Query 010567
Match_columns 507
No_of_seqs 205 out of 3064
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 02:02:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010567.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010567hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0472 Leucine-rich repeat pr 100.0 8E-49 1.7E-53 343.2 -5.1 472 6-506 82-565 (565)
2 PLN00113 leucine-rich repeat r 100.0 1.5E-42 3.2E-47 372.0 31.5 471 5-491 83-569 (968)
3 PLN00113 leucine-rich repeat r 100.0 4E-42 8.7E-47 368.7 31.5 462 6-483 108-585 (968)
4 KOG4194 Membrane glycoprotein 100.0 4.9E-36 1.1E-40 275.1 8.3 378 17-453 54-447 (873)
5 KOG4194 Membrane glycoprotein 100.0 4.9E-36 1.1E-40 275.0 6.8 375 63-495 54-442 (873)
6 KOG0472 Leucine-rich repeat pr 100.0 5.6E-38 1.2E-42 275.3 -14.0 440 10-489 40-525 (565)
7 KOG0618 Serine/threonine phosp 100.0 3.8E-35 8.2E-40 283.0 -2.7 437 9-492 39-499 (1081)
8 KOG0444 Cytoskeletal regulator 100.0 4.2E-35 9.1E-40 271.3 -3.5 362 37-484 6-377 (1255)
9 KOG0444 Cytoskeletal regulator 100.0 2.6E-34 5.7E-39 266.0 -2.7 364 12-456 4-373 (1255)
10 KOG0618 Serine/threonine phosp 100.0 3.3E-32 7.2E-37 262.9 -1.6 452 6-485 12-468 (1081)
11 PLN03210 Resistant to P. syrin 99.9 1.1E-23 2.3E-28 226.7 27.3 338 8-455 551-903 (1153)
12 PLN03210 Resistant to P. syrin 99.9 2.6E-23 5.7E-28 223.7 26.7 302 109-480 590-904 (1153)
13 PRK15387 E3 ubiquitin-protein 99.9 3.7E-21 8.1E-26 192.3 19.3 256 133-458 203-458 (788)
14 KOG4237 Extracellular matrix p 99.9 1.2E-23 2.6E-28 185.2 0.6 192 300-497 270-492 (498)
15 PRK15387 E3 ubiquitin-protein 99.9 6E-21 1.3E-25 190.8 17.8 195 15-235 201-395 (788)
16 KOG4237 Extracellular matrix p 99.8 5.1E-22 1.1E-26 175.0 -2.3 377 41-491 49-466 (498)
17 PRK15370 E3 ubiquitin-protein 99.8 3.1E-19 6.8E-24 179.8 14.9 179 17-234 180-358 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 2.9E-19 6.3E-24 180.1 14.4 80 399-482 346-428 (754)
19 KOG0617 Ras suppressor protein 99.7 5.6E-20 1.2E-24 143.6 -3.8 160 36-196 31-192 (264)
20 KOG0617 Ras suppressor protein 99.7 1.8E-19 3.8E-24 140.8 -3.1 201 300-502 29-232 (264)
21 cd00116 LRR_RI Leucine-rich re 99.7 3.3E-17 7.2E-22 153.9 3.5 125 20-144 3-150 (319)
22 cd00116 LRR_RI Leucine-rich re 99.6 6.8E-16 1.5E-20 145.1 6.8 229 7-235 15-291 (319)
23 KOG0532 Leucine-rich repeat (L 99.5 4.7E-16 1E-20 144.1 -6.3 212 42-255 54-267 (722)
24 KOG1909 Ran GTPase-activating 99.4 1.5E-14 3.2E-19 126.6 -1.9 227 8-234 23-310 (382)
25 KOG0532 Leucine-rich repeat (L 99.3 3.9E-14 8.4E-19 131.6 -4.7 211 286-502 55-267 (722)
26 PF14580 LRR_9: Leucine-rich r 99.3 2.1E-12 4.5E-17 106.3 4.7 108 36-145 17-127 (175)
27 COG4886 Leucine-rich repeat (L 99.3 4.6E-12 9.9E-17 122.5 7.6 194 20-214 98-292 (394)
28 COG4886 Leucine-rich repeat (L 99.3 4.9E-12 1.1E-16 122.3 7.4 201 42-244 97-299 (394)
29 KOG1259 Nischarin, modulator o 99.3 8E-13 1.7E-17 113.4 1.4 129 351-484 284-414 (490)
30 KOG3207 Beta-tubulin folding c 99.3 1.2E-12 2.7E-17 118.0 1.6 183 10-192 116-316 (505)
31 PF14580 LRR_9: Leucine-rich r 99.3 4.8E-12 1E-16 104.2 4.5 125 13-139 17-148 (175)
32 KOG1909 Ran GTPase-activating 99.2 2.5E-12 5.4E-17 112.9 2.0 208 276-483 25-284 (382)
33 KOG1259 Nischarin, modulator o 99.2 2.7E-12 5.8E-17 110.2 2.0 132 106-238 282-415 (490)
34 KOG3207 Beta-tubulin folding c 99.2 2.2E-12 4.7E-17 116.4 0.7 199 282-481 122-338 (505)
35 KOG4658 Apoptotic ATPase [Sign 99.1 1.8E-10 3.8E-15 119.0 6.1 138 49-188 512-653 (889)
36 KOG4658 Apoptotic ATPase [Sign 99.0 2.6E-10 5.6E-15 117.8 4.4 197 38-236 523-731 (889)
37 KOG0531 Protein phosphatase 1, 99.0 1.6E-10 3.4E-15 111.8 2.2 221 11-236 91-319 (414)
38 KOG0531 Protein phosphatase 1, 98.9 1.7E-10 3.6E-15 111.6 -0.7 196 282-485 73-271 (414)
39 PF13855 LRR_8: Leucine rich r 98.8 2.1E-09 4.5E-14 72.7 2.6 58 423-480 2-60 (61)
40 PF13855 LRR_8: Leucine rich r 98.7 8E-09 1.7E-13 69.8 3.4 59 352-410 2-60 (61)
41 PLN03150 hypothetical protein; 98.6 5.7E-08 1.2E-12 98.5 7.7 104 377-480 420-526 (623)
42 KOG1859 Leucine-rich repeat pr 98.6 3E-10 6.4E-15 109.2 -8.1 156 8-167 102-292 (1096)
43 KOG1859 Leucine-rich repeat pr 98.6 2.1E-10 4.5E-15 110.3 -10.4 179 297-482 102-292 (1096)
44 COG5238 RNA1 Ran GTPase-activa 98.5 2.2E-08 4.7E-13 85.4 1.3 181 10-190 25-255 (388)
45 PLN03150 hypothetical protein; 98.5 4.5E-07 9.7E-12 92.0 9.0 104 353-456 420-526 (623)
46 KOG2120 SCF ubiquitin ligase, 98.5 2.9E-09 6.4E-14 91.8 -5.7 148 40-187 187-348 (419)
47 KOG4579 Leucine-rich repeat (L 98.4 2.1E-08 4.5E-13 76.3 -2.4 107 40-147 29-139 (177)
48 KOG1644 U2-associated snRNP A' 98.4 6.7E-07 1.5E-11 73.1 5.9 104 41-145 22-127 (233)
49 KOG2120 SCF ubiquitin ligase, 98.4 9.5E-09 2.1E-13 88.7 -5.0 175 304-479 185-373 (419)
50 PRK15386 type III secretion pr 98.4 4.7E-06 1E-10 77.7 11.5 32 422-455 156-187 (426)
51 PF12799 LRR_4: Leucine Rich r 98.3 3.6E-07 7.7E-12 56.2 2.6 38 423-460 2-39 (44)
52 KOG4579 Leucine-rich repeat (L 98.3 2.3E-08 4.9E-13 76.1 -3.4 112 61-172 27-141 (177)
53 KOG4341 F-box protein containi 98.3 3.9E-08 8.4E-13 89.0 -3.9 106 373-479 318-436 (483)
54 KOG2982 Uncharacterized conser 98.3 2.2E-07 4.7E-12 80.5 0.4 155 303-458 70-262 (418)
55 KOG4341 F-box protein containi 98.3 2.9E-08 6.3E-13 89.8 -5.1 172 17-188 140-331 (483)
56 PF12799 LRR_4: Leucine Rich r 98.2 7.9E-07 1.7E-11 54.7 2.4 41 445-486 1-41 (44)
57 PF13306 LRR_5: Leucine rich r 98.2 5.2E-06 1.1E-10 66.2 6.8 35 348-383 9-43 (129)
58 COG5238 RNA1 Ran GTPase-activa 98.2 1.2E-06 2.5E-11 75.1 2.6 222 280-501 29-309 (388)
59 PRK15386 type III secretion pr 98.1 1.2E-05 2.7E-10 75.0 9.2 134 323-480 48-188 (426)
60 KOG3665 ZYG-1-like serine/thre 98.1 1.4E-06 3.1E-11 88.2 2.8 104 304-409 122-230 (699)
61 KOG1644 U2-associated snRNP A' 98.1 5.9E-06 1.3E-10 67.7 5.5 100 330-431 45-149 (233)
62 KOG2982 Uncharacterized conser 98.1 2.6E-06 5.7E-11 74.0 2.9 211 18-228 48-285 (418)
63 KOG3665 ZYG-1-like serine/thre 98.0 2.7E-06 5.9E-11 86.2 3.1 128 38-167 122-263 (699)
64 PF13306 LRR_5: Leucine rich r 98.0 1.8E-05 3.8E-10 63.1 7.1 120 323-448 8-129 (129)
65 KOG2123 Uncharacterized conser 97.2 2.5E-05 5.3E-10 67.4 -3.1 79 62-143 20-100 (388)
66 KOG2739 Leucine-rich acidic nu 97.0 0.00037 8E-09 60.1 1.8 114 30-144 35-156 (260)
67 KOG2739 Leucine-rich acidic nu 97.0 0.00044 9.6E-09 59.6 2.3 12 422-433 116-127 (260)
68 KOG2123 Uncharacterized conser 97.0 3.9E-05 8.4E-10 66.3 -4.1 79 14-94 18-98 (388)
69 KOG1947 Leucine rich repeat pr 96.5 0.00048 1E-08 68.8 -1.3 108 280-387 187-307 (482)
70 PF00560 LRR_1: Leucine Rich R 96.1 0.003 6.5E-08 32.1 1.1 19 424-442 2-20 (22)
71 PF13504 LRR_7: Leucine rich r 95.5 0.01 2.2E-07 27.8 1.5 14 424-437 3-16 (17)
72 KOG1947 Leucine rich repeat pr 95.4 0.0035 7.5E-08 62.7 -0.4 34 303-336 187-223 (482)
73 PF00560 LRR_1: Leucine Rich R 95.4 0.0083 1.8E-07 30.4 1.0 18 17-34 2-19 (22)
74 PF13504 LRR_7: Leucine rich r 95.1 0.0099 2.1E-07 27.9 0.8 15 470-484 2-16 (17)
75 smart00369 LRR_TYP Leucine-ric 95.0 0.023 4.9E-07 30.2 2.1 22 469-490 2-23 (26)
76 smart00370 LRR Leucine-rich re 95.0 0.023 4.9E-07 30.2 2.1 22 469-490 2-23 (26)
77 KOG0473 Leucine-rich repeat pr 95.0 0.0012 2.5E-08 55.8 -4.4 90 8-97 35-124 (326)
78 KOG3864 Uncharacterized conser 94.2 0.0045 9.7E-08 51.3 -2.6 81 352-432 102-186 (221)
79 smart00369 LRR_TYP Leucine-ric 94.2 0.043 9.4E-07 29.1 2.0 22 444-465 1-22 (26)
80 smart00370 LRR Leucine-rich re 94.2 0.043 9.4E-07 29.1 2.0 22 444-465 1-22 (26)
81 KOG4308 LRR-containing protein 94.0 0.00085 1.8E-08 65.4 -8.4 175 17-191 89-304 (478)
82 KOG4308 LRR-containing protein 93.1 0.00049 1.1E-08 67.0 -11.9 174 40-213 89-304 (478)
83 KOG3864 Uncharacterized conser 92.8 0.01 2.2E-07 49.3 -2.8 81 375-455 101-186 (221)
84 KOG0473 Leucine-rich repeat pr 90.8 0.0069 1.5E-07 51.4 -5.8 86 371-457 38-123 (326)
85 PF13516 LRR_6: Leucine Rich r 87.9 0.24 5.2E-06 25.6 0.7 18 469-486 2-19 (24)
86 smart00364 LRR_BAC Leucine-ric 86.4 0.49 1.1E-05 24.9 1.3 17 423-439 3-19 (26)
87 smart00365 LRR_SD22 Leucine-ri 79.5 1.6 3.6E-05 23.1 1.7 16 469-484 2-17 (26)
88 KOG3763 mRNA export factor TAP 70.0 3.9 8.5E-05 40.0 2.8 63 396-458 215-283 (585)
89 smart00367 LRR_CC Leucine-rich 68.0 4.1 9E-05 21.4 1.5 11 445-455 2-12 (26)
90 smart00368 LRR_RI Leucine rich 65.8 6.4 0.00014 21.1 2.0 15 469-483 2-16 (28)
91 KOG4242 Predicted myosin-I-bin 63.0 41 0.00089 32.7 7.8 58 108-165 214-279 (553)
92 KOG3763 mRNA export factor TAP 53.3 7.9 0.00017 38.1 1.6 64 372-435 215-283 (585)
93 PRK09718 hypothetical protein; 21.5 2.6E+02 0.0057 27.6 6.0 172 263-460 72-243 (512)
No 1
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=8e-49 Score=343.15 Aligned_cols=472 Identities=42% Similarity=0.637 Sum_probs=392.0
Q ss_pred ecHHhhcccCCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCC
Q 010567 6 FLLYVFDRLHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 85 (507)
Q Consensus 6 ~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~ 85 (507)
.+|++++++..++.++.+++++..+|..+....++..++++++.++++|+.++.+..+..++-.+|+++.+|.++..+.+
T Consensus 82 ~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~ 161 (565)
T KOG0472|consen 82 QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSK 161 (565)
T ss_pred hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhccccccccCchHHHHHHH
Confidence 57888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcCCCcccccchhhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCC
Q 010567 86 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 165 (507)
Q Consensus 86 L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~ 165 (507)
|..+++.+|++...++.... ++.|++++...|.++.+|+.++.+.+|..|++++|.+..+| .|..|..|.++.++.|.
T Consensus 162 l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~ 239 (565)
T KOG0472|consen 162 LSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQ 239 (565)
T ss_pred HHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccH
Confidence 99999999999999988666 99999999999999999999999999999999999999998 89999999999999999
Q ss_pred CccCCcccc-CCCCCCEEEcCCCcccccchhhhccc-cCeEECCCCCCCCCCccccCCCCccEEEccCCccccccccccC
Q 010567 166 LSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 243 (507)
Q Consensus 166 ~~~l~~~l~-~~~~L~~L~l~~~~~~~~~~~~~~~~-L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~ 243 (507)
+..+|++.. .++++..||+.+|+++.+|...+... |+.+|+++|.++++|..++++ +|+.|-+.||++.++...+..
T Consensus 240 i~~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~ 318 (565)
T KOG0472|consen 240 IEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIIS 318 (565)
T ss_pred HHhhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHc
Confidence 999988765 88999999999999999999999888 999999999999999999999 999999999999999999999
Q ss_pred CCCHHHHHHHHhcCCCCCccccccchhhh------hhhhhccccccceEEecCCCCCCCChhhhcCCC---ccEEEcCCC
Q 010567 244 GPTPALLKYLRSRLPENEDSEASTTKEDL------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRN 314 (507)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~---L~~L~l~~~ 314 (507)
+.+.+.+++++..+............+.. .........+.+.+++++-.++.+|...+.... +...+++.|
T Consensus 319 ~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskN 398 (565)
T KOG0472|consen 319 KGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKN 398 (565)
T ss_pred ccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccc
Confidence 99999999999855444332222111111 111112224456666777777777777665444 667777777
Q ss_pred ccCcCCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCC
Q 010567 315 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 394 (507)
Q Consensus 315 ~~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 394 (507)
++.++|..+..+..+...-+..++..+..+..++.+++|..|++++|.+..+| ..
T Consensus 399 qL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP-------------------------~e 453 (565)
T KOG0472|consen 399 QLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLP-------------------------EE 453 (565)
T ss_pred hHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcc-------------------------hh
Confidence 77777766655554433322223333333334455555555555555444444 33
Q ss_pred CCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccc-cccCCCCCCeEeCCCCCCCCCCCcccCCCccCce
Q 010567 395 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 473 (507)
Q Consensus 395 ~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~-~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~ 473 (507)
++.+-.|++++++.|++..+|.++.....++.+..++|++.++++ ++.+|.+|..||+.+|++..+|+.++.+ .+|+.
T Consensus 454 ~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~Lgnm-tnL~h 532 (565)
T KOG0472|consen 454 MGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNM-TNLRH 532 (565)
T ss_pred hhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccc-cceeE
Confidence 455667999999999999999999998999999999999999965 4999999999999999999999998887 99999
Q ss_pred EeccCCCCCCccHHHHhhhHHHHHHHHHhcCCC
Q 010567 474 LRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 506 (507)
Q Consensus 474 L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (507)
|+++||+|+.-+....-..+.+++.|++++||-
T Consensus 533 LeL~gNpfr~Pr~~iLmkgT~aiL~ylrdrIpt 565 (565)
T KOG0472|consen 533 LELDGNPFRQPRHQILMKGTAAILSYLRDRIPT 565 (565)
T ss_pred EEecCCccCCCHHHHhccChHHHHHHhcccCCC
Confidence 999999999888888999999999999999983
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.5e-42 Score=372.03 Aligned_cols=471 Identities=30% Similarity=0.387 Sum_probs=369.2
Q ss_pred eecHHhhcccCCCCEEEcCCCccc-ccCccc-cCCCcccEEeCCCCCCC-CCchhhhcccCCCeEEcCCCcCc-cCCccc
Q 010567 5 WFLLYVFDRLHMLKSLDVSFNSIM-KIPDEI-GSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDL 80 (507)
Q Consensus 5 ~~~~~~~~~~~~L~~L~l~~~~i~-~~~~~~-~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~~-~l~~~~ 80 (507)
+.++.+|..+++|+.|++++|.+. .+|..+ ..+++|++|++++|.+. .+|. ..+++|++|++++|.+. .+|..+
T Consensus 83 ~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~ 160 (968)
T PLN00113 83 GKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDI 160 (968)
T ss_pred ccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHH
Confidence 456778999999999999999887 677764 48899999999999886 4553 45778999999999887 678888
Q ss_pred cCCCCCcEEEcCCCcccccchhhhcCccccceeecCCcccc-cccccccCCCcccEEeccCCccc-cCCCCCcCCCCCcE
Q 010567 81 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN-GMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAE 158 (507)
Q Consensus 81 ~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~ 158 (507)
..+++|++|++++|.+....+..+.++++|++|++++|.+. .+|..+..+++|+.|++++|.+. .+|..+.++++|++
T Consensus 161 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 240 (968)
T PLN00113 161 GSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNH 240 (968)
T ss_pred hcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCE
Confidence 89999999999999887655556889999999999998875 56788888999999999999887 67888889999999
Q ss_pred EEcCCCCCc-cCCccccCCCCCCEEEcCCCcccc-cchhhhcc-ccCeEECCCCCCCC-CCccccCCCCccEEEccCCcc
Q 010567 159 FYMGNNALS-ALPAELGKLSKLGTLDLHSNQLKE-YCVEACQL-RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 234 (507)
Q Consensus 159 L~l~~~~~~-~l~~~l~~~~~L~~L~l~~~~~~~-~~~~~~~~-~L~~l~l~~~~~~~-~~~~l~~l~~L~~L~l~~~~~ 234 (507)
|++++|.+. .+|..++.+++|++|++++|.+.. ++...... +|++|++++|.+.+ +|..+..+++|+.|++++|.+
T Consensus 241 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 320 (968)
T PLN00113 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNF 320 (968)
T ss_pred EECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCcc
Confidence 999999877 678888889999999999988764 44444333 48999999998876 677788889999999988877
Q ss_pred ccccccccCC-CCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCC-CCChhhhcCCCccEEEcC
Q 010567 235 RTLRSSLVNG-PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLS 312 (507)
Q Consensus 235 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-~~~~~~~~~~~L~~L~l~ 312 (507)
....+..+.. +....+ .+...... ...........+++.++++++.+. .+|.++...++++.|+++
T Consensus 321 ~~~~~~~~~~l~~L~~L-----~L~~n~l~-------~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~ 388 (968)
T PLN00113 321 TGKIPVALTSLPRLQVL-----QLWSNKFS-------GEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF 388 (968)
T ss_pred CCcCChhHhcCCCCCEE-----ECcCCCCc-------CcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECc
Confidence 5322211110 000000 00000000 001111122357888888888776 677778888889999999
Q ss_pred CCccCc-CCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCC
Q 010567 313 RNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 391 (507)
Q Consensus 313 ~~~~~~-i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 391 (507)
+|.+.. +|..+..+++|++|++++|.+.+..+..+..+++|+.+++++|.+++..+..+..+++|+.|++++|.+.+..
T Consensus 389 ~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 468 (968)
T PLN00113 389 SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL 468 (968)
T ss_pred CCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeec
Confidence 888765 6777888999999999999988777777888999999999999998877766788999999999999887766
Q ss_pred CCCCCCCCcCcEEEcccccCc-ccccchhccCCCcEEEcCCCccc-cccccccCCCCCCeEeCCCCCCC-CCCCcccCCC
Q 010567 392 NPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNIS-ALPPELGLLE 468 (507)
Q Consensus 392 ~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~L~l~~~~l~-~l~~~~~~l~~L~~L~l~~~~l~-~~~~~~~~~~ 468 (507)
+..+ ..++|+.|++++|++. .+|..+..+++|+.|++++|.+. .+|+.+.++++|++|++++|.++ .+|..+..+
T Consensus 469 p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l- 546 (968)
T PLN00113 469 PDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM- 546 (968)
T ss_pred Cccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc-
Confidence 6544 4588999999999998 67778889999999999999988 67889999999999999999988 566666655
Q ss_pred ccCceEeccCCCCCCccHHHHhh
Q 010567 469 PSLQALRLDGNPLRSIRRTILDR 491 (507)
Q Consensus 469 ~~L~~L~l~~n~~~~~~~~~~~~ 491 (507)
++|+.|++++|++...-+..+..
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~ 569 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGN 569 (968)
T ss_pred ccCCEEECCCCcccccCChhHhc
Confidence 99999999999998554444444
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4e-42 Score=368.73 Aligned_cols=462 Identities=28% Similarity=0.372 Sum_probs=373.7
Q ss_pred ecHH-hhcccCCCCEEEcCCCccc-ccCccccCCCcccEEeCCCCCCC-CCchhhhcccCCCeEEcCCCcCc-cCCcccc
Q 010567 6 FLLY-VFDRLHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLA 81 (507)
Q Consensus 6 ~~~~-~~~~~~~L~~L~l~~~~i~-~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~~-~l~~~~~ 81 (507)
.+|. .+..+++||+|++++|.+. .+|. ..+++|++|++++|.+. .+|..+.++++|++|++++|.+. .+|..+.
T Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 185 (968)
T PLN00113 108 PIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT 185 (968)
T ss_pred cCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhh
Confidence 4554 4559999999999999887 4454 45789999999999887 67888999999999999999876 6788899
Q ss_pred CCCCCcEEEcCCCcccccchhhhcCccccceeecCCcccc-cccccccCCCcccEEeccCCccc-cCCCCCcCCCCCcEE
Q 010567 82 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN-GMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEF 159 (507)
Q Consensus 82 ~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~L 159 (507)
.+++|++|++++|.+....+..+.++++|++|++++|.+. .+|..+..+++|++|++++|.+. .+|..+.++++|+.|
T Consensus 186 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 265 (968)
T PLN00113 186 NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265 (968)
T ss_pred hCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEE
Confidence 9999999999999988655566899999999999999885 57888899999999999999887 678889999999999
Q ss_pred EcCCCCCc-cCCccccCCCCCCEEEcCCCcccc-cchhhhcc-ccCeEECCCCCCCC-CCccccCCCCccEEEccCCccc
Q 010567 160 YMGNNALS-ALPAELGKLSKLGTLDLHSNQLKE-YCVEACQL-RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 235 (507)
Q Consensus 160 ~l~~~~~~-~l~~~l~~~~~L~~L~l~~~~~~~-~~~~~~~~-~L~~l~l~~~~~~~-~~~~l~~l~~L~~L~l~~~~~~ 235 (507)
++++|.+. .+|..+..+++|++|++++|.+.. ++...... +|+.+++++|.+.+ +|..+..+++|+.|++++|.+.
T Consensus 266 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 345 (968)
T PLN00113 266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFS 345 (968)
T ss_pred ECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCc
Confidence 99999887 578888889999999999998874 44433333 39999999998876 6777888999999999998875
Q ss_pred ccccc-ccCCCCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCC-CCChhhhcCCCccEEEcCC
Q 010567 236 TLRSS-LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSR 313 (507)
Q Consensus 236 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-~~~~~~~~~~~L~~L~l~~ 313 (507)
...+. .........+. +..... .. . .........+++.++++++.+. .+|..+..+++|+.|++++
T Consensus 346 ~~~p~~l~~~~~L~~L~-----Ls~n~l---~~---~-~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~ 413 (968)
T PLN00113 346 GEIPKNLGKHNNLTVLD-----LSTNNL---TG---E-IPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQD 413 (968)
T ss_pred CcCChHHhCCCCCcEEE-----CCCCee---Ee---e-CChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcC
Confidence 32211 11000000000 000000 00 0 0111112357889999999877 7888888999999999999
Q ss_pred CccCc-CCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCC
Q 010567 314 NSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 392 (507)
Q Consensus 314 ~~~~~-i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 392 (507)
|.+.. +|..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+..+..+ ..++|+.|++++|.+.+..+
T Consensus 414 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 414 NSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVP 492 (968)
T ss_pred CEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccC
Confidence 99875 77778999999999999999998777777889999999999999886555433 56899999999999998888
Q ss_pred CCCCCCCcCcEEEcccccCc-ccccchhccCCCcEEEcCCCccc-cccccccCCCCCCeEeCCCCCCC-CCCCcccCCCc
Q 010567 393 PPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNIS-ALPPELGLLEP 469 (507)
Q Consensus 393 ~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~L~l~~~~l~-~l~~~~~~l~~L~~L~l~~~~l~-~~~~~~~~~~~ 469 (507)
..+..+++|+.|++++|.+. .+|..+..+++|+.|++++|.++ .+|..+.++++|++|++++|+++ .+|..+... +
T Consensus 493 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~ 571 (968)
T PLN00113 493 RKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV-E 571 (968)
T ss_pred hhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcC-c
Confidence 88999999999999999998 78888999999999999999998 56888999999999999999987 788777776 8
Q ss_pred cCceEeccCCCCCC
Q 010567 470 SLQALRLDGNPLRS 483 (507)
Q Consensus 470 ~L~~L~l~~n~~~~ 483 (507)
+|+.+++++|++..
T Consensus 572 ~L~~l~ls~N~l~~ 585 (968)
T PLN00113 572 SLVQVNISHNHLHG 585 (968)
T ss_pred ccCEEeccCCccee
Confidence 99999999999863
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=275.06 Aligned_cols=378 Identities=26% Similarity=0.369 Sum_probs=278.3
Q ss_pred CCEEEcCCCcccccCc-cccCC--CcccEEeCCCCCCCCC-chhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcC
Q 010567 17 LKSLDVSFNSIMKIPD-EIGSA--TALVKFDCSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 92 (507)
Q Consensus 17 L~~L~l~~~~i~~~~~-~~~~~--~~L~~L~l~~~~l~~~-~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~ 92 (507)
-+.||.++..+..+.. .+..+ +.-+.|++++|++..+ +..|.++++|+++++..|.++.||.......+|+.|++.
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLR 133 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeee
Confidence 3456666666665422 23322 2345588888888765 456778888888888888888887666666778888888
Q ss_pred CCcccccchhhhcCccccceeecCCccccccc-ccccCCCcccEEeccCCccccCC-CCCcCCCCCcEEEcCCCCCccCC
Q 010567 93 GNKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALP 170 (507)
Q Consensus 93 ~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~L~~L~l~~~~i~~l~-~~~~~~~~L~~L~l~~~~~~~l~ 170 (507)
+|.++.+....++.++.|+.++++.|.+++++ ..+..-.++++|++++|.|+++. ..|..+.+|..|.+++|.++.+|
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 88888888777888888888888888887776 34555567888888888877664 35666777777777777777775
Q ss_pred c-cccCCCCCCEEEcCCCcccccchhhhc--cccCeEECCCCCCCCCCcc-ccCCCCccEEEccCCccccccccccCCCC
Q 010567 171 A-ELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPT 246 (507)
Q Consensus 171 ~-~l~~~~~L~~L~l~~~~~~~~~~~~~~--~~L~~l~l~~~~~~~~~~~-l~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 246 (507)
. .|.++++|+.|++..|++.-.....+. .+|+.+.+.+|.+..+..+ +..+.++++|+++.|.+..
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~---------- 283 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA---------- 283 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh----------
Confidence 4 355577777777777766543322221 1255555555555553332 4455555555555554421
Q ss_pred HHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcC-CccccC
Q 010567 247 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL-PPELSS 325 (507)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i-~~~~~~ 325 (507)
.-..|++++++|+.|+++.|.+..| +..++.
T Consensus 284 ------------------------------------------------vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 284 ------------------------------------------------VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ------------------------------------------------hhcccccccchhhhhccchhhhheeecchhhh
Confidence 2235678889999999999998886 455888
Q ss_pred CCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccC---CCCCCCCCCCCcCc
Q 010567 326 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS---LPENPPFSSLPHLQ 402 (507)
Q Consensus 326 ~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~---~~~~~~~~~~~~L~ 402 (507)
+++|++|+++.|.++.+++..|..+..|++|+|++|.+..+...+|..+++|++|+++.|.+. ......|.++++|+
T Consensus 316 tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 316 TQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred cccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 999999999999999999999999999999999999999988888999999999999998654 23556678899999
Q ss_pred EEEcccccCcccccc-hhccCCCcEEEcCCCccccc-cccccCCCCCCeEeCC
Q 010567 403 ELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLS 453 (507)
Q Consensus 403 ~L~l~~~~i~~l~~~-~~~~~~L~~L~l~~~~l~~l-~~~~~~l~~L~~L~l~ 453 (507)
+|++.+|++..++.. +.++++|++|++.+|.|.++ |+.|..+ .|++|-+.
T Consensus 396 kL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 396 KLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred heeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 999999999988764 67889999999999999888 6788888 88888764
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=275.02 Aligned_cols=375 Identities=25% Similarity=0.332 Sum_probs=296.4
Q ss_pred CCeEEcCCCcCccCCc-cccC--CCCCcEEEcCCCcccccchhhhcCccccceeecCCcccccccccccCCCcccEEecc
Q 010567 63 LSDFKASNNCITSLPE-DLAD--CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 139 (507)
Q Consensus 63 L~~L~l~~~~~~~l~~-~~~~--~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~ 139 (507)
-+.|+.++..+..+.. .+.+ .+.-++|++++|++.++....|.++++|+++++..|.++.+|.......+|++|++.
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLR 133 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeee
Confidence 3556777766665421 1222 234566888888888888888889999999999998888888877777789999999
Q ss_pred CCccccCC-CCCcCCCCCcEEEcCCCCCccCCcc-ccCCCCCCEEEcCCCcccccchhhhcc--ccCeEECCCCCCCCCC
Q 010567 140 QNRILSIP-SSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLP 215 (507)
Q Consensus 140 ~~~i~~l~-~~~~~~~~L~~L~l~~~~~~~l~~~-l~~~~~L~~L~l~~~~~~~~~~~~~~~--~L~~l~l~~~~~~~~~ 215 (507)
.|.|.++. +.++.++.|+.|+++.|.++.++.. +..-.++++|++++|+|+++....+.. +|..+.+++|+++.+|
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 88888664 3577788889999998888877543 555578999999999988776654433 3888999999999987
Q ss_pred cc-ccCCCCccEEEccCCccccccccccCCCCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCC
Q 010567 216 PE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 294 (507)
Q Consensus 216 ~~-l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~ 294 (507)
.. +..+++|+.|++..|.+..+...
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~l------------------------------------------------------ 239 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGL------------------------------------------------------ 239 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhh------------------------------------------------------
Confidence 66 55699999999988877432211
Q ss_pred CCChhhhcCCCccEEEcCCCccCcCCcc-ccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCC
Q 010567 295 AIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 373 (507)
Q Consensus 295 ~~~~~~~~~~~L~~L~l~~~~~~~i~~~-~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~ 373 (507)
.+.++++|+.|.+..|++..+... |-.+.++++|++..|++.......+-.+.+|+.|+++.|.|..+..++|..
T Consensus 240 ----tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 240 ----TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ----hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh
Confidence 123356788888888888776544 677888999999999888877777778899999999999998888888999
Q ss_pred CCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccc-hhccCCCcEEEcCCCccc-cc---cccccCCCCCC
Q 010567 374 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQ-SI---PEGFKNLTSLT 448 (507)
Q Consensus 374 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~-~~~~~~L~~L~l~~~~l~-~l---~~~~~~l~~L~ 448 (507)
+++|++|++++|.++...+..|..+..|++|.|++|+|+.+.+. +..+++|++|+++.|.+. .+ ...+..+++|+
T Consensus 316 tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 316 TQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred cccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 99999999999999888888888899999999999999877654 567889999999999876 22 34578899999
Q ss_pred eEeCCCCCCCCCCCcccCCCccCceEeccCCCCCCccHHHHhhhHHH
Q 010567 449 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKA 495 (507)
Q Consensus 449 ~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~ 495 (507)
.|++.||+++.+++-.+..+++|+.|++.+|.|.+|-+.+|..+...
T Consensus 396 kL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk 442 (873)
T KOG4194|consen 396 KLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELK 442 (873)
T ss_pred heeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhh
Confidence 99999999998888777667899999999999999999999887433
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=5.6e-38 Score=275.31 Aligned_cols=440 Identities=25% Similarity=0.346 Sum_probs=289.7
Q ss_pred hhcccCCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEE
Q 010567 10 VFDRLHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 89 (507)
Q Consensus 10 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L 89 (507)
.++.-..+..+++++|.+..+...+..+..+.+++++++.+.++|++++.+..++.++.++|.+..+|..+..+.+|+++
T Consensus 40 ~wW~qv~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l 119 (565)
T KOG0472|consen 40 NWWEQVDLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKL 119 (565)
T ss_pred hhhhhcchhhhhhccCchhhccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhh
Confidence 34455667778888888777766677778888888888888888888888888888888888888888888888888888
Q ss_pred EcCCCcccccchhhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccC
Q 010567 90 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 169 (507)
Q Consensus 90 ~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l 169 (507)
++++|.+..++.+ ++.+..|+.++..+|.+..+|+.+..+.++..+++.++.++.+|+..-+++.|++|+...|.++.+
T Consensus 120 ~~s~n~~~el~~~-i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tl 198 (565)
T KOG0472|consen 120 DCSSNELKELPDS-IGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETL 198 (565)
T ss_pred hccccceeecCch-HHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcC
Confidence 8888887777766 777777777777778787777777777778888888777777776666677777777777777777
Q ss_pred CccccCCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCCCCCcccc-CCCCccEEEccCCccccccccccCCCCHH
Q 010567 170 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIG-KMTTLRKLLLTGNPLRTLRSSLVNGPTPA 248 (507)
Q Consensus 170 ~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~-~l~~L~~L~l~~~~~~~~~~~~~~~~~~~ 248 (507)
|..++.+.+|..|+++.|++..+|.......|++++++.|.+..+|.... .+.++..||+..|++++++..++-
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~cl----- 273 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICL----- 273 (565)
T ss_pred ChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHH-----
Confidence 77777777777777777777766643333336666666666666665533 566666666666655443322111
Q ss_pred HHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcC---------
Q 010567 249 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL--------- 319 (507)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i--------- 319 (507)
-.++..++++++.++.+|..++.+ .|+.|.+.+|.+..+
T Consensus 274 -------------------------------LrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT 321 (565)
T KOG0472|consen 274 -------------------------------LRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGT 321 (565)
T ss_pred -------------------------------hhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccH
Confidence 012233344444444444433333 333333333321110
Q ss_pred -----------------------------Ccc----ccCCCcCcEEecccCcccCCchHHhhcCC--CCCEEEccCCCCC
Q 010567 320 -----------------------------PPE----LSSCASLQTLILSRNKIKDWPDAILTSLS--SLSCLKLDNNPLR 364 (507)
Q Consensus 320 -----------------------------~~~----~~~~~~L~~L~l~~~~l~~~~~~~~~~~~--~L~~L~l~~~~i~ 364 (507)
+++ .....+.+.|++++-+++..+...|..-. -...++++.|++.
T Consensus 322 ~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~ 401 (565)
T KOG0472|consen 322 QEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC 401 (565)
T ss_pred HHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh
Confidence 000 01122344455555555555554443321 2445555555555
Q ss_pred CCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCC
Q 010567 365 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 444 (507)
Q Consensus 365 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l 444 (507)
++|.. +..++.+...-+..++..+..+..+..+++|..|++++|-+..+|..++.+-.|+.|+++.|.+..+|+++...
T Consensus 402 elPk~-L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~l 480 (565)
T KOG0472|consen 402 ELPKR-LVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLVRLQTLNLSFNRFRMLPECLYEL 480 (565)
T ss_pred hhhhh-hHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcchhhhhhhhhheecccccccccchHHHhhH
Confidence 55433 22232222222222233344555667788999999999988899988888888999999999998999888888
Q ss_pred CCCCeEeCCCCCCCCCCCc-ccCCCccCceEeccCCCCCCccHHHH
Q 010567 445 TSLTELDLSDNNISALPPE-LGLLEPSLQALRLDGNPLRSIRRTIL 489 (507)
Q Consensus 445 ~~L~~L~l~~~~l~~~~~~-~~~~~~~L~~L~l~~n~~~~~~~~~~ 489 (507)
..++.+-.++|+++.+++. +..+ .+|..|++.+|.+..|++..-
T Consensus 481 q~lEtllas~nqi~~vd~~~l~nm-~nL~tLDL~nNdlq~IPp~Lg 525 (565)
T KOG0472|consen 481 QTLETLLASNNQIGSVDPSGLKNM-RNLTTLDLQNNDLQQIPPILG 525 (565)
T ss_pred HHHHHHHhccccccccChHHhhhh-hhcceeccCCCchhhCChhhc
Confidence 8888888888889888887 4444 899999999999998887653
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=283.05 Aligned_cols=437 Identities=30% Similarity=0.334 Sum_probs=321.5
Q ss_pred HhhcccCCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcE
Q 010567 9 YVFDRLHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 88 (507)
Q Consensus 9 ~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~ 88 (507)
+...+.-+|+.||++++.+..+|..+..+++|+.|+++.|.+.+.|.+..++.+|++++|.+|....+|..+..+.+|+.
T Consensus 39 ~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~ 118 (1081)
T KOG0618|consen 39 EFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNLQY 118 (1081)
T ss_pred HHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccchhhcCchhHHhhhcccc
Confidence 44455556999999999998889888889999999999999999998888899999999999999999999999999999
Q ss_pred EEcCCCcccccchhhhcCccccceeecCCc-cccc-------------------ccccccCCCcccEEeccCCccccCCC
Q 010567 89 LDVEGNKLTVLSNNLIASWTMLTELIASKN-LLNG-------------------MPETIGSLSRLIRLDLHQNRILSIPS 148 (507)
Q Consensus 89 L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~-~~~~-------------------~~~~~~~~~~L~~L~l~~~~i~~l~~ 148 (507)
|++++|.+..++.- +..+..+..+..++| .+.. ++..+..+.+ .+++++|.+. ..
T Consensus 119 LdlS~N~f~~~Pl~-i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~--~~ 193 (1081)
T KOG0618|consen 119 LDLSFNHFGPIPLV-IEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME--VL 193 (1081)
T ss_pred cccchhccCCCchh-HHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh--hh
Confidence 99999988877765 666666666666665 1111 1112222222 3666666555 22
Q ss_pred CCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCCCCCccccCCCCccEEE
Q 010567 149 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 228 (507)
Q Consensus 149 ~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~ 228 (507)
.+.++.+|+.|....+.+..+. -..++++.|..+.|.+........+..+++++++.++++.+|.|+..+.+|..++
T Consensus 194 dls~~~~l~~l~c~rn~ls~l~---~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 194 DLSNLANLEVLHCERNQLSELE---ISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEWIGACANLEALN 270 (1081)
T ss_pred hhhhccchhhhhhhhcccceEE---ecCcchheeeeccCcceeeccccccccceeeecchhhhhcchHHHHhcccceEec
Confidence 3455566666666665555331 1235778888888877755444445559999999999999999999999999999
Q ss_pred ccCCccccccccccCCCCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccE
Q 010567 229 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 308 (507)
Q Consensus 229 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~ 308 (507)
...|.+..++...+. ..+++.+....|.+..+|......+.|++
T Consensus 271 ~n~N~l~~lp~ri~~------------------------------------~~~L~~l~~~~nel~yip~~le~~~sL~t 314 (1081)
T KOG0618|consen 271 ANHNRLVALPLRISR------------------------------------ITSLVSLSAAYNELEYIPPFLEGLKSLRT 314 (1081)
T ss_pred ccchhHHhhHHHHhh------------------------------------hhhHHHHHhhhhhhhhCCCcccccceeee
Confidence 999987554432221 12344555556666677777777778888
Q ss_pred EEcCCCccCcCCcccc-CCC-cCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcc
Q 010567 309 LDLSRNSIQELPPELS-SCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 386 (507)
Q Consensus 309 L~l~~~~~~~i~~~~~-~~~-~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~ 386 (507)
|++..|.+.++|..+- ... +++.|+.+.+.+...+...-..++.|+.|.+.+|.++..-...+.+.++|+.|++++|.
T Consensus 315 LdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 315 LDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred eeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 8888888777776432 222 25666666666655543222345677888888888876554557788889999999888
Q ss_pred cCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCCCCCCeEeCCCCCCC--CCCCcc
Q 010567 387 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS--ALPPEL 464 (507)
Q Consensus 387 ~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~--~~~~~~ 464 (507)
+.......+.+++.|+.|+|++|+++.+|..+..+..|++|..++|.+...| .+.+++.|+.+|++.|.++ .+++..
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhC
Confidence 8877777788889999999999999999988999999999999999999998 6788999999999999887 455544
Q ss_pred cCCCccCceEeccCCCCCCccHHHHhhh
Q 010567 465 GLLEPSLQALRLDGNPLRSIRRTILDRG 492 (507)
Q Consensus 465 ~~~~~~L~~L~l~~n~~~~~~~~~~~~~ 492 (507)
.. ++|++|+++||.-...+...|...
T Consensus 474 p~--p~LkyLdlSGN~~l~~d~~~l~~l 499 (1081)
T KOG0618|consen 474 PS--PNLKYLDLSGNTRLVFDHKTLKVL 499 (1081)
T ss_pred CC--cccceeeccCCcccccchhhhHHh
Confidence 33 899999999998766666665553
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.2e-35 Score=271.27 Aligned_cols=362 Identities=27% Similarity=0.437 Sum_probs=220.2
Q ss_pred CCcccEEeCCCCCCC--CCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceee
Q 010567 37 ATALVKFDCSSNQLK--ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 114 (507)
Q Consensus 37 ~~~L~~L~l~~~~l~--~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~ 114 (507)
++-.+-.++++|.++ .+|.....+++++-|.+....+..+|+.++.+.+|++|.+++|++..+... +..++.||.+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vhGE-Ls~Lp~LRsv~ 84 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVHGE-LSDLPRLRSVI 84 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhhhh-hccchhhHHHh
Confidence 344455566666655 556666666666666666666666666666666666666666666655444 55666666666
Q ss_pred cCCccc--ccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcCCCccccc
Q 010567 115 ASKNLL--NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 192 (507)
Q Consensus 115 l~~~~~--~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~ 192 (507)
+..|.+ +.+|..+..+..|+.||++.|+++..|..+.+.+++-.|++++|.|..+|
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIP---------------------- 142 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIP---------------------- 142 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCC----------------------
Confidence 666555 23555555566666666666665555555555555555555555555544
Q ss_pred chhhhcc--ccCeEECCCCCCCCCCccccCCCCccEEEccCCccccccccccCCCCHHHHHHHHhcCCCCCccccccchh
Q 010567 193 CVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 270 (507)
Q Consensus 193 ~~~~~~~--~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (507)
...+-. -|-.||+++|++..+|+.+..+.+|++|.+++|++....
T Consensus 143 -n~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQ-------------------------------- 189 (1255)
T KOG0444|consen 143 -NSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQ-------------------------------- 189 (1255)
T ss_pred -chHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHH--------------------------------
Confidence 433221 156777888888888888888888999999888763211
Q ss_pred hhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCc--cCcCCccccCCCcCcEEecccCcccCCchHHhh
Q 010567 271 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--IQELPPELSSCASLQTLILSRNKIKDWPDAILT 348 (507)
Q Consensus 271 ~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~--~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~ 348 (507)
+..+| .+++|+.|++++++ +..+|.++..+.+|..+++++|.+...+.. +.
T Consensus 190 ----------------------LrQLP----smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPec-ly 242 (1255)
T KOG0444|consen 190 ----------------------LRQLP----SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPEC-LY 242 (1255)
T ss_pred ----------------------HhcCc----cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHH-Hh
Confidence 01111 23455555555554 334666666666666666666666555443 34
Q ss_pred cCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCc--ccccchhccCCCcE
Q 010567 349 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR--EAPTDILRLQQLRI 426 (507)
Q Consensus 349 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~--~l~~~~~~~~~L~~ 426 (507)
.+++|+.|++++|.++++... ...+.+|+.|+++.|.++. .|.++..+++|+.|++.+|+++ ++|..++++.+|+.
T Consensus 243 ~l~~LrrLNLS~N~iteL~~~-~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Lev 320 (1255)
T KOG0444|consen 243 KLRNLRRLNLSGNKITELNMT-EGEWENLETLNLSRNQLTV-LPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEV 320 (1255)
T ss_pred hhhhhheeccCcCceeeeecc-HHHHhhhhhhccccchhcc-chHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHH
Confidence 566666666666666655432 4445566666666665543 2445556666666666666554 66666777777777
Q ss_pred EEcCCCccccccccccCCCCCCeEeCCCCCCCCCCCcccCCCccCceEeccCCCCCCc
Q 010567 427 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 484 (507)
Q Consensus 427 L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~~~~~ 484 (507)
+...+|.++-+|++++.|..|+.|.+++|++.++|+.+..+ +.|+.|++..|+--.+
T Consensus 321 f~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL-~~l~vLDlreNpnLVM 377 (1255)
T KOG0444|consen 321 FHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLPEAIHLL-PDLKVLDLRENPNLVM 377 (1255)
T ss_pred HHhhccccccCchhhhhhHHHHHhcccccceeechhhhhhc-CCcceeeccCCcCccC
Confidence 77777766666777777777777777777666666665554 6677777766664433
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.6e-34 Score=266.05 Aligned_cols=364 Identities=26% Similarity=0.368 Sum_probs=267.7
Q ss_pred cccCCCCEEEcCCCccc--ccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEE
Q 010567 12 DRLHMLKSLDVSFNSIM--KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 89 (507)
Q Consensus 12 ~~~~~L~~L~l~~~~i~--~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L 89 (507)
+-++..|..|+++|.+. .+|.....+++++.|.+...++..+|+.++.+.+|++|.+++|++..+-..++.++.|+.+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSV 83 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHH
Confidence 45688899999999987 6799999999999999999999999999999999999999999999888888999999999
Q ss_pred EcCCCccc--ccchhhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCC-CcCCCCCcEEEcCCCCC
Q 010567 90 DVEGNKLT--VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNAL 166 (507)
Q Consensus 90 ~l~~~~l~--~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~-~~~~~~L~~L~l~~~~~ 166 (507)
.+.+|++. .|+.+ +-.+.-|..|++++|.+.++|..+..-+++-.|++++|+|.++|.. +.+++.|-.|++++|.+
T Consensus 84 ~~R~N~LKnsGiP~d-iF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTD-IFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCch-hcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 99999887 57776 7789999999999999999999999999999999999999999975 67899999999999999
Q ss_pred ccCCccccCCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCCCCCccccCCCCccEEEccCCccccccccccCCCC
Q 010567 167 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 246 (507)
Q Consensus 167 ~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 246 (507)
..+|..+..+.+|++|.+++|.+....-. .+..+++|+.|.+++.+-
T Consensus 163 e~LPPQ~RRL~~LqtL~Ls~NPL~hfQLr---------------------QLPsmtsL~vLhms~TqR------------ 209 (1255)
T KOG0444|consen 163 EMLPPQIRRLSMLQTLKLSNNPLNHFQLR---------------------QLPSMTSLSVLHMSNTQR------------ 209 (1255)
T ss_pred hhcCHHHHHHhhhhhhhcCCChhhHHHHh---------------------cCccchhhhhhhcccccc------------
Confidence 99999999999999999999876532111 122334444444444321
Q ss_pred HHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcCCccccCC
Q 010567 247 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 326 (507)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i~~~~~~~ 326 (507)
.+..+|..+-.+.+|..++++.|.+..+|..+-.+
T Consensus 210 ---------------------------------------------Tl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l 244 (1255)
T KOG0444|consen 210 ---------------------------------------------TLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKL 244 (1255)
T ss_pred ---------------------------------------------hhhcCCCchhhhhhhhhccccccCCCcchHHHhhh
Confidence 11234444444455555555555555555555555
Q ss_pred CcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCC-CCCCCCCCCcCcEEE
Q 010567 327 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP-ENPPFSSLPHLQELY 405 (507)
Q Consensus 327 ~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~ 405 (507)
++|+.|++++|.++.+.... +...+|++|+++.|+++.+|.. +..+++|+.|.+.+|.++-. .|..++.+..|+.+.
T Consensus 245 ~~LrrLNLS~N~iteL~~~~-~~W~~lEtLNlSrNQLt~LP~a-vcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~ 322 (1255)
T KOG0444|consen 245 RNLRRLNLSGNKITELNMTE-GEWENLETLNLSRNQLTVLPDA-VCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFH 322 (1255)
T ss_pred hhhheeccCcCceeeeeccH-HHHhhhhhhccccchhccchHH-HhhhHHHHHHHhccCcccccCCccchhhhhhhHHHH
Confidence 55555555555555543322 3345556666666666555533 55566666666666555432 344556666666666
Q ss_pred cccccCcccccchhccCCCcEEEcCCCccccccccccCCCCCCeEeCCCCC
Q 010567 406 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 456 (507)
Q Consensus 406 l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~ 456 (507)
..+|.+.-+|+.+..|.+|+.|.+..|.+.++|+++.-++.|+.||+..|.
T Consensus 323 aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 323 AANNKLELVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hhccccccCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCc
Confidence 666666666777777777777777777777777776667777777777664
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-32 Score=262.85 Aligned_cols=452 Identities=27% Similarity=0.344 Sum_probs=307.8
Q ss_pred ecHHhhcccCCCCEEEcCCCcccccCcc-ccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCC
Q 010567 6 FLLYVFDRLHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 84 (507)
Q Consensus 6 ~~~~~~~~~~~L~~L~l~~~~i~~~~~~-~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~ 84 (507)
-+|..+..-..+..|+++.|.+-..|-. ...+.+|+.|++++|.+..+|..+..+.+|+.|+++.|.+...|.....+.
T Consensus 12 ~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~ 91 (1081)
T KOG0618|consen 12 LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMR 91 (1081)
T ss_pred ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHhhCchhhhhhh
Confidence 3555565556677788887766554433 335666999999999998888888888899999999998888888888889
Q ss_pred CCcEEEcCCCcccccchhhhcCccccceeecCCcccccccccccCCCcccEEeccCC-ccccCCCCCcCCCCCcEEEcCC
Q 010567 85 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYMGN 163 (507)
Q Consensus 85 ~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~-~i~~l~~~~~~~~~L~~L~l~~ 163 (507)
+|+.+.|.+|.+...+.. +..+++|+.|+++.|.+..+|..+..+..+..+..++| .+..++... ++.+++..
T Consensus 92 ~l~~lnL~~n~l~~lP~~-~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~-----ik~~~l~~ 165 (1081)
T KOG0618|consen 92 NLQYLNLKNNRLQSLPAS-ISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTS-----IKKLDLRL 165 (1081)
T ss_pred cchhheeccchhhcCchh-HHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhcccc-----chhhhhhh
Confidence 999999998888887766 88889999999999988888887777777777777777 222222111 33344443
Q ss_pred CCCc-cCCccccCCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCCCCCccccCCCCccEEEccCCcccccccccc
Q 010567 164 NALS-ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 242 (507)
Q Consensus 164 ~~~~-~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 242 (507)
+.+. .++..+..+.+ .+++..|.+. .........++.+....+++..+- ..-++++.|+...|.++.+.....
T Consensus 166 n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~dls~~~~l~~l~c~rn~ls~l~---~~g~~l~~L~a~~n~l~~~~~~p~ 239 (1081)
T KOG0618|consen 166 NVLGGSFLIDIYNLTH--QLDLRYNEME-VLDLSNLANLEVLHCERNQLSELE---ISGPSLTALYADHNPLTTLDVHPV 239 (1081)
T ss_pred hhcccchhcchhhhhe--eeecccchhh-hhhhhhccchhhhhhhhcccceEE---ecCcchheeeeccCcceeeccccc
Confidence 3332 22222222222 3555555444 111111222444444444333210 112334444444444332111110
Q ss_pred CCCCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcCCcc
Q 010567 243 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 322 (507)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i~~~ 322 (507)
. ..+..... ...... . .......+.+++.+....+.+..+|..+...++|+.|.+..|++..+|+.
T Consensus 240 p----~nl~~~di-----s~n~l~----~-lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~ 305 (1081)
T KOG0618|consen 240 P----LNLQYLDI-----SHNNLS----N-LPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPF 305 (1081)
T ss_pred c----ccceeeec-----chhhhh----c-chHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCc
Confidence 0 00000000 000000 0 00111113456666667777777777777777777777777777777777
Q ss_pred ccCCCcCcEEecccCcccCCchHHhhcCCC-CCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcC
Q 010567 323 LSSCASLQTLILSRNKIKDWPDAILTSLSS-LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 401 (507)
Q Consensus 323 ~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~-L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 401 (507)
..+...|++|++..|++...+...+..... ++.++.+.+.+...+...=...+.|+.|.+.+|.+++.....+.++++|
T Consensus 306 le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL 385 (1081)
T KOG0618|consen 306 LEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL 385 (1081)
T ss_pred ccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccce
Confidence 777888888888888888877766655544 7777777777777765444567889999999999999888889999999
Q ss_pred cEEEcccccCcccccc-hhccCCCcEEEcCCCccccccccccCCCCCCeEeCCCCCCCCCCCcccCCCccCceEeccCCC
Q 010567 402 QELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 480 (507)
Q Consensus 402 ~~L~l~~~~i~~l~~~-~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~ 480 (507)
|.|+|++|++..+|+. +.++..|+.|++++|+++.||+.+.+++.|+.|...+|++..+| .+... +.|+.++++.|.
T Consensus 386 KVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l-~qL~~lDlS~N~ 463 (1081)
T KOG0618|consen 386 KVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQL-PQLKVLDLSCNN 463 (1081)
T ss_pred eeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhc-CcceEEecccch
Confidence 9999999999999987 67899999999999999999999999999999999999999999 56666 999999999999
Q ss_pred CCCcc
Q 010567 481 LRSIR 485 (507)
Q Consensus 481 ~~~~~ 485 (507)
++++.
T Consensus 464 L~~~~ 468 (1081)
T KOG0618|consen 464 LSEVT 468 (1081)
T ss_pred hhhhh
Confidence 97664
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=1.1e-23 Score=226.67 Aligned_cols=338 Identities=22% Similarity=0.318 Sum_probs=174.2
Q ss_pred HHhhcccCCCCEEEcCCCcc------c-ccCccccCCC-cccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCcc
Q 010567 8 LYVFDRLHMLKSLDVSFNSI------M-KIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 79 (507)
Q Consensus 8 ~~~~~~~~~L~~L~l~~~~i------~-~~~~~~~~~~-~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~ 79 (507)
..+|..|++|+.|.+..+.. . .+|..+..++ +|+.|.+.++.++.+|..+ ...+|++|+++++.+..+|..
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~ 629 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDG 629 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccc
Confidence 34566666666666654321 1 3455554443 4666666666666666554 345666666666666666666
Q ss_pred ccCCCCCcEEEcCCCc-ccccchhhhcCccccceeecCCcc-cccccccccCCCcccEEeccCCccccCCCCCcCCCCCc
Q 010567 80 LADCSKMSKLDVEGNK-LTVLSNNLIASWTMLTELIASKNL-LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 157 (507)
Q Consensus 80 ~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~ 157 (507)
+..+++|+.|+++++. +..++. +..+++|+.|++.+|. +..+|..+..+++|+.|++++|.
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~--------------- 692 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCE--------------- 692 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCC---------------
Confidence 6666666666666543 333432 4455555555555443 23444445555555555555442
Q ss_pred EEEcCCCCCccCCccccCCCCCCEEEcCCCcc-cccchhhhccccCeEECCCCCCCCCCccccCCCCccEEEccCCcccc
Q 010567 158 EFYMGNNALSALPAELGKLSKLGTLDLHSNQL-KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 236 (507)
Q Consensus 158 ~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~-~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 236 (507)
.++.+|..+ .+++|+.|++++|.. ..++.. ..+|++|+++++.+..+|..+ .+++|+.|.+.++....
T Consensus 693 -------~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 693 -------NLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred -------CcCccCCcC-CCCCCCEEeCCCCCCccccccc--cCCcCeeecCCCccccccccc-cccccccccccccchhh
Confidence 233343332 344555555555432 122211 123666667766666666543 45677777665543211
Q ss_pred ccccccCCCCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCCCCCCC-hhhhcCCCccEEEcCCCc
Q 010567 237 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP-SEIWEAGEITKLDLSRNS 315 (507)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-~~~~~~~~L~~L~l~~~~ 315 (507)
+.. ....++ ......++|+.|++++|.
T Consensus 762 l~~----------------------------------------------------~~~~l~~~~~~~~~sL~~L~Ls~n~ 789 (1153)
T PLN03210 762 LWE----------------------------------------------------RVQPLTPLMTMLSPSLTRLFLSDIP 789 (1153)
T ss_pred ccc----------------------------------------------------cccccchhhhhccccchheeCCCCC
Confidence 000 000000 011123567777777664
Q ss_pred -cCcCCccccCCCcCcEEecccCc-ccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCC
Q 010567 316 -IQELPPELSSCASLQTLILSRNK-IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 393 (507)
Q Consensus 316 -~~~i~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 393 (507)
+..+|..+..+++|+.|++++|. +..++... .+++|+.|++++|. .....+
T Consensus 790 ~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~------------------------~L~~~p- 842 (1153)
T PLN03210 790 SLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NLESLESLDLSGCS------------------------RLRTFP- 842 (1153)
T ss_pred CccccChhhhCCCCCCEEECCCCCCcCeeCCCC--CccccCEEECCCCC------------------------cccccc-
Confidence 44466666667777777776653 33332221 34555555555542 111111
Q ss_pred CCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCC-ccccccccccCCCCCCeEeCCCC
Q 010567 394 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-SLQSIPEGFKNLTSLTELDLSDN 455 (507)
Q Consensus 394 ~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~-~l~~l~~~~~~l~~L~~L~l~~~ 455 (507)
...++|+.|++++|.+..+|..+..+++|+.|++++| .++.+|..+..+++|+.+++++|
T Consensus 843 --~~~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 843 --DISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred --ccccccCEeECCCCCCccChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 1124555666666666666666666666666666664 35555555556666666666666
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.6e-23 Score=223.65 Aligned_cols=302 Identities=23% Similarity=0.309 Sum_probs=191.5
Q ss_pred ccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCC-CccCCccccCCCCCCEEEcCCC
Q 010567 109 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELGKLSKLGTLDLHSN 187 (507)
Q Consensus 109 ~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~-~~~l~~~l~~~~~L~~L~l~~~ 187 (507)
+|+.|.+.++.+..+|..+ ...+|+.|+++++.+..++..+..+++|+.|+++++. ++.+|. +..+++|+.|++++|
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c 667 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDC 667 (1153)
T ss_pred ccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCC
Confidence 4666666666666665544 3456666666666666666556666666666666553 344443 555566666666655
Q ss_pred c-ccccchhhhccc-cCeEECCCC-CCCCCCccccCCCCccEEEccCCccccccccccCCCCHHHHHHHHhcCCCCCccc
Q 010567 188 Q-LKEYCVEACQLR-LSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 264 (507)
Q Consensus 188 ~-~~~~~~~~~~~~-L~~l~l~~~-~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (507)
. +..++....... |+.|++++| .+..+|..+ .+++|+.|++++|...
T Consensus 668 ~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L----------------------------- 717 (1153)
T PLN03210 668 SSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRL----------------------------- 717 (1153)
T ss_pred CCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCc-----------------------------
Confidence 3 333433332222 555555554 334454433 5666777777665321
Q ss_pred cccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcc-----
Q 010567 265 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI----- 339 (507)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l----- 339 (507)
..+|. ..++|++|+++++.+..+|..+ .+++|++|.+.++..
T Consensus 718 -----------------------------~~~p~---~~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l~~ 764 (1153)
T PLN03210 718 -----------------------------KSFPD---ISTNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKLWE 764 (1153)
T ss_pred -----------------------------ccccc---ccCCcCeeecCCCccccccccc-cccccccccccccchhhccc
Confidence 11111 1234556666666655555433 345556555554321
Q ss_pred --cCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccc-cCccccc
Q 010567 340 --KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM-QLREAPT 416 (507)
Q Consensus 340 --~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~-~i~~l~~ 416 (507)
....+..+..+++|+.|++++|......+..++++++|+.|++++|......|..+ .+++|+.|++++| .+..+|.
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~ 843 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD 843 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc
Confidence 11222223345789999999886444333448889999999999885444444444 6899999999998 4455554
Q ss_pred chhccCCCcEEEcCCCccccccccccCCCCCCeEeCCCC-CCCCCCCcccCCCccCceEeccCCC
Q 010567 417 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNP 480 (507)
Q Consensus 417 ~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~-~l~~~~~~~~~~~~~L~~L~l~~n~ 480 (507)
. .++|+.|++++|.++.+|..+..+++|++|++++| +++.++.....+ ++|+.+++++|+
T Consensus 844 ~---~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L-~~L~~L~l~~C~ 904 (1153)
T PLN03210 844 I---STNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKL-KHLETVDFSDCG 904 (1153)
T ss_pred c---ccccCEeECCCCCCccChHHHhcCCCCCEEECCCCCCcCccCcccccc-cCCCeeecCCCc
Confidence 3 36899999999999999999999999999999998 488888877776 999999999995
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=3.7e-21 Score=192.32 Aligned_cols=256 Identities=28% Similarity=0.327 Sum_probs=124.8
Q ss_pred ccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCC
Q 010567 133 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 212 (507)
Q Consensus 133 L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~ 212 (507)
-..|+++.+.++.+|..+. .+|+.|++.+|.++.+|.. .++|++|++++|+++.++.. ...|+.|++++|.+.
T Consensus 203 ~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsLP~l--p~sL~~L~Ls~N~L~ 275 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSLPVL--PPGLLELSIFSNPLT 275 (788)
T ss_pred CcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcccCc--ccccceeeccCCchh
Confidence 3445555555555554443 2455555555555555432 24555555555555544421 123555555555554
Q ss_pred CCCccccCCCCccEEEccCCccccccccccCCCCHHHHHHHHhcCCCCCccccccchhhhhhhhhccccccceEEecCCC
Q 010567 213 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 292 (507)
Q Consensus 213 ~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~ 292 (507)
.+|... .+|+.|++++|.++.++.. ..+++.|++++|.
T Consensus 276 ~Lp~lp---~~L~~L~Ls~N~Lt~LP~~---------------------------------------p~~L~~LdLS~N~ 313 (788)
T PRK15387 276 HLPALP---SGLCKLWIFGNQLTSLPVL---------------------------------------PPGLQELSVSDNQ 313 (788)
T ss_pred hhhhch---hhcCEEECcCCcccccccc---------------------------------------ccccceeECCCCc
Confidence 444321 3344555555544322110 0123344444444
Q ss_pred CCCCChhhhcCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccC
Q 010567 293 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 372 (507)
Q Consensus 293 ~~~~~~~~~~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~ 372 (507)
+..+|.. ..+|+.|++++|.+..+|.. ..+|++|++++|.++.++.. ..+|+.|++++|.+..++..
T Consensus 314 L~~Lp~l---p~~L~~L~Ls~N~L~~LP~l---p~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~l--- 380 (788)
T PRK15387 314 LASLPAL---PSELCKLWAYNNQLTSLPTL---PSGLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPAL--- 380 (788)
T ss_pred cccCCCC---cccccccccccCcccccccc---ccccceEecCCCccCCCCCC----CcccceehhhccccccCccc---
Confidence 4433321 12455556666666555531 23566666666666554431 24555666666665554431
Q ss_pred CCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCCCCCCeEeC
Q 010567 373 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 452 (507)
Q Consensus 373 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l 452 (507)
..+|+.|++++|.+..... ..++|+.|++++|.++.+|... .+|+.|++++|+++.+|+.+.++++|+.|++
T Consensus 381 -~~~L~~LdLs~N~Lt~LP~----l~s~L~~LdLS~N~LssIP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdL 452 (788)
T PRK15387 381 -PSGLKELIVSGNRLTSLPV----LPSELKELMVSGNRLTSLPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNL 452 (788)
T ss_pred -ccccceEEecCCcccCCCC----cccCCCEEEccCCcCCCCCcch---hhhhhhhhccCcccccChHHhhccCCCeEEC
Confidence 2345566666555543221 1245556666666655555322 3455556666666666655555666666666
Q ss_pred CCCCCC
Q 010567 453 SDNNIS 458 (507)
Q Consensus 453 ~~~~l~ 458 (507)
++|+++
T Consensus 453 s~N~Ls 458 (788)
T PRK15387 453 EGNPLS 458 (788)
T ss_pred CCCCCC
Confidence 666554
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-23 Score=185.24 Aligned_cols=192 Identities=27% Similarity=0.369 Sum_probs=127.8
Q ss_pred hhcCCCccEEEcCCCccCcCC-ccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCce
Q 010567 300 IWEAGEITKLDLSRNSIQELP-PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 378 (507)
Q Consensus 300 ~~~~~~L~~L~l~~~~~~~i~-~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~ 378 (507)
+..+++|++|++++|.++.+. .+|.+...+++|.+..|++..+....|..+..|+.|++++|+|+.+.+.+|.....|.
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~ 349 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLS 349 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceee
Confidence 345677888888888877763 3477788888888888888777777788888888888888888887777788888888
Q ss_pred EEEccCcccCC----------------CCCCCCCCCCcCcEEEcccccCc----ccccch---------hccCCCcEEE-
Q 010567 379 ILDLSYNIASL----------------PENPPFSSLPHLQELYLRRMQLR----EAPTDI---------LRLQQLRILD- 428 (507)
Q Consensus 379 ~L~l~~~~~~~----------------~~~~~~~~~~~L~~L~l~~~~i~----~l~~~~---------~~~~~L~~L~- 428 (507)
.|.+-.|.+.- .+.......-.++.+.+++..+. +.|+.. ..++-+.+..
T Consensus 350 ~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvR 429 (498)
T KOG4237|consen 350 TLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVR 429 (498)
T ss_pred eeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHh
Confidence 88776652211 11112233446667777776544 222211 1223333322
Q ss_pred cCCCccccccccccCCCCCCeEeCCCCCCCCCCCcccCCCccCceEeccCCCCCCccHHHHhhhHHHHH
Q 010567 429 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 497 (507)
Q Consensus 429 l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~~ 497 (507)
.++..++.+|..+- ..-.++++.+|.++.+|+. .. .+| .+++++|+|..++...|.+++...+
T Consensus 430 cSnk~lk~lp~~iP--~d~telyl~gn~~~~vp~~--~~-~~l-~~dls~n~i~~Lsn~tf~n~tql~t 492 (498)
T KOG4237|consen 430 CSNKLLKLLPRGIP--VDVTELYLDGNAITSVPDE--LL-RSL-LLDLSNNRISSLSNYTFSNMTQLST 492 (498)
T ss_pred hcccchhhcCCCCC--chhHHHhcccchhcccCHH--HH-hhh-hcccccCceehhhcccccchhhhhe
Confidence 22334555665442 2467788999999988887 23 678 8999999999999888888876543
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=6e-21 Score=190.83 Aligned_cols=195 Identities=28% Similarity=0.327 Sum_probs=129.7
Q ss_pred CCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCC
Q 010567 15 HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 94 (507)
Q Consensus 15 ~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~ 94 (507)
..-..|+++.+.++.+|..+. ++|+.|.+++|+++.+|.. .++|++|++++|.++.+|.. .++|+.|++++|
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsLP~l---p~sL~~L~Ls~N 272 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSLPVL---PPGLLELSIFSN 272 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcccCc---ccccceeeccCC
Confidence 345677888888777777653 4678888888888877753 35788888888887777643 357778888887
Q ss_pred cccccchhhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCcccc
Q 010567 95 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 174 (507)
Q Consensus 95 ~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~ 174 (507)
.+..++. ....|+.|++.+|.+..+|.. .++|+.|++++|.+..+|... .+|+.|++++|.++.+|..
T Consensus 273 ~L~~Lp~----lp~~L~~L~Ls~N~Lt~LP~~---p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~L~~LP~l-- 340 (788)
T PRK15387 273 PLTHLPA----LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLASLPALP---SELCKLWAYNNQLTSLPTL-- 340 (788)
T ss_pred chhhhhh----chhhcCEEECcCCcccccccc---ccccceeECCCCccccCCCCc---ccccccccccCcccccccc--
Confidence 7776654 224577777777777777652 356777777777777665432 3466677777777766642
Q ss_pred CCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCCCCCccccCCCCccEEEccCCccc
Q 010567 175 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 235 (507)
Q Consensus 175 ~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 235 (507)
..+|+.|++++|++..+|.. ...|+.|++++|.+..+|... .+|+.|++++|.++
T Consensus 341 -p~~Lq~LdLS~N~Ls~LP~l--p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt 395 (788)
T PRK15387 341 -PSGLQELSVSDNQLASLPTL--PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLT 395 (788)
T ss_pred -ccccceEecCCCccCCCCCC--CcccceehhhccccccCcccc---cccceEEecCCccc
Confidence 14677777777777766542 234666777777766665432 35666666666654
No 16
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.82 E-value=5.1e-22 Score=175.05 Aligned_cols=377 Identities=23% Similarity=0.274 Sum_probs=254.3
Q ss_pred cEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCc-cccCCCCCcEEEcCCCcccccchhhhcCccccceeecCC-c
Q 010567 41 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE-DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK-N 118 (507)
Q Consensus 41 ~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~-~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~-~ 118 (507)
...++++.+++++|..+. +.-.++.+..|.|+.||. .|+.+++|+.|+|+.|.|+.|.+.+|++++.|-.|-+-+ |
T Consensus 49 ~~VdCr~~GL~eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred ceEEccCCCcccCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 346677778888887666 367888888999998875 588899999999999999999999999998887776655 8
Q ss_pred cccccc-ccccCCCcccEEeccCCccccCC-CCCcCCCCCcEEEcCCCCCccCCc-cccCCCCCCEEEcCCCccccc---
Q 010567 119 LLNGMP-ETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEY--- 192 (507)
Q Consensus 119 ~~~~~~-~~~~~~~~L~~L~l~~~~i~~l~-~~~~~~~~L~~L~l~~~~~~~l~~-~l~~~~~L~~L~l~~~~~~~~--- 192 (507)
+|+.+| ..|+.+..++.|.+.-|.+..++ ..+..++++..|.+.+|.+..++. .+..+..++.+.+..+.+...
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 888888 56888888888888888777443 457777888888888887777765 566777777777666653321
Q ss_pred chhhhccccCeEECCCCCCCCCCccccCCCCccEEEccCCccccccccccCCCCHHHHHHHHhcCCCCCccccccchhhh
Q 010567 193 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 272 (507)
Q Consensus 193 ~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (507)
++..... ...+..++......-..+.+..+.++++..+.
T Consensus 207 ~wla~~~------------a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~----------------------------- 245 (498)
T KOG4237|consen 207 PWLADDL------------AMNPIETSGARCVSPYRLYYKRINQEDARKFL----------------------------- 245 (498)
T ss_pred chhhhHH------------hhchhhcccceecchHHHHHHHhcccchhhhh-----------------------------
Confidence 1110000 00111122222222222222222111110000
Q ss_pred hhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCc-CCc-cccCCCcCcEEecccCcccCCchHHhhcC
Q 010567 273 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LPP-ELSSCASLQTLILSRNKIKDWPDAILTSL 350 (507)
Q Consensus 273 ~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-i~~-~~~~~~~L~~L~l~~~~l~~~~~~~~~~~ 350 (507)
+....++... -+.+.... -|. .|..+++|+.|++++|.++.+....|...
T Consensus 246 ------------------c~~esl~s~~----------~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~ 297 (498)
T KOG4237|consen 246 ------------------CSLESLPSRL----------SSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGA 297 (498)
T ss_pred ------------------hhHHhHHHhh----------ccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcch
Confidence 0000111100 01121111 222 27899999999999999999999999999
Q ss_pred CCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCc---cc---ccchh-----
Q 010567 351 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR---EA---PTDIL----- 419 (507)
Q Consensus 351 ~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~---~l---~~~~~----- 419 (507)
..+++|.+..|++..+....|.++..|+.|++++|.++...+.+|....+|.+|.+-.|.+. .+ .+++.
T Consensus 298 a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~ 377 (498)
T KOG4237|consen 298 AELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVV 377 (498)
T ss_pred hhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCC
Confidence 99999999999999999889999999999999999999999999999999999999888654 11 11111
Q ss_pred ------ccCCCcEEEcCCCccccc----cc---------cccCCCCCCeEeCC-CCCCCCCCCcccCCCccCceEeccCC
Q 010567 420 ------RLQQLRILDLSQNSLQSI----PE---------GFKNLTSLTELDLS-DNNISALPPELGLLEPSLQALRLDGN 479 (507)
Q Consensus 420 ------~~~~L~~L~l~~~~l~~l----~~---------~~~~l~~L~~L~l~-~~~l~~~~~~~~~~~~~L~~L~l~~n 479 (507)
+-..++.+.+++..+... |+ +=..|+.+..+.=. +..++.+|+.+. ..-.++++.+|
T Consensus 378 ~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP---~d~telyl~gn 454 (498)
T KOG4237|consen 378 GNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIP---VDVTELYLDGN 454 (498)
T ss_pred CCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCC---chhHHHhcccc
Confidence 123566777777644311 21 22345666655433 335678888765 45889999999
Q ss_pred CCCCccHHHHhh
Q 010567 480 PLRSIRRTILDR 491 (507)
Q Consensus 480 ~~~~~~~~~~~~ 491 (507)
.+..++...+..
T Consensus 455 ~~~~vp~~~~~~ 466 (498)
T KOG4237|consen 455 AITSVPDELLRS 466 (498)
T ss_pred hhcccCHHHHhh
Confidence 999999985443
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=3.1e-19 Score=179.83 Aligned_cols=179 Identities=26% Similarity=0.391 Sum_probs=85.1
Q ss_pred CCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcc
Q 010567 17 LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 96 (507)
Q Consensus 17 L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l 96 (507)
.+.|++++..++.+|..+ .++|+.|++++|+++++|..+. .+|++|++++|.++.+|..+. .+|+.|++++|.+
T Consensus 180 ~~~L~L~~~~LtsLP~~I--p~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~L 253 (754)
T PRK15370 180 KTELRLKILGLTTIPACI--PEQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLP--DTIQEMELSINRI 253 (754)
T ss_pred ceEEEeCCCCcCcCCccc--ccCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhhh--ccccEEECcCCcc
Confidence 455555555555555433 1345555555555555554433 355555555555555554332 2455555555555
Q ss_pred cccchhhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCC
Q 010567 97 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 176 (507)
Q Consensus 97 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~ 176 (507)
..++.... .+|+.|++++|.+..+|..+. .+|+.|++++|.++.+| ..+.
T Consensus 254 ~~LP~~l~---s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP-----------------------~~lp-- 303 (754)
T PRK15370 254 TELPERLP---SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLP-----------------------AHLP-- 303 (754)
T ss_pred CcCChhHh---CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCc-----------------------ccch--
Confidence 55444321 244555555555544443322 24555555555444444 3221
Q ss_pred CCCCEEEcCCCcccccchhhhccccCeEECCCCCCCCCCccccCCCCccEEEccCCcc
Q 010567 177 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 234 (507)
Q Consensus 177 ~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 234 (507)
++|+.|++++|.+..++... ..+|+.|++++|.++.+|..+. ++|+.|++++|.+
T Consensus 304 ~sL~~L~Ls~N~Lt~LP~~l-~~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L 358 (754)
T PRK15370 304 SGITHLNVQSNSLTALPETL-PPGLKTLEAGENALTSLPASLP--PELQVLDVSKNQI 358 (754)
T ss_pred hhHHHHHhcCCccccCCccc-cccceeccccCCccccCChhhc--CcccEEECCCCCC
Confidence 24444455555444433221 1235555555555555444332 4555555555544
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=2.9e-19 Score=180.07 Aligned_cols=80 Identities=29% Similarity=0.465 Sum_probs=39.0
Q ss_pred CcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCCCCCCeEeCCCCCCCCCCCcccC---CCccCceEe
Q 010567 399 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL---LEPSLQALR 475 (507)
Q Consensus 399 ~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~~~~~~~---~~~~L~~L~ 475 (507)
++|+.|++++|++..+|..+. ++|+.|++++|.++.+|..+. ++|+.|++++|+++.+|..+.. ..+.+..|+
T Consensus 346 ~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~ 421 (754)
T PRK15370 346 PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRII 421 (754)
T ss_pred CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCCCCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEE
Confidence 455555555555554444332 355555555555555554432 2455555555555544443221 124455555
Q ss_pred ccCCCCC
Q 010567 476 LDGNPLR 482 (507)
Q Consensus 476 l~~n~~~ 482 (507)
+.+|+++
T Consensus 422 L~~Npls 428 (754)
T PRK15370 422 VEYNPFS 428 (754)
T ss_pred eeCCCcc
Confidence 5555554
No 19
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=5.6e-20 Score=143.60 Aligned_cols=160 Identities=27% Similarity=0.403 Sum_probs=96.2
Q ss_pred CCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceeec
Q 010567 36 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 115 (507)
Q Consensus 36 ~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l 115 (507)
...+++.|.++.|+++.+|..+..+.+|+.|++++|.+.++|..++.+++|+.|+++-|++...+.. |+.++-|+.|++
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprg-fgs~p~levldl 109 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRG-FGSFPALEVLDL 109 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccc-cCCCchhhhhhc
Confidence 3445555556666655555555555566666666666666655555666666666655555555544 555666666666
Q ss_pred CCcccc--cccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcCCCcccccc
Q 010567 116 SKNLLN--GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 193 (507)
Q Consensus 116 ~~~~~~--~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~ 193 (507)
.+|.+. .+|..|..+..|+-|.+++|.+..+|..++++++|+.|.+.+|.+-.+|..++.++.|+.|.+.+|+++-+|
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~vlp 189 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLTVLP 189 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceeeecC
Confidence 555552 345555555666666666666666666666666666666666666666666666666666666666666665
Q ss_pred hhh
Q 010567 194 VEA 196 (507)
Q Consensus 194 ~~~ 196 (507)
+..
T Consensus 190 pel 192 (264)
T KOG0617|consen 190 PEL 192 (264)
T ss_pred hhh
Confidence 544
No 20
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=1.8e-19 Score=140.84 Aligned_cols=201 Identities=33% Similarity=0.560 Sum_probs=167.2
Q ss_pred hhcCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceE
Q 010567 300 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 379 (507)
Q Consensus 300 ~~~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~ 379 (507)
++.++.++.|.++.+.++.+|+.+..+.+|+.|++++|++.+++.. +.++++|+.|+++-|.+...|- +|+.+|.|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~-issl~klr~lnvgmnrl~~lpr-gfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTS-ISSLPKLRILNVGMNRLNILPR-GFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChh-hhhchhhhheecchhhhhcCcc-ccCCCchhhh
Confidence 4556677788888888888888888888888888888888777655 4778888888888777766654 4888999999
Q ss_pred EEccCcccCC-CCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCCCCCCeEeCCCCCCC
Q 010567 380 LDLSYNIASL-PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 458 (507)
Q Consensus 380 L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~ 458 (507)
|++.+|.+.. ..+..|..+..|+.|++++|.+..+|..++++++|+.|.+++|++.++|..+..++.|++|.+.+|+++
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee
Confidence 9998887654 467778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCC--CccCceEeccCCCCCCccHHHHhhhHHHHHHHHHh
Q 010567 459 ALPPELGLL--EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 502 (507)
Q Consensus 459 ~~~~~~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~ 502 (507)
.+|+.+... ..+=+...+.+|++..--++.|......+.+|++.
T Consensus 187 vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQf~lG~shV~~yirt 232 (264)
T KOG0617|consen 187 VLPPELANLDLVGNKQVMRMEENPWVNPIAEQFLLGISHVIDYIRT 232 (264)
T ss_pred ecChhhhhhhhhhhHHHHhhhhCCCCChHHHHHHhhHHHHHHHHhh
Confidence 999887553 12445667889998888888888887788887764
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.66 E-value=3.3e-17 Score=153.94 Aligned_cols=125 Identities=22% Similarity=0.225 Sum_probs=60.7
Q ss_pred EEcCCCccc--ccCccccCCCcccEEeCCCCCCC-----CCchhhhcccCCCeEEcCCCcCcc-------CCccccCCCC
Q 010567 20 LDVSFNSIM--KIPDEIGSATALVKFDCSSNQLK-----ELPSSLGRCLNLSDFKASNNCITS-------LPEDLADCSK 85 (507)
Q Consensus 20 L~l~~~~i~--~~~~~~~~~~~L~~L~l~~~~l~-----~~~~~~~~~~~L~~L~l~~~~~~~-------l~~~~~~~~~ 85 (507)
|+|..+.+. .....+..+.+|+.++++++.++ .++..+...+++++++++++.+.. ++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 445454443 22333444555666666666653 344445555566666666655442 1233445556
Q ss_pred CcEEEcCCCcccccchhhhcCccc---cceeecCCccccc-----ccccccCC-CcccEEeccCCccc
Q 010567 86 MSKLDVEGNKLTVLSNNLIASWTM---LTELIASKNLLNG-----MPETIGSL-SRLIRLDLHQNRIL 144 (507)
Q Consensus 86 L~~L~l~~~~l~~~~~~~~~~~~~---L~~L~l~~~~~~~-----~~~~~~~~-~~L~~L~l~~~~i~ 144 (507)
|+.|++++|.+.......+..+.. |++|++++|.+.. +...+..+ ++|+.|++++|.++
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 150 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLE 150 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCC
Confidence 666666666554322222333332 5555555555431 11223333 44555555555443
No 22
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.61 E-value=6.8e-16 Score=145.05 Aligned_cols=229 Identities=23% Similarity=0.308 Sum_probs=169.9
Q ss_pred cHHhhcccCCCCEEEcCCCccc-----ccCccccCCCcccEEeCCCCCCCC-------CchhhhcccCCCeEEcCCCcCc
Q 010567 7 LLYVFDRLHMLKSLDVSFNSIM-----KIPDEIGSATALVKFDCSSNQLKE-------LPSSLGRCLNLSDFKASNNCIT 74 (507)
Q Consensus 7 ~~~~~~~~~~L~~L~l~~~~i~-----~~~~~~~~~~~L~~L~l~~~~l~~-------~~~~~~~~~~L~~L~l~~~~~~ 74 (507)
....|..++.|+.++++++.+. .++..+...+++++++++++.+.. ++..+..+++|++|++++|.+.
T Consensus 15 ~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 94 (319)
T cd00116 15 ATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALG 94 (319)
T ss_pred hHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCC
Confidence 4567778888999999999984 456667788889999999987663 3446777889999999999887
Q ss_pred -cCCccccCC---CCCcEEEcCCCcccc----cchhhhcCc-cccceeecCCcccc-----cccccccCCCcccEEeccC
Q 010567 75 -SLPEDLADC---SKMSKLDVEGNKLTV----LSNNLIASW-TMLTELIASKNLLN-----GMPETIGSLSRLIRLDLHQ 140 (507)
Q Consensus 75 -~l~~~~~~~---~~L~~L~l~~~~l~~----~~~~~~~~~-~~L~~L~l~~~~~~-----~~~~~~~~~~~L~~L~l~~ 140 (507)
..+..+..+ ++|+.|++++|++++ .....+..+ ++|+++++++|.+. .++..+..+.+|++|++++
T Consensus 95 ~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~ 174 (319)
T cd00116 95 PDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLAN 174 (319)
T ss_pred hhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcC
Confidence 333344334 459999999998873 222235666 89999999999886 2445667788999999999
Q ss_pred Cccc-----cCCCCCcCCCCCcEEEcCCCCCc-----cCCccccCCCCCCEEEcCCCcccccchh-----hh--ccccCe
Q 010567 141 NRIL-----SIPSSISGCCSLAEFYMGNNALS-----ALPAELGKLSKLGTLDLHSNQLKEYCVE-----AC--QLRLSV 203 (507)
Q Consensus 141 ~~i~-----~l~~~~~~~~~L~~L~l~~~~~~-----~l~~~l~~~~~L~~L~l~~~~~~~~~~~-----~~--~~~L~~ 203 (507)
|.+. .++..+..+++|++|++++|.++ .++..+..+++|++|++++|.+.+.... .. ...|+.
T Consensus 175 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~ 254 (319)
T cd00116 175 NGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLT 254 (319)
T ss_pred CCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceE
Confidence 9877 23344556679999999999876 2344567788999999999988752111 11 135888
Q ss_pred EECCCCCCCC-----CCccccCCCCccEEEccCCccc
Q 010567 204 LDLSNNSLSG-----LPPEIGKMTTLRKLLLTGNPLR 235 (507)
Q Consensus 204 l~l~~~~~~~-----~~~~l~~l~~L~~L~l~~~~~~ 235 (507)
+++++|.+++ +...+..+++|+.+++++|.+.
T Consensus 255 L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 255 LSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred EEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 9998888863 3334556678888888888764
No 23
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=4.7e-16 Score=144.10 Aligned_cols=212 Identities=29% Similarity=0.401 Sum_probs=182.2
Q ss_pred EEeCCCCCCCCCchhh--hcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceeecCCcc
Q 010567 42 KFDCSSNQLKELPSSL--GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 119 (507)
Q Consensus 42 ~L~l~~~~l~~~~~~~--~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~ 119 (507)
.|.+++..++.+|..- ..+..-...|++.|++..+|..+..+..|+.+.++.|.+-.|+.. ++++..|.+++++.|.
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~-i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEA-ICNLEALTFLDLSSNQ 132 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchh-hhhhhHHHHhhhccch
Confidence 5667777777776522 445555678999999999999988899999999999888877765 8899999999999999
Q ss_pred cccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcCCCcccccchhhhcc
Q 010567 120 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 199 (507)
Q Consensus 120 ~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 199 (507)
++.+|..+..++ |+.|-+++|.++.+|..++...+|..|+.+.|.+..+|..++.+..|+.+++..|++.+++......
T Consensus 133 lS~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~L 211 (722)
T KOG0532|consen 133 LSHLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL 211 (722)
T ss_pred hhcCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC
Confidence 999998887775 8899999999999999999889999999999999999999999999999999999999999999988
Q ss_pred ccCeEECCCCCCCCCCccccCCCCccEEEccCCccccccccccCCCCHHHHHHHHh
Q 010567 200 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 255 (507)
Q Consensus 200 ~L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (507)
.|..||++.|++..+|..+.+|+.|++|-+.+|++++-+..++.....+.++++..
T Consensus 212 pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~ 267 (722)
T KOG0532|consen 212 PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLST 267 (722)
T ss_pred ceeeeecccCceeecchhhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecc
Confidence 89999999999999999999999999999999999887777666655555554443
No 24
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.41 E-value=1.5e-14 Score=126.56 Aligned_cols=227 Identities=26% Similarity=0.344 Sum_probs=176.2
Q ss_pred HHhhcccCCCCEEEcCCCccc-----ccCccccCCCcccEEeCCCCC----CCCCch-------hhhcccCCCeEEcCCC
Q 010567 8 LYVFDRLHMLKSLDVSFNSIM-----KIPDEIGSATALVKFDCSSNQ----LKELPS-------SLGRCLNLSDFKASNN 71 (507)
Q Consensus 8 ~~~~~~~~~L~~L~l~~~~i~-----~~~~~~~~~~~L~~L~l~~~~----l~~~~~-------~~~~~~~L~~L~l~~~ 71 (507)
.+.+..+..++.++++|+.+. .+...+++.++|+..++++-- ..++|+ ++-.+++|++|+||+|
T Consensus 23 ~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDN 102 (382)
T KOG1909|consen 23 EEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDN 102 (382)
T ss_pred HHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccc
Confidence 356778899999999999886 456678889999999998742 225555 4556789999999999
Q ss_pred cCc-----cCCccccCCCCCcEEEcCCCcccccchhh-------------hcCccccceeecCCccccc-----cccccc
Q 010567 72 CIT-----SLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------IASWTMLTELIASKNLLNG-----MPETIG 128 (507)
Q Consensus 72 ~~~-----~l~~~~~~~~~L~~L~l~~~~l~~~~~~~-------------~~~~~~L~~L~l~~~~~~~-----~~~~~~ 128 (507)
.++ .+.+.++.++.|++|.+.+|.+....... ...-++||++...+|++.. +...+.
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~ 182 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQ 182 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHH
Confidence 887 23345778999999999999887433332 3445899999999999864 345677
Q ss_pred CCCcccEEeccCCccc-----cCCCCCcCCCCCcEEEcCCCCCc-----cCCccccCCCCCCEEEcCCCcccc-----cc
Q 010567 129 SLSRLIRLDLHQNRIL-----SIPSSISGCCSLAEFYMGNNALS-----ALPAELGKLSKLGTLDLHSNQLKE-----YC 193 (507)
Q Consensus 129 ~~~~L~~L~l~~~~i~-----~l~~~~~~~~~L~~L~l~~~~~~-----~l~~~l~~~~~L~~L~l~~~~~~~-----~~ 193 (507)
..+.|+.+.+++|.|. .+...+..|++|+.|++.+|.++ .+...+..+++|+.+++++|.+.+ +.
T Consensus 183 ~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~ 262 (382)
T KOG1909|consen 183 SHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFV 262 (382)
T ss_pred hccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHH
Confidence 8899999999999876 23456789999999999999988 456678888999999999997763 22
Q ss_pred hhhh--ccccCeEECCCCCCCC-----CCccccCCCCccEEEccCCcc
Q 010567 194 VEAC--QLRLSVLDLSNNSLSG-----LPPEIGKMTTLRKLLLTGNPL 234 (507)
Q Consensus 194 ~~~~--~~~L~~l~l~~~~~~~-----~~~~l~~l~~L~~L~l~~~~~ 234 (507)
.... .+.|+++.+.+|.++. +...+...+.|..|++++|.+
T Consensus 263 ~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 263 DALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 2221 2359999999998876 334456688999999999987
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.32 E-value=3.9e-14 Score=131.62 Aligned_cols=211 Identities=34% Similarity=0.515 Sum_probs=171.6
Q ss_pred EEecCCCCCCCChhhh--cCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCC
Q 010567 286 LSLEGMNLSAIPSEIW--EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 363 (507)
Q Consensus 286 l~l~~~~~~~~~~~~~--~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i 363 (507)
+.+.+..+..+|..-. .+.--+..+++.|.+..+|..+..+..|+.+.+.+|.+..++.. ++.+..|+.++++.|++
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~-i~~L~~lt~l~ls~Nql 133 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEA-ICNLEALTFLDLSSNQL 133 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchh-hhhhhHHHHhhhccchh
Confidence 4445555555554332 24445567788888888888888888888888888888777655 47788899999999988
Q ss_pred CCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccC
Q 010567 364 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 443 (507)
Q Consensus 364 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~ 443 (507)
+.++.. +..++ |+.|.+++|+++.. +..++..++|..|+.+.|.+..+|..+..+.+|+.|.++.|.+.++|+.+.
T Consensus 134 S~lp~~-lC~lp-Lkvli~sNNkl~~l-p~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~- 209 (722)
T KOG0532|consen 134 SHLPDG-LCDLP-LKVLIVSNNKLTSL-PEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELC- 209 (722)
T ss_pred hcCChh-hhcCc-ceeEEEecCccccC-CcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHh-
Confidence 888765 45554 78888888877653 455668899999999999999999999999999999999999999998887
Q ss_pred CCCCCeEeCCCCCCCCCCCcccCCCccCceEeccCCCCCCccHHHHhhhHHHHHHHHHh
Q 010567 444 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 502 (507)
Q Consensus 444 l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~ 502 (507)
.-.|..||++.|++..+|.++..+ +.|++|.|.+|++++-+.++.......+..||..
T Consensus 210 ~LpLi~lDfScNkis~iPv~fr~m-~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~ 267 (722)
T KOG0532|consen 210 SLPLIRLDFSCNKISYLPVDFRKM-RHLQVLQLENNPLQSPPAQICEKGKVHIFKYLST 267 (722)
T ss_pred CCceeeeecccCceeecchhhhhh-hhheeeeeccCCCCCChHHHHhccceeeeeeecc
Confidence 567899999999999999999887 9999999999999999999998888777777653
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.30 E-value=2.1e-12 Score=106.29 Aligned_cols=108 Identities=29% Similarity=0.409 Sum_probs=31.1
Q ss_pred CCCcccEEeCCCCCCCCCchhhh-cccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceee
Q 010567 36 SATALVKFDCSSNQLKELPSSLG-RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 114 (507)
Q Consensus 36 ~~~~L~~L~l~~~~l~~~~~~~~-~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~ 114 (507)
+..+++.|++++++++.+. .+. .+.+|+.|++++|.++.+ +.+..+++|++|++++|+++++.......+++|++|+
T Consensus 17 n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l-~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKL-EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccccccc-chhhhhcCCCEEECCCCCCccc-cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3445666666666666553 233 355666666666666666 3566666666666666666666544234566666666
Q ss_pred cCCccccccc--ccccCCCcccEEeccCCcccc
Q 010567 115 ASKNLLNGMP--ETIGSLSRLIRLDLHQNRILS 145 (507)
Q Consensus 115 l~~~~~~~~~--~~~~~~~~L~~L~l~~~~i~~ 145 (507)
+++|.+..+. ..+..+++|+.|++.+|+++.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 6666665433 234455666666666666553
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=4.6e-12 Score=122.46 Aligned_cols=194 Identities=34% Similarity=0.463 Sum_probs=112.2
Q ss_pred EEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhccc-CCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccc
Q 010567 20 LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 98 (507)
Q Consensus 20 L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~-~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~ 98 (507)
++...+.+..-...+.....++.+.+.++.++.+|....... +|+.|++++|.+..++..+..+++|+.|++++|++.+
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~ 177 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSD 177 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhhh
Confidence 444444442222223334556666666666666665555553 6666666666666665566666666666666666666
Q ss_pred cchhhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCC
Q 010567 99 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 178 (507)
Q Consensus 99 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~ 178 (507)
++.. ....+.|+.+++++|.+..+|........|+.+.+++|.+...+..+.++.++..+.+.++.+..++..++.+++
T Consensus 178 l~~~-~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~ 256 (394)
T COG4886 178 LPKL-LSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSN 256 (394)
T ss_pred hhhh-hhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccchhccccc
Confidence 5543 225666666666666666666554445556666666665555555556666666666666665555555566666
Q ss_pred CCEEEcCCCcccccchhhhccccCeEECCCCCCCCC
Q 010567 179 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 214 (507)
Q Consensus 179 L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~ 214 (507)
++.+++++|++.+++.......++.++++++.+...
T Consensus 257 l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 257 LETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred cceeccccccccccccccccCccCEEeccCcccccc
Confidence 666666666666655532233366666666655543
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=4.9e-12 Score=122.26 Aligned_cols=201 Identities=31% Similarity=0.429 Sum_probs=167.6
Q ss_pred EEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCC-CCcEEEcCCCcccccchhhhcCccccceeecCCccc
Q 010567 42 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS-KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 120 (507)
Q Consensus 42 ~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~-~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~ 120 (507)
.+....+.+..-...+..+..++.+++.++.+++++....... +|+.|++++|.+..++.. +..+++|+.|++..|.+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~-~~~l~~L~~L~l~~N~l 175 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSP-LRNLPNLKNLDLSFNDL 175 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhh-hhccccccccccCCchh
Confidence 5888888775444456666889999999999999988877774 999999999999988532 88999999999999999
Q ss_pred ccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcCCCcccccchhhhccc
Q 010567 121 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 200 (507)
Q Consensus 121 ~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~ 200 (507)
..++......+.|+.|+++++.+..+|........|+++.+++|.+...+..+..+.++..+.+..+++..++.......
T Consensus 176 ~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~ 255 (394)
T COG4886 176 SDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLS 255 (394)
T ss_pred hhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccchhcccc
Confidence 99988777889999999999999999887777788999999999766666778888899999889998887555444444
Q ss_pred -cCeEECCCCCCCCCCccccCCCCccEEEccCCccccccccccCC
Q 010567 201 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 244 (507)
Q Consensus 201 -L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~ 244 (507)
++.+++++|.++.++. ++...+++.++++++.+..+......+
T Consensus 256 ~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 256 NLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred ccceecccccccccccc-ccccCccCEEeccCccccccchhhhcc
Confidence 9999999999999877 889999999999999887665544433
No 29
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.28 E-value=8e-13 Score=113.40 Aligned_cols=129 Identities=38% Similarity=0.520 Sum_probs=63.3
Q ss_pred CCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcC
Q 010567 351 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 430 (507)
Q Consensus 351 ~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~ 430 (507)
..|+++++++|.|+.++.. ..-.|+++.|+++.|.+..... +..+++|+.||+++|.++.+..+-..+-+.++|.++
T Consensus 284 q~LtelDLS~N~I~~iDES-vKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 284 QELTELDLSGNLITQIDES-VKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhhccccccchhhhhhh-hhhccceeEEeccccceeeehh--hhhcccceEeecccchhHhhhhhHhhhcCEeeeehh
Confidence 4455555555555444422 3344555555555554443332 444455555555555555444444444555555555
Q ss_pred CCccccccccccCCCCCCeEeCCCCCCCCCCC--cccCCCccCceEeccCCCCCCc
Q 010567 431 QNSLQSIPEGFKNLTSLTELDLSDNNISALPP--ELGLLEPSLQALRLDGNPLRSI 484 (507)
Q Consensus 431 ~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~~~--~~~~~~~~L~~L~l~~n~~~~~ 484 (507)
+|.++++ .++..+=+|..||+++|+|..+.+ .++.+ |.|+.+.+.+||+..+
T Consensus 361 ~N~iE~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~L-PCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 361 QNKIETL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNL-PCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhHhhh-hhhHhhhhheeccccccchhhHHHhcccccc-cHHHHHhhcCCCcccc
Confidence 5555554 344455555555555555543222 23433 5555555555555433
No 30
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=1.2e-12 Score=118.01 Aligned_cols=183 Identities=14% Similarity=0.187 Sum_probs=127.2
Q ss_pred hhcccCCCCEEEcCCCcccccC--ccccCCCcccEEeCCCCCCCC---CchhhhcccCCCeEEcCCCcCccCCc--cccC
Q 010567 10 VFDRLHMLKSLDVSFNSIMKIP--DEIGSATALVKFDCSSNQLKE---LPSSLGRCLNLSDFKASNNCITSLPE--DLAD 82 (507)
Q Consensus 10 ~~~~~~~L~~L~l~~~~i~~~~--~~~~~~~~L~~L~l~~~~l~~---~~~~~~~~~~L~~L~l~~~~~~~l~~--~~~~ 82 (507)
.-.++++|+.+.+.++.+...+ .....|++++.|+++.|-+.. +......+++|+.|+++.|.+..... .-..
T Consensus 116 kQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 116 KQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred HhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 3457788888888888877554 356678889999998886653 33456778888899999887763322 1235
Q ss_pred CCCCcEEEcCCCcccc-cchhhhcCccccceeecCCcc-cccccccccCCCcccEEeccCCccccCC--CCCcCCCCCcE
Q 010567 83 CSKMSKLDVEGNKLTV-LSNNLIASWTMLTELIASKNL-LNGMPETIGSLSRLIRLDLHQNRILSIP--SSISGCCSLAE 158 (507)
Q Consensus 83 ~~~L~~L~l~~~~l~~-~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~L~~L~l~~~~i~~l~--~~~~~~~~L~~ 158 (507)
+++|+.|.++.|+++. -....+..+|.|+.|++..|. +..-......++.|+.|++++|++..++ ...+.++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 7888888898888872 112347788888888888874 2221223345677888888888888766 45677888888
Q ss_pred EEcCCCCCcc--CCcc-----ccCCCCCCEEEcCCCccccc
Q 010567 159 FYMGNNALSA--LPAE-----LGKLSKLGTLDLHSNQLKEY 192 (507)
Q Consensus 159 L~l~~~~~~~--l~~~-----l~~~~~L~~L~l~~~~~~~~ 192 (507)
|+++.|.+.. +|+. ...+++|+.|++..|++.+.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w 316 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDW 316 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccc
Confidence 8888887773 3333 34566777777777776543
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.25 E-value=4.8e-12 Score=104.16 Aligned_cols=125 Identities=27% Similarity=0.311 Sum_probs=55.2
Q ss_pred ccCCCCEEEcCCCcccccCcccc-CCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccc-cCCCCCcEEE
Q 010567 13 RLHMLKSLDVSFNSIMKIPDEIG-SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL-ADCSKMSKLD 90 (507)
Q Consensus 13 ~~~~L~~L~l~~~~i~~~~~~~~-~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~-~~~~~L~~L~ 90 (507)
+..++|.|+++|+.|..+.. +. .+.+|+.|++++|.++.+. .+..+++|++|++++|.++.++..+ ..+++|++|.
T Consensus 17 n~~~~~~L~L~~n~I~~Ie~-L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIEN-LGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S---TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccccccc-hhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 55569999999999987754 54 6889999999999999885 5888999999999999999997666 4699999999
Q ss_pred cCCCcccccch-hhhcCccccceeecCCcccccccc----cccCCCcccEEecc
Q 010567 91 VEGNKLTVLSN-NLIASWTMLTELIASKNLLNGMPE----TIGSLSRLIRLDLH 139 (507)
Q Consensus 91 l~~~~l~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~----~~~~~~~L~~L~l~ 139 (507)
+++|++.++.. ..++.+++|++|++.+|.+...+. .+..+++|+.||-.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 99999986443 348889999999999999865432 45678888888754
No 32
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.24 E-value=2.5e-12 Score=112.85 Aligned_cols=208 Identities=25% Similarity=0.325 Sum_probs=114.5
Q ss_pred hhccccccceEEecCCCCC-----CCChhhhcCCCccEEEcCCCccC----cCCc-------cccCCCcCcEEecccCcc
Q 010567 276 ATRLSVTSKELSLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQ----ELPP-------ELSSCASLQTLILSRNKI 339 (507)
Q Consensus 276 ~~~~~~~l~~l~l~~~~~~-----~~~~~~~~~~~L~~L~l~~~~~~----~i~~-------~~~~~~~L~~L~l~~~~l 339 (507)
.......++.++++++.+. .+...+...+.|+..++++.-.. .+|. .+..++.|+++++++|.+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 3344556677777777664 33444455566666666654211 1332 234556777777777765
Q ss_pred cCCch----HHhhcCCCCCEEEccCCCCCCCCcc-------------ccCCCCCceEEEccCcccCCCCCC----CCCCC
Q 010567 340 KDWPD----AILTSLSSLSCLKLDNNPLRQVPSD-------------GFKDIPMLQILDLSYNIASLPENP----PFSSL 398 (507)
Q Consensus 340 ~~~~~----~~~~~~~~L~~L~l~~~~i~~~~~~-------------~~~~~~~L~~L~l~~~~~~~~~~~----~~~~~ 398 (507)
..-.. ..+.++..|++|.|.+|.+...... ...+-++|+.+...+|.+...... .+...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~ 184 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSH 184 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhc
Confidence 54222 2335567777777777765532221 133456677777777665543322 23445
Q ss_pred CcCcEEEcccccCc-----ccccchhccCCCcEEEcCCCccc-----cccccccCCCCCCeEeCCCCCCCC-----CCCc
Q 010567 399 PHLQELYLRRMQLR-----EAPTDILRLQQLRILDLSQNSLQ-----SIPEGFKNLTSLTELDLSDNNISA-----LPPE 463 (507)
Q Consensus 399 ~~L~~L~l~~~~i~-----~l~~~~~~~~~L~~L~l~~~~l~-----~l~~~~~~l~~L~~L~l~~~~l~~-----~~~~ 463 (507)
+.|+.+.+..|.|. .+...+..|+.|+.|++++|-++ .+...+..++.|++|++++|.+++ +...
T Consensus 185 ~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~a 264 (382)
T KOG1909|consen 185 PTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDA 264 (382)
T ss_pred cccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHH
Confidence 66677777666655 22334556667777777776655 234445666666666666666542 1122
Q ss_pred ccCCCccCceEeccCCCCCC
Q 010567 464 LGLLEPSLQALRLDGNPLRS 483 (507)
Q Consensus 464 ~~~~~~~L~~L~l~~n~~~~ 483 (507)
+....|+|+++.+.+|.|+.
T Consensus 265 l~~~~p~L~vl~l~gNeIt~ 284 (382)
T KOG1909|consen 265 LKESAPSLEVLELAGNEITR 284 (382)
T ss_pred HhccCCCCceeccCcchhHH
Confidence 22223566666666666543
No 33
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.23 E-value=2.7e-12 Score=110.23 Aligned_cols=132 Identities=33% Similarity=0.393 Sum_probs=107.1
Q ss_pred CccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCccCCccccCCCCCCEEEcC
Q 010567 106 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 185 (507)
Q Consensus 106 ~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~ 185 (507)
.+..|+++++++|.++.+-+...-.++++.|++++|.+..+- .++.+++|+.|++++|.++.+..+-.++-+++.|.++
T Consensus 282 TWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 282 TWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQ-NLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hHhhhhhccccccchhhhhhhhhhccceeEEeccccceeeeh-hhhhcccceEeecccchhHhhhhhHhhhcCEeeeehh
Confidence 346788899999988888888888889999999999888764 3778889999999999888776666778899999999
Q ss_pred CCcccccchhhhccccCeEECCCCCCCCCC--ccccCCCCccEEEccCCcccccc
Q 010567 186 SNQLKEYCVEACQLRLSVLDLSNNSLSGLP--PEIGKMTTLRKLLLTGNPLRTLR 238 (507)
Q Consensus 186 ~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~--~~l~~l~~L~~L~l~~~~~~~~~ 238 (507)
+|.+.++....-..+|+.+|+++|+|..+. ..+++++.|+.+.+.+|++..+.
T Consensus 361 ~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 361 QNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 998887766555556899999999888743 45889999999999999886544
No 34
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=2.2e-12 Score=116.42 Aligned_cols=199 Identities=28% Similarity=0.277 Sum_probs=102.2
Q ss_pred ccceEEecCCCCCCCCh--hhhcCCCccEEEcCCCccCc---CCccccCCCcCcEEecccCcccCCc-hHHhhcCCCCCE
Q 010567 282 TSKELSLEGMNLSAIPS--EIWEAGEITKLDLSRNSIQE---LPPELSSCASLQTLILSRNKIKDWP-DAILTSLSSLSC 355 (507)
Q Consensus 282 ~l~~l~l~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~---i~~~~~~~~~L~~L~l~~~~l~~~~-~~~~~~~~~L~~ 355 (507)
.++.+.++++.+...+. ....+++++.|+++.|-+.. +.....++++|+.|+++.|.+.... ...-..++.|+.
T Consensus 122 kL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~ 201 (505)
T KOG3207|consen 122 KLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQ 201 (505)
T ss_pred hhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhhe
Confidence 44555555555544432 34446666666666665443 2222345666666666666554311 111123556666
Q ss_pred EEccCCCCCCCCc-cccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccc--cchhccCCCcEEEcCCC
Q 010567 356 LKLDNNPLRQVPS-DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP--TDILRLQQLRILDLSQN 432 (507)
Q Consensus 356 L~l~~~~i~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~--~~~~~~~~L~~L~l~~~ 432 (507)
|.++.|.++.-.. .....+|+|+.|.+.+|............+..|++|+|++|.+...+ .....++.|+.|+++.|
T Consensus 202 L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~t 281 (505)
T KOG3207|consen 202 LVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSST 281 (505)
T ss_pred EEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcccc
Confidence 6666665552111 11344566666666665433333333445556666666666655443 23455666666666666
Q ss_pred ccccc--ccc-----ccCCCCCCeEeCCCCCCCCCCC--cccCCCccCceEeccCCCC
Q 010567 433 SLQSI--PEG-----FKNLTSLTELDLSDNNISALPP--ELGLLEPSLQALRLDGNPL 481 (507)
Q Consensus 433 ~l~~l--~~~-----~~~l~~L~~L~l~~~~l~~~~~--~~~~~~~~L~~L~l~~n~~ 481 (507)
.+.++ |++ ....++|++|++..|++.+.+. .+... ++|+.|.+..|++
T Consensus 282 gi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l-~nlk~l~~~~n~l 338 (505)
T KOG3207|consen 282 GIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTL-ENLKHLRITLNYL 338 (505)
T ss_pred CcchhcCCCccchhhhcccccceeeecccCccccccccchhhcc-chhhhhhcccccc
Confidence 66543 333 3455666666666666543322 22323 5555555555554
No 35
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.06 E-value=1.8e-10 Score=119.02 Aligned_cols=138 Identities=25% Similarity=0.319 Sum_probs=108.2
Q ss_pred CCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCc--ccccchhhhcCccccceeecCCcc-cccccc
Q 010567 49 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK--LTVLSNNLIASWTMLTELIASKNL-LNGMPE 125 (507)
Q Consensus 49 ~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~--l~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~ 125 (507)
+..+.|.... ....+...+-++.+..++... .+++|++|-+.++. +..++..+|..++.|++|++++|. +..+|+
T Consensus 512 ~~~~~~~~~~-~~~~rr~s~~~~~~~~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~ 589 (889)
T KOG4658|consen 512 GLSEIPQVKS-WNSVRRMSLMNNKIEHIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPS 589 (889)
T ss_pred Cccccccccc-hhheeEEEEeccchhhccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCCh
Confidence 4444554322 256778888788777775444 56689999999886 778888889999999999999764 478999
Q ss_pred cccCCCcccEEeccCCccccCCCCCcCCCCCcEEEcCCCCCc-cCCccccCCCCCCEEEcCCCc
Q 010567 126 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQ 188 (507)
Q Consensus 126 ~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~-~l~~~l~~~~~L~~L~l~~~~ 188 (507)
.++.+-+|++|+++++.+..+|..+++++.|.+|++..+... .+|.....+++|++|.+....
T Consensus 590 ~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 590 SIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred HHhhhhhhhcccccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999999999999999999999999999999999887543 445556668899998876543
No 36
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.99 E-value=2.6e-10 Score=117.82 Aligned_cols=197 Identities=22% Similarity=0.274 Sum_probs=90.3
Q ss_pred CcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCc--CccCCc-cccCCCCCcEEEcCCCc-ccccchhhhcCcccccee
Q 010567 38 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC--ITSLPE-DLADCSKMSKLDVEGNK-LTVLSNNLIASWTMLTEL 113 (507)
Q Consensus 38 ~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~--~~~l~~-~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~L~~L 113 (507)
...+...+.++.+..++.... ++.|++|-+..+. +..++. .|..++.|++|++++|. +..+|.. ++.+-+||+|
T Consensus 523 ~~~rr~s~~~~~~~~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~-I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSS-IGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchhhccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChH-Hhhhhhhhcc
Confidence 344444444444444433222 2345555555543 333332 24445555555555442 2333333 5555555555
Q ss_pred ecCCcccccccccccCCCcccEEeccCCccc-cCCCCCcCCCCCcEEEcCCCCCc---cCCccccCCCCCCEEEcCCCcc
Q 010567 114 IASKNLLNGMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALS---ALPAELGKLSKLGTLDLHSNQL 189 (507)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~L~l~~~~~~---~l~~~l~~~~~L~~L~l~~~~~ 189 (507)
+++++.+..+|..+.+++.|.+|++..+.-. .+|.....+++|++|.+...... ..-..+..+.+|+.+.+.....
T Consensus 601 ~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 601 DLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred cccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 5555555555555555555555555544322 22233333555555555443311 1112233334444443322221
Q ss_pred cccchhhhccc----cCeEECCCCCCCCCCccccCCCCccEEEccCCcccc
Q 010567 190 KEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 236 (507)
Q Consensus 190 ~~~~~~~~~~~----L~~l~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 236 (507)
.-+........ .+.+.+.++.....+..+..+.+|+.|.+.++...+
T Consensus 681 ~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 681 LLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred HhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCch
Confidence 00000000011 223333334444555667888999999998887653
No 37
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.98 E-value=1.6e-10 Score=111.83 Aligned_cols=221 Identities=28% Similarity=0.352 Sum_probs=130.5
Q ss_pred hcccCCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEE
Q 010567 11 FDRLHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 90 (507)
Q Consensus 11 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~ 90 (507)
+..+++|+.+++.++.|..+...+..+++|++|++++|.++.+. .+..+..|+.|++++|.+..+ ..+..+++|+.++
T Consensus 91 l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~L~l~~N~i~~~-~~~~~l~~L~~l~ 168 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE-GLSTLTLLKELNLSGNLISDI-SGLESLKSLKLLD 168 (414)
T ss_pred cccccceeeeeccccchhhcccchhhhhcchheecccccccccc-chhhccchhhheeccCcchhc-cCCccchhhhccc
Confidence 45566666777777766665544666667777777776666553 245555566777777766666 3444566677777
Q ss_pred cCCCcccccch-hhhcCccccceeecCCcccccccccccCCCcccEEeccCCccccCCCCCcCCC--CCcEEEcCCCCCc
Q 010567 91 VEGNKLTVLSN-NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC--SLAEFYMGNNALS 167 (507)
Q Consensus 91 l~~~~l~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~--~L~~L~l~~~~~~ 167 (507)
+++|++..+.. . ...+..++.+.+.+|.+..+. .+..+..+..+++..+.+..+. .+..+. +|+.+++.++.+.
T Consensus 169 l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~-~~~~~~~l~~~~l~~n~i~~~~-~l~~~~~~~L~~l~l~~n~i~ 245 (414)
T KOG0531|consen 169 LSYNRIVDIENDE-LSELISLEELDLGGNSIREIE-GLDLLKKLVLLSLLDNKISKLE-GLNELVMLHLRELYLSGNRIS 245 (414)
T ss_pred CCcchhhhhhhhh-hhhccchHHHhccCCchhccc-chHHHHHHHHhhcccccceecc-CcccchhHHHHHHhcccCccc
Confidence 77766666655 2 356666666666666655432 2223333444455555555331 111222 3777888888777
Q ss_pred cCCccccCCCCCCEEEcCCCcccccchhhhccccCeEECCCCCCCC----CCc-cccCCCCccEEEccCCcccc
Q 010567 168 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG----LPP-EIGKMTTLRKLLLTGNPLRT 236 (507)
Q Consensus 168 ~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~----~~~-~l~~l~~L~~L~l~~~~~~~ 236 (507)
..+..+..+.++..+++..+++...........+..+....+.+.. ... .....+.++.+.+.++....
T Consensus 246 ~~~~~~~~~~~l~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 246 RSPEGLENLKNLPVLDLSSNRISNLEGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cccccccccccccccchhhccccccccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 7666677777888888887777655544444444455555554442 111 14455667777777766544
No 38
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.91 E-value=1.7e-10 Score=111.64 Aligned_cols=196 Identities=34% Similarity=0.433 Sum_probs=140.8
Q ss_pred ccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCC
Q 010567 282 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 361 (507)
Q Consensus 282 ~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~ 361 (507)
.++.+.++.+.+..+...+..+.+++.+++.++.+..+...+..+++|++|++++|.++.+.. +..++.|+.|++.+|
T Consensus 73 ~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N 150 (414)
T KOG0531|consen 73 SLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGN 150 (414)
T ss_pred hHHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccc--hhhccchhhheeccC
Confidence 344555666666665555677889999999999999887657889999999999999988765 356777999999999
Q ss_pred CCCCCCccccCCCCCceEEEccCcccCCCCC-CCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCcccccccc
Q 010567 362 PLRQVPSDGFKDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 440 (507)
Q Consensus 362 ~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~ 440 (507)
.++.+.. +..+++|+.+++++|.+..... . ...+.+++.++++++.+..+. .+..+..+..+++.+|.++.+ +.
T Consensus 151 ~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~-~~~~~~~l~~~~l~~n~i~~~-~~ 225 (414)
T KOG0531|consen 151 LISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE-GLDLLKKLVLLSLLDNKISKL-EG 225 (414)
T ss_pred cchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc-chHHHHHHHHhhcccccceec-cC
Confidence 9888765 5668999999999998776655 3 577888999999999887553 222333444446677766655 22
Q ss_pred ccCCCC--CCeEeCCCCCCCCCCCcccCCCccCceEeccCCCCCCcc
Q 010567 441 FKNLTS--LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 485 (507)
Q Consensus 441 ~~~l~~--L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~ 485 (507)
+..+.. |+.+++.+|++..++..+..+ ..+..+++.+|.+..+.
T Consensus 226 l~~~~~~~L~~l~l~~n~i~~~~~~~~~~-~~l~~l~~~~n~~~~~~ 271 (414)
T KOG0531|consen 226 LNELVMLHLRELYLSGNRISRSPEGLENL-KNLPVLDLSSNRISNLE 271 (414)
T ss_pred cccchhHHHHHHhcccCcccccccccccc-ccccccchhhccccccc
Confidence 333333 777777777777665444444 67777777777765554
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.82 E-value=2.1e-09 Score=72.68 Aligned_cols=58 Identities=45% Similarity=0.697 Sum_probs=27.6
Q ss_pred CCcEEEcCCCcccccc-ccccCCCCCCeEeCCCCCCCCCCCcccCCCccCceEeccCCC
Q 010567 423 QLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 480 (507)
Q Consensus 423 ~L~~L~l~~~~l~~l~-~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~ 480 (507)
+|++|++++|+++.+| ..+.++++|++|++++|.++.+++..+..+++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 3444455555444443 234445555555555555544444443333455555555544
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=8e-09 Score=69.78 Aligned_cols=59 Identities=39% Similarity=0.584 Sum_probs=26.9
Q ss_pred CCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEccccc
Q 010567 352 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 410 (507)
Q Consensus 352 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 410 (507)
+|++|++++|+++.++...|..+++|++|++++|.+....+..|..+++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444444444444444444444444444444444444444443
No 41
>PLN03150 hypothetical protein; Provisional
Probab=98.65 E-value=5.7e-08 Score=98.48 Aligned_cols=104 Identities=32% Similarity=0.388 Sum_probs=55.1
Q ss_pred ceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCc-ccccchhccCCCcEEEcCCCccc-cccccccCCCCCCeEeCCC
Q 010567 377 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSD 454 (507)
Q Consensus 377 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~L~l~~~~l~-~l~~~~~~l~~L~~L~l~~ 454 (507)
++.|+|++|.+.+..+..+..+++|+.|+|++|.+. .+|..+..+++|+.|++++|.+. .+|+.+.++++|++|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 455555555555555555555555555555555554 45555555555555555555555 4455555555555555555
Q ss_pred CCCC-CCCCcccCCCccCceEeccCCC
Q 010567 455 NNIS-ALPPELGLLEPSLQALRLDGNP 480 (507)
Q Consensus 455 ~~l~-~~~~~~~~~~~~L~~L~l~~n~ 480 (507)
|.++ .+|..+.....++..+++.+|+
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 5554 4444443322344455555443
No 42
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.65 E-value=3e-10 Score=109.25 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=98.5
Q ss_pred HHhhcccCCCCEEEcCCCcccccCccccCC---------------------------------CcccEEeCCCCCCCCCc
Q 010567 8 LYVFDRLHMLKSLDVSFNSIMKIPDEIGSA---------------------------------TALVKFDCSSNQLKELP 54 (507)
Q Consensus 8 ~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~---------------------------------~~L~~L~l~~~~l~~~~ 54 (507)
|-.+..|+.||+|.+.++.+... .++..+ ..|...++++|.++.+-
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~-~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~mD 180 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA-KGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVLMD 180 (1096)
T ss_pred CceeccccceeeEEecCcchhhh-hhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHhHH
Confidence 44567899999999999876521 111111 14555566666666666
Q ss_pred hhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceeecCCcccccccccccCCCccc
Q 010567 55 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 134 (507)
Q Consensus 55 ~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~ 134 (507)
.++.-++.|++|++++|.++.. +.+..|++|++|++++|.+..++.-...+|. |..|.+++|.++.+- .+.++.+|+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v-~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~-gie~LksL~ 257 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV-DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR-GIENLKSLY 257 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh-HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh-hHHhhhhhh
Confidence 6666666777777777777766 3666777777777777777766654445555 777777777665542 455666777
Q ss_pred EEeccCCccccCC--CCCcCCCCCcEEEcCCCCCc
Q 010567 135 RLDLHQNRILSIP--SSISGCCSLAEFYMGNNALS 167 (507)
Q Consensus 135 ~L~l~~~~i~~l~--~~~~~~~~L~~L~l~~~~~~ 167 (507)
.||+++|-+.... ..++.+..|+.|++.+|.+-
T Consensus 258 ~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 258 GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7777776665332 23455566666666666543
No 43
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=2.1e-10 Score=110.30 Aligned_cols=179 Identities=28% Similarity=0.354 Sum_probs=120.6
Q ss_pred ChhhhcCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcccCCchHHhh----------cCCCCCEEEccCCCCCCC
Q 010567 297 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT----------SLSSLSCLKLDNNPLRQV 366 (507)
Q Consensus 297 ~~~~~~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~----------~~~~L~~L~l~~~~i~~~ 366 (507)
|..++.+.+|+.|.+.+|++...-....--..|++|.-. +.+..+ .+.|. ....|...+.+.|.+..+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~-~Sl~Al-~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~m 179 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICH-NSLDAL-RHVFASCGGDISNSPVWNKLATASFSYNRLVLM 179 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhh-ccHHHH-HHHHHHhccccccchhhhhHhhhhcchhhHHhH
Confidence 556677778888888888765421111111223333221 111110 00111 123566677777776665
Q ss_pred CccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCCCC
Q 010567 367 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 446 (507)
Q Consensus 367 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~ 446 (507)
+. +++-++.|+.|+|+.|++.... .+..+++|+.|||++|++..+|..-..-..|+.|.+++|.++++ -++.++++
T Consensus 180 D~-SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN~l~tL-~gie~Lks 255 (1096)
T KOG1859|consen 180 DE-SLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNNALTTL-RGIENLKS 255 (1096)
T ss_pred HH-HHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhhheeeeecccHHHhh-hhHHhhhh
Confidence 54 3777888888899888877655 57788999999999999998886654445699999999999988 57889999
Q ss_pred CCeEeCCCCCCCCCCCc--ccCCCccCceEeccCCCCC
Q 010567 447 LTELDLSDNNISALPPE--LGLLEPSLQALRLDGNPLR 482 (507)
Q Consensus 447 L~~L~l~~~~l~~~~~~--~~~~~~~L~~L~l~~n~~~ 482 (507)
|+.||+++|-+....+- +..+ ..|+.|+|.|||+-
T Consensus 256 L~~LDlsyNll~~hseL~pLwsL-s~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 256 LYGLDLSYNLLSEHSELEPLWSL-SSLIVLWLEGNPLC 292 (1096)
T ss_pred hhccchhHhhhhcchhhhHHHHH-HHHHHHhhcCCccc
Confidence 99999999976643331 2333 78999999999985
No 44
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.55 E-value=2.2e-08 Score=85.35 Aligned_cols=181 Identities=20% Similarity=0.239 Sum_probs=123.8
Q ss_pred hhcccCCCCEEEcCCCccc-----ccCccccCCCcccEEeCCCCCCC----CCc-------hhhhcccCCCeEEcCCCcC
Q 010567 10 VFDRLHMLKSLDVSFNSIM-----KIPDEIGSATALVKFDCSSNQLK----ELP-------SSLGRCLNLSDFKASNNCI 73 (507)
Q Consensus 10 ~~~~~~~L~~L~l~~~~i~-----~~~~~~~~~~~L~~L~l~~~~l~----~~~-------~~~~~~~~L~~L~l~~~~~ 73 (507)
.+.-+..++.+|+|||.|. .+...+++-++|+..++++-... ++| .++-.|++|+.+++|+|.+
T Consensus 25 el~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAf 104 (388)
T COG5238 25 ELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAF 104 (388)
T ss_pred HHHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeecccccc
Confidence 4445788899999999886 35566777888999998874222 333 3566789999999999987
Q ss_pred c-cC----CccccCCCCCcEEEcCCCcccccchhh-------------hcCccccceeecCCcccccccc-----cccCC
Q 010567 74 T-SL----PEDLADCSKMSKLDVEGNKLTVLSNNL-------------IASWTMLTELIASKNLLNGMPE-----TIGSL 130 (507)
Q Consensus 74 ~-~l----~~~~~~~~~L~~L~l~~~~l~~~~~~~-------------~~~~~~L~~L~l~~~~~~~~~~-----~~~~~ 130 (507)
+ .. .+.++.-+.|++|.+++|.+.-+...- .+.-|.|+++....|++...+. .+..-
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh 184 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESH 184 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhh
Confidence 7 22 245778889999999988776433221 3355788888888888765442 23334
Q ss_pred CcccEEeccCCccc--cC----CCCCcCCCCCcEEEcCCCCCc-----cCCccccCCCCCCEEEcCCCccc
Q 010567 131 SRLIRLDLHQNRIL--SI----PSSISGCCSLAEFYMGNNALS-----ALPAELGKLSKLGTLDLHSNQLK 190 (507)
Q Consensus 131 ~~L~~L~l~~~~i~--~l----~~~~~~~~~L~~L~l~~~~~~-----~l~~~l~~~~~L~~L~l~~~~~~ 190 (507)
..|+.+.+.+|.|. .+ -..+.++++|+.|++.+|.++ .+...++..+.|+.|++.+|-++
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls 255 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLS 255 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhc
Confidence 57788888888765 11 123566788888888888777 23344555566788877777554
No 45
>PLN03150 hypothetical protein; Provisional
Probab=98.48 E-value=4.5e-07 Score=92.05 Aligned_cols=104 Identities=29% Similarity=0.407 Sum_probs=83.6
Q ss_pred CCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCc-ccccchhccCCCcEEEcCC
Q 010567 353 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQ 431 (507)
Q Consensus 353 L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~L~l~~ 431 (507)
++.|+|+++.+.+..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|++. .+|..+..+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 677888888887766666888888888888888888877777888888888888888887 6788888888888888888
Q ss_pred Cccc-cccccccC-CCCCCeEeCCCCC
Q 010567 432 NSLQ-SIPEGFKN-LTSLTELDLSDNN 456 (507)
Q Consensus 432 ~~l~-~l~~~~~~-l~~L~~L~l~~~~ 456 (507)
|.++ .+|..+.. ..++..+++.+|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 8887 67777654 3467788888875
No 46
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.48 E-value=2.9e-09 Score=91.77 Aligned_cols=148 Identities=20% Similarity=0.245 Sum_probs=61.8
Q ss_pred ccEEeCCCCCCC--CCchhhhcccCCCeEEcCCCcCc-cCCccccCCCCCcEEEcCCC-cccccc-hhhhcCccccceee
Q 010567 40 LVKFDCSSNQLK--ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGN-KLTVLS-NNLIASWTMLTELI 114 (507)
Q Consensus 40 L~~L~l~~~~l~--~~~~~~~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~l~~~-~l~~~~-~~~~~~~~~L~~L~ 114 (507)
+++++++...++ ++--.+..|.+|+.|.+.+..+. .+...+....+|+.|+++.+ ++++.. .-.+.+|+.|..|+
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LN 266 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELN 266 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcC
Confidence 445555444443 22233444455555555544444 23334444455555555443 233211 11244455555555
Q ss_pred cCCccccc-cc-cccc-CCCcccEEeccCCcc----ccCCCCCcCCCCCcEEEcCCC-CCc-cCCccccCCCCCCEEEcC
Q 010567 115 ASKNLLNG-MP-ETIG-SLSRLIRLDLHQNRI----LSIPSSISGCCSLAEFYMGNN-ALS-ALPAELGKLSKLGTLDLH 185 (507)
Q Consensus 115 l~~~~~~~-~~-~~~~-~~~~L~~L~l~~~~i----~~l~~~~~~~~~L~~L~l~~~-~~~-~l~~~l~~~~~L~~L~l~ 185 (507)
++.|.... .. ..+. --.+|+.|+++++.- ..+..-...|++|.+|++++| .++ +....+-+++.|+++.++
T Consensus 267 lsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSls 346 (419)
T KOG2120|consen 267 LSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLS 346 (419)
T ss_pred chHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehh
Confidence 55544321 10 0000 113445555554421 111111344555555555555 222 222234455566666665
Q ss_pred CC
Q 010567 186 SN 187 (507)
Q Consensus 186 ~~ 187 (507)
.|
T Consensus 347 RC 348 (419)
T KOG2120|consen 347 RC 348 (419)
T ss_pred hh
Confidence 55
No 47
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.39 E-value=2.1e-08 Score=76.28 Aligned_cols=107 Identities=24% Similarity=0.299 Sum_probs=54.9
Q ss_pred ccEEeCCCCCCCCCchhhh---cccCCCeEEcCCCcCccCCccccC-CCCCcEEEcCCCcccccchhhhcCccccceeec
Q 010567 40 LVKFDCSSNQLKELPSSLG---RCLNLSDFKASNNCITSLPEDLAD-CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 115 (507)
Q Consensus 40 L~~L~l~~~~l~~~~~~~~---~~~~L~~L~l~~~~~~~l~~~~~~-~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l 115 (507)
+..+++++|++..++...+ ....|+.+++++|.+.+.|..|.. ++.+++|++++|.+++++.. ++.++.|+.+++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhccc
Confidence 3344555555544433322 223344445555555555544432 33555555555555555555 555566666666
Q ss_pred CCcccccccccccCCCcccEEeccCCccccCC
Q 010567 116 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 147 (507)
Q Consensus 116 ~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~ 147 (507)
+.|.+...|+.+..+.++-+|+..++....++
T Consensus 108 ~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 108 RFNPLNAEPRVIAPLIKLDMLDSPENARAEID 139 (177)
T ss_pred ccCccccchHHHHHHHhHHHhcCCCCccccCc
Confidence 65555555555555555555555555544443
No 48
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.39 E-value=6.7e-07 Score=73.11 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=71.6
Q ss_pred cEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceeecCCccc
Q 010567 41 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 120 (507)
Q Consensus 41 ~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~ 120 (507)
+.+++.+.++..+-.--....+...+|+++|.+..+ ..|..+++|.+|.++.|+++.|.+..-..+++|..|.+.+|.+
T Consensus 22 ~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 22 RELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRKL-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred cccccccccccchhhccccccccceecccccchhhc-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcch
Confidence 445555554443322111123567888888888877 4778888899999998888888887666777888888888887
Q ss_pred cccc--ccccCCCcccEEeccCCcccc
Q 010567 121 NGMP--ETIGSLSRLIRLDLHQNRILS 145 (507)
Q Consensus 121 ~~~~--~~~~~~~~L~~L~l~~~~i~~ 145 (507)
..+. +.+..|++|++|.+-+|+++.
T Consensus 101 ~~l~dl~pLa~~p~L~~Ltll~Npv~~ 127 (233)
T KOG1644|consen 101 QELGDLDPLASCPKLEYLTLLGNPVEH 127 (233)
T ss_pred hhhhhcchhccCCccceeeecCCchhc
Confidence 6654 345667777777777776653
No 49
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=9.5e-09 Score=88.70 Aligned_cols=175 Identities=26% Similarity=0.222 Sum_probs=115.4
Q ss_pred CCccEEEcCCCccCc--CCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCC-CCCCCc-cccCCCCCceE
Q 010567 304 GEITKLDLSRNSIQE--LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-LRQVPS-DGFKDIPMLQI 379 (507)
Q Consensus 304 ~~L~~L~l~~~~~~~--i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~-i~~~~~-~~~~~~~~L~~ 379 (507)
+.++.+++++..++. +-..++.|.+|+.|.+.+..+.+-....+....+|+.++++.|+ ++.-.. .-+.+|+.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 357777877766554 22235678888888888888887777777788888888888864 222111 12577888888
Q ss_pred EEccCcccCCCCCCC-C-CCCCcCcEEEccccc----CcccccchhccCCCcEEEcCCCc-cc-cccccccCCCCCCeEe
Q 010567 380 LDLSYNIASLPENPP-F-SSLPHLQELYLRRMQ----LREAPTDILRLQQLRILDLSQNS-LQ-SIPEGFKNLTSLTELD 451 (507)
Q Consensus 380 L~l~~~~~~~~~~~~-~-~~~~~L~~L~l~~~~----i~~l~~~~~~~~~L~~L~l~~~~-l~-~l~~~~~~l~~L~~L~ 451 (507)
|+++-|.+....-.. . ..-++|+.|+++++. ...+..-...|++|.+|++++|. ++ +.-..+.+++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 888877544321111 1 223688888888883 22443345678899999999885 33 3345567889999999
Q ss_pred CCCCC-CC-CCCCcccCCCccCceEeccCC
Q 010567 452 LSDNN-IS-ALPPELGLLEPSLQALRLDGN 479 (507)
Q Consensus 452 l~~~~-l~-~~~~~~~~~~~~L~~L~l~~n 479 (507)
++.|. |- ...-.+... |+|.+|++-||
T Consensus 345 lsRCY~i~p~~~~~l~s~-psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYDIIPETLLELNSK-PSLVYLDVFGC 373 (419)
T ss_pred hhhhcCCChHHeeeeccC-cceEEEEeccc
Confidence 99884 22 111123344 88999988887
No 50
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.36 E-value=4.7e-06 Score=77.65 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=17.5
Q ss_pred CCCcEEEcCCCccccccccccCCCCCCeEeCCCC
Q 010567 422 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 455 (507)
Q Consensus 422 ~~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~ 455 (507)
++|++|++++|....+|..+. .+|++|+++.+
T Consensus 156 sSLk~L~Is~c~~i~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 156 PSLKTLSLTGCSNIILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred CcccEEEecCCCcccCccccc--ccCcEEEeccc
Confidence 456666666665544444333 45666666554
No 51
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.34 E-value=3.6e-07 Score=56.24 Aligned_cols=38 Identities=42% Similarity=0.661 Sum_probs=19.6
Q ss_pred CCcEEEcCCCccccccccccCCCCCCeEeCCCCCCCCC
Q 010567 423 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 460 (507)
Q Consensus 423 ~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~ 460 (507)
+|++|++++|+++++|..+.+|++|+.|++++|+++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCC
Confidence 45555555555555554455555555555555555543
No 52
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.33 E-value=2.3e-08 Score=76.11 Aligned_cols=112 Identities=17% Similarity=0.256 Sum_probs=93.5
Q ss_pred cCCCeEEcCCCcCccCCcc---ccCCCCCcEEEcCCCcccccchhhhcCccccceeecCCcccccccccccCCCcccEEe
Q 010567 61 LNLSDFKASNNCITSLPED---LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 137 (507)
Q Consensus 61 ~~L~~L~l~~~~~~~l~~~---~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~ 137 (507)
..+-.++++.|.+..+++. +....+|+..++++|.+.++++..-...+..+.+++.+|.++++|+.+..++.|+.|+
T Consensus 27 kE~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 27 KELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLN 106 (177)
T ss_pred HHhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcc
Confidence 4567889999988766654 4556778888999999999999877888899999999999999998899999999999
Q ss_pred ccCCccccCCCCCcCCCCCcEEEcCCCCCccCCcc
Q 010567 138 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 172 (507)
Q Consensus 138 l~~~~i~~l~~~~~~~~~L~~L~l~~~~~~~l~~~ 172 (507)
++.|++...|..+..+.++-.|+..++....+|-.
T Consensus 107 l~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 107 LRFNPLNAEPRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred cccCccccchHHHHHHHhHHHhcCCCCccccCcHH
Confidence 99999988888777788888888888777766544
No 53
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.27 E-value=3.9e-08 Score=89.01 Aligned_cols=106 Identities=25% Similarity=0.227 Sum_probs=45.2
Q ss_pred CCCCceEEEccCcc-cCCCCCCCC-CCCCcCcEEEcccccCc---ccccchhccCCCcEEEcCCCcc-c-----cccccc
Q 010567 373 DIPMLQILDLSYNI-ASLPENPPF-SSLPHLQELYLRRMQLR---EAPTDILRLQQLRILDLSQNSL-Q-----SIPEGF 441 (507)
Q Consensus 373 ~~~~L~~L~l~~~~-~~~~~~~~~-~~~~~L~~L~l~~~~i~---~l~~~~~~~~~L~~L~l~~~~l-~-----~l~~~~ 441 (507)
++++|+.+.+.+|. +++.....+ .+++.|+.+++.++... .+..-..+++.|+.+.++.|.. + .+..+-
T Consensus 318 ~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~ 397 (483)
T KOG4341|consen 318 HCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSS 397 (483)
T ss_pred CCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhcc
Confidence 34455555554442 222221112 34455555555555322 1222223455555555555532 1 112233
Q ss_pred cCCCCCCeEeCCCCCCC--CCCCcccCCCccCceEeccCC
Q 010567 442 KNLTSLTELDLSDNNIS--ALPPELGLLEPSLQALRLDGN 479 (507)
Q Consensus 442 ~~l~~L~~L~l~~~~l~--~~~~~~~~~~~~L~~L~l~~n 479 (507)
..+..|+.+.+++|+.. ...+.+.. |++|+.+++-+|
T Consensus 398 c~~~~l~~lEL~n~p~i~d~~Le~l~~-c~~Leri~l~~~ 436 (483)
T KOG4341|consen 398 CSLEGLEVLELDNCPLITDATLEHLSI-CRNLERIELIDC 436 (483)
T ss_pred ccccccceeeecCCCCchHHHHHHHhh-Ccccceeeeech
Confidence 44555555555555432 22222222 255555555555
No 54
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.26 E-value=2.2e-07 Score=80.50 Aligned_cols=155 Identities=23% Similarity=0.340 Sum_probs=83.5
Q ss_pred CCCccEEEcCCCccCc---CCccccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCC--CCCccccCCCCCc
Q 010567 303 AGEITKLDLSRNSIQE---LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR--QVPSDGFKDIPML 377 (507)
Q Consensus 303 ~~~L~~L~l~~~~~~~---i~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~--~~~~~~~~~~~~L 377 (507)
++.++++++.+|.+++ +...+.++|.|+.|++++|.+.......=....+|+.+-+.+..+. ... ..+..+|.+
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~-s~l~~lP~v 148 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQST-SSLDDLPKV 148 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhh-hhhhcchhh
Confidence 4556666666665554 3333556666666666666554322111013345666666555332 121 224555666
Q ss_pred eEEEccCcccCCC-----CCCCC------------------------CCCCcCcEEEcccccCccccc--chhccCCCcE
Q 010567 378 QILDLSYNIASLP-----ENPPF------------------------SSLPHLQELYLRRMQLREAPT--DILRLQQLRI 426 (507)
Q Consensus 378 ~~L~l~~~~~~~~-----~~~~~------------------------~~~~~L~~L~l~~~~i~~l~~--~~~~~~~L~~ 426 (507)
+.|.++.|..... ....+ ..+|++..+.+..|.+..... .....+.+..
T Consensus 149 telHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~ 228 (418)
T KOG2982|consen 149 TELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSC 228 (418)
T ss_pred hhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchh
Confidence 6666655522111 00000 125666666666666653322 2334566777
Q ss_pred EEcCCCcccccc--ccccCCCCCCeEeCCCCCCC
Q 010567 427 LDLSQNSLQSIP--EGFKNLTSLTELDLSDNNIS 458 (507)
Q Consensus 427 L~l~~~~l~~l~--~~~~~l~~L~~L~l~~~~l~ 458 (507)
|+++.++|.++. +.+.++++|..|.+.++.+.
T Consensus 229 LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 229 LNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 777777777553 44677888888888888765
No 55
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.25 E-value=2.9e-08 Score=89.79 Aligned_cols=172 Identities=17% Similarity=0.140 Sum_probs=71.5
Q ss_pred CCEEEcCCCccc---ccCccccCCCcccEEeCCCCC-CC--CCchhhhcccCCCeEEcCCC-cCcc--CCccccCCCCCc
Q 010567 17 LKSLDVSFNSIM---KIPDEIGSATALVKFDCSSNQ-LK--ELPSSLGRCLNLSDFKASNN-CITS--LPEDLADCSKMS 87 (507)
Q Consensus 17 L~~L~l~~~~i~---~~~~~~~~~~~L~~L~l~~~~-l~--~~~~~~~~~~~L~~L~l~~~-~~~~--l~~~~~~~~~L~ 87 (507)
||.|.++|+.-. .+-..-+.|++++.|.+.+|. ++ .+...-..|+.|++|++..| .++. +-.....|++|+
T Consensus 140 lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~ 219 (483)
T KOG4341|consen 140 LKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLK 219 (483)
T ss_pred cccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHH
Confidence 555555555321 222223455666666665553 22 22223344556666666553 3331 111223455666
Q ss_pred EEEcCCCccc-c-cchhhhcCccccceeecCCcccc---cccccccCCCcccEEeccCCcccc---CCCCCcCCCCCcEE
Q 010567 88 KLDVEGNKLT-V-LSNNLIASWTMLTELIASKNLLN---GMPETIGSLSRLIRLDLHQNRILS---IPSSISGCCSLAEF 159 (507)
Q Consensus 88 ~L~l~~~~l~-~-~~~~~~~~~~~L~~L~l~~~~~~---~~~~~~~~~~~L~~L~l~~~~i~~---l~~~~~~~~~L~~L 159 (507)
+++++.|... . -....+.++..++.+.+++|.=. .+...-..+..+.++++..|...+ +...-.++..|+.|
T Consensus 220 ~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l 299 (483)
T KOG4341|consen 220 YLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVL 299 (483)
T ss_pred HhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhh
Confidence 6666554321 1 01112444555555555443211 111112234444444444442211 11112334555555
Q ss_pred EcCCCCC-cc--CCccccCCCCCCEEEcCCCc
Q 010567 160 YMGNNAL-SA--LPAELGKLSKLGTLDLHSNQ 188 (507)
Q Consensus 160 ~l~~~~~-~~--l~~~l~~~~~L~~L~l~~~~ 188 (507)
..+++.- +. +.+--...++|+.+.+++|+
T Consensus 300 ~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~ 331 (483)
T KOG4341|consen 300 CYSSCTDITDEVLWALGQHCHNLQVLELSGCQ 331 (483)
T ss_pred cccCCCCCchHHHHHHhcCCCceEEEeccccc
Confidence 5555532 21 11112334555555555553
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.23 E-value=7.9e-07 Score=54.71 Aligned_cols=41 Identities=51% Similarity=0.852 Sum_probs=35.4
Q ss_pred CCCCeEeCCCCCCCCCCCcccCCCccCceEeccCCCCCCccH
Q 010567 445 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 486 (507)
Q Consensus 445 ~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~ 486 (507)
++|++|++++|+|+++++.+..+ ++|+.|++++|+|+++++
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l-~~L~~L~l~~N~i~~i~~ 41 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNL-PNLETLNLSNNPISDISP 41 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTC-TTSSEEEETSSCCSBEGG
T ss_pred CcceEEEccCCCCcccCchHhCC-CCCCEEEecCCCCCCCcC
Confidence 57999999999999999878776 999999999999998764
No 57
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.18 E-value=5.2e-06 Score=66.20 Aligned_cols=35 Identities=14% Similarity=0.405 Sum_probs=10.7
Q ss_pred hcCCCCCEEEccCCCCCCCCccccCCCCCceEEEcc
Q 010567 348 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 383 (507)
Q Consensus 348 ~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~ 383 (507)
..+.+|+.+.+.. .+..++..+|..+++|+.+.+.
T Consensus 9 ~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~ 43 (129)
T PF13306_consen 9 YNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFP 43 (129)
T ss_dssp TT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEES
T ss_pred hCCCCCCEEEECC-CeeEeChhhccccccccccccc
Confidence 3334444444432 2333333334444444444443
No 58
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.15 E-value=1.2e-06 Score=75.09 Aligned_cols=222 Identities=22% Similarity=0.254 Sum_probs=137.5
Q ss_pred ccccceEEecCCCCC-----CCChhhhcCCCccEEEcCCCccCc-----------CCccccCCCcCcEEecccCcccCCc
Q 010567 280 SVTSKELSLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQE-----------LPPELSSCASLQTLILSRNKIKDWP 343 (507)
Q Consensus 280 ~~~l~~l~l~~~~~~-----~~~~~~~~~~~L~~L~l~~~~~~~-----------i~~~~~~~~~L~~L~l~~~~l~~~~ 343 (507)
...++.++++++.+. .+...+..-.+|+..+++.--... +.+.+-+||+|+..++++|.+....
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 466788888888776 233334445677777776542111 2234567888999999988776432
Q ss_pred h----HHhhcCCCCCEEEccCCCCCCCCcccc-------------CCCCCceEEEccCcccCCCCCC----CCCCCCcCc
Q 010567 344 D----AILTSLSSLSCLKLDNNPLRQVPSDGF-------------KDIPMLQILDLSYNIASLPENP----PFSSLPHLQ 402 (507)
Q Consensus 344 ~----~~~~~~~~L~~L~l~~~~i~~~~~~~~-------------~~~~~L~~L~l~~~~~~~~~~~----~~~~~~~L~ 402 (507)
+ ..+.+-..|++|.+++|.+..+....+ .+-|.|+.+.+..|.+...... .+..=..|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 2 234556788889998887765443322 2457888888888865432211 112224788
Q ss_pred EEEcccccCc--ccc----cchhccCCCcEEEcCCCccc-----cccccccCCCCCCeEeCCCCCCCCCC-Ccc-----c
Q 010567 403 ELYLRRMQLR--EAP----TDILRLQQLRILDLSQNSLQ-----SIPEGFKNLTSLTELDLSDNNISALP-PEL-----G 465 (507)
Q Consensus 403 ~L~l~~~~i~--~l~----~~~~~~~~L~~L~l~~~~l~-----~l~~~~~~l~~L~~L~l~~~~l~~~~-~~~-----~ 465 (507)
.+.+.+|.|. ++. ..+..+.+|+.|++.+|.++ .+...+...+.|++|.+.+|-++.-. +.+ .
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e 268 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNE 268 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhh
Confidence 8888888887 221 23456788999999998776 23455667777899999999776211 111 1
Q ss_pred CCCccCceEeccCCCC-----CCccHHHHhhhHHHHHHHHH
Q 010567 466 LLEPSLQALRLDGNPL-----RSIRRTILDRGTKAVLKYLK 501 (507)
Q Consensus 466 ~~~~~L~~L~l~~n~~-----~~~~~~~~~~~~~~~~~~~~ 501 (507)
...|+|+.|-..+|.+ ..++-..|.....+.+..+.
T Consensus 269 ~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le 309 (388)
T COG5238 269 KFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLE 309 (388)
T ss_pred hcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHH
Confidence 1227888887777754 44445555555554444443
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.13 E-value=1.2e-05 Score=74.96 Aligned_cols=134 Identities=19% Similarity=0.208 Sum_probs=87.5
Q ss_pred ccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCC-CCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcC
Q 010567 323 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 401 (507)
Q Consensus 323 ~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~-i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 401 (507)
+..+.++++|++++|.++.++. -..+|++|.+++|. ++.++. .+ .++|+.|++++|..... -.++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~sLP~----LP~sLtsL~Lsnc~nLtsLP~-~L--P~nLe~L~Ls~Cs~L~s------LP~sL 114 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESLPV----LPNELTEITIENCNNLTTLPG-SI--PEGLEKLTVCHCPEISG------LPESV 114 (426)
T ss_pred HHHhcCCCEEEeCCCCCcccCC----CCCCCcEEEccCCCCcccCCc-hh--hhhhhheEccCcccccc------ccccc
Confidence 4456889999999998887762 13479999998854 333442 23 36899999998732221 23568
Q ss_pred cEEEcccccCc---ccccchhccCCCcEEEcCCCc-c--ccccccccCCCCCCeEeCCCCCCCCCCCcccCCCccCceEe
Q 010567 402 QELYLRRMQLR---EAPTDILRLQQLRILDLSQNS-L--QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 475 (507)
Q Consensus 402 ~~L~l~~~~i~---~l~~~~~~~~~L~~L~l~~~~-l--~~l~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~ 475 (507)
+.|+++.+... .+| ++|+.|.+.++. . ..+|..+ -++|++|++++|....+|+.+ +.+|+.|+
T Consensus 115 e~L~L~~n~~~~L~~LP------ssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i~LP~~L---P~SLk~L~ 183 (426)
T PRK15386 115 RSLEIKGSATDSIKNVP------NGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNIILPEKL---PESLQSIT 183 (426)
T ss_pred ceEEeCCCCCcccccCc------chHhheecccccccccccccccc--CCcccEEEecCCCcccCcccc---cccCcEEE
Confidence 88888776543 444 356777776543 1 1222111 168999999999876666543 36899999
Q ss_pred ccCCC
Q 010567 476 LDGNP 480 (507)
Q Consensus 476 l~~n~ 480 (507)
++.+.
T Consensus 184 ls~n~ 188 (426)
T PRK15386 184 LHIEQ 188 (426)
T ss_pred ecccc
Confidence 87763
No 60
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.11 E-value=1.4e-06 Score=88.21 Aligned_cols=104 Identities=18% Similarity=0.263 Sum_probs=52.8
Q ss_pred CCccEEEcCCCccCcC--Ccc-ccCCCcCcEEecccCcccCC-chHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceE
Q 010567 304 GEITKLDLSRNSIQEL--PPE-LSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 379 (507)
Q Consensus 304 ~~L~~L~l~~~~~~~i--~~~-~~~~~~L~~L~l~~~~l~~~-~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~ 379 (507)
.+|+.|++++...-.- |.. -..+|+|++|.+.+-.+... ......++|+|..||+++++++.+ .+++++++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4677777766432210 111 12466677777766554432 223345566777777777666655 33556666666
Q ss_pred EEccCcccCC-CCCCCCCCCCcCcEEEcccc
Q 010567 380 LDLSYNIASL-PENPPFSSLPHLQELYLRRM 409 (507)
Q Consensus 380 L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~ 409 (507)
|.+.+-.+.. .....+..+++|+.||+|..
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~ 230 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRD 230 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeecccc
Confidence 6665433322 11222334455555555544
No 61
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.09 E-value=5.9e-06 Score=67.72 Aligned_cols=100 Identities=26% Similarity=0.348 Sum_probs=43.9
Q ss_pred cEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCC-CCCCCCCCCcCcEEEccc
Q 010567 330 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP-ENPPFSSLPHLQELYLRR 408 (507)
Q Consensus 330 ~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~ 408 (507)
..+|+++|.+..++. |..++.|..|.+++|.|+.+.+.--..+++|..|.+.+|.+... ....+..||+|++|.+-+
T Consensus 45 d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~ 122 (233)
T KOG1644|consen 45 DAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLG 122 (233)
T ss_pred ceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecC
Confidence 344555554443322 34445555555555555554444333344455555555443222 112244445555555555
Q ss_pred ccCcccc----cchhccCCCcEEEcCC
Q 010567 409 MQLREAP----TDILRLQQLRILDLSQ 431 (507)
Q Consensus 409 ~~i~~l~----~~~~~~~~L~~L~l~~ 431 (507)
|.++.-. ..+..+|+|++||+..
T Consensus 123 Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 123 NPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred CchhcccCceeEEEEecCcceEeehhh
Confidence 5444111 1233444555555444
No 62
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=2.6e-06 Score=73.96 Aligned_cols=211 Identities=19% Similarity=0.183 Sum_probs=118.2
Q ss_pred CEEEcCCCcccccCc--ccc-CCCcccEEeCCCCCCC---CCchhhhcccCCCeEEcCCCcCccCCccc-cCCCCCcEEE
Q 010567 18 KSLDVSFNSIMKIPD--EIG-SATALVKFDCSSNQLK---ELPSSLGRCLNLSDFKASNNCITSLPEDL-ADCSKMSKLD 90 (507)
Q Consensus 18 ~~L~l~~~~i~~~~~--~~~-~~~~L~~L~l~~~~l~---~~~~~~~~~~~L~~L~l~~~~~~~l~~~~-~~~~~L~~L~ 90 (507)
..+.+.++.|+...+ .|+ .+++++.+++.+|.++ ++...+.+++.|+.|+++.|.+..--... ....+|++|-
T Consensus 48 ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lV 127 (418)
T KOG2982|consen 48 ELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLV 127 (418)
T ss_pred hhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEE
Confidence 355566666664322 232 5677888888888877 44556778888888888888766322223 2566788888
Q ss_pred cCCCcccc-cchhhhcCccccceeecCCccccccc---ccccCC-CcccEEeccCCccc---cCCCCCcCCCCCcEEEcC
Q 010567 91 VEGNKLTV-LSNNLIASWTMLTELIASKNLLNGMP---ETIGSL-SRLIRLDLHQNRIL---SIPSSISGCCSLAEFYMG 162 (507)
Q Consensus 91 l~~~~l~~-~~~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~-~~L~~L~l~~~~i~---~l~~~~~~~~~L~~L~l~ 162 (507)
+++..+.- -....+..+|.+++|.++.|....+. +..... +.++++...+|... .....-.-++++..+.+.
T Consensus 128 LNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~ 207 (418)
T KOG2982|consen 128 LNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVC 207 (418)
T ss_pred EcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeee
Confidence 88776652 22334667777777777777543211 111111 24555555555432 111112235677777777
Q ss_pred CCCCccC--CccccCCCCCCEEEcCCCcccccchh--hhc-cccCeEECCCCCCCCC-----C--ccccCCCCccEEE
Q 010567 163 NNALSAL--PAELGKLSKLGTLDLHSNQLKEYCVE--ACQ-LRLSVLDLSNNSLSGL-----P--PEIGKMTTLRKLL 228 (507)
Q Consensus 163 ~~~~~~l--~~~l~~~~~L~~L~l~~~~~~~~~~~--~~~-~~L~~l~l~~~~~~~~-----~--~~l~~l~~L~~L~ 228 (507)
.|.++.. .+....++.+..|+++.+++.+.... ... ..+..+.++.+.+.+- + -.++.+++++.|+
T Consensus 208 e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLN 285 (418)
T KOG2982|consen 208 EGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLN 285 (418)
T ss_pred cCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEec
Confidence 7766633 23345566666777777776643322 112 2266666666654441 0 1244555665554
No 63
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.03 E-value=2.7e-06 Score=86.18 Aligned_cols=128 Identities=17% Similarity=0.179 Sum_probs=70.4
Q ss_pred CcccEEeCCCCCCC--CCchhhh-cccCCCeEEcCCCcCc--cCCccccCCCCCcEEEcCCCcccccchhhhcCccccce
Q 010567 38 TALVKFDCSSNQLK--ELPSSLG-RCLNLSDFKASNNCIT--SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 112 (507)
Q Consensus 38 ~~L~~L~l~~~~l~--~~~~~~~-~~~~L~~L~l~~~~~~--~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~ 112 (507)
.+|++|+++|...- ..|..++ .+|.|++|.+++-.+. +..+...++++|..||+++++++.+.. ++.+++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~G--IS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLSG--ISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcHH--HhccccHHH
Confidence 45666666664322 3333333 3566666666665443 233344566666666776666666522 666666666
Q ss_pred eecCCccccccc--ccccCCCcccEEeccCCccccCC-------CCCcCCCCCcEEEcCCCCCc
Q 010567 113 LIASKNLLNGMP--ETIGSLSRLIRLDLHQNRILSIP-------SSISGCCSLAEFYMGNNALS 167 (507)
Q Consensus 113 L~l~~~~~~~~~--~~~~~~~~L~~L~l~~~~i~~l~-------~~~~~~~~L~~L~l~~~~~~ 167 (507)
|.+.+-.+..-. ..+.++++|+.||+|+......+ +--..+++|+.|+.+++.+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 666665554322 34556677777777655332111 11123667777777766555
No 64
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.02 E-value=1.8e-05 Score=63.11 Aligned_cols=120 Identities=18% Similarity=0.365 Sum_probs=59.7
Q ss_pred ccCCCcCcEEecccCcccCCchHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCc
Q 010567 323 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 402 (507)
Q Consensus 323 ~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 402 (507)
|.++.+|+.+.+.. .+..+....|..+++|+.+.+.++ +..++..+|.++++++.+.+.+ .+.......|..+++|+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 56677777777764 566666677777878888888774 7777777788887788888865 33333444566677777
Q ss_pred EEEcccccCcccccc-hhccCCCcEEEcCCCcccccc-ccccCCCCCC
Q 010567 403 ELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSIP-EGFKNLTSLT 448 (507)
Q Consensus 403 ~L~l~~~~i~~l~~~-~~~~~~L~~L~l~~~~l~~l~-~~~~~l~~L~ 448 (507)
.+++..+ +..++.. +.++ +++.+.+.+ .+..++ ..|.+|++|+
T Consensus 85 ~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 85 NIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp EEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred ccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 7777653 5544443 3333 677776665 444443 3456666553
No 65
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.20 E-value=2.5e-05 Score=67.45 Aligned_cols=79 Identities=22% Similarity=0.258 Sum_probs=44.3
Q ss_pred CCCeEEcCCCcCccCCccccCCCCCcEEEcCCCcccccchhhhcCccccceeecCCccccccc--ccccCCCcccEEecc
Q 010567 62 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP--ETIGSLSRLIRLDLH 139 (507)
Q Consensus 62 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~~~L~~L~l~ 139 (507)
+.+.|++=+|.+++| .....|+-|++|.|+-|+++.+.. +..|++|++|+|..|.|..+. ..+.++++|+.|++.
T Consensus 20 ~vkKLNcwg~~L~DI-sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI-SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HhhhhcccCCCccHH-HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 445555555555555 233455666666666666665554 566666666666666655443 234555666666665
Q ss_pred CCcc
Q 010567 140 QNRI 143 (507)
Q Consensus 140 ~~~i 143 (507)
.|+.
T Consensus 97 ENPC 100 (388)
T KOG2123|consen 97 ENPC 100 (388)
T ss_pred cCCc
Confidence 5543
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.97 E-value=0.00037 Score=60.05 Aligned_cols=114 Identities=17% Similarity=0.128 Sum_probs=79.5
Q ss_pred cCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCC--cCc-cCCccccCCCCCcEEEcCCCcccccch-hhhc
Q 010567 30 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN--CIT-SLPEDLADCSKMSKLDVEGNKLTVLSN-NLIA 105 (507)
Q Consensus 30 ~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~--~~~-~l~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~ 105 (507)
+......+..|+.+++.+..++++. .+..+++|++|.++.| ++. .++--...+++|+++++++|++..+.. ..+.
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~~-~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~ 113 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTLT-NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLK 113 (260)
T ss_pred cccccccccchhhhhhhccceeecc-cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhh
Confidence 4444456677888888888777653 3666789999999999 444 444445567999999999998874221 1166
Q ss_pred CccccceeecCCccccccc----ccccCCCcccEEeccCCccc
Q 010567 106 SWTMLTELIASKNLLNGMP----ETIGSLSRLIRLDLHQNRIL 144 (507)
Q Consensus 106 ~~~~L~~L~l~~~~~~~~~----~~~~~~~~L~~L~l~~~~i~ 144 (507)
.+.+|..|++.+|....+. ..+.-+++|++|+..+..-.
T Consensus 114 ~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~~~ 156 (260)
T KOG2739|consen 114 ELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVDGE 156 (260)
T ss_pred hhcchhhhhcccCCccccccHHHHHHHHhhhhccccccccCCc
Confidence 7778889999988775543 24566788888886655433
No 67
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.97 E-value=0.00044 Score=59.57 Aligned_cols=12 Identities=42% Similarity=0.509 Sum_probs=5.1
Q ss_pred CCCcEEEcCCCc
Q 010567 422 QQLRILDLSQNS 433 (507)
Q Consensus 422 ~~L~~L~l~~~~ 433 (507)
.+|..|++.+|.
T Consensus 116 ~nL~~Ldl~n~~ 127 (260)
T KOG2739|consen 116 ENLKSLDLFNCS 127 (260)
T ss_pred cchhhhhcccCC
Confidence 334444444443
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.97 E-value=3.9e-05 Score=66.25 Aligned_cols=79 Identities=27% Similarity=0.344 Sum_probs=39.1
Q ss_pred cCCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCC--ccccCCCCCcEEEc
Q 010567 14 LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP--EDLADCSKMSKLDV 91 (507)
Q Consensus 14 ~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~--~~~~~~~~L~~L~l 91 (507)
+.+.+.|++.||.+++|. ....++-|+.|.++-|+++++. .+.+|++|++|.|..|.|.++. ..+.++++|++|.|
T Consensus 18 l~~vkKLNcwg~~L~DIs-ic~kMp~lEVLsLSvNkIssL~-pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDIS-ICEKMPLLEVLSLSVNKISSLA-PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWL 95 (388)
T ss_pred HHHhhhhcccCCCccHHH-HHHhcccceeEEeeccccccch-hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhh
Confidence 344555555555555432 1334555555555555555542 2555555555555555555432 12344444444444
Q ss_pred CCC
Q 010567 92 EGN 94 (507)
Q Consensus 92 ~~~ 94 (507)
..|
T Consensus 96 ~EN 98 (388)
T KOG2123|consen 96 DEN 98 (388)
T ss_pred ccC
Confidence 443
No 69
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.46 E-value=0.00048 Score=68.81 Aligned_cols=108 Identities=28% Similarity=0.249 Sum_probs=65.9
Q ss_pred ccccceEEecCCC-CCC--CChhhhcCCCccEEEcCCC-c-cCcC----CccccCCCcCcEEecccCc-ccCCchHHhh-
Q 010567 280 SVTSKELSLEGMN-LSA--IPSEIWEAGEITKLDLSRN-S-IQEL----PPELSSCASLQTLILSRNK-IKDWPDAILT- 348 (507)
Q Consensus 280 ~~~l~~l~l~~~~-~~~--~~~~~~~~~~L~~L~l~~~-~-~~~i----~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~- 348 (507)
...++.+.+.++. +.. +......++.|++|+++++ . .... ......+.+|+.++++.+. +++.....+.
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 5666777776663 222 3345566788888888863 1 1111 1123456788888888886 6655444333
Q ss_pred cCCCCCEEEccCCC-CCCCCccc-cCCCCCceEEEccCccc
Q 010567 349 SLSSLSCLKLDNNP-LRQVPSDG-FKDIPMLQILDLSYNIA 387 (507)
Q Consensus 349 ~~~~L~~L~l~~~~-i~~~~~~~-~~~~~~L~~L~l~~~~~ 387 (507)
.|++|+.|.+.+|. ++...... ...++.|++|+++.|..
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 37888888877775 44333221 35677888888887643
No 70
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.10 E-value=0.003 Score=32.08 Aligned_cols=19 Identities=58% Similarity=0.838 Sum_probs=9.8
Q ss_pred CcEEEcCCCcccccccccc
Q 010567 424 LRILDLSQNSLQSIPEGFK 442 (507)
Q Consensus 424 L~~L~l~~~~l~~l~~~~~ 442 (507)
|++|++++|.++.+|..++
T Consensus 2 L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp ESEEEETSSEESEEGTTTT
T ss_pred ccEEECCCCcCEeCChhhc
Confidence 4555555555555554443
No 71
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.47 E-value=0.01 Score=27.84 Aligned_cols=14 Identities=64% Similarity=0.864 Sum_probs=4.7
Q ss_pred CcEEEcCCCccccc
Q 010567 424 LRILDLSQNSLQSI 437 (507)
Q Consensus 424 L~~L~l~~~~l~~l 437 (507)
|++|++++|+++++
T Consensus 3 L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 3 LRTLDLSNNRLTSL 16 (17)
T ss_dssp -SEEEETSS--SSE
T ss_pred cCEEECCCCCCCCC
Confidence 44444444444433
No 72
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.44 E-value=0.0035 Score=62.66 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=15.7
Q ss_pred CCCccEEEcCCCc-cCc--CCccccCCCcCcEEeccc
Q 010567 303 AGEITKLDLSRNS-IQE--LPPELSSCASLQTLILSR 336 (507)
Q Consensus 303 ~~~L~~L~l~~~~-~~~--i~~~~~~~~~L~~L~l~~ 336 (507)
.+.++.+.+.++. +.+ +-+....++.|+.|++++
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 223 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSG 223 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccC
Confidence 3455555555542 222 222334455555555554
No 73
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.36 E-value=0.0083 Score=30.43 Aligned_cols=18 Identities=39% Similarity=0.576 Sum_probs=9.4
Q ss_pred CCEEEcCCCcccccCccc
Q 010567 17 LKSLDVSFNSIMKIPDEI 34 (507)
Q Consensus 17 L~~L~l~~~~i~~~~~~~ 34 (507)
|++||+++|.++.+|..|
T Consensus 2 L~~Ldls~n~l~~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSF 19 (22)
T ss_dssp ESEEEETSSEESEEGTTT
T ss_pred ccEEECCCCcCEeCChhh
Confidence 455555555555554443
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.11 E-value=0.0099 Score=27.90 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=6.1
Q ss_pred cCceEeccCCCCCCc
Q 010567 470 SLQALRLDGNPLRSI 484 (507)
Q Consensus 470 ~L~~L~l~~n~~~~~ 484 (507)
+|+.|++++|+++++
T Consensus 2 ~L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSL 16 (17)
T ss_dssp T-SEEEETSS--SSE
T ss_pred ccCEEECCCCCCCCC
Confidence 455555555555443
No 75
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.99 E-value=0.023 Score=30.23 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=16.8
Q ss_pred ccCceEeccCCCCCCccHHHHh
Q 010567 469 PSLQALRLDGNPLRSIRRTILD 490 (507)
Q Consensus 469 ~~L~~L~l~~n~~~~~~~~~~~ 490 (507)
++|+.|++++|+++.+++.+|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 5677788888888888777775
No 76
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.99 E-value=0.023 Score=30.23 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=16.8
Q ss_pred ccCceEeccCCCCCCccHHHHh
Q 010567 469 PSLQALRLDGNPLRSIRRTILD 490 (507)
Q Consensus 469 ~~L~~L~l~~n~~~~~~~~~~~ 490 (507)
++|+.|++++|+++.+++.+|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 5677788888888888777775
No 77
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=94.97 E-value=0.0012 Score=55.83 Aligned_cols=90 Identities=19% Similarity=0.228 Sum_probs=71.2
Q ss_pred HHhhcccCCCCEEEcCCCcccccCccccCCCcccEEeCCCCCCCCCchhhhcccCCCeEEcCCCcCccCCccccCCCCCc
Q 010567 8 LYVFDRLHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 87 (507)
Q Consensus 8 ~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~ 87 (507)
...++.++..+.||++.+....+...|+-++.+..++++.+.+.-+|..+.....++.++..+|+....|.++...++++
T Consensus 35 v~ei~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k 114 (326)
T KOG0473|consen 35 VREIASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPK 114 (326)
T ss_pred hhhhhccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcc
Confidence 45667778888888888877766666777788888888888888888888888888888888888888888888888888
Q ss_pred EEEcCCCccc
Q 010567 88 KLDVEGNKLT 97 (507)
Q Consensus 88 ~L~l~~~~l~ 97 (507)
.++.-++.+.
T Consensus 115 ~~e~k~~~~~ 124 (326)
T KOG0473|consen 115 KNEQKKTEFF 124 (326)
T ss_pred hhhhccCcch
Confidence 8887776654
No 78
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.25 E-value=0.0045 Score=51.35 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=42.3
Q ss_pred CCCEEEccCCCCCCCCccccCCCCCceEEEccCccc-CCCCCCCC-CCCCcCcEEEcccc-cCc-ccccchhccCCCcEE
Q 010567 352 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA-SLPENPPF-SSLPHLQELYLRRM-QLR-EAPTDILRLQQLRIL 427 (507)
Q Consensus 352 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~-~~~~~~~~-~~~~~L~~L~l~~~-~i~-~l~~~~~~~~~L~~L 427 (507)
.++.++.+++.|...+.+.+.+++.++.|.+.+|.- .+....-+ ...++|+.|++++| +|+ .....+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 344555555555544444455555555555555421 11100001 13467777777776 566 334556667777777
Q ss_pred EcCCC
Q 010567 428 DLSQN 432 (507)
Q Consensus 428 ~l~~~ 432 (507)
.+.+=
T Consensus 182 ~l~~l 186 (221)
T KOG3864|consen 182 HLYDL 186 (221)
T ss_pred HhcCc
Confidence 76663
No 79
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.16 E-value=0.043 Score=29.11 Aligned_cols=22 Identities=55% Similarity=0.789 Sum_probs=15.5
Q ss_pred CCCCCeEeCCCCCCCCCCCccc
Q 010567 444 LTSLTELDLSDNNISALPPELG 465 (507)
Q Consensus 444 l~~L~~L~l~~~~l~~~~~~~~ 465 (507)
+++|++|++++|+++.+|+..+
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 4567777777777777776544
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.16 E-value=0.043 Score=29.11 Aligned_cols=22 Identities=55% Similarity=0.789 Sum_probs=15.5
Q ss_pred CCCCCeEeCCCCCCCCCCCccc
Q 010567 444 LTSLTELDLSDNNISALPPELG 465 (507)
Q Consensus 444 l~~L~~L~l~~~~l~~~~~~~~ 465 (507)
+++|++|++++|+++.+|+..+
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 4567777777777777776544
No 81
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.04 E-value=0.00085 Score=65.37 Aligned_cols=175 Identities=22% Similarity=0.260 Sum_probs=99.0
Q ss_pred CCEEEcCCCccc-----ccCccccCCCcccEEeCCCCCCCC-----Cchhhhcc-cCCCeEEcCCCcCc-----cCCccc
Q 010567 17 LKSLDVSFNSIM-----KIPDEIGSATALVKFDCSSNQLKE-----LPSSLGRC-LNLSDFKASNNCIT-----SLPEDL 80 (507)
Q Consensus 17 L~~L~l~~~~i~-----~~~~~~~~~~~L~~L~l~~~~l~~-----~~~~~~~~-~~L~~L~l~~~~~~-----~l~~~~ 80 (507)
+..+.+.+|.+. .+..++....+|+.|++++|.+.. +-..+... ..+++|++..|.++ .+.+.+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 566666666654 234455566777777777776651 11122222 34556666666655 234445
Q ss_pred cCCCCCcEEEcCCCcccc----cchhhhc----CccccceeecCCccccc-----ccccccCCCc-ccEEeccCCccc--
Q 010567 81 ADCSKMSKLDVEGNKLTV----LSNNLIA----SWTMLTELIASKNLLNG-----MPETIGSLSR-LIRLDLHQNRIL-- 144 (507)
Q Consensus 81 ~~~~~L~~L~l~~~~l~~----~~~~~~~----~~~~L~~L~l~~~~~~~-----~~~~~~~~~~-L~~L~l~~~~i~-- 144 (507)
.....++.++++.|.+.. .....+. ...++++|.+.++.++. +...+...+. +..+++..|.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 556677777777666531 1111122 35667777777766542 1223344444 555677666554
Q ss_pred ---cCCCCCcCC-CCCcEEEcCCCCCc-----cCCccccCCCCCCEEEcCCCcccc
Q 010567 145 ---SIPSSISGC-CSLAEFYMGNNALS-----ALPAELGKLSKLGTLDLHSNQLKE 191 (507)
Q Consensus 145 ---~l~~~~~~~-~~L~~L~l~~~~~~-----~l~~~l~~~~~L~~L~l~~~~~~~ 191 (507)
.+...+..+ ..++++++..|.++ .+++.+..+..++.+.++.+.+.+
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 222333444 56677888877776 334556666788888888887764
No 82
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.05 E-value=0.00049 Score=67.04 Aligned_cols=174 Identities=28% Similarity=0.298 Sum_probs=118.2
Q ss_pred ccEEeCCCCCCC-----CCchhhhcccCCCeEEcCCCcCcc-----CCccccCC-CCCcEEEcCCCcccccc----hhhh
Q 010567 40 LVKFDCSSNQLK-----ELPSSLGRCLNLSDFKASNNCITS-----LPEDLADC-SKMSKLDVEGNKLTVLS----NNLI 104 (507)
Q Consensus 40 L~~L~l~~~~l~-----~~~~~~~~~~~L~~L~l~~~~~~~-----l~~~~~~~-~~L~~L~l~~~~l~~~~----~~~~ 104 (507)
+..+.+..|.+. .+...+.....|+.|++++|.++. +...+... ..++.|.+..|.++... ...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 788888888776 345577888999999999998872 22334444 67888888888777322 2335
Q ss_pred cCccccceeecCCccccc-----cccccc----CCCcccEEeccCCccc-----cCCCCCcCCCC-CcEEEcCCCCCcc-
Q 010567 105 ASWTMLTELIASKNLLNG-----MPETIG----SLSRLIRLDLHQNRIL-----SIPSSISGCCS-LAEFYMGNNALSA- 168 (507)
Q Consensus 105 ~~~~~L~~L~l~~~~~~~-----~~~~~~----~~~~L~~L~l~~~~i~-----~l~~~~~~~~~-L~~L~l~~~~~~~- 168 (507)
.....++.++++.|.+.. ++..+. ...++++|.+++|.++ .+...+...+. +..+++..|.+..
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 568889999999887732 223333 5788999999998876 12223444455 6668888887662
Q ss_pred ----CCccccCC-CCCCEEEcCCCcccc-----cchhhhcc-ccCeEECCCCCCCC
Q 010567 169 ----LPAELGKL-SKLGTLDLHSNQLKE-----YCVEACQL-RLSVLDLSNNSLSG 213 (507)
Q Consensus 169 ----l~~~l~~~-~~L~~L~l~~~~~~~-----~~~~~~~~-~L~~l~l~~~~~~~ 213 (507)
+...+... ..+++++++.|.+++ +....... .++++.++.|.+.+
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 23334444 678999999998874 22222222 38888898888776
No 83
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.75 E-value=0.01 Score=49.30 Aligned_cols=81 Identities=19% Similarity=0.080 Sum_probs=43.6
Q ss_pred CCceEEEccCcccCCCCCCCCCCCCcCcEEEccccc-Cc--ccccchhccCCCcEEEcCCC-ccccc-cccccCCCCCCe
Q 010567 375 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ-LR--EAPTDILRLQQLRILDLSQN-SLQSI-PEGFKNLTSLTE 449 (507)
Q Consensus 375 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~-i~--~l~~~~~~~~~L~~L~l~~~-~l~~l-~~~~~~l~~L~~ 449 (507)
..++.++-+++.+...+...+..+++++.|.+.+|. +. .+...-...++|+.|++++| .|++- -.++..+++|+.
T Consensus 101 ~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred ceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 345566666666655555556666666666666662 22 11111113456666666666 35522 144556666666
Q ss_pred EeCCCC
Q 010567 450 LDLSDN 455 (507)
Q Consensus 450 L~l~~~ 455 (507)
|.+.+-
T Consensus 181 L~l~~l 186 (221)
T KOG3864|consen 181 LHLYDL 186 (221)
T ss_pred HHhcCc
Confidence 666554
No 84
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=90.83 E-value=0.0069 Score=51.35 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=46.0
Q ss_pred cCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccCCCcEEEcCCCccccccccccCCCCCCeE
Q 010567 371 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 450 (507)
Q Consensus 371 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~l~~~~~~l~~L~~L 450 (507)
+......+.||++.|.+... ...+..++.+..++++.+.+..+|.++.....+.+++...|..+..|.++...+.++++
T Consensus 38 i~~~kr~tvld~~s~r~vn~-~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVNL-GKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKN 116 (326)
T ss_pred hhccceeeeehhhhhHHHhh-ccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchh
Confidence 44455555556555543221 12233445555556665555555555555555555555555555555555555566655
Q ss_pred eCCCCCC
Q 010567 451 DLSDNNI 457 (507)
Q Consensus 451 ~l~~~~l 457 (507)
+..++.+
T Consensus 117 e~k~~~~ 123 (326)
T KOG0473|consen 117 EQKKTEF 123 (326)
T ss_pred hhccCcc
Confidence 5555543
No 85
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=87.93 E-value=0.24 Score=25.55 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=10.2
Q ss_pred ccCceEeccCCCCCCccH
Q 010567 469 PSLQALRLDGNPLRSIRR 486 (507)
Q Consensus 469 ~~L~~L~l~~n~~~~~~~ 486 (507)
++|+.|+|++|+|+....
T Consensus 2 ~~L~~L~l~~n~i~~~g~ 19 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGA 19 (24)
T ss_dssp TT-SEEE-TSSBEHHHHH
T ss_pred CCCCEEEccCCcCCHHHH
Confidence 667777777777654433
No 86
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=86.38 E-value=0.49 Score=24.93 Aligned_cols=17 Identities=47% Similarity=0.770 Sum_probs=8.7
Q ss_pred CCcEEEcCCCccccccc
Q 010567 423 QLRILDLSQNSLQSIPE 439 (507)
Q Consensus 423 ~L~~L~l~~~~l~~l~~ 439 (507)
+|+.|++++|+++++|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 44555555555555543
No 87
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=79.51 E-value=1.6 Score=23.06 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=9.9
Q ss_pred ccCceEeccCCCCCCc
Q 010567 469 PSLQALRLDGNPLRSI 484 (507)
Q Consensus 469 ~~L~~L~l~~n~~~~~ 484 (507)
.+|+.|++++|.|+.|
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 4566666666666554
No 88
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=69.96 E-value=3.9 Score=40.05 Aligned_cols=63 Identities=27% Similarity=0.252 Sum_probs=41.6
Q ss_pred CCCCcCcEEEcccccCccc---ccchhccCCCcEEEcCCC--ccccccccc-cCCCCCCeEeCCCCCCC
Q 010567 396 SSLPHLQELYLRRMQLREA---PTDILRLQQLRILDLSQN--SLQSIPEGF-KNLTSLTELDLSDNNIS 458 (507)
Q Consensus 396 ~~~~~L~~L~l~~~~i~~l---~~~~~~~~~L~~L~l~~~--~l~~l~~~~-~~l~~L~~L~l~~~~l~ 458 (507)
.+.|.+..+.+++|++..+ .......|+|++|+|++| .+.+.++.- -+...|++|.+.||++.
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 4567788888888877643 333445788888888888 444332221 13456888888888775
No 89
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=67.96 E-value=4.1 Score=21.35 Aligned_cols=11 Identities=55% Similarity=0.655 Sum_probs=5.3
Q ss_pred CCCCeEeCCCC
Q 010567 445 TSLTELDLSDN 455 (507)
Q Consensus 445 ~~L~~L~l~~~ 455 (507)
++|++|++++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 44444444444
No 90
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=65.84 E-value=6.4 Score=21.15 Aligned_cols=15 Identities=47% Similarity=0.680 Sum_probs=9.5
Q ss_pred ccCceEeccCCCCCC
Q 010567 469 PSLQALRLDGNPLRS 483 (507)
Q Consensus 469 ~~L~~L~l~~n~~~~ 483 (507)
++|+.|+|++|.+..
T Consensus 2 ~~L~~LdL~~N~i~~ 16 (28)
T smart00368 2 PSLRELDLSNNKLGD 16 (28)
T ss_pred CccCEEECCCCCCCH
Confidence 456666666666654
No 91
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=62.98 E-value=41 Score=32.69 Aligned_cols=58 Identities=26% Similarity=0.201 Sum_probs=28.7
Q ss_pred cccceeecCCcccc-cccccc---cCCCcccEEeccCCccc--cCCC--CCcCCCCCcEEEcCCCC
Q 010567 108 TMLTELIASKNLLN-GMPETI---GSLSRLIRLDLHQNRIL--SIPS--SISGCCSLAEFYMGNNA 165 (507)
Q Consensus 108 ~~L~~L~l~~~~~~-~~~~~~---~~~~~L~~L~l~~~~i~--~l~~--~~~~~~~L~~L~l~~~~ 165 (507)
.++.+++++.+... .+|..+ ..-..+++++.+...+. .+.. ..+.-++++..+++.+.
T Consensus 214 ~~lteldls~n~~Kddip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng 279 (553)
T KOG4242|consen 214 LWLTELDLSTNGGKDDIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNG 279 (553)
T ss_pred ccccccccccCCCCccchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCC
Confidence 45667777766652 344322 22234566666655544 1111 23334566666666554
No 92
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=53.34 E-value=7.9 Score=38.06 Aligned_cols=64 Identities=23% Similarity=0.173 Sum_probs=42.3
Q ss_pred CCCCCceEEEccCcccCCCCCC--CCCCCCcCcEEEcccc--cCcccccc-hhccCCCcEEEcCCCccc
Q 010567 372 KDIPMLQILDLSYNIASLPENP--PFSSLPHLQELYLRRM--QLREAPTD-ILRLQQLRILDLSQNSLQ 435 (507)
Q Consensus 372 ~~~~~L~~L~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~--~i~~l~~~-~~~~~~L~~L~l~~~~l~ 435 (507)
.+.+.+..+.+++|.+...... .-...|+|+.|+|++| .+...++. -.+...|++|-+.+|.+.
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 4567788888988876544221 1245689999999999 44432221 123467899999999875
No 93
>PRK09718 hypothetical protein; Validated
Probab=21.53 E-value=2.6e+02 Score=27.62 Aligned_cols=172 Identities=10% Similarity=0.118 Sum_probs=0.0
Q ss_pred cccccchhhhhhhhhccccccceEEecCCCCCCCChhhhcCCCccEEEcCCCccCcCCccccCCCcCcEEecccCcccCC
Q 010567 263 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 342 (507)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~i~~~~~~~~~L~~L~l~~~~l~~~ 342 (507)
......++-...........+..+.+.+|.+... .+...++.++.+.+. .| ....+...++.++.+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~edfs~ldFegCdFsgC--------dFS~csFs~~dLqDV--~F-EcA~Lg~CNFsgAdLsgA 140 (512)
T PRK09718 72 EKIECACDFLMDKDAQGYIDLSDLDLTSCHFKGD--------VISKVSFLSSNLQHV--TF-ECKEIGDCNFTTAIVDNV 140 (512)
T ss_pred ccceeehhhhcccccccCceeccCEEcccEecCC--------EEeeceecCCEEEeE--EE-eccccCccccccCCCCCC
Q ss_pred chHHhhcCCCCCEEEccCCCCCCCCccccCCCCCceEEEccCcccCCCCCCCCCCCCcCcEEEcccccCcccccchhccC
Q 010567 343 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 422 (507)
Q Consensus 343 ~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~ 422 (507)
.... ..+....+.+|.+.+..-. -..|+...+.+|.+....-..-. |+...+.+|.+.+....-..+.
T Consensus 141 ~Far----A~L~rvsFinCKLsGAdFS----gA~Lk~V~FsdCnL~yAnFsgAn----LskA~F~gCDLseAdFSEcdLS 208 (512)
T PRK09718 141 IFKC----RRLHNVIFIKASGEYVDFS----KNILDTVDFSQSQLTHSNFRECQ----IRNSNFDNCYLYASHFTRAEFL 208 (512)
T ss_pred cccc----ceecceEEEeccccCcccc----cCccCCcEEeeeEecccCCCCCc----CCCCEEeCccCCcCCccCCccC
Q ss_pred CCcEEEcCCCccccccccccCCCCCCeEeCCCCCCCCC
Q 010567 423 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 460 (507)
Q Consensus 423 ~L~~L~l~~~~l~~l~~~~~~l~~L~~L~l~~~~l~~~ 460 (507)
.++...+.+|.+... .|.+ +.|+.+|++.|.+..+
T Consensus 209 ~aKka~F~~cDLt~A--dF~q-T~LkgVDFSdC~Le~~ 243 (512)
T PRK09718 209 SAKEISFIKSNLTAV--MFDH-VRISTGNFKDCITEQL 243 (512)
T ss_pred CCCCCEEeCCCCCCC--CcCC-CcCCCcccccccccce
Done!