Query 010568
Match_columns 507
No_of_seqs 175 out of 1551
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:36:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g7s_A Long-chain-fatty-acid-- 100.0 1.7E-59 5.6E-64 490.8 42.1 404 35-507 10-429 (549)
2 1v25_A Long-chain-fatty-acid-C 100.0 2.5E-59 8.6E-64 488.3 42.6 395 43-507 17-425 (541)
3 3rix_A Luciferase, luciferin 4 100.0 1E-59 3.6E-64 492.4 39.7 407 37-507 13-429 (550)
4 3ni2_A 4-coumarate:COA ligase; 100.0 1.4E-59 4.7E-64 489.9 37.1 412 22-507 4-424 (536)
5 3o83_A Peptide arylation enzym 100.0 5.4E-59 1.8E-63 486.1 39.6 391 43-507 29-429 (544)
6 3etc_A AMP-binding protein; ad 100.0 2.8E-58 9.7E-63 483.3 41.4 397 41-507 53-465 (580)
7 3r44_A Fatty acyl COA syntheta 100.0 1.1E-58 3.6E-63 480.9 37.6 391 38-507 10-403 (517)
8 1mdb_A 2,3-dihydroxybenzoate-A 100.0 1.7E-58 5.7E-63 481.9 36.1 387 43-507 24-420 (539)
9 2d1s_A Luciferase, luciferin 4 100.0 7.4E-58 2.5E-62 477.7 39.7 412 23-507 8-431 (548)
10 1t5h_X 4-chlorobenzoyl COA lig 100.0 1.9E-57 6.5E-62 470.4 40.6 379 43-507 1-392 (504)
11 3ivr_A Putative long-chain-fat 100.0 1.5E-57 5.2E-62 471.9 38.6 382 42-507 4-388 (509)
12 3c5e_A Acyl-coenzyme A synthet 100.0 8.8E-57 3E-61 471.3 42.5 394 41-507 35-446 (570)
13 3t5a_A Long-chain-fatty-acid-- 100.0 1E-57 3.4E-62 470.3 34.5 390 42-505 22-471 (480)
14 1pg4_A Acetyl-COA synthetase; 100.0 4.8E-57 1.6E-61 480.4 38.2 406 43-507 75-507 (652)
15 4gr5_A Non-ribosomal peptide s 100.0 4.2E-57 1.4E-61 474.5 36.3 373 39-507 70-459 (570)
16 2v7b_A Benzoate-coenzyme A lig 100.0 7.8E-57 2.7E-61 468.8 36.8 393 41-507 21-419 (529)
17 4fuq_A Malonyl COA synthetase; 100.0 5.3E-57 1.8E-61 466.6 34.8 382 48-507 4-389 (503)
18 1ry2_A Acetyl-coenzyme A synth 100.0 1.5E-56 5.3E-61 476.7 38.1 408 43-507 81-516 (663)
19 1amu_A GRSA, gramicidin synthe 100.0 3.2E-56 1.1E-60 466.3 36.2 377 35-507 30-420 (563)
20 3rg2_A Enterobactin synthase c 100.0 6.3E-56 2.1E-60 469.7 38.7 391 41-507 24-424 (617)
21 4dg8_A PA1221; ANL superfamily 100.0 5.4E-56 1.9E-60 468.6 36.7 370 41-507 24-409 (620)
22 3tsy_A Fusion protein 4-coumar 100.0 4.6E-56 1.6E-60 494.3 37.4 422 18-507 39-471 (979)
23 3e7w_A D-alanine--poly(phospho 100.0 1.2E-55 4E-60 457.8 36.3 373 44-506 1-388 (511)
24 3fce_A D-alanine--poly(phospho 100.0 7E-56 2.4E-60 459.7 31.9 373 44-505 1-388 (512)
25 3l8c_A D-alanine--poly(phospho 100.0 1.4E-55 4.9E-60 458.5 33.8 375 43-507 3-393 (521)
26 3kxw_A Saframycin MX1 syntheta 100.0 6.5E-55 2.2E-59 460.7 35.6 390 41-506 8-448 (590)
27 3gqw_A Fatty acid AMP ligase; 100.0 1.4E-54 4.6E-59 457.1 36.7 394 33-505 10-450 (576)
28 3ite_A SIDN siderophore synthe 100.0 2.6E-54 9E-59 453.0 36.6 391 39-507 15-417 (562)
29 3ipl_A 2-succinylbenzoate--COA 100.0 2.9E-55 9.8E-60 454.0 28.3 383 45-507 2-388 (501)
30 3nyq_A Malonyl-COA ligase; A/B 100.0 2.5E-55 8.4E-60 454.1 27.3 371 41-507 19-395 (505)
31 2vsq_A Surfactin synthetase su 100.0 2.2E-52 7.4E-57 476.2 39.1 373 43-507 463-851 (1304)
32 4gs5_A Acyl-COA synthetase (AM 100.0 3.5E-32 1.2E-36 267.8 16.0 205 221-507 36-241 (358)
33 3qov_A Phenylacetate-coenzyme 100.0 1.5E-30 5E-35 264.0 22.2 244 199-507 65-312 (436)
34 2y27_A Phenylacetate-coenzyme 100.0 8.1E-30 2.8E-34 258.7 24.3 242 199-506 70-316 (437)
35 2y4o_A Phenylacetate-coenzyme 100.0 1.3E-29 4.4E-34 257.7 23.3 243 199-507 72-319 (443)
36 3hgu_A EHPF; phenazine, antibi 100.0 6.1E-29 2.1E-33 246.5 17.6 226 219-500 88-349 (369)
37 4eql_A 4-substituted benzoates 95.6 0.19 6.7E-06 51.2 14.7 55 196-250 65-122 (581)
38 4b2g_A GH3-1 auxin conjugating 95.6 0.28 9.5E-06 50.2 15.5 54 196-249 71-127 (609)
39 4epl_A Jasmonic acid-amido syn 93.2 1.1 3.8E-05 45.6 13.5 55 195-249 69-126 (581)
40 2y27_A Phenylacetate-coenzyme 92.7 0.85 2.9E-05 45.0 12.0 125 57-184 88-221 (437)
41 2y4o_A Phenylacetate-coenzyme 92.3 1.1 3.7E-05 44.3 12.0 125 57-184 90-223 (443)
42 3qov_A Phenylacetate-coenzyme 90.5 1.1 3.8E-05 44.1 10.0 123 59-184 86-217 (436)
43 3ipl_A 2-succinylbenzoate--COA 87.9 6.7 0.00023 39.2 13.7 122 57-184 161-285 (501)
44 3hgu_A EHPF; phenazine, antibi 85.1 3.1 0.00011 39.7 9.1 104 57-164 89-219 (369)
45 1mdb_A 2,3-dihydroxybenzoate-A 79.8 31 0.0011 34.7 14.6 122 57-184 180-309 (539)
46 3fce_A D-alanine--poly(phospho 78.2 16 0.00054 36.5 11.7 123 57-184 142-272 (512)
47 4gs5_A Acyl-COA synthetase (AM 77.6 10 0.00036 35.9 9.7 119 57-183 35-158 (358)
48 3r44_A Fatty acyl COA syntheta 77.3 15 0.00051 36.8 11.2 120 58-184 169-295 (517)
49 4dg8_A PA1221; ANL superfamily 77.3 13 0.00045 38.3 11.0 123 57-185 162-288 (620)
50 2d1s_A Luciferase, luciferin 4 77.0 12 0.00042 37.8 10.6 122 59-184 192-320 (548)
51 3ivr_A Putative long-chain-fat 75.7 29 0.00098 34.5 12.8 120 57-182 158-281 (509)
52 3e7w_A D-alanine--poly(phospho 75.6 27 0.00091 34.8 12.6 123 57-184 141-271 (511)
53 4gr5_A Non-ribosomal peptide s 74.7 10 0.00034 38.7 9.2 123 57-185 212-338 (570)
54 3o83_A Peptide arylation enzym 73.4 23 0.0008 35.6 11.5 122 57-184 189-318 (544)
55 3g7s_A Long-chain-fatty-acid-- 70.2 42 0.0014 33.7 12.6 107 220-330 32-140 (549)
56 3kxw_A Saframycin MX1 syntheta 69.0 35 0.0012 34.7 11.8 123 57-184 165-300 (590)
57 3ni2_A 4-coumarate:COA ligase; 68.4 36 0.0012 34.1 11.6 101 220-330 35-137 (536)
58 3rix_A Luciferase, luciferin 4 67.9 17 0.00058 36.7 9.1 123 59-184 190-318 (550)
59 1v25_A Long-chain-fatty-acid-C 67.0 53 0.0018 32.9 12.5 100 221-328 32-133 (541)
60 3rg2_A Enterobactin synthase c 66.2 1E+02 0.0036 31.3 14.8 122 58-185 183-314 (617)
61 3tbh_A O-acetyl serine sulfhyd 64.1 31 0.0011 32.3 9.4 65 95-159 62-127 (334)
62 1pg4_A Acetyl-COA synthetase; 64.0 35 0.0012 35.3 10.7 124 58-185 255-390 (652)
63 1ry2_A Acetyl-coenzyme A synth 63.2 54 0.0019 33.9 12.0 100 220-324 95-196 (663)
64 3nyq_A Malonyl-COA ligase; A/B 62.7 49 0.0017 32.9 11.2 103 57-166 153-259 (505)
65 3t5a_A Long-chain-fatty-acid-- 62.6 73 0.0025 31.1 12.5 107 220-330 37-148 (480)
66 1t5h_X 4-chlorobenzoyl COA lig 62.2 59 0.002 32.2 11.7 99 220-328 15-117 (504)
67 3c5e_A Acyl-coenzyme A synthet 61.8 70 0.0024 32.3 12.3 102 220-328 56-160 (570)
68 1amu_A GRSA, gramicidin synthe 61.2 63 0.0022 32.6 11.8 95 220-326 52-148 (563)
69 3ezx_A MMCP 1, monomethylamine 58.5 61 0.0021 28.0 9.6 53 268-320 93-149 (215)
70 3etc_A AMP-binding protein; ad 57.9 56 0.0019 33.2 10.8 97 220-323 69-167 (580)
71 4fuq_A Malonyl COA synthetase; 54.2 76 0.0026 31.4 10.9 86 240-328 27-114 (503)
72 3vc3_A Beta-cyanoalnine syntha 53.5 61 0.0021 30.4 9.4 64 96-159 78-142 (344)
73 2v7b_A Benzoate-coenzyme A lig 52.9 51 0.0017 32.9 9.4 87 240-329 47-135 (529)
74 3ist_A Glutamate racemase; str 49.4 51 0.0017 29.7 7.8 63 48-117 19-81 (269)
75 2vsq_A Surfactin synthetase su 48.9 43 0.0015 38.0 8.8 123 57-185 605-732 (1304)
76 3ite_A SIDN siderophore synthe 47.3 70 0.0024 32.1 9.5 123 59-184 175-305 (562)
77 4eez_A Alcohol dehydrogenase 1 45.3 88 0.003 29.0 9.2 77 79-158 137-216 (348)
78 3l8c_A D-alanine--poly(phospho 45.1 1E+02 0.0034 30.5 10.2 81 240-323 28-110 (521)
79 3tsy_A Fusion protein 4-coumar 44.6 1.1E+02 0.0036 33.4 10.9 99 220-328 74-174 (979)
80 4aec_A Cysteine synthase, mito 44.0 1E+02 0.0034 30.0 9.4 63 96-158 166-229 (430)
81 1z7w_A Cysteine synthase; tran 43.3 1.1E+02 0.0038 28.2 9.4 64 96-159 58-122 (322)
82 2q3b_A Cysteine synthase A; py 40.2 1.4E+02 0.0048 27.3 9.6 64 95-159 58-122 (313)
83 3tqh_A Quinone oxidoreductase; 40.1 88 0.003 28.7 8.2 75 79-158 126-204 (321)
84 3ju7_A Putative PLP-dependent 39.3 69 0.0024 30.3 7.5 60 94-156 69-135 (377)
85 3gqw_A Fatty acid AMP ligase; 37.4 1.5E+02 0.0052 29.5 10.2 87 239-328 47-142 (576)
86 2egu_A Cysteine synthase; O-ac 36.7 1.5E+02 0.0053 26.9 9.2 64 95-159 56-120 (308)
87 3s2e_A Zinc-containing alcohol 36.0 1.3E+02 0.0044 27.8 8.7 76 79-158 140-218 (340)
88 1zsy_A Mitochondrial 2-enoyl t 35.3 1.2E+02 0.0042 28.2 8.5 78 79-157 140-223 (357)
89 1ve1_A O-acetylserine sulfhydr 34.8 2.1E+02 0.0072 25.9 9.8 64 95-159 51-117 (304)
90 2v03_A Cysteine synthase B; py 34.8 2E+02 0.0067 26.1 9.6 63 96-159 53-116 (303)
91 1ofu_X SULA, hypothetical prot 34.7 1.4E+02 0.0047 23.0 7.1 53 92-144 47-101 (119)
92 4b7c_A Probable oxidoreductase 33.9 1.3E+02 0.0044 27.7 8.3 63 93-157 139-202 (336)
93 4h1h_A LMO1638 protein; MCCF-l 33.6 1.2E+02 0.004 28.2 7.8 60 99-158 8-86 (327)
94 1o69_A Aminotransferase; struc 33.6 1.6E+02 0.0056 27.6 9.2 61 95-158 64-130 (394)
95 2pqm_A Cysteine synthase; OASS 33.3 1.5E+02 0.0052 27.5 8.7 62 97-159 71-133 (343)
96 2cf5_A Atccad5, CAD, cinnamyl 32.9 1E+02 0.0035 28.8 7.5 77 79-158 153-233 (357)
97 3uhf_A Glutamate racemase; str 32.5 55 0.0019 29.6 5.1 63 48-117 38-100 (274)
98 1y7l_A O-acetylserine sulfhydr 32.4 1.6E+02 0.0054 26.9 8.6 64 95-159 53-117 (316)
99 3pc3_A CG1753, isoform A; CBS, 31.7 1.8E+02 0.0061 29.0 9.4 61 97-158 106-167 (527)
100 3sr3_A Microcin immunity prote 31.1 1.4E+02 0.0049 27.7 8.0 60 99-158 9-87 (336)
101 3dwg_A Cysteine synthase B; su 30.8 2.4E+02 0.0081 25.9 9.5 63 96-159 65-128 (325)
102 3qwb_A Probable quinone oxidor 30.7 2.4E+02 0.0081 25.8 9.6 60 95-157 140-200 (334)
103 2ayi_A Aminopeptidase T; metal 30.7 1E+02 0.0035 29.7 7.0 51 84-134 4-58 (408)
104 2jtq_A Phage shock protein E; 30.5 1.1E+02 0.0038 21.3 5.7 46 77-129 22-67 (85)
105 1h2b_A Alcohol dehydrogenase; 30.4 1.6E+02 0.0054 27.5 8.4 63 93-158 175-239 (359)
106 1oft_A SULA, hypothetical prot 30.0 1.7E+02 0.0057 24.0 7.1 53 92-144 89-143 (161)
107 3out_A Glutamate racemase; str 29.9 1E+02 0.0034 27.7 6.4 62 48-116 21-82 (268)
108 1zuw_A Glutamate racemase 1; ( 29.5 1.8E+02 0.006 26.1 8.1 62 48-116 17-79 (272)
109 3tla_A MCCF; serine protease, 29.3 1.5E+02 0.0051 28.1 7.8 60 99-158 39-117 (371)
110 4e5s_A MCCFLIKE protein (BA_56 29.2 1.5E+02 0.0053 27.4 7.8 60 99-158 8-86 (331)
111 2gzm_A Glutamate racemase; enz 29.2 1.7E+02 0.0056 26.2 7.9 62 48-116 17-78 (267)
112 3goh_A Alcohol dehydrogenase, 29.0 1.3E+02 0.0044 27.4 7.3 72 79-155 116-190 (315)
113 3ri6_A O-acetylhomoserine sulf 28.5 1.6E+02 0.0056 28.3 8.2 63 107-169 100-165 (430)
114 4ej6_A Putative zinc-binding d 28.4 1.8E+02 0.0063 27.2 8.5 60 93-156 173-233 (370)
115 3jv7_A ADH-A; dehydrogenase, n 28.2 2E+02 0.0067 26.6 8.6 78 79-159 143-225 (345)
116 1uuf_A YAHK, zinc-type alcohol 27.9 1.8E+02 0.0061 27.3 8.3 62 93-158 185-246 (369)
117 1zjc_A Aminopeptidase AMPS; me 27.8 94 0.0032 30.0 6.2 51 84-134 7-61 (418)
118 3dzz_A Putative pyridoxal 5'-p 27.7 1.6E+02 0.0054 27.4 8.0 53 101-156 107-166 (391)
119 1yqd_A Sinapyl alcohol dehydro 27.7 2.2E+02 0.0075 26.6 8.9 63 93-158 177-240 (366)
120 1eg5_A Aminotransferase; PLP-d 27.7 1.8E+02 0.0061 26.9 8.3 9 148-156 111-119 (384)
121 3two_A Mannitol dehydrogenase; 27.5 1.9E+02 0.0064 26.8 8.3 73 79-155 150-225 (348)
122 1gu7_A Enoyl-[acyl-carrier-pro 27.2 1.6E+02 0.0053 27.5 7.7 78 79-157 139-223 (364)
123 1mdo_A ARNB aminotransferase; 27.2 1.5E+02 0.005 27.8 7.6 58 96-157 72-134 (393)
124 3ijw_A Aminoglycoside N3-acety 26.8 44 0.0015 30.1 3.4 24 89-112 18-41 (268)
125 2jfz_A Glutamate racemase; cel 26.8 72 0.0025 28.3 4.9 61 48-115 14-74 (255)
126 3oon_A Outer membrane protein 26.7 94 0.0032 23.8 5.0 75 32-109 21-95 (123)
127 3uog_A Alcohol dehydrogenase; 25.8 1.8E+02 0.0062 27.1 7.9 74 79-156 162-239 (363)
128 3krt_A Crotonyl COA reductase; 25.7 1.9E+02 0.0065 28.1 8.2 77 79-158 199-281 (456)
129 3isl_A Purine catabolism prote 25.4 2.5E+02 0.0086 26.3 9.0 58 100-158 83-144 (416)
130 3a2b_A Serine palmitoyltransfe 25.3 2.7E+02 0.0092 25.9 9.2 55 100-158 124-181 (398)
131 2e7j_A SEP-tRNA:Cys-tRNA synth 25.1 2.6E+02 0.0088 25.6 8.9 56 100-158 90-155 (371)
132 3sma_A FRBF; N-acetyl transfer 25.1 49 0.0017 30.0 3.4 29 77-112 20-48 (286)
133 2nyg_A YOKD protein; PFAM02522 24.9 49 0.0017 29.9 3.4 22 91-112 18-39 (273)
134 4eye_A Probable oxidoreductase 24.7 2E+02 0.0068 26.5 7.9 77 79-158 132-212 (342)
135 3fpc_A NADP-dependent alcohol 24.6 1.6E+02 0.0056 27.3 7.3 75 79-157 140-218 (352)
136 2hqs_H Peptidoglycan-associate 23.9 1.8E+02 0.0061 22.1 6.1 66 39-108 17-82 (118)
137 2jfq_A Glutamate racemase; cel 23.9 2.3E+02 0.008 25.5 7.9 63 47-116 35-97 (286)
138 3b8x_A WBDK, pyridoxamine 5-ph 23.7 2.4E+02 0.0083 26.3 8.4 55 99-157 76-135 (390)
139 2ch1_A 3-hydroxykynurenine tra 23.7 2.9E+02 0.0099 25.6 9.0 57 100-157 90-150 (396)
140 4dup_A Quinone oxidoreductase; 23.4 2.5E+02 0.0086 26.0 8.3 76 79-157 140-219 (353)
141 4a2c_A Galactitol-1-phosphate 23.3 2.9E+02 0.0099 25.3 8.8 64 92-159 150-214 (346)
142 3uko_A Alcohol dehydrogenase c 23.2 1.9E+02 0.0065 27.1 7.5 75 79-157 166-245 (378)
143 3l6b_A Serine racemase; pyrido 23.0 1.3E+02 0.0045 28.0 6.2 50 111-160 83-132 (346)
144 2j8z_A Quinone oxidoreductase; 22.6 2.5E+02 0.0085 26.0 8.1 75 79-156 135-213 (354)
145 4eb5_A Probable cysteine desul 22.2 1.3E+02 0.0045 27.8 6.2 11 147-157 109-119 (382)
146 2z9v_A Aspartate aminotransfer 22.1 2.5E+02 0.0086 26.0 8.2 58 100-158 80-142 (392)
147 2vvt_A Glutamate racemase; iso 22.1 2.6E+02 0.009 25.2 7.9 63 47-116 37-99 (290)
148 1pl8_A Human sorbitol dehydrog 22.0 2E+02 0.0068 26.7 7.3 74 79-157 146-223 (356)
149 1piw_A Hypothetical zinc-type 21.8 2E+02 0.007 26.7 7.4 75 79-157 153-230 (360)
150 2oho_A Glutamate racemase; iso 21.6 2.5E+02 0.0086 25.0 7.6 64 47-117 25-88 (273)
151 3ss7_X D-serine dehydratase; t 21.4 4.4E+02 0.015 25.4 9.8 55 106-160 162-216 (442)
152 4hvk_A Probable cysteine desul 21.0 1.5E+02 0.005 27.4 6.2 12 146-157 108-119 (382)
153 1y80_A Predicted cobalamin bin 21.0 3.6E+02 0.012 22.7 8.2 57 103-159 88-148 (210)
154 3euc_A Histidinol-phosphate am 20.6 2.7E+02 0.0091 25.6 7.9 55 100-157 106-164 (367)
155 3ndn_A O-succinylhomoserine su 20.4 3.1E+02 0.011 26.1 8.5 22 402-423 344-366 (414)
156 3nnk_A Ureidoglycine-glyoxylat 20.4 3.6E+02 0.012 25.0 9.0 58 100-158 85-146 (411)
157 4a0s_A Octenoyl-COA reductase/ 20.4 2.2E+02 0.0074 27.5 7.4 75 79-156 191-271 (447)
158 2c81_A Glutamine-2-deoxy-scyll 20.4 1.7E+02 0.0058 27.7 6.6 58 95-156 74-136 (418)
159 3cq5_A Histidinol-phosphate am 20.1 3.8E+02 0.013 24.6 8.9 53 101-156 114-170 (369)
No 1
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=1.7e-59 Score=490.76 Aligned_cols=404 Identities=22% Similarity=0.307 Sum_probs=336.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCc--CCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCC
Q 010568 35 GFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGK--AGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVN 112 (507)
Q Consensus 35 ~~~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~--~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n 112 (507)
+++.......|+.++|+++++++||++|+++. ++. .+..+++||+||.++++++|++|++.|+++||+|+|+++|
T Consensus 10 ~~p~~~~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~ 86 (549)
T 3g7s_A 10 GFPSLYYPKISLADRIDAAAEKFGEKTAIISA---EPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPN 86 (549)
T ss_dssp CCCCCCCCCCCTTHHHHHHHHHHTTSEEEEEE---SSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCS
T ss_pred CCCCCCcCCCCHHHHHHHHHHhCCCceEEEeC---CCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Confidence 34445566789999999999999999999987 521 2334679999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHH
Q 010568 113 CPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEI 192 (507)
Q Consensus 113 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 192 (507)
++++++++|||+++|++++|++|.++.+++.++++.++++++|++......+....... ....++.++..
T Consensus 87 ~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------- 156 (549)
T 3g7s_A 87 SIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKT--GVERVFVVGGE-------- 156 (549)
T ss_dssp SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTS--CCCEEEEETCS--------
T ss_pred CHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhC--CCcEEEEeCCC--------
Confidence 99999999999999999999999999999999999999999999988776655544332 24556555432
Q ss_pred hhcCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEE
Q 010568 193 EKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYV 272 (507)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 272 (507)
...++++...............++++++|+|||||||.||+|+++|.++...+..+...+ ++...|+++
T Consensus 157 ------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~ 225 (549)
T 3g7s_A 157 ------VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVAT-----GLSHMDTIV 225 (549)
T ss_dssp ------SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHH-----CCCTTCEEE
T ss_pred ------CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHc-----CCCCCCEEE
Confidence 235666665543322222222348999999999999999999999999999988865544 788999999
Q ss_pred EecChHHHHHHHHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 010568 273 SYLPLAHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAY 351 (507)
Q Consensus 273 ~~~pl~h~~g~~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 351 (507)
+.+|++|.+++..++.++..|+++++.+. ++..+++.|+++++|+++++|++++.+++.........
T Consensus 226 ~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~------------ 293 (549)
T 3g7s_A 226 GCMPMFHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTY------------ 293 (549)
T ss_dssp CCSCTTSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCC------------
T ss_pred EeCcHHHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccC------------
Confidence 99999999999888888999999999876 99999999999999999999999999877543321100
Q ss_pred HhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHh----hC---CcEEeecccccCcc
Q 010568 352 SYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVV----AC---AHVLQGYGLTETCA 424 (507)
Q Consensus 352 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~----~~---~~v~~~YG~tE~~~ 424 (507)
..+++|.+++||+++++++.+.+.+. ++ +++++.||+||+++
T Consensus 294 -------------------------------~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~ 342 (549)
T 3g7s_A 294 -------------------------------DWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACP 342 (549)
T ss_dssp -------------------------------CCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSS
T ss_pred -------------------------------CccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccch
Confidence 01379999999999999999999887 56 89999999999998
Q ss_pred ceeccCCCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc---ccC--ceee
Q 010568 425 GTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM---VDG--WFHT 499 (507)
Q Consensus 425 ~~~~~~~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~---~dg--w~~T 499 (507)
+++..........+++|+|++|++++|+|.++++.++ .|+.|||+|+||+++.|||++|+.++++| .+| ||+|
T Consensus 343 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~--~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~T 420 (549)
T 3g7s_A 343 MVTTNPPLRLDKSTTQGVPMSDIELKVISLEDGRELG--VGESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRT 420 (549)
T ss_dssp EEEECCGGGGGGTTSCCEECTTCEEEEECSSSCCEEC--TTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEE
T ss_pred hhhcCCccccCcCCCccccCCCCEEEEEeCCCCcCCC--CCCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEcc
Confidence 8877666554556899999999999999955555444 56999999999999999999999999999 678 9999
Q ss_pred c-cEEEecC
Q 010568 500 G-MGVWEQL 507 (507)
Q Consensus 500 G-lg~~d~d 507 (507)
| +|++|+|
T Consensus 421 GDl~~~~~d 429 (549)
T 3g7s_A 421 GDVGFIDEE 429 (549)
T ss_dssp EEEEEECTT
T ss_pred CcEEEEcCC
Confidence 9 9999986
No 2
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=2.5e-59 Score=488.30 Aligned_cols=395 Identities=22% Similarity=0.306 Sum_probs=326.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
..|+.++|+++++++||++|+++. ++ +..+++||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 17 ~~~l~~~l~~~a~~~p~~~a~~~~---~~--~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 91 (541)
T 1v25_A 17 ELNLWDFLERAAALFGRKEVVSRL---HT--GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFA 91 (541)
T ss_dssp CCCTHHHHHHHHHHSTTCEEEEEC---TT--SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCceEEEEe---cC--CCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 368999999999999999999864 22 2236899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEeeH
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSW 202 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 202 (507)
|+++|++++|++|.++.+++.++++.++++++|++.+....+...... .+.++.++.++..... ....+
T Consensus 92 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~ 160 (541)
T 1v25_A 92 VPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGE-LKTVQHFVVMDEKAPE----------GYLAY 160 (541)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGG-CSSCCEEEESSSCCCT----------TCEEH
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhh-CCCccEEEEecCCCCc----------ccccH
Confidence 999999999999999999999999999999999998766554443322 2445566666543210 13356
Q ss_pred HHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010568 203 DEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFD 282 (507)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 282 (507)
++++..... .....++++++|+|||||||.||+|.++|.+++....... .....++..+|++++.+|++|.++
T Consensus 161 ~~~~~~~~~----~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~~~d~~l~~~p~~h~~~ 233 (541)
T 1v25_A 161 EEALGEEAD----PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAAS---LVDGTALSEKDVVLPVVPMFHVNA 233 (541)
T ss_dssp HHHCCSCCC----CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTT---STTTTCCCTTCEEEECSCTTSHHH
T ss_pred HHHhhccCC----cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhh---hcccccCCCCCEEEEeccchhhhH
Confidence 665543311 1344678999999999999999999999999987665421 112336788999999999999999
Q ss_pred HHHHHHHHHcCCEEEEecC--CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhhhc
Q 010568 283 RAIEEVFISNGAAIGFWRG--DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKK 360 (507)
Q Consensus 283 ~~~~~~~l~~G~~v~l~~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 360 (507)
+...+.+++.|+++++.+. ++..+++.++++++|+++++|++++.+++.......
T Consensus 234 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~----------------------- 290 (541)
T 1v25_A 234 WCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGH----------------------- 290 (541)
T ss_dssp HTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTC-----------------------
T ss_pred HHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCC-----------------------
Confidence 9778888999999999864 999999999999999999999999998765432211
Q ss_pred CCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCC-------
Q 010568 361 GHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNE------- 433 (507)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~------- 433 (507)
..+++|.+++||+++++++.+.+ +.+++++++.||+||++.+++......
T Consensus 291 ----------------------~l~~lr~i~~gG~~l~~~~~~~~-~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~ 347 (541)
T 1v25_A 291 ----------------------RLKTLRRLVVGGSAAPRSLIARF-ERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSE 347 (541)
T ss_dssp ----------------------CCSSCCEEEECSSCCCHHHHHHH-HHTTCEEEEEEECGGGSSEEEECCCCGGGTTSCH
T ss_pred ----------------------cchhccEEEECCCCCCHHHHHHH-HHhCCceeecccccccccceecccccccccccCc
Confidence 11379999999999999999999 567999999999999998776654431
Q ss_pred ---CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEecC
Q 010568 434 ---MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 434 ---~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~d 507 (507)
....+++|+|+||++++|+| ++++.++.+.++.|||+|+||+++.|||++|+.|+++| .||||+|| +|++|+|
T Consensus 348 ~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~d 425 (541)
T 1v25_A 348 EEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEE 425 (541)
T ss_dssp HHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTT
T ss_pred cccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCC
Confidence 02347899999999999999 88887776545799999999999999999999999999 59999999 9999976
No 3
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=1e-59 Score=492.36 Aligned_cols=407 Identities=20% Similarity=0.314 Sum_probs=326.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh
Q 010568 37 PAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW 116 (507)
Q Consensus 37 ~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~ 116 (507)
+..+....|+.++|.++++++||++|++... ++..+ +++||+||.++++++|++|+++|+++||+|+|+++|++++
T Consensus 13 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~a~~--~~~~~--~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 88 (550)
T 3rix_A 13 PFYPLEDGTAGEQLHKAMKRYALVPGTIAFT--DAHIE--VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF 88 (550)
T ss_dssp CSSCCCCSCHHHHHHHHHHHHHTSTTCEEEE--ETTTC--CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT
T ss_pred CCCCcccCCHHHHHHHHHHhCCCCceEEEee--ecCCC--cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccH
Confidence 4445566899999999999999999987320 22111 5799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcC
Q 010568 117 IIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYG 196 (507)
Q Consensus 117 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 196 (507)
++++|||+++|++++|++|.++.+++.++++.++++++|++.+....+....... +.+..++.++.....
T Consensus 89 ~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------- 158 (550)
T 3rix_A 89 FMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKL-PIIQKIIIMDSKTDY--------- 158 (550)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHC-TTCCEEEETTCSSCB---------
T ss_pred HHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhC-CCcceEEEEcCCccc---------
Confidence 9999999999999999999999999999999999999999988766555443322 456667766543211
Q ss_pred ceEeeHHHHHhccccCC------CCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcE
Q 010568 197 LAVYSWDEFLQLGENKQ------FDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDV 270 (507)
Q Consensus 197 ~~~~~~~~l~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~ 270 (507)
.....+.++........ .+.....++++++|+|||||||.||+|.++|.++...+......+ ...++..+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (550)
T 3rix_A 159 QGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPI--FGNQIIPDTA 236 (550)
T ss_dssp TTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTT--TSCCCCTTCE
T ss_pred cCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhh--ccccCCCCcE
Confidence 12445666665432211 111122457899999999999999999999999988877643221 1136788999
Q ss_pred EEEecChHHHHHHHHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHH
Q 010568 271 YVSYLPLAHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNI 349 (507)
Q Consensus 271 ~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 349 (507)
+++.+|++|.+++...+.+++.|+++++.+. ++..+++.|+++++|+++++|+++..+++...
T Consensus 237 ~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------------- 300 (550)
T 3rix_A 237 ILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTL---------------- 300 (550)
T ss_dssp EEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCG----------------
T ss_pred EEEechHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcc----------------
Confidence 9999999999999888889999999999876 99999999999999999999999999865211
Q ss_pred HHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCc-EEeecccccCccceec
Q 010568 350 AYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAH-VLQGYGLTETCAGTFV 428 (507)
Q Consensus 350 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~-v~~~YG~tE~~~~~~~ 428 (507)
....++ ++||.+++||+++++++.+.+.+.++.. +++.||+||+++.++.
T Consensus 301 ---------------------~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~ 351 (550)
T 3rix_A 301 ---------------------IDKYDL--------SNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILI 351 (550)
T ss_dssp ---------------------GGGSCC--------TTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEE
T ss_pred ---------------------ccccCc--------ccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceec
Confidence 111111 3899999999999999999999998865 9999999999988777
Q ss_pred cCCCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEec
Q 010568 429 SLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQ 506 (507)
Q Consensus 429 ~~~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~ 506 (507)
...... ..+++|+|+|+++++|+|.+++. +++.|+.|||+|+|++++.|||++|+.+++.| .||||+|| +|++|+
T Consensus 352 ~~~~~~-~~~~vG~~~~~~~~~i~d~~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~ 428 (550)
T 3rix_A 352 TPEGDD-KPGAVGKVVPFFEAKVVDLDTGK--TLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDE 428 (550)
T ss_dssp CCTTCC-CTTEEEEECTTCEEEEECTTTCC--BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT
T ss_pred CCCCCC-CCCCcccccCCcEEEEEeCCCCc--CCCCCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeC
Confidence 665443 45899999999999999933344 44556999999999999999999999999999 89999999 999998
Q ss_pred C
Q 010568 507 L 507 (507)
Q Consensus 507 d 507 (507)
|
T Consensus 429 d 429 (550)
T 3rix_A 429 D 429 (550)
T ss_dssp T
T ss_pred C
Confidence 6
No 4
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=1.4e-59 Score=489.94 Aligned_cols=412 Identities=22% Similarity=0.261 Sum_probs=331.2
Q ss_pred CCCceeecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCC
Q 010568 22 SIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVE 101 (507)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~ 101 (507)
....+|++...... .+...|+.++|.++++++||++|+++. ++. +++||+||.++++++|++|+++|++
T Consensus 4 ~~~~i~~~~~~~~~----~p~~~~l~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~ 72 (536)
T 3ni2_A 4 QEEFIFRSKLPDIY----IPKNLPLHSYVLENLSNHSSKPCLING---ANG----DVYTYADVELTARRVASGLNKIGIQ 72 (536)
T ss_dssp -CCCCBCCSSCCCC----CCSSCCHHHHHTTTGGGSTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccceEEecCCCCCC----CCCCCcHHHHHHHHhhcCCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHHHcCCC
Confidence 44566666654322 234589999999999999999999864 322 5799999999999999999999999
Q ss_pred CCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEe
Q 010568 102 ERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSF 181 (507)
Q Consensus 102 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~ 181 (507)
+||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++......+...... ... .++.+
T Consensus 73 ~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~-~~~~~ 149 (536)
T 3ni2_A 73 QGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARE--SDV-KVMCV 149 (536)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHH--HTC-EEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhh--cCc-eEEEe
Confidence 999999999999999999999999999999999999999999999999999999998766554433211 112 34444
Q ss_pred cCCChhhHHHHhhcCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhc
Q 010568 182 SKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESV 261 (507)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~ 261 (507)
+.... ....++++...... ..+.....++++++|+|||||||.||+|+++|.+++..+....... ..
T Consensus 150 ~~~~~-----------~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~-~~ 216 (536)
T 3ni2_A 150 DSAPD-----------GCLHFSELTQADEN-EAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGD-NP 216 (536)
T ss_dssp SCCCT-----------TCEETHHHHTSCGG-GCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSS-SC
T ss_pred cCCCC-----------CccCHHHHhhcccc-ccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhc-cc
Confidence 43221 23466666654422 2233345789999999999999999999999999988876532211 11
Q ss_pred cccCCCCcEEEEecChHHHHHHHH-HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhcc
Q 010568 262 NEKLTSEDVYVSYLPLAHIFDRAI-EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSG 339 (507)
Q Consensus 262 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~ 339 (507)
...+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|+++..+++..
T Consensus 217 ~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------- 289 (536)
T 3ni2_A 217 NLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSP------- 289 (536)
T ss_dssp SSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCS-------
T ss_pred cccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCc-------
Confidence 335788999999999999999965 7788999999999876 9999999999999999999999999886421
Q ss_pred chhHHHHHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecc
Q 010568 340 GLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYG 418 (507)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG 418 (507)
.....+ .+++|.+++||+++++++.+.+++.+ ++++++.||
T Consensus 290 ------------------------------~~~~~~--------l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG 331 (536)
T 3ni2_A 290 ------------------------------DLDKHD--------LSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYG 331 (536)
T ss_dssp ------------------------------CGGGSC--------CTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEE
T ss_pred ------------------------------ccccCC--------CccceEEEECCCCCCHHHHHHHHHHCCCCCcccccc
Confidence 011111 13899999999999999999999988 899999999
Q ss_pred cccCccceeccC----CCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-c
Q 010568 419 LTETCAGTFVSL----PNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-V 493 (507)
Q Consensus 419 ~tE~~~~~~~~~----~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~ 493 (507)
+||++.+++.+. ......++++|+|++|++++|+|.+++..+ +.|+.|||+|+|++++.|||++|+.+.+.| .
T Consensus 332 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~--~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~ 409 (536)
T 3ni2_A 332 MTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASL--PRNQPGEICIRGDQIMKGYLNDPEATSRTIDK 409 (536)
T ss_dssp CGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBC--CTTCCEEEEEESTTSCSEETTCHHHHHHHBCT
T ss_pred ccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCC--CCCCccEEEEeCcccchhhcCChhHHHhhccC
Confidence 999997765442 122334589999999999999993334444 456999999999999999999999999999 7
Q ss_pred cCceeec-cEEEecC
Q 010568 494 DGWFHTG-MGVWEQL 507 (507)
Q Consensus 494 dgw~~TG-lg~~d~d 507 (507)
+|||+|| +|++|+|
T Consensus 410 ~g~~~TGDl~~~~~d 424 (536)
T 3ni2_A 410 EGWLHTGDIGYIDDD 424 (536)
T ss_dssp TSCEEEEEEEEECTT
T ss_pred CCceEcccEEEEcCC
Confidence 9999999 9999986
No 5
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=5.4e-59 Score=486.12 Aligned_cols=391 Identities=13% Similarity=0.155 Sum_probs=322.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
..|+.++|+++++++||++|+++. + +++||+||.++++++|++|+++|+++||+|+|+++|++++++++||
T Consensus 29 ~~tl~~~l~~~a~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA 99 (544)
T 3o83_A 29 DQPLTRILTVGVQSHPHSLAIICG----E-----RQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFA 99 (544)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCceEEEcC----C-----CceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
Confidence 478999999999999999999864 2 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChh----HHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCce
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIP----EMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLA 198 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 198 (507)
|+++|++++|+++.++.+++.++++.++++++|++..... ...............++.++....
T Consensus 100 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 167 (544)
T 3o83_A 100 LLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQAT------------ 167 (544)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTT------------
T ss_pred HHHhCcEEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCcc------------
Confidence 9999999999999999999999999999999999886531 111111111134455555553311
Q ss_pred EeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChH
Q 010568 199 VYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLA 278 (507)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 278 (507)
...+.++...............++++++|+|||||||.||+|+++|.++...+......+ ++..+|++++.+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~ 242 (544)
T 3o83_A 168 DFGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEIC-----GLNSNTRLLCALPAP 242 (544)
T ss_dssp SEEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTT
T ss_pred ccchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHh-----CCCCCCeEEEecCcc
Confidence 124455554443322333455789999999999999999999999999999998865544 788999999999999
Q ss_pred HHHHHHH--HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHH
Q 010568 279 HIFDRAI--EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKF 355 (507)
Q Consensus 279 h~~g~~~--~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (507)
|.+++.. ++.++..|+++++.+. ++..+++.|+++++|+++++|+++..+++.....
T Consensus 243 h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------------- 302 (544)
T 3o83_A 243 HNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQY-------------------- 302 (544)
T ss_dssp SHHHHHSSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTT--------------------
T ss_pred eEeecchHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhc--------------------
Confidence 9999874 7888999999999876 9999999999999999999999999987642211
Q ss_pred hhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCc
Q 010568 356 HNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMS 435 (507)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~ 435 (507)
..++ ++||.+++||+++++++.+.+.+.+++++++.||+||++..+.........
T Consensus 303 -----------------~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~ 357 (544)
T 3o83_A 303 -----------------KDQI--------QSLKLLQVGGASFPESLARQVPEVLNCKLQQVFGMAEGLVNYTRLDDSDEQ 357 (544)
T ss_dssp -----------------HHHH--------TTCCEEEEESSCCCHHHHTHHHHHHCSEEEEEEECTTSCEEECCTTSCHHH
T ss_pred -----------------cccC--------CcceEEEEcCCCCCHHHHHHHHHHhCCcEEeeeccccccceeecCCCchhh
Confidence 0111 389999999999999999999999999999999999998655444333333
Q ss_pred cCCcccccc-cCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEecC
Q 010568 436 MIGTVGPPV-PNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 436 ~~~s~G~p~-pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~d 507 (507)
...++|+|+ ++++++|+| ++++.++. |+.|||+|+||+++.|||++|+.+++.| .||||+|| +|++|+|
T Consensus 358 ~~~~~G~p~~~~~~~~i~d-~~~~~~~~--g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~d 429 (544)
T 3o83_A 358 IFTTQGRPISSDDEIKIVD-EQYREVPE--GEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPD 429 (544)
T ss_dssp HHHCCCEESCTTCEEEEEC-TTSCBCCT--TCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTT
T ss_pred ccCCCceecCCCcEEEEEC-CCCCCCCC--CCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCC
Confidence 447899996 899999999 87776554 5999999999999999999999999999 79999999 9999976
No 6
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2.8e-58 Score=483.30 Aligned_cols=397 Identities=17% Similarity=0.174 Sum_probs=324.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHH
Q 010568 41 PGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM 120 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 120 (507)
..++...++|+++++++||++|+++. +. .+..+.+||+||.++++++|++|+++|+++||+|+|+++|++++++++
T Consensus 53 ~~~n~~~~~l~~~a~~~pd~~Al~~~---~~-~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~ 128 (580)
T 3etc_A 53 ENFNFAYDVVDVYARDSPEKLAMIWC---DD-YGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCM 128 (580)
T ss_dssp SSCCHHHHTHHHHHHHCTTCEEEEEE---ES-SSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHH
T ss_pred ccchHHHHHHHHHHhhCCCCEEEEEE---cC-CCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 44566669999999999999999986 43 234578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCCh--hHHhhcCCCCCCCc-cEEEEecCCChhhHHHHhhcCc
Q 010568 121 EACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKI--PEMLKTFPKTTEHL-KTIVSFSKVKPEQREEIEKYGL 197 (507)
Q Consensus 121 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ 197 (507)
|||+++|++++|++|.++.+++.++++.++++++|++.+.. ..+....... +.+ ..++.++.... .
T Consensus 129 lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~ 197 (580)
T 3etc_A 129 LGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAEC-GDIPLKKAKVGGDVL----------E 197 (580)
T ss_dssp HHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHH-CSCCCEEEEESSSCC----------T
T ss_pred HHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhC-CCcceEEEEeCCccc----------c
Confidence 99999999999999999999999999999999999987654 3333222211 222 34555543211 1
Q ss_pred eEeeHHHHHhccccCCCCC---CCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEe
Q 010568 198 AVYSWDEFLQLGENKQFDL---PVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSY 274 (507)
Q Consensus 198 ~~~~~~~l~~~~~~~~~~~---~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 274 (507)
....+.+.+.......... ....++++++|+|||||||.||+|.++|.+++..+... ....++..++++++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 272 (580)
T 3etc_A 198 GWIDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTA-----KYWQNVEDDGLHYTV 272 (580)
T ss_dssp TCEEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHH-----HTTSCCCTTCEEEEC
T ss_pred ccccHHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHH-----HHhhCCCCCceEEEe
Confidence 2456766665443221111 24578999999999999999999999999988777653 233478889999999
Q ss_pred cChHHHHHHHH-HHHHHHcCCEEEEec---CCHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 010568 275 LPLAHIFDRAI-EEVFISNGAAIGFWR---GDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIA 350 (507)
Q Consensus 275 ~pl~h~~g~~~-~~~~l~~G~~v~l~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 350 (507)
.|++|..+.+. ++.++..|+++++.+ +++..+++.|+++++|+++++|++++.|++..
T Consensus 273 ~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~------------------ 334 (580)
T 3etc_A 273 ADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED------------------ 334 (580)
T ss_dssp CCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC------------------
T ss_pred CChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc------------------
Confidence 99999888775 778899999999874 29999999999999999999999999885410
Q ss_pred HHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccC
Q 010568 351 YSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSL 430 (507)
Q Consensus 351 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 430 (507)
.... ..++||.+++||+++++++.+++.+.+|+++++.||+||++..++...
T Consensus 335 --------------------~~~~--------~l~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~ 386 (580)
T 3etc_A 335 --------------------LSHY--------NFSTLKYAVVAGEPLNPEVFNRFLEFTGIKLMEGFGQTETVVTIATFP 386 (580)
T ss_dssp --------------------C-----------CCTTCCEEEECSSCCCHHHHHHHHHHHSCCCEEEECCTTSSCCEECCT
T ss_pred --------------------cccC--------CCccceEEEEccCCCCHHHHHHHHHHhCCeEecccccccccceeecCC
Confidence 0011 114899999999999999999999989999999999999987666554
Q ss_pred CCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEec-----CCccccccCChhhhhhhcccCceeec-cEEE
Q 010568 431 PNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKG-----STVFSGYYKREDLTKEVMVDGWFHTG-MGVW 504 (507)
Q Consensus 431 ~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g-----~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~ 504 (507)
.. ...++++|+|+||++++|+| ++++.++. |+.|||+|+| ++++.|||++|+.+++.|.||||+|| +|++
T Consensus 387 ~~-~~~~~~~G~p~~~~~v~ivd-~~g~~~~~--g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~~ 462 (580)
T 3etc_A 387 WM-EPKPGSIGKPTPGYKIELMD-RDGRLCEV--GEEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAWM 462 (580)
T ss_dssp TS-CCCTTCCBEECTTCEEEEEC-TTSCBCCT--TCCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEEE
T ss_pred CC-CCCCCccccCCCCCEEEEEC-CCCCCCCC--CCceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEEE
Confidence 43 34458999999999999999 88776554 5999999997 78999999999999999999999999 9999
Q ss_pred ecC
Q 010568 505 EQL 507 (507)
Q Consensus 505 d~d 507 (507)
|+|
T Consensus 463 d~d 465 (580)
T 3etc_A 463 DED 465 (580)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 7
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.1e-58 Score=480.94 Aligned_cols=391 Identities=22% Similarity=0.295 Sum_probs=318.6
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhH
Q 010568 38 APIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWI 117 (507)
Q Consensus 38 ~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 117 (507)
...+...|+.++|+++++++||++|+++. +.. +++||+||.++++++|++|+++|+++||+|+|+++|+++++
T Consensus 10 ~~~~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~ 82 (517)
T 3r44_A 10 DDDDKMKNIGWMLRQRATVSPRLQAYVEP---STD----VRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFC 82 (517)
T ss_dssp --CGGGGCHHHHHHHHHHHSTTSEEEEEG---GGT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH
T ss_pred CCcccccCHHHHHHHHHHhCCCCeEEEeC---CcC----ceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHH
Confidence 34467799999999999999999999865 332 57999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCc
Q 010568 118 IGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGL 197 (507)
Q Consensus 118 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 197 (507)
+++|||+++|++++|++|.++.+++.++++.++++++|++......+....... .....++.+..
T Consensus 83 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------- 147 (517)
T 3r44_A 83 CLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQA-DPPGTVTDWIG-------------- 147 (517)
T ss_dssp HHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSS-SCCTTCCEEEE--------------
T ss_pred HHHHHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhcc-CCccEEEEccC--------------
Confidence 999999999999999999999999999999999999999987655443322111 11111111110
Q ss_pred eEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecCh
Q 010568 198 AVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPL 277 (507)
Q Consensus 198 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 277 (507)
...+.+...... .........++++++|+|||||||.||+|+++|.++.+.+..+...+ ++..+|++++.+|+
T Consensus 148 -~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~ 220 (517)
T 3r44_A 148 -ADSLAERLRSAA-ADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTI-----DVRYRDRLLLPLPM 220 (517)
T ss_dssp -HHHHHHHHHHCC-CCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHS-----CCCTTCEEEECSCT
T ss_pred -cccHHHHhhccC-cCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhc-----CCCCCCEEEEeCch
Confidence 012334443321 12233445789999999999999999999999999999988855544 78899999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHh
Q 010568 278 AHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFH 356 (507)
Q Consensus 278 ~h~~g~~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (507)
+|.+++...+.+++.|+++++.+. ++..+++.+.++++|+++++|++++.+.+......
T Consensus 221 ~~~~~~~~~~~~~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------- 280 (517)
T 3r44_A 221 FHVAALTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAE-------------------- 280 (517)
T ss_dssp TSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHH--------------------
T ss_pred HHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccccc--------------------
Confidence 999999876666569999998876 99999999999999999999999999865321111
Q ss_pred hhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCC-Cc
Q 010568 357 NLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNE-MS 435 (507)
Q Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-~~ 435 (507)
...+++|.+++||+++++++.+.+.+. ++++++.||+||+++.++...... ..
T Consensus 281 -------------------------~~~~~lr~i~~gGe~l~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~ 334 (517)
T 3r44_A 281 -------------------------LDAPDFRYFITGGAPMPEALIKIYAAK-NIEVVQGYALTESCGGGTLLLSEDALR 334 (517)
T ss_dssp -------------------------CCCTTCCEEEECSSCCCHHHHHHHHHT-TCEEEEEEECGGGTTCEEEECGGGTTT
T ss_pred -------------------------CCCCcccEEEECCCCCCHHHHHHHHhc-CCcEEEeecccccccceeecCCccccc
Confidence 112489999999999999999999986 899999999999988776554433 34
Q ss_pred cCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 436 MIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 436 ~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
..+++|+|+++++++|+| +++..++.+ .|||+|+|++++.|||++|+.+.++|.+|||+|| +|++|+|
T Consensus 335 ~~~~~G~~~~~~~~~i~d-~~~~~~~~g---~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~~d 403 (517)
T 3r44_A 335 KAGSAGRATMFTDVAVRG-DDGVIREHG---EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDDE 403 (517)
T ss_dssp TTTCCBEECTTEEEEEEC-TTSCEESSE---EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEEEEECTT
T ss_pred cCCCCCcCCCCeEEEEEC-CCCCCCCCC---CeEEEEeCcchhhhhCCChhhhHhhhcCCCEecceeEEEcCC
Confidence 558999999999999999 777665553 7999999999999999999999999999999999 9999986
No 8
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=1.7e-58 Score=481.90 Aligned_cols=387 Identities=15% Similarity=0.180 Sum_probs=314.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
..|+.++|+++++++||++|+++. + +++||+||.++++++|++|+++|+++||+|+|+++|++++++++||
T Consensus 24 ~~tl~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 94 (539)
T 1mdb_A 24 GETFGDLLRDRAAKYGDRIAITCG---N------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFA 94 (539)
T ss_dssp SCCHHHHHHHHHHHHTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCEEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 468999999999999999999853 2 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChh----HHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCce
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIP----EMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLA 198 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 198 (507)
|+++|++++|++|.++.+++.++++.++++++|++.+... ..........+.++.++..+...
T Consensus 95 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 161 (539)
T 1mdb_A 95 LFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE------------- 161 (539)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT-------------
T ss_pred HHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCcc-------------
Confidence 9999999999999999999999999999999999875321 11111100113344454443211
Q ss_pred EeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChH
Q 010568 199 VYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLA 278 (507)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 278 (507)
.+.++.... ......+...++++++++|||||||.||+|.++|.++.+.+......+ ++..+|++++.+|++
T Consensus 162 --~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~ 233 (539)
T 1mdb_A 162 --EFLPLEDLH-TEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVC-----WLDHSTVYLAALPMA 233 (539)
T ss_dssp --TSEEGGGCC-CCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECSCTT
T ss_pred --chhhhhhcc-ccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCCEEEEeeccc
Confidence 111122111 111122345678999999999999999999999999999888755544 688999999999999
Q ss_pred HHHHHHH--HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHH
Q 010568 279 HIFDRAI--EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKF 355 (507)
Q Consensus 279 h~~g~~~--~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (507)
|.+++.. ++.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+++.......
T Consensus 234 h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~------------------ 295 (539)
T 1mdb_A 234 HNYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRD------------------ 295 (539)
T ss_dssp SHHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCC------------------
T ss_pred ccchhhHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCC------------------
Confidence 9999874 7888999999999876 999999999999999999999999998764322110
Q ss_pred hhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCc
Q 010568 356 HNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMS 435 (507)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~ 435 (507)
..++||.+++||+++++++.+++++.+++++++.||+||++..+.........
T Consensus 296 ---------------------------~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~ 348 (539)
T 1mdb_A 296 ---------------------------DLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEI 348 (539)
T ss_dssp ---------------------------CCTTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTTSCEEECCTTSCHHH
T ss_pred ---------------------------CccceeEEEEcCCCCCHHHHHHHHHHhCCcEEEEEcCCCCcccccCCCCcHHh
Confidence 01389999999999999999999998999999999999965433322211122
Q ss_pred cCCcccccccCc-eEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEecC
Q 010568 436 MIGTVGPPVPNV-DVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 436 ~~~s~G~p~pg~-~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~d 507 (507)
..+++|+|+++. +++|+| ++++.++. |+.|||+|+||+++.|||++|+.|+++| .||||+|| +|++|+|
T Consensus 349 ~~~~~G~p~~~~~~~~i~d-~~~~~~~~--g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~d 420 (539)
T 1mdb_A 349 IVNTQGKPMSPYDESRVWD-DHDRDVKP--GETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRD 420 (539)
T ss_dssp HHHCCCEESSTTCEEEEEC-TTSCBCCT--TCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTT
T ss_pred cCCCCCcccCCCceEEEEC-CCCCCCcC--CCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEECCC
Confidence 347899999765 899999 77766554 5999999999999999999999999999 79999999 9999986
No 9
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=7.4e-58 Score=477.70 Aligned_cols=412 Identities=23% Similarity=0.301 Sum_probs=325.3
Q ss_pred CCceeecCccCCCCCCCCCCCCCHHH-HHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCC
Q 010568 23 IGPVYRSLFAKDGFPAPIPGMESCWD-VFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVE 101 (507)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~tl~~-~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~ 101 (507)
.+++|++..... ..+...|+.+ +|.++++++ |++|+++. ++. +++||+||.++++++|+.|+++|++
T Consensus 8 ~~~~~~~~~~~~----~~p~~~~l~~~~l~~~~~~~-~~~A~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~ 75 (548)
T 2d1s_A 8 ENIVVGPKPFYP----IEEGSAGTQLRKYMERYAKL-GAIAFTNA---VTG----VDYSYAEYLEKSCCLGKALQNYGLV 75 (548)
T ss_dssp TTSEECCCCSSC----CCSSCHHHHHHHHHHHHHHH-TCEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHHTCC
T ss_pred cceEecCCCCCC----CCCCcCcHHHHHHHhhhccc-CCceEEEc---CCC----CEeeHHHHHHHHHHHHHHHHHcCCC
Confidence 346777664321 2234468999 899999999 99999863 222 5799999999999999999999999
Q ss_pred CCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEe
Q 010568 102 ERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSF 181 (507)
Q Consensus 102 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~ 181 (507)
+||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++.+....+....... +....++.+
T Consensus 76 ~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~ 154 (548)
T 2d1s_A 76 VDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTV-TTIKTIVIL 154 (548)
T ss_dssp TTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHS-TTCCEEEET
T ss_pred CCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCC-CCCCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999988766544332111 223455555
Q ss_pred cCCChhhHHHHhhcCceEeeHHHHHhccccCCCCCCCCC-----C-CCeEEEEeccCCCCCCceeeeccHHHHHHHhhhh
Q 010568 182 SKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKK-----K-NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVK 255 (507)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~-~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~ 255 (507)
+..... .....|+++............... + +++++|+|||||||.||+|.++|.++...+....
T Consensus 155 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~ 225 (548)
T 2d1s_A 155 DSKVDY---------RGYQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHAR 225 (548)
T ss_dssp TCSSCB---------TTBCBHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHT
T ss_pred CCcccc---------cccccHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhh
Confidence 432100 012356666654321101111111 3 8999999999999999999999999998887743
Q ss_pred hhhhhccccCCCCcEEEEecChHHHHHHHH-HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHH
Q 010568 256 CLLESVNEKLTSEDVYVSYLPLAHIFDRAI-EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLN 333 (507)
Q Consensus 256 ~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~ 333 (507)
..+ ...++..+|++++.+|++|.+++.. ++.++ .|+++++.+. ++..+++.|+++++|+++++|++++.+++..
T Consensus 226 ~~~--~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~- 301 (548)
T 2d1s_A 226 DPI--YGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSE- 301 (548)
T ss_dssp CTT--TSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCS-
T ss_pred chh--hccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCc-
Confidence 321 0146788999999999999999876 55567 9999998875 9999999999999999999999999886521
Q ss_pred HhhhccchhHHHHHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCc
Q 010568 334 QKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAH 412 (507)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~ 412 (507)
.....+ .+++|.+++||+++++++.+.+.+.+ +.+
T Consensus 302 ------------------------------------~~~~~~--------l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 337 (548)
T 2d1s_A 302 ------------------------------------LLNKYD--------LSNLVEIASGGAPLSKEVGEAVARRFNLPG 337 (548)
T ss_dssp ------------------------------------CGGGSC--------CTTCCEEEECSSCCCHHHHHHHHHHTTCSC
T ss_pred ------------------------------------cccccc--------ccceeEEEEcCccCCHHHHHHHHHHcCCCc
Confidence 001111 13899999999999999999999988 688
Q ss_pred EEeecccccCccceeccCCCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc
Q 010568 413 VLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM 492 (507)
Q Consensus 413 v~~~YG~tE~~~~~~~~~~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~ 492 (507)
+++.||+||++.+++..... ....+++|+|+|+++++|+|.++++.+ +.|+.|||+|+|++++.|||++|+.|.+.|
T Consensus 338 i~~~YG~TE~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~--~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f 414 (548)
T 2d1s_A 338 VRQGYGLTETTSAIIITPEG-DDKPGASGKVVPLFKAKVIDLDTKKSL--GPNRRGEVCVKGPMLMKGYVNNPEATKELI 414 (548)
T ss_dssp CEEEEECGGGSSEEEECCTT-CCCTTCCBEECTTCEEEEECTTTCCBC--CTTCCEEEEEESTTSCSEETTCHHHHHHHB
T ss_pred eeeccccccccceeeecCcc-cCCCCCCCccCCCceEEEEeCCcCccC--CCCCCeEEEECCHHHhhhhcCChHHhhhcc
Confidence 99999999998877664433 334589999999999999994344444 456999999999999999999999999999
Q ss_pred -ccCceeec-cEEEecC
Q 010568 493 -VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 493 -~dgw~~TG-lg~~d~d 507 (507)
.+|||+|| +|++|+|
T Consensus 415 ~~~g~~~TGDl~~~~~d 431 (548)
T 2d1s_A 415 DEEGWLHTGDIGYYDEE 431 (548)
T ss_dssp CTTSCEEEEEEEEECTT
T ss_pred cCCcEEEccCEEEEcCC
Confidence 79999999 9999976
No 10
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=1.9e-57 Score=470.40 Aligned_cols=379 Identities=19% Similarity=0.235 Sum_probs=305.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
|+|+.++|+++++++||++|+.+. +.+ +++||+||.++++++|++|+++|+++||+|+|+++|++++++++||
T Consensus 1 M~tl~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 73 (504)
T 1t5h_X 1 MQTVNEMLRRAATRAPDHCALAVP---ARG----LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILA 73 (504)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEEET---TTT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCCCceEEEEc---CCC----ceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 578999999999999999999864 222 6799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEe--cCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEe
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFV--EEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVY 200 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 200 (507)
|+++|++++|++|.++.+++.++++.++++++|+ +.+....+..... .++ ++
T Consensus 74 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~----~~~-~~--------------------- 127 (504)
T 1t5h_X 74 LHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGS----GAR-II--------------------- 127 (504)
T ss_dssp HHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCC----CCE-EE---------------------
T ss_pred HHHhCcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccc----cce-eE---------------------
Confidence 9999999999999999999999999999999999 6654443312211 111 22
Q ss_pred eHHHHHhccc----cCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccC--CCCcEEEEe
Q 010568 201 SWDEFLQLGE----NKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKL--TSEDVYVSY 274 (507)
Q Consensus 201 ~~~~l~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~--~~~d~~l~~ 274 (507)
.++++..... ..........++++++|+|||||||.||+|.++|+++...+..+...+ ++ ..+|++++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~l~~ 202 (504)
T 1t5h_X 128 FLGDLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQV-----GLRHGRHNVVLGL 202 (504)
T ss_dssp EGGGTEETTEECCCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTT-----CCCSSTTCEEEEC
T ss_pred EecchhhcCcccccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhh-----CCCCCCCceEEee
Confidence 2223322210 111112345678999999999999999999999999998887754433 55 788999999
Q ss_pred cChHHHHHHH-HHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 010568 275 LPLAHIFDRA-IEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYS 352 (507)
Q Consensus 275 ~pl~h~~g~~-~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 352 (507)
+|++|.+++. .++.++..|+++++.+. ++..+++.|+++++|+++++|++++.+++.......
T Consensus 203 ~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--------------- 267 (504)
T 1t5h_X 203 MPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGS--------------- 267 (504)
T ss_dssp SCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTC---------------
T ss_pred cchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccc---------------
Confidence 9999999985 47888999999999876 999999999999999999999999998763211000
Q ss_pred hHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCC
Q 010568 353 YKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPN 432 (507)
Q Consensus 353 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~ 432 (507)
. ...++||.+++||+++++++.+.+++.++..+++.||+||++. +....
T Consensus 268 --------------------~--------~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~-~~~~~-- 316 (504)
T 1t5h_X 268 --------------------S--------LKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAMN-SLYMR-- 316 (504)
T ss_dssp --------------------C--------CCCTTCCEEEECCTTCCHHHHHHHHHHCCSEEEEEEEETTTEE-EEEEE--
T ss_pred --------------------c--------ccCccccEEEEcCCcCCHHHHHHHHHhcCcceeeeeccccccc-ccccc--
Confidence 0 0013899999999999999999999999999999999999943 32222
Q ss_pred CCccCCcccccccCceEEEeecCCC-ccccCCCCCCceEEEe-cCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 433 EMSMIGTVGPPVPNVDVCLESVPEM-EYDALSSTPRGEVCVK-GSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 433 ~~~~~~s~G~p~pg~~i~ivd~~~~-~~~~~~~g~~Gel~v~-g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
....+++|.|.++++++|+| +++ ...+++.|+.|||+|+ |+.++.|||++|+.+.++|.||||+|| +|++|+|
T Consensus 317 -~~~~~~~g~p~~~~~~~i~~-~~~~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~TGDlg~~~~d 392 (504)
T 1t5h_X 317 -QPKTGTEMAPGFFSEVRIVR-IGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPE 392 (504)
T ss_dssp -SCSSSSEEBCCTTCCEEEEC-TTSCTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEECTT
T ss_pred -CCCCCccccCCCCCceeEEe-ccCCCCCcCCCCCcceEEEeCCceeeceecCCchhhhhhhcCCccccCcEEEECCC
Confidence 22348899999999999999 555 2234456699999999 999999999999999999999999999 9999986
No 11
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=1.5e-57 Score=471.88 Aligned_cols=382 Identities=20% Similarity=0.282 Sum_probs=314.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHH
Q 010568 42 GMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGME 121 (507)
Q Consensus 42 ~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 121 (507)
...|+.++|+++++++||++|+++. + +++||+||.++++++|++|++.|+++||+|+++++|++++++++|
T Consensus 4 ~~~tl~~~l~~~a~~~pd~~Al~~~----~-----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 74 (509)
T 3ivr_A 4 HDFTLADVYRRNAALFPDRTAFMVD----G-----VRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIG 74 (509)
T ss_dssp TCCCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHCCCceEEEEC----C-----cEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999864 2 579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEee
Q 010568 122 ACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYS 201 (507)
Q Consensus 122 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 201 (507)
||+++|++++|++|.++.+++.++++.++++++|++.+....+....... .....++.++.... .
T Consensus 75 A~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~ 139 (509)
T 3ivr_A 75 AVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSL-GGVKKAYAIGDGSG--------------P 139 (509)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGC-SSCCEEEESSCCCS--------------S
T ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhccc-CCceEEEEcCCCCc--------------C
Confidence 99999999999999999999999999999999999998776644443322 55666666654211 1
Q ss_pred HHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHH
Q 010568 202 WDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIF 281 (507)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 281 (507)
+.++...........+...++++++|+|||||||.||+|.++|.++...+..+...+ ++.++|++++.+|++|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~ 214 (509)
T 3ivr_A 140 FAPFKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAW-----RLTEADVNLGMLPLFHVT 214 (509)
T ss_dssp CEEGGGTCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHH
T ss_pred hhhHhhccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEeCCCcchh
Confidence 222222121223334456789999999999999999999999999999988865544 789999999999999999
Q ss_pred HHHHHHHHHHcCCEEEE-ecCCHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhhhc
Q 010568 282 DRAIEEVFISNGAAIGF-WRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKK 360 (507)
Q Consensus 282 g~~~~~~~l~~G~~v~l-~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 360 (507)
++...+.++..|+..++ ...++..+++.|+++++|+++++|+++..+++...
T Consensus 215 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--------------------------- 267 (509)
T 3ivr_A 215 GLGLMLTLQQAGGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQAA--------------------------- 267 (509)
T ss_dssp HHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHCC---------------------------
T ss_pred HHHHHHHHHHhCCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhccc---------------------------
Confidence 99887766555555444 44499999999999999999999999999876320
Q ss_pred CCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecccccCccceeccCCCCCccCCc
Q 010568 361 GHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYGLTETCAGTFVSLPNEMSMIGT 439 (507)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~s 439 (507)
..++ +++|.++++|++ ++.+.+.+.+ ++++++.||+||++++++....... ..+
T Consensus 268 ------------~~~l--------~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~--~~~ 322 (509)
T 3ivr_A 268 ------------PAQL--------ASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAPYRDR--PKS 322 (509)
T ss_dssp ------------GGGG--------TTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEEGGGS--TTS
T ss_pred ------------ccch--------hhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCccccC--CCc
Confidence 0001 378999999987 7788888887 8999999999999987766544332 255
Q ss_pred ccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 440 VGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 440 ~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
+|+|++|++++|+| ++++.++. |+.|||+|+|++++.|||++|+.+.+.|.+|||+|| +|++|+|
T Consensus 323 ~G~p~~~~~~~i~d-~~~~~~~~--g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~~d 388 (509)
T 3ivr_A 323 AGRPLFWRTVAVVD-AEDRPLPP--GEVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFDAD 388 (509)
T ss_dssp CCEECTTCEEEEEC-TTSCBCCT--TCCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEECTT
T ss_pred ccccCCCcEEEEEC-CCCCCCCC--CCceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEECCC
Confidence 99999999999999 87765554 599999999999999999999999999999999999 9999976
No 12
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=8.8e-57 Score=471.27 Aligned_cols=394 Identities=16% Similarity=0.163 Sum_probs=323.9
Q ss_pred CCCCCHHHHHHHHHHh-----CCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEeCCch
Q 010568 41 PGMESCWDVFRMAVER-----NPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTC-GVEERGKCGIYGVNCP 114 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~-----~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gv~~gd~V~i~~~n~~ 114 (507)
..++++.++|++++++ +||++|+++. +. .+..+++||+||.++++++|++|++. |+++||+|+|+++|++
T Consensus 35 ~~~~~~~~~l~~~a~~~~a~~~p~~~al~~~---~~-~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~ 110 (570)
T 3c5e_A 35 AKFNFASDVLDHWADMEKAGKRPPSPALWWV---NG-KGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVP 110 (570)
T ss_dssp SBCCHHHHTHHHHHHHHHTTSSCCCEEEEEE---CS-SSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCH
T ss_pred ccccHHHHHHHHHHhhccccCCCCceEEEEE---cC-CCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCH
Confidence 3456778999999999 9999999976 42 22346899999999999999999998 9999999999999999
Q ss_pred hhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhh
Q 010568 115 EWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEK 194 (507)
Q Consensus 115 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 194 (507)
++++++|||+++|++++|++|.++.+++.++++.++++++|++.+....+....... +.++.++.++....
T Consensus 111 e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------- 181 (570)
T 3c5e_A 111 EWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASEC-PSLRIKLLVSEKSC-------- 181 (570)
T ss_dssp HHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGC-TTCCEEEEESSSCC--------
T ss_pred HHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcC-CceeEEEEecccCc--------
Confidence 999999999999999999999999999999999999999999988776654433222 44556666654211
Q ss_pred cCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHH--HHhhhhhhhhhccccCCCCcEEE
Q 010568 195 YGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVT--FIAGVKCLLESVNEKLTSEDVYV 272 (507)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~--~~~~~~~~~~~~~~~~~~~d~~l 272 (507)
.....+++++..... ........++++++|+|||||||.||+|.++|. ++. .... . ...++..+|+++
T Consensus 182 --~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~-----~-~~~~~~~~d~~~ 251 (570)
T 3c5e_A 182 --DGWLNFKKLLNEAST-THHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMD-----A-GWTGLQASDIMW 251 (570)
T ss_dssp --TTSEEHHHHHHHSCS-CCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHH-----T-TTTSCCTTCEEE
T ss_pred --cccccHHHHhhcccc-cccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhh-----h-hhcCCCCCceEE
Confidence 013456676654322 122234567999999999999999999999999 544 3332 1 234678999999
Q ss_pred EecChHHHHHHHH-HHHHHHcCCEEEEec---CCHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHH
Q 010568 273 SYLPLAHIFDRAI-EEVFISNGAAIGFWR---GDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFN 348 (507)
Q Consensus 273 ~~~pl~h~~g~~~-~~~~l~~G~~v~l~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~ 348 (507)
+.+|++|.+++.. ++.++..|+++++.+ .++..+++.|+++++|+++++|++++.+++..
T Consensus 252 ~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------------- 315 (570)
T 3c5e_A 252 TISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD---------------- 315 (570)
T ss_dssp ECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC----------------
T ss_pred EcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc----------------
Confidence 9999999999874 788899999999885 39999999999999999999999999886420
Q ss_pred HHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceec
Q 010568 349 IAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFV 428 (507)
Q Consensus 349 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~ 428 (507)
... ...+++|.+++||+++++++.+.+.+.+++++++.||+||++..++.
T Consensus 316 ----------------------~~~--------~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~ 365 (570)
T 3c5e_A 316 ----------------------LSS--------YKFPHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGLTCMV 365 (570)
T ss_dssp ----------------------TTT--------CCCTTCCEEEEESSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEEC
T ss_pred ----------------------ccc--------cccccceEEEEcCCcCCHHHHHHHHHHhCCchhhccchhhcccceec
Confidence 000 01147999999999999999999999889999999999999876655
Q ss_pred cCCCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEe-----cCCccccccCChhhhhhhcccCceeec-cE
Q 010568 429 SLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVK-----GSTVFSGYYKREDLTKEVMVDGWFHTG-MG 502 (507)
Q Consensus 429 ~~~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~-----g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg 502 (507)
.... ....+++|+|+||++++|+| ++++.++ .|+.|||+|+ |++++.|||++|+.+.+.|.+|||+|| +|
T Consensus 366 ~~~~-~~~~~~vG~p~~~~~v~i~d-~~g~~~~--~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg 441 (570)
T 3c5e_A 366 SKTM-KIKPGYMGTAASCYDVQIID-DKGNVLP--PGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRG 441 (570)
T ss_dssp CTTS-CCCTTCCCEECTTCCEEEEC-TTSCBCC--TTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEE
T ss_pred Cccc-ccCCCcccccCCCceEEEEC-CCCCCCC--CCCCCeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeE
Confidence 4432 33458999999999999999 8777655 4599999999 999999999999999999999999999 99
Q ss_pred EEecC
Q 010568 503 VWEQL 507 (507)
Q Consensus 503 ~~d~d 507 (507)
++|+|
T Consensus 442 ~~d~d 446 (570)
T 3c5e_A 442 IKDED 446 (570)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 99976
No 13
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1e-57 Score=470.28 Aligned_cols=390 Identities=16% Similarity=0.187 Sum_probs=304.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHH
Q 010568 42 GMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGME 121 (507)
Q Consensus 42 ~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 121 (507)
...|+.++|+++++++||++|+++.+..++.++.++++||+||.++++++|++|+++|+ +||+|+|+++|++++++++|
T Consensus 22 ~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~l 100 (480)
T 3t5a_A 22 SVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFL 100 (480)
T ss_dssp --CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHH
T ss_pred CcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHH
Confidence 35789999999999999999999871101334455789999999999999999999996 99999999999999999999
Q ss_pred HHHhcCCEEeeccC---CCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCC-CccEEEEecCCChhhHHHHhhcCc
Q 010568 122 ACNALGLHCVPLYD---TLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTE-HLKTIVSFSKVKPEQREEIEKYGL 197 (507)
Q Consensus 122 A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 197 (507)
||+++|++++|+++ .++.+++.++++.++++++|++.+....+......... ....++.++..
T Consensus 101 A~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 167 (480)
T 3t5a_A 101 GALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLL------------- 167 (480)
T ss_dssp HHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGS-------------
T ss_pred HHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEeccc-------------
Confidence 99999999999999 78899999999999999999999887776655433211 11123322211
Q ss_pred eEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCC------CcEE
Q 010568 198 AVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTS------EDVY 271 (507)
Q Consensus 198 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~------~d~~ 271 (507)
.... ..........++++++|+|||||||.||+|+++|.++..++......+ .+.. +|++
T Consensus 168 --------~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~~~d~~ 233 (480)
T 3t5a_A 168 --------DLDA-PNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGY-----FADTDGIPPPNSAL 233 (480)
T ss_dssp --------CTTC-C---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHH-----CTTTTTCCCTTEEE
T ss_pred --------cccc-ccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHh-----ccccccCCCCCCeE
Confidence 1101 111223345678999999999999999999999999999888865544 4455 8999
Q ss_pred EEecChHHHHHHHH-HHHHHHcCCEEEEecC-----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHH
Q 010568 272 VSYLPLAHIFDRAI-EEVFISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKT 345 (507)
Q Consensus 272 l~~~pl~h~~g~~~-~~~~l~~G~~v~l~~~-----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~ 345 (507)
++.+|++|.+++.. ++.+++.|+++++.+. ++..+++.++++++| +.++|+++..++.......
T Consensus 234 l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~--------- 303 (480)
T 3t5a_A 234 VSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDD--------- 303 (480)
T ss_dssp EECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTG---------
T ss_pred EEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcc---------
Confidence 99999999999865 7888999999999862 889999999999999 8899999988765321100
Q ss_pred HHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhC------CcEEeeccc
Q 010568 346 LFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVAC------AHVLQGYGL 419 (507)
Q Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~------~~v~~~YG~ 419 (507)
..... ..++||.+++||+++++++.+++.+.++ ..+++.||+
T Consensus 304 ------------------------~~~~~--------~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~ 351 (480)
T 3t5a_A 304 ------------------------DMAGR--------DLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWL 351 (480)
T ss_dssp ------------------------GGTTC--------CCTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEE
T ss_pred ------------------------ccccc--------chhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccccccc
Confidence 00011 1148999999999999999999999873 479999999
Q ss_pred ccCccceeccCCCCC------------------------ccCCcccccccCceEEEeecCC-CccccCCCCCCceEEEec
Q 010568 420 TETCAGTFVSLPNEM------------------------SMIGTVGPPVPNVDVCLESVPE-MEYDALSSTPRGEVCVKG 474 (507)
Q Consensus 420 tE~~~~~~~~~~~~~------------------------~~~~s~G~p~pg~~i~ivd~~~-~~~~~~~~g~~Gel~v~g 474 (507)
||++++++....... ....++|+|+| ++++|+| ++ +..+ +.|+.|||+|+|
T Consensus 352 TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~-~~~~ivd-~~~g~~~--~~g~~GEl~v~g 427 (480)
T 3t5a_A 352 AEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS-PIVRIVD-SDTCIEC--PDGTVGEIWVHG 427 (480)
T ss_dssp TTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-SEEEEEE-TTTTEEC--CTTBCEEEEEES
T ss_pred cccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-CEEEEEc-CCCCcCC--CCCCEEEEEEeC
Confidence 999988776654321 23458999999 9999999 65 4444 456999999999
Q ss_pred CCccccccCChhhhhhhc------------ccCceeec-cEEEe
Q 010568 475 STVFSGYYKREDLTKEVM------------VDGWFHTG-MGVWE 505 (507)
Q Consensus 475 ~~v~~gY~~~~~~~~~~~------------~dgw~~TG-lg~~d 505 (507)
|+++.|||++|+.|+++| .+|||+|| +|++|
T Consensus 428 ~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d 471 (480)
T 3t5a_A 428 DNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT 471 (480)
T ss_dssp TTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE
T ss_pred CccccccccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEE
Confidence 999999999999999999 35699999 99997
No 14
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=4.8e-57 Score=480.38 Aligned_cols=406 Identities=14% Similarity=0.213 Sum_probs=325.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
.+++.++|+++++++||++|+++. +...+..+++||+||.++++++|++|+++|+++||+|+|+++|++++++++||
T Consensus 75 ~n~~~~~l~~~a~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA 151 (652)
T 1pg4_A 75 LNLAANCLDRHLQENGDRTAIIWE---GDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLA 151 (652)
T ss_dssp ECHHHHHTGGGHHHHTTSEEEEEE---CSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred hhHHHHHHHHHhccCCCceEEEEE---cCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 367889999999999999999986 43344557899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCCh---------hHHhhcCCCCC-CCccEEEEecCCChhhHHHH
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKI---------PEMLKTFPKTT-EHLKTIVSFSKVKPEQREEI 192 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~ 192 (507)
|+++|++++|+++.++.+++.++++++++++||+++... ..+........ ..++.+++++......
T Consensus 152 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~---- 227 (652)
T 1pg4_A 152 CARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDI---- 227 (652)
T ss_dssp HHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCC----
T ss_pred HHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcc----
Confidence 999999999999999999999999999999999987542 11222222110 2355677665321100
Q ss_pred hhcCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhh-hhhhhhhccccCCCCcEE
Q 010568 193 EKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAG-VKCLLESVNEKLTSEDVY 271 (507)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~ 271 (507)
.........|++++..... ........++++++|+|||||||.||||+++|.+++..... +.. .+++.++|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~-----~~~~~~~d~~ 301 (652)
T 1pg4_A 228 DWQEGRDLWWRDLIEKASP-EHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKY-----VFDYHPGDIY 301 (652)
T ss_dssp CCCBTTEEEHHHHHTTSCS-CCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHH-----HTTCCTTCEE
T ss_pred cccCCCceeHHHHHhhcCC-CCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHH-----hcCCCCCCEE
Confidence 0000123568887764422 12233456799999999999999999999999998876643 222 2368899999
Q ss_pred EEecChHHHHHHH-HHHHHHHcCCEEEEecC-----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHH
Q 010568 272 VSYLPLAHIFDRA-IEEVFISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKT 345 (507)
Q Consensus 272 l~~~pl~h~~g~~-~~~~~l~~G~~v~l~~~-----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~ 345 (507)
++.+|++|..++. .++.+|+.|+++++.+. ++..+++.|+++++|+++++|++++.+++.....
T Consensus 302 l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---------- 371 (652)
T 1pg4_A 302 WCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKA---------- 371 (652)
T ss_dssp EECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGG----------
T ss_pred EEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccc----------
Confidence 9999999999985 47899999999999863 7899999999999999999999999886521100
Q ss_pred HHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhC---CcEEeecccccC
Q 010568 346 LFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVAC---AHVLQGYGLTET 422 (507)
Q Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~---~~v~~~YG~tE~ 422 (507)
.... ..++||.+++||+++++++.+++.+.+| +++++.||+||+
T Consensus 372 -------------------------~~~~--------~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~ 418 (652)
T 1pg4_A 372 -------------------------IEGT--------DRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTET 418 (652)
T ss_dssp -------------------------TTTC--------CCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGG
T ss_pred -------------------------cccC--------CcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCccc
Confidence 0000 1148999999999999999999999887 899999999999
Q ss_pred ccceeccCCCC-CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEec--CCccccccCChhhhhhhc---ccCc
Q 010568 423 CAGTFVSLPNE-MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKG--STVFSGYYKREDLTKEVM---VDGW 496 (507)
Q Consensus 423 ~~~~~~~~~~~-~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g--~~v~~gY~~~~~~~~~~~---~dgw 496 (507)
++.++...+.. ...++++|+|+||++++|+| ++++.++. |+.|||+|+| |+++.|||++++.+.+.| .+||
T Consensus 419 ~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v~~--g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~ 495 (652)
T 1pg4_A 419 GGFMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQEG--ATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNM 495 (652)
T ss_dssp SSCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCS--SEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTS
T ss_pred ccceecCCCCCcCccCCccccCcCCCeEEEEC-CCCCCcCC--CceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCE
Confidence 98766654432 34568999999999999999 87776554 5899999999 789999999999988877 3899
Q ss_pred eeec-cEEEecC
Q 010568 497 FHTG-MGVWEQL 507 (507)
Q Consensus 497 ~~TG-lg~~d~d 507 (507)
|+|| +|++|+|
T Consensus 496 y~TGDlg~~d~d 507 (652)
T 1pg4_A 496 YFSGDGARRDED 507 (652)
T ss_dssp EEEEEEEEECTT
T ss_pred EECCcEEEEcCC
Confidence 9999 9999986
No 15
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=4.2e-57 Score=474.50 Aligned_cols=373 Identities=17% Similarity=0.176 Sum_probs=307.9
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHH
Q 010568 39 PIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWII 118 (507)
Q Consensus 39 ~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~ 118 (507)
..+...++.++|+++++++||++|+++. + +++||+||.++++++|++|+++|+++||+|+|+++|++++++
T Consensus 70 ~~~~~~~l~~~l~~~a~~~pd~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~ 140 (570)
T 4gr5_A 70 RAPAGACVHELFEAQAARAPDAVALLHE---A------DELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVV 140 (570)
T ss_dssp CCCCSCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHH
T ss_pred cCCccCCHHHHHHHHHHHCCCCeEEECC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH
Confidence 3456789999999999999999999864 2 579999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCce
Q 010568 119 GMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLA 198 (507)
Q Consensus 119 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 198 (507)
++|||+++|++++|++|.++.+++.++++.++++++|++......+ .....+...+..
T Consensus 141 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~-------------- 198 (570)
T 4gr5_A 141 ALLAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRL--------TGTTTLYVEDEA-------------- 198 (570)
T ss_dssp HHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSS--------CSSEEEECCC----------------
T ss_pred HHHHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEEecchhhhcc--------cCCcceeeeccc--------------
Confidence 9999999999999999999999999999999999999987643221 112222211110
Q ss_pred EeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChH
Q 010568 199 VYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLA 278 (507)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 278 (507)
.. ............++++++|+|||||||.||+|+++|.++.+.... ....++..+|++++.+|++
T Consensus 199 -------~~-~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~------~~~~~~~~~d~~l~~~p~~ 264 (570)
T 4gr5_A 199 -------AS-DAPAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG------QDYAGFGPDEVFLQCSPVS 264 (570)
T ss_dssp -------------CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS------CCSSCCSTTCEEEECSCTT
T ss_pred -------cc-cccccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh------hhhcCCCCCCEEEEecCcc
Confidence 00 001112233457899999999999999999999999999776554 2233678899999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEecC---CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHH
Q 010568 279 HIFDRAIEEVFISNGAAIGFWRG---DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKF 355 (507)
Q Consensus 279 h~~g~~~~~~~l~~G~~v~l~~~---~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (507)
|..+...++.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+++.....
T Consensus 265 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-------------------- 324 (570)
T 4gr5_A 265 WDAFGLELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPEA-------------------- 324 (570)
T ss_dssp SSTHHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGGG--------------------
T ss_pred HHHHHHHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchhh--------------------
Confidence 87777778889999999999763 8999999999999999999999999986531110
Q ss_pred hhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecccccCccceeccCCCC-
Q 010568 356 HNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYGLTETCAGTFVSLPNE- 433 (507)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~- 433 (507)
+ ++||.+++||++++.++.+.+.+.+ ++++++.||+||++++++......
T Consensus 325 --------------------~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~ 376 (570)
T 4gr5_A 325 --------------------F--------EGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAG 376 (570)
T ss_dssp --------------------G--------TTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGG
T ss_pred --------------------C--------CCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeeccc
Confidence 1 3799999999999999988888876 789999999999988766543322
Q ss_pred --CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-cc--------Cceeec-c
Q 010568 434 --MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VD--------GWFHTG-M 501 (507)
Q Consensus 434 --~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~d--------gw~~TG-l 501 (507)
.....++|+|+||++++|+| +++..++. |+.|||+|+|++++.|||++|+.|+++| .| |||+|| +
T Consensus 377 ~~~~~~~~iG~p~~~~~v~i~d-~~~~~~~~--G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDl 453 (570)
T 4gr5_A 377 DLSGTALPIGVPLAGKRAYVLD-DDLKPAAN--GALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDL 453 (570)
T ss_dssp GTTSSSCCCBEECTTEEEEEEC-TTSCBCCT--TCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEE
T ss_pred ccCCCccccceeeCCCEEEEEC-CCCCCCCC--CCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCe
Confidence 22346799999999999999 87766554 5999999999999999999999999999 43 699999 9
Q ss_pred EEEecC
Q 010568 502 GVWEQL 507 (507)
Q Consensus 502 g~~d~d 507 (507)
|++|+|
T Consensus 454 g~~d~d 459 (570)
T 4gr5_A 454 ARRRAD 459 (570)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999986
No 16
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=7.8e-57 Score=468.77 Aligned_cols=393 Identities=17% Similarity=0.216 Sum_probs=312.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHH
Q 010568 41 PGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM 120 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 120 (507)
..++++.++|+++++ +||++|+++. + +++||+||.++++++|++|+++|+++||+|+|+++|++++++++
T Consensus 21 ~~~~~~~~~l~~~~~-~p~~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~ 90 (529)
T 2v7b_A 21 ALFNFAAYLFRLNET-RAGKTAYIDD---T------GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAF 90 (529)
T ss_dssp -CCCHHHHHHHHTGG-GTTSEEEECS---S------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHH
T ss_pred cceeHHHHHHHhhhc-cCCceEEEeC---C------CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Confidence 455679999999999 9999999853 2 46999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCc-cEEEEecCCChhhHHHHhhcCceE
Q 010568 121 EACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHL-KTIVSFSKVKPEQREEIEKYGLAV 199 (507)
Q Consensus 121 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~ 199 (507)
|||+++|++++|+++.++.+++.++++.++++++|++.+....+....... ... ..++.++..... ....
T Consensus 91 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~ 161 (529)
T 2v7b_A 91 LGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESA-EHDGCQLIVSQPRESE--------PRLA 161 (529)
T ss_dssp HHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC----CCEEEEECC--------------CC
T ss_pred HHHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhc-cccCceEEEecccccc--------cccc
Confidence 999999999999999999999999999999999999987655443332111 222 344444432110 0012
Q ss_pred eeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHH-HHHHhhhhhhhhhccccCCCCcEEEEecChH
Q 010568 200 YSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENI-VTFIAGVKCLLESVNEKLTSEDVYVSYLPLA 278 (507)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l-~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 278 (507)
..++++...... ........++++++++|||||||.||+|.++|.++ ...... .....++.++|++++.+|++
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~-----~~~~~~~~~~d~~~~~~p~~ 235 (529)
T 2v7b_A 162 PLFEELIDAAAP-AAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELY-----AKPILGIAENDVVFSAAKLF 235 (529)
T ss_dssp CBHHHHHHTSCC-CSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHT-----CCCCCCCCTTCEEEESSCTT
T ss_pred cchhhhhccCCC-cccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHH-----hhhccCCCCCcEEEEeecHH
Confidence 356666653321 22233457899999999999999999999999999 555544 23334788999999999999
Q ss_pred HHHHHHH-HHHHHHcCCEEEEec-C-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHH
Q 010568 279 HIFDRAI-EEVFISNGAAIGFWR-G-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKF 355 (507)
Q Consensus 279 h~~g~~~-~~~~l~~G~~v~l~~-~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (507)
|.+++.. ++.++..|+++++.+ . ++..+++.++++++|+++++|+++..++....
T Consensus 236 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------------------- 293 (529)
T 2v7b_A 236 FAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPN---------------------- 293 (529)
T ss_dssp SHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTT----------------------
T ss_pred HHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcc----------------------
Confidence 9999876 667899999999873 3 99999999999999999999999988754100
Q ss_pred hhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCc
Q 010568 356 HNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMS 435 (507)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~ 435 (507)
.+... ..++|.+++||+++++++.+.+++.+++++++.||+||++.+++...... .
T Consensus 294 ------------~~~~~-----------~~~lr~~~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~-~ 349 (529)
T 2v7b_A 294 ------------LPARA-----------DVAIRICTSAGEALPREIGERFTAHFGCEILDGIGSTEMLHIFLSNRAGA-V 349 (529)
T ss_dssp ------------CCCGG-----------GCCCCEEEECSSCCCHHHHHHHHHHHSCCEEEEEECTTTSSEEEECCTTC-C
T ss_pred ------------ccccc-----------CCceEEEEEcCCCCCHHHHHHHHHHhCCceeeeEchhhcCceeeccccCC-C
Confidence 00000 02799999999999999999999989999999999999977666554443 3
Q ss_pred cCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 436 MIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 436 ~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
..+++|+|+||++++|+| ++++.++ .|+.|||+|+|++++.|||++++.+...|.+|||+|| +|++|+|
T Consensus 350 ~~~~~G~p~~~~~~~i~d-~~g~~~~--~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~~~~ 419 (529)
T 2v7b_A 350 EYGTTGRPVPGYEIELRD-EAGHAVP--DGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCRLPN 419 (529)
T ss_dssp CTTSCCEECTTCEEEEEC-TTSCBCC--TTSCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEECTT
T ss_pred ccCCcccCCCCCEEEEEC-CCCCCCC--CCCccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEECCC
Confidence 448999999999999999 8777655 4599999999999999999999999999999999999 9999976
No 17
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=5.3e-57 Score=466.55 Aligned_cols=382 Identities=23% Similarity=0.313 Sum_probs=306.0
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcC
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALG 127 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 127 (507)
++|++.++++||++++.... +++ +++||+||.++++++|++|+++|+++||+|+|+++|++++++++|||+++|
T Consensus 4 ~l~~~~a~~~p~~~a~~~~~--~~~----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 77 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIET--AAG----DKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAG 77 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEEE--TTC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHhCCCCceEEEec--CCC----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 57889999999999998641 122 579999999999999999999999999999999999999999999999999
Q ss_pred CEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEeeHHHHHh
Q 010568 128 LHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQ 207 (507)
Q Consensus 128 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 207 (507)
++++|++|.++.+++.++++.++++++|++.+....+....... . ..+..++.... ..+.+...
T Consensus 78 a~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-------------~~~~~~~~ 141 (503)
T 4fuq_A 78 GVYLPLNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKV-G--ATVETLGPDGR-------------GSLTDAAA 141 (503)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHH-T--CEEEECCTTSC-------------SHHHHHHH
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhc-C--ceEEEecCCcc-------------cccchhhh
Confidence 99999999999999999999999999999876543322221110 1 13333332111 11222222
Q ss_pred ccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHH-H
Q 010568 208 LGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAI-E 286 (507)
Q Consensus 208 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~ 286 (507)
.. ..........++++++|+|||||||.||+|.++|.++.+.+..+...+ ++.++|++++.+|++|.+++.. .
T Consensus 142 ~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~ 215 (503)
T 4fuq_A 142 GA-SEAFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYW-----RFTPDDVLIHALPIYHTHGLFVAS 215 (503)
T ss_dssp TS-CSCCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCSSSHCCCCCCH
T ss_pred cC-CCCcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEeCChHHHHHHHHHH
Confidence 11 112223345789999999999999999999999999999988865544 7889999999999999999765 6
Q ss_pred HHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhhhcCCCCC
Q 010568 287 EVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHV 365 (507)
Q Consensus 287 ~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (507)
+.+++.|+++++.+. ++..+++.++ ++|+++++|+++..+++...
T Consensus 216 ~~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~-------------------------------- 261 (503)
T 4fuq_A 216 NVTLFARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPR-------------------------------- 261 (503)
T ss_dssp HHHHHTTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTT--------------------------------
T ss_pred HHHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCC--------------------------------
Confidence 778999999998876 9999999998 89999999999998864210
Q ss_pred CCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCccCCccccccc
Q 010568 366 EASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVP 445 (507)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~s~G~p~p 445 (507)
.... ..+++|.+++||+++++++.+.+.+.++.++++.||+||++..+... ......++++|+|+|
T Consensus 262 -----~~~~--------~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~-~~~~~~~~~~G~p~~ 327 (503)
T 4fuq_A 262 -----LTKE--------TTGHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNMNTSNP-YDGDRVPGAVGPALP 327 (503)
T ss_dssp -----CSTT--------TTTTCCEEEECSSCCCHHHHHHHHHHHSCCEEECCEETTTEECBCCC-SSSCCCTTEEEEBCT
T ss_pred -----cccc--------chhhcEEEEECCCCCCHHHHHHHHHHhCCCccceEcccccCcccccC-CCCCCcCCccccCCC
Confidence 0000 11379999999999999999999999999999999999998765433 333444589999999
Q ss_pred CceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEecC
Q 010568 446 NVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 446 g~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~d 507 (507)
|++++|+|.++++.+ +.|+.|||+|+|++++.|||++|+.+.++| .||||+|| +|++|+|
T Consensus 328 ~~~~~i~d~~~g~~~--~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~d 389 (503)
T 4fuq_A 328 GVSARVTDPETGKEL--PRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDER 389 (503)
T ss_dssp TCEEEEECTTTCCBC--CTTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTT
T ss_pred CeEEEEEECCCCCCC--cCCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCC
Confidence 999999994444444 456999999999999999999999999999 69999999 9999986
No 18
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=1.5e-56 Score=476.69 Aligned_cols=408 Identities=17% Similarity=0.208 Sum_probs=325.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHH-HCCCCCCCEEEEEeCCchhhHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIR-TCGVEERGKCGIYGVNCPEWIIGME 121 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~-~~gv~~gd~V~i~~~n~~~~~~~~l 121 (507)
.+++.++|+++++++||++|+++. +...+..+++||+||.++++++|+.|+ ++|+++||+|+|+++|++++++++|
T Consensus 81 ~n~~~~~l~~~a~~~pd~~Al~~~---~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~l 157 (663)
T 1ry2_A 81 LNACYNCVDRHALKTPNKKAIIFE---GDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLL 157 (663)
T ss_dssp ECHHHHHTHHHHTTCTTSEEEEEE---CSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHH
T ss_pred ccHHHHHHHHHhccCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 368899999999999999999986 433344578999999999999999999 9999999999999999999999999
Q ss_pred HHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChh---------HHhhcCCCCCCCccEEEEecCCChhhHHHH
Q 010568 122 ACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIP---------EMLKTFPKTTEHLKTIVSFSKVKPEQREEI 192 (507)
Q Consensus 122 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 192 (507)
||+++|++++|+++.++.+++.++++++++++||+++.... .+.+..... +.++.+++++.......
T Consensus 158 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~--- 233 (663)
T 1ry2_A 158 AISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRET-PGVRHVLVYRKTNNPSV--- 233 (663)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSC-TTCCEEEEECSSCCSSC---
T ss_pred HHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhC-CCCceEEEEecCCCCcc---
Confidence 99999999999999999999999999999999999876421 222333222 45667777654211000
Q ss_pred hhcCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEE
Q 010568 193 EKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYV 272 (507)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 272 (507)
.........|++++..... ........++++++|+|||||||.||||+++|.+++....... ...+++..+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~----~~~~~~~~~d~~~ 308 (663)
T 1ry2_A 234 AFHAPRDLDWATEKKKYKT-YYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTM----RYTFDTHQEDVFF 308 (663)
T ss_dssp CCCSSSEEEHHHHHTTSCS-CCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHH----HHHSCCCSSCEEE
T ss_pred ccCCCccccHHHHHhhcCC-CCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHH----HHhcCCCCCcEEE
Confidence 0001124568777764321 2233445689999999999999999999999999877654321 1223688999999
Q ss_pred EecChHHHHHHH-HHHHHHHcCCEEEEecC-----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHH
Q 010568 273 SYLPLAHIFDRA-IEEVFISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTL 346 (507)
Q Consensus 273 ~~~pl~h~~g~~-~~~~~l~~G~~v~l~~~-----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~ 346 (507)
+.+|++|..+.. .++.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+.+....
T Consensus 309 ~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~------------ 376 (663)
T 1ry2_A 309 TAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDS------------ 376 (663)
T ss_dssp ECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTT------------
T ss_pred EcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCcc------------
Confidence 999999999985 47899999999999863 789999999999999999999999987531100
Q ss_pred HHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhC---CcEEeecccccCc
Q 010568 347 FNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVAC---AHVLQGYGLTETC 423 (507)
Q Consensus 347 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~---~~v~~~YG~tE~~ 423 (507)
..+..+ .++||.+++||+++++++.+++.+.+| +++++.||+||++
T Consensus 377 -----------------------~~~~~~--------l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~ 425 (663)
T 1ry2_A 377 -----------------------YIENHS--------LKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESG 425 (663)
T ss_dssp -----------------------SSSSCC--------CTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTC
T ss_pred -----------------------ccccCC--------cCceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCcccc
Confidence 000011 148999999999999999999999887 8999999999998
Q ss_pred cceeccCC--CCCccCCcccccccCceEEEeecC-CCccccCCCCCCceEEEec--CCccccccCChhhhhhhc-c--cC
Q 010568 424 AGTFVSLP--NEMSMIGTVGPPVPNVDVCLESVP-EMEYDALSSTPRGEVCVKG--STVFSGYYKREDLTKEVM-V--DG 495 (507)
Q Consensus 424 ~~~~~~~~--~~~~~~~s~G~p~pg~~i~ivd~~-~~~~~~~~~g~~Gel~v~g--~~v~~gY~~~~~~~~~~~-~--dg 495 (507)
+.++...+ .....++++|+|+||++++|+| + +++.++. .|+.|||+|+| |+++.|||++++.+.+.| . +|
T Consensus 426 ~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g~~v~~-~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g 503 (663)
T 1ry2_A 426 SHLVTPLAGGVTPMKPGSASFPFFGIDAVVLD-PNTGEELNT-SHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPG 503 (663)
T ss_dssp SCSEECCTTTCCCCCTTCCCEECTTCCEEEEC-SSSTTCEEC-SSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTT
T ss_pred CeeeccCCCCCcccCCCccccCcCCCeEEEEc-CCCCCcCCC-CCcceEEEEecCCCchhcccccChHHHHHhhhcCCCC
Confidence 77665543 2234568999999999999999 6 6665544 25899999999 589999999999998887 3 89
Q ss_pred ceeec-cEEEecC
Q 010568 496 WFHTG-MGVWEQL 507 (507)
Q Consensus 496 w~~TG-lg~~d~d 507 (507)
||+|| +|++|+|
T Consensus 504 ~y~TGDlg~~d~d 516 (663)
T 1ry2_A 504 YYFTGDGAAKDKD 516 (663)
T ss_dssp SEEEEEEEEECTT
T ss_pred EEEcCCEEEEcCC
Confidence 99999 9999986
No 19
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=3.2e-56 Score=466.34 Aligned_cols=377 Identities=18% Similarity=0.242 Sum_probs=305.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCch
Q 010568 35 GFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCP 114 (507)
Q Consensus 35 ~~~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~ 114 (507)
......+...|+.++|+++++++||++|+++. + +++||+||.++++++|++|+++|+++||+|+|+++|++
T Consensus 30 ~~~~~~~~~~~l~~~l~~~a~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 100 (563)
T 1amu_A 30 NTKAEYPRDKTIHQLFEEQVSKRPNNVAIVCE----N-----EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSI 100 (563)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHCTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHCCCCeEEEeC----C-----ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH
Confidence 33334455689999999999999999999853 2 57999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhh
Q 010568 115 EWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEK 194 (507)
Q Consensus 115 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 194 (507)
++++++|||+++|++++|++|.++.+++.++++.++++++|++.+....+..... ...+..++...
T Consensus 101 e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~-----~~~~~~~~~~~--------- 166 (563)
T 1amu_A 101 DLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF-----NGQVEIFEEDT--------- 166 (563)
T ss_dssp HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCC-----CSEEEECCCST---------
T ss_pred HHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccc-----cCceeeecchh---------
Confidence 9999999999999999999999999999999999999999998765544332211 11233222110
Q ss_pred cCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEe
Q 010568 195 YGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSY 274 (507)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 274 (507)
+.. . ..........++++++|+|||||||.||+|+++|.++.+.+..+... +++..+|++++.
T Consensus 167 ----------~~~-~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~-----~~~~~~d~~l~~ 229 (563)
T 1amu_A 167 ----------IKI-R-EGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENS-----LNVTEKDRIGQF 229 (563)
T ss_dssp ----------TTT-S-CCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHT-----SCCCTTCEEEEC
T ss_pred ----------hcc-c-cCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh-----cCCCCCCEEEEe
Confidence 000 0 01111233467899999999999999999999999999887774433 378899999999
Q ss_pred cChHHHHHHHHHHHHHHcCCEEEEecC----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 010568 275 LPLAHIFDRAIEEVFISNGAAIGFWRG----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIA 350 (507)
Q Consensus 275 ~pl~h~~g~~~~~~~l~~G~~v~l~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 350 (507)
+|++|..++..++.+++.|+++++.+. ++..+++.++++++|+++++|+++..+...
T Consensus 230 ~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------- 290 (563)
T 1amu_A 230 ASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------------------- 290 (563)
T ss_dssp SCTTSTHHHHHHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT-------------------
T ss_pred CCccHHHHHHHHHHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc-------------------
Confidence 999999998888889999999998763 889999999999999999999998765210
Q ss_pred HHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccC
Q 010568 351 YSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSL 430 (507)
Q Consensus 351 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 430 (507)
..+++|.+++||+++++++.+.+.+ .+++++.||+||++.+++...
T Consensus 291 --------------------------------~~~~lr~~~~gG~~l~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~ 336 (563)
T 1amu_A 291 --------------------------------RILSIQTLITAGSATSPSLVNKWKE--KVTYINAYGPTETTICATTWV 336 (563)
T ss_dssp --------------------------------TCCSCSEEEEESSCCCHHHHHHHTT--TSEEEEEECCGGGSSCSEEEE
T ss_pred --------------------------------ccccccEEEEEEecCCHHHHHHHHh--CCeEEEEECcCHHhHhheeee
Confidence 0137999999999999999999887 478999999999987766543
Q ss_pred CCC--CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcc-------cCceeec-
Q 010568 431 PNE--MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMV-------DGWFHTG- 500 (507)
Q Consensus 431 ~~~--~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~-------dgw~~TG- 500 (507)
... .....++|+|+||++++|+| ++++.++. |+.|||+|+|++++.|||++|+.|+++|. +|||+||
T Consensus 337 ~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~~~~~--g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGD 413 (563)
T 1amu_A 337 ATKETIGHSVPIGAPIQNTQIYIVD-ENLQLKSV--GEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGD 413 (563)
T ss_dssp CCSSCCCSSCCCBEECTTEEEEEEC-TTSCBCCT--TCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEE
T ss_pred cccccCCCCCcccceeCCCEEEEEC-CCcCCCCC--CCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCC
Confidence 322 22447899999999999999 87766554 59999999999999999999999999993 2599999
Q ss_pred cEEEecC
Q 010568 501 MGVWEQL 507 (507)
Q Consensus 501 lg~~d~d 507 (507)
+|++|+|
T Consensus 414 lg~~d~d 420 (563)
T 1amu_A 414 QARWLSD 420 (563)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 9999986
No 20
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=6.3e-56 Score=469.67 Aligned_cols=391 Identities=15% Similarity=0.185 Sum_probs=320.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHH
Q 010568 41 PGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM 120 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 120 (507)
....|+.++|+++++ ||++|+++. + +++||+||.++++++|++|++.|+++||+|+++++|++++++++
T Consensus 24 ~~~~~l~~~~~~~a~--pd~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~ 92 (617)
T 3rg2_A 24 WQDLPLTDILTRHAA--SDSIAVIDG---E------RQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITF 92 (617)
T ss_dssp CCCCCTTHHHHTTTT--CCSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred CCcCCHHHHHHHhhC--CCCeEEecC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHH
Confidence 345789999999887 999999864 2 57999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChh----HHhhcCCCCCCCccEEEEecCCChhhHHHHhhcC
Q 010568 121 EACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIP----EMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYG 196 (507)
Q Consensus 121 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 196 (507)
|||+++|++++|++|..+.+++.++++.++++++|++..... ..........+.++.+..++....
T Consensus 93 lA~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 162 (617)
T 3rg2_A 93 FALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE---------- 162 (617)
T ss_dssp HHHHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCST----------
T ss_pred HHHHhcCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccc----------
Confidence 999999999999999999999999999999999999986531 111111111134445554443321
Q ss_pred ceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecC
Q 010568 197 LAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLP 276 (507)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 276 (507)
..+.+....... ........++++++|+|||||||.||+|+++|.++.+.+......+ ++..++++++.+|
T Consensus 163 ---~~~~~~~~~~~~-~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~~~l~~~p 233 (617)
T 3rg2_A 163 ---HNLQDAINHPAE-DFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC-----QFTQQTRYLCAIP 233 (617)
T ss_dssp ---TBHHHHHHSCCS-SCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECSC
T ss_pred ---cchhhhhccccc-ccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhc-----CCCCcceEEEecc
Confidence 133444433322 2223445679999999999999999999999999999998866555 7889999999999
Q ss_pred hHHHHHHHH--HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHh
Q 010568 277 LAHIFDRAI--EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSY 353 (507)
Q Consensus 277 l~h~~g~~~--~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (507)
++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..+++.........
T Consensus 234 ~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~-------------- 299 (617)
T 3rg2_A 234 AAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRA-------------- 299 (617)
T ss_dssp TTSHHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTT--------------
T ss_pred chhhhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccc--------------
Confidence 999999874 7888999999999876 89999999999999999999999999876543221100
Q ss_pred HHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCC
Q 010568 354 KFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNE 433 (507)
Q Consensus 354 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~ 433 (507)
..+++|.+++||+++++++.+.+.+.+++++++.||+||++..++......
T Consensus 300 -----------------------------~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~ 350 (617)
T 3rg2_A 300 -----------------------------QLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSA 350 (617)
T ss_dssp -----------------------------TTTTCCEEEEESSCCCHHHHHHHHHHTCSEEEEEEEETTEEEEECCTTSCH
T ss_pred -----------------------------cCCCccEEEEcCCcCCHHHHHHHHHHhCCcEEEEeccCcceeecccCCCcc
Confidence 013799999999999999999999989999999999999986555443332
Q ss_pred CccCCcccccc-cCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEecC
Q 010568 434 MSMIGTVGPPV-PNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 434 ~~~~~s~G~p~-pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~d 507 (507)
.....++|+|+ ++++++|+| ++++.++. |+.|||+|+|++++.|||++|+.|+++| .+|||+|| +|++|+|
T Consensus 351 ~~~~~~~G~p~~~~~~~~i~d-~~~~~~p~--G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~d 424 (617)
T 3rg2_A 351 EKIIHTQGYPMCPDDEVWVAD-AEGNPLPQ--GEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPE 424 (617)
T ss_dssp HHHHHCCCEESCTTCEEEEEC-TTSCBCCT--TCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTT
T ss_pred cccccCCCccCCCCceEEEEC-CCCCCCCC--CCceEEEecCccccchhcCChhhhhhccCCCCceecCceEEEcCC
Confidence 33346899997 788999999 87776555 5999999999999999999999999999 79999999 9999976
No 21
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=5.4e-56 Score=468.59 Aligned_cols=370 Identities=16% Similarity=0.141 Sum_probs=305.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHH
Q 010568 41 PGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM 120 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 120 (507)
....|+.++|+++++++||++|+++. + +++||+||.++++++|++|++.|+++||+|+|+++|++++++++
T Consensus 24 ~~~~tl~~~~~~~a~~~Pd~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~ 94 (620)
T 4dg8_A 24 YAHPTVVARFSEMAALHPHREAIRDR---F------GSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCL 94 (620)
T ss_dssp GGSCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCeEEEcC---C------CcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHH
Confidence 45689999999999999999999864 3 57999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEe
Q 010568 121 EACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVY 200 (507)
Q Consensus 121 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 200 (507)
|||+++|++++|++|.++.+++.+++++++++++|++....... .....+
T Consensus 95 lailkaGa~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~--------~~~~~~---------------------- 144 (620)
T 4dg8_A 95 LAILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPA--------NGLPCV---------------------- 144 (620)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCC--------TTSCEE----------------------
T ss_pred HHHHHhCCEEEeeCccChHHHHHHHHHhCCCcEEEecCcccccc--------cCCcee----------------------
Confidence 99999999999999999999999999999999999765432211 111111
Q ss_pred eHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHH
Q 010568 201 SWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHI 280 (507)
Q Consensus 201 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 280 (507)
.+..+. ........+...++++++|+|||||||.||+|+++|.++.+.+.. .. ...+.++|++++.+|++|.
T Consensus 145 ~~~~~~--~~~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~-----~~~~~~~d~~l~~~p~~~~ 216 (620)
T 4dg8_A 145 PVRHLP--AAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QS-----FLAFAPQMRFLVNSPLSFD 216 (620)
T ss_dssp EGGGCC--CCCCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CG-----GGTTCTTCEEEECSCTTST
T ss_pred eeccCC--cCCccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HH-----hhCCCCCCEEEEECccCHH
Confidence 010000 001112223446899999999999999999999999999876654 22 2368899999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEecC---CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhh
Q 010568 281 FDRAIEEVFISNGAAIGFWRG---DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHN 357 (507)
Q Consensus 281 ~g~~~~~~~l~~G~~v~l~~~---~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (507)
.++..++.++..|+++++.+. ++..+++.|+++++|+++++|++++.+++....
T Consensus 217 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~----------------------- 273 (620)
T 4dg8_A 217 AATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPD----------------------- 273 (620)
T ss_dssp HHHHHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCGG-----------------------
T ss_pred HHHHHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcChh-----------------------
Confidence 999889999999999999752 899999999999999999999999988642000
Q ss_pred hhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecccccCccceeccCCCC---
Q 010568 358 LKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYGLTETCAGTFVSLPNE--- 433 (507)
Q Consensus 358 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~--- 433 (507)
..++||.+++||++++.++.+.+.+.+ +++++|.||+||++.+++......
T Consensus 274 -------------------------~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 328 (620)
T 4dg8_A 274 -------------------------CLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDL 328 (620)
T ss_dssp -------------------------GGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGGG
T ss_pred -------------------------hCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEecccccc
Confidence 013799999999999998888777665 789999999999988766543322
Q ss_pred CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhccc--------Cceeec-cEEE
Q 010568 434 MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVD--------GWFHTG-MGVW 504 (507)
Q Consensus 434 ~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~d--------gw~~TG-lg~~ 504 (507)
.....++|+|++|++++|+| +++... ++.|+.|||+|+|+++++|||++|+.|+++|.+ +||+|| +|++
T Consensus 329 ~~~~~~iG~p~~~~~~~i~d-~~~~~~-~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~ 406 (620)
T 4dg8_A 329 EEDDIPIGKAIAGTAVLLLD-EHGQEI-AEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARY 406 (620)
T ss_dssp GSSSCCCBEECTTEEEEEEC-TTSCBC-CSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEE
T ss_pred CCCCCCceecccCcEEEEEC-ccCCCC-CCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEE
Confidence 23347899999999999999 777652 335699999999999999999999999999933 799999 9999
Q ss_pred ecC
Q 010568 505 EQL 507 (507)
Q Consensus 505 d~d 507 (507)
|+|
T Consensus 407 ~~d 409 (620)
T 4dg8_A 407 DEQ 409 (620)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 22
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=4.6e-56 Score=494.35 Aligned_cols=422 Identities=24% Similarity=0.311 Sum_probs=330.9
Q ss_pred CCCCCCCceeecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHH
Q 010568 18 GGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRT 97 (507)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~ 97 (507)
.+.+..+.+|++.... ...+...|+.++|+++++++||++|+++. +.. +++||+||.++++++|++|++
T Consensus 39 ~~~~~~~~~~~~~~~~----~~~p~~~tl~~~l~~~a~~~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~L~~ 107 (979)
T 3tsy_A 39 SNNNNSDVIFRSKLPD----IYIPNHLSLHDYIFQNISEFATKPCLING---PTG----HVYTYSDVHVISRQIAANFHK 107 (979)
T ss_dssp ------CCCBCCSSCC----CCCCTTSCHHHHHTTTGGGTTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCceeecCCCC----CCCCCCCCHHHHHHHHHHhCCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHHHHH
Confidence 3344556677776433 22345689999999999999999999864 322 579999999999999999999
Q ss_pred CCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccE
Q 010568 98 CGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKT 177 (507)
Q Consensus 98 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 177 (507)
+|+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++......+...... .. ..
T Consensus 108 ~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~-~~ 184 (979)
T 3tsy_A 108 LGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQND--DG-VV 184 (979)
T ss_dssp TTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHT--SC-CE
T ss_pred cCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhc--CC-ce
Confidence 9999999999999999999999999999999999999999999999999999999999998765544332211 11 23
Q ss_pred EEEecCCChhhHHHHhhcCceEeeHHHHHhcccc--CCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhh
Q 010568 178 IVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGEN--KQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVK 255 (507)
Q Consensus 178 v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~ 255 (507)
++.++..... ........++++...... .........++++++|+|||||||.||+|+++|+++...+....
T Consensus 185 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 258 (979)
T 3tsy_A 185 IVCIDDNESV------PIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV 258 (979)
T ss_dssp EEECCCCTTS------CCCTTEEEGGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHH
T ss_pred EEEeCCcccc------cCCcccccHHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHH
Confidence 4444432110 001124456665543322 12223345789999999999999999999999999998876632
Q ss_pred hhhhhccccCCCCcEEEEecChHHHHHHHH-HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHH
Q 010568 256 CLLESVNEKLTSEDVYVSYLPLAHIFDRAI-EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLN 333 (507)
Q Consensus 256 ~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~ 333 (507)
... ...+.+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|+++++|+++..+++...
T Consensus 259 ~~~-~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 337 (979)
T 3tsy_A 259 DGE-NPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSE 337 (979)
T ss_dssp CSS-SCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGG
T ss_pred Hhh-cccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCcc
Confidence 211 11335788999999999999999965 6788999999999876 99999999999999999999999998865211
Q ss_pred HhhhccchhHHHHHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCc
Q 010568 334 QKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAH 412 (507)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~ 412 (507)
. ...+ .++||.+++||+++++++.+++++.+ +++
T Consensus 338 ~-------------------------------------~~~~--------l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 372 (979)
T 3tsy_A 338 T-------------------------------------EKYD--------LSSIRVVKSGAAPLGKELEDAVNAKFPNAK 372 (979)
T ss_dssp G-------------------------------------GTSC--------CTTCCEEEESSCCCCSSHHHHHHHHCTTCE
T ss_pred c-------------------------------------cCCC--------ccceEEEEEcCCCCCHHHHHHHHHHCCCCe
Confidence 1 1111 13899999999999999999999988 899
Q ss_pred EEeecccccCccceeccC----CCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhh
Q 010568 413 VLQGYGLTETCAGTFVSL----PNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLT 488 (507)
Q Consensus 413 v~~~YG~tE~~~~~~~~~----~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~ 488 (507)
+++.||+||++.+++... .......+++|+|+||++++|+|.++++. ++.|+.|||+|+|++++.|||++|+.|
T Consensus 373 l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~--~~~g~~GEl~i~g~~v~~GY~~~p~~t 450 (979)
T 3tsy_A 373 LGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDS--LSRNQPGEICIRGHQIMKGYLNNPAAT 450 (979)
T ss_dssp EEECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCB--CCTTCCEEEEEESTTSCSEETTCHHHH
T ss_pred EEeeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCC--CCCCCccEEEEECCCccccccCChhhh
Confidence 999999999998765542 12233458999999999999999333444 445699999999999999999999999
Q ss_pred hhhc-ccCceeec-cEEEecC
Q 010568 489 KEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 489 ~~~~-~dgw~~TG-lg~~d~d 507 (507)
++.| .+|||+|| +|++|+|
T Consensus 451 ~~~f~~~g~~~TGDl~~~~~d 471 (979)
T 3tsy_A 451 AETIDKDGWLHTGDIGLIDDD 471 (979)
T ss_dssp HHHBCTTSCEEEEEEEEECTT
T ss_pred hhhccCCCcEEcCCEEEEcCC
Confidence 9999 79999999 9999986
No 23
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=1.2e-55 Score=457.78 Aligned_cols=373 Identities=18% Similarity=0.251 Sum_probs=310.4
Q ss_pred CCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEeCCchhhHHHHHH
Q 010568 44 ESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTC-GVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 44 ~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
+|+.++|+++++++||++|+++. + +++||+||.++++++|++|++. |.++|++|+++++|++++++++||
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA 71 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQ----G-----QSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLG 71 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCeEEEcC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHH
Confidence 47999999999999999999864 2 5799999999999999999984 888999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEeeH
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSW 202 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 202 (507)
|+++|++++|+++.++.+++.++++.++++++|++...... ... . ......+
T Consensus 72 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~---~~~---~----------------------~~~~~~~ 123 (511)
T 3e7w_A 72 SVKAGHPYIPVDLSIPSERIAKIIESSGAELLIHAAGLSID---AVG---Q----------------------QIQTVSA 123 (511)
T ss_dssp HHHHTCCEEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTT---CCC---C----------------------SSCEEEH
T ss_pred HHHhCCEEEecCCCChHHHHHHHHHhCCCCEEEecccccch---hcc---c----------------------ccceecH
Confidence 99999999999999999999999999999999997543211 000 0 0123455
Q ss_pred HHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010568 203 DEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFD 282 (507)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 282 (507)
+++...............++++++|+|||||||.||+|.++|.++...+..+...+ ++..+|++++.+|++|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 198 (511)
T 3e7w_A 124 EELLENEGGSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADF-----PVSGGKIFLNQAPFSFDLS 198 (511)
T ss_dssp HHHHTSCSCCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHS-----TTTTTCEEEECSCTTSTHH
T ss_pred hhhhccccCCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCccceEEEeCCccHHHH
Confidence 56655433222223345678999999999999999999999999999888855444 7889999999999999999
Q ss_pred HHHHHHHHHcCCEEEEecC----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhh
Q 010568 283 RAIEEVFISNGAAIGFWRG----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNL 358 (507)
Q Consensus 283 ~~~~~~~l~~G~~v~l~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 358 (507)
+..++.++..|+++++.+. ++..+++.++++++|+++++|++++.++....
T Consensus 199 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------- 253 (511)
T 3e7w_A 199 VMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPG------------------------- 253 (511)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTT-------------------------
T ss_pred HHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccc-------------------------
Confidence 8888999999999998864 88999999999999999999999998754110
Q ss_pred hcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecccccCccceeccCCCC----
Q 010568 359 KKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYGLTETCAGTFVSLPNE---- 433 (507)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~---- 433 (507)
.... ..+++|.+++||+++++++.+.+.+.+ ++++++.||+||+++.++......
T Consensus 254 ------------~~~~--------~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 313 (511)
T 3e7w_A 254 ------------FSQD--------LLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITNDVIS 313 (511)
T ss_dssp ------------CSTT--------TCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECHHHHT
T ss_pred ------------cccc--------cCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccccccc
Confidence 0000 113799999999999999999999988 899999999999988766543321
Q ss_pred CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc--ccC--ceeec-cEEEec
Q 010568 434 MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM--VDG--WFHTG-MGVWEQ 506 (507)
Q Consensus 434 ~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~--~dg--w~~TG-lg~~d~ 506 (507)
.....++|+|+||++++|+| ++++.++ .|+.|||+|+||+++.|||++|+.+++.| .+| ||+|| +|++++
T Consensus 314 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~--~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~~d 388 (511)
T 3e7w_A 314 RSESLPVGFAKPDMNIFIMD-EEGQPLP--EGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFIQD 388 (511)
T ss_dssp TCSSCCCBEECTTCEEEEEC-TTSCBCC--TTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEEET
T ss_pred cCCcCCCcceeCCCEEEEEC-CCCCCCC--CCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEccC
Confidence 12336799999999999999 8776555 45999999999999999999999999999 345 89999 999963
No 24
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=7e-56 Score=459.72 Aligned_cols=373 Identities=19% Similarity=0.205 Sum_probs=304.2
Q ss_pred CCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHH
Q 010568 44 ESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEAC 123 (507)
Q Consensus 44 ~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 123 (507)
+|+.++|+++++++||++|+++. + +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~ 71 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWR---D------AKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGC 71 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCceEEEeC---C------ceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 47999999999999999999864 3 57999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEeeHH
Q 010568 124 NALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWD 203 (507)
Q Consensus 124 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (507)
+++|++++|++|.++.+++.++++.++++++|++...... . .. ..++..+ .+.
T Consensus 72 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~-------~-~~-~~~~~~~------------------~~~ 124 (512)
T 3fce_A 72 VKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSATAVTVT-------D-LP-VRIVSED------------------NLK 124 (512)
T ss_dssp HHTTCCEEEEETTSCHHHHHHHHHHSCCCEEEESSCCCSS-------C-CS-SEEEETH------------------HHH
T ss_pred HHhCCEEEeeCCCCcHHHHHHHHHhcCCCEEEecCccccc-------c-cc-cceechh------------------hhh
Confidence 9999999999999999999999999999999997543211 0 00 1111100 122
Q ss_pred HHHhcc-ccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010568 204 EFLQLG-ENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFD 282 (507)
Q Consensus 204 ~l~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 282 (507)
++.... ...........++++++|+|||||||.||+|+++|.++.+.+......+ ++..+|++++.+|++|.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 199 (512)
T 3fce_A 125 DIFFTHKGNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDF-----NLQTGQVFLNQAPFSFDLS 199 (512)
T ss_dssp HHHHHTTTCCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHT-----TCCSSCEEEECSCTTSGGG
T ss_pred hhcccccccCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHhHH
Confidence 222111 1112223345789999999999999999999999999999888855544 7889999999999999999
Q ss_pred HHHHHHHHHcCCEEEEecC----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhh
Q 010568 283 RAIEEVFISNGAAIGFWRG----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNL 358 (507)
Q Consensus 283 ~~~~~~~l~~G~~v~l~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 358 (507)
+..++.+++.|+++++.+. ++..+++.++++++|+++++|++++.++....
T Consensus 200 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------- 254 (512)
T 3fce_A 200 VMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEAS------------------------- 254 (512)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTT-------------------------
T ss_pred HHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhcc-------------------------
Confidence 8888999999999999864 89999999999999999999999988753110
Q ss_pred hcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecccccCccceeccCCCCC---
Q 010568 359 KKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYGLTETCAGTFVSLPNEM--- 434 (507)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~--- 434 (507)
.... ..+++|.+++||+++++++.+.+.+.+ ++++++.||+||+++.++.......
T Consensus 255 ------------~~~~--------~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 314 (512)
T 3fce_A 255 ------------FSES--------MLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLD 314 (512)
T ss_dssp ------------CSTT--------TSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHHHHH
T ss_pred ------------ccch--------hCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEecccccc
Confidence 0000 114899999999999999999999988 8999999999999887765443321
Q ss_pred -ccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcc----cCceeec-cEEEe
Q 010568 435 -SMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMV----DGWFHTG-MGVWE 505 (507)
Q Consensus 435 -~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~----dgw~~TG-lg~~d 505 (507)
....++|+|+++++++|+| +++..++. |+.|||+|+||+++.|||++|+.+++.|. +|||+|| +|+++
T Consensus 315 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~--g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~~ 388 (512)
T 3fce_A 315 QYKSLPVGYCKSDCRLLIMK-EDGTIAPD--GEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYVE 388 (512)
T ss_dssp HCSSCCCEEECTTCEEEEEC-SSSCBCCT--TSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEEE
T ss_pred ccCCCccccccCCcEEEEEC-CCCCCCCC--CCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEec
Confidence 2347899999999999999 87776654 59999999999999999999999999982 5699999 99984
No 25
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=1.4e-55 Score=458.52 Aligned_cols=375 Identities=18% Similarity=0.168 Sum_probs=306.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
+.|+.++|+++++++||++|+.+. + +++||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 3 ~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 73 (521)
T 3l8c_A 3 LKDMIDSIEQFAQTQADFPVYDCL----G-----ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVA 73 (521)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCcceecC----C-----CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 578999999999999999999864 3 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEeeH
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSW 202 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 202 (507)
|+++|++++|++|.++.+++.++++.++++++|++++....+ ... ....+
T Consensus 74 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~--------~~~----------------------~~~~~ 123 (521)
T 3l8c_A 74 LTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTI--------EGI----------------------SLVSL 123 (521)
T ss_dssp HHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCC--------TTS----------------------EEEEH
T ss_pred HHHhCCEEEecCccccHHHHHHHHHhCCCCEEEecCcccccc--------ccC----------------------cccch
Confidence 999999999999999999999999999999999987643211 111 12233
Q ss_pred HHHHhccc--cCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHH
Q 010568 203 DEFLQLGE--NKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHI 280 (507)
Q Consensus 203 ~~l~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 280 (507)
.++..... ..........++++++|+|||||||.||+|.++|.++.+....+... ........+++++..|++|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~ 200 (521)
T 3l8c_A 124 SEIESAKLAEMPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIED---AAFDVPKQPQMLAQPPYSFD 200 (521)
T ss_dssp HHHHHHHHHTCCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHC---TTTCCCSSCEEECCSCTTSG
T ss_pred hhhhhcccccCCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhc---cccCCCCCCeEEecCCccHH
Confidence 33322111 11122334578999999999999999999999999999877764332 12467889999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEecC----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHh
Q 010568 281 FDRAIEEVFISNGAAIGFWRG----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFH 356 (507)
Q Consensus 281 ~g~~~~~~~l~~G~~v~l~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (507)
.++..++.++..|+++++.+. ++..+++.+.++++|++.++|+++..++....
T Consensus 201 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------------- 257 (521)
T 3l8c_A 201 LSVMYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDD----------------------- 257 (521)
T ss_dssp GGHHHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTT-----------------------
T ss_pred HHHHHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhc-----------------------
Confidence 888888889999999998764 88999999999999999999999988753100
Q ss_pred hhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh-CCcEEeecccccCccceeccCCCC--
Q 010568 357 NLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA-CAHVLQGYGLTETCAGTFVSLPNE-- 433 (507)
Q Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~-- 433 (507)
.... ..+++|.+++||+++++++.+.+.+.+ ++++++.||+||+++.++......
T Consensus 258 --------------~~~~--------~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~ 315 (521)
T 3l8c_A 258 --------------FCQA--------KMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREM 315 (521)
T ss_dssp --------------CSTT--------TCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHHH
T ss_pred --------------cccc--------cCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeeccccc
Confidence 0000 013799999999999999999999888 899999999999988766543322
Q ss_pred --CccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc----ccCceeec-cEEEec
Q 010568 434 --MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM----VDGWFHTG-MGVWEQ 506 (507)
Q Consensus 434 --~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~----~dgw~~TG-lg~~d~ 506 (507)
.....++|+|+||++++|+| +++..++. |+.|||+|+||+++.|||++|+.+++.| .+|||+|| +|++|+
T Consensus 316 ~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~--g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~ 392 (521)
T 3l8c_A 316 VDNYTRLPIGYPKPDSPTYIID-EDGKELSS--GEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTE 392 (521)
T ss_dssp HHHCSSCEEEEECTTSCEEEEC-TTSCBCCT--TCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECS
T ss_pred ccCCCccccccccCCCEEEEEC-CCcCCCCC--CCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeC
Confidence 12346899999999999999 87776554 5999999999999999999999999998 35799999 999998
Q ss_pred C
Q 010568 507 L 507 (507)
Q Consensus 507 d 507 (507)
|
T Consensus 393 d 393 (521)
T 3l8c_A 393 D 393 (521)
T ss_dssp S
T ss_pred C
Confidence 6
No 26
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=6.5e-55 Score=460.72 Aligned_cols=390 Identities=19% Similarity=0.216 Sum_probs=309.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHH
Q 010568 41 PGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM 120 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 120 (507)
....|+.++|+++++++||++|+++. ++ +..+++||+||.++++++|++|+++|+++||+|+++++|++++++++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~---~~--~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 82 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFL---NK--ELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAF 82 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEE---ET--TEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEE---cC--CeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Confidence 45689999999999999999999986 42 23378999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeccCCC---ChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCc
Q 010568 121 EACNALGLHCVPLYDTL---GAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGL 197 (507)
Q Consensus 121 lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 197 (507)
|||+++|++++|++|.. +.+++.++++.++++++|++.+....+........+....+.
T Consensus 83 lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~------------------ 144 (590)
T 3kxw_A 83 LGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIP------------------ 144 (590)
T ss_dssp HHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEE------------------
T ss_pred HHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccccccc------------------
Confidence 99999999999999988 457899999999999999987655544332211111111111
Q ss_pred eEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecCh
Q 010568 198 AVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPL 277 (507)
Q Consensus 198 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 277 (507)
....+++.... ..........++++++|+|||||||.||+|+++|.+++..+......+ ++..+|++++++|+
T Consensus 145 -~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~ 217 (590)
T 3kxw_A 145 -AIALESIELNR-SSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSF-----HMNDETIIFSWLPP 217 (590)
T ss_dssp -EEEGGGCCGGG-GGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCT
T ss_pred -eeechhccccc-cccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhh-----CCCCcCeEEEecCC
Confidence 11122211111 112223455789999999999999999999999999999998865544 78899999999999
Q ss_pred HHHHHHHH-HHHHHHcCCEEEEecC-----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 010568 278 AHIFDRAI-EEVFISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAY 351 (507)
Q Consensus 278 ~h~~g~~~-~~~~l~~G~~v~l~~~-----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 351 (507)
+|.+++.. ++.+++.|+++++.+. ++..+++.|+++++|++.++|.++..+++.+.....
T Consensus 218 ~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~-------------- 283 (590)
T 3kxw_A 218 HHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKK-------------- 283 (590)
T ss_dssp TSHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGG--------------
T ss_pred CcchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhc--------------
Confidence 99999986 7889999999998764 789999999999999999999999988664221110
Q ss_pred HhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhC------CcEEeecccccCccc
Q 010568 352 SYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVAC------AHVLQGYGLTETCAG 425 (507)
Q Consensus 352 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~------~~v~~~YG~tE~~~~ 425 (507)
... ..+++|.+++||+++++++.+.+.+.++ .++++.||+||++++
T Consensus 284 --------------------~~~--------~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~ 335 (590)
T 3kxw_A 284 --------------------EGL--------DLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLL 335 (590)
T ss_dssp --------------------TTC--------CCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSE
T ss_pred --------------------cCC--------CchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCccccccccccccccce
Confidence 000 1148999999999999999999998873 479999999999988
Q ss_pred eeccCCC--------------------------CCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccc
Q 010568 426 TFVSLPN--------------------------EMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFS 479 (507)
Q Consensus 426 ~~~~~~~--------------------------~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~ 479 (507)
++..... ......++|+|+++ ++|+| +++. .+++.|+.|||+|+||+++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d-~~~~-~~~~~g~~GEl~v~g~~v~~ 411 (590)
T 3kxw_A 336 VTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIID-PDTL-IPCDFDQVGEIWVQSNSVAK 411 (590)
T ss_dssp EEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEEC-TTTC-CBCCTTBCEEEEEESTTSCC
T ss_pred eecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEc-CCCC-cCCCCCCEEEEEEeCCcccc
Confidence 7754321 11224689999998 88888 5532 34456699999999999999
Q ss_pred cccCChhhhhhhccc-------C--ceeec-cEEEec
Q 010568 480 GYYKREDLTKEVMVD-------G--WFHTG-MGVWEQ 506 (507)
Q Consensus 480 gY~~~~~~~~~~~~d-------g--w~~TG-lg~~d~ 506 (507)
|||++|+.|+++|.+ | ||+|| +|++|+
T Consensus 412 GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~dd 448 (590)
T 3kxw_A 412 GYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLHE 448 (590)
T ss_dssp CBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEET
T ss_pred cccCChhHHHHHHhccccCCCCCCcEEecCcEEEEEC
Confidence 999999999999943 5 99999 999994
No 27
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=1.4e-54 Score=457.13 Aligned_cols=394 Identities=18% Similarity=0.235 Sum_probs=314.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCC
Q 010568 33 KDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVN 112 (507)
Q Consensus 33 ~~~~~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n 112 (507)
...++...+.+.|+.++|+++++++|+.+++.. ..+..+++||+||.++++++|++|+++|+++||+|+|+++|
T Consensus 10 ~~~~~~~~~~~~tl~~~l~~~a~~~p~~~~~~~------~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~ 83 (576)
T 3gqw_A 10 THSLPMRYADFPTLVDALDYAALSSAGMNFYDR------RCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAET 83 (576)
T ss_dssp ----CCCCSCCSSHHHHHHHHTTSSCEEEEECT------TSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCS
T ss_pred cCCCCcccCCCCcHHHHHHHHhhCCCCeEEeCC------CCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 456777778899999999999999999777643 22233789999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhcCCEEeeccCCCC-------hHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCC
Q 010568 113 CPEWIIGMEACNALGLHCVPLYDTLG-------AGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVK 185 (507)
Q Consensus 113 ~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 185 (507)
++++++++|||+++|++++|+++.++ .+++.++++.++++++|++.+....+....... +... +
T Consensus 84 ~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~-~------- 154 (576)
T 3gqw_A 84 SSEFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDN-PELH-V------- 154 (576)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGC-TTCE-E-------
T ss_pred cHHHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccC-Ccce-e-------
Confidence 99999999999999999999999998 789999999999999999987665544332211 1111 1
Q ss_pred hhhHHHHhhcCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccC
Q 010568 186 PEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKL 265 (507)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~ 265 (507)
..... ...............++++++|+|||||||.||+|+++|.++...+..+... ..++
T Consensus 155 --------------~~~~~-~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~ 215 (576)
T 3gqw_A 155 --------------LSHAW-FKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHD----GIKL 215 (576)
T ss_dssp --------------EEHHH-HHTSCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHT----TSCC
T ss_pred --------------cchhh-hhcccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhc----ccCC
Confidence 11111 1111112223334568999999999999999999999999999888774322 2478
Q ss_pred CCCcEEEEecChHHHHHHHH-HHHHHHcCCEEEEecC-----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhcc
Q 010568 266 TSEDVYVSYLPLAHIFDRAI-EEVFISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSG 339 (507)
Q Consensus 266 ~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~v~l~~~-----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~ 339 (507)
..+|++++++|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|.+++.+.+.+....
T Consensus 216 ~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--- 292 (576)
T 3gqw_A 216 RPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKD--- 292 (576)
T ss_dssp CTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHH---
T ss_pred CCcceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccc---
Confidence 89999999999999999876 6677999999888763 88999999999999999999999987754221110
Q ss_pred chhHHHHHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhh------CCcE
Q 010568 340 GLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVA------CAHV 413 (507)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~------~~~v 413 (507)
.. ....+++|.+++||+++++++.+.+.+.+ +..+
T Consensus 293 -------------------------------~~--------~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~ 333 (576)
T 3gqw_A 293 -------------------------------LA--------ELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTF 333 (576)
T ss_dssp -------------------------------HT--------TCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGE
T ss_pred -------------------------------cc--------cCChhhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccc
Confidence 00 11124899999999999999999999887 6789
Q ss_pred EeecccccCccceeccCCCCC---------------------------ccCCcccccccCceEEEeecCCCccccCCCCC
Q 010568 414 LQGYGLTETCAGTFVSLPNEM---------------------------SMIGTVGPPVPNVDVCLESVPEMEYDALSSTP 466 (507)
Q Consensus 414 ~~~YG~tE~~~~~~~~~~~~~---------------------------~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~ 466 (507)
++.||+||++++++....... ....++|+|+||++++|+| +++..++. |+
T Consensus 334 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~--g~ 410 (576)
T 3gqw_A 334 MPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRN-EAGMPVAE--RV 410 (576)
T ss_dssp EEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEEC-TTSCBCCT--TB
T ss_pred cccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEEC-CCCCCCCC--CC
Confidence 999999999988776543211 0113799999999999999 87776655 59
Q ss_pred CceEEEecCCccccccCChhhhhhhcccCceeec-cEEEe
Q 010568 467 RGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWE 505 (507)
Q Consensus 467 ~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d 505 (507)
.|||+|+|+.++.|||++++.+...+.+|||+|| +|+++
T Consensus 411 ~GEl~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~~ 450 (576)
T 3gqw_A 411 VGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYLL 450 (576)
T ss_dssp CEEEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEEEEEE
T ss_pred eEEEEEeCccccccccCCccccccccCCCeeeccceEEEE
Confidence 9999999999999999999998888899999999 99984
No 28
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=2.6e-54 Score=453.02 Aligned_cols=391 Identities=19% Similarity=0.157 Sum_probs=308.4
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCceeeEeeccC----cCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCch
Q 010568 39 PIPGMESCWDVFRMAVERNPNNRMLGQREIVDG----KAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCP 114 (507)
Q Consensus 39 ~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~----~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~ 114 (507)
......|+.++|+++++++||++|+++. ++ .....+++||+||.++++++|+.|++.|+ +||+|+++++|++
T Consensus 15 ~~~~~~tl~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~ 90 (562)
T 3ite_A 15 QYTSTVPPSHYIETWAKTHPEWKAVEVA---TGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSL 90 (562)
T ss_dssp ---CCCCTTHHHHHHHHHCTTSEEEEEE---ECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCH
T ss_pred eecccCCHHHHHHHHHHHCCCchhhhcc---cccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCH
Confidence 4456688999999999999999999976 32 12234789999999999999999999999 7999999999999
Q ss_pred hhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhh
Q 010568 115 EWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEK 194 (507)
Q Consensus 115 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 194 (507)
++++++|||+++|++++|++|.++.+++.++++.++++++|++.+...... ......++....
T Consensus 91 ~~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~----------- 153 (562)
T 3ite_A 91 IAFAIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVE------LPPETKVLDTKN----------- 153 (562)
T ss_dssp HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCC------CCTTCEEEETTC-----------
T ss_pred HHHHHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEccccccccc------cCccceeecccc-----------
Confidence 999999999999999999999999999999999999999999876433211 011122222111
Q ss_pred cCceEeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhh---hccccCCCCcEE
Q 010568 195 YGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLE---SVNEKLTSEDVY 271 (507)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~---~~~~~~~~~d~~ 271 (507)
..+.+...... .........++++++|+|||||||.||+|+++|.++...+..+...+. .....+...+++
T Consensus 154 -----~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (562)
T 3ite_A 154 -----QSFIENLSTQD-TSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKF 227 (562)
T ss_dssp -----HHHHHHHHHSC-CSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEE
T ss_pred -----hhhhhhccccc-ccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceE
Confidence 11222222221 112223445788999999999999999999999999888776544321 223457888999
Q ss_pred EEecChHHHHHHHHHHHHHHcCCEEEEecC--CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHH
Q 010568 272 VSYLPLAHIFDRAIEEVFISNGAAIGFWRG--DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNI 349 (507)
Q Consensus 272 l~~~pl~h~~g~~~~~~~l~~G~~v~l~~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 349 (507)
++..|++|..++..++.++..|+++++.+. .+..+++.++++++|+++++|++++.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~------------------- 288 (562)
T 3ite_A 228 LCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGL------------------- 288 (562)
T ss_dssp ECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTC-------------------
T ss_pred EEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhccc-------------------
Confidence 999999998888888889999999998764 46788899999999999999998876421
Q ss_pred HHHhHHhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceecc
Q 010568 350 AYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVS 429 (507)
Q Consensus 350 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~ 429 (507)
.+ . ..+++|.+++||+++++++.+.+++.+++++++.||+||+++.++..
T Consensus 289 ------------------~~----~--------~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~ 338 (562)
T 3ite_A 289 ------------------VP----E--------DAPHLVYLGVGGEKMTPRTQQIWSSSDRVALVNVYGPTEVTIGCSAG 338 (562)
T ss_dssp ------------------CG----G--------GSTTCCEEEEESSCCCHHHHHHHTTCSSCEEEEEECCGGGCSCSEEE
T ss_pred ------------------Cc----c--------ccCceEEEEEecCCCCHHHHHHHhhCCCcEEEEeeccchheeeeeee
Confidence 00 0 01389999999999999999999998899999999999998877766
Q ss_pred CCCCCccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcccC--ceeec-cEEEec
Q 010568 430 LPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDG--WFHTG-MGVWEQ 506 (507)
Q Consensus 430 ~~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg--w~~TG-lg~~d~ 506 (507)
........+++|+|+++++++|+| ++++ .+++.|+.|||+|+|++++.|||++|+.+...+.+| ||+|| +|++|+
T Consensus 339 ~~~~~~~~~~~G~p~~~~~~~i~d-~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d~ 416 (562)
T 3ite_A 339 RILPDSDTRCIGHPLGDSVAHVLA-PGSN-EHVKKGMAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMDA 416 (562)
T ss_dssp ECCTTSCTTEEEEECTTCEEEEEC-TTSS-CBCCTTSCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEEEEECT
T ss_pred eecCCCCCccccccCCCCeEEEEe-CCCC-CCCCCCCceEEEEeccccchhhCCCccccccccCCCCEEEecCCEEEEcC
Confidence 555444558999999999999999 5443 334566999999999999999999999988777666 99999 999998
Q ss_pred C
Q 010568 507 L 507 (507)
Q Consensus 507 d 507 (507)
|
T Consensus 417 d 417 (562)
T 3ite_A 417 D 417 (562)
T ss_dssp T
T ss_pred C
Confidence 6
No 29
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-55 Score=454.04 Aligned_cols=383 Identities=21% Similarity=0.253 Sum_probs=299.0
Q ss_pred CHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHH
Q 010568 45 SCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACN 124 (507)
Q Consensus 45 tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 124 (507)
||.++|+++++++||++|+++. + +++||+||.++++++|++|++. +||+|+|+++|+++++++++||+
T Consensus 2 tl~~~l~~~a~~~pd~~Al~~~---~------~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~ 69 (501)
T 3ipl_A 2 SLDFWLYKQAQQNGHHIAITDG---Q------ESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACW 69 (501)
T ss_dssp -CCCHHHHHHHHHTTSEEEECS---S------CEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCceEEEeC---C------cEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHH
Confidence 6778999999999999999864 3 4799999999999999999987 89999999999999999999999
Q ss_pred hcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceE-eeHH
Q 010568 125 ALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAV-YSWD 203 (507)
Q Consensus 125 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~ 203 (507)
++|++++|+++.++.+++.++++.++++++|++.+........... ..+..+.......... ........ ...+
T Consensus 70 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 144 (501)
T 3ipl_A 70 LANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSL--DDIEFAGRDITTNGLL---DNTMGIQYDTSNE 144 (501)
T ss_dssp HTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEET--TC------------------------------
T ss_pred HcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcccccccccccccc--ccceeeeeeccccccc---ccccccccccchh
Confidence 9999999999999999999999999999999987654332111100 1111110000000000 00000000 0011
Q ss_pred HHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHH
Q 010568 204 EFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDR 283 (507)
Q Consensus 204 ~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 283 (507)
.+...............++++++|+|||||||.||+|.++|.++...+..+...+ ++..+|++++.+|++|.+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 219 (501)
T 3ipl_A 145 TVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESL-----GFDRDTNWLSVLPIYHISGL 219 (501)
T ss_dssp -----CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHT-----CCCTTCEEEECSCTTSHHHH
T ss_pred hccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhh-----CCCccCEEEEeCcHHHHHHH
Confidence 1111111111122345789999999999999999999999999999888855444 78899999999999999999
Q ss_pred HHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhhhcCC
Q 010568 284 AIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGH 362 (507)
Q Consensus 284 ~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 362 (507)
..++.++..|+++++.+. ++..+++.|+++++|+++++|++++.+++.....
T Consensus 220 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--------------------------- 272 (501)
T 3ipl_A 220 SVLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHE--------------------------- 272 (501)
T ss_dssp HHHHHHHHHTCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCS---------------------------
T ss_pred HHHHHHHHcCceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCC---------------------------
Confidence 888899999999999876 9999999999999999999999999986521000
Q ss_pred CCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCC-CccCCccc
Q 010568 363 KHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNE-MSMIGTVG 441 (507)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-~~~~~s~G 441 (507)
..++|.+++||+++++++.+.+.+ +++++++.||+||+++.++...... ....+++|
T Consensus 273 ---------------------~~~lr~i~~gG~~l~~~~~~~~~~-~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G 330 (501)
T 3ipl_A 273 ---------------------PYNLQKILLGGAKLSATMIETALQ-YNLPIYNSFGMTETCSQFLTATPEMLHARPDTVG 330 (501)
T ss_dssp ---------------------CTTCCEEEECSSCCCHHHHHHHHH-TTCCEEEEEEEGGGTEEEEEECHHHHHHCTTCCB
T ss_pred ---------------------cCcccEEEEeCCCCCHHHHHHHHH-hCCCEeccccccccccceeecCccccccCCCCCC
Confidence 026899999999999999999987 5899999999999987655544322 23457899
Q ss_pred ccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 442 PPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 442 ~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
+|++|++++|+| ++ .++.|||+|+|+.++.|||++++.+.. |.+|||+|| +|++|+|
T Consensus 331 ~p~~~~~~~i~d-~~-------~~~~GEl~v~g~~~~~gY~~~~~~t~~-~~~g~~~TGDl~~~~~~ 388 (501)
T 3ipl_A 331 MPSANVDVKIKN-PN-------KEGHGELMIKGANVMNGYLYPTDLTGT-FENGYFNTGDIAEIDHE 388 (501)
T ss_dssp EECTTCEEEEES-CC-------SSCCEEEEEESTTSCSCCSBSTTCCCS-EETTEEEEEEEEEECTT
T ss_pred CCCCCcEEEEec-CC-------CCCccEEEEeccchhhhhCcChhhcch-hcCCceecCCEEEEcCC
Confidence 999999999999 54 346899999999999999999999887 899999999 9999976
No 30
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=2.5e-55 Score=454.11 Aligned_cols=371 Identities=25% Similarity=0.328 Sum_probs=297.1
Q ss_pred CCCCCHHHHHHHHHHhCCC-CCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHH
Q 010568 41 PGMESCWDVFRMAVERNPN-NRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIG 119 (507)
Q Consensus 41 ~~~~tl~~~l~~~~~~~pd-~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~ 119 (507)
..+.|+.+.|.++++++|+ ++|+++. + +++||+||.++++++|+.|. .|++|+++++|+++++++
T Consensus 19 ~~~~tl~~~l~~~a~~~p~d~~Al~~~----~-----~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~ 84 (505)
T 3nyq_A 19 SHMSSLFPALSPAPTGAPADRPALRFG----E-----RSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVA 84 (505)
T ss_dssp -----CCTTTSSCCCSGGGGSEEEEET----T-----EEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHH
T ss_pred cccchhHHHHHHHHHhCCCCCeEEEEC----C-----eeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHH
Confidence 4578899999999999987 9999864 2 67999999999999998774 388999999999999999
Q ss_pred HHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceE
Q 010568 120 MEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAV 199 (507)
Q Consensus 120 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 199 (507)
++||+++|++++|++|.++.+++.+++++++++++|++.+... ......+..+ .++..
T Consensus 85 ~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~------~~~~~~~~~~-~~~~~--------------- 142 (505)
T 3nyq_A 85 VVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAEL------PPALGALERV-DVDVR--------------- 142 (505)
T ss_dssp HHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCC------CGGGTTSEEE-ECCTT---------------
T ss_pred HHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCcccc------chhhcccccc-ccccc---------------
Confidence 9999999999999999999999999999999999999865211 0000111111 11110
Q ss_pred eeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHH
Q 010568 200 YSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAH 279 (507)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 279 (507)
...........++++++|+|||||||.||+|+++|.++...+..+...+ ++..+|++++.+|++|
T Consensus 143 ----------~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~ 207 (505)
T 3nyq_A 143 ----------ARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW-----QWTGEDVLVQGLPLFH 207 (505)
T ss_dssp ----------CCCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECCCTTS
T ss_pred ----------cccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh-----CCCCCcEEEEeccHHH
Confidence 0011222345678999999999999999999999999999998866555 7889999999999999
Q ss_pred HHHHHH-HHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhh
Q 010568 280 IFDRAI-EEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHN 357 (507)
Q Consensus 280 ~~g~~~-~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (507)
..++.. ++.++..|+++++.+. ++..+++.+ ++++|+++++|+++..+++.+....
T Consensus 208 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~--------------------- 265 (505)
T 3nyq_A 208 VHGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADP--------------------- 265 (505)
T ss_dssp HHHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCH---------------------
T ss_pred HHHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCc---------------------
Confidence 999875 7889999999998876 899999999 8899999999999999876422110
Q ss_pred hhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCccC
Q 010568 358 LKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMI 437 (507)
Q Consensus 358 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~ 437 (507)
....++ +++|.+++||+++++++.+++.+.+++++++.||+||++..++...... ...
T Consensus 266 -------------~~~~~l--------~~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~ 323 (505)
T 3nyq_A 266 -------------ELAKAL--------AGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTSVRADGE-PRA 323 (505)
T ss_dssp -------------HHHHHH--------HHCSEEEECSSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECCTTSC-CCT
T ss_pred -------------hhhccc--------ccceEEEECCCCCCHHHHHHHHHhcCCeeecccchhhcccccccCCCCC-CCC
Confidence 001112 2789999999999999999999989999999999999987766554433 345
Q ss_pred CcccccccCceEEEeecCCCccccC-CCCCCceEEEecCCccccccCChhhhhhhc-ccCceeec-cEEEecC
Q 010568 438 GTVGPPVPNVDVCLESVPEMEYDAL-SSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQL 507 (507)
Q Consensus 438 ~s~G~p~pg~~i~ivd~~~~~~~~~-~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~d 507 (507)
+++|+|+||++++|+| +++..++. +.|+.|||+|+|++++.|||++|+.++++| .||||+|| +|++|+|
T Consensus 324 ~~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~d 395 (505)
T 3nyq_A 324 GTVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPD 395 (505)
T ss_dssp TCCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTT
T ss_pred CCcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCC
Confidence 8999999999999999 88877665 346899999999999999999999999999 79999999 9999976
No 31
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-52 Score=476.18 Aligned_cols=373 Identities=20% Similarity=0.250 Sum_probs=307.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHH
Q 010568 43 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEA 122 (507)
Q Consensus 43 ~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 122 (507)
..++.++|+++++++||++|+++. + +++||+||.++++++|+.|++.|+++|++|+|+++|++++++++||
T Consensus 463 ~~~l~~~~~~~~~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 533 (1304)
T 2vsq_A 463 TKPLTYWFKEAVNANPDAPALTYS---G------QTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILG 533 (1304)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEESS---S------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEC---C------eeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHH
Confidence 378999999999999999999864 3 4699999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEeeH
Q 010568 123 CNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSW 202 (507)
Q Consensus 123 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 202 (507)
|+++|++++|++|.++.+++.+++++++++++|++.+........ +.....+.+++..
T Consensus 534 ilkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~~~~~~~~~~~----------------- 591 (1304)
T 2vsq_A 534 VLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAEL-----PYTGTTLFIDDQT----------------- 591 (1304)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTC-----CCCSEEEESSCGG-----------------
T ss_pred HHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhcc-----CCCCcEEEecccc-----------------
Confidence 999999999999999999999999999999999987644322111 1122333333210
Q ss_pred HHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHH
Q 010568 203 DEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFD 282 (507)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 282 (507)
.+ .. ..........++++++|+|||||||.||||+++|+++.+. .. ......+..+|++++..|++|..+
T Consensus 592 -~~-~~--~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~-----~~~~~~~~~~d~~l~~~~~~fd~~ 661 (1304)
T 2vsq_A 592 -RF-EE--QASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VK-----HVDYMAFSDQDTFLSVSNYAFDAF 661 (1304)
T ss_dssp -GG-GS--CSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HS-----SCCSSCCCTTCEEEECSCTTSTHH
T ss_pred -cc-cc--ccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HH-----HHHhcCCCCCCEEEEECCccHHHH
Confidence 00 00 1111223457899999999999999999999999999875 33 223447889999999999999888
Q ss_pred HHHHHHHHHcCCEEEEecC----CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhh
Q 010568 283 RAIEEVFISNGAAIGFWRG----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNL 358 (507)
Q Consensus 283 ~~~~~~~l~~G~~v~l~~~----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 358 (507)
...++.++..|+++++.+. ++..+++.|.++++|+++++|++++.+.+...
T Consensus 662 ~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~------------------------- 716 (1304)
T 2vsq_A 662 TFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGE------------------------- 716 (1304)
T ss_dssp HHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCS-------------------------
T ss_pred HHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhch-------------------------
Confidence 8888999999999999864 89999999999999999999999998864200
Q ss_pred hcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhC-CcEEeecccccCccceeccCCCC---C
Q 010568 359 KKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVAC-AHVLQGYGLTETCAGTFVSLPNE---M 434 (507)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~~---~ 434 (507)
. .+ +++|.+++|||+++.++.+.+.+.++ .+++|.||+||++..++...... .
T Consensus 717 -------------~--~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 773 (1304)
T 2vsq_A 717 -------------D--WM--------KGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDS 773 (1304)
T ss_dssp -------------H--HH--------HTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSS
T ss_pred -------------h--cC--------CCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCcccc
Confidence 0 01 27999999999999999999888774 78999999999998776554322 2
Q ss_pred ccCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhc-c------cCceeec-cEEEec
Q 010568 435 SMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-V------DGWFHTG-MGVWEQ 506 (507)
Q Consensus 435 ~~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~------dgw~~TG-lg~~d~ 506 (507)
....++|+|++|++++|+| ++++.+|. |+.|||+|+|+++++||+|+|+.|+++| . ++||+|| +|++|+
T Consensus 774 ~~~~~iG~p~~~~~~~i~d-~~~~~~p~--G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~ 850 (1304)
T 2vsq_A 774 ISSLPIGKPISNASVYILN-EQSQLQPF--GAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLP 850 (1304)
T ss_dssp CSSCCCBEECTTEEEEEEC-TTSCBCCT--TCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECT
T ss_pred CCCCCCceeeCCCEEEEEC-CCcCCCCC--CCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcC
Confidence 2346899999999999999 87766555 5999999999999999999999999999 3 3499999 999998
Q ss_pred C
Q 010568 507 L 507 (507)
Q Consensus 507 d 507 (507)
|
T Consensus 851 d 851 (1304)
T 2vsq_A 851 D 851 (1304)
T ss_dssp T
T ss_pred C
Confidence 6
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.98 E-value=3.5e-32 Score=267.83 Aligned_cols=205 Identities=18% Similarity=0.146 Sum_probs=172.5
Q ss_pred CCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEec
Q 010568 221 KNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWR 300 (507)
Q Consensus 221 ~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~ 300 (507)
.+++++|+|||||||.||+|++||+++.+++..+...+ +++++|++++.+|++|.+|+..++.++..|+++++.+
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~ 110 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKAL-----SLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTE 110 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecC
Confidence 46899999999999999999999999999988865544 7899999999999999999998889999999999886
Q ss_pred CCHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHhhhhcCCCCCCCchhhhHHhHHHHH
Q 010568 301 GDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVK 380 (507)
Q Consensus 301 ~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 380 (507)
. ....++.++++++|+++++|++++.+++.... ..++
T Consensus 111 ~-~~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~~--------------------------------------~~~l---- 147 (358)
T 4gs5_A 111 P-TANPLAGLDHADFDFVAMVPMQLQSILENSAT--------------------------------------SGQV---- 147 (358)
T ss_dssp C-CSCTTTTCSSCCCSEEEECHHHHHHHHHCTTT--------------------------------------GGGG----
T ss_pred c-cccHHHHHHHhCCeEEEcChHHHHHhhccccc--------------------------------------cccC----
Confidence 4 22346789999999999999999998652110 0011
Q ss_pred HHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCccCCcccccccCceEEEeecCCCccc
Q 010568 381 QSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYD 460 (507)
Q Consensus 381 ~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~s~G~p~pg~~i~ivd~~~~~~~ 460 (507)
++||.+++||+++++++.+++++ +++++++.||+||+++.++....+.... +++|.+.||+++.+.+
T Consensus 148 ----~~lr~v~~gG~~l~~~~~~~~~~-~~~~~~~~YG~TEt~~~~~~~~~~~~~~-g~~~~~~pgv~~~~~~------- 214 (358)
T 4gs5_A 148 ----DRLGKVLLGGAPVNHALAMQISD-LAMPVYQSYGMTETVSHVALKALNGPEA-SELYVFLPGIQYGVDE------- 214 (358)
T ss_dssp ----GGGCSEEECSSCCCHHHHHHHHT-CSSCEEEEEECGGGSSEEEEEECSSTTC-CSCEEECTTCEEEECT-------
T ss_pred ----CcceEEEEcccCCCchheecccc-cCceEEeccccccccceeeccccccccc-ceeeccCCCeEEEecC-------
Confidence 37999999999999999999987 5899999999999998877766655444 8899999999988754
Q ss_pred cCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 461 ALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 461 ~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
.|||+++|+.+ .+|||+|| +|++|+|
T Consensus 215 ------~Gel~~~g~~~---------------~~g~~~TGDlg~~d~~ 241 (358)
T 4gs5_A 215 ------RGCLHISGAVT---------------NGQTVQTNDLVEIHGN 241 (358)
T ss_dssp ------TSEEEEESGGG---------------TTCCEEEEEEEEECSS
T ss_pred ------cCceEEecccc---------------cCcceecCCccccccC
Confidence 69999998632 47899999 9999986
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.97 E-value=1.5e-30 Score=264.02 Aligned_cols=244 Identities=16% Similarity=0.074 Sum_probs=184.9
Q ss_pred EeeHHHHHhccccCCCCCCCCCC-CCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecCh
Q 010568 199 VYSWDEFLQLGENKQFDLPVKKK-NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPL 277 (507)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~~~-~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 277 (507)
..+.+++.... +.......+ +++++++|||||||.||+|.++|.++......+...+ ...++..+|++++.+|+
T Consensus 65 ~~~~~~l~~~~---p~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~ 139 (436)
T 3qov_A 65 FTTKSDMRANY---PFGLVAGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCL--YMVGIRKTDVFQNSSGY 139 (436)
T ss_dssp CBCHHHHHHTT---TTTTCCSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHH--HHTTCCTTSEEEECSCC
T ss_pred CCCHHHHHhcC---CCccccCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHH--HHcCCCCCCEEEECccc
Confidence 34445555432 122233455 8899999999999999999999999987766643322 22367889999999998
Q ss_pred HHHHHH-HHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHH
Q 010568 278 AHIFDR-AIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKF 355 (507)
Q Consensus 278 ~h~~g~-~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (507)
.|..+. ...+.++..|+++++.+. ++..+++.|+++++|+++++|+++..|++..........
T Consensus 140 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--------------- 204 (436)
T 3qov_A 140 GMFTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPR--------------- 204 (436)
T ss_dssp TTCHHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTT---------------
T ss_pred ccchhHHHHHHHHHHcCCEEEeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcc---------------
Confidence 755554 457788999999998765 999999999999999999999999999876544321100
Q ss_pred hhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccceeccCCCCCc
Q 010568 356 HNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMS 435 (507)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~ 435 (507)
.+++|.+++||+++++++.+.+++.+|+++++.||+||+++.++......
T Consensus 205 ----------------------------~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~-- 254 (436)
T 3qov_A 205 ----------------------------ETTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFGMTEMNGPGVAFECQE-- 254 (436)
T ss_dssp ----------------------------SSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEEGGGTEEEEEEECTT--
T ss_pred ----------------------------cCCccEEEEeCCcCCHHHHHHHHHHhCccEEecCcchhhcCCeeEEecCC--
Confidence 13799999999999999999999999999999999999965422222211
Q ss_pred cCCcccccccCceEEEeecCCCccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 436 MIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 436 ~~~s~G~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
. ...|.|.++++++|+|.+++..+ +.|+.|||+|+|. +...|.++||+|| +|++|+|
T Consensus 255 ~-~g~~~~~~~~~v~i~d~~~g~~~--~~g~~Gel~v~~~------------~~~~~~~~~y~TGDl~~~~~~ 312 (436)
T 3qov_A 255 Q-NGMHFWEDCYLVEIIDPETGEPV--PEGEIGELVLTTL------------DREMMPLIRYRTRDLTRILPG 312 (436)
T ss_dssp C-SSEEECTTTEEEEEECTTTCSBC--STTCCEEEEEEES------------SCCSSCCCSEEEEEEECEECS
T ss_pred C-CeeEEccCceEEEEEECCCCCCC--CCCCceEEEEecc------------CcCCceEEEEEcCCEEEEcCC
Confidence 1 23677788999999993445444 4569999999984 2334568999999 9999975
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.97 E-value=8.1e-30 Score=258.66 Aligned_cols=242 Identities=16% Similarity=0.095 Sum_probs=184.7
Q ss_pred EeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecCh-
Q 010568 199 VYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPL- 277 (507)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl- 277 (507)
..+.+++.... +.......++++++++|||||||.||+|.++|.++......+...+ ...++..+|++++.+|+
T Consensus 70 ~~~~~~l~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~ 144 (437)
T 2y27_A 70 FTTKGDLRDSY---PFGMFAVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSI--RAAGARRGDKVHVSYGYG 144 (437)
T ss_dssp CBCHHHHHHTT---TTTTCSSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHH--HHTTCCTTCEEEECSCCS
T ss_pred CCCHHHHHhcC---CCccccCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHH--HHcCCCCCCEEEEccccc
Confidence 34556665433 1123344678999999999999999999999999887765543321 12467889999999998
Q ss_pred HHHHHHHHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHh
Q 010568 278 AHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFH 356 (507)
Q Consensus 278 ~h~~g~~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (507)
+|..++...+.++..|+++++.+. ++..+++.|+++++|+++++|+++..|++..........
T Consensus 145 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~---------------- 208 (437)
T 2y27_A 145 LFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPV---------------- 208 (437)
T ss_dssp SSHHHHHHHHHHHHTTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGG----------------
T ss_pred ccccchHHHHHHHHcCCEEEeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcc----------------
Confidence 688887778888999999988765 999999999999999999999999998775433211100
Q ss_pred hhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccc-eeccCCCCCc
Q 010568 357 NLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAG-TFVSLPNEMS 435 (507)
Q Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~-~~~~~~~~~~ 435 (507)
.+++|.+++||+++++++.+.+++.+|+++++.||+||+++. +........
T Consensus 209 ---------------------------~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~~- 260 (437)
T 2y27_A 209 ---------------------------QSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSEVMGPGVASECVETK- 260 (437)
T ss_dssp ---------------------------GSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEETTTTEEEEEECCTTTC-
T ss_pred ---------------------------cCCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCCchhhcCCeeEEecCCCC-
Confidence 037999999999999999999999889999999999998443 333222111
Q ss_pred cCCcccccccCceEEEeecCC-CccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEec
Q 010568 436 MIGTVGPPVPNVDVCLESVPE-MEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQ 506 (507)
Q Consensus 436 ~~~s~G~p~pg~~i~ivd~~~-~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~ 506 (507)
...+.|.+++.++|+| ++ +..+ +.|+.|||+|+|. +.+.|.++||+|| +|++|+
T Consensus 261 --~g~~~~~~~~~~~i~d-~~~g~~~--~~g~~Gel~v~~~------------t~~~~~~~~y~TGDl~~~~~ 316 (437)
T 2y27_A 261 --DGPTIWEDHFYPEIID-PETGEVL--PDGELGELVFTSL------------TKEALPIIRYRTRDLTRLLP 316 (437)
T ss_dssp --SSCEECTTTEEEEEEC-TTTCCBC--CTTCCEEEEEEES------------SCSSSCCCSEEEEEEECEEC
T ss_pred --CceeEccCceEEEEEc-CCCCCCC--CCCCccEEEEecC------------CcCCchhheeecCCEEEEeC
Confidence 1256677899999999 54 5444 4569999999983 2344568999999 999997
No 35
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.97 E-value=1.3e-29 Score=257.67 Aligned_cols=243 Identities=15% Similarity=0.096 Sum_probs=184.4
Q ss_pred EeeHHHHHhccccCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecCh-
Q 010568 199 VYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPL- 277 (507)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl- 277 (507)
..+.+++.... +.......++++++++|||||||.||+|.++|.++......+...+ ...++..+|++++.+|+
T Consensus 72 ~~~~~~l~~~~---p~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~ 146 (443)
T 2y4o_A 72 FSTKNDLRDNY---PFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSI--RAAGGRPGDTLHNAFGYG 146 (443)
T ss_dssp CBCHHHHHTTT---TTTTCSSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHH--HHTTCCTTCEEEECSCCS
T ss_pred CCcHHHHHhhC---CCcccCCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHH--HHcCCCCCCEEEEeccCc
Confidence 44566665433 1123344678899999999999999999999999887665543321 12467889999999998
Q ss_pred HHHHHHHHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhHHh
Q 010568 278 AHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFH 356 (507)
Q Consensus 278 ~h~~g~~~~~~~l~~G~~v~l~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (507)
.|..++...+.++..|+++++.+. +++.+++.|+++++|+++++|+++..|++.........
T Consensus 147 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~----------------- 209 (443)
T 2y4o_A 147 LFTGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDP----------------- 209 (443)
T ss_dssp SSHHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCG-----------------
T ss_pred ccccHHHHHHHHHHcCCEEEECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCc-----------------
Confidence 577777778888999999988765 99999999999999999999999999877543321100
Q ss_pred hhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHhhCCcEEeecccccCccc-eeccCCCCCc
Q 010568 357 NLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAG-TFVSLPNEMS 435 (507)
Q Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~~~~~~~v~~~YG~tE~~~~-~~~~~~~~~~ 435 (507)
..+++|.+++||+++++++.+.+++.+|+++++.||+||+++. +........
T Consensus 210 --------------------------~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~~- 262 (443)
T 2y4o_A 210 --------------------------AESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVETK- 262 (443)
T ss_dssp --------------------------GGSSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEEETTTTEEEEEEECTTTC-
T ss_pred --------------------------ccCCceEEEECCCcCCHHHHHHHHHHhCcCEEeccCchhhcCCeEEeccCCCC-
Confidence 0037999999999999999999999889999999999998543 332222111
Q ss_pred cCCcccccccCceEEEeecCC-CccccCCCCCCceEEEecCCccccccCChhhhhhhcccCceeec-cEEEecC
Q 010568 436 MIGTVGPPVPNVDVCLESVPE-MEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTG-MGVWEQL 507 (507)
Q Consensus 436 ~~~s~G~p~pg~~i~ivd~~~-~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dgw~~TG-lg~~d~d 507 (507)
...+.|.+++.++|+| ++ +..+ +.|+.|||+|+|. +.+.|.++||+|| +|++|+|
T Consensus 263 --~g~~~~~~~~~~~i~d-~~~g~~~--~~G~~Gel~v~~~------------t~~~~p~~~y~TGDl~~~~~~ 319 (443)
T 2y4o_A 263 --DGPVIWEDHFYPEIID-PVTGEVL--PDGSQGELVFTSL------------TKEAMPVIRYRTRDLTALLPP 319 (443)
T ss_dssp --CSEEECTTTEEEEEEC-TTTCCBC--CTTCCEEEEEEES------------SCSSSCCSSEEEEEEECEECC
T ss_pred --CceEEccCCeEEEEEc-CCCCCCC--CCCCceEEEEeCC------------CcccChhheeecCCEEEEcCC
Confidence 1245567899999999 54 5544 4569999999983 2334568999999 9999975
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.96 E-value=6.1e-29 Score=246.48 Aligned_cols=226 Identities=15% Similarity=0.103 Sum_probs=175.7
Q ss_pred CCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecCh-HHHHHHHHHHHHHHcCCEEE
Q 010568 219 KKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPL-AHIFDRAIEEVFISNGAAIG 297 (507)
Q Consensus 219 ~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl-~h~~g~~~~~~~l~~G~~v~ 297 (507)
..++++++|+|||||||.||+|.++|.++......+... ....++..+|++++.+|+ +|.+++...+.++..|+.++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSG--YQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTT--TTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhh--HHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEE
Confidence 467889999999999999999999999999888754322 233467889999999999 99999988888899999443
Q ss_pred EecCCHH-----------------------HHHHHhhhhCCeEEecCcHHHHHHHHHHHHhhhccchhHHHHHHHHHHhH
Q 010568 298 FWRGDVK-----------------------LLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYK 354 (507)
Q Consensus 298 l~~~~~~-----------------------~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (507)
..+.++. .+++.|+++++|+++++|+++..|++...
T Consensus 166 ~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~--------------------- 224 (369)
T 3hgu_A 166 SIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPE--------------------- 224 (369)
T ss_dssp CCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHH---------------------
T ss_pred CccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhh---------------------
Confidence 3333666 78889999999999999999999865311
Q ss_pred HhhhhcCCCCCCCchhhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHH-Hhh-CCcEEeecccccCccceeccCCC
Q 010568 355 FHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLR-VVA-CAHVLQGYGLTETCAGTFVSLPN 432 (507)
Q Consensus 355 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~l~~~~~-~~~-~~~v~~~YG~tE~~~~~~~~~~~ 432 (507)
....++ +++|.+++||+++++++.+.++ +.+ ++++++.||+||+++++..+..
T Consensus 225 ----------------~~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~- 279 (369)
T 3hgu_A 225 ----------------VVLQMK--------QSLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI- 279 (369)
T ss_dssp ----------------HHHHHH--------HHCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB-
T ss_pred ----------------hhcccc--------CCeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcceecccc-
Confidence 111112 2799999999999999999999 888 8999999999999876643321
Q ss_pred CCccCCccccc------ccCceEEEeecC-CCccccCCCCCCceEEEec---CCccccccCChhhhhhhcccCceeec
Q 010568 433 EMSMIGTVGPP------VPNVDVCLESVP-EMEYDALSSTPRGEVCVKG---STVFSGYYKREDLTKEVMVDGWFHTG 500 (507)
Q Consensus 433 ~~~~~~s~G~p------~pg~~i~ivd~~-~~~~~~~~~g~~Gel~v~g---~~v~~gY~~~~~~~~~~~~dgw~~TG 500 (507)
.++|+| +|+++++|+| + +++.++ .|+.|||+|++ ...+.+|...+..+.....+||+.+|
T Consensus 280 -----~~~G~~~~~~~~~~~~~v~ivD-~~~g~~vp--~G~~GEl~vt~l~~~~~l~ry~tgD~~~~~~~~~g~~~d~ 349 (369)
T 3hgu_A 280 -----TSESQQVIYDSFSPFITYDVVD-SITAQTVE--YGERGNVIVTHLSPWAFYPRVAERDTAIRLPGVSGFAGDR 349 (369)
T ss_dssp -----CTTCSSCEEECCTTTEEEEEEC-TTTCSBCC--TTCEEEEEEEEEETTEEEEEEEEEEEEEEECCSTTCSSCE
T ss_pred -----ccCCCcccccCCCCCeEEEEEC-CCCCcCCC--CCCceEEEEEEcCcccccccccCCceEEEecCCCCCcCcc
Confidence 148899 9999999999 6 565444 56999999997 33467888776665555578898887
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=95.64 E-value=0.19 Score=51.19 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=36.0
Q ss_pred CceEeeHHHHHhccccC-CCCC-CCCCCCCeEEEEeccCCC-CCCceeeeccHHHHHH
Q 010568 196 GLAVYSWDEFLQLGENK-QFDL-PVKKKNDICTIMYTSGTT-GDPKGVMVSNENIVTF 250 (507)
Q Consensus 196 ~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~a~i~~TSGtT-G~pK~v~~sh~~l~~~ 250 (507)
.+.+.+++++....... .-+. ....++.+.+..-||||| |.+|-+++|...+-..
T Consensus 65 ~VPi~~Yedl~pyIeRi~~Ge~~~iL~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~~ 122 (581)
T 4eql_A 65 NVPIVSYEDIKPYLDRVVNGESSDVISARTITGFLLSSGTSGGAQKMMPWNNKYLDNL 122 (581)
T ss_dssp HSCCBCHHHHHHHHHHHHTTCCGGGTCSSCCCEEEEEEEEETTEEEEEEECHHHHHHH
T ss_pred hCCCccHHHHHHHHHHHHcCCCCcccCCCCCCeEEeCCCCCCCCccccccCHHHHHHH
Confidence 44567777765433111 1111 223566777899999999 6799999999877553
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=95.58 E-value=0.28 Score=50.24 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=35.7
Q ss_pred CceEeeHHHHHhccccC-CCCC-CCCCCCCeEEEEeccCCC-CCCceeeeccHHHHH
Q 010568 196 GLAVYSWDEFLQLGENK-QFDL-PVKKKNDICTIMYTSGTT-GDPKGVMVSNENIVT 249 (507)
Q Consensus 196 ~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~a~i~~TSGtT-G~pK~v~~sh~~l~~ 249 (507)
.+.+.+++++....... .-+. ....++.+.++.-||||| |+||.+.+|...+-.
T Consensus 71 ~VPv~~Yedl~p~ieRi~~Ge~~~il~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 71 KIPVIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp HSCCBCHHHHHHHHHHHHTTCCSSSSCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred hCCCccHHHHHHHHHHHhcCCCCCccCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 34567777765432110 0111 233567778899999999 789999999887755
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=93.19 E-value=1.1 Score=45.56 Aligned_cols=55 Identities=20% Similarity=0.190 Sum_probs=36.6
Q ss_pred cCceEeeHHHHHhccccC-CCC-CCCCCCCCeEEEEeccCCC-CCCceeeeccHHHHH
Q 010568 195 YGLAVYSWDEFLQLGENK-QFD-LPVKKKNDICTIMYTSGTT-GDPKGVMVSNENIVT 249 (507)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~-~~~-~~~~~~~~~a~i~~TSGtT-G~pK~v~~sh~~l~~ 249 (507)
..+.+.+++++....... .-+ .....++.+.+..-||||| |++|-+.+|...+-.
T Consensus 69 ~~VPi~~Yedl~pyIeRi~~Ge~~~iL~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 69 SMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp HHSCCBCHHHHHHHHHHHHTTCCSSSSSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred HhCCCccHHHHHHHHHHHHCCCCCCccCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 345677787765432110 111 2234566778899999999 779999999887755
No 40
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=92.75 E-value=0.85 Score=44.98 Aligned_cols=125 Identities=14% Similarity=0.049 Sum_probs=88.5
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCc--hhhHHHHHHHHhcCCEEee
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNC--PEWIIGMEACNALGLHCVP 132 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 132 (507)
.++.++.+... .|.++.. ..+|.+.+...+..+++.+...|+.++|++...++.. ...+...++++..|+.+++
T Consensus 88 ~~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 88 PQDRISRIHAS--SGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp CGGGCCEEEEC--CCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred ChhHeEEEEEC--CCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 34666655541 4444433 3689999998888888888889999999999988853 4445567888999999887
Q ss_pred ccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCC----C-CCCCccEEEEecCC
Q 010568 133 LYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP----K-TTEHLKTIVSFSKV 184 (507)
Q Consensus 133 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~----~-~~~~~~~v~~~~~~ 184 (507)
++. .+.+.+...++..++.+++.....+..+.+... . ....++.++.-...
T Consensus 166 ~~~-~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 221 (437)
T 2y27_A 166 FGG-GQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEP 221 (437)
T ss_dssp CCS-CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSC
T ss_pred CCC-CCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCcc
Confidence 765 478889999999999999988766555443211 1 12466666665544
No 41
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=92.28 E-value=1.1 Score=44.31 Aligned_cols=125 Identities=14% Similarity=0.029 Sum_probs=88.8
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCc--hhhHHHHHHHHhcCCEEee
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNC--PEWIIGMEACNALGLHCVP 132 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 132 (507)
.++.++.+... .|.++.. ..+|.+.+...+..+++.+...|+.++|++...++-+ ...+...++++..|+.+++
T Consensus 90 ~~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 90 PREQVVRVHAS--SGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp CGGGCCEEEEE--CCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred ChhheEEEEEC--CCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 34566655441 4555543 3579999988888888888889999999999988853 4445567888999999887
Q ss_pred ccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCC----C-CCCCccEEEEecCC
Q 010568 133 LYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP----K-TTEHLKTIVSFSKV 184 (507)
Q Consensus 133 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~----~-~~~~~~~v~~~~~~ 184 (507)
+++. +.+.+...++..++.+++.....+..+.+... . ....++.++.-+..
T Consensus 168 ~~~~-~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 223 (443)
T 2y4o_A 168 MSGG-QTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEP 223 (443)
T ss_dssp CCSC-CHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSC
T ss_pred CCCC-CHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCc
Confidence 7664 78888899999999999988766554443211 1 12566666665543
No 42
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=90.54 E-value=1.1 Score=44.07 Aligned_cols=123 Identities=11% Similarity=0.031 Sum_probs=88.2
Q ss_pred CCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCc--hhhHHHHHHHHhcCCEEeecc
Q 010568 59 NNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNC--PEWIIGMEACNALGLHCVPLY 134 (507)
Q Consensus 59 d~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 134 (507)
+.++++... .|.++.. ..+|.+.+...+..+++.+...|+.++|++....+-+ ...+..+++++..|+.+++.+
T Consensus 86 ~~~a~i~~T--SGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 163 (436)
T 3qov_A 86 RDGVRIHSS--SGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAA 163 (436)
T ss_dssp HHEEEEEEC--SCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCC
T ss_pred CCeEEEEEC--CCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCC
Confidence 455655441 4444433 3689999999888888888889999999999988753 344556788899999988776
Q ss_pred CCCChHHHHHHHhhcCccEEEecCCChhHHhhcC-----CCCCCCccEEEEecCC
Q 010568 135 DTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTF-----PKTTEHLKTIVSFSKV 184 (507)
Q Consensus 135 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~ 184 (507)
+. +.+.+...++..++.+++........+.+.. ......++.++.-+..
T Consensus 164 ~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 217 (436)
T 3qov_A 164 AG-NSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEP 217 (436)
T ss_dssp SC-CHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSC
T ss_pred CC-CHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCc
Confidence 54 6788889999999999998876665544331 1113567777766544
No 43
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.91 E-value=6.7 Score=39.20 Aligned_cols=122 Identities=11% Similarity=0.012 Sum_probs=85.8
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchh-hHHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPE-WIIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l 133 (507)
.++.+|++... .|.++.. ..+|.+.+...+..+.. ..++.++|++...+|-.-. .+..+++++..|+.++..
T Consensus 161 ~~~d~a~i~~T--SGTTG~PKgv~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 235 (501)
T 3ipl_A 161 NLDDIASIMFT--SGTTGPQKAVPQTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIV 235 (501)
T ss_dssp CTTSEEEEEEC--CTTTSCCCEEEEEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCcEEEEeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeC
Confidence 46777777652 3444433 36798888776665543 4588999999988876533 344567888899988876
Q ss_pred cCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCC
Q 010568 134 YDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184 (507)
Q Consensus 134 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 184 (507)
+ ..+.+.+...+++.++.+++........+.+........++.++.-+..
T Consensus 236 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~lr~i~~gG~~ 285 (501)
T 3ipl_A 236 D-KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYNLQKILLGGAK 285 (501)
T ss_dssp S-SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSCTTCCEEEECSSC
T ss_pred C-CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCcCcccEEEEeCCC
Confidence 5 4788999999999999999998877766665544333466666665543
No 44
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=85.13 E-value=3.1 Score=39.74 Aligned_cols=104 Identities=11% Similarity=0.004 Sum_probs=69.9
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCC--chhhHHHHHHHHhcCCEEee
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVN--CPEWIIGMEACNALGLHCVP 132 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 132 (507)
.++.++.+... .|.++.. ..+|.+.+...+..+++.+...|+.++|++..++|- +.-.+...+++...|+.+++
T Consensus 89 ~~~~~a~i~~T--SGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~ 166 (369)
T 3hgu_A 89 PADSHPQVYES--GGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFS 166 (369)
T ss_dssp CTTCCCEEEEE--CC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEEC
T ss_pred CccccEEEEEC--CCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEEC
Confidence 45666666542 4555543 357888888888777777777899999999999886 33334555666888985554
Q ss_pred ccCCCChH-----------------------HHHHHHhhcCccEEEecCCChhHH
Q 010568 133 LYDTLGAG-----------------------AVEFIICHSGVSIAFVEEKKIPEM 164 (507)
Q Consensus 133 l~~~~~~~-----------------------~l~~~l~~~~~~~vi~~~~~~~~~ 164 (507)
. ..++. .+...+++.++.+++.....+..+
T Consensus 167 ~--~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l 219 (369)
T 3hgu_A 167 I--DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLREL 219 (369)
T ss_dssp C--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHH
T ss_pred c--cCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 3 33444 666688999999998876554443
No 45
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=79.75 E-value=31 Score=34.65 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=83.2
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHH---HHHHHHhcCCEEe
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWII---GMEACNALGLHCV 131 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v 131 (507)
.|+.+|++... .|.++.. ..+|.+.+...+..... ..++.++|++...+|-+-.+-. .+++++..|+.++
T Consensus 180 ~~~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 254 (539)
T 1mdb_A 180 KSSDVAFLQLS--GGSTGLSKLIPRTHDDYIYSLKRSVE---VCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVV 254 (539)
T ss_dssp CTTSEEEEEEC--CCSSSSCCEEEEEHHHHHHHHHHHHH---HHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred CcCceEEEEeC--CCcCCCCcEEEEehHHHHHHHHHHHH---hhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEE
Confidence 46777877652 3444432 36899988777655544 3478899999888886644322 4788889999887
Q ss_pred eccCCCChHHHHHHHhhcCccEEEecCCChhHHhhc---CCCCCCCccEEEEecCC
Q 010568 132 PLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKT---FPKTTEHLKTIVSFSKV 184 (507)
Q Consensus 132 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~ 184 (507)
..+ ..+.+.+...+++.++.+++........+.+. .....+.++.++.-+..
T Consensus 255 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~ 309 (539)
T 1mdb_A 255 LSP-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAK 309 (539)
T ss_dssp ECS-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSC
T ss_pred ECC-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCC
Confidence 654 46788899999999999999887655544332 12233667777665544
No 46
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=78.17 E-value=16 Score=36.52 Aligned_cols=123 Identities=10% Similarity=-0.010 Sum_probs=81.0
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchh-hHHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPE-WIIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l 133 (507)
.++.+|++... .|.++.. ..+|++.+...+..... ..++.++|++...+|-+.. .+..+++++..|+.++.+
T Consensus 142 ~~~d~a~i~~T--SGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 216 (512)
T 3fce_A 142 KGDENFYIIYT--SGSTGNPKGVQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAI 216 (512)
T ss_dssp CTTSEEEEEEE--CC----CEEEEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCceEEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEEC
Confidence 35666766552 4444433 36788888776655443 4588999999998887643 345678889999998877
Q ss_pred cCC--CChHHHHHHHhhcCccEEEecCCChhHHhhcCC---CCCCCccEEEEecCC
Q 010568 134 YDT--LGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP---KTTEHLKTIVSFSKV 184 (507)
Q Consensus 134 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 184 (507)
++. .+++.+...+++.++.+++........+..... ...+.++.++.-+..
T Consensus 217 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~ 272 (512)
T 3fce_A 217 DKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEV 272 (512)
T ss_dssp CHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSC
T ss_pred CHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCc
Confidence 653 467888899999999999987765554433221 223566666665543
No 47
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=77.57 E-value=10 Score=35.93 Aligned_cols=119 Identities=8% Similarity=-0.051 Sum_probs=76.4
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchh-hHHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPE-WIIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l 133 (507)
+.|.+|++... .|.++.. ..+|++.+...+..++. ..+++++|++...+|-+-. .+..++..+..|+..+..
T Consensus 35 ~~d~~a~Il~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~ 109 (358)
T 4gs5_A 35 LGGAREFVLHT--SGSTGMPKPITVTRAQLAASAAMTGK---ALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVT 109 (358)
T ss_dssp HHTCSEEEEEE--ECTTSSEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCEEEEEC--CcccccCcEEEEeHHHHHHHHHHHHH---HhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEec
Confidence 45778877652 4555544 36899988876655544 3588999999988876533 344556677778877766
Q ss_pred cCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCC--CCCCccEEEEecC
Q 010568 134 YDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPK--TTEHLKTIVSFSK 183 (507)
Q Consensus 134 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~v~~~~~ 183 (507)
.+.... ...++..++.+++.....+..+.+.... ..+.++.++.-..
T Consensus 110 ~~~~~~---~~~i~~~~~t~~~~~P~~l~~ll~~~~~~~~l~~lr~v~~gG~ 158 (358)
T 4gs5_A 110 EPTANP---LAGLDHADFDFVAMVPMQLQSILENSATSGQVDRLGKVLLGGA 158 (358)
T ss_dssp CCCSCT---TTTCSSCCCSEEEECHHHHHHHHHCTTTGGGGGGGCSEEECSS
T ss_pred CccccH---HHHHHHhCCeEEEcChHHHHHhhccccccccCCcceEEEEccc
Confidence 654332 3457788999988877655555443322 2245556655443
No 48
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=77.35 E-value=15 Score=36.84 Aligned_cols=120 Identities=12% Similarity=0.020 Sum_probs=77.4
Q ss_pred CCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHH--HHHHHhcCCEEeec
Q 010568 58 PNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIG--MEACNALGLHCVPL 133 (507)
Q Consensus 58 pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~--~lA~~~~G~~~v~l 133 (507)
++.+|++... .|.++.. ..+|.+.+...+..++.. .++.++|++...+|-.-.+-.. +++++ .|+.++..
T Consensus 169 ~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~ 242 (517)
T 3r44_A 169 GDDNLFIMYT--SGTTGHPKGVVHTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISM 242 (517)
T ss_dssp TTSEEEEEEE--CC---CCEEEEEEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEEC
T ss_pred CCCeEEEEEC--CcccccCceeeeeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEe
Confidence 4666766552 4444443 368998887776665544 4889999999888876444332 44444 88888766
Q ss_pred cCCCChHHHHHHHhhcCccEEEecCCChhHHhhcC---CCCCCCccEEEEecCC
Q 010568 134 YDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTF---PKTTEHLKTIVSFSKV 184 (507)
Q Consensus 134 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 184 (507)
+ ..+.+.+...++..++.+++........+.+.. ....+.++.++.-+..
T Consensus 243 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~ 295 (517)
T 3r44_A 243 P-QFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAP 295 (517)
T ss_dssp S-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSC
T ss_pred C-CCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCC
Confidence 4 578889999999999999998876555443321 1122556666655543
No 49
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=77.29 E-value=13 Score=38.29 Aligned_cols=123 Identities=11% Similarity=0.083 Sum_probs=85.4
Q ss_pred CCCCCceeeEeeccCcCCceE--EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh-HHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKYV--WKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW-IIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l 133 (507)
.|+.+|++... .|.++..+ .+|.+.+...+. .....++.++|++...++-+-+. +..+++.+..|+.++..
T Consensus 162 ~~~d~a~iiyT--SGSTG~PKgV~~th~~l~~~~~----~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~ 235 (620)
T 4dg8_A 162 AADQIAYINFS--SGTTGRPKAIACTHAGITRLCL----GQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLN 235 (620)
T ss_dssp CTTSEEEEEEE--BSSSSSCEEEEEEHHHHHHHHS----SCGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEEC--CCccccCeEEEEchHHHHHHHH----HHHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeC
Confidence 46778877652 45555433 578877754332 22335789999999988876443 44578888999987766
Q ss_pred c-CCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCC
Q 010568 134 Y-DTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVK 185 (507)
Q Consensus 134 ~-~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 185 (507)
+ ...+++.+...++..++.+++........+.+......+.++.++.-+...
T Consensus 236 ~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~l~~lr~v~~gGe~l 288 (620)
T 4dg8_A 236 DLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGLRQLLTGGDIL 288 (620)
T ss_dssp CSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCGGGGTTCSEEEEESSCC
T ss_pred ccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcChhhCCCccEEEEEeCcC
Confidence 3 356888999999999999999887766665554444446777777766543
No 50
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=77.04 E-value=12 Score=37.82 Aligned_cols=122 Identities=11% Similarity=-0.051 Sum_probs=81.2
Q ss_pred CCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhH--HHHHHHHhcCCEEeecc
Q 010568 59 NNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWI--IGMEACNALGLHCVPLY 134 (507)
Q Consensus 59 d~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~ 134 (507)
+.+|++... .|.++.. ..+|.+.+...+......+...++.++|++...+|-+-.+- ..+++++ .|+.++.++
T Consensus 192 ~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~ 268 (548)
T 2d1s_A 192 EQVALIMNS--SGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT 268 (548)
T ss_dssp TCEEEEECC--SSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC
T ss_pred CCEEEEEeC--CCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC
Confidence 667766551 3444432 36899988877665554433367889999988887664432 3356667 999888765
Q ss_pred CCCChHHHHHHHhhcCccEEEecCCChhHHhhcCC---CCCCCccEEEEecCC
Q 010568 135 DTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP---KTTEHLKTIVSFSKV 184 (507)
Q Consensus 135 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 184 (507)
..+.+.+...+++.++.+++........+.+... ...+.++.++.-+..
T Consensus 269 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~ 320 (548)
T 2d1s_A 269 -KFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAP 320 (548)
T ss_dssp -CCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSC
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCcc
Confidence 5688899999999999999988776665544321 122566666655443
No 51
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=75.67 E-value=29 Score=34.55 Aligned_cols=120 Identities=8% Similarity=-0.059 Sum_probs=76.6
Q ss_pred CCCCCceeeEeeccCcCCceE--EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh-HHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKYV--WKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW-IIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l 133 (507)
.++.+|++... .|.++..+ .+|.+.+...+..+.. ..++.++|++...+|-.-.+ +...+.+...|...+.+
T Consensus 158 ~~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~ 232 (509)
T 3ivr_A 158 GAADGFVIIHT--AAVGGRPRGALISQGNLLIAQSSLVD---AWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIA 232 (509)
T ss_dssp CTTSEEEEEEE--EC--CCEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC
T ss_pred CccccEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHH---hhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEe
Confidence 46677776552 45555443 6888888776665544 45889999999988876443 33334434444444444
Q ss_pred cCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCC-CCCCCccEEEEec
Q 010568 134 YDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP-KTTEHLKTIVSFS 182 (507)
Q Consensus 134 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~v~~~~ 182 (507)
. ..+.+.+...++..++.+++........+.+... .....++.++...
T Consensus 233 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~~~~~g 281 (509)
T 3ivr_A 233 A-KFDPAQAARDIEAHKVTVMAEFAPMLGNILDQAAPAQLASLRAVTGLD 281 (509)
T ss_dssp S-SCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHCCGGGGTTCCEEEEEC
T ss_pred c-ccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcccccchhhhheecccC
Confidence 4 6788999999999999999988877766655432 2224555555443
No 52
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=75.64 E-value=27 Score=34.83 Aligned_cols=123 Identities=10% Similarity=-0.021 Sum_probs=82.8
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh-HHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW-IIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l 133 (507)
.++.+|++... .|.++.. ..+|.+.+...+..++. ..++.++|++...+|-+... +..+++++..|+.++.+
T Consensus 141 ~~~~~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 215 (511)
T 3e7w_A 141 KEHETFYIIYT--SGSTGNPKGVQISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCV 215 (511)
T ss_dssp CTTSEEEEEEE--CCTTSSCEEEEEEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEc
Confidence 35667776552 4555543 36888888776655443 46888999999988876433 44578889999988876
Q ss_pred cCC--CChHHHHHHHhhcCccEEEecCCChhHHhhcC---CCCCCCccEEEEecCC
Q 010568 134 YDT--LGAGAVEFIICHSGVSIAFVEEKKIPEMLKTF---PKTTEHLKTIVSFSKV 184 (507)
Q Consensus 134 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 184 (507)
+.. .+++.+...++..++.+++........+.... ....+.++.++.-+..
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~ 271 (511)
T 3e7w_A 216 TKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEV 271 (511)
T ss_dssp CHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSC
T ss_pred ChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCC
Confidence 543 46778889999999999998876665544332 1223556666655543
No 53
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=74.68 E-value=10 Score=38.66 Aligned_cols=123 Identities=10% Similarity=0.093 Sum_probs=85.3
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCch-hhHHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCP-EWIIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l 133 (507)
.|+.+|++... .|.++.. ..+|.+.+...... ....++.++|++...+|-+. -+...+++++..|+.++..
T Consensus 212 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~----~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~ 285 (570)
T 4gr5_A 212 GPEDVACVMFT--SGSTGRPKGVMSPHRALTGTYLG----QDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQ 285 (570)
T ss_dssp CTTSEEEEECC--SSCCSSCCCEEEEHHHHHHHHSS----CCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEEC--CcCCCCCeEEEEecHHHHHHHHh----hhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEc
Confidence 46777777652 3444432 36888877543221 22357889999999888753 3455678888999988877
Q ss_pred cC-CCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCC
Q 010568 134 YD-TLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVK 185 (507)
Q Consensus 134 ~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 185 (507)
.. ......+...+++.++.+++........+.+........++.++.-....
T Consensus 286 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~lr~~~~gG~~l 338 (570)
T 4gr5_A 286 SGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPEAFEGVRYAITGGEPA 338 (570)
T ss_dssp SSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGGGGTTCSEEEEESSCC
T ss_pred CCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchhhCCCceEEEEecccC
Confidence 54 56788899999999999999988777666655554557777777766543
No 54
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=73.35 E-value=23 Score=35.65 Aligned_cols=122 Identities=14% Similarity=0.035 Sum_probs=81.2
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHH---HHHHHHhcCCEEe
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWII---GMEACNALGLHCV 131 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v 131 (507)
.++.+|++... .|.++.. ..+|.+.+...+...+.. .++.++|++...+|....+-. .+++++..|+.++
T Consensus 189 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 263 (544)
T 3o83_A 189 PADEVAFFQLS--GGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVV 263 (544)
T ss_dssp CTTSEEEEEEC--CC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred CccceEEEEEC--CCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEE
Confidence 35677777652 3444432 368999888776665543 588999999998886654433 3678888998887
Q ss_pred eccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCC---CCCCCccEEEEecCC
Q 010568 132 PLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP---KTTEHLKTIVSFSKV 184 (507)
Q Consensus 132 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 184 (507)
..+ ......+...++..++.+++........+.+... ...+.++.++.-+..
T Consensus 264 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~ 318 (544)
T 3o83_A 264 MAP-NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGAS 318 (544)
T ss_dssp ECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSC
T ss_pred ECC-CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCC
Confidence 655 4578888899999999999988765554443322 112456666665543
No 55
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=70.17 E-value=42 Score=33.73 Aligned_cols=107 Identities=6% Similarity=-0.118 Sum_probs=77.7
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.++++....+..+ -..-.+|+..|...+..+...+. ..++.++|++...++-+. -....+++++..|+..+..
T Consensus 32 ~p~~~A~~~~~~~~~~-~~~~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl 107 (549)
T 3g7s_A 32 FGEKTAIISAEPKFPS-EFPESMNFLEICEVTKKLASGIS--RKGVRKGEHVGVCIPNSI-DYVMTIYALWRVAATPVPI 107 (549)
T ss_dssp HTTSEEEEEESSCCCC-SSCSEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEeCCCcccc-cccceeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEEcc
Confidence 3567777654322111 11246899999888888777553 347889999999988773 2344577889999998887
Q ss_pred cC--CHHHHHHHhhhhCCeEEecCcHHHHHHHH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCAVPRVLDRIYS 330 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~ 330 (507)
+. ..+.+...++..++.+++..+.....+..
T Consensus 108 ~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~ 140 (549)
T 3g7s_A 108 NPMYKSFELEHILNDSEATTLVVHSMLYENFKP 140 (549)
T ss_dssp CTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHH
Confidence 65 88999999999999999998887666543
No 56
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=68.98 E-value=35 Score=34.65 Aligned_cols=123 Identities=9% Similarity=-0.070 Sum_probs=83.3
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHH--HHHHHHhcCCEEee
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWII--GMEACNALGLHCVP 132 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~--~~lA~~~~G~~~v~ 132 (507)
.++.+|++... .|.++.. ..+|.+.+...+..+.. ..++.++|++...+|-+-.+-. .+++++..|+.++.
T Consensus 165 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~ 239 (590)
T 3kxw_A 165 KSNDIAFLQYT--SGSTMHPKGVMVSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIM 239 (590)
T ss_dssp CTTSEEEEEEC--SSCSSSCCEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEE
T ss_pred CCCCeEEEEeC--cCCCCCceEEEeeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEE
Confidence 46778877662 3444433 36899988877766554 4588999999999887755433 37888899999887
Q ss_pred ccCCC---ChHHHHHHHhhcCccEEEecCCChhHHhhcC------CCCCCCccEEEEecCC
Q 010568 133 LYDTL---GAGAVEFIICHSGVSIAFVEEKKIPEMLKTF------PKTTEHLKTIVSFSKV 184 (507)
Q Consensus 133 l~~~~---~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~ 184 (507)
..+.. ++..+...+++.++.++.........+.+.. ....+.++.++.-...
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~ 300 (590)
T 3kxw_A 240 MSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEP 300 (590)
T ss_dssp CCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSC
T ss_pred eCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCC
Confidence 76532 5677888899999999887765544443322 1122566666665544
No 57
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=68.40 E-value=36 Score=34.10 Aligned_cols=101 Identities=13% Similarity=0.060 Sum_probs=76.3
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.++++.. .+| -.+|+..+...+..+...+. ..++.++|++...++-+. -....+++++..|+..+..
T Consensus 35 ~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 35 HSSKPCLING---ANG----DVYTYADVELTARRVASGLN--KIGIQQGDVIMLFLPSSP-EFVLAFLGASHRGAIITAA 104 (536)
T ss_dssp STTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSH-HHHHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCEEecc
Confidence 4677776542 222 46899999888888777553 347889999999988873 2344577889999998877
Q ss_pred cC--CHHHHHHHhhhhCCeEEecCcHHHHHHHH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCAVPRVLDRIYS 330 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~ 330 (507)
+. .++.+...++..++.+++..+.....+..
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 137 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEKVKD 137 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHH
Confidence 65 88999999999999999998877666544
No 58
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=67.90 E-value=17 Score=36.71 Aligned_cols=123 Identities=11% Similarity=-0.060 Sum_probs=79.9
Q ss_pred CCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchh-hHHHHHHHHhcCCEEeeccC
Q 010568 59 NNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPE-WIIGMEACNALGLHCVPLYD 135 (507)
Q Consensus 59 d~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 135 (507)
+.+|++... .|.++.. ..+|.+.+...+......+...++.++|++...+|-+-. .+...++++..|+.++.+.
T Consensus 190 ~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 266 (550)
T 3rix_A 190 KTIALIMNS--SGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY- 266 (550)
T ss_dssp TSEEEEEEC-------CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCEEEEEEC--CCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC-
Confidence 556666551 3444332 368888887766555444434578899999888886633 3455677888999888764
Q ss_pred CCChHHHHHHHhhcCccEEEecCCChhHHhhcCC---CCCCCccEEEEecCC
Q 010568 136 TLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP---KTTEHLKTIVSFSKV 184 (507)
Q Consensus 136 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 184 (507)
..+.+.+...+++.++.+++........+.+... ...+.++.++.-+..
T Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~ 318 (550)
T 3rix_A 267 RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAP 318 (550)
T ss_dssp SCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSC
T ss_pred CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCC
Confidence 5688889999999999999988766655544321 122566666665543
No 59
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=67.02 E-value=53 Score=32.94 Aligned_cols=100 Identities=7% Similarity=-0.113 Sum_probs=74.5
Q ss_pred CCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEec
Q 010568 221 KNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWR 300 (507)
Q Consensus 221 ~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~ 300 (507)
++.++++.... -..-.+|+..|...+..+...+. ..++.++|++...++-+. -....+++++..|+..+..+
T Consensus 32 p~~~a~~~~~~-----~~~~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 32 GRKEVVSRLHT-----GEVHRTTYAEVYQRARRLMGGLR--ALGVGVGDRVATLGFNHF-RHLEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp TTCEEEEECTT-----SCEEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEEecC-----CCCceecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEEecC
Confidence 45666654321 12457899999888888776553 347889999999988773 23345778899999988876
Q ss_pred C--CHHHHHHHhhhhCCeEEecCcHHHHHH
Q 010568 301 G--DVKLLLEDIGELKPTIFCAVPRVLDRI 328 (507)
Q Consensus 301 ~--~~~~~~~~i~~~~vt~l~~~P~~l~~l 328 (507)
. .++.+...++..++.++++.+.....+
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 5 788999999999999999988766544
No 60
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=66.24 E-value=1e+02 Score=31.34 Aligned_cols=122 Identities=15% Similarity=0.078 Sum_probs=82.2
Q ss_pred CCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHH---HHHHHHhcCCEEee
Q 010568 58 PNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWII---GMEACNALGLHCVP 132 (507)
Q Consensus 58 pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v~ 132 (507)
++.+|++... .|.++.. ..+|.+.+...+...... .++.++|++...+|-+..+-. .+++++..|+.++.
T Consensus 183 ~~~~a~ii~T--SGSTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~ 257 (617)
T 3rg2_A 183 ADEVAYFQLS--GGTTGTPKLIPRTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVL 257 (617)
T ss_dssp TTSEEEEEEC--CCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEE
T ss_pred CCCeEEEEEC--CCcCCCCCEeehhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEE
Confidence 5677776652 3444433 368998887776655544 478899999998886544332 36888888988876
Q ss_pred ccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcC-----CCCCCCccEEEEecCCC
Q 010568 133 LYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTF-----PKTTEHLKTIVSFSKVK 185 (507)
Q Consensus 133 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~ 185 (507)
.+. .+...+...++..++.++.........+.+.. ....+.++.+++-+...
T Consensus 258 ~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l 314 (617)
T 3rg2_A 258 AAD-PSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARL 314 (617)
T ss_dssp CSS-CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCC
T ss_pred eCC-CCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcC
Confidence 654 57788888999999999998876555443321 11336677777666543
No 61
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=64.06 E-value=31 Score=32.28 Aligned_cols=65 Identities=5% Similarity=-0.089 Sum_probs=47.8
Q ss_pred HHHCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 95 IRTCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 95 L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
..+.| +++|+.|.+....+-.-..+.++|...|.-++.+-|...+......++..++++++++..
T Consensus 62 a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 62 AEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34555 488988655555666777778888888987776666555556667789999999999754
No 62
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=64.00 E-value=35 Score=35.31 Aligned_cols=124 Identities=9% Similarity=-0.053 Sum_probs=81.6
Q ss_pred CCCCceeeEeeccCcCCceE--EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhH--HHHHHHHhcCCEEeec
Q 010568 58 PNNRMLGQREIVDGKAGKYV--WKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWI--IGMEACNALGLHCVPL 133 (507)
Q Consensus 58 pd~~a~~~~~~~~~~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l 133 (507)
++.++++... .|.++..+ .+|.+.+...+..... ...+++++|++....+-+...- ..+++.+..|+..+..
T Consensus 255 ~~d~a~ilyT--SGTTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~ 330 (652)
T 1pg4_A 255 AEDPLFILYT--SGSTGKPKGVLHTTGGYLVYAATTFK--YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMF 330 (652)
T ss_dssp TTSEEEEEEE--CCSSSSCEEEEEESHHHHHHHHHHHH--HHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEE
T ss_pred CCCCEEEEec--cCCCCCCceEEECchHHHHHHHHHHH--HhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEE
Confidence 5667766552 45555443 5777776544322211 2368899999988877665443 3467889999998877
Q ss_pred cCC---CChHHHHHHHhhcCccEEEecCCChhHHhhcCC-----CCCCCccEEEEecCCC
Q 010568 134 YDT---LGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFP-----KTTEHLKTIVSFSKVK 185 (507)
Q Consensus 134 ~~~---~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~ 185 (507)
+.. .+++.+..++++.++.++++.......+.+... ...+.++.++.-+...
T Consensus 331 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l 390 (652)
T 1pg4_A 331 EGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPI 390 (652)
T ss_dssp CSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCC
Confidence 642 467889999999999999988766655544321 1235677777766543
No 63
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=63.23 E-value=54 Score=33.94 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=74.1
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.+|++... ..+| ....+|...|...+..+...+. ...++.++|++...+|..- -....+++++..|+..+..
T Consensus 95 ~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~-~~~Gv~~Gd~V~i~~~~~~-e~v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLT-YSMGVRKGDTVAVYMPMVP-EAIITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHH-HTSCCCTTCEEEECCCSSH-HHHHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEee
Confidence 46777777542 2222 2356899999888888776552 1357889999999999873 2344578889999998877
Q ss_pred cC--CHHHHHHHhhhhCCeEEecCcHH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCAVPRV 324 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~~P~~ 324 (507)
.. .++.+...++..++.++++....
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 196 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDES 196 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESBC
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEcccc
Confidence 54 88999999999999999986653
No 64
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=62.74 E-value=49 Score=32.87 Aligned_cols=103 Identities=9% Similarity=-0.024 Sum_probs=71.5
Q ss_pred CCCCCceeeEeeccCcCCce--EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh--HHHHHHHHhcCCEEee
Q 010568 57 NPNNRMLGQREIVDGKAGKY--VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW--IIGMEACNALGLHCVP 132 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~ 132 (507)
.++.+|++... .|.++.. ..+|.+.+...+..+...+ ++.++|++...+|..-.. +..+++.+..|+.++.
T Consensus 153 ~~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~ 227 (505)
T 3nyq_A 153 DDGDPALVVYT--SGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRH 227 (505)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEE
T ss_pred CCCCeEEEEeC--CCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEE
Confidence 46677777652 4555543 3689999888777666554 788999988877764332 3347888899998876
Q ss_pred ccCCCChHHHHHHHhhcCccEEEecCCChhHHhh
Q 010568 133 LYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLK 166 (507)
Q Consensus 133 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 166 (507)
.. ..+.+.+...+ ..++.+++........+.+
T Consensus 228 ~~-~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~ 259 (505)
T 3nyq_A 228 LG-RFSTEGAAREL-NDGATMLFGVPTMYHRIAE 259 (505)
T ss_dssp CS-SCCHHHHHHHH-TTTCCEEEECHHHHHHHHH
T ss_pred CC-CCChHHHHHHH-hhCCeEEEehHHHHHHHHH
Confidence 64 56777777777 6789988887665554443
No 65
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=62.56 E-value=73 Score=31.07 Aligned_cols=107 Identities=9% Similarity=-0.058 Sum_probs=76.3
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.+|++.........-....+|...|...+..+...+.. .+. ++|++...++-.. -....+++++..|+..+..
T Consensus 37 ~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~--~g~-~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSR--CGS-TGDRVVISAPQGL-EYVVAFLGALQAGRIAVPL 112 (480)
T ss_dssp STTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTT--SSC-TTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHh--cCC-CCCEEEEEcCCcH-HHHHHHHHHHHhCcEEEee
Confidence 46778877654321111234678999999998888776633 244 7899998888773 2344577889999998876
Q ss_pred cC-----CHHHHHHHhhhhCCeEEecCcHHHHHHHH
Q 010568 300 RG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYS 330 (507)
Q Consensus 300 ~~-----~~~~~~~~i~~~~vt~l~~~P~~l~~l~~ 330 (507)
+. ..+.+...++..++.+++..+.....+..
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 43 46788889999999999998887766543
No 66
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=62.16 E-value=59 Score=32.15 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=71.5
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.++++.. . .+..+|+..|...+..+...+. ..++.++|++...++-+. -....+++++..|+..+..
T Consensus 15 ~p~~~a~~~~---~----~~~~~Ty~el~~~~~~~A~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl 84 (504)
T 1t5h_X 15 APDHCALAVP---A----RGLRLTHAELRARVEAVAARLH--ADGLRPQQRVAVVAPNSA-DVVIAILALHRLGAVPALL 84 (504)
T ss_dssp CTTSEEEEET---T----TTEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSCH-HHHHHHHHHHHHTCEEEEE
T ss_pred CCCceEEEEc---C----CCceeEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCcEEEec
Confidence 3566776642 1 1357899999888888776553 346889999999988773 2344577889999998877
Q ss_pred cC--CHHHHHHHhhhhCCeEEec--CcHHHHHH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCA--VPRVLDRI 328 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~--~P~~l~~l 328 (507)
+. .++.+...+++.++..++. .+.....+
T Consensus 85 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 85 NPRLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp CTTSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred CCccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 65 7889999999999999988 66554443
No 67
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=61.77 E-value=70 Score=32.33 Aligned_cols=102 Identities=14% Similarity=0.008 Sum_probs=74.9
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccc-cCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEE
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNE-KLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGF 298 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l 298 (507)
.++.++++.... .| ....+|...+...+..+...+. .. ++.++|++...++-.. -....+++++..|+..+.
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~--~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Ga~~vp 128 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLS--GACGLQRGDRVAVVLPRVP-EWWLVILGCIRAGLIFMP 128 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHH--TTTCCCTTCEEEEECCSCH-HHHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHH--HccCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEe
Confidence 456777765421 12 2357899999888888776552 23 6788999999988773 233457788999999887
Q ss_pred ecC--CHHHHHHHhhhhCCeEEecCcHHHHHH
Q 010568 299 WRG--DVKLLLEDIGELKPTIFCAVPRVLDRI 328 (507)
Q Consensus 299 ~~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l 328 (507)
.+. .++.+...++..++.++++.+.....+
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 129 GTIQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp CCTTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred cCCCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 765 788999999999999999988766554
No 68
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=61.15 E-value=63 Score=32.60 Aligned_cols=95 Identities=3% Similarity=-0.047 Sum_probs=71.4
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.++++.. .-.+|+..+...+..+...+. ..++.++|++...++-+. -....+++++..|+..+..
T Consensus 52 ~p~~~Al~~~---------~~~~Ty~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl 119 (563)
T 1amu_A 52 RPNNVAIVCE---------NEQLTYHELNVKANQLARIFI--EKGIGKDTLVGIMMEKSI-DLFIGILAVLKAGGAYVPI 119 (563)
T ss_dssp CTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEeC---------CceecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEe
Confidence 3566776531 246899999888887776553 347888999999988773 2334577889999998877
Q ss_pred cC--CHHHHHHHhhhhCCeEEecCcHHHH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCAVPRVLD 326 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~~P~~l~ 326 (507)
+. .++.+...++..++.+++..+....
T Consensus 120 ~~~~~~~~l~~il~~~~~~~li~~~~~~~ 148 (563)
T 1amu_A 120 DIEYPKERIQYILDDSQARMLLTQKHLVH 148 (563)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECGGGHH
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEcCchhh
Confidence 65 7889999999999999998876544
No 69
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=58.46 E-value=61 Score=28.01 Aligned_cols=53 Identities=11% Similarity=-0.092 Sum_probs=36.6
Q ss_pred CcEEEEecCh-HHHHHHHHHH-HHHHcCCEEEEecC--CHHHHHHHhhhhCCeEEec
Q 010568 268 EDVYVSYLPL-AHIFDRAIEE-VFISNGAAIGFWRG--DVKLLLEDIGELKPTIFCA 320 (507)
Q Consensus 268 ~d~~l~~~pl-~h~~g~~~~~-~~l~~G~~v~l~~~--~~~~~~~~i~~~~vt~l~~ 320 (507)
+..++...+- .|..|..++- ..-..|..++.... +++.+++.+.+++++++..
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEE
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 3344444443 2778877644 44567777766543 8999999999999998777
No 70
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=57.91 E-value=56 Score=33.16 Aligned_cols=97 Identities=7% Similarity=-0.025 Sum_probs=73.7
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.+|++..... | ....+|...|...+..+...+. ..++.++|++...++-..- ....+++++..|+..+..
T Consensus 69 ~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~--~~Gv~~Gd~V~l~~~~~~e-~~~~~lA~~~~Gav~vpl 141 (580)
T 3etc_A 69 SPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFV--KHGIGKGDYVMLTLKSRYD-FWYCMLGLHKLGAIAVPA 141 (580)
T ss_dssp CTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECTTCTH-HHHHHHHHHHHTCEEEEC
T ss_pred CCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCEEEEeC
Confidence 4678888765321 2 2467899999888888777653 4478899999999887732 234577889999998877
Q ss_pred cC--CHHHHHHHhhhhCCeEEecCcH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCAVPR 323 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~~P~ 323 (507)
.. .++.+...++..++.++++.+.
T Consensus 142 ~~~~~~~~l~~~l~~~~~~~ii~~~~ 167 (580)
T 3etc_A 142 THMLKTRDIVYRIEKAGLKMIVCIAE 167 (580)
T ss_dssp CTTCCHHHHHHHHHHHTCCEEEEESS
T ss_pred CccCCHHHHHHHHHhcCCCEEEEecc
Confidence 65 8899999999999999998664
No 71
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=54.19 E-value=76 Score=31.38 Aligned_cols=86 Identities=16% Similarity=0.050 Sum_probs=67.6
Q ss_pred eeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEecC--CHHHHHHHhhhhCCeE
Q 010568 240 VMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRG--DVKLLLEDIGELKPTI 317 (507)
Q Consensus 240 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~~--~~~~~~~~i~~~~vt~ 317 (507)
-.+|+..|...+..+...+. ..++.++|++...++-+. .....+++++..|+..+..+. ..+.+...++..++.+
T Consensus 27 ~~~Ty~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~ 103 (503)
T 4fuq_A 27 DKISYAELVARAGRVANVLV--ARGLQVGDRVAAQTEKSV-EALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKI 103 (503)
T ss_dssp CEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSE
T ss_pred cEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 35899999888888777553 347889999999988873 234457788999999887765 8899999999999999
Q ss_pred EecCcHHHHHH
Q 010568 318 FCAVPRVLDRI 328 (507)
Q Consensus 318 l~~~P~~l~~l 328 (507)
+++.+.....+
T Consensus 104 vi~~~~~~~~~ 114 (503)
T 4fuq_A 104 VVCDPSKRDGI 114 (503)
T ss_dssp EEECGGGTTTT
T ss_pred EEECchhhHHH
Confidence 99987755443
No 72
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=53.54 E-value=61 Score=30.41 Aligned_cols=64 Identities=8% Similarity=-0.072 Sum_probs=49.6
Q ss_pred HHCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 96 RTCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 96 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
.+.| +++|.+..+.....-.-+.+.++|.+.|.-+..+-|...+......++..++++++++..
T Consensus 78 ~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 78 EEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp HHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 3444 578877666777777778888999999998777767666667778899999999998653
No 73
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=52.86 E-value=51 Score=32.88 Aligned_cols=87 Identities=5% Similarity=-0.143 Sum_probs=68.2
Q ss_pred eeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEecC--CHHHHHHHhhhhCCeE
Q 010568 240 VMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRG--DVKLLLEDIGELKPTI 317 (507)
Q Consensus 240 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~~--~~~~~~~~i~~~~vt~ 317 (507)
..+|+..|...+..+...+. ..++.++|++...++-+.- ....+++++..|+..+..+. .++.+...++..++..
T Consensus 47 ~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 123 (529)
T 2v7b_A 47 GSTTYGELEERARRFASALR--TLGVHPEERILLVMLDTVA-LPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARA 123 (529)
T ss_dssp CEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSTH-HHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSE
T ss_pred CCccHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcHH-HHHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeE
Confidence 46899999888888776553 3467889999999887732 34457788999999887765 8899999999999999
Q ss_pred EecCcHHHHHHH
Q 010568 318 FCAVPRVLDRIY 329 (507)
Q Consensus 318 l~~~P~~l~~l~ 329 (507)
++..+.....+.
T Consensus 124 vi~~~~~~~~~~ 135 (529)
T 2v7b_A 124 VIASGALVQNVT 135 (529)
T ss_dssp EEEEGGGHHHHH
T ss_pred EEechhhhhHHH
Confidence 999887665543
No 74
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=49.37 E-value=51 Score=29.73 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=51.0
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhH
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWI 117 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 117 (507)
.++++..+.-|+...+++. |.....|-..|..++.+++.+.++.|.+.|.+ ..++.-|+...+
T Consensus 19 tv~~~i~~~lP~~~~iy~~---D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~~----~IVIACNTa~~~ 81 (269)
T 3ist_A 19 TVVREVLKQLPHEQVYYLG---DTARCPYGPRDKEEVAKFTWEMTNFLVDRGIK----MLVIACNTATAA 81 (269)
T ss_dssp HHHHHHHHHCTTCCEEEEE---CGGGCCCTTSCHHHHHHHHHHHHHHHHHTTCS----EEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCcEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCCccHH
Confidence 4566667789999999988 88878888899999999999999999998763 555566676654
No 75
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=48.87 E-value=43 Score=37.96 Aligned_cols=123 Identities=12% Similarity=0.060 Sum_probs=83.1
Q ss_pred CCCCCceeeEeeccCcCCceE--EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh-HHHHHHHHhcCCEEeec
Q 010568 57 NPNNRMLGQREIVDGKAGKYV--WKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW-IIGMEACNALGLHCVPL 133 (507)
Q Consensus 57 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l 133 (507)
.|+.+|++... .|.+|..+ .+|.+.+... .......++.++|++..+.+-+-+. +.-+++.+..|+.++..
T Consensus 605 ~~~~~ayiiyT--SGSTG~PKgV~~~h~~l~~~----~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 678 (1304)
T 2vsq_A 605 DPNDPAYIMYT--SGTTGKPKGNITTHANIQGL----VKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIA 678 (1304)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEEHHHHHHH----HSSCCSSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEeC--CCCCCCCCEEEEehHHHHHH----HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEEC
Confidence 46778877652 45555443 5788877542 1122235788999998888776544 34577888899988877
Q ss_pred cC--CCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCC
Q 010568 134 YD--TLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVK 185 (507)
Q Consensus 134 ~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 185 (507)
++ ..+++.+...++..++.+++........+.+......+.++.++.-+...
T Consensus 679 ~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~lr~~~~gGe~l 732 (1304)
T 2vsq_A 679 DEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGEDWMKGLRCILFGGERA 732 (1304)
T ss_dssp CGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCSHHHHTCSEEEEESSCC
T ss_pred ChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhchhcCCCccEEEEecCCC
Confidence 65 35788999999999999999887666655443332235667777666543
No 76
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=47.29 E-value=70 Score=32.14 Aligned_cols=123 Identities=14% Similarity=-0.028 Sum_probs=77.1
Q ss_pred CCCceeeEeeccCcCCceE--EEeHHHHHHHHHHHHHHHHH-----CCCCCCCEEEEEeCCchhh-HHHHHHHHhcCCEE
Q 010568 59 NNRMLGQREIVDGKAGKYV--WKTYKEVYDLVIKVVNAIRT-----CGVEERGKCGIYGVNCPEW-IIGMEACNALGLHC 130 (507)
Q Consensus 59 d~~a~~~~~~~~~~~~~~~--~~Ty~el~~~~~~~a~~L~~-----~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~ 130 (507)
+.+|++... .|.++..+ .+|.+.+...+..++..+.. ..+...+++....+...+. +..++.++..|+..
T Consensus 175 ~~~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 252 (562)
T 3ite_A 175 NLDAYLLYT--SGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCA 252 (562)
T ss_dssp TSEEEEEEE--CC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEE
T ss_pred CCcEEEEEC--CCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEE
Confidence 444555442 45544433 58999998888887776542 3567778887777665443 44467788889887
Q ss_pred eeccCCCChHHHHHHHhhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCC
Q 010568 131 VPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184 (507)
Q Consensus 131 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 184 (507)
+........+.+...++..++.+++.....+..... .....+.++.++.-...
T Consensus 253 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~-~~~~~~~lr~~~~gG~~ 305 (562)
T 3ite_A 253 VTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGL-VPEDAPHLVYLGVGGEK 305 (562)
T ss_dssp EECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTC-CGGGSTTCCEEEEESSC
T ss_pred EecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhccc-CccccCceEEEEEecCC
Confidence 765543344667788999999999887654433222 22233667777666544
No 77
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=45.25 E-value=88 Score=29.03 Aligned_cols=77 Identities=16% Similarity=0.087 Sum_probs=52.5
Q ss_pred EeHHHHHHHHHHHH---HHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEE
Q 010568 79 KTYKEVYDLVIKVV---NAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAF 155 (507)
Q Consensus 79 ~Ty~el~~~~~~~a---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 155 (507)
+++.+......... +.++..++++|++|+|...-..-..++++|....|+.++.+.. +++. ..+.+..+++.+|
T Consensus 137 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~--~~~r-~~~~~~~Ga~~~i 213 (348)
T 4eez_A 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI--NQDK-LNLAKKIGADVTI 213 (348)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES--CHHH-HHHHHHTTCSEEE
T ss_pred CCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC--cHHH-hhhhhhcCCeEEE
Confidence 66766544433332 3455678999999999987777777777777777887777765 3443 3556788888877
Q ss_pred ecC
Q 010568 156 VEE 158 (507)
Q Consensus 156 ~~~ 158 (507)
-..
T Consensus 214 ~~~ 216 (348)
T 4eez_A 214 NSG 216 (348)
T ss_dssp EC-
T ss_pred eCC
Confidence 543
No 78
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=45.05 E-value=1e+02 Score=30.54 Aligned_cols=81 Identities=11% Similarity=0.003 Sum_probs=62.3
Q ss_pred eeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEecC--CHHHHHHHhhhhCCeE
Q 010568 240 VMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRG--DVKLLLEDIGELKPTI 317 (507)
Q Consensus 240 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~~--~~~~~~~~i~~~~vt~ 317 (507)
-.+|+..+...+..+...+. ..++.++|++...++-.. -.+..+++++..|+..+..+. .++.+...++..++..
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~--~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 104 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFID--SLALLAKSPVLVFGAQTY-DMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSL 104 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHH--HTCCCTTCCEEEEECSSH-HHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSE
T ss_pred CeecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCE
Confidence 45899999888888776553 346788898888888763 234457788999998887655 8899999999999999
Q ss_pred EecCcH
Q 010568 318 FCAVPR 323 (507)
Q Consensus 318 l~~~P~ 323 (507)
++....
T Consensus 105 ii~~~~ 110 (521)
T 3l8c_A 105 IIAIEE 110 (521)
T ss_dssp EEESSC
T ss_pred EEecCc
Confidence 987654
No 79
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=44.60 E-value=1.1e+02 Score=33.43 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=74.7
Q ss_pred CCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEe
Q 010568 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFW 299 (507)
Q Consensus 220 ~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~ 299 (507)
.++.++++.. .+| -.+|+..|...+..+...+. ..++.++|++...++-+. -.+..+++++..|+..+..
T Consensus 74 ~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~ns~-e~~v~~lA~~~~Ga~~vpl 143 (979)
T 3tsy_A 74 FATKPCLING---PTG----HVYTYSDVHVISRQIAANFH--KLGVNQNDVVMLLLPNCP-EFVLSFLAASFRGATATAA 143 (979)
T ss_dssp TTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECSSCH-HHHHHHHHHHHHTCEEEEE
T ss_pred CCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHHHH--HcCCCCcCEEEEEeCCCH-HHHHHHHHHHHcCCEEEee
Confidence 4677777642 222 46899999888888776553 347889999999998873 3344577889999998877
Q ss_pred cC--CHHHHHHHhhhhCCeEEecCcHHHHHH
Q 010568 300 RG--DVKLLLEDIGELKPTIFCAVPRVLDRI 328 (507)
Q Consensus 300 ~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l 328 (507)
+. .++.+...++..++.+++..+.....+
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 174 (979)
T 3tsy_A 144 NPFFTPAEIAKQAKASNTKLIITEARYVDKI 174 (979)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECSTTTTTS
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEChHHHHHH
Confidence 65 889999999999999999887765443
No 80
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=43.95 E-value=1e+02 Score=29.96 Aligned_cols=63 Identities=6% Similarity=-0.062 Sum_probs=46.7
Q ss_pred HHCCC-CCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecC
Q 010568 96 RTCGV-EERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 96 ~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
.+.|. ++|....+....+-.-..+.++|.+.|.-++.+-|......-...++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 45564 7786555555566677777788999999877666665566667788999999999974
No 81
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=43.32 E-value=1.1e+02 Score=28.16 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=44.1
Q ss_pred HHCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 96 RTCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 96 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
.+.| +++|....+....+-.-..+.++|.+.|.-++.+-|...+......++..++++++++..
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 4556 467754444455566666777788899997776655545556667788999999998753
No 82
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=40.17 E-value=1.4e+02 Score=27.30 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=42.8
Q ss_pred HHHCCC-CCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 95 IRTCGV-EERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 95 L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
+.+.|. ++|+.|.. ...+-.-..+.++|.+.|.-++.+-|...+......++..++++++++..
T Consensus 58 a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 58 AEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 344554 67766544 44455556666778899987776655544555666788999999998753
No 83
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=40.06 E-value=88 Score=28.73 Aligned_cols=75 Identities=9% Similarity=-0.011 Sum_probs=48.1
Q ss_pred EeHHHHHHHHHHH---HHHHHHCCCCCCCEEEEEeCCc-hhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIKV---VNAIRTCGVEERGKCGIYGVNC-PEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~~---a~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+........ .+.|...++++|++|+|....+ .-..++.+| ...|+.++.+. +.++ ..+++..+++.+
T Consensus 126 ~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a-~~~Ga~vi~~~---~~~~-~~~~~~lGa~~~ 200 (321)
T 3tqh_A 126 LSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLA-KQKGTTVITTA---SKRN-HAFLKALGAEQC 200 (321)
T ss_dssp SCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEE---CHHH-HHHHHHHTCSEE
T ss_pred CCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHH-HHcCCEEEEEe---ccch-HHHHHHcCCCEE
Confidence 5777765443332 2445567899999999997555 445555544 56788766554 3445 566778899887
Q ss_pred EecC
Q 010568 155 FVEE 158 (507)
Q Consensus 155 i~~~ 158 (507)
|-..
T Consensus 201 i~~~ 204 (321)
T 3tqh_A 201 INYH 204 (321)
T ss_dssp EETT
T ss_pred EeCC
Confidence 7543
No 84
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=39.31 E-value=69 Score=30.31 Aligned_cols=60 Identities=15% Similarity=-0.072 Sum_probs=39.9
Q ss_pred HHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC-----CChHHHHHHHhhcC--ccEEEe
Q 010568 94 AIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT-----LGAGAVEFIICHSG--VSIAFV 156 (507)
Q Consensus 94 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~--~~~vi~ 156 (507)
.|..+++++||.|.+-.+....+. -++...|+.++.++.. .+.+++...+..-+ .++|+.
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~ 135 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPATP---LAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVP 135 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECC
T ss_pred HHHHcCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEE
Confidence 345557899999988776665543 4566789887766532 36778888774334 666664
No 85
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=37.40 E-value=1.5e+02 Score=29.54 Aligned_cols=87 Identities=8% Similarity=-0.152 Sum_probs=67.1
Q ss_pred eeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChHHHHHHHHHHHHHHcCCEEEEecC--C-------HHHHHHH
Q 010568 239 GVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRG--D-------VKLLLED 309 (507)
Q Consensus 239 ~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~v~l~~~--~-------~~~~~~~ 309 (507)
.-.+|+..|...+..+...+. ..++.++|++...++-+. -....+++++..|+..+..+. . ...+...
T Consensus 47 ~~~~Ty~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~ 123 (576)
T 3gqw_A 47 EDQLEYQTLKARAEAGAKRLL--SLNLKKGDRVALIAETSS-EFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGL 123 (576)
T ss_dssp EEEEEHHHHHHHHHHHHHHHH--HTCCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHH
T ss_pred eeEEcHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHH
Confidence 357899999988888777553 347889999999988873 234457788999999887754 3 5788888
Q ss_pred hhhhCCeEEecCcHHHHHH
Q 010568 310 IGELKPTIFCAVPRVLDRI 328 (507)
Q Consensus 310 i~~~~vt~l~~~P~~l~~l 328 (507)
++..++..++........+
T Consensus 124 l~~~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 124 LASCQPAAIITGDEWLPLV 142 (576)
T ss_dssp HHHHCCSEEEECGGGHHHH
T ss_pred HHhcCCCEEEecHHHHHHH
Confidence 9999999999988766554
No 86
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=36.71 E-value=1.5e+02 Score=26.93 Aligned_cols=64 Identities=9% Similarity=-0.045 Sum_probs=42.1
Q ss_pred HHHCCC-CCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 95 IRTCGV-EERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 95 L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
+.+.|. ++|+.|.. ...+-.-..+.++|.+.|.-++.+-|...+..-...++..++++++++..
T Consensus 56 a~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 56 AEKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 334454 67765544 44445556666778889987766655444455566788999999998753
No 87
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=35.99 E-value=1.3e+02 Score=27.83 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=49.0
Q ss_pred EeHHHHHHHHHH---HHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEE
Q 010568 79 KTYKEVYDLVIK---VVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAF 155 (507)
Q Consensus 79 ~Ty~el~~~~~~---~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 155 (507)
+++.+....... ..+.|...++++|++|+|...-..-.+++.+|- ..|+.++.+.. +++.+. +++..+++.++
T Consensus 140 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~i 215 (340)
T 3s2e_A 140 VGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKLN-LARRLGAEVAV 215 (340)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHHH-HHHHTTCSEEE
T ss_pred CCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHHH-HHHHcCCCEEE
Confidence 677765533222 224455678999999999876555666665555 56887776654 444444 56788888877
Q ss_pred ecC
Q 010568 156 VEE 158 (507)
Q Consensus 156 ~~~ 158 (507)
-..
T Consensus 216 ~~~ 218 (340)
T 3s2e_A 216 NAR 218 (340)
T ss_dssp ETT
T ss_pred eCC
Confidence 543
No 88
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=35.35 E-value=1.2e+02 Score=28.24 Aligned_cols=78 Identities=13% Similarity=-0.020 Sum_probs=48.0
Q ss_pred EeHHHHHHHH--HHHH-HHHHH-CCCCCCCEEEEEeCCc-hhhHHHHHHHHhcCCEE-eeccCCCChHHHHHHHhhcCcc
Q 010568 79 KTYKEVYDLV--IKVV-NAIRT-CGVEERGKCGIYGVNC-PEWIIGMEACNALGLHC-VPLYDTLGAGAVEFIICHSGVS 152 (507)
Q Consensus 79 ~Ty~el~~~~--~~~a-~~L~~-~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~-v~l~~~~~~~~l~~~l~~~~~~ 152 (507)
+++.+..... -..| +.|.+ .++++|++|+|....+ +-.+++.+|- ..|+.+ +........++...+++..+++
T Consensus 140 l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~ 218 (357)
T 1zsy_A 140 IPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALGLRTINVVRDRPDIQKLSDRLKSLGAE 218 (357)
T ss_dssp SCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEECCCSCHHHHHHHHHHTTCS
T ss_pred CCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHH-HcCCEEEEEecCccchHHHHHHHHhcCCc
Confidence 5777654421 1122 34444 5899999999998744 5555555554 568754 4444443444555667788998
Q ss_pred EEEec
Q 010568 153 IAFVE 157 (507)
Q Consensus 153 ~vi~~ 157 (507)
.+|..
T Consensus 219 ~vi~~ 223 (357)
T 1zsy_A 219 HVITE 223 (357)
T ss_dssp EEEEH
T ss_pred EEEec
Confidence 88753
No 89
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=34.79 E-value=2.1e+02 Score=25.93 Aligned_cols=64 Identities=6% Similarity=-0.049 Sum_probs=42.1
Q ss_pred HHHCC-CCCCC--EEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 95 IRTCG-VEERG--KCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 95 L~~~g-v~~gd--~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
+.+.| +++|+ .|.. ...+-.-..+.++|.+.|.-++.+-|...+..-...++..++++++++..
T Consensus 51 a~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 51 AEERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33445 46776 4333 34444555666778899987766655544556667788999999998865
No 90
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=34.78 E-value=2e+02 Score=26.15 Aligned_cols=63 Identities=10% Similarity=-0.057 Sum_probs=43.0
Q ss_pred HHCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 96 RTCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 96 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
.+.| +++|+.|.... .+-.-..+.++|.+.|.-++.+-|...+......++..++++++++..
T Consensus 53 ~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 53 EKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp HHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 36776655544 345555666778899987776666555555667788999999999863
No 91
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=34.70 E-value=1.4e+02 Score=22.97 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=40.3
Q ss_pred HHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeec--cCCCChHHHHH
Q 010568 92 VNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPL--YDTLGAGAVEF 144 (507)
Q Consensus 92 a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~ 144 (507)
+.+|.+.|+.+...+.+...+..+.+.++-=++++|...+.+ .+..+..+.++
T Consensus 47 ~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~~RR 101 (119)
T 1ofu_X 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQ 101 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHHH
T ss_pred HHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHHHHH
Confidence 678888999988888888888889999999999998754333 34566655443
No 92
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=33.92 E-value=1.3e+02 Score=27.74 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=41.9
Q ss_pred HHH-HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEec
Q 010568 93 NAI-RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVE 157 (507)
Q Consensus 93 ~~L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 157 (507)
+.| ...++++|++|+|....+.--..+...+...|+.++.+.. +.+.+....+..+++.++..
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~~ 202 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG--GAEKCRFLVEELGFDGAIDY 202 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHTTCCSEEEET
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHcCCCEEEEC
Confidence 345 3468999999999998654444444444567987766654 45666655478888776643
No 93
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=33.60 E-value=1.2e+02 Score=28.19 Aligned_cols=60 Identities=7% Similarity=-0.038 Sum_probs=39.0
Q ss_pred CCCCCCEEEEEeCCch------hhHHHHHH-HHhcCCEEeeccCCC------------ChHHHHHHHhhcCccEEEecC
Q 010568 99 GVEERGKCGIYGVNCP------EWIIGMEA-CNALGLHCVPLYDTL------------GAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 99 gv~~gd~V~i~~~n~~------~~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~vi~~~ 158 (507)
-+++||+|+|++|.+. +.+..... +-..|..++.-+... -.+++..++.+-.++.|++..
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 86 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI 86 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 4789999999999863 12222222 334587776443221 224677888888999999875
No 94
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=33.58 E-value=1.6e+02 Score=27.65 Aligned_cols=61 Identities=10% Similarity=0.019 Sum_probs=40.5
Q ss_pred HHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC----CChHHHHHHHhhc--CccEEEecC
Q 010568 95 IRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT----LGAGAVEFIICHS--GVSIAFVEE 158 (507)
Q Consensus 95 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~--~~~~vi~~~ 158 (507)
++..++++||.|.+..+....+... +...|+.++.++.. .+.+++...++.. ++++|++..
T Consensus 64 ~~~l~~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 64 LRVAGVKQDDIVLASSFTFIASVAP---ICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HHHTTCCTTCEEEEESSSCGGGTHH---HHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HHHcCCCCCCEEEECCCccHHHHHH---HHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 3344578999998888877766543 44578877666542 4667888877754 566666653
No 95
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=33.34 E-value=1.5e+02 Score=27.54 Aligned_cols=62 Identities=13% Similarity=0.004 Sum_probs=41.0
Q ss_pred HCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 97 TCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 97 ~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
+.| +++|+.|.... .+-.-..+.++|...|.-++.+-|...+......++..++++++++..
T Consensus 71 ~~g~~~~g~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 71 KDGRLKPGMEIIEST-SGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHTSSCTTCEEEEEC-SSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 345 46776555443 344455666777788987666555544555667788999999998753
No 96
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=32.87 E-value=1e+02 Score=28.79 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=46.8
Q ss_pred EeHHHHHHHHHH---HHHHHHHCCCC-CCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIK---VVNAIRTCGVE-ERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~---~a~~L~~~gv~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+....... ..+.|.+.+++ +|++|+|...-.+-..++.+|- ..|+.++.+.. +.+.+....+..+++.+
T Consensus 153 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v 229 (357)
T 2cf5_A 153 MAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAK-AMGHHVTVISS--SNKKREEALQDLGADDY 229 (357)
T ss_dssp CCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEES--STTHHHHHHTTSCCSCE
T ss_pred CCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--ChHHHHHHHHHcCCcee
Confidence 677664322211 12345667888 9999999976445555555554 46887666654 34445444447888777
Q ss_pred EecC
Q 010568 155 FVEE 158 (507)
Q Consensus 155 i~~~ 158 (507)
+...
T Consensus 230 i~~~ 233 (357)
T 2cf5_A 230 VIGS 233 (357)
T ss_dssp EETT
T ss_pred eccc
Confidence 6543
No 97
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=32.48 E-value=55 Score=29.58 Aligned_cols=63 Identities=11% Similarity=0.109 Sum_probs=49.2
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhH
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWI 117 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 117 (507)
.++++..+.-|+...+... |.....|-.-+|.++.+++.+.++.|.+.|.+ ..++.-|+...+
T Consensus 38 tv~~~i~~~lP~e~~iy~~---D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~d----~IVIACNTa~~~ 100 (274)
T 3uhf_A 38 SVLKSLYEARLFDEIIYYG---DTARVPYGVKDKDTIIKFCLEALDFFEQFQID----MLIIACNTASAY 100 (274)
T ss_dssp HHHHHHHHTTCCSEEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCS----EEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCChhHH
Confidence 4566666678999998888 87777777789999999999999999887763 556666676644
No 98
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=32.39 E-value=1.6e+02 Score=26.95 Aligned_cols=64 Identities=13% Similarity=0.023 Sum_probs=42.3
Q ss_pred HHHCCC-CCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 95 IRTCGV-EERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 95 L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
+.+.|. ++|+.|.-. ..+-.-..+.++|.+.|.-++.+-|...+......++..++++++++..
T Consensus 53 a~~~g~~~~~~~vv~~-ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 53 AEKDGTLTKGKEIVDA-TSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHTTSSCTTCEEEES-CCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344454 666655444 3455556666778889987666555445555667788999999998764
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=31.71 E-value=1.8e+02 Score=29.02 Aligned_cols=61 Identities=13% Similarity=0.018 Sum_probs=44.4
Q ss_pred HCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecC
Q 010568 97 TCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 97 ~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
+.| +++|+.|.- ...+-.-..+.++|...|.-++.+-|...+..-...++..+++++++..
T Consensus 106 ~~g~~~~g~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 106 EQGLLKPGYTIIE-PTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HcCCCCCCCEEEE-eCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 445 578887654 4445556777778889999877666665556666778999999999875
No 100
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=31.06 E-value=1.4e+02 Score=27.71 Aligned_cols=60 Identities=18% Similarity=0.138 Sum_probs=39.2
Q ss_pred CCCCCCEEEEEeCCchh------hHHHHHH-HHhcCCEEeeccCCC------------ChHHHHHHHhhcCccEEEecC
Q 010568 99 GVEERGKCGIYGVNCPE------WIIGMEA-CNALGLHCVPLYDTL------------GAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 99 gv~~gd~V~i~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~vi~~~ 158 (507)
-+++||+|+|++|.++- .+..... +-..|..++.-.... -.+++..++.+-++++|++..
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 87 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI 87 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 47899999999999842 2222222 234688776532111 124677777878899999876
No 101
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=30.76 E-value=2.4e+02 Score=25.93 Aligned_cols=63 Identities=11% Similarity=-0.022 Sum_probs=44.7
Q ss_pred HHCC-CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 96 RTCG-VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 96 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
.+.| +++++.|.-. ..+-.-..+.++|.+.|.-++.+-|...+......++..++++++++..
T Consensus 65 ~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 65 EADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3445 4677776553 4455667777888888987776666555566667789999999999863
No 102
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=30.71 E-value=2.4e+02 Score=25.84 Aligned_cols=60 Identities=10% Similarity=0.055 Sum_probs=39.9
Q ss_pred HHH-CCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEec
Q 010568 95 IRT-CGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVE 157 (507)
Q Consensus 95 L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 157 (507)
+.+ .++++|++|+|....+.--.++...+...|+.++.+.. +.+.+. .++..+++.++..
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCSEEEET
T ss_pred HHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 444 47899999999985554444444444567887776664 455554 5677888877754
No 103
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=30.71 E-value=1e+02 Score=29.68 Aligned_cols=51 Identities=8% Similarity=-0.098 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHC--CCCCCCEEEEEeCCc-hh-hHHHHHHHHhcCCEEeecc
Q 010568 84 VYDLVIKVVNAIRTC--GVEERGKCGIYGVNC-PE-WIIGMEACNALGLHCVPLY 134 (507)
Q Consensus 84 l~~~~~~~a~~L~~~--gv~~gd~V~i~~~n~-~~-~~~~~lA~~~~G~~~v~l~ 134 (507)
+..+.+++|..+.+. ++++|+.|.|..+.. .+ .-++.-++.++|+.++.+.
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 58 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 58 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 356778889888874 679999999998865 22 3345556778899877654
No 104
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=30.50 E-value=1.1e+02 Score=21.32 Aligned_cols=46 Identities=17% Similarity=0.134 Sum_probs=34.9
Q ss_pred EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCE
Q 010568 77 VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLH 129 (507)
Q Consensus 77 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 129 (507)
..+.+.+|.+ .+.+++..+++.|.++|.....+..+...+...|..
T Consensus 22 ~~ip~~~l~~-------~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKE-------RIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHH-------HHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHH-------HHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 5678877754 344456778899999999988888787888888864
No 105
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=30.45 E-value=1.6e+02 Score=27.51 Aligned_cols=63 Identities=11% Similarity=-0.015 Sum_probs=43.0
Q ss_pred HHHHH--CCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecC
Q 010568 93 NAIRT--CGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 93 ~~L~~--~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
+.|.+ .++++|++|+|...-.+-.+++.+|-...|+.++.+.. +++.+. +++..+++.+|-..
T Consensus 175 ~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi~~~ 239 (359)
T 1h2b_A 175 RAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKLK-LAERLGADHVVDAR 239 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHHH-HHHHTTCSEEEETT
T ss_pred HHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHHH-HHHHhCCCEEEecc
Confidence 44666 78999999999988556666666665443887666654 344443 45678898887544
No 106
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=29.97 E-value=1.7e+02 Score=23.97 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=37.7
Q ss_pred HHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeec--cCCCChHHHHH
Q 010568 92 VNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPL--YDTLGAGAVEF 144 (507)
Q Consensus 92 a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~ 144 (507)
+.+|.+.|+.+...+.+...+..+.+.++-=|+++|...+.+ .+..+..+.++
T Consensus 89 ~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~aVl~Wl~~l~~~~~RR 143 (161)
T 1oft_A 89 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQ 143 (161)
T ss_dssp HHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH
T ss_pred HHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCccEEEECCCcCChHHHHH
Confidence 677888888887777777777788888888888888743333 44556555443
No 107
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=29.94 E-value=1e+02 Score=27.73 Aligned_cols=62 Identities=13% Similarity=0.047 Sum_probs=48.1
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW 116 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~ 116 (507)
.+++...+.-|+...+... |.....|-.-+|.++.+++.+.++.|.+.|.+ ..++.-|+...
T Consensus 21 tv~~~i~~~lp~~~~iy~~---D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~----~iVIACNTa~~ 82 (268)
T 3out_A 21 TIVKNLMSILPNEDIIYFG---DIARIPYGTKSRATIQKFAAQTAKFLIDQEVK----AIIIACNTISA 82 (268)
T ss_dssp HHHHHHHHHCTTCCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCS----EEEECCHHHHH
T ss_pred HHHHHHHHHCCCCcEEEec---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCChHH
Confidence 3455555678988888887 77777777789999999999999999998763 55555666665
No 108
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=29.52 E-value=1.8e+02 Score=26.09 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=47.8
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCchhh
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRT-CGVEERGKCGIYGVNCPEW 116 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~ 116 (507)
.++++-.+..|+...+++. |.....+-..+..++.+++.+.++.|.+ .|.+ ..++.-|+...
T Consensus 17 tv~~~i~~~lP~~~~iy~~---D~~~~PyG~~s~~~i~~~~~~~~~~L~~~~g~d----~iViACNTas~ 79 (272)
T 1zuw_A 17 TVAKEIMRQLPKENIIYVG---DTKRCPYGPRPEEEVLQYTWELTNYLLENHHIK----MLVIACNTATA 79 (272)
T ss_dssp HHHHHHHHHSTTCCEEEEE---CGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCCS----EEEECCHHHHH
T ss_pred HHHHHHHHhCCCCcEEEec---cCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCC----EEEEeCchhhH
Confidence 5677777789999888877 7666666668999999999999999998 8763 45555556553
No 109
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=29.30 E-value=1.5e+02 Score=28.06 Aligned_cols=60 Identities=10% Similarity=0.070 Sum_probs=39.5
Q ss_pred CCCCCCEEEEEeCCchh------hHHHHHH-HHhcCCEEeeccCCC------------ChHHHHHHHhhcCccEEEecC
Q 010568 99 GVEERGKCGIYGVNCPE------WIIGMEA-CNALGLHCVPLYDTL------------GAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 99 gv~~gd~V~i~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~vi~~~ 158 (507)
-+++||+|+|++|.++- .+..... +-..|..++.-+... -.+++..++.+-++++|++..
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 58999999999999842 2222222 234688776543221 224677777778889999876
No 110
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.24 E-value=1.5e+02 Score=27.43 Aligned_cols=60 Identities=8% Similarity=0.005 Sum_probs=39.4
Q ss_pred CCCCCCEEEEEeCCchhh------HHHHHHH-HhcCCEEeeccCCC------------ChHHHHHHHhhcCccEEEecC
Q 010568 99 GVEERGKCGIYGVNCPEW------IIGMEAC-NALGLHCVPLYDTL------------GAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 99 gv~~gd~V~i~~~n~~~~------~~~~lA~-~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~vi~~~ 158 (507)
-+++||+|+|++|.+.-. +...... -..|..++.-+... -.+++..++.+-++++|++..
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 86 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL 86 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 478999999999998532 2222222 34688877543211 224677778888899999875
No 111
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=29.23 E-value=1.7e+02 Score=26.15 Aligned_cols=62 Identities=13% Similarity=0.145 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW 116 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~ 116 (507)
.++++..+..|+...++.. |.....+-..++.++.+++.+.++.|.+.|. | ..++.-|+...
T Consensus 17 tv~~~i~~~lP~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~---d-~iviaCNTas~ 78 (267)
T 2gzm_A 17 TVAKELIRQLPKERIIYLG---DTARCPYGPRSREEVRQFTWEMTEHLLDLNI---K-MLVIACNTATA 78 (267)
T ss_dssp HHHHHHHHHCTTSCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC---S-EEEECCHHHHH
T ss_pred HHHHHHHHHCCCCCEEEec---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---C-EEEEeCchhhH
Confidence 4566666779999888877 7666666667999999999999999998776 3 44555556553
No 112
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=28.97 E-value=1.3e+02 Score=27.44 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=46.9
Q ss_pred EeHHHHHHHHHHHH---HHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEE
Q 010568 79 KTYKEVYDLVIKVV---NAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAF 155 (507)
Q Consensus 79 ~Ty~el~~~~~~~a---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 155 (507)
+++.+.......++ +.|...++++|++|+|...-..-.+++.+| ...|+.++.+. +.+.+ .+++..+++.++
T Consensus 116 ~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla-k~~Ga~Vi~~~---~~~~~-~~~~~lGa~~v~ 190 (315)
T 3goh_A 116 LSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQML-NNAGYVVDLVS---ASLSQ-ALAAKRGVRHLY 190 (315)
T ss_dssp SCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHH-HHHTCEEEEEC---SSCCH-HHHHHHTEEEEE
T ss_pred CCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEE---ChhhH-HHHHHcCCCEEE
Confidence 68887754443333 334446889999999999944555555555 45688766665 23333 345678998888
No 113
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=28.45 E-value=1.6e+02 Score=28.34 Aligned_cols=63 Identities=11% Similarity=-0.010 Sum_probs=31.7
Q ss_pred EEEeCCchhhHHH-HHHHHhcCCEEeeccCCCChH--HHHHHHhhcCccEEEecCCChhHHhhcCC
Q 010568 107 GIYGVNCPEWIIG-MEACNALGLHCVPLYDTLGAG--AVEFIICHSGVSIAFVEEKKIPEMLKTFP 169 (507)
Q Consensus 107 ~i~~~n~~~~~~~-~lA~~~~G~~~v~l~~~~~~~--~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 169 (507)
+++..+..+.+.+ +.++..-|-.++.-++.+... .+...+...++++++++......+.+.+.
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~ 165 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACD 165 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCC
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhC
Confidence 4445555444433 334445555555445544322 12225566677777776655555555443
No 114
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=28.35 E-value=1.8e+02 Score=27.21 Aligned_cols=60 Identities=12% Similarity=0.075 Sum_probs=39.9
Q ss_pred HHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCC-EEeeccCCCChHHHHHHHhhcCccEEEe
Q 010568 93 NAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGL-HCVPLYDTLGAGAVEFIICHSGVSIAFV 156 (507)
Q Consensus 93 ~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 156 (507)
+.|...++++|++|+|...-..-.+++.+|- ..|+ .++.+.. +++. ..+++..+++.++-
T Consensus 173 ~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~-~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 173 HGVDLSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTR--QATK-RRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECS--CHHH-HHHHHHHTCSEEEC
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHHHHHcCCCEEEC
Confidence 3455678999999999887444555555544 6788 6666654 3444 34667788887764
No 115
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=28.21 E-value=2e+02 Score=26.58 Aligned_cols=78 Identities=9% Similarity=-0.077 Sum_probs=50.0
Q ss_pred EeHHHHHHHHHH---HHHHHHHC--CCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccE
Q 010568 79 KTYKEVYDLVIK---VVNAIRTC--GVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSI 153 (507)
Q Consensus 79 ~Ty~el~~~~~~---~a~~L~~~--gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 153 (507)
+++.+....... ..+.|.+. ++++|++|+|...-..-.+++.+|-..-|+.++.++. +.+.+ .+++..+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~~-~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDRL-ALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHHH-HHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHH-HHHHHcCCCE
Confidence 566665433322 22445554 7899999999987556666776666554677776654 34444 4567889988
Q ss_pred EEecCC
Q 010568 154 AFVEEK 159 (507)
Q Consensus 154 vi~~~~ 159 (507)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 876544
No 116
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=27.94 E-value=1.8e+02 Score=27.29 Aligned_cols=62 Identities=18% Similarity=0.152 Sum_probs=40.3
Q ss_pred HHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecC
Q 010568 93 NAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 93 ~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
+.|.+.++++|++|+|...-.+-..++.+|- ..|+.++.+.. +++.+. .++..+++.++-..
T Consensus 185 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~Vi~~~~--~~~~~~-~a~~lGa~~vi~~~ 246 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTT--SEAKRE-AAKALGADEVVNSR 246 (369)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--SGGGHH-HHHHHTCSEEEETT
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHH-HHHHcCCcEEeccc
Confidence 4456678999999999987445556666654 46887655554 344443 34567888776443
No 117
>1zjc_A Aminopeptidase AMPS; metallopeptidase, hydrolase; 1.80A {Staphylococcus aureus subsp} SCOP: e.60.1.1
Probab=27.77 E-value=94 Score=30.03 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHC--CCCCCCEEEEEeCCc-hh-hHHHHHHHHhcCCEEeecc
Q 010568 84 VYDLVIKVVNAIRTC--GVEERGKCGIYGVNC-PE-WIIGMEACNALGLHCVPLY 134 (507)
Q Consensus 84 l~~~~~~~a~~L~~~--gv~~gd~V~i~~~n~-~~-~~~~~lA~~~~G~~~v~l~ 134 (507)
+..+..++|..|.+. .+++|+.|.|..+-. .+ .-++.-++.++|+.++.+.
T Consensus 7 ~~~~l~k~A~~lV~~~~~lq~Ge~VlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 61 (418)
T 1zjc_A 7 YKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVV 61 (418)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 466888899988874 679999999988755 22 3344556778898777554
No 118
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=27.73 E-value=1.6e+02 Score=27.43 Aligned_cols=53 Identities=6% Similarity=-0.028 Sum_probs=25.3
Q ss_pred CCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC-------CChHHHHHHHhhcCccEEEe
Q 010568 101 EERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT-------LGAGAVEFIICHSGVSIAFV 156 (507)
Q Consensus 101 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~ 156 (507)
++||.|.+..+....+ ..++...|+.++.++.. .+.+++...++..++++|++
T Consensus 107 ~~gd~vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i 166 (391)
T 3dzz_A 107 SPGDQILVQEPVYNMF---YSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF 166 (391)
T ss_dssp CTTCEEEECSSCCHHH---HHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred CCCCeEEECCCCcHHH---HHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence 4566555544433332 22344555555544431 45555666555444555544
No 119
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=27.71 E-value=2.2e+02 Score=26.60 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=41.7
Q ss_pred HHHHHCCCC-CCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecC
Q 010568 93 NAIRTCGVE-ERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 93 ~~L~~~gv~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
+.|.+.+++ +|++|+|...-.+-..++.+|- ..|+.++.+.. +.+.+....+..+++.++...
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~~~ 240 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLVSR 240 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEETT
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEecc
Confidence 445667888 9999999886445555555554 56887665554 455565555578888776443
No 120
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=27.66 E-value=1.8e+02 Score=26.89 Aligned_cols=9 Identities=22% Similarity=0.622 Sum_probs=3.7
Q ss_pred hcCccEEEe
Q 010568 148 HSGVSIAFV 156 (507)
Q Consensus 148 ~~~~~~vi~ 156 (507)
..+++++.+
T Consensus 111 ~~g~~~~~v 119 (384)
T 1eg5_A 111 MKGFKVKYV 119 (384)
T ss_dssp HTTCEEEEC
T ss_pred hcCCEEEEE
Confidence 334444443
No 121
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=27.48 E-value=1.9e+02 Score=26.78 Aligned_cols=73 Identities=15% Similarity=0.111 Sum_probs=46.1
Q ss_pred EeHHHHHHHHHHH---HHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEE
Q 010568 79 KTYKEVYDLVIKV---VNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAF 155 (507)
Q Consensus 79 ~Ty~el~~~~~~~---a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 155 (507)
+++.+........ .+.|.+.++++|++|+|...-.+-.+++.+|- ..|+.++.+..+ ++.+. +++..+++.++
T Consensus 150 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~--~~~~~-~~~~lGa~~v~ 225 (348)
T 3two_A 150 APLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARN--EHKKQ-DALSMGVKHFY 225 (348)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSS--STTHH-HHHHTTCSEEE
T ss_pred CCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCC--HHHHH-HHHhcCCCeec
Confidence 6676654322221 24566678999999999876445555555554 568877766543 33333 45678898888
No 122
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=27.18 E-value=1.6e+02 Score=27.52 Aligned_cols=78 Identities=8% Similarity=-0.042 Sum_probs=46.8
Q ss_pred EeHHHHHHHHH--HHH-HHHHH-CCCCCC-CEEEEEeCCc-hhhHHHHHHHHhcCCEEeeccCCCCh-HHHHHHHhhcCc
Q 010568 79 KTYKEVYDLVI--KVV-NAIRT-CGVEER-GKCGIYGVNC-PEWIIGMEACNALGLHCVPLYDTLGA-GAVEFIICHSGV 151 (507)
Q Consensus 79 ~Ty~el~~~~~--~~a-~~L~~-~gv~~g-d~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~-~~l~~~l~~~~~ 151 (507)
+++.+...... ..| +.|.+ .++++| ++|+|....+ +-.+++.+|- ..|+.++.+...... ++....++..++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (364)
T 1gu7_A 139 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGK-LLNFNSISVIRDRPNLDEVVASLKELGA 217 (364)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHH-HHTCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCccccHHHHHHHHhcCC
Confidence 67776543321 122 34555 379999 9999998744 5555665555 568865555432222 334455578888
Q ss_pred cEEEec
Q 010568 152 SIAFVE 157 (507)
Q Consensus 152 ~~vi~~ 157 (507)
+.+|-.
T Consensus 218 ~~vi~~ 223 (364)
T 1gu7_A 218 TQVITE 223 (364)
T ss_dssp SEEEEH
T ss_pred eEEEec
Confidence 887753
No 123
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=27.17 E-value=1.5e+02 Score=27.75 Aligned_cols=58 Identities=12% Similarity=0.012 Sum_probs=30.1
Q ss_pred HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC-----CChHHHHHHHhhcCccEEEec
Q 010568 96 RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT-----LGAGAVEFIICHSGVSIAFVE 157 (507)
Q Consensus 96 ~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 157 (507)
+..++++||.|.+..+...... -++...|+.++.++.. .+.+++...++. ++++|++.
T Consensus 72 ~~~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 134 (393)
T 1mdo_A 72 MALGIGEGDEVITPSMTWVSTL---NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 134 (393)
T ss_dssp HHTTCCTTCEEEEESSSCHHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred HHcCCCCCCEEEeCCCccHhHH---HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEe
Confidence 3344667777766655544432 3345566655544321 345566655543 45555543
No 124
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=26.83 E-value=44 Score=30.10 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=20.2
Q ss_pred HHHHHHHHHCCCCCCCEEEEEeCC
Q 010568 89 IKVVNAIRTCGVEERGKCGIYGVN 112 (507)
Q Consensus 89 ~~~a~~L~~~gv~~gd~V~i~~~n 112 (507)
..+.+.|+++||++||.|.+...-
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl 41 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSL 41 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECT
T ss_pred HHHHHHHHHcCCCCCCEEEEEech
Confidence 345778999999999999998764
No 125
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=26.75 E-value=72 Score=28.33 Aligned_cols=61 Identities=8% Similarity=0.064 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchh
Q 010568 48 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPE 115 (507)
Q Consensus 48 ~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~ 115 (507)
.++++-.+..|+...++.. |.....+...++.++.+++.+.++.|.+.|. |.|+ +.-|+..
T Consensus 14 tv~~~l~~~lP~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~---d~iv-iaCNTa~ 74 (255)
T 2jfz_A 14 SVLKSLLKARLFDEIIYYG---DSARVPYGTKDPTTIKQFGLEALDFFKPHEI---ELLI-VACNTAS 74 (255)
T ss_dssp HHHHHHHHTTCCSEEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHGGGCC---SCEE-ECCHHHH
T ss_pred HHHHHHHHHCCCCCEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CEEE-EeCchhh
Confidence 3455566678999888887 7766666667999999999999999998776 3344 4444554
No 126
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=26.65 E-value=94 Score=23.80 Aligned_cols=75 Identities=9% Similarity=-0.066 Sum_probs=44.6
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 010568 32 AKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIY 109 (507)
Q Consensus 32 ~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~ 109 (507)
+..+.....+......+-+....+.+|+....+..|. |.. +. ..+-+.==.+|+..++.+|.+.|+.+.+++.+.
T Consensus 21 F~~~s~~L~~~~~~~L~~~a~~l~~~~~~~i~I~Ght-D~~-g~-~~~N~~LS~~RA~aV~~~L~~~Gv~~~~ri~~~ 95 (123)
T 3oon_A 21 FYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHT-EQF-GL-EEEMHELSEKRARAIGNYLIKMKVKDKDQILFK 95 (123)
T ss_dssp BCTTSCCBCGGGHHHHHHHHHHHHHSCSCCEEEEECC-CSC-CC-HHHHHHHHHHHHHHHHHHHHHTTSSCGGGEEEE
T ss_pred eCCCChhcCHHHHHHHHHHHHHHHHCCCceEEEEEEe-CCC-CC-hHHHHHHHHHHHHHHHHHHHHcCCCchHeEEEE
Confidence 3334444445556666677777888998555444321 221 11 123333445789999999999999745555543
No 127
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=25.77 E-value=1.8e+02 Score=27.11 Aligned_cols=74 Identities=11% Similarity=-0.027 Sum_probs=46.1
Q ss_pred EeHHHHHHHHHHH---HHHH-HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIKV---VNAI-RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~~---a~~L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+........ .+.| ...++++|++|+|...-.+-..++.+| ...|+.++.+.. +.+.+. +++..+++.+
T Consensus 162 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~v 237 (363)
T 3uog_A 162 LDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSS--SREKLD-RAFALGADHG 237 (363)
T ss_dssp SCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEES--CHHHHH-HHHHHTCSEE
T ss_pred CCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEec--CchhHH-HHHHcCCCEE
Confidence 6777765432222 2334 346899999999998433444444444 567887776654 444444 3677888887
Q ss_pred Ee
Q 010568 155 FV 156 (507)
Q Consensus 155 i~ 156 (507)
+-
T Consensus 238 i~ 239 (363)
T 3uog_A 238 IN 239 (363)
T ss_dssp EE
T ss_pred Ec
Confidence 75
No 128
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=25.67 E-value=1.9e+02 Score=28.09 Aligned_cols=77 Identities=12% Similarity=0.073 Sum_probs=47.6
Q ss_pred EeHHHHHHHHHHHHH---HHHH---CCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCcc
Q 010568 79 KTYKEVYDLVIKVVN---AIRT---CGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVS 152 (507)
Q Consensus 79 ~Ty~el~~~~~~~a~---~L~~---~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 152 (507)
+++.+.......... .|.. .++++|++|+|....+.--..++..+...|+.++.+.. +.+.+. +++..+++
T Consensus 199 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~--~~~~~~-~~~~lGa~ 275 (456)
T 3krt_A 199 LSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS--SPQKAE-ICRAMGAE 275 (456)
T ss_dssp SCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHHTCC
T ss_pred CCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC--CHHHHH-HHHhhCCc
Confidence 677776533222222 2322 47899999999988554444444444567887666653 455554 55788988
Q ss_pred EEEecC
Q 010568 153 IAFVEE 158 (507)
Q Consensus 153 ~vi~~~ 158 (507)
.+|...
T Consensus 276 ~vi~~~ 281 (456)
T 3krt_A 276 AIIDRN 281 (456)
T ss_dssp EEEETT
T ss_pred EEEecC
Confidence 877543
No 129
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=25.44 E-value=2.5e+02 Score=26.25 Aligned_cols=58 Identities=12% Similarity=-0.037 Sum_probs=34.1
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC----CChHHHHHHHhhcCccEEEecC
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT----LGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
+++||.|.+..+...... ..-++...|+.++.++.. .+.+++...++..++++|+...
T Consensus 83 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 144 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFGYL-LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVH 144 (416)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEc
Confidence 578888877776543311 223455667665544432 3667777777755666666654
No 130
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=25.32 E-value=2.7e+02 Score=25.94 Aligned_cols=55 Identities=2% Similarity=-0.083 Sum_probs=30.7
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhc---CccEEEecC
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHS---GVSIAFVEE 158 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~vi~~~ 158 (507)
.++||.|.+..+....+. -++...|+.++.++. .+.+++...++.. ++++|++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~---~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASII---DGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHH---HHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 456777766655544433 234556766666554 4556666666554 455555443
No 131
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=25.11 E-value=2.6e+02 Score=25.62 Aligned_cols=56 Identities=11% Similarity=0.029 Sum_probs=32.5
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeecc--CC----CChHHHHHHHhh----cCccEEEecC
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLY--DT----LGAGAVEFIICH----SGVSIAFVEE 158 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~----~~~~~l~~~l~~----~~~~~vi~~~ 158 (507)
+++||.|.+..+........ +...|+.++.++ .. .+.+++...++. -+++++++..
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 45788777766655444333 566777666655 22 256677777764 2455555543
No 132
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=25.05 E-value=49 Score=30.03 Aligned_cols=29 Identities=14% Similarity=0.076 Sum_probs=22.9
Q ss_pred EEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCC
Q 010568 77 VWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVN 112 (507)
Q Consensus 77 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n 112 (507)
+.+|-.+| .+.|+++||++||.|.+...-
T Consensus 20 ~~~T~~~L-------~~~L~~LGI~~Gd~llVHsSL 48 (286)
T 3sma_A 20 ELVTRDRL-------ASDLAALGVRPGGVLLVHASL 48 (286)
T ss_dssp CEECHHHH-------HHHHHHHTCCTTCEEEEEECS
T ss_pred CCcCHHHH-------HHHHHHcCCCCCCEEEEEech
Confidence 34776665 568999999999999998663
No 133
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=24.86 E-value=49 Score=29.87 Aligned_cols=22 Identities=5% Similarity=0.117 Sum_probs=19.0
Q ss_pred HHHHHHHCCCCCCCEEEEEeCC
Q 010568 91 VVNAIRTCGVEERGKCGIYGVN 112 (507)
Q Consensus 91 ~a~~L~~~gv~~gd~V~i~~~n 112 (507)
+.+.|+++||++||.|.+...-
T Consensus 18 L~~~L~~LGI~~Gd~llVHsSl 39 (273)
T 2nyg_A 18 ITEDLKALGLKKGMTVLVHSSL 39 (273)
T ss_dssp HHHHHHHHTCCTTCEEEEEECS
T ss_pred HHHHHHHcCCCCCCEEEEEech
Confidence 5678999999999999998753
No 134
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=24.69 E-value=2e+02 Score=26.55 Aligned_cols=77 Identities=13% Similarity=0.134 Sum_probs=47.2
Q ss_pred EeHHHHHHHHHHHHH---HH-HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIKVVN---AI-RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~~a~---~L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+.......++. .| ...++++|++|+|....+.--..+...+...|+.++.+.. +.+.+ ..++..+++.+
T Consensus 132 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~-~~~~~~ga~~v 208 (342)
T 4eye_A 132 LDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN--RTAAT-EFVKSVGADIV 208 (342)
T ss_dssp SCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SGGGH-HHHHHHTCSEE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHH-HHHHhcCCcEE
Confidence 677776544444333 34 2357899999999988554444444444567887776654 33333 34556788877
Q ss_pred EecC
Q 010568 155 FVEE 158 (507)
Q Consensus 155 i~~~ 158 (507)
+...
T Consensus 209 ~~~~ 212 (342)
T 4eye_A 209 LPLE 212 (342)
T ss_dssp EESS
T ss_pred ecCc
Confidence 6443
No 135
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=24.60 E-value=1.6e+02 Score=27.26 Aligned_cols=75 Identities=9% Similarity=-0.031 Sum_probs=46.4
Q ss_pred EeHHHHHHHHHH---HHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCC-EEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIK---VVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGL-HCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~---~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+....... ..+.+...++++|++|+|...-.+-.+++.+| ...|+ .++.++. +.+. ..+++..+++.+
T Consensus 140 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~--~~~~-~~~~~~lGa~~v 215 (352)
T 3fpc_A 140 IPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGS--RKHC-CDIALEYGATDI 215 (352)
T ss_dssp SCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHH-HTTTCSSEEEECC--CHHH-HHHHHHHTCCEE
T ss_pred CCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEECC--CHHH-HHHHHHhCCceE
Confidence 666665432221 12345667899999999997544455555554 56787 5665654 3333 356678888887
Q ss_pred Eec
Q 010568 155 FVE 157 (507)
Q Consensus 155 i~~ 157 (507)
|..
T Consensus 216 i~~ 218 (352)
T 3fpc_A 216 INY 218 (352)
T ss_dssp ECG
T ss_pred EcC
Confidence 753
No 136
>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A
Probab=23.93 E-value=1.8e+02 Score=22.06 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=38.4
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 010568 39 PIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGI 108 (507)
Q Consensus 39 ~~~~~~tl~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i 108 (507)
..+......+.+....+.+|+....+..+. |.. +. ..+-+.==.+|+..++.+|.+.|+.+. +|.+
T Consensus 17 l~~~~~~~L~~ia~~l~~~p~~~i~I~Ght-D~~-G~-~~~N~~LS~~RA~aV~~~L~~~Gi~~~-ri~~ 82 (118)
T 2hqs_H 17 IRSDFAQMLDAHANFLRSNPSYKVTVEGHA-DER-GT-PEYNISLGERRANAVKMYLQGKGVSAD-QISI 82 (118)
T ss_dssp CCGGGHHHHHHHHHHHHHCTTCCEEEEECC-CSS-SC-HHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEE
T ss_pred cCHHHHHHHHHHHHHHHhCCCcEEEEEEEC-CCC-CC-HHHHHHHHHHHHHHHHHHHHHcCCCHH-HEEE
Confidence 334445555666667778887555444321 221 11 123333346689999999999998654 4433
No 137
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=23.90 E-value=2.3e+02 Score=25.48 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh
Q 010568 47 WDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW 116 (507)
Q Consensus 47 ~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~ 116 (507)
..++++..+..|+...+++. |...-.+-..++.++.+++.+.++.|.+.|. | ..++.-|+...
T Consensus 35 ltv~~~i~~~~P~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~---d-~IVIaCNTas~ 97 (286)
T 2jfq_A 35 LTVAKEIMRQLPNETIYYLG---DIGRCPYGPRPGEQVKQYTVEIARKLMEFDI---K-MLVIACNTATA 97 (286)
T ss_dssp HHHHHHHHHHCTTCCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHTTSCC---S-EEEECCHHHHH
T ss_pred HHHHHHHHHHCCCccEEEec---cCCCCCcCCCCHHHHHHHHHHHHHHHHHCCC---C-EEEEeCCchhH
Confidence 35677777789998888776 6655555567999999999999999988765 3 44555556553
No 138
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=23.71 E-value=2.4e+02 Score=26.26 Aligned_cols=55 Identities=5% Similarity=0.003 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC-----CChHHHHHHHhhcCccEEEec
Q 010568 99 GVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT-----LGAGAVEFIICHSGVSIAFVE 157 (507)
Q Consensus 99 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 157 (507)
++++||.|.+..+....... ++...|+.++.++.. .+.+++...++. ++++|++.
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 67889988887666554443 455678876655432 356777776654 55666654
No 139
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=23.69 E-value=2.9e+02 Score=25.61 Aligned_cols=57 Identities=12% Similarity=0.010 Sum_probs=35.4
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccC----CCChHHHHHHHhhcCccEEEec
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYD----TLGAGAVEFIICHSGVSIAFVE 157 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~vi~~ 157 (507)
+++||.|.+..+....+. ..-++...|+.++.++. ..+.+++...++..++++|+..
T Consensus 90 ~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 150 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLT 150 (396)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 468888888777665542 22245566776655543 2566778777765466666664
No 140
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=23.40 E-value=2.5e+02 Score=25.98 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=47.6
Q ss_pred EeHHHHHHHHHHHHHH---H-HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIKVVNA---I-RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~~a~~---L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+.......++.. | ...++++|++|+|....+.--.++...+...|+.++.+.. +.+.+. .++..+++.+
T Consensus 140 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~ 216 (353)
T 4dup_A 140 YDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG--STGKCE-ACERLGAKRG 216 (353)
T ss_dssp CCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHHTCSEE
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHH-HHHhcCCCEE
Confidence 6777765444443333 3 2358999999999966664444444445577987766654 444443 4566788877
Q ss_pred Eec
Q 010568 155 FVE 157 (507)
Q Consensus 155 i~~ 157 (507)
+..
T Consensus 217 ~~~ 219 (353)
T 4dup_A 217 INY 219 (353)
T ss_dssp EET
T ss_pred EeC
Confidence 643
No 141
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=23.25 E-value=2.9e+02 Score=25.30 Aligned_cols=64 Identities=16% Similarity=0.052 Sum_probs=41.0
Q ss_pred HHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCC-EEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 92 VNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGL-HCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 92 a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
...+...++++|++|+|..--..-.+++++|- ..|+ .++.++. +++. ..+++..+++.+|-..+
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak-~~G~~~vi~~~~--~~~k-~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAIQCAV-ALGAKSVTAIDI--SSEK-LALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHH-HHHHHHTTCSEEEETTT
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHHHHHH-HcCCcEEEEEec--hHHH-HHHHHHcCCeEEEeCCC
Confidence 34455678999999999976555555555554 4554 4455554 3333 45677889988886543
No 142
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=23.19 E-value=1.9e+02 Score=27.15 Aligned_cols=75 Identities=19% Similarity=0.154 Sum_probs=45.7
Q ss_pred EeHHHHHHHHHHHHH---HH-HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCC-EEeeccCCCChHHHHHHHhhcCccE
Q 010568 79 KTYKEVYDLVIKVVN---AI-RTCGVEERGKCGIYGVNCPEWIIGMEACNALGL-HCVPLYDTLGAGAVEFIICHSGVSI 153 (507)
Q Consensus 79 ~Ty~el~~~~~~~a~---~L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 153 (507)
+++.+.......++. .+ ...++++|++|+|...-.+-.+++.+| ...|+ .++.++.+ ++.+. +++..+++.
T Consensus 166 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a-~~~Ga~~Vi~~~~~--~~~~~-~a~~lGa~~ 241 (378)
T 3uko_A 166 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGA-KTAGASRIIGIDID--SKKYE-TAKKFGVNE 241 (378)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHH-HHHTCSCEEEECSC--TTHHH-HHHTTTCCE
T ss_pred CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCC--HHHHH-HHHHcCCcE
Confidence 577765543322222 23 336899999999997744555555555 45687 56666543 33333 567888888
Q ss_pred EEec
Q 010568 154 AFVE 157 (507)
Q Consensus 154 vi~~ 157 (507)
+|..
T Consensus 242 vi~~ 245 (378)
T 3uko_A 242 FVNP 245 (378)
T ss_dssp EECG
T ss_pred EEcc
Confidence 7754
No 143
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=22.98 E-value=1.3e+02 Score=28.04 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=36.7
Q ss_pred CCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCC
Q 010568 111 VNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKK 160 (507)
Q Consensus 111 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 160 (507)
..+-.-..+.++|.+.|.-++.+-|...+......++..++++++++...
T Consensus 83 SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 83 SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSD 132 (346)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 34555566667888999877666565555666778899999999998653
No 144
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=22.61 E-value=2.5e+02 Score=26.04 Aligned_cols=75 Identities=9% Similarity=-0.030 Sum_probs=44.8
Q ss_pred EeHHHHHHHHHHHHHH---H-HHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIKVVNA---I-RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~~a~~---L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+.......++.. | ...++++|++|+|....+.--..+...+...|+.++.+.. +.+.+... +..+++.+
T Consensus 135 ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~-~~~g~~~~ 211 (354)
T 2j8z_A 135 LTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG--SQKKLQMA-EKLGAAAG 211 (354)
T ss_dssp CCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--CHHHHHHH-HHHTCSEE
T ss_pred CCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHH-HHcCCcEE
Confidence 5777654333333333 3 2358999999999986554444444444567887666654 45555443 66677766
Q ss_pred Ee
Q 010568 155 FV 156 (507)
Q Consensus 155 i~ 156 (507)
+-
T Consensus 212 ~~ 213 (354)
T 2j8z_A 212 FN 213 (354)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 145
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=22.24 E-value=1.3e+02 Score=27.84 Aligned_cols=11 Identities=9% Similarity=0.489 Sum_probs=5.6
Q ss_pred hhcCccEEEec
Q 010568 147 CHSGVSIAFVE 157 (507)
Q Consensus 147 ~~~~~~~vi~~ 157 (507)
+..+++++.++
T Consensus 109 ~~~g~~~~~v~ 119 (382)
T 4eb5_A 109 QKQGFEVEYIP 119 (382)
T ss_dssp TTTTCEEEEEC
T ss_pred HhCCcEEEEec
Confidence 34455555554
No 146
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=22.06 E-value=2.5e+02 Score=26.01 Aligned_cols=58 Identities=7% Similarity=-0.114 Sum_probs=33.4
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeecc--CC--CChHHHHHHHhh-cCccEEEecC
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLY--DT--LGAGAVEFIICH-SGVSIAFVEE 158 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~--~~~~~l~~~l~~-~~~~~vi~~~ 158 (507)
+++||.|.+..+...-.. ..-.+...|+.++.++ +. .+.+++...++. -++++|+...
T Consensus 80 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 142 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCH 142 (392)
T ss_dssp CCTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEec
Confidence 468898888776554332 1122234566554443 32 467788888764 3566666654
No 147
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=22.05 E-value=2.6e+02 Score=25.18 Aligned_cols=63 Identities=14% Similarity=0.165 Sum_probs=46.8
Q ss_pred HHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhh
Q 010568 47 WDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW 116 (507)
Q Consensus 47 ~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~ 116 (507)
..++++-.+..|+...+.+. |...-.+-..++.++.+++.+.++.|.+.|. | ..++.-|+...
T Consensus 37 ltv~~~i~~~~P~~~~iy~~---D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~---d-~IVIACNTas~ 99 (290)
T 2vvt_A 37 LTVLKEALKQLPNERLIYLG---DTARCPYGPRPAEQVVQFTWEMADFLLKKRI---K-MLVIACNTATA 99 (290)
T ss_dssp HHHHHHHHHHCTTSCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC---S-EEEECCHHHHH
T ss_pred HHHHHHHHHHCCCccEEEec---ccccCCCCCCCHHHHHHHHHHHHHHHHHCCC---C-EEEEeCcchhH
Confidence 45777777889999888776 6655555457899999999999999988765 3 45555556553
No 148
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=21.96 E-value=2e+02 Score=26.74 Aligned_cols=74 Identities=19% Similarity=0.080 Sum_probs=45.5
Q ss_pred EeHHHHHHHHHHHH---HHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCC-EEeeccCCCChHHHHHHHhhcCccEE
Q 010568 79 KTYKEVYDLVIKVV---NAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGL-HCVPLYDTLGAGAVEFIICHSGVSIA 154 (507)
Q Consensus 79 ~Ty~el~~~~~~~a---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~v 154 (507)
+++.+... ..-++ +.|...++++|++|+|...-.+-..++.+|- ..|+ .++.+.. +.+.+ .+++..+++.+
T Consensus 146 l~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~v 220 (356)
T 1pl8_A 146 VTFEEGAL-IEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDL--SATRL-SKAKEIGADLV 220 (356)
T ss_dssp SCHHHHHH-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHHH-HHHHHTTCSEE
T ss_pred CCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHHH-HHHHHhCCCEE
Confidence 57766442 22222 3345568999999999886445556666554 5687 6666654 34433 44567888876
Q ss_pred Eec
Q 010568 155 FVE 157 (507)
Q Consensus 155 i~~ 157 (507)
+..
T Consensus 221 i~~ 223 (356)
T 1pl8_A 221 LQI 223 (356)
T ss_dssp EEC
T ss_pred EcC
Confidence 643
No 149
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=21.85 E-value=2e+02 Score=26.69 Aligned_cols=75 Identities=13% Similarity=0.044 Sum_probs=45.0
Q ss_pred EeHHHHHHHHHH---HHHHHHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEE
Q 010568 79 KTYKEVYDLVIK---VVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAF 155 (507)
Q Consensus 79 ~Ty~el~~~~~~---~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 155 (507)
+++.+....... ..+.|.+.++++|++|+|...-.+-..++.+|- ..|+.++.+..+ .+.+ .+++..+++.++
T Consensus 153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak-~~Ga~Vi~~~~~--~~~~-~~~~~lGa~~v~ 228 (360)
T 1piw_A 153 IPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISRS--SRKR-EDAMKMGADHYI 228 (360)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESS--STTH-HHHHHHTCSEEE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEcCC--HHHH-HHHHHcCCCEEE
Confidence 567664322211 124455678999999999998445555555554 468876666542 2233 234557888776
Q ss_pred ec
Q 010568 156 VE 157 (507)
Q Consensus 156 ~~ 157 (507)
-.
T Consensus 229 ~~ 230 (360)
T 1piw_A 229 AT 230 (360)
T ss_dssp EG
T ss_pred cC
Confidence 43
No 150
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=21.56 E-value=2.5e+02 Score=25.01 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=47.1
Q ss_pred HHHHHHHHHhCCCCCceeeEeeccCcCCceEEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCchhhH
Q 010568 47 WDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWI 117 (507)
Q Consensus 47 ~~~l~~~~~~~pd~~a~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 117 (507)
..++++-.+..|+...+++. |.....+...++.++..++.+.++.|.+.|. | ..++.-|+...+
T Consensus 25 ltv~~~i~~~~P~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~---d-~iviaCNTas~~ 88 (273)
T 2oho_A 25 LTVVCELIRQLPHEKIVYIG---DSARAPYGPRPKKQIKEYTWELVNFLLTQNV---K-MIVFACNTATAV 88 (273)
T ss_dssp HHHHHHHHHHCTTCCEEEEE---CGGGCCCTTSCHHHHHHHHHHHHHHHHTTTC---S-EEEECCHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---C-EEEEeCchHhHH
Confidence 45777777889998888776 6655555557899999999999999988765 3 445555565543
No 151
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=21.41 E-value=4.4e+02 Score=25.42 Aligned_cols=55 Identities=9% Similarity=-0.060 Sum_probs=39.6
Q ss_pred EEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCCC
Q 010568 106 CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKK 160 (507)
Q Consensus 106 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 160 (507)
..+....+-.-..+.++|.+.|.-++.+-|...+..-...++..++++++++..+
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~ 216 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDY 216 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 4455555556666777788899877666555555566677889999999998754
No 152
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=21.01 E-value=1.5e+02 Score=27.44 Aligned_cols=12 Identities=8% Similarity=0.526 Sum_probs=5.9
Q ss_pred HhhcCccEEEec
Q 010568 146 ICHSGVSIAFVE 157 (507)
Q Consensus 146 l~~~~~~~vi~~ 157 (507)
+...+++++.++
T Consensus 108 ~~~~g~~~~~v~ 119 (382)
T 4hvk_A 108 LQKQGFEVEYIP 119 (382)
T ss_dssp HHHTTCEEEEEC
T ss_pred HHhcCCEEEEec
Confidence 334455555544
No 153
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=21.01 E-value=3.6e+02 Score=22.65 Aligned_cols=57 Identities=12% Similarity=-0.076 Sum_probs=42.6
Q ss_pred CCEEEEEeCCc----hhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCccEEEecCC
Q 010568 103 RGKCGIYGVNC----PEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK 159 (507)
Q Consensus 103 gd~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 159 (507)
+.+|.+.+... .-..++...+...|.-++-+....+.+++...+...++++|..+..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 33566655442 3334455555678999999999999999999999999999988763
No 154
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=20.64 E-value=2.7e+02 Score=25.59 Aligned_cols=55 Identities=16% Similarity=0.144 Sum_probs=37.0
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeecc--C--CCChHHHHHHHhhcCccEEEec
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLY--D--TLGAGAVEFIICHSGVSIAFVE 157 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~--~~~~~~l~~~l~~~~~~~vi~~ 157 (507)
+++||.|.+..+....+... +...|+.++.++ + ..+.+++...++..++++|++.
T Consensus 106 ~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYAMS---AQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSCHH---HHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHH---HHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 57889888877766554433 556777665544 3 3467888888877677777764
No 155
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=20.43 E-value=3.1e+02 Score=26.05 Aligned_cols=22 Identities=5% Similarity=-0.117 Sum_probs=10.1
Q ss_pred HHHHHHhhC-CcEEeecccccCc
Q 010568 402 ETFLRVVAC-AHVLQGYGLTETC 423 (507)
Q Consensus 402 ~~~~~~~~~-~~v~~~YG~tE~~ 423 (507)
.+.+.+.+. ..+....|..|+.
T Consensus 344 ~~~~~~~l~~~~~~~s~G~~~sl 366 (414)
T 3ndn_A 344 AFEVLDKMRLIDISNNLGDAKSL 366 (414)
T ss_dssp HHHHHHHCSSSEECSCCSCSSCE
T ss_pred HHHHHHhCccceEcCCCCCCCce
Confidence 344444333 2344456666653
No 156
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=20.39 E-value=3.6e+02 Score=25.03 Aligned_cols=58 Identities=7% Similarity=-0.081 Sum_probs=33.8
Q ss_pred CCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC----CChHHHHHHHhhcCccEEEecC
Q 010568 100 VEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT----LGAGAVEFIICHSGVSIAFVEE 158 (507)
Q Consensus 100 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 158 (507)
+++||.|.+..+...-.. ..-++...|+.++.++.. .+.+++...++..++++|+...
T Consensus 85 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 146 (411)
T 3nnk_A 85 IRPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQ 146 (411)
T ss_dssp CCTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeC
Confidence 568888877765443211 233445567655544332 2567777777765677776654
No 157
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=20.37 E-value=2.2e+02 Score=27.51 Aligned_cols=75 Identities=11% Similarity=0.011 Sum_probs=46.0
Q ss_pred EeHHHHHHHHHHHHH---HHH---HCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCCCChHHHHHHHhhcCcc
Q 010568 79 KTYKEVYDLVIKVVN---AIR---TCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVS 152 (507)
Q Consensus 79 ~Ty~el~~~~~~~a~---~L~---~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 152 (507)
+++.+........+. .|. ..++++|++|+|....+.--..++..+...|+.++.+.. +.+.+. .++..+++
T Consensus 191 ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~--~~~~~~-~~~~lGa~ 267 (447)
T 4a0s_A 191 LTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS--SAQKEA-AVRALGCD 267 (447)
T ss_dssp SCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCC
T ss_pred CCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHH-HHHhcCCC
Confidence 677776543333332 232 258899999999988554444444444567887666653 455554 45677887
Q ss_pred EEEe
Q 010568 153 IAFV 156 (507)
Q Consensus 153 ~vi~ 156 (507)
.++-
T Consensus 268 ~~i~ 271 (447)
T 4a0s_A 268 LVIN 271 (447)
T ss_dssp CEEE
T ss_pred EEEe
Confidence 6663
No 158
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=20.36 E-value=1.7e+02 Score=27.74 Aligned_cols=58 Identities=9% Similarity=-0.008 Sum_probs=29.5
Q ss_pred HHHCCCCCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccCC-----CChHHHHHHHhhcCccEEEe
Q 010568 95 IRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDT-----LGAGAVEFIICHSGVSIAFV 156 (507)
Q Consensus 95 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 156 (507)
+..+++++||.|.+..+...... .++...|+.++.++.. .+.+++...++. ++++|+.
T Consensus 74 ~~~~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 136 (418)
T 2c81_A 74 LEALGIGEGDEVIVPSLTWIATA---TAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIP 136 (418)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECC
T ss_pred HHHcCCCCcCEEEECCCccHhHH---HHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEE
Confidence 33445667777776666554443 2345667665554432 244444444432 3445544
No 159
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=20.06 E-value=3.8e+02 Score=24.59 Aligned_cols=53 Identities=9% Similarity=-0.026 Sum_probs=25.1
Q ss_pred CCCCEEEEEeCCchhhHHHHHHHHhcCCEEeeccC----CCChHHHHHHHhhcCccEEEe
Q 010568 101 EERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYD----TLGAGAVEFIICHSGVSIAFV 156 (507)
Q Consensus 101 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~vi~ 156 (507)
++||.|.+..+....+.. ++...|+.++.++. ..+.+++...++..++++|++
T Consensus 114 ~~gd~Vl~~~~~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~ 170 (369)
T 3cq5_A 114 GPGRTALGFQPSYSMHPI---LAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFV 170 (369)
T ss_dssp STTCEEEEEESSCTHHHH---HHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEcCCChHHHHH---HHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEE
Confidence 456666665554443322 33445554444332 224455555554434555554
Done!