999999887643   


Q ss_pred             cCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhcc
Q 010565          266 HEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKN  345 (507)
Q Consensus       266 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  345 (507)
                           .....|+++.+++...++   ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.
T Consensus       240 -----~~~~~d~l~~ll~~~~~~---~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~  311 (463)
T PLN02774        240 -----GETHTDMLGYLMRKEGNR---YKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRER  311 (463)
T ss_pred             -----CCCcccHHHHHHhCccCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence                 233569999999743222   258999999999999999999999999999999999999999999999999864


Q ss_pred             ---CCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCc
Q 010565          346 ---KSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPE  422 (507)
Q Consensus       346 ---~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~  422 (507)
                         ++.++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~Pe  390 (463)
T PLN02774        312 KRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPW  390 (463)
T ss_pred             cCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCch
Confidence               34688999999999999999999999999875 69999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEee
Q 010565          423 RFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMP  502 (507)
Q Consensus       423 R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  502 (507)
                      ||++++..  . ...|+|||+|+|.|+|++||++|++++++.||++|+|++.++..  ...     ..+..|++++.|++
T Consensus       391 Rfl~~~~~--~-~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~--~~~-----~~~~~p~~g~~~~~  460 (463)
T PLN02774        391 RWLDKSLE--S-HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK--LMK-----FPRVEAPNGLHIRV  460 (463)
T ss_pred             hcCCCCcC--C-CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc--ccc-----CCCCCCCCCceEEe
Confidence            99975421  1 23699999999999999999999999999999999999976542  111     11344778898888


Q ss_pred             cc
Q 010565          503 TL  504 (507)
Q Consensus       503 ~~  504 (507)
                      ++
T Consensus       461 ~~  462 (463)
T PLN02774        461 SP  462 (463)
T ss_pred             ee
Confidence            75


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-74  Score=527.02  Aligned_cols=456  Identities=23%  Similarity=0.354  Sum_probs=381.1

Q ss_pred             CCCCCCCCCCCccccccCC----CCCCchhHHHHHhhcCCeEEEe-cCCcCeEEecCHHHHHHHHHHcCccccCCC-CCC
Q 010565           30 LNLPPSPPGLPIIGNLHQL----GSLPHRSLKDLSSKYGPLMFMH-LGHSPTLVVSSAEITRDIIKNHDIVFSNRP-KTT  103 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~----~~~~~~~~~~~~~~yG~i~~~~-~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~-~~~  103 (507)
                      ...+|||.++|++|.+..+    ..+.++.....+++|||||+.. +|+...|+|.+|++++.++++++ .++.|+ ...
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~  127 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIE  127 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccc
Confidence            4568999999999988733    4677888899999999999999 78899999999999999999765 345564 111


Q ss_pred             --cccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhcc---CCCceeHHHHHHHH
Q 010565          104 --AGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCL---SRGSVSLAEMLQTV  178 (507)
Q Consensus       104 --~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~---~~~~vd~~~~~~~~  178 (507)
                        ....-.+++...++..+|++|.+.|..+++..+.++.++.|.|.+++.+++++..++...+   ...+.|+.+.+.++
T Consensus       128 ~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  128 PWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence              1112234455667788899999999999888999999999999999999999999998865   23468999999999


Q ss_pred             HHHHHHHHHhccccccccc-cCcchhHHHHHHHHHHHHhcCCccccccc-cccccccccchHHHHHHHHHHHHHHHHHHH
Q 010565          179 TNNIVSRSVLGRRVEEEST-AGGKSNKFGELSKRLLIQLGSISFRDLFP-SFGWLDVVTGHIGRLKATTREFDALFDQVI  256 (507)
Q Consensus       179 ~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i  256 (507)
                      +++.+|.++||.++++... .+++.+.+.++++.++.....+   ...| +++++  .++.++++.++.+.+.+++...|
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~--~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYF--PTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhC--CChHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999754 3456678888888887665432   2223 33333  35789999999999999999988


Q ss_pred             HHHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHH
Q 010565          257 EEHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQ  336 (507)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  336 (507)
                      ++..+....+... ..+..+.+..++...       .++.+++..+++.+++||.|||++++.|+||.|++||++|++|+
T Consensus       283 d~~l~~l~~~~~~-~~~~~~~l~~~L~~~-------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  283 DNALEELEKQDSA-GSEYTGSLLELLLRK-------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHHhcccc-ccchhHHHHHHHHHc-------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            8887663221111 123334444444331       58899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcc-CCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCC
Q 010565          337 EEVRRVVKN-KSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDR  415 (507)
Q Consensus       337 ~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  415 (507)
                      +|+.++..+ +..++.+++.+||||.||||||+||||.+++.. |...+|.+++||.|||||.|.++++.+.+||++|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999987 578899999999999999999999999999975 999999999999999999999999999999999999


Q ss_pred             CCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCcccccc
Q 010565          416 AEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKK  495 (507)
Q Consensus       416 p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (507)
                      |++|+|||||+++. ...+++.++|||.|+|+|+|++||++||-++||+|+++|+++...+.     ++...+.+...|.
T Consensus       434 p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-----pv~~~~~~il~P~  507 (519)
T KOG0159|consen  434 PEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-----PVEYVYRFILVPN  507 (519)
T ss_pred             ccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-----CccceeEEEEcCC
Confidence            99999999999863 45688999999999999999999999999999999999999998753     2555667777888


Q ss_pred             CCeeEeeccCC
Q 010565          496 HPLILMPTLYS  506 (507)
Q Consensus       496 ~~~~v~~~~r~  506 (507)
                      .++.+.+++|+
T Consensus       508 ~~l~f~f~~r~  518 (519)
T KOG0159|consen  508 RPLRFKFRPRN  518 (519)
T ss_pred             CCcceeeeeCC
Confidence            89999999886


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.5e-73  Score=558.26  Aligned_cols=462  Identities=17%  Similarity=0.272  Sum_probs=345.8

Q ss_pred             HHHhhcCCCCCCCCCCCCCCccccccCCCCCCc---hhHHHHHhhcCCeEE---EecCCcCeEEecCHHHHHHHHHHcCc
Q 010565           21 LKLSRNKSKLNLPPSPPGLPIIGNLHQLGSLPH---RSLKDLSSKYGPLMF---MHLGHSPTLVVSSAEITRDIIKNHDI   94 (507)
Q Consensus        21 ~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~---~~~~~~~~~yG~i~~---~~~~~~~~vvv~dp~~i~~i~~~~~~   94 (507)
                      ++++..++   ..|||+++|++||+..+.++..   +.+.+..++||..++   .++|+.++++|+||+++++|+.++..
T Consensus        24 ~~~~~~~~---~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~  100 (500)
T PLN02169         24 FFIHKKPH---GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFG  100 (500)
T ss_pred             HHHHhccC---CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcc
Confidence            44444333   5789999999999977633333   333333344886665   67899999999999999999988665


Q ss_pred             cccCCCCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhh--hHHHHHHHHHHHHHHHHhhccCCCceeHH
Q 010565           95 VFSNRPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQS--LHYVKEEEVAIMINKIRSSCLSRGSVSLA  172 (507)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~--~~~~~~~~~~~li~~l~~~~~~~~~vd~~  172 (507)
                      .|.+++......  ...+.++ +..+|+.|+++|+++ .++|+...+..  +.+.+.+.++.+++.+.+...+++.+|+.
T Consensus       101 ~~~k~~~~~~~~--~~~g~gl-~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~  176 (500)
T PLN02169        101 NYPKGPEFKKIF--DVLGEGI-LTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQ  176 (500)
T ss_pred             cCCCcHHHHHHH--HhhcCcc-cccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHH
Confidence            555543221111  1124444 455699999999998 79999887764  34677788888988887654456789999


Q ss_pred             HHHHHHHHHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccc--cccc-cchHHHHHHHHHHHH
Q 010565          173 EMLQTVTNNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGW--LDVV-TGHIGRLKATTREFD  249 (507)
Q Consensus       173 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--l~~~-~~~~~~~~~~~~~l~  249 (507)
                      +.+.++++|++++++||.+.+.... .....++....+.......   ...+.|++.+  ..++ .+..++..++.+.+.
T Consensus       177 ~~~~~~t~dvi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (500)
T PLN02169        177 DVFMRFMFDTSSILMTGYDPMSLSI-EMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVN  252 (500)
T ss_pred             HHHHHHHHHHHHhheeCCCccccCC-CCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence            9999999999999999998765321 1112345444443322211   1112232111  0111 234577788899999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcC-CCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhC
Q 010565          250 ALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDG-KLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKN  328 (507)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  328 (507)
                      ++++++|++++++.... .+..+...|+++.+++...+. .....++++++.+++.++++||+|||+++++|++++|++|
T Consensus       253 ~~~~~~I~~r~~~~~~~-~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~  331 (500)
T PLN02169        253 RMFAKIISSRRKEEISR-AETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKH  331 (500)
T ss_pred             HHHHHHHHHHHHHhhcc-ccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCC
Confidence            99999998887541111 110122468999999764321 1112478999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCccccccccccccc-ccCeeeCCCCEEEEehhhcc
Q 010565          329 PKLLKKAQEEVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVN-LGGYDIPAKTIVYMNVWAIQ  407 (507)
Q Consensus       329 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~-~~g~~ip~g~~v~~~~~~~~  407 (507)
                      |++|+|+++||+++      ++++++.+||||+|||+||||+||++|... |.+.+|.+ ++||.|||||.|++++|++|
T Consensus       332 Pevq~kl~~Ei~~v------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ih  404 (500)
T PLN02169        332 PQVMAKIRHEINTK------FDNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALG  404 (500)
T ss_pred             HHHHHHHHHHHHhh------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhh
Confidence            99999999999987      367899999999999999999999999975 66666655 59999999999999999999


Q ss_pred             CCCCCC-CCCCccCCcccCCCCCCCC-CCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcc
Q 010565          408 RDPKVW-DRAEEFLPERFINSTIDFN-GQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMT  485 (507)
Q Consensus       408 ~d~~~~-~~p~~F~P~R~l~~~~~~~-~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~  485 (507)
                      |||++| +||++|+||||++++.... ..+..|+|||+|+|.|+|++||++|+++++|.||++|++++.++..     ..
T Consensus       405 rd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~-----~~  479 (500)
T PLN02169        405 RMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK-----IE  479 (500)
T ss_pred             CCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC-----cc
Confidence            999999 8999999999997643322 2367899999999999999999999999999999999999875431     22


Q ss_pred             cccCccccccCCeeEeeccCC
Q 010565          486 EEYGLAVTKKHPLILMPTLYS  506 (507)
Q Consensus       486 ~~~~~~~~~~~~~~v~~~~r~  506 (507)
                      ...++++++++++.|++++|.
T Consensus       480 ~~~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        480 AIPSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             cccceEEecCCCEEEEEEeCC
Confidence            344577889999999999985


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.3e-73  Score=564.55  Aligned_cols=459  Identities=20%  Similarity=0.293  Sum_probs=344.4

Q ss_pred             CCCCCCCCCccccccCCCCCCchhHHHHHhhc---CCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCccccc
Q 010565           32 LPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKY---GPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVL  108 (507)
Q Consensus        32 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~y---G~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~  108 (507)
                      .+|||+++|++||++.+..+ +..+.+|.++|   |++|++++|+.++++++||+++++|+.++...+...+.+..... 
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~-  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME-  108 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH-
Confidence            37999999999998765333 34566777777   89999999999999999999999999875444443322111100 


Q ss_pred             ccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHH-HHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHH
Q 010565          109 LYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVK-EEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSV  187 (507)
Q Consensus       109 ~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~-~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (507)
                      ...+.+ +++.+|+.|+++|+.+ .+.|+.++++.+.+.+ .+.++.+++.+.+...+++.+|+.++++.+++|+++.++
T Consensus       109 ~~~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        109 VLLGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             HHhcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            112334 4567799999999998 7889999999999875 666778888776543356679999999999999999999


Q ss_pred             hccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 010565          188 LGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVV-TGHIGRLKATTREFDALFDQVIEEHRISAMSH  266 (507)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  266 (507)
                      ||.+++..... .....+.+..+.......   .....|.+.....+ ....++..++.+.+.+++++.+++++++....
T Consensus       187 fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        187 FGVEIGTLSPS-LPENPFAQAFDTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             hCCCccccccC-CCccHHHHHHHHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99998764211 112245444443322110   00011211100000 12234455677788888988888876541110


Q ss_pred             CCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhcc-
Q 010565          267 EDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKN-  345 (507)
Q Consensus       267 ~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-  345 (507)
                      .........|+++.+++...++  +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++ 
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        263 RKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence            0011123568999999754332  2369999999999999999999999999999999999999999999999998743 


Q ss_pred             -------------------CCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccc-cCeeeCCCCEEEEehhh
Q 010565          346 -------------------KSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNL-GGYDIPAKTIVYMNVWA  405 (507)
Q Consensus       346 -------------------~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~  405 (507)
                                         ++.++++++++||||+|||+||||+||+++.. +|.+.+|.++ +||.|||||.|.+++++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               24578999999999999999999999999997 4767776655 99999999999999999


Q ss_pred             ccCCCCCC-CCCCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCc
Q 010565          406 IQRDPKVW-DRAEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDM  484 (507)
Q Consensus       406 ~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  484 (507)
                      +||||++| +||++|+||||++++......+..|+|||+|+|.|+|++||++|+++++|+|+++|++++.++.   +  .
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~  494 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---P--V  494 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---c--c
Confidence            99999999 9999999999996432122345689999999999999999999999999999999999987553   1  1


Q ss_pred             ccccCccccccCCeeEeeccCC
Q 010565          485 TEEYGLAVTKKHPLILMPTLYS  506 (507)
Q Consensus       485 ~~~~~~~~~~~~~~~v~~~~r~  506 (507)
                      ......+..++.+++|++++|+
T Consensus       495 ~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        495 KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeeeeEEecCCCEEEEEEeCC
Confidence            2223455678889999999985


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=5.5e-75  Score=573.57  Aligned_cols=455  Identities=32%  Similarity=0.567  Sum_probs=365.7

Q ss_pred             CCCCCCCCccccccCCC--CCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcccc--c
Q 010565           33 PPSPPGLPIIGNLHQLG--SLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDV--L  108 (507)
Q Consensus        33 ~Pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~--~  108 (507)
                      ||||+++|++||+.++.  +++++.+.+++++|||||+++++++++++|+||+++++|+.++...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  6788889999999999999999999999999999999999987655555432222221  1


Q ss_pred             ccCCCceeecCCChhHHHHHHHhhhccCchH-HHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHH
Q 010565          109 LYGSKDIGFSSYGEYWREARKTCVLGLLSNK-KVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSV  187 (507)
Q Consensus       109 ~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~-~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (507)
                      ...+.+ ++..+|+.|+++|+.+ .+.|+.. .+ .+.+.+.+.++.+++.+.+....++.+|+.++++.+++|+++.++
T Consensus        81 ~~~~~~-l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKG-LFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTS-STTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccccc-cccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            222344 4455589999999998 6777776 66 999999999999999999986655679999999999999999999


Q ss_pred             hccccccccccCcchhHHHHHHHHHHHHhcCC--ccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010565          188 LGRRVEEESTAGGKSNKFGELSKRLLIQLGSI--SFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMS  265 (507)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  265 (507)
                      ||.+++...  ++...++.+....+...+...  .....+|++.++.  ....++..++.+.+.+++++.+++++++.. 
T Consensus       158 fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  232 (463)
T PF00067_consen  158 FGKDFGSLD--DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELD-  232 (463)
T ss_dssp             HSSHHHGTT--HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHH-
T ss_pred             ccceeeecc--cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccc-
Confidence            999987431  112335556666555433221  2334455443331  245667777888999999999999887622 


Q ss_pred             cCCCCCCCcchHHHHHHhhh-hcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhc
Q 010565          266 HEDNDQSDKKDLVYALLKLQ-KDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVK  344 (507)
Q Consensus       266 ~~~~~~~~~~dll~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  344 (507)
                         .......|+++.++... ..++ +..++++++..++..+++||++||+.+++|++++|++||++|+++++|++++++
T Consensus       233 ---~~~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  308 (463)
T PF00067_consen  233 ---DGDESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG  308 (463)
T ss_dssp             ---SSSSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT
T ss_pred             ---cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               11246789999999886 2221 137999999999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCccc
Q 010565          345 NKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERF  424 (507)
Q Consensus       345 ~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~  424 (507)
                      +++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|+||
T Consensus       309 ~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~  388 (463)
T PF00067_consen  309 DGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERF  388 (463)
T ss_dssp             TSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77788999999999999999999999999996678999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEee
Q 010565          425 INSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMP  502 (507)
Q Consensus       425 l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  502 (507)
                      ++.+.........|+|||.|+|.|+|++||++|+++++|+||++||+++.++....  ......+++ .++.+++|.|
T Consensus       389 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~  463 (463)
T PF00067_consen  389 LDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPE--PQEQQNGFL-LPPKPLKVKF  463 (463)
T ss_dssp             BTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGG--EEECSCSSS-EEESSSEEEE
T ss_pred             cccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCC--CccccCceE-eeCCCcEEeC
Confidence            99865334567899999999999999999999999999999999999997764312  122222444 4445888765


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.7e-73  Score=549.92  Aligned_cols=428  Identities=22%  Similarity=0.355  Sum_probs=343.9

Q ss_pred             CCCCCCCCCCCCCCccccccCC-CCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcc
Q 010565           27 KSKLNLPPSPPGLPIIGNLHQL-GSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAG  105 (507)
Q Consensus        27 ~~~~~~~Pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  105 (507)
                      .+..+.||||+++|++||++.+ .++++.++.+++++||++|+++++++++|+++||+++++++.++...+.  +.....
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~  108 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPAS  108 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchH
Confidence            3446778999999999998775 6788999999999999999999999999999999999999987766553  222211


Q ss_pred             cccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010565          106 DVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSR  185 (507)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                      ..... +...++..+|+.|+++|+++ .+.|++++++.+.+.+.+.++.+++.|.     ++.+|+.++++.+++++++.
T Consensus       109 ~~~~~-g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~  181 (463)
T PLN02196        109 KERML-GKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALL  181 (463)
T ss_pred             HHHHc-CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHH
Confidence            11122 33345566799999999998 6889999999999999999999988763     35799999999999999999


Q ss_pred             HHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010565          186 SVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMS  265 (507)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  265 (507)
                      ++||.+...      ....+.+.....    ..  ....+|+.  +.  ....++..++.+.+.+++.+.+++++++   
T Consensus       182 ~~fG~~~~~------~~~~~~~~~~~~----~~--~~~~~~~~--~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~---  242 (463)
T PLN02196        182 SIFGKDEVL------YREDLKRCYYIL----EK--GYNSMPIN--LP--GTLFHKSMKARKELAQILAKILSKRRQN---  242 (463)
T ss_pred             HHcCCCCch------HHHHHHHHHHHH----hc--chhccccc--CC--CccchHHHHHHHHHHHHHHHHHHHHhhc---
Confidence            999987532      111222221111    11  01112221  10  1123556677888889999888877643   


Q ss_pred             cCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhcc
Q 010565          266 HEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKN  345 (507)
Q Consensus       266 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  345 (507)
                           ..+..|+++.+++.   +   ..++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+.
T Consensus       243 -----~~~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~  311 (463)
T PLN02196        243 -----GSSHNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKD  311 (463)
T ss_pred             -----CCCcccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence                 23456899998853   1   268999999999999999999999999999999999999999999999998864


Q ss_pred             ---CCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCc
Q 010565          346 ---KSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPE  422 (507)
Q Consensus       346 ---~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~  422 (507)
                         ++.++++++++||||+|||+||||++|+++... |.+.+|++++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~Pe  390 (463)
T PLN02196        312 KEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPS  390 (463)
T ss_pred             cccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChh
Confidence               356889999999999999999999999999965 9999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEee
Q 010565          423 RFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMP  502 (507)
Q Consensus       423 R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  502 (507)
                      ||+++.     .+..++|||+|+|.|+|+++|++|+++++|.|+++|+|++.++..  .  .  .+..+..|++++.|++
T Consensus       391 Rfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~--~--~~~~~~~p~~~~~~~~  459 (463)
T PLN02196        391 RFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--G--I--QYGPFALPQNGLPIAL  459 (463)
T ss_pred             hhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--c--e--EEcccccCCCCceEEE
Confidence            999642     346899999999999999999999999999999999999876531  1  2  2343456888888887


Q ss_pred             ccC
Q 010565          503 TLY  505 (507)
Q Consensus       503 ~~r  505 (507)
                      ++.
T Consensus       460 ~~~  462 (463)
T PLN02196        460 SRK  462 (463)
T ss_pred             ecC
Confidence            653


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8.6e-72  Score=552.99  Aligned_cols=446  Identities=23%  Similarity=0.364  Sum_probs=340.5

Q ss_pred             cccccCC-CCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcccccccCCCceeecCC
Q 010565           42 IGNLHQL-GSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVLLYGSKDIGFSSY  120 (507)
Q Consensus        42 ~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (507)
                      +||+..+ .+.++..+.+|+++|||||++++|++++++|+||+.+++|+.++...+.+++....... . .+.+ ++..+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~-~-~g~~-l~~~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEF-V-MGKG-LIPAD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhh-c-cCCc-eecCC
Confidence            3444444 46677889999999999999999999999999999999999976655655432111111 1 2334 44567


Q ss_pred             ChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhccccccccccCc
Q 010565          121 GEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSVLGRRVEEESTAGG  200 (507)
Q Consensus       121 g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~  200 (507)
                      |+.|+++|+.+ .++|+...+..+++.+.+.++.+++++.+...+++.+|+...+..+++|+++.++||.+++...    
T Consensus       219 ge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~----  293 (633)
T PLN02738        219 GEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLS----  293 (633)
T ss_pred             cHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccc----
Confidence            99999999998 7999999999999999999999999998765567789999999999999999999999987532    


Q ss_pred             chhHHHHHHHHHHHHhcCCcccccccccccc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CCCCCCCc
Q 010565          201 KSNKFGELSKRLLIQLGSISFRDLFPSFGWL-DVVTGHIGRLKATTREFDALFDQVIEEHRISAMSH-----EDNDQSDK  274 (507)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l-~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-----~~~~~~~~  274 (507)
                      +.+.+...+..............+.++...+ ..++...++..++.+.+.++.+++++.+++.....     ........
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~  373 (633)
T PLN02738        294 NDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERD  373 (633)
T ss_pred             cchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccccc
Confidence            1123333333332221110011111111110 01112234455555666666666665433210000     00001234


Q ss_pred             chHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccCCCCCcccC
Q 010565          275 KDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNKSSINMDDV  354 (507)
Q Consensus       275 ~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  354 (507)
                      .|+++.|++..      ..++++++.++++.+++||+|||+++++|++++|++||++|+|+|+|+++++++ +.++++++
T Consensus       374 ~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL  446 (633)
T PLN02738        374 PSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDM  446 (633)
T ss_pred             chHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHH
Confidence            58999998652      258999999999999999999999999999999999999999999999999874 66899999


Q ss_pred             CCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCcccCCCCC--CCC
Q 010565          355 DQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFINSTI--DFN  432 (507)
Q Consensus       355 ~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~--~~~  432 (507)
                      ++||||+|||+|+|||||+++.. +|.+.+|.+++||.|||||.|.++.+.+||||++||||++|+||||+.++.  +..
T Consensus       447 ~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~  525 (633)
T PLN02738        447 KKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNET  525 (633)
T ss_pred             ccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCcccc
Confidence            99999999999999999999995 599999999999999999999999999999999999999999999985321  112


Q ss_pred             CCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEeeccCCC
Q 010565          433 GQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMPTLYSP  507 (507)
Q Consensus       433 ~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  507 (507)
                      .....|+|||.|+|.|+|++||++|+++++|+|+++|+|++.++..  +  .....+++..++++++|++++|+.
T Consensus       526 ~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        526 NQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEEEEECCC
Confidence            3456899999999999999999999999999999999999987642  2  222235667888899999999863


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.3e-71  Score=541.04  Aligned_cols=438  Identities=22%  Similarity=0.316  Sum_probs=341.8

Q ss_pred             CCCCCCCCCCCCCCccccccCC-----CCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCC
Q 010565           27 KSKLNLPPSPPGLPIIGNLHQL-----GSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPK  101 (507)
Q Consensus        27 ~~~~~~~Pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~  101 (507)
                      +++.+.||||.++|++||++.+     ..+++.++.+|+++||+||++++|++++||++||+++++++.++...+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            3456688999999999999876     24678899999999999999999999999999999999999987766654432


Q ss_pred             CCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhh-hHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHH
Q 010565          102 TTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQS-LHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTN  180 (507)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~-~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~  180 (507)
                      . .... .+ |.+.++..+|+.|+++|+++ .+.|+...+.. ..+.+.+.+..+++.+.    .++.+|+.+.+..+++
T Consensus        83 ~-~~~~-l~-g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTE-LM-GKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHH-Hh-CcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence            1 1111 12 23345566799999999998 67787766665 35566566655555542    3567999999999999


Q ss_pred             HHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010565          181 NIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHR  260 (507)
Q Consensus       181 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  260 (507)
                      +++++++||.+...      ...++......+......  .+.++|.        ...++..++.+.+.+++.+++++++
T Consensus       155 ~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~--------~~~~~~~~~~~~l~~~~~~~i~~~~  218 (452)
T PLN03141        155 EVLVKALISLEPGE------EMEFLKKEFQEFIKGLMS--LPIKLPG--------TRLYRSLQAKKRMVKLVKKIIEEKR  218 (452)
T ss_pred             HHHHHHHcCCCchH------HHHHHHHHHHHHhhhHHh--CccCCCc--------hHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999986543      222333333332222111  1111111        1224455678889999999998887


Q ss_pred             HhhcccCCCC-CCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHH
Q 010565          261 ISAMSHEDND-QSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEV  339 (507)
Q Consensus       261 ~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (507)
                      +. .....+. .....|+++.+++..  +   ..++++++..+++.+++||+|||+.+++|++++|++||++|+++++|+
T Consensus       219 ~~-~~~~~~~~~~~~~d~l~~ll~~~--~---~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei  292 (452)
T PLN03141        219 RA-MKNKEEDETGIPKDVVDVLLRDG--S---DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEEN  292 (452)
T ss_pred             HH-HhccCccccCChhhHHHHHHhcC--C---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            54 2111000 012468999998753  1   268999999999999999999999999999999999999999999999


Q ss_pred             HHHhc----cCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCC
Q 010565          340 RRVVK----NKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDR  415 (507)
Q Consensus       340 ~~~~~----~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  415 (507)
                      +++++    .+..++.+++.+||||+|||+|++|+||+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~d  371 (452)
T PLN03141        293 MKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDN  371 (452)
T ss_pred             HHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCC
Confidence            98864    23457889999999999999999999999986 57999999999999999999999999999999999999


Q ss_pred             CCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCcccccc
Q 010565          416 AEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKK  495 (507)
Q Consensus       416 p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (507)
                      |++|+||||++++    ..+..|+|||+|+|.|+|++||.+|+++++|.|+++|+|++.++..     .   ...++.++
T Consensus       372 P~~F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~-----~---~~~~~~~~  439 (452)
T PLN03141        372 PYQFNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI-----V---NFPTVRMK  439 (452)
T ss_pred             ccccCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe-----e---ecccccCC
Confidence            9999999999753    2356899999999999999999999999999999999999876531     1   12467888


Q ss_pred             CCeeEeeccCCC
Q 010565          496 HPLILMPTLYSP  507 (507)
Q Consensus       496 ~~~~v~~~~r~~  507 (507)
                      .++.|.+++|.+
T Consensus       440 ~~~~~~~~~~~~  451 (452)
T PLN03141        440 RKLPIWVTRIDD  451 (452)
T ss_pred             CCceEEEEeCCC
Confidence            999999999964


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=9.4e-71  Score=533.32  Aligned_cols=462  Identities=22%  Similarity=0.328  Sum_probs=351.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCC-----CCCchhHHHHHhhcCCeEEEecCCcC
Q 010565            1 MLVSLLLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPGLPIIGNLHQLG-----SLPHRSLKDLSSKYGPLMFMHLGHSP   75 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~~~~~   75 (507)
                      |++++.+++++.++++..+++.. ....+.++||||.++|++||++.+.     .++..++.+++++||++|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~   79 (472)
T PLN02987          1 MAFSAFLLLLSSLAAIFFLLLRR-TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEP   79 (472)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCC
Confidence            66777777777666655544433 3334456789999999999998762     45788899999999999999999999


Q ss_pred             eEEecCHHHHHHHHHHcCccccCCCCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHH
Q 010565           76 TLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIM  155 (507)
Q Consensus        76 ~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l  155 (507)
                      +++|+||+++++++.++...|..+......  ..+|+.++ +..+|+.|+++|+++ .++++...++.+.   .+++.++
T Consensus        80 ~vvv~~pe~~~~il~~~~~~f~~~~~~~~~--~~lg~~~l-~~~~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~  152 (472)
T PLN02987         80 TVFSADPETNRFILQNEGKLFECSYPGSIS--NLLGKHSL-LLMKGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRL  152 (472)
T ss_pred             eEEEeCHHHHHHHHhCCCceEEecCcHHHH--HHhCcccc-cccCcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHH
Confidence            999999999999999877666544321111  12233334 445799999999997 4554544554433   1223333


Q ss_pred             HHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCcccccccccccccccc
Q 010565          156 INKIRSSCLSRGSVSLAEMLQTVTNNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVT  235 (507)
Q Consensus       156 i~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~  235 (507)
                      ++...+..  .+.+++.+.+++++++++++++||.+.+..      .+.+.+.+.......    ....+|++      .
T Consensus       153 ~~~~~~~~--~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~------~~~~~~~~~~~~~~~----~~~~~p~l------~  214 (472)
T PLN02987        153 IRFNLDSW--SSRVLLMEEAKKITFELTVKQLMSFDPGEW------TESLRKEYVLVIEGF----FSVPLPLF------S  214 (472)
T ss_pred             HHHHHHhh--ccceehHHHHHHHHHHHHHHHHcCCCChHH------HHHHHHHHHHHHhhh----hcCCCcCC------C
Confidence            33222211  146999999999999999999999876431      122222222221111    11123332      1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHH
Q 010565          236 GHIGRLKATTREFDALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTA  315 (507)
Q Consensus       236 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~  315 (507)
                      ...++..++++++.+++.+.++++++. ..   .......|+++.|++..      ..++++++.+++.++++||+|||+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~i~~r~~~-~~---~~~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta  284 (472)
T PLN02987        215 TTYRRAIQARTKVAEALTLVVMKRRKE-EE---EGAEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTS  284 (472)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhh-hh---ccCcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHH
Confidence            346777888999999999999988754 11   11123569999999753      158999999999999999999999


Q ss_pred             HHHHHHHHHHHhChHHHHHHHHHHHHHhc---cCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCee
Q 010565          316 TTVEWAMAELAKNPKLLKKAQEEVRRVVK---NKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYD  392 (507)
Q Consensus       316 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~  392 (507)
                      ++++|++++|++||++|+++++|++++.+   +++.++++++.+|||++||++|+||+||+++.. +|.+.+|++++||.
T Consensus       285 ~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~  363 (472)
T PLN02987        285 TIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYT  363 (472)
T ss_pred             HHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEE
Confidence            99999999999999999999999999875   234578899999999999999999999999864 69999999999999


Q ss_pred             eCCCCEEEEehhhccCCCCCCCCCCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceee
Q 010565          393 IPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWK  472 (507)
Q Consensus       393 ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~  472 (507)
                      |||||.|+++.+++||||++|+||++|+||||++++.. ......++|||+|+|.|+|++||.+|++++++.||++|+|+
T Consensus       364 ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~  442 (472)
T PLN02987        364 IPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWV  442 (472)
T ss_pred             ECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEE
Confidence            99999999999999999999999999999999975422 12345799999999999999999999999999999999999


Q ss_pred             cCCCCcCCCCCcccccCccccccCCeeEeeccCCC
Q 010565          473 LPGGAVDANLDMTEEYGLAVTKKHPLILMPTLYSP  507 (507)
Q Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  507 (507)
                      +.++..     ...  ..+..|.+++.+++++|.+
T Consensus       443 ~~~~~~-----~~~--~~~~~p~~~~~~~~~~r~~  470 (472)
T PLN02987        443 PAEQDK-----LVF--FPTTRTQKRYPINVKRRDV  470 (472)
T ss_pred             ECCCCc-----eee--cccccCCCCceEEEEeccc
Confidence            876532     111  3377888899999999853


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.1e-70  Score=540.92  Aligned_cols=440  Identities=24%  Similarity=0.365  Sum_probs=345.2

Q ss_pred             cCCCCCCCCCCCCCCccccccCC-----CCCCchhHHHHHhhcCC--eEEEecCCcCeEEecCHHHHHHHHHHcCccccC
Q 010565           26 NKSKLNLPPSPPGLPIIGNLHQL-----GSLPHRSLKDLSSKYGP--LMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSN   98 (507)
Q Consensus        26 ~~~~~~~~Pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~--i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~   98 (507)
                      ..+..+.||||+++|++|+++.+     .++++.++.+++++||+  +|+++++++++++++||+++++|+.+++ .|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            44446789999999999998776     34788899999999997  7999999999999999999999998654 3433


Q ss_pred             CCCCCcccccccCCCceeecCCChhHHHHHHHhhhccC-chHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHH
Q 010565           99 RPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLL-SNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQT  177 (507)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~-~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~  177 (507)
                      +.......  .+ +.+.+...+|+.|+++|+.+ .+.| +.++++.+.+.+.+.+..+++.+.+    ++.+|+.++++.
T Consensus       116 ~~~~~~~~--~~-g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVE--LI-GRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHH--Hh-ccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            32111111  12 23344456799999999998 5666 5778999999999999999998853    246999999999


Q ss_pred             HHHHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 010565          178 VTNNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIE  257 (507)
Q Consensus       178 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~  257 (507)
                      ++++++++++||.++...      ..++..........+..+  ...+|.        ...++..++.+.+.+++.+.++
T Consensus       188 ~~~~vi~~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~p~--------~~~~~~~~~~~~l~~~~~~~i~  251 (490)
T PLN02302        188 LTFKIIMYIFLSSESELV------MEALEREYTTLNYGVRAM--AINLPG--------FAYHRALKARKKLVALFQSIVD  251 (490)
T ss_pred             HHHHHHHHHHcCCCChHH------HHHHHHHHHHHHHHhhhC--CcCCCc--------hhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876531      222322222221111111  111121        1233445567788888888888


Q ss_pred             HHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHH
Q 010565          258 EHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQE  337 (507)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  337 (507)
                      ++++. .....  ..+..|+++.+++...+++  ..++++++.+++..+++||+|||+++++|++++|++||++|+++++
T Consensus       252 ~~~~~-~~~~~--~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~  326 (490)
T PLN02302        252 ERRNS-RKQNI--SPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKA  326 (490)
T ss_pred             HHHHh-hhccC--CCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            87654 21111  1345799999998654322  3589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccC----CCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCC
Q 010565          338 EVRRVVKNK----SSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVW  413 (507)
Q Consensus       338 Ei~~~~~~~----~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~  413 (507)
                      |+++++++.    ..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|
T Consensus       327 E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~  405 (490)
T PLN02302        327 EQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVY  405 (490)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccC
Confidence            999998642    1378899999999999999999999999985 69999999999999999999999999999999999


Q ss_pred             CCCCccCCcccCCCCCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCcccc
Q 010565          414 DRAEEFLPERFINSTIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVT  493 (507)
Q Consensus       414 ~~p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (507)
                      +||++|+||||++.+    ..+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..  +  ..  ......
T Consensus       406 ~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~--~~--~~~~~~  475 (490)
T PLN02302        406 PNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC--K--VM--YLPHPR  475 (490)
T ss_pred             CCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC--c--ce--eCCCCC
Confidence            999999999999753    2456899999999999999999999999999999999999875431  1  22  222367


Q ss_pred             ccCCeeEeeccCC
Q 010565          494 KKHPLILMPTLYS  506 (507)
Q Consensus       494 ~~~~~~v~~~~r~  506 (507)
                      |+.++.+++++|+
T Consensus       476 p~~~~~~~~~~~~  488 (490)
T PLN02302        476 PKDNCLARITKVA  488 (490)
T ss_pred             CCCCceEEEEecc
Confidence            8889999998875


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=8.6e-71  Score=539.12  Aligned_cols=453  Identities=23%  Similarity=0.362  Sum_probs=355.1

Q ss_pred             CCCCCCCCCccccccCC-----CCCCchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCccc
Q 010565           32 LPPSPPGLPIIGNLHQL-----GSLPHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGD  106 (507)
Q Consensus        32 ~~Pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  106 (507)
                      +-.|-.|||.+|+.+++     .+.++..+.+|+++|||+|++++|++++++++||+++++|+.+....|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34688899999998876     4678899999999999999999999999999999999999987666666553221111


Q ss_pred             ccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHH-HHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010565          107 VLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHY-VKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSR  185 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~-~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                       .. .+.+ ++..+|+.|+++|+.+ .+.|+..+++.+.+ .+.++++.+++.+.+...+++++|+.++++.+++++++.
T Consensus        93 -~~-~~~~-i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 -FL-FGSG-FAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             -HH-hcCc-cccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence             11 2333 4456799999999998 78899888888754 788999999999987755667899999999999999999


Q ss_pred             HHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccc--cccccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010565          186 SVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGW--LDVVTGHIGRLKATTREFDALFDQVIEEHRISA  263 (507)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  263 (507)
                      ++||.+++....    ..++.+.+...+..... .....+|++.+  +..+.+..++..++.+.+.+++.+.++++++. 
T Consensus       169 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~-  242 (489)
T PLN02936        169 SVFNYNFDSLTT----DSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEI-  242 (489)
T ss_pred             HHcCCCcccccc----CcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            999999886421    12344444443322211 11123333211  11111234566777888888888888776643 


Q ss_pred             cccCCC-------CCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHH
Q 010565          264 MSHEDN-------DQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQ  336 (507)
Q Consensus       264 ~~~~~~-------~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  336 (507)
                      .....+       ......|+++.|++..      +.++++++.++++.+++||+|||+++++|++++|++||++|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~  316 (489)
T PLN02936        243 VEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQ  316 (489)
T ss_pred             HhhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            111010       0123468999998643      258899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCC
Q 010565          337 EEVRRVVKNKSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRA  416 (507)
Q Consensus       337 ~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  416 (507)
                      +|+++++++ ..++++++++||||+|||+||||++|+++...+|.+..|+.++||.||+||.|+++.+++||||++|+||
T Consensus       317 ~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP  395 (489)
T PLN02936        317 EELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERA  395 (489)
T ss_pred             HHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCc
Confidence            999999875 4578999999999999999999999999998877777888889999999999999999999999999999


Q ss_pred             CccCCcccCCCCCC--CCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccc
Q 010565          417 EEFLPERFINSTID--FNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTK  494 (507)
Q Consensus       417 ~~F~P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (507)
                      ++|+||||++++..  ....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..   +.  ...+++..+
T Consensus       396 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~---~~--~~~~~~~~~  470 (489)
T PLN02936        396 EEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD---IV--MTTGATIHT  470 (489)
T ss_pred             cccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc---cc--eecceEEee
Confidence            99999999965321  122345899999999999999999999999999999999999876532   21  223566678


Q ss_pred             cCCeeEeeccCC
Q 010565          495 KHPLILMPTLYS  506 (507)
Q Consensus       495 ~~~~~v~~~~r~  506 (507)
                      +.+++|++++|.
T Consensus       471 ~~~~~v~~~~R~  482 (489)
T PLN02936        471 TNGLYMTVSRRR  482 (489)
T ss_pred             CCCeEEEEEeee
Confidence            889999999885


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.7e-70  Score=482.57  Aligned_cols=474  Identities=23%  Similarity=0.377  Sum_probs=372.0

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC-CCccccccCCCCCCchhHHHHHhhcCCeEEEecCCcCeEEe
Q 010565            1 MLVSLLLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPG-LPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLGHSPTLVV   79 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv   79 (507)
                      |+++++..+++++++++++.+.+++.+. .+.||.-.+ +|++|+...|++++..++.++++|||+||++.++|+.+.++
T Consensus         2 l~~~L~~~i~lvi~~~l~~~~~~~~r~~-~~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfl   80 (486)
T KOG0684|consen    2 LATSLAGPILLVIALLLLLFLLLQRRTS-RKEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFL   80 (486)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHhcccC-CCCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEE
Confidence            3455555455555555554444444333 357887664 79999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHHcCccccCCCCCCcccccccCCCceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHH-
Q 010565           80 SSAEITRDIIKNHDIVFSNRPKTTAGDVLLYGSKDIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINK-  158 (507)
Q Consensus        80 ~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~-  158 (507)
                      .+|+....++..+...++....+.......| |++......+....++.+.+ ...+...+++++.+.|.+++...+.. 
T Consensus        81 l~p~~~~~v~~~~~~~ld~~~~~~~l~~~vF-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~  158 (486)
T KOG0684|consen   81 LGPEGYDFVFKAKLADLDFEEAYSKLTTPVF-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETS  158 (486)
T ss_pred             eCchhhHHHHcCcccccCHHHHHHHhhhhhc-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhcc
Confidence            9999999999876333332222211111122 35566556677777777776 77888899999999999999998887 


Q ss_pred             HHhhccCCCceeHHHHHHHHHHHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCccccccccccccccccchH
Q 010565          159 IRSSCLSRGSVSLAEMLQTVTNNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWLDVVTGHI  238 (507)
Q Consensus       159 l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~  238 (507)
                      +.+   +|....+..+...+++.+.-.++||+.....      .++......++...+..  +...||.  +++.  ...
T Consensus       159 ~~~---s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~------d~~~a~l~~dLd~~F~~--~d~~FP~--~LP~--~~~  223 (486)
T KOG0684|consen  159 LGE---SGETDGLYTFCRLIIFTASRLLLGGEVRDQL------DADVAKLYHDLDQGFQP--FDFLFPY--NLPI--PLL  223 (486)
T ss_pred             ccc---ccchhHhhhhhHHHhhhhHHHhhhhhhhhhh------cchHHHHHHHHhccccc--hHhhccc--CCCc--chh
Confidence            332   5666778888888888888888888876653      12233333333332222  3344553  2211  345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHH
Q 010565          239 GRLKATTREFDALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTV  318 (507)
Q Consensus       239 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l  318 (507)
                      ++..++++.+.+++...+.+|++. .      .....|+++.+++...++.   ..+++++...++.++|||+.||+.|.
T Consensus       224 r~~~ra~~~i~k~f~~~i~~rr~s-~------s~~~~dmlq~l~~~y~dg~---~~te~e~a~~li~~LwA~Q~ns~pts  293 (486)
T KOG0684|consen  224 RRRDRARKKISKIFSKIILDRRAS-I------SKWDNDMLQSLMEKYKDGR---PTTEEEIAGLLIGLLWAGQHNSSPTS  293 (486)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc-c------ccccHHHHHHHHHHhhcCC---cCcHHHHHHHHHHHHHhccccccHHH
Confidence            666689999999999999988865 1      3355689999988545554   79999999999999999999999999


Q ss_pred             HHHHHHHHhChHHHHHHHHHHHHHhccCCC-CCcccCCCcccHHHHHHhhcCCCCCCcccccccccccccccC----eee
Q 010565          319 EWAMAELAKNPKLLKKAQEEVRRVVKNKSS-INMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGG----YDI  393 (507)
Q Consensus       319 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g----~~i  393 (507)
                      +|++++|++|||+++.+++|++.+++.+.. ++++.+++||.|++||+|||||+||.+..+ |.+.+|.++.+    |.|
T Consensus       294 fW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~I  372 (486)
T KOG0684|consen  294 FWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVI  372 (486)
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceec
Confidence            999999999999999999999999987654 999999999999999999999999988865 99999999865    999


Q ss_pred             CCCCEEEEehhhccCCCCCCCCCCccCCcccCCCCCCC--CCC--CccccccCCCCCCCCChhHHHHHHHHHHHHHHhhc
Q 010565          394 PAKTIVYMNVWAIQRDPKVWDRAEEFLPERFINSTIDF--NGQ--HFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWF  469 (507)
Q Consensus       394 p~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~--~~~--~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~  469 (507)
                      |+|..|.++++.+|+||++|+||+.|+|+||++++.+.  .+.  .+.|||||+|.|.|||++||.+|+|.++..+|+.|
T Consensus       373 p~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~f  452 (486)
T KOG0684|consen  373 PKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHF  452 (486)
T ss_pred             CCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999765432  222  34569999999999999999999999999999999


Q ss_pred             eeecCCCCcCCCCCcccccCccccccCCeeEeeccCCC
Q 010565          470 DWKLPGGAVDANLDMTEEYGLAVTKKHPLILMPTLYSP  507 (507)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  507 (507)
                      |+++.++. ..++|+.+.   ++.|..+++|+.|+|+.
T Consensus       453 dleLid~~-~P~~d~s~~---v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  453 DLELIDGP-FPEVDYSRM---VMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             ceeecCCC-CCCCCHHHh---hcCCCCCceEEEeecCC
Confidence            99999973 244455444   77899999999999974


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.5e-67  Score=514.89  Aligned_cols=443  Identities=17%  Similarity=0.202  Sum_probs=339.6

Q ss_pred             CCCccccccCCCCCCchhHHHHHhhcC-CeEEEecCCcCeEEecCHHHHHHHHHHcCccccCCCCCCcccccccCCCcee
Q 010565           38 GLPIIGNLHQLGSLPHRSLKDLSSKYG-PLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFSNRPKTTAGDVLLYGSKDIG  116 (507)
Q Consensus        38 ~~p~~G~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (507)
                      ..++.|++.....+..+++..+.++++ .+++++.++.  ++++||+.+++|+..+...|.+...+..... ...+.+ +
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~-~~~g~g-i  123 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG-DLLGRG-I  123 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH-HhcCCc-e
Confidence            356888877755566777777888887 5788776554  8999999999999876555554432211100 112344 4


Q ss_pred             ecCCChhHHHHHHHhhhccCchHHHhhhH--HHHHHHHHHHHHHHHhhcc--CCCceeHHHHHHHHHHHHHHHHHhcccc
Q 010565          117 FSSYGEYWREARKTCVLGLLSNKKVQSLH--YVKEEEVAIMINKIRSSCL--SRGSVSLAEMLQTVTNNIVSRSVLGRRV  192 (507)
Q Consensus       117 ~~~~g~~w~~~R~~l~~~~~~~~~l~~~~--~~~~~~~~~li~~l~~~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~~  192 (507)
                      ++.+|+.|+++||.+ .+.|+..+++.+.  +.+.+.++.+++.+.+..+  +++++|+.++++++++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            567799999999998 7899998888764  6777888888888876532  2357999999999999999999999998


Q ss_pred             ccccccCcchhHHHHHHHHHHHHhcCCcccccccccccc-ccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 010565          193 EEESTAGGKSNKFGELSKRLLIQLGSISFRDLFPSFGWL-DVV-TGHIGRLKATTREFDALFDQVIEEHRISAMSHEDND  270 (507)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l-~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  270 (507)
                      +.... +....++.+.++.+...... .....+|++..+ ..+ .+..+++.++.+.+.+++.++|+++++.     .  
T Consensus       203 ~~l~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~-----~--  273 (502)
T PLN02426        203 GCLEL-SLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKL-----G--  273 (502)
T ss_pred             cccCC-CCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhc-----c--
Confidence            76421 11223455555443321110 001111221111 011 1335677788889999999999988754     1  


Q ss_pred             CCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccC-CCC
Q 010565          271 QSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNK-SSI  349 (507)
Q Consensus       271 ~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~  349 (507)
                      .....|+++.+++..        .+++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++++ +.+
T Consensus       274 ~~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~  345 (502)
T PLN02426        274 FSASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAA  345 (502)
T ss_pred             cCCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCC
Confidence            223569999999753        35789999999999999999999999999999999999999999999988753 368


Q ss_pred             CcccCCCcccHHHHHHhhcCCCCCCcccccccccccccc-cCeeeCCCCEEEEehhhccCCCCCC-CCCCccCCcccCCC
Q 010565          350 NMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNL-GGYDIPAKTIVYMNVWAIQRDPKVW-DRAEEFLPERFINS  427 (507)
Q Consensus       350 ~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~  427 (507)
                      +++++++||||+|||+|+||+||+++... |.+.+|.++ +||.||+||.|.++++++||||++| |||++|+||||+++
T Consensus       346 t~~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~  424 (502)
T PLN02426        346 SFEEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKN  424 (502)
T ss_pred             CHHHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCC
Confidence            99999999999999999999999999864 999998887 9999999999999999999999999 99999999999974


Q ss_pred             CCCCCCCCccccccCCCCCCCCChhHHHHHHHHHHHHHHhhceeecCCCCcCCCCCcccccCccccccCCeeEeeccCC
Q 010565          428 TIDFNGQHFDFIPFGTGRRFCPGMLFGKVAAEYLLANLLYWFDWKLPGGAVDANLDMTEEYGLAVTKKHPLILMPTLYS  506 (507)
Q Consensus       428 ~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  506 (507)
                      +......+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. ..  .....+++..++++++|++++|.
T Consensus       425 ~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~--~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        425 GVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-RA--PRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-CC--CcccceeEEecCCCEEEEEEEcc
Confidence            321123456899999999999999999999999999999999999865421 11  22234677889999999999885


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=5.5e-61  Score=461.09  Aligned_cols=408  Identities=16%  Similarity=0.250  Sum_probs=295.4

Q ss_pred             CCCCCCCCCCCccccccCC-----CCCCchhHHHHHhhcCC-eEEEecCCcCe-------EEecCHHHHHHHHHH----c
Q 010565           30 LNLPPSPPGLPIIGNLHQL-----GSLPHRSLKDLSSKYGP-LMFMHLGHSPT-------LVVSSAEITRDIIKN----H   92 (507)
Q Consensus        30 ~~~~Pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------vvv~dp~~i~~i~~~----~   92 (507)
                      .+.|||+.|+|++|++.++     ..++..++.+.++|||+ ||+++++|.|+       |+++||++++.+|.+    +
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~   95 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK   95 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence            4568999999999999864     45568999999999999 99999999766       999999999999974    3


Q ss_pred             CccccCCCCCCcccccccCCC--ceeecCCChhHHHHHHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCcee
Q 010565           93 DIVFSNRPKTTAGDVLLYGSK--DIGFSSYGEYWREARKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVS  170 (507)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd  170 (507)
                      ...+..... ....  .+|+.  ..++..+|+.|+++|+++ .+.|+ ..++.+.+.+.+.++.++++|.+....++++|
T Consensus        96 ~~~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vd  170 (480)
T PLN02648         96 RDVFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAE  170 (480)
T ss_pred             cccceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcc
Confidence            333332221 1222  23333  155667799999999998 68888 47789999999999999999965433455799


Q ss_pred             HHHHHHHHHHHHHHHHHhccccccccccCcchhHHHHHHHHHHHHhcCCcc-cccccc-cccc--ccccchHHHHHHHHH
Q 010565          171 LAEMLQTVTNNIVSRSVLGRRVEEESTAGGKSNKFGELSKRLLIQLGSISF-RDLFPS-FGWL--DVVTGHIGRLKATTR  246 (507)
Q Consensus       171 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~-l~~l--~~~~~~~~~~~~~~~  246 (507)
                      +.+.++.+++|++++++||.+.+..    .-.+.+........... .+.. ...++. +...  ...+..........+
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~~----~l~~~~~~~~~~~~~~~-~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  245 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSET----ALGSDGPALIQKWLALQ-LAPLASTGLPHVLEELLLHTFPLPFFLVKSDYD  245 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcchh----hhccchhHHHHHHHHHH-hhHHHHcCchHHHHHHhhcccCCchhhhhccHH
Confidence            9999999999999999999966531    01111212222111100 0000 000000 0000  000000000001111


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhcCCCCCcCCHHHHHHHHHH-HHhhccccHHHHHHHHHHHH
Q 010565          247 EFDALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKDGKLGIELTQDNLKALLLD-MFTGGTQTTATTVEWAMAEL  325 (507)
Q Consensus       247 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L  325 (507)
                      .+.++++                      +.++.++....+    .+++++++.++++. +.+++++|++++++|++++|
T Consensus       246 ~~~~~~~----------------------~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L  299 (480)
T PLN02648        246 KLYDFFR----------------------ASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWV  299 (480)
T ss_pred             HHHHHHH----------------------HHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            1111111                      112234433222    15999999999875 44677888888999999999


Q ss_pred             HhChH-HHHHHHHHHHHHhcc-CCCCCcccCCCcccHHHHHHhhcCCCCCCccccccccccccccc----CeeeCCCCEE
Q 010565          326 AKNPK-LLKKAQEEVRRVVKN-KSSINMDDVDQMHYLKCVIKESLRLHPAGTISFPRETSTSVNLG----GYDIPAKTIV  399 (507)
Q Consensus       326 ~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~----g~~ip~g~~v  399 (507)
                      ++||+ +|+++++|++++++. ++.++++++++||||++||+|+||+||+++... |.+.+|++++    ||.||||+.|
T Consensus       300 ~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V  378 (480)
T PLN02648        300 GRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEML  378 (480)
T ss_pred             HcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEE
Confidence            99995 999999999999863 456899999999999999999999999999975 8899999995    7999999999


Q ss_pred             EEehhhccCCCCCCCCCCccCCcccCCCCCCCCCCCcccccc---------CCCCCCCCChhHHHHHHHHHHHHHHhhce
Q 010565          400 YMNVWAIQRDPKVWDRAEEFLPERFINSTIDFNGQHFDFIPF---------GTGRRFCPGMLFGKVAAEYLLANLLYWFD  470 (507)
Q Consensus       400 ~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~pF---------g~G~r~C~G~~~a~~~~~~~l~~ll~~~~  470 (507)
                      +++.+.+||||++|+||++|||+||++++.+   ....+++|         |+|+|.|+|++||++|++++++.|+++|+
T Consensus       379 ~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~  455 (480)
T PLN02648        379 FGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYD  455 (480)
T ss_pred             EEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999875321   11234444         67789999999999999999999999998


Q ss_pred             -eecCCCC
Q 010565          471 -WKLPGGA  477 (507)
Q Consensus       471 -~~~~~~~  477 (507)
                       |++.++.
T Consensus       456 ~~~l~~~~  463 (480)
T PLN02648        456 SFEIEVDT  463 (480)
T ss_pred             EEeecCCc
Confidence             9987765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.8e-55  Score=418.45  Aligned_cols=360  Identities=27%  Similarity=0.429  Sum_probs=295.8

Q ss_pred             CchhHHHHHhhcCCeEEEecCCcC--eEEecCHHHHHHHHHHcCccccCCCCCCccc--ccccCCCceeecCCChhHHHH
Q 010565           52 PHRSLKDLSSKYGPLMFMHLGHSP--TLVVSSAEITRDIIKNHDIVFSNRPKTTAGD--VLLYGSKDIGFSSYGEYWREA  127 (507)
Q Consensus        52 ~~~~~~~~~~~yG~i~~~~~~~~~--~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  127 (507)
                      +......+.+.||.++.++..+..  .++++++++++++++++. .+++........  .....+.+.+...+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445566778889999988876654  899999999999999764 222222111110  111123444667789999999


Q ss_pred             HHHhhhccCchHHHhhhHHHHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhccccccccccCcchhHHHH
Q 010565          128 RKTCVLGLLSNKKVQSLHYVKEEEVAIMINKIRSSCLSRGSVSLAEMLQTVTNNIVSRSVLGRRVEEESTAGGKSNKFGE  207 (507)
Q Consensus       128 R~~l~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  207 (507)
                      |+++ .+.|+++.++.+.+.+.+.++++++.+ ..  + +..++.+.+..+++++++ .+||.+..+.       ..+..
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~--~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-------~~~~~  169 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQ--G-GADLVLDFAAELTLRVIA-ELLGVPLEDR-------PQLLR  169 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-cc--C-CchhHHHHhhhhhHHHHH-HHhCCCHHHH-------HHHHH
Confidence            9998 899999999999999999999999999 32  2 778899999999999999 9999987742       22222


Q ss_pred             HHHHHHHHhcCCccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCcchHHHHHHhhhhc
Q 010565          208 LSKRLLIQLGSISFRDLFPSFGWLDVVTGHIGRLKATTREFDALFDQVIEEHRISAMSHEDNDQSDKKDLVYALLKLQKD  287 (507)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~  287 (507)
                      .........        .|...    ......+..++...+.++++.+|++++          .....|+++.|+.+..+
T Consensus       170 ~~~~~~~~~--------~~~~~----~~~~~~~~~~a~~~~~~~~~~li~~rR----------~~~~~dlls~l~~a~~~  227 (411)
T COG2124         170 WSDALLLRL--------DPDLG----PEEPWRRARAARRELDAYLRALIAERR----------AAPRDDLLSLLLSAEDD  227 (411)
T ss_pred             HHHHHHhcc--------CcccC----CcccHHHHHHHHHHHHHHHHHHHHHhc----------cCCcccHHHHHHHHhhC
Confidence            222221110        01111    113467788889999999999999987          35677999999988766


Q ss_pred             CCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccCCCCCcccCCCcccHHHHHHhh
Q 010565          288 GKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNKSSINMDDVDQMHYLKCVIKES  367 (507)
Q Consensus       288 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~  367 (507)
                      ++  ..+|++||.++++++++||+|||+++++|+++.|++||++++++++|.+.                ||+.++|+|+
T Consensus       228 ~~--~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~  289 (411)
T COG2124         228 GG--GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEET  289 (411)
T ss_pred             CC--CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHH
Confidence            54  25999999999999999999999999999999999999999999998765                7899999999


Q ss_pred             cCCCCCCcccccccccccccccCeeeCCCCEEEEehhhccCCCCCCCCCCccCCcccCCCCCCCCCCCccccccCCCCCC
Q 010565          368 LRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFINSTIDFNGQHFDFIPFGTGRRF  447 (507)
Q Consensus       368 lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~  447 (507)
                      ||+|||++. .+|.+.+|++++|+.||||+.|+++++++||||++|++|++|||+||.          ..|+|||+|+|.
T Consensus       290 LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~  358 (411)
T COG2124         290 LRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHR  358 (411)
T ss_pred             HHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCcc
Confidence            999999999 779999999999999999999999999999999999999999999987          468999999999


Q ss_pred             CCChhHHHHHHHHHHHHHHhhceeecCCC
Q 010565          448 CPGMLFGKVAAEYLLANLLYWFDWKLPGG  476 (507)
Q Consensus       448 C~G~~~a~~~~~~~l~~ll~~~~~~~~~~  476 (507)
                      |+|+.||++|++++++.||++|++....+
T Consensus       359 ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         359 CLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             ccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            99999999999999999999999888765


No 33 
>PHA03049 IMV membrane protein; Provisional
Probab=72.13  E-value=13  Score=24.38  Aligned_cols=42  Identities=17%  Similarity=0.259  Sum_probs=22.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 010565            1 MLVSLLLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPGLPII   42 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~   42 (507)
                      |+.-+++++++++++-++++-.+.+.+.....||-|.-.+-.
T Consensus         1 MI~d~~l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~   42 (68)
T PHA03049          1 MIGDIILVIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKM   42 (68)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCChhhccCc
Confidence            555555555555555555555555555545555554444433


No 34 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=69.82  E-value=16  Score=24.17  Aligned_cols=35  Identities=29%  Similarity=0.341  Sum_probs=19.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 010565            1 MLVSLLLLLLLLLSPFLILRLKLSRNKSKLNLPPS   35 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg   35 (507)
                      |+..+++++++++++-++++-.+.+.+.....+|-
T Consensus         1 MI~d~iLi~ICVaii~lIlY~iYnr~~~~q~~~~~   35 (68)
T PF05961_consen    1 MIGDFILIIICVAIIGLILYGIYNRKKTTQNTNPS   35 (68)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCc
Confidence            56666666666666655655555555543334444


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=62.50  E-value=2  Score=36.26  Aligned_cols=44  Identities=16%  Similarity=0.323  Sum_probs=32.9

Q ss_pred             CcccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEE
Q 010565          356 QMHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYM  401 (507)
Q Consensus       356 ~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~  401 (507)
                      .-..+.|||.|+.-+......-  =+..+|+.++|..|||||.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            3455789999998776554432  2446789999999999998875


No 36 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=57.66  E-value=7.6  Score=25.22  Aligned_cols=8  Identities=38%  Similarity=0.729  Sum_probs=6.1

Q ss_pred             CCcccCCC
Q 010565          420 LPERFINS  427 (507)
Q Consensus       420 ~P~R~l~~  427 (507)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888864


No 37 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=57.11  E-value=24  Score=26.39  Aligned_cols=11  Identities=36%  Similarity=0.410  Sum_probs=7.4

Q ss_pred             CCCccccccCC
Q 010565           38 GLPIIGNLHQL   48 (507)
Q Consensus        38 ~~p~~G~~~~~   48 (507)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46888887544


No 38 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=55.04  E-value=53  Score=31.81  Aligned_cols=37  Identities=16%  Similarity=0.244  Sum_probs=21.6

Q ss_pred             hhcCCeEEEecCCcCeEEecCHHHHHHHHHHcCcccc
Q 010565           61 SKYGPLMFMHLGHSPTLVVSSAEITRDIIKNHDIVFS   97 (507)
Q Consensus        61 ~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~   97 (507)
                      -+||.|++-.+-++.+-|=.=|..-++=+.++..+|+
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            4788888877766655444444444444554555554


No 39 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=54.96  E-value=39  Score=20.95  Aligned_cols=42  Identities=17%  Similarity=0.279  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHH
Q 010565          298 NLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEV  339 (507)
Q Consensus       298 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (507)
                      ++...+..++=.|.+..+-.++--+....-||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666666777766666666666666999888877765


No 40 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=50.62  E-value=15  Score=26.86  Aligned_cols=19  Identities=26%  Similarity=0.338  Sum_probs=15.6

Q ss_pred             CCccccccCCCCCCCCChh
Q 010565          434 QHFDFIPFGTGRRFCPGML  452 (507)
Q Consensus       434 ~~~~~~pFg~G~r~C~G~~  452 (507)
                      ...+.+|||.|.-.|+|..
T Consensus       103 ~gss~~p~GaGaAaC~aAa  121 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAAA  121 (131)
T ss_pred             cCcccCCcCccHHHHHHHH
Confidence            4567899999999998753


No 41 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=48.60  E-value=60  Score=29.49  Aligned_cols=75  Identities=19%  Similarity=0.236  Sum_probs=57.4

Q ss_pred             HHHHHHhhhhcCCCCCcCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccCCCCCcccC--
Q 010565          277 LVYALLKLQKDGKLGIELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNKSSINMDDV--  354 (507)
Q Consensus       277 ll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~--  354 (507)
                      +.+.|.....      +-+-+.|.+++-.+-+.|.                .|...+.+.++-.-.+-.++.++...+  
T Consensus       332 Lrd~L~aL~T------PGtWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~GRInisGLN~  389 (410)
T KOG1412|consen  332 LRDHLVALKT------PGTWDHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDGRINISGLNM  389 (410)
T ss_pred             HHHHHHhcCC------CCcHHHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCCcEeeecccc
Confidence            5666665443      3457899999988888888                677777787777766777777877766  


Q ss_pred             CCcccHHHHHHhhcCCCCC
Q 010565          355 DQMHYLKCVIKESLRLHPA  373 (507)
Q Consensus       355 ~~lp~l~a~i~E~lRl~~~  373 (507)
                      +++.|+...|.|+.|-++.
T Consensus       390 ~NveyVAkAIde~Vr~~~~  408 (410)
T KOG1412|consen  390 KNVEYVAKAIDETVRAIKS  408 (410)
T ss_pred             ccHHHHHHHHHHHHHhhcc
Confidence            5799999999999997654


No 42 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.52  E-value=20  Score=24.01  Aligned_cols=33  Identities=24%  Similarity=0.355  Sum_probs=13.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc--CCCCCCCCC
Q 010565            3 VSLLLLLLLLLSPFLILRLKLSRN--KSKLNLPPS   35 (507)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Pg   35 (507)
                      +.+++.++++++.++.-.+..++.  +...++||.
T Consensus         5 lail~ivl~ll~G~~~G~fiark~~~k~lk~NPpi   39 (71)
T COG3763           5 LAILLIVLALLAGLIGGFFIARKQMKKQLKDNPPI   39 (71)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            344444444444444433433332  222456664


No 43 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=47.03  E-value=23  Score=27.15  Aligned_cols=8  Identities=13%  Similarity=0.181  Sum_probs=2.7

Q ss_pred             HHHhhcCC
Q 010565           21 LKLSRNKS   28 (507)
Q Consensus        21 ~~~~~~~~   28 (507)
                      |..+|.+|
T Consensus        86 y~irR~~K   93 (122)
T PF01102_consen   86 YCIRRLRK   93 (122)
T ss_dssp             HHHHHHS-
T ss_pred             HHHHHHhc
Confidence            33344333


No 44 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=46.32  E-value=22  Score=22.95  Aligned_cols=20  Identities=30%  Similarity=0.386  Sum_probs=16.5

Q ss_pred             HHHHHHHhChHHHHHHHHHH
Q 010565          320 WAMAELAKNPKLLKKAQEEV  339 (507)
Q Consensus       320 ~~l~~L~~~p~~~~~l~~Ei  339 (507)
                      -++.||.+||++.+++.+.-
T Consensus         4 ~iV~YLv~nPevl~kl~~g~   23 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGE   23 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCC
Confidence            35789999999999998743


No 45 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=46.25  E-value=76  Score=23.45  Aligned_cols=58  Identities=22%  Similarity=0.345  Sum_probs=38.5

Q ss_pred             CCCCCCCCCccccccCCCCCCchhHHHHHhhcCCeEEEecC------CcCeEEecCHHHHHHHHHH
Q 010565           32 LPPSPPGLPIIGNLHQLGSLPHRSLKDLSSKYGPLMFMHLG------HSPTLVVSSAEITRDIIKN   91 (507)
Q Consensus        32 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------~~~~vvv~dp~~i~~i~~~   91 (507)
                      .||-...+-++-|+..  +-..+-+.++.-+||+|..+++|      |.-+||-.|-.+++..+..
T Consensus        13 lppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   13 LPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3333333444444322  33456677889999999999987      4556777888888887764


No 46 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=43.91  E-value=10  Score=23.77  Aligned_cols=10  Identities=50%  Similarity=1.062  Sum_probs=8.8

Q ss_pred             ccCCCCCCCC
Q 010565          440 PFGTGRRFCP  449 (507)
Q Consensus       440 pFg~G~r~C~  449 (507)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            6999999994


No 47 
>PF15206 FAM209:  FAM209 family
Probab=43.52  E-value=19  Score=27.83  Aligned_cols=39  Identities=28%  Similarity=0.443  Sum_probs=25.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 010565            4 SLLLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPGLPII   42 (507)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~   42 (507)
                      +-++.++.++++++++++.-...+.+-+.|||..+.|+-
T Consensus        39 sKwlWL~Fvv~lyvilKf~g~~~K~keq~p~glrg~~fr   77 (150)
T PF15206_consen   39 SKWLWLLFVVVLYVILKFRGDSEKNKEQSPPGLRGCSFR   77 (150)
T ss_pred             hHHHHHHHHHHHHheeEeccCcccccccCCCccCcccCC
Confidence            344555556666667777665555556788898887654


No 48 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=40.52  E-value=76  Score=22.43  Aligned_cols=6  Identities=50%  Similarity=0.838  Sum_probs=3.4

Q ss_pred             CCCccc
Q 010565           38 GLPIIG   43 (507)
Q Consensus        38 ~~p~~G   43 (507)
                      .-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            456666


No 49 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=36.88  E-value=15  Score=27.22  Aligned_cols=28  Identities=25%  Similarity=0.478  Sum_probs=16.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 010565            1 MLVSLLLLLLLLLSPFLILRLKLSRNKS   28 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~   28 (507)
                      ++++++.++++++++++++.|..-|.++
T Consensus        64 ili~lls~v~IlVily~IyYFVILRer~   91 (101)
T PF06024_consen   64 ILISLLSFVCILVILYAIYYFVILRERQ   91 (101)
T ss_pred             hHHHHHHHHHHHHHHhhheEEEEEeccc
Confidence            3556666666666666666655545443


No 50 
>PF07438 DUF1514:  Protein of unknown function (DUF1514);  InterPro: IPR009999 This entry is represented by Bacteriophage phi PVL, Orf60. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several Staphylococcus aureus and related bacteriophage proteins of around 65 residues in length. The function of this family is unknown.
Probab=34.66  E-value=72  Score=20.98  Aligned_cols=20  Identities=20%  Similarity=0.258  Sum_probs=11.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHH
Q 010565            1 MLVSLLLLLLLLLSPFLILR   20 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~   20 (507)
                      ||+.+.+++++++++++...
T Consensus         1 MWIiiSIvLai~lLI~l~~n   20 (66)
T PF07438_consen    1 MWIIISIVLAIALLISLSVN   20 (66)
T ss_pred             ChhhHHHHHHHHHHHHHhhh
Confidence            66666666666655555543


No 51 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=34.61  E-value=1.2e+02  Score=19.05  Aligned_cols=36  Identities=22%  Similarity=0.231  Sum_probs=25.6

Q ss_pred             HHHHHhhcCCeEEEecCC----cCeEEecCHHHHHHHHHH
Q 010565           56 LKDLSSKYGPLMFMHLGH----SPTLVVSSAEITRDIIKN   91 (507)
Q Consensus        56 ~~~~~~~yG~i~~~~~~~----~~~vvv~dp~~i~~i~~~   91 (507)
                      +.+...+||+|-++.+..    .-.|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            356788999998877643    345667789988888764


No 52 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=34.38  E-value=8.7  Score=36.42  Aligned_cols=44  Identities=14%  Similarity=0.291  Sum_probs=32.8

Q ss_pred             cccHHHHHHhhcCCCCCCcccccccccccccccCeeeCCCCEEEEe
Q 010565          357 MHYLKCVIKESLRLHPAGTISFPRETSTSVNLGGYDIPAKTIVYMN  402 (507)
Q Consensus       357 lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~  402 (507)
                      -..+.|||.|+.-+.-....-  =+..+|+.++|..||+||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEEE
Confidence            456789999998887553332  24467899999999999988644


No 53 
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=32.83  E-value=3.3e+02  Score=25.53  Aligned_cols=59  Identities=15%  Similarity=0.177  Sum_probs=47.0

Q ss_pred             cCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHhccCCCCCcccC--CCcccHHHHHHhh
Q 010565          293 ELTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVVKNKSSINMDDV--DQMHYLKCVIKES  367 (507)
Q Consensus       293 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~--~~lp~l~a~i~E~  367 (507)
                      ..+-+.|..++-.|.+.|.                +|+..+++..|-.-.+-.++.++...+  ++.+||.-.|.++
T Consensus       362 ~~~W~hI~~QIGMF~fTgl----------------~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~v  422 (427)
T KOG1411|consen  362 PGNWSHITKQIGMFCFTGL----------------NPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAV  422 (427)
T ss_pred             CccHHHHHHhhheeeecCC----------------CHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhH
Confidence            3467889999999999998                999999999998877777777777655  5688886665543


No 54 
>PRK06789 flagellar motor switch protein; Validated
Probab=32.63  E-value=45  Score=22.96  Aligned_cols=40  Identities=20%  Similarity=0.231  Sum_probs=31.7

Q ss_pred             HHHhhcCCCCCCcccccccccccc--cccCeeeCCCCEEEEe
Q 010565          363 VIKESLRLHPAGTISFPRETSTSV--NLGGYDIPAKTIVYMN  402 (507)
Q Consensus       363 ~i~E~lRl~~~~~~~~~R~~~~~~--~~~g~~ip~g~~v~~~  402 (507)
                      -++|.+.+.+.....+.|.+.+.+  .++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            378899999887777777777654  4599999999988764


No 55 
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=31.73  E-value=2e+02  Score=20.68  Aligned_cols=66  Identities=14%  Similarity=0.223  Sum_probs=40.4

Q ss_pred             ChhHHHHHHHhhh--ccCchHHHhhhH-----HHHHHHHHHHHHHHHhhccCCCcee---HHHHHHHHHHHHHHHHHh
Q 010565          121 GEYWREARKTCVL--GLLSNKKVQSLH-----YVKEEEVAIMINKIRSSCLSRGSVS---LAEMLQTVTNNIVSRSVL  188 (507)
Q Consensus       121 g~~w~~~R~~l~~--~~~~~~~l~~~~-----~~~~~~~~~li~~l~~~~~~~~~vd---~~~~~~~~~~~~i~~~~f  188 (507)
                      |.+|++.-+.+..  .+++...++.+.     .-+.+.+..++.+|...  +|....   +...+..+-++.+..-++
T Consensus        13 Gr~WK~laR~Lg~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~--eg~~Atv~~Lv~AL~~c~l~~lAe~l~   88 (90)
T cd08780          13 GKKWKPVGRSLQKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQS--EGKKATLQRLVQALEENGLTSLAEDLL   88 (90)
T ss_pred             hHHHHHHHHHHcccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHh--ccccchHHHHHHHHHHccchHHHHHHh
Confidence            8899998887721  247777777654     34778899999999876  233222   334444444444444433


No 56 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=30.09  E-value=1.9e+02  Score=20.14  Aligned_cols=18  Identities=11%  Similarity=0.240  Sum_probs=8.4

Q ss_pred             HHHHHHHHHHHHHHHhhc
Q 010565            9 LLLLLSPFLILRLKLSRN   26 (507)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~   26 (507)
                      ++++.+.+++....+++.
T Consensus        10 ~V~V~IVclliya~YRR~   27 (92)
T PHA02681         10 VIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            344444444444555554


No 57 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=29.43  E-value=48  Score=25.79  Aligned_cols=23  Identities=17%  Similarity=0.326  Sum_probs=16.9

Q ss_pred             CCCCChhHHHHHHHHHHHHHHhh
Q 010565          446 RFCPGMLFGKVAAEYLLANLLYW  468 (507)
Q Consensus       446 r~C~G~~~a~~~~~~~l~~ll~~  468 (507)
                      ..|.|++||+.++-.++..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            57999999999999999999873


No 58 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=28.64  E-value=2.2e+02  Score=20.28  Aligned_cols=50  Identities=12%  Similarity=0.113  Sum_probs=41.2

Q ss_pred             CCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHHh
Q 010565          294 LTQDNLKALLLDMFTGGTQTTATTVEWAMAELAKNPKLLKKAQEEVRRVV  343 (507)
Q Consensus       294 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  343 (507)
                      -..+.........++-=+..++....-.+.+.++||+...++.+.+.+-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555666667788889999999999999999999999999988887654


No 59 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=28.18  E-value=81  Score=28.79  Aligned_cols=69  Identities=16%  Similarity=0.304  Sum_probs=42.7

Q ss_pred             HHHHHhhcCCCCCC---ccccccccccccccc----CeeeCCCCEEEEehhhccCCCCCCCCCCccCCcccCCCCCCCCC
Q 010565          361 KCVIKESLRLHPAG---TISFPRETSTSVNLG----GYDIPAKTIVYMNVWAIQRDPKVWDRAEEFLPERFINSTIDFNG  433 (507)
Q Consensus       361 ~a~i~E~lRl~~~~---~~~~~R~~~~~~~~~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~  433 (507)
                      +.+|+.|..++||.   |+.+.-.++.|.++=    .-+|..||.|.++                              +
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------G  325 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------G  325 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------C
Confidence            67888899999974   444444455554431    3567888866443                              2


Q ss_pred             CCccccccCCCCCCCCChhHHHHHHHHHH
Q 010565          434 QHFDFIPFGTGRRFCPGMLFGKVAAEYLL  462 (507)
Q Consensus       434 ~~~~~~pFg~G~r~C~G~~~a~~~~~~~l  462 (507)
                      ++++++-||.+  +-.|+++|. |+|.++
T Consensus       326 spYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         326 SPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence            34444545443  346999998 777654


No 60 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=27.49  E-value=40  Score=23.88  Aligned_cols=20  Identities=25%  Similarity=0.459  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHhhceeecCC
Q 010565          456 VAAEYLLANLLYWFDWKLPG  475 (507)
Q Consensus       456 ~~~~~~l~~ll~~~~~~~~~  475 (507)
                      .-|+-++..+|+-|||+|.+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            35788999999999999975


No 61 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=26.87  E-value=54  Score=18.12  Aligned_cols=16  Identities=31%  Similarity=0.814  Sum_probs=13.4

Q ss_pred             CCccccccCCCCCCCC
Q 010565          434 QHFDFIPFGTGRRFCP  449 (507)
Q Consensus       434 ~~~~~~pFg~G~r~C~  449 (507)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4568999999999994


No 62 
>PF10777 YlaC:  Inner membrane protein YlaC;  InterPro: IPR019713  The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis []. 
Probab=25.18  E-value=45  Score=26.34  Aligned_cols=38  Identities=18%  Similarity=0.511  Sum_probs=30.3

Q ss_pred             HHHHHhChHHHHHHHHHHHHHhccCCCCCcccCCCccc
Q 010565          322 MAELAKNPKLLKKAQEEVRRVVKNKSSINMDDVDQMHY  359 (507)
Q Consensus       322 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~  359 (507)
                      +-.++++|++-+.+.++++..+..++.+++-|.-.+.|
T Consensus       115 i~~iL~~p~V~~~~K~~i~~i~~~Kgei~FYDVy~la~  152 (155)
T PF10777_consen  115 IDKILQSPQVPDEIKQGIQRIISTKGEISFYDVYSLAY  152 (155)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHhCCceeEEEeEEeec
Confidence            34567799999999999999999888888777655544


No 63 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.83  E-value=1.5e+02  Score=23.06  Aligned_cols=39  Identities=15%  Similarity=0.349  Sum_probs=30.2

Q ss_pred             CchhHHHHHhhcCCeEEEecCCcCeEEecCHHHHHHHHHHc
Q 010565           52 PHRSLKDLSSKYGPLMFMHLGHSPTLVVSSAEITRDIIKNH   92 (507)
Q Consensus        52 ~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~i~~i~~~~   92 (507)
                      ....+.+|.++||.+--.  .+..++...|++.++++...+
T Consensus        76 v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            356788999999976542  246678899999999998754


No 64 
>PHA02902 putative IMV membrane protein; Provisional
Probab=23.43  E-value=2.3e+02  Score=18.70  Aligned_cols=19  Identities=16%  Similarity=0.277  Sum_probs=9.1

Q ss_pred             HHHHHHHHHHHHHHhhcCC
Q 010565           10 LLLLSPFLILRLKLSRNKS   28 (507)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~   28 (507)
                      +++++.+++....+++.++
T Consensus        11 v~v~Ivclliya~YrR~kc   29 (70)
T PHA02902         11 VIVIIFCLLIYAAYKRYKC   29 (70)
T ss_pred             HHHHHHHHHHHHHHHHhcC
Confidence            3333444444455666554


No 65 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=23.36  E-value=87  Score=19.93  Aligned_cols=18  Identities=17%  Similarity=0.255  Sum_probs=15.8

Q ss_pred             cCCeEEEecCCcCeEEec
Q 010565           63 YGPLMFMHLGHSPTLVVS   80 (507)
Q Consensus        63 yG~i~~~~~~~~~~vvv~   80 (507)
                      -|+++++..||..++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            489999999999998874


No 66 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=22.77  E-value=94  Score=24.84  Aligned_cols=40  Identities=23%  Similarity=0.431  Sum_probs=25.8

Q ss_pred             ccccccccCeeeCCCCEEEEehh-------hccCCCCCCCCCCccCCc
Q 010565          382 TSTSVNLGGYDIPAKTIVYMNVW-------AIQRDPKVWDRAEEFLPE  422 (507)
Q Consensus       382 ~~~~~~~~g~~ip~g~~v~~~~~-------~~~~d~~~~~~p~~F~P~  422 (507)
                      ..+|+.++|..||+|+.-+....       -+|++...|-. ..+||+
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            34789999999999986654442       34556666644 444443


No 67 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=22.11  E-value=88  Score=25.28  Aligned_cols=39  Identities=26%  Similarity=0.393  Sum_probs=29.8

Q ss_pred             CCCCchhHHHHHhhcC-CeEEEecCCc-C---eEEecCHHHHHH
Q 010565           49 GSLPHRSLKDLSSKYG-PLMFMHLGHS-P---TLVVSSAEITRD   87 (507)
Q Consensus        49 ~~~~~~~~~~~~~~yG-~i~~~~~~~~-~---~vvv~dp~~i~~   87 (507)
                      ++...+-.+++.+++| |+++++++|. |   -+|++||-.+-.
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGv  196 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGV  196 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhh
Confidence            4566778889999999 8999998763 2   378999876544


No 68 
>PLN02687 flavonoid 3'-monooxygenase
Probab=22.10  E-value=1.1e+02  Score=30.81  Aligned_cols=34  Identities=35%  Similarity=0.395  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 010565            6 LLLLLLLLSPFLILRLKLSRNKSKLNLPPSPPGL   39 (507)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~   39 (507)
                      .+++++++++++++.+++.+.+.+.+..+.|++-
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp   39 (517)
T PLN02687          6 PLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGP   39 (517)
T ss_pred             hHHHHHHHHHHHHHHHHhccccCCCCCCCCCccC
Confidence            3344455555556666666666666666676653


No 69 
>KOG3054 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.39  E-value=1.3e+02  Score=26.08  Aligned_cols=27  Identities=22%  Similarity=0.185  Sum_probs=15.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcC
Q 010565            1 MLVSLLLLLLLLLSPFLILRLKLSRNK   27 (507)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   27 (507)
                      |..++++++++++++.+++.++|++.+
T Consensus         1 m~~~v~vlVaa~llV~~i~l~l~~r~r   27 (299)
T KOG3054|consen    1 MEEIVAVLVAAALLVAVILLFLWKRRR   27 (299)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            455566666666555555556666554


No 70 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=21.27  E-value=1.5e+02  Score=29.38  Aligned_cols=31  Identities=23%  Similarity=0.218  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC
Q 010565           10 LLLLSPFLILRLKLSRNKSKLNLPPSPPGLP   40 (507)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p   40 (507)
                      +++++.++++.++....+++...+|+|++.+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~   41 (463)
T PLN02196         11 FAGALFLCLLRFLAGFRRSSSTKLPLPPGTM   41 (463)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence            3333444444455555778888999999755


No 71 
>PHA03162 hypothetical protein; Provisional
Probab=21.19  E-value=81  Score=24.31  Aligned_cols=24  Identities=21%  Similarity=0.227  Sum_probs=19.9

Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHH
Q 010565          442 GTGRRFCPGMLFGKVAAEYLLANL  465 (507)
Q Consensus       442 g~G~r~C~G~~~a~~~~~~~l~~l  465 (507)
                      ++|.+.|||+...+-++..=|++|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999998888887777665


No 72 
>PRK01844 hypothetical protein; Provisional
Probab=20.96  E-value=85  Score=21.38  Aligned_cols=6  Identities=33%  Similarity=0.534  Sum_probs=2.9

Q ss_pred             CCCCCC
Q 010565           30 LNLPPS   35 (507)
Q Consensus        30 ~~~~Pg   35 (507)
                      .++||.
T Consensus        34 k~NPpi   39 (72)
T PRK01844         34 QKNPPI   39 (72)
T ss_pred             HHCCCC
Confidence            345553


No 73 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.17  E-value=1.8e+02  Score=20.49  Aligned_cols=39  Identities=13%  Similarity=0.290  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHh--ChHHHHHHHHHHHHHhccCCCCCccc
Q 010565          315 ATTVEWAMAELAK--NPKLLKKAQEEVRRVVKNKSSINMDD  353 (507)
Q Consensus       315 ~~~l~~~l~~L~~--~p~~~~~l~~Ei~~~~~~~~~~~~~~  353 (507)
                      +-+++|+++.|-+  .+--++.|++.+.+.+.+-..++.+.
T Consensus        13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~   53 (80)
T PF10264_consen   13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEV   53 (80)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHH
Confidence            3456666666654  34567888888888776544444333


Done!